BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004425
         (754 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  927 bits (2397), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/755 (61%), Positives = 568/755 (75%), Gaps = 19/755 (2%)

Query: 1   MHTLLPANLLQPPFKSQQSLPPLKKKVPINTFS-------------PNPKSQVAYLCSIS 47
           M T  PA LL    K Q S P L+ K P + F+              NPK  V    +IS
Sbjct: 1   MTTFFPATLLPCISKPQFSFPQLEIKTPNSIFTCSSSKPVHNNNNLQNPKPNVTRYSTIS 60

Query: 48  SVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN 107
           +    E TLLFNDWP+L+KISIGS D  LGQAVH++L+K+GSQ+DTF+ NN++NLY KFN
Sbjct: 61  N----EDTLLFNDWPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFN 116

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE 167
           RLD+AQK+FD M  R+ ITWTSLIKGYL+D D++S   IA DM++  E FNEHTC+VIL+
Sbjct: 117 RLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQ 176

Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
           ACS  +DRI GEQIH F IKSGF+ NVFVGTSLI+MY  SG F  AE VF  + +KD+RC
Sbjct: 177 ACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRC 236

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
           +NFMILEY +AG    A  VF +LL+  FEP DYTFTN+IS C  +LGVEEGKQL GLA 
Sbjct: 237 LNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAF 296

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           K+G + E SVGNAI+TMYG  GM +EAERMF ++SE+NLISWTALISGY RSG+G KA++
Sbjct: 297 KYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVD 356

Query: 348 GFLEFLD-LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
            FL   D LGI  DS+ L  ++D CS C+NLELGLQ+HGF +K G   DV + TALVD+Y
Sbjct: 357 AFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLY 416

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
           AK   L+SAR++ D  S K  A FNAIL+GF+E  + DEED M+LF+Q RLAG++PD VT
Sbjct: 417 AKCEKLQSARIVFDHLSNKGIASFNAILAGFLES-SGDEEDPMILFNQLRLAGVKPDMVT 475

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           FSRLLSL A+QA L +GRS HAY++KTG+  ++ V N++I+MYAKCGSI+ A Q+F  ++
Sbjct: 476 FSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMN 535

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
            RD +SWNA++SAYALHG  + +L LFEEMKR+GF PD+ +IL +LQAC YSGL + GIC
Sbjct: 536 CRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGIC 595

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
           LFN +E  YG++P+LEH+ACM DLLGRAG LSEAM++I  SPF +S LLWRTLV+V KL 
Sbjct: 596 LFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLH 655

Query: 647 ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
            N  F  LASK LLDL P +AGS+ILVSNMYA + M DEAAKVR  MNDL+  KEAG SW
Sbjct: 656 GNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAGSSW 715

Query: 707 IEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           IEID+K+HHFVAS KDHPES EIY++L+LL DEMK
Sbjct: 716 IEIDNKVHHFVASDKDHPESREIYTRLELLTDEMK 750


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  897 bits (2319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/755 (60%), Positives = 558/755 (73%), Gaps = 21/755 (2%)

Query: 4   LLPANLLQPPFKSQQ---------SLPPLKKKVPINT--------FSPNPKSQVAYLCSI 46
           L+P      PF+++          +  PLK + P NT         + +P S+  +   +
Sbjct: 8   LVPRAYAFSPFEAKPHSTEILNSPAFSPLKAR-PANTGFNSYPGHNAQDPNSKTTHSSMV 66

Query: 47  SSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF 106
              S S++  LFNDWPQL++ISIGSGDL LGQA+HAFL K G QND F  NNL+NLY KF
Sbjct: 67  YCNSDSDQNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKF 126

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL 166
           N+L  AQ +FD MLVR+ ITWT+LIKG+L   D ESV  IA +MY   E+FNEHTCSVIL
Sbjct: 127 NKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVIL 186

Query: 167 EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR 226
           +AC  LE+ + GEQIH F IK GF+ +VFVGTSLISMY   G    AE V+  LAYKDVR
Sbjct: 187 QACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVR 246

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
           C+NFMI EY KAG  E A  VF+HLL S  EPNDYTFTNVIS C  ++ VE  + LHG+ 
Sbjct: 247 CLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMC 306

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI 346
           +K G   EISVGNAIV++Y KHGM EEAE+ F  + ERNL+SWTAL+SGYV++G+G KA+
Sbjct: 307 IKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKAL 366

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
            GF + L+LG+  DS C AT++DGCS C NL LGLQ+HGF +K GY+ DV +GTAL+D+Y
Sbjct: 367 EGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLY 426

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
           AK   L+SAR++      K    FNAILSG+   I  DEED M LFSQ RLA ++PD VT
Sbjct: 427 AKCRKLRSARLVFHSLLDKNIVSFNAILSGY---IGADEEDAMALFSQLRLADIKPDSVT 483

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           F+RLLSLSA QACLV+G+ LHAY IKTG+ A+  VGNA+ITMYAKCGSI  A Q+F  ++
Sbjct: 484 FARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMN 543

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
             D +SWNA++SAYALHG G+ AL+LFEEMK+E F PD+I+IL VLQAC YSGL E G C
Sbjct: 544 YLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFC 603

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
           LFN++E  YG++P +EHFACMVDLLGRAG LSEAM+ IN SPFS SPLLWRTLV V KL 
Sbjct: 604 LFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLH 663

Query: 647 ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
            +  F  +ASK LLDL P++AGS+ILVSN+YAG GML+EAA+VRT MNDL++SKEAG SW
Sbjct: 664 GDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSW 723

Query: 707 IEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           IEID+K+H FVAS KDHPES+EIY+KLDLL  EMK
Sbjct: 724 IEIDNKVHQFVASDKDHPESKEIYAKLDLLKSEMK 758


>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
          Length = 638

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/634 (63%), Positives = 494/634 (77%), Gaps = 1/634 (0%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           MLVR+ ITWTSLIKGYLDD ++ES L IA +M++S E  NEHTCSVIL+ACS  + RIFG
Sbjct: 1   MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q H F IK GF+ NV VGTSLI+MY  S  F +AE VF  +A KDVRC NFMILEY +A
Sbjct: 61  QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G  E A  VF+++L++  +PNDYTFTN+IS C  +LG+EEG+Q  GL+ K+G + E S+G
Sbjct: 121 GNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIG 180

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NAI+ MYGK GM+ EAERMF A+++RNLISWTALISGY RSG G KA++ F+E    G+ 
Sbjct: 181 NAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVN 240

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            DSS L T++DGCS C NLELGLQ+HG  IK GY   V +GTALVD+YAK G+L SARM+
Sbjct: 241 FDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMV 300

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            DG S K  A FNAIL+GFME   D EED +VLF+  RL G++PD VTFSRLLSLSA+ +
Sbjct: 301 FDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHS 360

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L RGR  HAY+IKTG+ AD+ V NA+ITMYAKCGSI+ A ++F  ++D D +SWNAM+S
Sbjct: 361 TLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMIS 420

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           AYALHG G   LLLFEEM ++ FAPD+I+IL +LQAC YSGL   GI LFN +E  YG++
Sbjct: 421 AYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIK 480

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P+LEH+ACMVDLLGRAG LSEAM++IN SPFS+S LLWRTLV+V KL  +  F  LASK 
Sbjct: 481 PLLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKLASKY 540

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           LL+L P +AGS+ILVSNMYAG+ MLDEAAKVRT MNDL+LSKEAG SWIEID K+HHFVA
Sbjct: 541 LLELSPVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSKEAGTSWIEIDDKVHHFVA 600

Query: 719 SGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFEL 752
           SGKDHPES EIY++LDLL D+M+ +  D + F L
Sbjct: 601 SGKDHPESNEIYAELDLLRDDMRWRY-DVANFNL 633



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 175/363 (48%), Gaps = 7/363 (1%)

Query: 59  NDWPQLVKISIGSGDLKL--GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           ND+     IS   GDL +  G+       K G  N+T   N +IN+Y K      A+++F
Sbjct: 141 NDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMYGKKGMAREAERMF 200

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
             M  R+ I+WT+LI GY   GD +  +    +++     F+    + IL+ CS   +  
Sbjct: 201 SAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECRNLE 260

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---L 233
            G QIH   IK G+   V +GT+L+ +Y   G    A  VF GL+ K +   N ++   +
Sbjct: 261 LGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKRIASFNAILAGFM 320

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
           E ++ GE E    +F H      +P+  TF+ ++S+   +  +  G+  H  A+K G   
Sbjct: 321 ENSRDGE-EDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEA 379

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
           ++SV NA++TMY K G  EEA RMF+ +++ + ISW A+IS Y   G G K +  F E +
Sbjct: 380 DLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMI 439

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHG-FAIKHGYLSDVRLGTALVDIYAKGGDL 412
                 D   + +++  C+       G+ L      K+G    +     +VD+  + G L
Sbjct: 440 KKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYACMVDLLGRAGHL 499

Query: 413 KSA 415
             A
Sbjct: 500 SEA 502



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 199/412 (48%), Gaps = 13/412 (3%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
            GQ  H F++K G   +     +LI +Y +      A+K+FD M  +    +  +I  Y 
Sbjct: 59  FGQQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYA 118

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
             G+ E  + +  +M  +  + N++T + I+ AC        GEQ    + K GF N   
Sbjct: 119 RAGNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETS 178

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF--VHLLS 253
           +G ++I+MY   G  REAE +F  +  +++     +I  Y ++G+ + A   F  +HL  
Sbjct: 179 IGNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCG 238

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            +F+ +    T ++  C E   +E G Q+HGL +K G    +++G A+V +Y K G    
Sbjct: 239 VNFDSS--LLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMS 296

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGK--AINGFLEFLDLGICCDSSCLATVIDGC 371
           A  +FD +S + + S+ A+++G++ +   G+   I  F  F   GI  D    + ++   
Sbjct: 297 ARMVFDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLS 356

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  S L  G   H +AIK G+ +D+ +  A++ +YAK G ++ A  + +  +   +  +N
Sbjct: 357 ANHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWN 416

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
           A++S +   +      V++LF +       PD +T      LS  QAC   G
Sbjct: 417 AMISAY--ALHGQGAKVLLLFEEMIKKEFAPDEITI-----LSILQACTYSG 461


>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
 gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/595 (63%), Positives = 471/595 (79%), Gaps = 6/595 (1%)

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
           EKFNEHTC VIL+ACS + D + GEQIH F IKSGFE NVFVGTSLISMY  SG F EAE
Sbjct: 6   EKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAE 65

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
            VF G+  KD+RC+N MILEY KAG  + A  VF++L+S   +PNDYTFTN+IS C    
Sbjct: 66  KVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTC---- 121

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
            VEEGKQLHGLAVK+GV+ + SVGNA++TMYGK+GM EEA RMF  ++++NLISWTALIS
Sbjct: 122 NVEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALIS 181

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           GY R+G+G KA++GFLE    G+ CDS  LAT++DGCS C NL+LG Q+HG  IK GY  
Sbjct: 182 GYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPC 241

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           D+ +GTAL+D+YAK  + +SAR + +G S + TA FNAIL GF+E    +EED MV  SQ
Sbjct: 242 DINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIEN-DSNEEDPMVFLSQ 300

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            RLAG++PD V+FSRLLSLSA++A LV+GR LHAYSIKTG+A  + V NALITMYAKCG 
Sbjct: 301 LRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGI 360

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           ++ A+Q F  +S  D +SWNA++SAY+LHG G+ ALLL++EM+ +GF PD+I+IL +LQA
Sbjct: 361 VEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQA 420

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C YSGLSE G+ LFN +E  YG++P+LEH+ACMVDLLGRAG LS+AM++IN SPFSES L
Sbjct: 421 CTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSESTL 480

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           LWRTLV+V KL  +     LASK LLDL P +AGS++LVSN+YAG+GM+DEA+KVRTTM 
Sbjct: 481 LWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVRTTMK 540

Query: 695 DLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSA 749
           DL+LSKEAG SW+EID+ +H+FVASG DHPES EIY++LDLL +EM+  + DS A
Sbjct: 541 DLKLSKEAGSSWVEIDNMVHYFVASGTDHPESIEIYARLDLLRNEMR-GIYDSKA 594



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 204/415 (49%), Gaps = 12/415 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GD+ LG+ +H F++KSG + + F   +LI++Y++    D A+K+F+G+  +       +I
Sbjct: 24  GDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKDLRCLNCMI 83

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y   G  +  +G+   +       N++T + I+  C++ E    G+Q+H  A+K G  
Sbjct: 84  LEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCNVEE----GKQLHGLAVKYGVL 139

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
               VG ++I+MY  +G   EA  +F  +  K++     +I  Y + G  E A   F+ L
Sbjct: 140 LQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGEKAVDGFLEL 199

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                E +      ++  C E   ++ G Q+HGL +K G   +I++G A++ +Y K    
Sbjct: 200 RGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNF 259

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDG 370
           + A  +F+ +S R+  S+ A++ G++ +    +    FL  L L GI  DS   + ++  
Sbjct: 260 QSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSL 319

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            +  ++L  G  LH ++IK G+   + +  AL+ +YAK G ++ A    +  S      +
Sbjct: 320 SANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISW 379

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
           NAI+S +   +    E  ++L+ +    G  PD +T   +L     QAC   G S
Sbjct: 380 NAIISAY--SLHGQGEKALLLYQEMEEKGFTPDEITILVIL-----QACTYSGLS 427



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 179/354 (50%), Gaps = 2/354 (0%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           I + +++ G+ +H   +K G    T   N +I +Y K   ++ A ++F  M  ++ I+WT
Sbjct: 118 ISTCNVEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWT 177

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           +LI GY  +G  E  +    ++     + +    + IL+ CS  ++   G QIH   IK 
Sbjct: 178 ALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKL 237

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G+  ++ +GT+LI +Y     F+ A  VF GL+ +     N +++ + +   +E    VF
Sbjct: 238 GYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVF 297

Query: 249 VHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           +  L  +  +P+  +F+ ++S+      + +G+ LH  ++K G    ISV NA++TMY K
Sbjct: 298 LSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAK 357

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G+ E+A + F+++S  + ISW A+IS Y   G G KA+  + E  + G   D   +  +
Sbjct: 358 CGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVI 417

Query: 368 IDGCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +  C+     E GL L +    K+G    +     +VD+  + G L  A  +++
Sbjct: 418 LQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIIN 471



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 55/110 (50%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           + +L+ +S     L  G+ +HA+ +K+G       +N LI +YAK   ++ A + F+ M 
Sbjct: 313 FSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMS 372

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
               I+W ++I  Y   G  E  L +  +M       +E T  VIL+AC+
Sbjct: 373 ANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACT 422


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/690 (33%), Positives = 393/690 (56%), Gaps = 7/690 (1%)

Query: 49  VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           V C+E T     +P ++K      DL +G+ VH   + +G ++D F AN L+ +YAK   
Sbjct: 78  VKCNEFT-----FPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGL 132

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           LD +++LF G++ R+ ++W +L   Y+        +G+  +M RS    NE + S+IL A
Sbjct: 133 LDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNA 192

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C+ L++   G +IH   +K G + + F   +L+ MY  +G    A  VF+ +A+ DV   
Sbjct: 193 CAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSW 252

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N +I        +++A  +   +  S   PN +T ++ +  C      E G+QLH   +K
Sbjct: 253 NAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIK 312

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
                ++     +V MY K  M ++A R +D++ ++++I+W ALISGY + G    A++ 
Sbjct: 313 MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSL 372

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F +     I  + + L+TV+   +    +++  Q+H  +IK G  SD  +  +L+D Y K
Sbjct: 373 FSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGK 432

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
              +  A  + +  + +    + ++++ + +    D E+ + L+ Q + A ++PDP   S
Sbjct: 433 CNHIDEASKIFEERTWEDLVAYTSMITAYSQ--YGDGEEALKLYLQMQDADIKPDPFICS 490

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            LL+  A+ +   +G+ LH ++IK G+  D+   N+L+ MYAKCGSI+ A + F  I +R
Sbjct: 491 SLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNR 550

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
            IVSW+AM+  YA HG GK AL LF +M R+G  P+ I+++ VL AC ++GL   G   F
Sbjct: 551 GIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYF 610

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
            ++E ++G++P  EH+ACM+DLLGR+G+L+EA+ L+NS PF     +W  L+  +++  N
Sbjct: 611 EKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKN 670

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            +    A+K L DLEP+ +G+ +L++N+YA  GM +  AKVR  M D ++ KE G SWIE
Sbjct: 671 IELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIE 730

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLND 738
           I  K++ F+   + H  S+EIY+KLD L D
Sbjct: 731 IKDKVYTFIVGDRSHSRSDEIYAKLDQLGD 760



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 168/578 (29%), Positives = 288/578 (49%), Gaps = 30/578 (5%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA L+K G   D    N+L+ LY+K  R   A+KL D       ++W+SL+ GY+ +G 
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E  L +  +M     K NE T   +L+ACS+  D   G ++H  A+ +GFE++ FV  +
Sbjct: 63  VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ MY   G   ++  +F G+  ++V   N +   Y ++     A  +F  ++ S   PN
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182

Query: 260 DYTFTNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +++ + +++ C    G++E   G+++HGL +K G+  +    NA+V MY K G  E A  
Sbjct: 183 EFSISIILNAC---AGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  I+  +++SW A+I+G V       A+    E    G   +   L++ +  C+    
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
            ELG QLH   IK    SD+     LVD+Y+K   +  AR   D    K    +NA++SG
Sbjct: 300 KELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISG 359

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           + +    D  D + LFS+     ++ +  T S +L   AS   +   + +H  SIK+G  
Sbjct: 360 YSQ--CGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIY 417

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           +D  V N+L+  Y KC  ID A +IF+  +  D+V++ +M++AY+ +G G+ AL L+ +M
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQM 477

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC-------MVD 609
           +     PD      +L AC         +  + + +Q++ +  I   F C       +V+
Sbjct: 478 QDADIKPDPFICSSLLNAC-------ANLSAYEQGKQLH-VHAIKFGFMCDIFASNSLVN 529

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           +  + G + +A        FSE P   R +VS S ++ 
Sbjct: 530 MYAKCGSIEDA-----DRAFSEIPN--RGIVSWSAMIG 560



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 239/492 (48%), Gaps = 17/492 (3%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           ++HA  IK GF  +  +   L+++Y     F  A  +    +  DV   + ++  Y + G
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             E A  VF  +     + N++TF +V+  C     +  G+++HG+AV  G   +  V N
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            +V MY K G+ +++ R+F  I ERN++SW AL S YV+S   G+A+  F E +  GI  
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   ++ +++ C+     +LG ++HG  +K G   D     ALVD+Y+K G+++ A  + 
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
              +      +NAI++G +  + D  +  ++L  + + +G  P+  T S  L   A+   
Sbjct: 242 QDIAHPDVVSWNAIIAGCV--LHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
              GR LH+  IK    +D+     L+ MY+KC  +D A + +  +  +DI++WNA++S 
Sbjct: 300 KELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISG 359

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y+  G    A+ LF +M  E    +  ++  VL++   + L    +C   +I  I     
Sbjct: 360 YSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSV--ASLQAIKVC--KQIHTISIKSG 415

Query: 600 ILEHFAC---MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS-VSKLMANSKFSILA 655
           I   F     ++D  G+   + EA     S  F E    W  LV+  S + A S++    
Sbjct: 416 IYSDFYVINSLLDTYGKCNHIDEA-----SKIFEERT--WEDLVAYTSMITAYSQYGDGE 468

Query: 656 SKRLLDLEPKDA 667
               L L+ +DA
Sbjct: 469 EALKLYLQMQDA 480



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 187/367 (50%), Gaps = 33/367 (8%)

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
           ++LH   IK G+  D  L   LV +Y+K      AR L+D  S      ++++LSG+++ 
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                E+ +++F++  L G++ +  TF  +L   + +  L  GR +H  ++ TG+ +D  
Sbjct: 61  --GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGF 118

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           V N L+ MYAKCG +D + ++F GI +R++VSWNA+ S Y    L   A+ LF+EM R G
Sbjct: 119 VANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG 178

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI----LEHFA--CMVDLLGRA 614
             P++ SI  +L AC  +GL EG +       +I+GL       L+ F+   +VD+  +A
Sbjct: 179 IMPNEFSISIILNAC--AGLQEGDLG-----RKIHGLMLKMGLDLDQFSANALVDMYSKA 231

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G +  A+ +       +  + W  +++   L   +  +++    LLD E K +G+     
Sbjct: 232 GEIEGAVAVFQDIAHPD-VVSWNAIIAGCVLHDCNDLALM----LLD-EMKGSGT---RP 282

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           NM+     L  A K    M    L ++   S I++D+    F A G       ++YSK +
Sbjct: 283 NMFT----LSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGL-----VDMYSKCE 333

Query: 735 LLNDEMK 741
           +++D  +
Sbjct: 334 MMDDARR 340


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/672 (33%), Positives = 376/672 (55%), Gaps = 2/672 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ G+ +H   +++G   D   AN ++N+YAK   ++ A+++FD M  +S ++WT  I
Sbjct: 140 GALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITI 199

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY D G  E+   I   M +     N  T   +L A S      +G+ +H+  + +G E
Sbjct: 200 GGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHE 259

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++  VGT+L+ MY   G +++   VF  L  +D+   N MI    + G  E A  V+  +
Sbjct: 260 SDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQM 319

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 PN  T+  +++ C  +  +  GK++H    K G   +I V NA+++MY + G  
Sbjct: 320 QREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSI 379

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A  +FD +  +++ISWTA+I G  +SG G +A+  + E    G+  +     ++++ C
Sbjct: 380 KDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNAC 439

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S  + LE G ++H   ++ G  +D  +G  LV++Y+  G +K AR + D    +    +N
Sbjct: 440 SSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYN 499

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A++ G+       E   + LF + +  G++PD VT+  +L+  A+   L   R +H    
Sbjct: 500 AMIGGYAAHNLGKE--ALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVR 557

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+ +D  VGNAL++ YAKCGS   A  +F+ ++ R+++SWNA++   A HG G+ AL 
Sbjct: 558 KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQ 617

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LFE MK EG  PD ++ + +L AC ++GL E G   F  + Q + + P +EH+ CMVDLL
Sbjct: 618 LFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLL 677

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAG+L EA  LI + PF  +  +W  L+   ++  N   +  A++  L L+  +A  ++
Sbjct: 678 GRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYV 737

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
            +S+MYA  GM D AAK+R  M    ++KE G SWI++  KLH+FVA  + HP+SE+IY+
Sbjct: 738 ALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYA 797

Query: 732 KLDLLNDEMKLK 743
           +LD L   MK+K
Sbjct: 798 ELDRLTHAMKMK 809



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 269/523 (51%), Gaps = 4/523 (0%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           +D+ +++K  I   DL  G+ VH  +++  +  D +  N LIN+Y +   ++ A++++  
Sbjct: 24  SDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKK 83

Query: 119 M--LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           +  + R+  +W +++ GY+  G  E  L +   M +     +  T    L +C       
Sbjct: 84  LSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALE 143

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           +G +IH  A+++G   +V V   +++MY   G   EA  VF  +  K V      I  Y 
Sbjct: 144 WGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYA 203

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             G SE AF +F  +      PN  T+ +V++       ++ GK +H   +  G   + +
Sbjct: 204 DCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTA 263

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           VG A+V MY K G  ++  ++F+ +  R+LI+W  +I G    G+  +A   + +    G
Sbjct: 264 VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREG 323

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  +      +++ C   + L  G ++H    K G+ SD+ +  AL+ +Y++ G +K AR
Sbjct: 324 VMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDAR 383

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           ++ D    K    + A++ G  +     E   + ++ + + AG+EP+ VT++ +L+  +S
Sbjct: 384 LVFDKMVRKDVISWTAMIGGLAKSGFGAE--ALTVYQEMQQAGVEPNRVTYTSILNACSS 441

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
            A L  GR +H   ++ G A D  VGN L+ MY+ CGS+  A Q+F  +  RDIV++NAM
Sbjct: 442 PAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAM 501

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           +  YA H LGK AL LF+ ++ EG  PD ++ + +L AC  SG
Sbjct: 502 IGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 544



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 179/342 (52%), Gaps = 4/342 (1%)

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           E + A  V  +L     + N   +  ++  C E   +  G+Q+H   ++   V +    N
Sbjct: 3   EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN 62

Query: 300 AIVTMYGKHGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           A++ MY + G  EEA +++  +S  ER + SW A++ GY++ G+  KA+    +    G+
Sbjct: 63  ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGL 122

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D + + + +  C     LE G ++H  A++ G L DV++   ++++YAK G ++ AR 
Sbjct: 123 APDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEARE 182

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +   + G+ +      E    +F +    G+ P+ +T+  +L+  +S 
Sbjct: 183 VFDKMEKKSVVSWTITIGGYAD--CGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L  G+++H+  +  G+ +D  VG AL+ MYAKCGS     Q+F+ + +RD+++WN M+
Sbjct: 241 AALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 300

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
              A  G  + A  ++ +M+REG  P+ I+ + +L AC+ S 
Sbjct: 301 GGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSA 342



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 177/361 (49%), Gaps = 9/361 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+   + S  L  G+ +H+ + K+G  +D    N LI++Y++   +  A+ +FD M+ + 
Sbjct: 334 LLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKD 393

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+WT++I G    G     L +  +M ++  + N  T + IL ACS      +G +IH 
Sbjct: 394 VISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQ 453

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +++G   +  VG +L++MY   G  ++A  VF  +  +D+   N MI  Y      + 
Sbjct: 454 QVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKE 513

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  L     +P+  T+ N+++ C  +  +E  +++H L  K G   + SVGNA+V+
Sbjct: 514 ALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVS 573

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K G   +A  +F+ +++RN+ISW A+I G  + G G  A+  F      G+  D   
Sbjct: 574 TYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVT 633

Query: 364 LATVIDGCSVCSNLELGLQL-----HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
             +++  CS    LE G +        FAI    +  +     +VD+  + G L  A  L
Sbjct: 634 FVSLLSACSHAGLLEEGRRYFCSMSQDFAI----IPTIEHYGCMVDLLGRAGQLDEAEAL 689

Query: 419 L 419
           +
Sbjct: 690 I 690



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 6/185 (3%)

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D   DV+    QQ   G + +   + ++L        LV GR +H + I+     D    
Sbjct: 5   DGAVDVVQYLQQQ---GAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTV 61

Query: 503 NALITMYAKCGSIDGAFQIFKGIS--DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           NALI MY +CGSI+ A Q++K +S  +R + SWNAM+  Y  +G  + AL L  +M++ G
Sbjct: 62  NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG 121

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            APD  +I+  L +C   G  E G  +  +  Q  GL   ++   C++++  + G + EA
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQA-GLLFDVKVANCILNMYAKCGSIEEA 180

Query: 621 MNLIN 625
             + +
Sbjct: 181 REVFD 185


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/670 (33%), Positives = 376/670 (56%), Gaps = 2/670 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +H   +K+    D   AN ++N+YAK   +  A+++FD M  +S ++WT +I G
Sbjct: 260 LECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGG 319

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y D G  E    I   M +     N  T   +L A S      +G+ +H+  + +G E++
Sbjct: 320 YADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESD 379

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + VGT+L+ MY   G +++   VF  L  +D+   N MI    + G  E A  ++  +  
Sbjct: 380 LAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQR 439

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               PN  T+  +++ C     +  G+++H   VK G + +ISV NA+++MY + G  ++
Sbjct: 440 EGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKD 499

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F+ +  +++ISWTA+I G  +SG G +A+  F +    G+  +     ++++ CS 
Sbjct: 500 ARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSS 559

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + L+ G ++H   I+ G  +D  +   LV++Y+  G +K AR + D  + +    +NA+
Sbjct: 560 PAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAM 619

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + G+       E   + LF + +  G++PD VT+  +L+  A+   L   + +H+  +K 
Sbjct: 620 IGGYAAHNLGKE--ALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD 677

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY +D  +GNAL++ YAKCGS   A  +F  +  R+++SWNA++   A HG G+  L LF
Sbjct: 678 GYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLF 737

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           E MK EG  PD ++ + +L AC ++GL E G   F  + + +G+ P +EH+ CMVDLLGR
Sbjct: 738 ERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGR 797

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AG+L E   LI + PF  +  +W  L+   ++  N   +  A++  L L+P +A  ++ +
Sbjct: 798 AGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVAL 857

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           S+MYA  GM D AAK+R  M    ++KE G SWIE+  KLH+FVA  + HPESE+IY++L
Sbjct: 858 SHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAEL 917

Query: 734 DLLNDEMKLK 743
           D L   MK++
Sbjct: 918 DKLTHAMKME 927



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 270/522 (51%), Gaps = 4/522 (0%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           D+ +++K  I   DL  G+ VH  +++  +  D +  N LIN+Y +   ++ A+++++ +
Sbjct: 143 DYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKL 202

Query: 120 --LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
               R+  +W +++ GY+  G  E  L +  +M +        T   +L +C        
Sbjct: 203 NHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALEC 262

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G +IH  A+K+    +V V   +++MY   G   EA  VF  +  K V     +I  Y  
Sbjct: 263 GREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYAD 322

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G SE+AF +F  +      PN  T+ NV++       ++ GK +H   +  G   +++V
Sbjct: 323 CGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAV 382

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G A+V MY K G  ++  ++F+ +  R+LI+W  +I G    G+  +A   + +    G+
Sbjct: 383 GTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGM 442

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +      +++ C   + L  G ++H   +K G++ D+ +  AL+ +YA+ G +K AR+
Sbjct: 443 MPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARL 502

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L +    K    + A++ G  +     E   + +F   + AG++P+ VT++ +L+  +S 
Sbjct: 503 LFNKMVRKDIISWTAMIGGLAKSGLGAE--ALAVFQDMQQAGLKPNRVTYTSILNACSSP 560

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L  GR +H   I+ G A D  V N L+ MY+ CGS+  A Q+F  ++ RDIV++NAM+
Sbjct: 561 AALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMI 620

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
             YA H LGK AL LF+ ++ EG  PD ++ + +L AC  SG
Sbjct: 621 GGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 662



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 183/368 (49%), Gaps = 14/368 (3%)

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           R   N      YKD R +             + A  V  +L       N   +  ++  C
Sbjct: 102 RSKANKLHSHTYKDERTIT----------GKDRAMDVVQYLQQQGARVNSCDYMKMLKRC 151

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI--SERNLIS 328
            E   +  G+++H   ++   V +    NA++ MY + G  EEA ++++ +  +ER + S
Sbjct: 152 IEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHS 211

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           W A++ GYV+ G+  +A+    E    G+    +    ++  C   S LE G ++H  A+
Sbjct: 212 WNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAM 271

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           K   L DV +   ++++YAK G +  AR + D    K    +  I+ G+ +      E  
Sbjct: 272 KARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYAD--CGHSEIA 329

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
             +F + +  G+ P+ +T+  +L+  +  A L  G+++H++ +  G+ +D+ VG AL+ M
Sbjct: 330 FEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKM 389

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           YAKCGS     Q+F+ + +RD+++WN M+   A  G  + A  ++ +M+REG  P+ I+ 
Sbjct: 390 YAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITY 449

Query: 569 LGVLQACI 576
           + +L AC+
Sbjct: 450 VILLNACV 457



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 171/357 (47%), Gaps = 1/357 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+   +    L  G+ +H+ ++K G   D    N LI++YA+   +  A+ LF+ M+ + 
Sbjct: 452 LLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKD 511

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+WT++I G    G     L +  DM ++  K N  T + IL ACS      +G +IH 
Sbjct: 512 IISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQ 571

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I++G   +  V  +L++MY   G  ++A  VF  +  +D+   N MI  Y      + 
Sbjct: 572 QVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKE 631

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  L     +P+  T+ N+++ C  +  +E  K++H L +K G + + S+GNA+V+
Sbjct: 632 ALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVS 691

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K G   +A  +FD + +RN+ISW A+I G  + G G   +  F      GI  D   
Sbjct: 692 TYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVT 751

Query: 364 LATVIDGCSVCSNLELGLQLH-GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
             +++  CS    LE G +     +   G    +     +VD+  + G L     L+
Sbjct: 752 FVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALI 808



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 7/200 (3%)

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D   DV+    QQ   G   +   + ++L        LV GR +H + I+     D    
Sbjct: 123 DRAMDVVQYLQQQ---GARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTV 179

Query: 503 NALITMYAKCGSIDGAFQIFKGI--SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           NALI MY +CGSI+ A Q++  +  ++R + SWNAM+  Y  +G  + AL L  EM++ G
Sbjct: 180 NALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHG 239

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            A    + + +L +C      E G  +  E  +   L  +     C++++  + G + EA
Sbjct: 240 LALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDV-NVANCILNMYAKCGSIHEA 298

Query: 621 MNLINSSPFSESPLLWRTLV 640
             + +    ++S + W  ++
Sbjct: 299 REVFDKME-TKSVVSWTIII 317


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/669 (33%), Positives = 380/669 (56%), Gaps = 11/669 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ ++  +LK+G   D F    LIN++ K   +  A K+FD +  R  +TWTS+I G   
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            G ++     AC++++  E+       V    +L AC+  E    G+++HA   + G++ 
Sbjct: 290 HGRFKQ----ACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDT 345

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            ++VGT+++SMY   G   +A  VF  +  ++V     MI  + + G  + AF  F  ++
Sbjct: 346 EIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI 405

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S  EPN  TF +++  C     ++ G+Q+    ++ G   +  V  A+++MY K G  +
Sbjct: 406 ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLK 465

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A R+F+ IS++N+++W A+I+ YV+      A+  F   L  GI  +SS   ++++ C 
Sbjct: 466 DAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCK 525

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +LELG  +H   +K G  SD+ +  ALV ++   GDL SA+ L +    +    +N 
Sbjct: 526 SSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNT 585

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I++GF++      +     F   + +G++PD +TF+ LL+  AS   L  GR LHA   +
Sbjct: 586 IIAGFVQH--GKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITE 643

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
             +  DV+VG  LI+MY KCGSI+ A Q+F  +  +++ SW +M++ YA HG GK AL L
Sbjct: 644 AAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALEL 703

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F +M++EG  PD I+ +G L AC ++GL E G+  F  +++ + + P +EH+ CMVDL G
Sbjct: 704 FYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFG 762

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG L+EA+  I          +W  L+   ++  N + +  A+++ L+L+P D G F++
Sbjct: 763 RAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVI 822

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+YA  GM  E AK+R  M D  + K+ G SWIE+D K+H F +  K HP++EEI+++
Sbjct: 823 LSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAE 882

Query: 733 LDLLNDEMK 741
           L+ L+ EM+
Sbjct: 883 LERLHMEMR 891



 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 161/539 (29%), Positives = 285/539 (52%), Gaps = 3/539 (0%)

Query: 46  ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK 105
           +  V  S   +    +  L+++ I   +L  G+ ++  + KSG Q D F  N LIN+YAK
Sbjct: 98  LERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAK 157

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
                 A+++FD M  +   +W  L+ GY+  G YE    +   M +   K ++ T   +
Sbjct: 158 CGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSM 217

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L AC+   +   G +++   +K+G++ ++FVGT+LI+M+   G   +A  VF  L  +D+
Sbjct: 218 LNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDL 277

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
                MI    + G  + A ++F  +     +P+   F +++  C     +E+GK++H  
Sbjct: 278 VTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHAR 337

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
             + G   EI VG AI++MY K G  E+A  +FD +  RN++SWTA+I+G+ + G   +A
Sbjct: 338 MKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEA 397

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
              F + ++ GI  +     +++  CS  S L+ G Q+    I+ GY SD R+ TAL+ +
Sbjct: 398 FLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSM 457

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           YAK G LK A  + +  S +    +NA+++ +++   +  ++ +  F      G++P+  
Sbjct: 458 YAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQH--EQYDNALATFQALLKEGIKPNSS 515

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           TF+ +L++  S   L  G+ +H   +K G  +D+ V NAL++M+  CG +  A  +F  +
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM 575

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEG 583
             RD+VSWN +++ +  HG  + A   F+ M+  G  PD I+  G+L AC     L+EG
Sbjct: 576 PKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 264/504 (52%), Gaps = 4/504 (0%)

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G +   + +   +  S  +    T S +L+ C   ++   GE+I+    KSG + ++F+ 
Sbjct: 89  GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMW 148

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +LI+MY   G    A+ +F  +  KDV   N ++  Y + G  E AF +   ++    +
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+  TF ++++ C +   V++G++L+ L +K G   ++ VG A++ M+ K G   +A ++
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD +  R+L++WT++I+G  R G   +A N F    + G+  D     +++  C+    L
Sbjct: 269 FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEAL 328

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           E G ++H    + G+ +++ +GTA++ +Y K G ++ A  + D    +    + A+++GF
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGF 388

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +    DE    + F++   +G+EP+ VTF  +L   +S + L RG+ +  + I+ GY +
Sbjct: 389 AQHGRIDE--AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGS 446

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D  V  AL++MYAKCGS+  A ++F+ IS +++V+WNAM++AY  H     AL  F+ + 
Sbjct: 447 DDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALL 506

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
           +EG  P+  +   +L  C  S   E G  +   I +  GL   L     +V +    G L
Sbjct: 507 KEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA-GLESDLHVSNALVSMFVNCGDL 565

Query: 618 SEAMNLINSSPFSESPLLWRTLVS 641
             A NL N  P     + W T+++
Sbjct: 566 MSAKNLFNDMP-KRDLVSWNTIIA 588



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 236/473 (49%), Gaps = 7/473 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VHA + + G   + +    ++++Y K   ++ A ++FD +  R+ ++WT++I G
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +   G  +        M  S  + N  T   IL ACS       G+QI    I++G+ ++
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             V T+L+SMY   G  ++A  VF  ++ ++V   N MI  Y +  + + A   F  LL 
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +PN  TFT++++VC  +  +E GK +H L +K G+  ++ V NA+V+M+   G    
Sbjct: 508 EGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMS 567

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+ +F+ + +R+L+SW  +I+G+V+ G    A + F    + GI  D      +++ C+ 
Sbjct: 568 AKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACAS 627

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L  G +LH    +  +  DV +GT L+ +Y K G ++ A  +      K    + ++
Sbjct: 628 PEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSM 687

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++G+ +     E   + LF Q +  G++PD +TF   LS  A    +  G  LH +    
Sbjct: 688 ITGYAQHGRGKE--ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG--LHHFQSMK 743

Query: 494 GYAADVIVGN--ALITMYAKCGSIDGAFQ-IFKGISDRDIVSWNAMLSAYALH 543
            +  +  + +   ++ ++ + G ++ A + I K   + D   W A+L A  +H
Sbjct: 744 EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVH 796



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 199/377 (52%), Gaps = 7/377 (1%)

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--YENLGVEEGK 280
           KD +  N ++   +KAG+   A  V   + SS  +    T++ ++ +C  ++NLG  +G+
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG--DGE 130

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           +++    K GV  +I + N ++ MY K G +  A+++FD + E+++ SW  L+ GYV+ G
Sbjct: 131 RIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG 190

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +A     + +   +  D     ++++ C+   N++ G +L+   +K G+ +D+ +GT
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGT 250

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           AL++++ K GD+  A  + D    +    + ++++G         +    LF +    G+
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH--GRFKQACNLFQRMEEEGV 308

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +PD V F  LL        L +G+ +HA   + G+  ++ VG A+++MY KCGS++ A +
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SG 579
           +F  +  R++VSW AM++ +A HG    A L F +M   G  P+ ++ + +L AC   S 
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSA 428

Query: 580 LSEGGICLFNEIEQIYG 596
           L  G     + IE  YG
Sbjct: 429 LKRGQQIQDHIIEAGYG 445



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 1/271 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ +   S  L+LG+ VH  ++K+G ++D   +N L++++     L  A+ LF+ M  R 
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W ++I G++  G  +        M  S  K ++ T + +L AC+  E    G ++HA
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
              ++ F+ +V VGT LISMY   G   +A  VF  L  K+V     MI  Y + G  + 
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKE 699

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +     +P+  TF   +S C     +EEG        +F +   +     +V 
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVD 759

Query: 304 MYGKHGMSEEA-ERMFDAISERNLISWTALI 333
           ++G+ G+  EA E +     E +   W AL+
Sbjct: 760 LFGRAGLLNEAVEFIIKMQVEPDSRVWGALL 790


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/669 (33%), Positives = 380/669 (56%), Gaps = 11/669 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ ++  +LK+G   D F    LIN++ K   +  A K+FD +  R  +TWTS+I G   
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            G ++     AC++++  E+       V    +L AC+  E    G+++HA   + G++ 
Sbjct: 290 HGRFKQ----ACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDT 345

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            ++VGT+++SMY   G   +A  VF  +  ++V     MI  + + G  + AF  F  ++
Sbjct: 346 EIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI 405

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S  EPN  TF +++  C     ++ G+Q+    ++ G   +  V  A+++MY K G  +
Sbjct: 406 ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLK 465

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A R+F+ IS++N+++W A+I+ YV+      A+  F   L  GI  +SS   ++++ C 
Sbjct: 466 DAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCK 525

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +LELG  +H   +K G  SD+ +  ALV ++   GDL SA+ L +    +    +N 
Sbjct: 526 SSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNT 585

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I++GF++      +     F   + +G++PD +TF+ LL+  AS   L  GR LHA   +
Sbjct: 586 IIAGFVQH--GKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITE 643

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
             +  DV+VG  LI+MY KCGSI+ A Q+F  +  +++ SW +M++ YA HG GK AL L
Sbjct: 644 AAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALEL 703

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F +M++EG  PD I+ +G L AC ++GL E G+  F  +++ + + P +EH+ CMVDL G
Sbjct: 704 FYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFG 762

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG L+EA+  I          +W  L+   ++  N + +  A+++ L+L+P D G F++
Sbjct: 763 RAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVI 822

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+YA  GM  E AK+R  M D  + K+ G SWIE+D K+H F +  K HP++EEI+++
Sbjct: 823 LSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAE 882

Query: 733 LDLLNDEMK 741
           L+ L+ EM+
Sbjct: 883 LERLHMEMR 891



 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 161/539 (29%), Positives = 285/539 (52%), Gaps = 3/539 (0%)

Query: 46  ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK 105
           +  V  S   +    +  L+++ I   +L  G+ ++  + KSG Q D F  N LIN+YAK
Sbjct: 98  LERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAK 157

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
                 A+++FD M  +   +W  L+ GY+  G YE    +   M +   K ++ T   +
Sbjct: 158 CGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSM 217

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L AC+   +   G +++   +K+G++ ++FVGT+LI+M+   G   +A  VF  L  +D+
Sbjct: 218 LNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDL 277

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
                MI    + G  + A ++F  +     +P+   F +++  C     +E+GK++H  
Sbjct: 278 VTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHAR 337

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
             + G   EI VG AI++MY K G  E+A  +FD +  RN++SWTA+I+G+ + G   +A
Sbjct: 338 MKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEA 397

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
              F + ++ GI  +     +++  CS  S L+ G Q+    I+ GY SD R+ TAL+ +
Sbjct: 398 FLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSM 457

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           YAK G LK A  + +  S +    +NA+++ +++   +  ++ +  F      G++P+  
Sbjct: 458 YAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQH--EQYDNALATFQALLKEGIKPNSS 515

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           TF+ +L++  S   L  G+ +H   +K G  +D+ V NAL++M+  CG +  A  +F  +
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM 575

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEG 583
             RD+VSWN +++ +  HG  + A   F+ M+  G  PD I+  G+L AC     L+EG
Sbjct: 576 PKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 264/504 (52%), Gaps = 4/504 (0%)

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G +   + +   +  S  +    T S +L+ C   ++   GE+I+    KSG + ++F+ 
Sbjct: 89  GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMR 148

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +LI+MY   G    A+ +F  +  KDV   N ++  Y + G  E AF +   ++    +
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+  TF ++++ C +   V++G++L+ L +K G   ++ VG A++ M+ K G   +A ++
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD +  R+L++WT++I+G  R G   +A N F    + G+  D     +++  C+    L
Sbjct: 269 FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEAL 328

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           E G ++H    + G+ +++ +GTA++ +Y K G ++ A  + D    +    + A+++GF
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGF 388

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +    DE    + F++   +G+EP+ VTF  +L   +S + L RG+ +  + I+ GY +
Sbjct: 389 AQHGRIDE--AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGS 446

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D  V  AL++MYAKCGS+  A ++F+ IS +++V+WNAM++AY  H     AL  F+ + 
Sbjct: 447 DDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALL 506

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
           +EG  P+  +   +L  C  S   E G  +   I +  GL   L     +V +    G L
Sbjct: 507 KEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA-GLESDLHVSNALVSMFVNCGDL 565

Query: 618 SEAMNLINSSPFSESPLLWRTLVS 641
             A NL N  P     + W T+++
Sbjct: 566 MSAKNLFNDMP-KRDLVSWNTIIA 588



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 236/473 (49%), Gaps = 7/473 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VHA + + G   + +    ++++Y K   ++ A ++FD +  R+ ++WT++I G
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +   G  +        M  S  + N  T   IL ACS       G+QI    I++G+ ++
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             V T+L+SMY   G  ++A  VF  ++ ++V   N MI  Y +  + + A   F  LL 
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +PN  TFT++++VC  +  +E GK +H L +K G+  ++ V NA+V+M+   G    
Sbjct: 508 EGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMS 567

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+ +F+ + +R+L+SW  +I+G+V+ G    A + F    + GI  D      +++ C+ 
Sbjct: 568 AKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACAS 627

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L  G +LH    +  +  DV +GT L+ +Y K G ++ A  +      K    + ++
Sbjct: 628 PEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSM 687

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++G+ +     E   + LF Q +  G++PD +TF   LS  A    +  G  LH +    
Sbjct: 688 IAGYAQHGRGKE--ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG--LHHFQSMK 743

Query: 494 GYAADVIVGN--ALITMYAKCGSIDGAFQ-IFKGISDRDIVSWNAMLSAYALH 543
            +  +  + +   ++ ++ + G ++ A + I K   + D   W A+L A  +H
Sbjct: 744 EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVH 796



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 199/377 (52%), Gaps = 7/377 (1%)

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--YENLGVEEGK 280
           KD +  N ++   +KAG+   A  V   + SS  +    T++ ++ +C  ++NLG  +G+
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG--DGE 130

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           +++    K GV  +I + N ++ MY K G +  A+++FD + E+++ SW  L+ GYV+ G
Sbjct: 131 RIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG 190

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +A     + +   +  D     ++++ C+   N++ G +L+   +K G+ +D+ +GT
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGT 250

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           AL++++ K GD+  A  + D    +    + ++++G         +    LF +    G+
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH--GRFKQACNLFQRMEEEGV 308

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +PD V F  LL        L +G+ +HA   + G+  ++ VG A+++MY KCGS++ A +
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SG 579
           +F  +  R++VSW AM++ +A HG    A L F +M   G  P+ ++ + +L AC   S 
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSA 428

Query: 580 LSEGGICLFNEIEQIYG 596
           L  G     + IE  YG
Sbjct: 429 LKRGQQIQDHIIEAGYG 445



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 1/271 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ +   S  L+LG+ VH  ++K+G ++D   +N L++++     L  A+ LF+ M  R 
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W ++I G++  G  +        M  S  K ++ T + +L AC+  E    G ++HA
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
              ++ F+ +V VGT LISMY   G   +A  VF  L  K+V     MI  Y + G  + 
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKE 699

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +     +P+  TF   +S C     +EEG        +F +   +     +V 
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVD 759

Query: 304 MYGKHGMSEEA-ERMFDAISERNLISWTALI 333
           ++G+ G+  EA E +     E +   W AL+
Sbjct: 760 LFGRAGLLNEAVEFIIKMQVEPDSRVWGALL 790


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/700 (34%), Positives = 397/700 (56%), Gaps = 11/700 (1%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           ++  L+++SI    +   + +H  ++ SG Q+DTF AN LIN+ +K +R+D A+ +FD M
Sbjct: 51  EFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKM 110

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFG 178
             ++ ITW+S++  Y   G  E  L +  D+ R S E  NE   + ++ AC+ L     G
Sbjct: 111 PHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKG 170

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+H F ++SGF+ +V+VGTSLI  Y  +G   EA  VF  L+ K       +I  Y K 
Sbjct: 171 AQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKC 230

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G S ++  +F  +  ++  P+ Y  ++V+S C     +E GKQ+H   ++ G   ++SV 
Sbjct: 231 GRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV 290

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N ++  Y K    +   ++FD +  +N+ISWT +ISGY+++    +A+  F E   LG  
Sbjct: 291 NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWK 350

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D     +V+  C     LE G Q+H + IK    SD  +   L+D+YAK   L  A+ +
Sbjct: 351 PDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKV 410

Query: 419 LDGFSCKYTAEFNAILSGF--MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            D  + +    +NA++ G+   EK+++  E    LF + R+   +P+  TF+ L++ +++
Sbjct: 411 FDVMAEQNVISYNAMIEGYSSQEKLSEALE----LFHEMRVRLQKPNEFTFAALITAASN 466

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
            A L  G+  H   +K G      V NAL+ MYAKCGSI+ A ++F     RD+V WN+M
Sbjct: 467 LASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSM 526

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S +A HG  + AL +F EM +EG  P+ ++ + VL AC ++G  E G+  FN +   +G
Sbjct: 527 ISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FG 585

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           ++P  EH+AC+V LLGR+G+L EA   I   P   + ++WR+L+S  ++  N +    A+
Sbjct: 586 IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAA 645

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           +  +  +PKD+GS+IL+SN++A +GM  +  KVR  M+   + KE G SWIE+++K++ F
Sbjct: 646 EMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVF 705

Query: 717 VASGKDHPESEEIYSKLDLLNDEMKLK--VKDSSAFELQD 754
           +A    H E+ +I S LD+L   +K    V D++A  + D
Sbjct: 706 IARDTTHREA-DIGSVLDILIQHIKGAGYVPDATALLMND 744



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 167/325 (51%), Gaps = 9/325 (2%)

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
           +  P    F N++ +      +   K +HG  +  G+  +  + N ++ +  K    + A
Sbjct: 44  NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL----GICCDSSCLATVIDG 370
             +FD +  +NLI+W++++S Y + G+  +A+   + F+DL    G   +   LA+VI  
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEAL---MVFVDLQRKSGEHPNEFVLASVIRA 160

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+    +E G QLHGF ++ G+  DV +GT+L+D Y+K G+++ AR++ D  S K    +
Sbjct: 161 CTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTW 220

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
             I++G+ +         + LF+Q R   + PD    S +LS  +    L  G+ +HAY 
Sbjct: 221 TTIIAGYTK--CGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV 278

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           ++ G   DV V N LI  Y KC  +    ++F  +  ++I+SW  M+S Y  +     A+
Sbjct: 279 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAM 338

Query: 551 LLFEEMKREGFAPDDISILGVLQAC 575
            LF EM R G+ PD  +   VL +C
Sbjct: 339 KLFGEMNRLGWKPDGFACTSVLTSC 363


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/678 (34%), Positives = 377/678 (55%), Gaps = 2/678 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G  D  LG  VH   ++ G +ND    + L+++Y+K  +LD A ++F  M  R+
Sbjct: 144 VLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERN 203

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W+++I GY+ +  +   L +  DM +     ++ T + +  +C+ L     G Q+H 
Sbjct: 204 LVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHG 263

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            A+KS F  +  +GT+ + MY       +A  VF  L     +  N +I+ Y +  +   
Sbjct: 264 HALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLK 323

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  L  +    ++ + +  ++ C    G  EG QLHGLAVK G+   I V N I+ 
Sbjct: 324 ALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILD 383

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MYGK G   EA  +FD +  R+ +SW A+I+ + ++    K ++ F+  L   +  D   
Sbjct: 384 MYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFT 443

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
             +V+  C+    L  G+++HG  +K G   D  +G+ALVD+Y K G L  A  + D   
Sbjct: 444 YGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE 503

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K T  +N+I+SGF  +     E+    FSQ    G+ PD  T++ +L + A+ A +  G
Sbjct: 504 EKTTVSWNSIISGFSSQ--KQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELG 561

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +HA  +K    +DV + + L+ MY+KCG++  +  +F+    RD V+W+AM+ AYA H
Sbjct: 562 KQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYH 621

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G+ A+ LFEEM+     P+    + VL+AC + G  + G+  F  ++  YGL P +EH
Sbjct: 622 GHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEH 681

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           ++CMVDLLGR+ +++EA+ LI S  F    ++WRTL+S  K+  N + +  A   LL L+
Sbjct: 682 YSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLD 741

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P+D+ +++L++N+YA  GM  E AK+R+ M + +L KE GCSWIE+  ++H F+   K H
Sbjct: 742 PQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAH 801

Query: 724 PESEEIYSKLDLLNDEMK 741
           P SEEIY +  LL DEMK
Sbjct: 802 PRSEEIYEQTHLLVDEMK 819



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 163/600 (27%), Positives = 276/600 (46%), Gaps = 11/600 (1%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
             D    N +I  YA+   +  AQ LFD M  R  ++W SL+  YL +G     + I   
Sbjct: 69  HRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M   +   +  T SV+L+ACS +ED   G Q+H  AI+ GFEN+V  G++L+ MY     
Sbjct: 129 MRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
              A  +FR +  +++ C + +I  Y +         +F  +L      +  T+ +V   
Sbjct: 189 LDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C      + G QLHG A+K     +  +G A + MY K     +A ++F+ +      S+
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSY 308

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            A+I GY R   G KA+  F       +  D   L+  +  CSV      G+QLHG A+K
Sbjct: 309 NAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVK 368

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV- 448
            G   ++ +   ++D+Y K G L  A  + D    +    +NAI++   +    +EE V 
Sbjct: 369 CGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQ----NEEIVK 424

Query: 449 -MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
            + LF     + MEPD  T+  ++   A Q  L  G  +H   +K+G   D  VG+AL+ 
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVD 484

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY KCG +  A +I   + ++  VSWN+++S ++     + A   F +M   G  PD+ +
Sbjct: 485 MYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFT 544

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
              VL  C      E G  +  +I ++  L   +   + +VD+  + G + ++  +   +
Sbjct: 545 YATVLDVCANMATIELGKQIHAQILKL-NLHSDVYIASTLVDMYSKCGNMQDSRLMFEKT 603

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSI--LASKRLLDLEPKDAGSFILVSNMYAGQGMLDE 685
           P     + W  ++       + + +I      +LL+++P     FI V    A  G +D+
Sbjct: 604 P-KRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHT-IFISVLRACAHMGYVDK 661



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 246/523 (47%), Gaps = 57/523 (10%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S IL+ CS L+    G+Q HA  I + F   ++V   L+  Y  S     A  VF  +
Sbjct: 8   TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67

Query: 221 AYKDVRCVNFMILEYNKAGE-------------------------------SEMAFHVFV 249
            ++DV   N MI  Y + G                                +  +  +FV
Sbjct: 68  PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 250 HLLSSDFEPNDY-TFTNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNAIVTMY 305
            + S    P+DY TF+ V+  C    G+E+   G Q+H LA++ G   ++  G+A+V MY
Sbjct: 128 RMRSLKI-PHDYATFSVVLKACS---GIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K    + A R+F  + ERNL+ W+A+I+GYV++    + +  F + L +G+    S  A
Sbjct: 184 SKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +V   C+  S  +LG QLHG A+K  +  D  +GTA +D+YAK   +  A  + +     
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +NAI+ G+  +  D     + +F   +   +  D ++ S  L+  +     + G  
Sbjct: 304 PRQSYNAIIVGYARQ--DQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ 361

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           LH  ++K G   ++ V N ++ MY KCG++  A  IF  +  RD VSWNA+++A+  +  
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEE 421

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI----- 600
               L LF  M R    PDD +   V++AC        G    N   +I+G R +     
Sbjct: 422 IVKTLSLFVSMLRSTMEPDDFTYGSVVKAC-------AGQQALNYGMEIHG-RIVKSGMG 473

Query: 601 LEHF--ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           L+ F  + +VD+ G+ G L EA   I+     ++ + W +++S
Sbjct: 474 LDWFVGSALVDMYGKCGMLMEAEK-IHDRLEEKTTVSWNSIIS 515



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 233/510 (45%), Gaps = 54/510 (10%)

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH------------ 308
           +TF++++  C     +  GKQ H   +    V  I V N +V  Y K             
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 309 --------------GMSEE-----AERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
                         G +E      A+ +FD + ER+++SW +L+S Y+ +G   K+I  F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
           +    L I  D +  + V+  CS   +  LGLQ+H  AI+ G+ +DV  G+ALVD+Y+K 
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
             L  A  +      +    ++A+++G+++   D   + + LF      GM     T++ 
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQN--DRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +    A  +    G  LH +++K+ +A D I+G A + MYAKC  +  A+++F  + +  
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLF 588
             S+NA++  YA    G  AL +F+ ++R   + D+IS+ G L AC +  G  EG     
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEG----- 359

Query: 589 NEIEQIYGL--RPILEHFAC----MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
               Q++GL  +  L    C    ++D+ G+ G L EA  + +     ++ + W  +++ 
Sbjct: 360 ---IQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDA-VSWNAIIAA 415

Query: 643 SKLMAN--SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV--RTTMNDLRL 698
            +         S+  S     +EP D  ++  V    AGQ  L+   ++  R   + + L
Sbjct: 416 HEQNEEIVKTLSLFVSMLRSTMEPDDF-TYGSVVKACAGQQALNYGMEIHGRIVKSGMGL 474

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
               G + +++  K    + + K H   EE
Sbjct: 475 DWFVGSALVDMYGKCGMLMEAEKIHDRLEE 504


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/679 (34%), Positives = 381/679 (56%), Gaps = 8/679 (1%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSG--SQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +L++  I  GD + G+AVHA +++ G  +Q DTF AN L+NLYAK   L  A++LFDGM 
Sbjct: 52  RLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMP 111

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ +++ +L++GY   G +E   G+   + R   + N    + IL+    ++       
Sbjct: 112 ERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCC 171

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA A K G + N FVG+SLI  Y   G    A  VF G+ +KD      M+  Y++   
Sbjct: 172 IHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDI 231

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVI--SVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            E A + F  +  +  +PN +  T+V+  +VC  +  +  GK +HG AVK     E  VG
Sbjct: 232 PEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVL--GKGIHGCAVKTLCDTEPHVG 289

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A++ MY K G  E+A  +F+ I   ++I W+ LIS Y +S    +A   FL  +   + 
Sbjct: 290 GALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVV 349

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +   L+ V+  C+  + L+LG Q+H   IK GY S++ +G AL+D+YAK  +++++  +
Sbjct: 350 PNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEI 409

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                      +N I+ G+ +  +   ED + +F + R A +    VTFS +L   A+ A
Sbjct: 410 FRSLRDANEVSWNTIIVGYCQ--SGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTA 467

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            +     +H+   K+ +  D IV N+LI  YAKCG I  A ++F+ I   D+VSWNA++S
Sbjct: 468 SIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIIS 527

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            YALHG    AL LF  M +    P+D++ + +L  C  +GL   G+ LFN +   + ++
Sbjct: 528 GYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIK 587

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P ++H+ C+V LLGRAGRL++A+  I   P + SP++WR L+S   +  N      ++++
Sbjct: 588 PSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEK 647

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           +L++EP+D  +++L+SNMYA  G+LD+ A +R +M ++ + KE G SW+EI  ++H F  
Sbjct: 648 VLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSV 707

Query: 719 SGKDHPESEEIYSKLDLLN 737
              DHP+   I + L+ LN
Sbjct: 708 GSADHPDMRIINAMLEWLN 726



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/544 (23%), Positives = 254/544 (46%), Gaps = 11/544 (2%)

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG--FENNVFVGTSLISMYFHSGCFREA 213
           K + + C+ +L+ C    D   G  +HA  ++ G   + + F    L+++Y   G    A
Sbjct: 44  KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAA 103

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
             +F G+  +++     ++  Y   G  E A  +F  L     E N +  T ++ V    
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
                   +H  A K G  R   VG++++  Y   G    A  +FD I  ++ ++WTA++
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
           S Y  +     A+N F +    G   +   L +V+      S+  LG  +HG A+K    
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCD 283

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           ++  +G AL+D+YAK G ++ AR + +         ++ ++S + +   +  E    +F 
Sbjct: 284 TEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQN--EQAFEMFL 341

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           +   + + P+  + S +L   A+ A L  G+ +H   IK GY +++ VGNAL+ +YAKC 
Sbjct: 342 RMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCR 401

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           +++ + +IF+ + D + VSWN ++  Y   G  + AL +F+EM+        ++   VL+
Sbjct: 402 NMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLR 461

Query: 574 ACIYSGLSEGGICLFNEIEQ-IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
           AC  +   +  + + + IE+  +    I+ +   ++D   + G + +A+ +  S      
Sbjct: 462 ACANTASIKHTVQIHSLIEKSTFNNDTIVCN--SLIDTYAKCGCIRDALKVFESI-IQCD 518

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRL--LDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
            + W  ++S   L   +  ++    R+   D +P D  +F+ + ++    G++++   + 
Sbjct: 519 VVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDV-TFVALLSVCGSTGLVNQGLSLF 577

Query: 691 TTMN 694
            +M 
Sbjct: 578 NSMT 581


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/679 (34%), Positives = 381/679 (56%), Gaps = 8/679 (1%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSG--SQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           + ++  I  GD + G+AVHA +++ G  +Q DTF AN L+N YAK   L  A++LFDGM 
Sbjct: 50  RFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMP 109

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ +++ +L++GY   G++E  L +   + R   + N    + IL+    ++       
Sbjct: 110 ERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACG 169

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA A K G + N FVGT+LI  Y   G    A  VF G+  KD      M+  Y++   
Sbjct: 170 IHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDI 229

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVI--SVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            E A + F  +  + F+PN +  T+ +  +VC  +  +  GK +HG +VK     E  VG
Sbjct: 230 PEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALL--GKGIHGCSVKTLYDTEPHVG 287

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A++ MY K G  E+A  +F+ I   ++I W+ LIS Y +S    +A   FL  +   + 
Sbjct: 288 GALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVV 347

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +   L+ V+  C+  + LELG Q+H  AIK GY S++ +G AL+D+YAK  +++++  +
Sbjct: 348 PNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEI 407

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                      +N I+ G+ +  +   ED + +F + R A M    VTFS +L   A+ +
Sbjct: 408 FSSLQDANEVSWNTIIVGYCQ--SGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTS 465

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            +     +H+   K+ +  D IV N+LI  YAKCG I  A ++F+ I + D+VSWN+++S
Sbjct: 466 SIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIIS 525

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           AYALHG    AL LF+ M +     +D++ + +L  C  +GL   G+ LFN +   + ++
Sbjct: 526 AYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIK 585

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P +EH+ C+V LLGRAGRL++A+  I   P + SP++WR L+S   +  N      A+++
Sbjct: 586 PSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEK 645

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           +LD+EP D  +++L+SNMYA  G+LDE A  R +M ++ + KEAG SW+EI  ++H F  
Sbjct: 646 VLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSV 705

Query: 719 SGKDHPESEEIYSKLDLLN 737
              DHP+   I + L+ LN
Sbjct: 706 GSADHPDMRIINAMLEWLN 724



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 205/440 (46%), Gaps = 4/440 (0%)

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG--FENNVFVGTSLISMYFHSGCFREA 213
           K + + C+  L+ C    D   G  +HA  ++ G   + + F    L++ Y   G    A
Sbjct: 42  KLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATA 101

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
             +F G+  ++      ++  Y   GE E A  +F  L     E N +  T ++ V    
Sbjct: 102 RRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTM 161

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
                   +H  A K G  R   VG A++  Y   G    A  +FD I  ++ ++WTA++
Sbjct: 162 DAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMV 221

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
           S Y  +     A+N F +    G   +   L + +      S+  LG  +HG ++K  Y 
Sbjct: 222 SCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYD 281

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           ++  +G AL+D+YAK GD++ A  + +         ++ ++S + +   +  E    +F 
Sbjct: 282 TEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQN--EQAFEMFL 339

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           +   + + P+  + S +L   A+ A L  G  +H  +IK GY +++ VGNAL+ MYAKC 
Sbjct: 340 RMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCR 399

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           +++ + +IF  + D + VSWN ++  Y   G  + AL +F EM+        ++   VL+
Sbjct: 400 NMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLR 459

Query: 574 ACIYSGLSEGGICLFNEIEQ 593
           AC  +   +  + + + IE+
Sbjct: 460 ACANTSSIKHAVQIHSLIEK 479


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/668 (34%), Positives = 379/668 (56%), Gaps = 2/668 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+ G+ VHA  +K G  +D F  + L++LYAK   + +A+++F  M  ++A++W +L+ 
Sbjct: 244 DLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLN 303

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G+   GD E VL + C M  SE  F++ T S +L+ C+   +   G+ +H+ AI+ G E 
Sbjct: 304 GFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCEL 363

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           + F+   L+ MY   G   +A  VF  +   DV   + +I   ++ G+S  A  VF  + 
Sbjct: 364 DEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMR 423

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S   PN +T  +++S   +   +  G+ +H    K+G   + +V NA+VTMY K G  +
Sbjct: 424 HSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQ 483

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +  R+F+A + R+LISW AL+SG+  +      +  F + L  G   +     +++  CS
Sbjct: 484 DGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCS 543

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             S+++LG Q+H   +K+    +  +GTALVD+YAK   L+ A  + +    +    +  
Sbjct: 544 SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTV 603

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I++G+ +      E  +  F Q +  G++P+  T +  LS  +  A L  GR LH+ +IK
Sbjct: 604 IVAGYAQD--GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIK 661

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G + D+ V +AL+ MYAKCG ++ A  +F G+  RD VSWN ++  Y+ HG G  AL  
Sbjct: 662 AGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKA 721

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           FE M  EG  PD+++ +GVL AC + GL E G   FN + +IYG+ P +EH+ACMVD+LG
Sbjct: 722 FEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILG 781

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG+  E  + I     + + L+W T++   K+  N +F   A+ +L +LEP+   ++IL
Sbjct: 782 RAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYIL 841

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SNM+A +GM D+   VR  M+   + KE GCSW+E++ ++H F++    HP+  EI+ K
Sbjct: 842 LSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLK 901

Query: 733 LDLLNDEM 740
           L  L+ ++
Sbjct: 902 LQDLHQKL 909



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 165/626 (26%), Positives = 316/626 (50%), Gaps = 5/626 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +++     GDL  G+A+H  ++KSG   D+   N+L+N+YAK    + A K+F  +  R 
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++WT+LI G++ +G     + + C+M R   + NE T +  L+ACS+  D  FG+Q+HA
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK G  +++FVG++L+ +Y   G    AE VF  +  ++    N ++  + + G++E 
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
             ++F  +  S+   + +T + V+  C  +  +  G+ +H LA++ G   +  +   +V 
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G++ +A ++F  I + +++SW+A+I+   + G   +A   F      G+  +   
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           LA+++   +   +L  G  +H    K+G+  D  +  ALV +Y K G ++    + +  +
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +NA+LSGF +    D    + +F+Q    G  P+  TF  +L   +S + +  G
Sbjct: 494 NRDLISWNALLSGFHDNETCDTG--LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 551

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +HA  +K     +  VG AL+ MYAK   ++ A  IF  +  RD+ +W  +++ YA  
Sbjct: 552 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 611

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G+ A+  F +M+REG  P++ ++   L  C      + G  L + +    G    +  
Sbjct: 612 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL-HSMAIKAGQSGDMFV 670

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL- 662
            + +VD+  + G + +A  ++     S   + W T++           ++ A + +LD  
Sbjct: 671 ASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEG 729

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAK 688
              D  +FI V +  +  G+++E  K
Sbjct: 730 TVPDEVTFIGVLSACSHMGLIEEGKK 755



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 207/413 (50%), Gaps = 2/413 (0%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           S +L  C+   D   G+ IH   IKSG   +  +  SL+++Y   G    A  VF  +  
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +DV     +I  +   G    A ++F  +     E N++T+   +  C   L +E GKQ+
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H  A+K G   ++ VG+A+V +Y K G    AER+F  + ++N +SW AL++G+ + G  
Sbjct: 252 HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDA 311

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            K +N F       I      L+TV+ GC+   NL  G  +H  AI+ G   D  +   L
Sbjct: 312 EKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCL 371

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y+K G    A  +           ++AI++   +K      +   +F + R +G+ P
Sbjct: 372 VDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQK--GQSREAAEVFKRMRHSGVIP 429

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           +  T + L+S +     L  G S+HA   K G+  D  V NAL+TMY K GS+    ++F
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVF 489

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +  ++RD++SWNA+LS +  +      L +F +M  EGF P+  + + +L++C
Sbjct: 490 EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSC 542



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 172/312 (55%), Gaps = 2/312 (0%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           ++ ++  C     + EGK +HG  +K G+  +  + N++V +Y K G +  A ++F  I 
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ER+++SWTALI+G+V  G+G  A+N F E    G+  +    AT +  CS+C +LE G Q
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H  AIK G  SD+ +G+ALVD+YAK G++  A  +      +    +NA+L+GF +   
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQ--M 308

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
            D E V+ LF +   + +     T S +L   A+   L  G+ +H+ +I+ G   D  + 
Sbjct: 309 GDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFIS 368

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
             L+ MY+KCG    A ++F  I D D+VSW+A+++     G  + A  +F+ M+  G  
Sbjct: 369 CCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVI 428

Query: 563 PDDISILGVLQA 574
           P+  ++  ++ A
Sbjct: 429 PNQFTLASLVSA 440



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 19/279 (6%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           +S +L   AS+  L  G+++H   IK+G   D  + N+L+ +YAKCGS + A ++F  I 
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           +RD+VSW A+++ +   G G GA+ LF EM+REG   ++ +    L+AC      E G  
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
           +  E  ++     +    A +VDL  + G +  A  +    P  ++ + W  L++    M
Sbjct: 251 VHAEAIKVGDFSDLFVGSA-LVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALLNGFAQM 308

Query: 647 ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
            +       ++++L+L  +  GS I  S        L    K      +LR  +      
Sbjct: 309 GD-------AEKVLNLFCRMTGSEINFSKF-----TLSTVLKGCANSGNLRAGQIVHSLA 356

Query: 707 IEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVK 745
           I I  +L  F++         ++YSK  L  D +K+ V+
Sbjct: 357 IRIGCELDEFISCCL-----VDMYSKCGLAGDALKVFVR 390


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/680 (34%), Positives = 372/680 (54%), Gaps = 4/680 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L LG  VHA  +K+G + D    + L+++Y K   LD A   F GM  R+ ++W + I 
Sbjct: 164 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 223

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G + +  Y   L +  +M R     ++ + +    +C+ +     G Q+HA AIK+ F +
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  VGT+++ +Y  +    +A   F GL    V   N M++   +AG    A  +F  ++
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S    +  + + V S C E  G  +G+Q+H LA+K G   +I V NA++ +YGK     
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 403

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA  +F  + +++ +SW A+I+   ++GH    I  F E L  G+  D     +V+  C+
Sbjct: 404 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +LE GL +H   IK G  SD  + + +VD+Y K G +  A+ L D    +    +NA
Sbjct: 464 ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNA 523

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ILSGF   +  + E+    FS+    G++PD  TF+ +L   A+ A +  G+ +H   IK
Sbjct: 524 ILSGF--SLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                D  + + L+ MYAKCG +  +  +F+ +  RD VSWNAM+  YALHGLG  AL +
Sbjct: 582 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 641

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           FE M++E   P+  + + VL+AC + GL + G   F+ +   Y L P LEHFACMVD+LG
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 701

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           R+    EA+  INS PF    ++W+TL+S+ K+  + + + LA+  +L L+P D+  +IL
Sbjct: 702 RSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYIL 761

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+YA  G   + ++ R  +   RL KE GCSWIE+ S++H F+   K HP S E+Y  
Sbjct: 762 LSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEM 821

Query: 733 LDLLNDEMKLK--VKDSSAF 750
           L+ L  EMKL     DS++F
Sbjct: 822 LNDLIGEMKLSGYEPDSASF 841



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 231/486 (47%), Gaps = 2/486 (0%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           + DT   N ++  Y+    +  A  LFDGM     ++W +L+ GY   G ++  + +  +
Sbjct: 80  RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVE 139

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M R     +  T +V+L++CS LE+   G Q+HA A+K+G E +V  G++L+ MY     
Sbjct: 140 MARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 199

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             +A   F G+  ++       I    +  +      +F+ +       +  ++ +    
Sbjct: 200 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C     +  G+QLH  A+K     +  VG AIV +Y K     +A R F  +    + + 
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            A++ G VR+G G +A+  F   +   I  D   L+ V   C+       G Q+H  AIK
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            G+  D+ +  A++D+Y K   L  A ++  G   K +  +NAI++   +    D  D +
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD--DTI 437

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
           + F++    GM+PD  T+  +L   A+   L  G  +H   IK+G  +D  V + ++ MY
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 497

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
            KCG ID A ++   I  + +VSWNA+LS ++L+   + A   F EM   G  PD  +  
Sbjct: 498 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFA 557

Query: 570 GVLQAC 575
            VL  C
Sbjct: 558 TVLDTC 563



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            ++++ Y H+G    A  +F G+   DV   N ++  Y + G  + +  +FV +      
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+  TF  ++  C     +  G Q+H LAVK G+  ++  G+A+V MYGK    ++A   
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F  + ERN +SW A I+G V++    + +  F+E   LG+       A+    C+  S L
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 266

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
             G QLH  AIK+ + SD  +GTA+VD+YAK   L  AR    G         NA++ G 
Sbjct: 267 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 326

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           +   A    + M LF     + +  D V+ S + S  A      +G+ +H  +IK+G+  
Sbjct: 327 VR--AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 384

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D+ V NA++ +Y KC ++  A+ IF+G+  +D VSWNA+++A   +G     +L F EM 
Sbjct: 385 DICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEML 444

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
           R G  PDD +   VL+AC      E G+ + +++ +  GL       + +VD+  + G +
Sbjct: 445 RFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGII 503

Query: 618 SEAMNL 623
            EA  L
Sbjct: 504 DEAQKL 509



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 163/322 (50%), Gaps = 23/322 (7%)

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
           R+    N ++T Y   G    A  +FD + + +++SW AL+SGY + G   ++++ F+E 
Sbjct: 81  RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
              G+  D +  A ++  CS    L LG+Q+H  A+K G   DVR G+ALVD+Y K   L
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 200

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV--MVLFSQQRLAGMEPDPVTFSRL 470
             A     G   +    + A ++G ++    +E+ V  + LF + +  G+     +++  
Sbjct: 201 DDALCFFYGMPERNWVSWGAAIAGCVQ----NEQYVRGLELFIEMQRLGLGVSQPSYASA 256

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
               A+ +CL  GR LHA++IK  +++D +VG A++ +YAK  S+  A + F G+ +  +
Sbjct: 257 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 316

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC--------------- 575
            + NAM+      GLG  A+ LF+ M R     D +S+ GV  AC               
Sbjct: 317 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 376

Query: 576 -IYSGLSEGGICLFNEIEQIYG 596
            I SG  +  IC+ N +  +YG
Sbjct: 377 AIKSGF-DVDICVNNAVLDLYG 397


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/682 (32%), Positives = 372/682 (54%), Gaps = 2/682 (0%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           D+ +L++  + + DL +G+ VH  +L+ G + + +  N L+ LYA    ++ A++LFD  
Sbjct: 30  DYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKF 89

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             +S ++W  +I GY   G  +    +   M +   + ++ T   IL ACS      +G 
Sbjct: 90  SNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGR 149

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IH   +++G  N+  VG +LISMY   G  R+A  VF  +A +D      +   Y ++G
Sbjct: 150 EIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESG 209

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             E +   +  +L     P+  T+ NV+S C     +E+GKQ+H   V+     ++ V  
Sbjct: 210 YGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVST 269

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+  MY K G  ++A  +F+ +S R++I+W  +I G+V SG   +A   F   L+ G+  
Sbjct: 270 ALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAP 329

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D +   TV+  C+    L  G ++H  A K G +SDVR G AL+++Y+K G +K AR + 
Sbjct: 330 DRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVF 389

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    +    +  +L  + +   D   +    F Q    G++ + +T+  +L   ++   
Sbjct: 390 DRMPKRDVVSWTTLLGRYAD--CDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVA 447

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  G+ +HA  +K G  AD+ V NAL++MY KCGS++ A ++F+G+S RD+V+WN ++  
Sbjct: 448 LKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGG 507

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
              +G G  AL  +E MK EG  P+  + + VL AC    L E G   F  + + YG+ P
Sbjct: 508 LGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVP 567

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             +H+ACMVD+L RAG L EA ++I + P   S  +W  L++  ++  N +    A++  
Sbjct: 568 TEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHC 627

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           L LEP++AG ++ +S +YA  GM  + AK+R  M +  + KE G SWIEI  ++H FVA 
Sbjct: 628 LKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVAR 687

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
            + HP ++EIY++L+ L  +MK
Sbjct: 688 DQSHPRTQEIYAELETLKKQMK 709



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 227/426 (53%), Gaps = 2/426 (0%)

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           ++R   + + +    +L++C   +D   G+Q+H   ++ G + NV++  +L+ +Y H G 
Sbjct: 19  LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             EA  +F   + K V   N MI  Y   G ++ AF++F  +     EP+ +TF +++S 
Sbjct: 79  VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C     +  G+++H   ++ G+  + +VGNA+++MY K G   +A R+FDA++ R+ +SW
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           T L   Y  SG+G +++  +   L   +         V+  C   + LE G Q+H   ++
Sbjct: 199 TTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVE 258

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
             Y SDVR+ TAL  +Y K G  K AR + +  S +    +N ++ GF++  +   E+  
Sbjct: 259 SEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVD--SGQLEEAH 316

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
             F +    G+ PD  T++ +LS  A    L RG+ +HA + K G  +DV  GNALI MY
Sbjct: 317 GTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMY 376

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           +K GS+  A Q+F  +  RD+VSW  +L  YA       +   F++M ++G   + I+ +
Sbjct: 377 SKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYM 436

Query: 570 GVLQAC 575
            VL+AC
Sbjct: 437 CVLKAC 442


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/680 (34%), Positives = 372/680 (54%), Gaps = 4/680 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L LG  VHA  +K+G + D    + L+++Y K   LD A   F GM  R+ ++W + I 
Sbjct: 164 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 223

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G + +  Y   L +  +M R     ++ + +    +C+ +     G Q+HA AIK+ F +
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  VGT+++ +Y  +    +A   F GL    V   N M++   +AG    A  +F  ++
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S    +  + + V S C E  G  +G+Q+H LA+K G   +I V NA++ +YGK     
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 403

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA  +F  + +++ +SW A+I+   ++GH    I  F E L  G+  D     +V+  C+
Sbjct: 404 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +LE GL +H   IK G  SD  + + +VD+Y K G +  A+ L D    +    +NA
Sbjct: 464 ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNA 523

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ILSGF   +  + E+    FS+    G++PD  TF+ +L   A+ A +  G+ +H   IK
Sbjct: 524 ILSGF--SLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                D  + + L+ MYAKCG +  +  +F+ +  RD VSWNAM+  YALHGLG  AL +
Sbjct: 582 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 641

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           FE M++E   P+  + + VL+AC + GL + G   F+ +   Y L P LEHFACMVD+LG
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 701

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           R+    EA+  INS PF    ++W+TL+S+ K+  + + + LA+  +L L+P D+  +IL
Sbjct: 702 RSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYIL 761

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+YA  G   + ++ R  +   RL KE GCSWIE+ S++H F+   K HP S E+Y  
Sbjct: 762 LSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEM 821

Query: 733 LDLLNDEMKLK--VKDSSAF 750
           L+ L  EMKL     DS++F
Sbjct: 822 LNDLIGEMKLSGYEPDSASF 841



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 231/486 (47%), Gaps = 2/486 (0%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           + DT   N ++  Y+    +  A  LFDGM     ++W +L+ GY   G ++  + +  +
Sbjct: 80  RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVE 139

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M R     +  T +V+L++CS LE+   G Q+HA A+K+G E +V  G++L+ MY     
Sbjct: 140 MARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 199

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             +A   F G+  ++       I    +  +      +F+ +       +  ++ +    
Sbjct: 200 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C     +  G+QLH  A+K     +  VG AIV +Y K     +A R F  +    + + 
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            A++ G VR+G G +A+  F   +   I  D   L+ V   C+       G Q+H  AIK
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            G+  D+ +  A++D+Y K   L  A ++  G   K +  +NAI++   +    D  D +
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD--DTI 437

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
           + F++    GM+PD  T+  +L   A+   L  G  +H   IK+G  +D  V + ++ MY
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 497

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
            KCG ID A ++   I  + +VSWNA+LS ++L+   + A   F EM   G  PD  +  
Sbjct: 498 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFA 557

Query: 570 GVLQAC 575
            VL  C
Sbjct: 558 TVLDTC 563



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            ++++ Y H+G    A  +F G+   DV   N ++  Y + G  + +  +FV +      
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+  TF  ++  C     +  G Q+H LAVK G+  ++  G+A+V MYGK    ++A   
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F  + ERN +SW A I+G V++    + +  F+E   LG+       A+    C+  S L
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 266

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
             G QLH  AIK+ + SD  +GTA+VD+YAK   L  AR    G         NA++ G 
Sbjct: 267 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 326

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           +   A    + M LF     + +  D V+ S + S  A      +G+ +H  +IK+G+  
Sbjct: 327 VR--AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 384

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D+ V NA++ +Y KC ++  A+ IF+G+  +D VSWNA+++A   +G     +L F EM 
Sbjct: 385 DICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEML 444

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
           R G  PDD +   VL+AC      E G+ + +++ +  GL       + +VD+  + G +
Sbjct: 445 RFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGII 503

Query: 618 SEAMNL 623
            EA  L
Sbjct: 504 DEAQKL 509



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS-------IKTGYAADVIVGNALI 506
           QQ+   + P  VTFSR+      Q+C   GR   A         + +G+     V N L+
Sbjct: 5   QQQPPPVAPARVTFSRVF-----QSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLL 59

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MYA+C     A ++F  +  RD VSWN ML+AY+  G    A+ LF+ M      PD +
Sbjct: 60  QMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD----PDVV 115

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           S   ++      G+ +  + LF E+ +  G+ P    FA ++
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMAR-RGVSPDRTTFAVLL 156


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/680 (34%), Positives = 372/680 (54%), Gaps = 4/680 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L LG  VHA  +K+G + D    + L+++Y K   LD A   F GM  R+ ++W + I 
Sbjct: 206 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 265

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G + +  Y   L +  +M R     ++ + +    +C+ +     G Q+HA AIK+ F +
Sbjct: 266 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 325

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  VGT+++ +Y  +    +A   F GL    V   N M++   +AG    A  +F  ++
Sbjct: 326 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 385

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S    +  + + V S C E  G  +G+Q+H LA+K G   +I V NA++ +YGK     
Sbjct: 386 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 445

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA  +F  + +++ +SW A+I+   ++GH    I  F E L  G+  D     +V+  C+
Sbjct: 446 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 505

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +LE GL +H   IK G  SD  + + +VD+Y K G +  A+ L D    +    +NA
Sbjct: 506 ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNA 565

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ILSGF   +  + E+    FS+    G++PD  TF+ +L   A+ A +  G+ +H   IK
Sbjct: 566 ILSGF--SLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 623

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                D  + + L+ MYAKCG +  +  +F+ +  RD VSWNAM+  YALHGLG  AL +
Sbjct: 624 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 683

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           FE M++E   P+  + + VL+AC + GL + G   F+ +   Y L P LEHFACMVD+LG
Sbjct: 684 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 743

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           R+    EA+  INS PF    ++W+TL+S+ K+  + + + LA+  +L L+P D+  +IL
Sbjct: 744 RSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYIL 803

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+YA  G   + ++ R  +   RL KE GCSWIE+ S++H F+   K HP S E+Y  
Sbjct: 804 LSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEM 863

Query: 733 LDLLNDEMKLK--VKDSSAF 750
           L+ L  EMKL     DS++F
Sbjct: 864 LNDLIGEMKLSGYEPDSASF 883



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 231/486 (47%), Gaps = 2/486 (0%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           + DT   N ++  Y+    +  A  LFDGM     ++W +L+ GY   G ++  + +  +
Sbjct: 122 RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVE 181

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M R     +  T +V+L++CS LE+   G Q+HA A+K+G E +V  G++L+ MY     
Sbjct: 182 MARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 241

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             +A   F G+  ++       I    +  +      +F+ +       +  ++ +    
Sbjct: 242 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 301

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C     +  G+QLH  A+K     +  VG AIV +Y K     +A R F  +    + + 
Sbjct: 302 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 361

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            A++ G VR+G G +A+  F   +   I  D   L+ V   C+       G Q+H  AIK
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 421

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            G+  D+ +  A++D+Y K   L  A ++  G   K +  +NAI++   +    D  D +
Sbjct: 422 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD--DTI 479

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
           + F++    GM+PD  T+  +L   A+   L  G  +H   IK+G  +D  V + ++ MY
Sbjct: 480 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 539

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
            KCG ID A ++   I  + +VSWNA+LS ++L+   + A   F EM   G  PD  +  
Sbjct: 540 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFA 599

Query: 570 GVLQAC 575
            VL  C
Sbjct: 600 TVLDTC 605



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            ++++ Y H+G    A  +F G+   DV   N ++  Y + G  + +  +FV +      
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 188

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+  TF  ++  C     +  G Q+H LAVK G+  ++  G+A+V MYGK    ++A   
Sbjct: 189 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 248

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F  + ERN +SW A I+G V++    + +  F+E   LG+       A+    C+  S L
Sbjct: 249 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 308

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
             G QLH  AIK+ + SD  +GTA+VD+YAK   L  AR    G         NA++ G 
Sbjct: 309 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 368

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           +   A    + M LF     + +  D V+ S + S  A      +G+ +H  +IK+G+  
Sbjct: 369 VR--AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 426

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D+ V NA++ +Y KC ++  A+ IF+G+  +D VSWNA+++A   +G     +L F EM 
Sbjct: 427 DICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEML 486

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
           R G  PDD +   VL+AC      E G+ + +++ +  GL       + +VD+  + G +
Sbjct: 487 RFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGII 545

Query: 618 SEAMNL 623
            EA  L
Sbjct: 546 DEAQKL 551



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS-------IKTGYAADVIVGNALI 506
           QQ+   + P  VTFSR+      Q+C   GR   A         + +G+     V N L+
Sbjct: 47  QQQPPPVAPARVTFSRVF-----QSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLL 101

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MYA+C     A ++F  +  RD VSWN ML+AY+  G    A+ LF+ M      PD +
Sbjct: 102 QMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD----PDVV 157

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           S   ++      G+ +  + LF E+ +  G+ P    FA ++
Sbjct: 158 SWNALVSGYCQRGMFQESVDLFVEMAR-RGVSPDRTTFAVLL 198


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/678 (34%), Positives = 378/678 (55%), Gaps = 2/678 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G  D  LG  VH   ++ G +ND    + L+++Y+K  +LD A ++F  M  R+
Sbjct: 144 ILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERN 203

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W+++I GY+ +  +   L +  DM +     ++ T + +  +C+ L     G Q+H 
Sbjct: 204 LVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHG 263

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            A+KS F  +  +GT+ + MY       +A  VF  L     +  N +I+ Y +  +   
Sbjct: 264 HALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLK 323

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  L  ++   ++ + +  ++ C       EG QLHGLAVK G+   I V N I+ 
Sbjct: 324 ALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILD 383

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MYGK G   EA  +F+ +  R+ +SW A+I+ + ++    K ++ F+  L   +  D   
Sbjct: 384 MYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFT 443

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
             +V+  C+    L  G ++HG  IK G   D  +G+ALVD+Y K G L  A  +     
Sbjct: 444 YGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLE 503

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K T  +N+I+SGF  +     E+    FSQ    G+ PD  T++ +L + A+ A +  G
Sbjct: 504 EKTTVSWNSIISGFSSQ--KQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELG 561

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +HA  +K    +DV + + L+ MY+KCG++  +  +F+    RD V+W+AM+ AYA H
Sbjct: 562 KQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYH 621

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           GLG+ A+ LFEEM+     P+    + VL+AC + G  + G+  F ++   YGL P +EH
Sbjct: 622 GLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEH 681

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           ++CMVDLLGR+G+++EA+ LI S PF    ++WRTL+S  K+  N + +  A   LL L+
Sbjct: 682 YSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLD 741

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P+D+ +++L++N+YA  GM  E AK+R+ M + +L KE GCSWIE+  ++H F+   K H
Sbjct: 742 PQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAH 801

Query: 724 PESEEIYSKLDLLNDEMK 741
           P SEEIY +  LL DEMK
Sbjct: 802 PRSEEIYEQTHLLVDEMK 819



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 170/606 (28%), Positives = 279/606 (46%), Gaps = 23/606 (3%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           Q D    N LI  YA    +  AQ LFD M  R  ++W SL+  YL +G     + I   
Sbjct: 69  QRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M   +   +  T +VIL+ACS +ED   G Q+H  AI+ GFEN+V  G++L+ MY     
Sbjct: 129 MRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             +A  VFR +  +++ C + +I  Y +         +F  +L      +  T+ +V   
Sbjct: 189 LDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI-- 327
           C      + G QLHG A+K     +  +G A + MY K       ERMFDA    N +  
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAK------CERMFDAWKVFNTLPN 302

Query: 328 ----SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
               S+ A+I GY R   G KA++ F       +  D   L+  +  CSV      G+QL
Sbjct: 303 PPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQL 362

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           HG A+K G   ++ +   ++D+Y K G L  A ++ +    +    +NAI++   +    
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQ---- 418

Query: 444 DEEDV--MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
           +EE V  + LF     + MEPD  T+  ++   A Q  L  G  +H   IK+G   D  V
Sbjct: 419 NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFV 478

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
           G+AL+ MY KCG +  A +I   + ++  VSWN+++S ++     + A   F +M   G 
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGI 538

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            PD+ +   VL  C      E G  +  +I ++  L   +   + +VD+  + G + ++ 
Sbjct: 539 IPDNYTYATVLDVCANMATIELGKQIHAQILKL-QLHSDVYIASTLVDMYSKCGNMQDSR 597

Query: 622 NLINSSPFSESPLLWRTLVSVSKL--MANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
            +   +P     + W  ++       +     ++    +LL+++P     FI V    A 
Sbjct: 598 LMFEKAP-KRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHT-IFISVLRACAH 655

Query: 680 QGMLDE 685
            G +D+
Sbjct: 656 MGYVDK 661



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 248/525 (47%), Gaps = 61/525 (11%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S IL+ CS L+    G+Q+H   I +GF   ++V   L+  Y  S     A  VF  +
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67

Query: 221 AYKDVRCVNFMILEYNKAGESEMAF---------------------------------HV 247
             +DV   N +I  Y  AG   M F                                  +
Sbjct: 68  PQRDVISWNTLIFGY--AGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 248 FVHLLSSDFEPNDY-TFTNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNAIVT 303
           FV + S    P+DY TF  ++  C    G+E+   G Q+H LA++ G   ++  G+A+V 
Sbjct: 126 FVRMRSLKI-PHDYATFAVILKACS---GIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K    ++A R+F  + ERNL+ W+A+I+GYV++    + +  F + L +G+    S 
Sbjct: 182 MYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQST 241

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            A+V   C+  S  +LG QLHG A+K  +  D  +GTA +D+YAK   +  A  + +   
Sbjct: 242 YASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLP 301

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
                 +NAI+ G+  +  D     + +F   +   +  D ++ S  L+  +     + G
Sbjct: 302 NPPRQSYNAIIVGYARQ--DQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEG 359

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             LH  ++K G   ++ V N ++ MY KCG++  A  IF+ +  RD VSWNA+++A+  +
Sbjct: 360 IQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQN 419

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI--- 600
                 L LF  M R    PDD +   V++AC        G    N   +I+G R I   
Sbjct: 420 EEIVKTLSLFVSMLRSTMEPDDFTYGSVVKAC-------AGQQALNYGTEIHG-RIIKSG 471

Query: 601 --LEHF--ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             L+ F  + +VD+ G+ G L EA   I++    ++ + W +++S
Sbjct: 472 MGLDWFVGSALVDMYGKCGMLMEAEK-IHARLEEKTTVSWNSIIS 515



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 225/508 (44%), Gaps = 52/508 (10%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           TF++++  C     +  GKQ+H   +  G V  I V N ++  Y K      A ++FD +
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67

Query: 322 SERNLISWTALISGYVRSGHGG-------------------------------KAINGFL 350
            +R++ISW  LI GY   G+ G                               K+I  F+
Sbjct: 68  PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
               L I  D +  A ++  CS   +  LGLQ+H  AI+ G+ +DV  G+ALVD+Y+K  
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
            L  A  +      +    ++A+++G+++   D   + + LF      GM     T++ +
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQN--DRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
               A  +    G  LH +++K+ +A D I+G A + MYAKC  +  A+++F  + +   
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR 305

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
            S+NA++  YA    G  AL +F+ ++R     D+IS+ G L AC        GI     
Sbjct: 306 QSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGI----- 360

Query: 591 IEQIYGL--RPILEHFAC----MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
             Q++GL  +  L    C    ++D+ G+ G L EA  LI         + W  +++  +
Sbjct: 361 --QLHGLAVKCGLGFNICVANTILDMYGKCGALMEAC-LIFEEMERRDAVSWNAIIAAHE 417

Query: 645 LMAN--SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV--RTTMNDLRLSK 700
                    S+  S     +EP D  ++  V    AGQ  L+   ++  R   + + L  
Sbjct: 418 QNEEIVKTLSLFVSMLRSTMEPDDF-TYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDW 476

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEE 728
             G + +++  K    + + K H   EE
Sbjct: 477 FVGSALVDMYGKCGMLMEAEKIHARLEE 504



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 5/130 (3%)

Query: 460 MEP-DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           M P   +TFS +L   ++   L  G+ +H   I TG+   + V N L+  Y K   ++ A
Sbjct: 1   MNPTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYA 60

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
           F++F  +  RD++SWN ++  YA  G    A  LF+ M       D +S   +L   +++
Sbjct: 61  FKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPER----DVVSWNSLLSCYLHN 116

Query: 579 GLSEGGICLF 588
           G++   I +F
Sbjct: 117 GVNRKSIEIF 126


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/665 (33%), Positives = 375/665 (56%), Gaps = 2/665 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +H   +K G   D    + L+++YAK  +LD + + F  M  ++ ++W+++I G + 
Sbjct: 193 GIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQ 252

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           + D    L +  +M ++    ++ T + +  +C+ L     G Q+H  A+K+ F  +V +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GT+ + MY       +A+ +F  L   +++  N +I+ Y ++ +   A  +F  L  S  
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 372

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
             ++ + +     C    G  EG Q+HGL++K      I V NAI+ MYGK G   EA  
Sbjct: 373 GLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACL 432

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F+ +  R+ +SW A+I+ + ++G+  K ++ F+  L  G+  D     +V+  C+    
Sbjct: 433 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 492

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G+++H   IK     D  +G AL+D+Y+K G ++ A  L D  + +    +NAI+SG
Sbjct: 493 LNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISG 552

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F   +    E+    FS+    G++PD  T++ +L   A+   +  G+ +HA  IK    
Sbjct: 553 F--SLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQ 610

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           +D  + + L+ MY+KCG++     IF+   +RD V+WNAM+  YA HGLG+ AL +FE M
Sbjct: 611 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM 670

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           + E   P+  + L VL+AC + GL E G+  F+ +   YGL P LEH++C+VD++GR+G+
Sbjct: 671 QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQ 730

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           +S+A+ LI   PF    ++WRTL+S+ K+  N + +  A+  +L LEP+D+ +++L+SN+
Sbjct: 731 VSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNI 790

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA  GM +E  K+R  M    L KE GCSWIEI S++H F+   K HP S+EIY  LD+L
Sbjct: 791 YANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVL 850

Query: 737 NDEMK 741
            DEMK
Sbjct: 851 TDEMK 855



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 172/578 (29%), Positives = 278/578 (48%), Gaps = 28/578 (4%)

Query: 18  QSLPPLKKKVPINTFS-----PNPKSQVAYL---CSISSVSCS-----ERTLLFNDWPQ- 63
           QS  P K  +PI+ FS     P  K   +++   CS     C       R +L    P  
Sbjct: 19  QSKSPFKT-LPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTV 77

Query: 64  -----LVKISIGSGDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFD 117
                L+++ I   DL+      AF +  G  Q DT   N ++  YA    + VAQKLFD
Sbjct: 78  FVTNCLIQMYIKCSDLEF-----AFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFD 132

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  R  ++W SLI GYL +GD+  V+ +   M R    F+  T +V+L++CS LED   
Sbjct: 133 AMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGG 192

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G QIH  A+K GF+ +V  G++L+ MY        +   F  +  K+    + +I    +
Sbjct: 193 GIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQ 252

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
             +      +F  +  +    +  TF +V   C     +  G QLHG A+K     ++ +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G A + MY K     +A+++F+++   NL S+ A+I GY RS  G +A+  F      G+
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 372

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   L+     C+V      GLQ+HG ++K    S++ +  A++D+Y K G L  A +
Sbjct: 373 GLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACL 432

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +    +    +NAI++   +    +EE  + LF     +GMEPD  T+  +L   A  
Sbjct: 433 VFEEMVSRDAVSWNAIIAAHEQN--GNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGW 490

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  G  +H   IK+    D  VG ALI MY+KCG ++ A ++   ++++ +VSWNA++
Sbjct: 491 QALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAII 550

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           S ++L    + A   F +M   G  PD+ +   +L  C
Sbjct: 551 SGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC 588



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 245/479 (51%), Gaps = 8/479 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G   L+LG  +H   LK+    D       +++Y K N L  AQKLF+ +   +  ++ +
Sbjct: 287 GLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNA 346

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I GY         LG+   + +S    +E + S    AC++++  + G Q+H  ++KS 
Sbjct: 347 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSL 406

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            ++N+ V  +++ MY   G   EA  VF  +  +D    N +I  + + G  E    +FV
Sbjct: 407 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 466

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +L S  EP+++T+ +V+  C     +  G ++H   +K  +  +  VG A++ MY K G
Sbjct: 467 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCG 526

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           M E+AE++ D ++E+ ++SW A+ISG+       +A   F + L++G+  D+   AT++D
Sbjct: 527 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 586

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+    +ELG Q+H   IK    SD  + + LVD+Y+K G+++  +++ +    +    
Sbjct: 587 TCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVT 646

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA++ G+ +      E+ + +F   +L  ++P+  TF  +L        + +G  LH +
Sbjct: 647 WNAMVCGYAQHGLG--EEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKG--LHYF 702

Query: 490 -SIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
            S+ + Y  D  + +   ++ +  + G +  A ++ +G+  + D V W  +LS   +HG
Sbjct: 703 HSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHG 761


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/698 (33%), Positives = 384/698 (55%), Gaps = 6/698 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   GS D  LG+ +H  ++K G   D F  N LI +Y KF  +D A K+F  M 
Sbjct: 34  FPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMP 93

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFG 178
           VR+ ++W S+I G+ ++G  +    +  +M   EE    +  T   +L  C+   D   G
Sbjct: 94  VRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMG 153

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            +IH  A+K G   +V V  SL+ MY   G   EA+ +F     K+    N MI      
Sbjct: 154 IRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTK 213

Query: 239 GESEMAFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           G    AF++F  + +  D E N+ T  N++  C E   +   K+LHG +++ G   +  V
Sbjct: 214 GYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELV 273

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N  V  Y K GM   AER+F ++  + + SW ALI G  ++G   KA+N +++    G+
Sbjct: 274 ANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGL 333

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   + +++   +   +L  G ++HGF ++HG   D  +G +L+ +Y   G+  SAR+
Sbjct: 334 VPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARL 393

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L DG   K +  +NA++SG+ +      ED ++LF +    G +P  +    +L   + Q
Sbjct: 394 LFDGMEEKSSVSWNAMISGYSQN--GLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQ 451

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           + L  G+  H Y++K     DV V  + I MYAK G I  +  +F G+ ++D+ SWNA++
Sbjct: 452 SALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAII 511

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +AY +HG G+ ++ LFE M++ G  PD  + +G+L  C ++GL E G+  FNE++  +G+
Sbjct: 512 AAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGI 571

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P LEH+AC++D+LGRAGRL +A+ L++  P      +W +L+S  +     +   + ++
Sbjct: 572 EPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAE 631

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +LL+LEPK+  +++ +SN+YAG G  D+  +VR  + D+ L K+AGCSWIE+  K+H FV
Sbjct: 632 KLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFV 691

Query: 718 ASGKDHPESEEIYSKLDLLNDEM-KLKVKDSSAFELQD 754
           A     P+S+E+      L  +M K+  K +++  L D
Sbjct: 692 AGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHD 729



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 287/583 (49%), Gaps = 31/583 (5%)

Query: 147 ACDMYR---SEEKFN--EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI 201
           A DM+    ++ +FN    T   +++AC+   DR  GE IH   IK G   +VFVG +LI
Sbjct: 14  AIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALI 73

Query: 202 SMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD--FEPN 259
           +MY   G    A  VF  +  +++   N +I  +++ G S+  F + V +++ +    P+
Sbjct: 74  AMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPD 133

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T   V+ VC   + V+ G ++HGLAVK G+  ++ V N++V MY K G   EA+ +FD
Sbjct: 134 IATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFD 193

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVCSNLE 378
             + +N +SW  +I G    G+  +A N F E  +   I  +   +  ++  C   S L 
Sbjct: 194 KNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLR 253

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
              +LHG++I+HG+  D  +    V  YAK G L  A  +      K    +NA++ G  
Sbjct: 254 SLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCA 313

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
           +    D    + L+ Q   +G+ PD  T   LL  SA    L  G+ +H + ++ G   D
Sbjct: 314 QN--GDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEID 371

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
             +G +L+++Y  CG    A  +F G+ ++  VSWNAM+S Y+ +GL + AL+LF ++  
Sbjct: 372 SFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVS 431

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH---FAC-MVDLLGRA 614
           +GF P DI+++ VL AC     S+       +    Y L+ +L      AC  +D+  ++
Sbjct: 432 DGFQPSDIAVVSVLGAC-----SQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKS 486

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL-EPKDAGSFILV 673
           G + E+ ++ +    ++    W  +++   +  + + SI   +R+  + +  D  +FI +
Sbjct: 487 GCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGI 545

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
             + +  G+++E  K    M +             I+ KL H+
Sbjct: 546 LTVCSHAGLVEEGLKYFNEMQNFH----------GIEPKLEHY 578


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/632 (34%), Positives = 352/632 (55%), Gaps = 2/632 (0%)

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           +++A++LF GM  ++ ++W +L+ GY   GD + VL + C M   E KF++ T S +L+ 
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C+       G+ +HA A++SG E + F+G SL+ MY   G   +A  VF  +   DV   
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           + MI   ++ G  + A  +F  +      PN +T ++++S       +  G+ +HG   K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
           +G   +  V N ++ MY K    E+  ++F+A++  +L+SW AL+SG+  S   G+    
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F + L  G   +     +V+  CS   + E G Q+H   IK+    D  +GTALVD+YAK
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
              L+ A +  D    +    +  I+SG+ +   D  E  +  F Q +  G++P+  T +
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQ--TDQAEKAVKYFRQMQREGIKPNEYTLA 358

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
             LS  +  A L  GR LHA ++K G+  D+ VG+AL+ +Y KCG ++ A  IFKG+  R
Sbjct: 359 SCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISR 418

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           DIVSWN ++S Y+ HG G+ AL  F  M  EG  PD+ + +GVL AC + GL E G   F
Sbjct: 419 DIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRF 478

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
           + + +IYG+ P +EH+ACMVD+LGRAG+ +E    I     +   L+W T++   KL  N
Sbjct: 479 DSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGN 538

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
             F   A+K+L ++EP    S+IL+SN++A +G  D+   +R  M    + KE GCSW+E
Sbjct: 539 VDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVE 598

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           +D ++H F++    HP+  EIY+KLD L   +
Sbjct: 599 VDGQVHVFLSQDGSHPKIREIYAKLDKLGQSL 630



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 230/486 (47%), Gaps = 10/486 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    +G L+ G+ +HA  L+SG + D F   +L+++Y+K   +  A K+F  +    
Sbjct: 57  VLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPD 116

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W+++I G    G  +    +   M R   + N+ T S ++   + + D  +G+ IH 
Sbjct: 117 VVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHG 176

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
              K GFE++  V   LI MY  S C  +   VF  +   D+   N ++  +  +     
Sbjct: 177 CICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR 236

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +F  +L   F+PN +TF +V+  C   L  E GKQ+H   +K     +  VG A+V 
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVD 296

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K    E+A   FD +  R++ SWT +ISGY ++    KA+  F +    GI  +   
Sbjct: 297 MYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYT 356

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           LA+ + GCS  + LE G QLH  A+K G+  D+ +G+ALVD+Y K G ++ A  +  G  
Sbjct: 357 LASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLI 416

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +N I+SG+ +      E  +  F      G+ PD  TF  +LS  +    +  G
Sbjct: 417 SRDIVSWNTIISGYSQH--GQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEG 474

Query: 484 RS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS----WNAMLS 538
           +    + S   G    +     ++ +  + G  +   +IF  I + ++      W  +L 
Sbjct: 475 KKRFDSMSKIYGINPSIEHYACMVDILGRAGKFN-EVKIF--IEEMNLTPYSLIWETVLG 531

Query: 539 AYALHG 544
           A  LHG
Sbjct: 532 ACKLHG 537


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/678 (33%), Positives = 377/678 (55%), Gaps = 2/678 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G  D  LG  VH   ++ G  +D      L+++Y+   +LD A  +F  M  R+
Sbjct: 176 VLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERN 235

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           ++ W+++I GY+ +  +   L +   M       ++ T +    +C+ L     G Q+HA
Sbjct: 236 SVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHA 295

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           +A+K+ F  +  VGT+ + MY       +A  VF        +  N +I+ Y +  +   
Sbjct: 296 YALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLE 355

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  L  S  + ++ + +  ++ C    G  EG QLHGLAVK G+   I V N I+ 
Sbjct: 356 ALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILD 415

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G   EA  +FD +  ++ +SW A+I+ + ++ H  + +  F+  L   +  D   
Sbjct: 416 MYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYT 475

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
             +V+  C+    L  G+++HG  IK G   D  +G+A++D+Y K G L  A  + +   
Sbjct: 476 FGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE 535

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            + T  +N+I+SGF  +     E+ +  FS+    G+ PD  T++ +L + A+ A +  G
Sbjct: 536 ERTTVSWNSIISGFSSE--KQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELG 593

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +H   +K    +DV + + ++ MY+KCG++  +  +F+    RD V+W+AM+ AYA H
Sbjct: 594 KQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYH 653

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           GLG+ A+ LFEEM+ +   P+    + VL+AC + G  + G+  F E+   YGL P +EH
Sbjct: 654 GLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEH 713

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           ++CMVDLLGR+G+++EA+ LI S PF    ++WRTL+ + +L  N + +  A+  LL L+
Sbjct: 714 YSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLD 773

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P+D+ +++L+SN+YA  GM  E AK+R+ M + +L KE GCSWI++  ++H F+   K H
Sbjct: 774 PQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAH 833

Query: 724 PESEEIYSKLDLLNDEMK 741
           P SEEIY +  LL DEMK
Sbjct: 834 PRSEEIYQQTHLLVDEMK 851



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/598 (26%), Positives = 273/598 (45%), Gaps = 7/598 (1%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           Q D    N +I  YA    ++ AQ LFD M  R  ++W S++  YL +G +   + I   
Sbjct: 101 QRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTK 160

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M   E + +  T +V+L+AC+ +ED   G Q+H  AI+ GF+++V  GT+L+ MY     
Sbjct: 161 MRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKK 220

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
              A N+F  +  ++  C + +I  Y +         ++  +L      +  TF +    
Sbjct: 221 LDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRS 280

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C      E G QLH  A+K     +  VG A + MY K     +A ++F+        S 
Sbjct: 281 CAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSH 340

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            ALI GY R     +A+  F       +  D   L+  +  CS       G+QLHG A+K
Sbjct: 341 NALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVK 400

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            G   ++ +   ++D+YAK G L  A ++ D    K    +NAI++   +   +  E+ +
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQN--EHVEETL 458

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
            LF     + MEPD  TF  ++   A +  L  G  +H   IK+G   D  VG+A+I MY
Sbjct: 459 ALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMY 518

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
            KCG +  A +I + + +R  VSWN+++S ++    G+ AL  F  M + G  PD+ +  
Sbjct: 519 CKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYA 578

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
            VL  C      E G  +  +I ++  L   +   + +VD+  + G + ++  +   +P 
Sbjct: 579 TVLDICANLATVELGKQIHGQILKL-QLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP- 636

Query: 630 SESPLLWRTLVSVSKL--MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDE 685
               + W  ++       +      +    +L +++P     FI V    A  G +D+
Sbjct: 637 KRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHT-IFISVLRACAHMGFVDK 693



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 210/449 (46%), Gaps = 39/449 (8%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S I + CS L+    G+Q HA    +GF   VFV   L+  Y        A NVF  +
Sbjct: 40  TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99

Query: 221 AYKDVRCVNFMILEYNKAGESEMA--------------------------FH-----VFV 249
             +DV   N MI  Y   G  E A                          FH     +F 
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNAIVTMYG 306
            +   + + +  TF  V+  C    G+E+   G Q+H LA++ G   ++  G A+V MY 
Sbjct: 160 KMRLLEIQHDYATFAVVLKAC---TGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYS 216

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
                + A  +F  + ERN + W+A+I+GYVR+    + +  +   LD G+    +  A+
Sbjct: 217 TCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFAS 276

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
               C+  S  ELG QLH +A+K  +  D  +GTA +D+YAK   +  AR + + F    
Sbjct: 277 AFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPT 336

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
               NA++ G+  +  D   + + +F   + + ++ D ++ S  L+  ++    + G  L
Sbjct: 337 RQSHNALIVGYARQ--DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQL 394

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H  ++K G   ++ V N ++ MYAKCG++  A  IF  +  +D VSWNA+++A+  +   
Sbjct: 395 HGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHV 454

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQAC 575
           +  L LF  M R    PDD +   V++AC
Sbjct: 455 EETLALFVSMLRSTMEPDDYTFGSVVKAC 483



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 225/523 (43%), Gaps = 54/523 (10%)

Query: 249 VHLLSSD-FEPND-YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +H +SS+   P    TF+++   C     +  GKQ H      G V  + V N ++  Y 
Sbjct: 25  IHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYC 84

Query: 307 KHGMSEEAERMFDAISERNLISWTALISG------------------------------- 335
           K      A  +FD + +R++ISW  +I G                               
Sbjct: 85  KCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSC 144

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           Y+++G   K+I  F +   L I  D +  A V+  C+   +  LGLQ+H  AI+ G+ SD
Sbjct: 145 YLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSD 204

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           V  GTALVD+Y+    L  A  +      + +  ++A+++G++    D   + + L+   
Sbjct: 205 VVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRN--DRFTEGLKLYKVM 262

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
              GM     TF+      A  +    G  LHAY++KT +  D IVG A + MYAKC  +
Sbjct: 263 LDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRM 322

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             A ++F    +    S NA++  YA       AL +F  +++     D+IS+ G L AC
Sbjct: 323 VDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTAC 382

Query: 576 IYSGLSEGGICLFNEIEQIYGL--RPILEHFAC----MVDLLGRAGRLSEAMNLINSSPF 629
                    I  + E  Q++GL  +  L+   C    ++D+  + G L EA  + +    
Sbjct: 383 -------SAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI 435

Query: 630 SESPLLWRTLVSVSKL--MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
            ++ + W  +++  +         ++  S     +EP D  +F  V    AG+  L+   
Sbjct: 436 KDA-VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDY-TFGSVVKACAGKKALNYGM 493

Query: 688 KV--RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +V  R   + + L    G + I++  K    V + K H   EE
Sbjct: 494 EVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEE 536


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/700 (34%), Positives = 370/700 (52%), Gaps = 20/700 (2%)

Query: 49  VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           V C+E  L     P ++K +    D++ G  VHA  + +   +D F AN L+ +Y  F  
Sbjct: 99  VPCNEFAL-----PVVLKCA---PDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGM 150

Query: 109 LDVAQKLFDGML----VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           +D A+++FD  +     R+A++W ++I  Y+ +      +G+  +M  S E+ NE   S 
Sbjct: 151 VDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSC 210

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           ++ AC+   D   G Q+H   +++G+E +VF   +L+ MY   G    A  VF  +   D
Sbjct: 211 VVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD 270

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V   N  I      G    A  + + + SS   PN +T ++V+  C        G+Q+HG
Sbjct: 271 VVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG 330

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             VK     +  V   +V MY KHG  ++A ++FD +  R+LI W ALISG    G  G+
Sbjct: 331 FMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGE 390

Query: 345 AINGF----LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
            ++ F     E LDL +  + + LA+V+   +    +    Q+H  A K G LSD  +  
Sbjct: 391 VLSLFHRMRKEGLDLDV--NRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVIN 448

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
            L+D Y K G L  A  +              +++   +   D  ED + LF Q    G+
Sbjct: 449 GLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQ--CDHGEDAIKLFVQMLRKGL 506

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           EPD    S LL+   S +   +G+ +HA+ IK  + +DV  GNAL+  YAKCGSI+ A  
Sbjct: 507 EPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADM 566

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
            F G+ +R IVSW+AM+   A HG GK AL LF  M  EG AP+ I++  VL AC ++GL
Sbjct: 567 AFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGL 626

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            +     F  +++ +G+    EH+ACM+D+LGRAG+L +AM L+N+ PF  +  +W  L+
Sbjct: 627 VDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALL 686

Query: 641 SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
             S++  + +   +A+++L  LEP+ +G+ +L++N YA  GM DE AKVR  M D  + K
Sbjct: 687 GASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKK 746

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           E   SW+EI  K+H F+   K HP + +IY KL  L D M
Sbjct: 747 EPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLM 786



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 256/514 (49%), Gaps = 13/514 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +H+ LLKSG       +N+L+ LY++      A+ +FD +     ++W+SL+  Y +
Sbjct: 23  GAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G     L     M       NE    V+L+ C+   D  FG Q+HA A+ +   ++VFV
Sbjct: 81  NGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CA--PDVRFGAQVHALAVATRLVHDVFV 137

Query: 197 GTSLISMYFHSGCFREAENVFRGL----AYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
             +L+++Y   G   EA  +F         ++    N MI  Y K  +S  A  VF  ++
Sbjct: 138 ANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMV 197

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S   PN++ F+ V++ C  +  +E G+Q+HG  V+ G  +++   NA+V MY K G  E
Sbjct: 198 WSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIE 257

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +F+ +   +++SW A ISG V  GH  +A+   L+    G+  +   L++V+  C+
Sbjct: 258 MAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACA 317

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
                 LG Q+HGF +K     D  +   LVD+YAK G L  AR + D    +    +NA
Sbjct: 318 GAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNA 377

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPD--PVTFSRLLSLSASQACLVRGRSLHAYS 490
           ++SG        E  V+ LF + R  G++ D    T + +L  +AS   +   R +HA +
Sbjct: 378 LISGCSHDGRHGE--VLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALA 435

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
            K G  +D  V N LI  Y KCG +D A ++FK     DI+S   M++A +    G+ A+
Sbjct: 436 EKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAI 495

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
            LF +M R+G  PD   +  +L AC      E G
Sbjct: 496 KLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 175/373 (46%), Gaps = 25/373 (6%)

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G  LH   +K G++   S  N ++T+Y +  +   A  +FD I +   +SW++L++ Y  
Sbjct: 23  GAHLHSHLLKSGLLAGFS--NHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G    A+  F      G+ C+   L  V+       ++  G Q+H  A+    + DV +
Sbjct: 81  NGMPRDALLAFRAMRGRGVPCNEFALPVVL---KCAPDVRFGAQVHALAVATRLVHDVFV 137

Query: 399 GTALVDIYAKGGDLKSARMLLDGF----SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
             ALV +Y   G +  AR + D +      +    +N ++S +++   D   D + +F +
Sbjct: 138 ANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKN--DQSGDAIGVFRE 195

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
              +G  P+   FS +++       L  GR +H   ++TGY  DV   NAL+ MY+K G 
Sbjct: 196 MVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGD 255

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           I+ A  +F+ +   D+VSWNA +S    HG    AL L  +MK  G  P+  ++  VL+A
Sbjct: 256 IEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKA 315

Query: 575 CIYSGLSEGGICLFNEIEQIYGLR----PILEHFAC--MVDLLGRAGRLSEAMNLINSSP 628
           C  +G        FN   QI+G         + F    +VD+  + G L +A  + +  P
Sbjct: 316 CAGAG-------AFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP 368

Query: 629 FSESPLLWRTLVS 641
                +LW  L+S
Sbjct: 369 -RRDLILWNALIS 380



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%)

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           P T    L+   +   L  G  LH++ +K+G  A     N L+T+Y++C     A  +F 
Sbjct: 4   PETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFD 61

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            I D   VSW+++++AY+ +G+ + ALL F  M+  G   ++ ++  VL+
Sbjct: 62  EIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK 111


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/669 (33%), Positives = 362/669 (54%), Gaps = 2/669 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG+ V   +++SG Q + +E N LI L++    +  A++ FD +  ++ +TW ++I 
Sbjct: 76  DAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIA 135

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY   G  +    +   M     + +  T  ++L+ACS       G++ HA  IK GF +
Sbjct: 136 GYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVS 195

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  +GT+L+SMY   G    A  VF GL  +DV   N MI  Y K+G+ E AF +F  + 
Sbjct: 196 DFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQ 255

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              F+PN  +F +++  C     +  GK +H   +  G+V ++ V  A++ MY   G  E
Sbjct: 256 QEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIE 315

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A R+FD +  R+++SWT +I GY  + +   A   F    + GI  D      +I+ C+
Sbjct: 316 GARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACA 375

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             ++L L  ++H   ++ G+ +D+ + TALV +YAK G +K AR + D  S +    ++A
Sbjct: 376 SSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSA 435

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++  ++E    +E      F   +   +EPD VT+  LL+       L  G  ++  +IK
Sbjct: 436 MIGAYVENGCGEE--AFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIK 493

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
               + + VGNALI M  K GSI+ A  IF+ +  RD+V+WN M+  Y+LHG  + AL L
Sbjct: 494 ADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDL 553

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+ M +E F P+ ++ +GVL AC  +G  E G   F+ +    G+ P +E + CMVDLLG
Sbjct: 554 FDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLG 613

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG L EA  LIN  P   +  +W TL++  ++  N   +  A++R L  EP D   ++ 
Sbjct: 614 RAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQ 673

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +S+MYA  GM +  AKVR  M    + KE GC+WIE++ KLH FV   + HP++ EIY++
Sbjct: 674 LSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAE 733

Query: 733 LDLLNDEMK 741
           L  L   +K
Sbjct: 734 LARLMTAIK 742



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 226/426 (53%), Gaps = 2/426 (0%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           + + C +L D   G+Q+    I+SG + N++   +LI ++   G   EA   F  +  K 
Sbjct: 67  LFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKT 126

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V   N +I  Y + G  + AF +F  ++    EP+  TF  V+  C    G++ GK+ H 
Sbjct: 127 VVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHA 186

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             +K G V +  +G A+V+MY K G  + A ++FD + +R++ ++  +I GY +SG G K
Sbjct: 187 QVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEK 246

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A   F      G   +     +++DGCS    L  G  +H   +  G + DVR+ TAL+ 
Sbjct: 247 AFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIR 306

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y   G ++ AR + D    +    +  ++ G+ E    + ED   LF+  +  G++PD 
Sbjct: 307 MYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAEN--SNIEDAFGLFATMQEEGIQPDR 364

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           +T+  +++  AS A L   R +H+  ++ G+  D++V  AL+ MYAKCG+I  A Q+F  
Sbjct: 365 ITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDA 424

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           +S RD+VSW+AM+ AY  +G G+ A   F  MKR    PD ++ + +L AC + G  + G
Sbjct: 425 MSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLG 484

Query: 585 ICLFNE 590
           + ++ +
Sbjct: 485 MEIYTQ 490



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%), Gaps = 2/274 (0%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
            ++     S DL L + +H+ ++++G   D      L+++YAK   +  A+++FD M  R
Sbjct: 369 HIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRR 428

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
             ++W+++I  Y+++G  E        M R+  + +  T   +L AC  L     G +I+
Sbjct: 429 DVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIY 488

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             AIK+   +++ VG +LI+M    G    A  +F  +  +DV   N MI  Y+  G + 
Sbjct: 489 TQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAR 548

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVGNAI 301
            A  +F  +L   F PN  TF  V+S C     VEEG++    L    G+V  + +   +
Sbjct: 549 EALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCM 608

Query: 302 VTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
           V + G+ G  +EAE + + +  + N   W+ L++
Sbjct: 609 VDLLGRAGELDEAELLINRMPLKPNSSIWSTLLA 642


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/667 (32%), Positives = 375/667 (56%), Gaps = 2/667 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L LG+ +HA   K G   D F  + L++LYAK   +++A K+F GM  ++ +TW  L+ G
Sbjct: 229 LDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNG 288

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   GD   VL + C M   + K NE T + +L+ C+  ++   G+ IH+  IK G+E N
Sbjct: 289 YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN 348

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            F+G  L+ MY   G   +A  VF+ +   D+   + +I   ++ G+SE +  +F  +  
Sbjct: 349 EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRL 408

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            D  PN YT  +++S       ++ G+ +H    K+G   +++V NA+VTMY K+G   +
Sbjct: 409 GDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHD 468

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
             ++++++ +R+LISW A +SG    G   + +  F   L+ G   +     +++  CS 
Sbjct: 469 GTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             ++  G Q+H   IK+    +  + TAL+D+YAK   L+ A +  +  S +    +  I
Sbjct: 529 LFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVI 588

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++ + +   +  E  +  F Q +  G++P+  T +  LS  +S A L  G+ LH+   K+
Sbjct: 589 ITNYAQ--TNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS 646

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+ +D+ VG+AL+ MYAKCG ++ A  +F+ +  RD ++WN ++  YA +G G  AL  F
Sbjct: 647 GHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAF 706

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
             M  EG +PD ++  G+L AC + GL E G   FN + + +G+ P ++H ACMVD+LGR
Sbjct: 707 RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGR 766

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
            G+  E  + I     S++ L+W T++  SK+  N      A+ +L +L+P++  S+IL+
Sbjct: 767 VGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILL 826

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN++A +G  D+  +VR+ M+   + KE GCSW+E + ++H FV+    HP+ +EI+ KL
Sbjct: 827 SNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKL 886

Query: 734 DLLNDEM 740
           D L+ E+
Sbjct: 887 DELDREL 893



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 164/628 (26%), Positives = 303/628 (48%), Gaps = 19/628 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L + +A+H  ++K     D+    +L+N+YAK      A+ +   M  R  ++WT+LI+G
Sbjct: 128 LGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQG 187

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            + +G     + +  +M       NE T +  L+ACSL      G+Q+HA A K G   +
Sbjct: 188 LVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLD 247

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FVG++L+ +Y   G    A  +F G+  ++    N ++  Y + G+      +F  ++ 
Sbjct: 248 LFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMME 307

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            D + N++T T V+  C  +  +++G+ +H L +K G      +G  +V MY K G++ +
Sbjct: 308 LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAID 367

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-ICCDSSCLATVIDGCS 372
           A  +F  I + +++ W+ALI+   + G   ++I  F   + LG    +   + +++   +
Sbjct: 368 AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF-HLMRLGDTLPNQYTICSLLSAAT 426

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              NL+ G  +H    K+G+ +DV +  ALV +Y K G +     L +    +    +NA
Sbjct: 427 NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNA 486

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV---RGRSLHAY 489
            LSG  +    D    + +F      G  P+  TF   +S+  S +CL     GR +HA+
Sbjct: 487 YLSGLHDCGMYDRP--LTIFYHMLEEGFIPNMYTF---ISILGSCSCLFDVHYGRQVHAH 541

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            IK     +  V  ALI MYAKC  ++ A   F  +S RD+ +W  +++ YA    G+ A
Sbjct: 542 IIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKA 601

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF--ACM 607
           L  F +M++EG  P++ ++ G L  C      EGG  L +    ++    + + F  + +
Sbjct: 602 LNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS---MVFKSGHVSDMFVGSAL 658

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD--LEPK 665
           VD+  + G + EA  L   +      + W T++           ++ A + +LD  + P 
Sbjct: 659 VDMYAKCGCMEEAEALF-EALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISP- 716

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           D  +F  + +  + QG+++E  +   +M
Sbjct: 717 DGVTFTGILSACSHQGLVEEGKEHFNSM 744



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 250/518 (48%), Gaps = 15/518 (2%)

Query: 49  VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           V C+E TL       ++K    S +LK GQ +H+ ++K G + + F    L+++Y+K   
Sbjct: 310 VKCNEFTL-----TTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGL 364

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
              A  +F  +     + W++LI      G  E  + +   M   +   N++T   +L A
Sbjct: 365 AIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSA 424

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
            +   +  +G+ IHA   K GFE +V V  +L++MY  +GC  +   ++  +  +D+   
Sbjct: 425 ATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISW 484

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N  +   +  G  +    +F H+L   F PN YTF +++  C     V  G+Q+H   +K
Sbjct: 485 NAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIK 544

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
             +     V  A++ MY K    E+A+  F+ +S R+L +WT +I+ Y ++  G KA+N 
Sbjct: 545 NQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F +    G+  +   LA  + GCS  ++LE G QLH    K G++SD+ +G+ALVD+YAK
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G ++ A  L +    + T  +N I+ G+ +    ++   +  F      G+ PD VTF+
Sbjct: 665 CGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNK--ALTAFRMMLDEGISPDGVTFT 722

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS 526
            +LS  + Q  +  G+  H  S+   +     V +   ++ +  + G  D      + + 
Sbjct: 723 GILSACSHQGLVEEGKE-HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQ 781

Query: 527 -DRDIVSWNAMLSAYALHG---LG-KGALLLFEEMKRE 559
             ++ + W  +L A  +H    LG K A  LFE    E
Sbjct: 782 LSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 202/413 (48%), Gaps = 2/413 (0%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           S +L  C+        + IH   +K     +  +  SL+++Y        A  V   +  
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +DV     +I      G +  + ++F  + +    PN++T    +  C   + ++ GKQ+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H  A K G++ ++ VG+A+V +Y K G  E A +MF  + E+N ++W  L++GY + G  
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
              +  F   ++L + C+   L TV+ GC+   NL+ G  +H   IK GY  +  +G  L
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y+K G    A  +           ++A+++   ++     E+ + LF   RL    P
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQ--GQSEESIKLFHLMRLGDTLP 413

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           +  T   LLS + +   L  G+S+HA   K G+  DV V NAL+TMY K G +    +++
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           + + DRD++SWNA LS     G+    L +F  M  EGF P+  + + +L +C
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSC 526



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 165/317 (52%), Gaps = 2/317 (0%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +++++  C     +   K +HGL VK  +  +  +  ++V +Y K   S  A  +   + 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           +R+++SWTALI G V  G    +I  F E  + GI  +   LAT +  CS+C  L+LG Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H  A K G L D+ +G+ALVD+YAK G+++ A  +  G   +    +N +L+G+ ++  
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR-- 292

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
            D   V+ LF       ++ +  T + +L   A+   L +G+ +H+  IK GY  +  +G
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
             L+ MY+KCG    A  +FK I   DIV W+A+++     G  + ++ LF  M+     
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412

Query: 563 PDDISILGVLQACIYSG 579
           P+  +I  +L A   +G
Sbjct: 413 PNQYTICSLLSAATNTG 429


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/669 (33%), Positives = 371/669 (55%), Gaps = 11/669 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  + + +L +G   D F    LIN++ K   +D A K+F+ +  R  ITWTS+I G   
Sbjct: 224 GGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLAR 283

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFEN 192
              ++     AC++++  E+       V    +L+AC+  E    G+++HA   + G + 
Sbjct: 284 HRQFKQ----ACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDT 339

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            ++VGT+L+SMY   G   +A  VF  +  ++V     MI  + + G  E AF  F  ++
Sbjct: 340 EIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMI 399

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S  EPN  TF +++  C     +++G+Q+H   +K G + +  V  A+++MY K G   
Sbjct: 400 ESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLM 459

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A  +F+ IS++N+++W A+I+ YV+      A+  F   L  GI  DSS   ++++ C 
Sbjct: 460 DARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCK 519

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               LELG  +    I+ G+ SD+ +  ALV ++   GDL SA  L +    +    +N 
Sbjct: 520 SPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNT 579

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I++GF++    + +     F   + +G++PD +TF+ LL+  AS   L  GR LHA   +
Sbjct: 580 IIAGFVQH--GENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITE 637

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                DV+VG  LI+MY KCGSID A  +F  +  +++ SW +M++ YA HG GK AL L
Sbjct: 638 AALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALEL 697

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F +M++EG  PD I+ +G L AC ++GL + G+  F  ++  + + P +EH+ CMVDL G
Sbjct: 698 FCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFG 756

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG L EA+  IN         LW  L+   ++  + + +   +++ L+L+P D G +++
Sbjct: 757 RAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVI 816

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+YA  GM  E  K+R  M D  + K+ G SWIE+D ++H F +  K HP+ EEI+++
Sbjct: 817 LSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAE 876

Query: 733 LDLLNDEMK 741
           L  L+ EMK
Sbjct: 877 LGRLHMEMK 885



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 285/524 (54%), Gaps = 3/524 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  L+++ I   +L  G+ +H  +  S  Q D F  N LI++YAK    + A+++FD M 
Sbjct: 107 YSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMP 166

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +   +W  L+ GY+    YE    +   M +   K +++T   +L AC+  ++   G +
Sbjct: 167 DKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGE 226

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           + +  + +G++ ++FVGT+LI+M+   G   +A  VF  L  +D+     MI    +  +
Sbjct: 227 LFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQ 286

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + A ++F  +     +P+   F +++  C     +E+GK++H    + G+  EI VG A
Sbjct: 287 FKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTA 346

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +++MY K G  E+A  +F+ +  RN++SWTA+I+G+ + G   +A   F + ++ GI  +
Sbjct: 347 LLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPN 406

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
                +++  CS  S L+ G Q+H   IK GY++D R+ TAL+ +YAK G L  AR + +
Sbjct: 407 RVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFE 466

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             S +    +NA+++ +++   +  ++ +  F      G++PD  TF+ +L++  S   L
Sbjct: 467 RISKQNVVAWNAMITAYVQH--EKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDAL 524

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ + +  I+ G+ +D+ + NAL++M+  CG +  A  +F  + +RD+VSWN +++ +
Sbjct: 525 ELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGF 584

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEG 583
             HG  + A   F+ M+  G  PD I+  G+L AC     L+EG
Sbjct: 585 VQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 250/487 (51%), Gaps = 6/487 (1%)

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + +  T S +L+ C   ++   GE+IH     S  + ++F+   LISMY   G    A+ 
Sbjct: 101 QIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQ 160

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F  +  KDV   N ++  Y +    E AF +   ++    +P+ YTF  +++ C +   
Sbjct: 161 IFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKN 220

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           V++G +L  L +  G   ++ VG A++ M+ K G  ++A ++F+ +  R+LI+WT++I+G
Sbjct: 221 VDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITG 280

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
             R     +A N F    + G+  D     +++  C+    LE G ++H    + G  ++
Sbjct: 281 LARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTE 340

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           + +GTAL+ +Y K G ++ A  + +    +    + A+++GF +      E+  + F++ 
Sbjct: 341 IYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQH--GRMEEAFLFFNKM 398

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
             +G+EP+ VTF  +L   +  + L +GR +H   IK GY  D  V  AL++MYAKCGS+
Sbjct: 399 IESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSL 458

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             A  +F+ IS +++V+WNAM++AY  H     A+  F+ + +EG  PD  +   +L  C
Sbjct: 459 MDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVC 518

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
                 E G  + + I +  G    L     +V +    G L  AMNL N  P  E  L+
Sbjct: 519 KSPDALELGKWVQSLIIRA-GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP--ERDLV 575

Query: 636 -WRTLVS 641
            W T+++
Sbjct: 576 SWNTIIA 582



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 228/473 (48%), Gaps = 7/473 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VHA + + G   + +    L+++Y K   ++ A ++F+ +  R+ ++WT++I G
Sbjct: 322 LEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAG 381

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +   G  E        M  S  + N  T   IL ACS       G QIH   IK+G+  +
Sbjct: 382 FAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITD 441

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             V T+L+SMY   G   +A NVF  ++ ++V   N MI  Y +  + + A   F  LL 
Sbjct: 442 DRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLK 501

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +P+  TFT++++VC     +E GK +  L ++ G   ++ + NA+V+M+   G    
Sbjct: 502 EGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMS 561

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F+ + ER+L+SW  +I+G+V+ G    A + F    + G+  D      +++ C+ 
Sbjct: 562 AMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACAS 621

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L  G +LH    +     DV +GT L+ +Y K G +  A ++      K    + ++
Sbjct: 622 PEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSM 681

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++G+ +     E   + LF Q +  G++PD +TF   LS  A    +  G  LH +    
Sbjct: 682 ITGYAQHGRGKE--ALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEG--LHHFESMK 737

Query: 494 GYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
            +  +  + +   ++ ++ + G +  A +    +  + D   W A+L A  +H
Sbjct: 738 DFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVH 790



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 192/363 (52%), Gaps = 5/363 (1%)

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           K+ +  N  +   +KAG+   A  V + + S   + +  T+++++ +C ++  + +G+++
Sbjct: 67  KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126

Query: 283 HGLAVKFGVVR-EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           H   +KF  ++ +I + N +++MY K G +  A+++FD + ++++ SW  L+ GYV+   
Sbjct: 127 HN-HIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRR 185

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             +A     + +  G+  D      +++ C+   N++ G +L    +  G+ +D+ +GTA
Sbjct: 186 YEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTA 245

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L++++ K G +  A  + +    +    + ++++G         +    LF      G++
Sbjct: 246 LINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH--RQFKQACNLFQVMEEEGVQ 303

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           PD V F  LL        L +G+ +HA   + G   ++ VG AL++MY KCGS++ A ++
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEV 363

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGL 580
           F  +  R++VSW AM++ +A HG  + A L F +M   G  P+ ++ + +L AC   S L
Sbjct: 364 FNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSAL 423

Query: 581 SEG 583
            +G
Sbjct: 424 KQG 426


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/694 (32%), Positives = 374/694 (53%), Gaps = 11/694 (1%)

Query: 48  SVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN 107
           SV C+E  L     P ++K +  +G    G  +HA  + +G   D F AN L+ +Y  F 
Sbjct: 98  SVRCNEFVL-----PVVLKCAPDAG---FGTQLHALAMATGLGGDIFVANALVAMYGGFG 149

Query: 108 RLDVAQKLFD-GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL 166
            +D A+ +FD     R+ ++W  L+  Y+ +      + +  +M     + NE   S ++
Sbjct: 150 FVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVV 209

Query: 167 EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR 226
            AC+   D   G ++HA  I++G++ +VF   +L+ MY   G  R A  VF  +   DV 
Sbjct: 210 NACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVV 269

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
             N  I      G  + A  + + + SS   PN +T ++++  C  +     G+Q+HG  
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFM 329

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI 346
           VK     +  +   +V MY KHG+ ++A+++FD I +R+L+ W ALISG        +A+
Sbjct: 330 VKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEAL 389

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
           + F      G   + + LA V+   +    +    Q+H  A K G+LSD  +   L+D Y
Sbjct: 390 SLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSY 449

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
            K   L  A  + +         F ++++   +   D  ED + LF +    G++PDP  
Sbjct: 450 WKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQ--CDHGEDAIKLFMEMLRKGLDPDPFV 507

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
            S LL+  AS +   +G+ +HA+ IK  + +DV  GNAL+  YAKCGSI+ A   F G+ 
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLP 567

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           ++ +VSW+AM+   A HG GK AL +F  M  E  +P+ I++  VL AC ++GL +    
Sbjct: 568 EKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKR 627

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
            FN +++++G+    EH+ACM+DLLGRAG+L +AM L+NS PF  +  +W  L++ S++ 
Sbjct: 628 YFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH 687

Query: 647 ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
            + +   LA+++L  LEP+ +G+ +L++N YA  GM D+ AKVR  M D ++ KE   SW
Sbjct: 688 RDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSW 747

Query: 707 IEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           +E+  K+H F+   K HP + +IY+KLD L D M
Sbjct: 748 VELKDKVHTFIVGDKSHPRARDIYAKLDELGDLM 781



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 254/502 (50%), Gaps = 12/502 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEA--NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           G  +HA LLKSG     F    N+L++ Y+K      A+++FD +     ++W+SL+  Y
Sbjct: 23  GAHIHAHLLKSG----LFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAY 78

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
            ++      LG    M     + NE    V+L+ C+   D  FG Q+HA A+ +G   ++
Sbjct: 79  SNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CA--PDAGFGTQLHALAMATGLGGDI 135

Query: 195 FVGTSLISMYFHSGCFREAENVF-RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           FV  +L++MY   G   EA  VF      ++    N ++  Y K      A  VF  ++ 
Sbjct: 136 FVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVW 195

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +PN++ F+ V++ C  +  +E G+++H + ++ G  +++   NA+V MY K G    
Sbjct: 196 GGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRM 255

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F  + E +++SW A ISG V  GH   A+   L+    G+  +   L++++  C+ 
Sbjct: 256 AAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
                LG Q+HGF +K    SD  +   LVD+YAK G L  A+ + D    +    +NA+
Sbjct: 316 SGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNAL 375

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SG        E   + LF + R  G + +  T + +L  +AS   +   R +HA + K 
Sbjct: 376 ISGCSHGAQHAE--ALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKL 433

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+ +D  V N LI  Y KC  ++ A+++F+     DI+++ +M++A +    G+ A+ LF
Sbjct: 434 GFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLF 493

Query: 554 EEMKREGFAPDDISILGVLQAC 575
            EM R+G  PD   +  +L AC
Sbjct: 494 MEMLRKGLDPDPFVLSSLLNAC 515



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 177/374 (47%), Gaps = 28/374 (7%)

Query: 278 EGKQLHGLAVK---FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
           +G  +H   +K   F V R     N +++ Y K  +   A R+FD I +   +SW++L++
Sbjct: 22  QGAHIHAHLLKSGLFAVFR-----NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVT 76

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
            Y  +     A+  F       + C+   L  V+       +   G QLH  A+  G   
Sbjct: 77  AYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVL---KCAPDAGFGTQLHALAMATGLGG 133

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           D+ +  ALV +Y   G +  ARM+ D   C + T  +N ++S +++   D     + +F 
Sbjct: 134 DIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN--DRCSHAVKVFG 191

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           +    G++P+   FS +++       L  GR +HA  I+TGY  DV   NAL+ MY+K G
Sbjct: 192 EMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLG 251

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            I  A  +F  + + D+VSWNA +S   LHG  + AL L  +MK  G  P+  ++  +L+
Sbjct: 252 DIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILK 311

Query: 574 ACIYSGLSEGGICLFNEIEQIYGL----RPILEHFAC--MVDLLGRAGRLSEAMNLINSS 627
           AC  SG        FN   QI+G         +++    +VD+  + G L +A  + +  
Sbjct: 312 ACAGSG-------AFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWI 364

Query: 628 PFSESPLLWRTLVS 641
           P     +LW  L+S
Sbjct: 365 P-QRDLVLWNALIS 377



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T   LL+  A+   L++G  +HA+ +K+G  A  +  N L++ Y+KC     A ++F  I
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEI 63

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
            D   VSW+++++AY+ + + + AL  F  M+
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMR 95


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/667 (32%), Positives = 375/667 (56%), Gaps = 2/667 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L LG+ +HA   K G   D F  + L++LYAK   +++A K+F GM  ++ +TW  L+ G
Sbjct: 229 LDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNG 288

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   GD   VL + C M   + K NE T + +L+ C+  ++   G+ IH+  IK G+E N
Sbjct: 289 YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN 348

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            F+G  L+ MY   G   +A  VF+ +   D+   + +I   ++ G+SE +  +F  +  
Sbjct: 349 EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRL 408

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            D  PN YT  +++S       ++ G+ +H    K+G   +++V NA+VTMY K+G   +
Sbjct: 409 GDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHD 468

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
             ++++++ +R+LISW A +SG    G   + +  F   L+ G   +     +++  CS 
Sbjct: 469 GTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             ++  G Q+H   IK+    +  + TAL+D+YAK   L+ A +  +  S +    +  I
Sbjct: 529 LFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVI 588

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++ + +   +  E  +  F Q +  G++P+  T +  LS  +S A L  G+ LH+   K+
Sbjct: 589 ITNYAQ--TNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS 646

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+ +D+ VG+AL+ MYAKCG ++ A  +F+ +  RD ++WN ++  YA +G G  AL  F
Sbjct: 647 GHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAF 706

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
             M  EG +PD ++  G+L AC + GL E G   FN + + +G+ P ++H ACMVD+LGR
Sbjct: 707 RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGR 766

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
            G+  E  + I     S++ L+W T++  SK+  N      A+ +L +L+P++  S+IL+
Sbjct: 767 VGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILL 826

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN++A +G  D+  +VR+ M+   + KE GCSW+E + ++H FV+    HP+ +EI+ KL
Sbjct: 827 SNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKL 886

Query: 734 DLLNDEM 740
           D L+ E+
Sbjct: 887 DELDREL 893



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 164/628 (26%), Positives = 303/628 (48%), Gaps = 19/628 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L + +A+H  ++K     D+    +L+N+YAK      A+ +   M  R  ++WT+LI+G
Sbjct: 128 LGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQG 187

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            + +G     + +  +M       NE T +  L+ACSL      G+Q+HA A K G   +
Sbjct: 188 LVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLD 247

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FVG++L+ +Y   G    A  +F G+  ++    N ++  Y + G+      +F  ++ 
Sbjct: 248 LFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMME 307

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            D + N++T T V+  C  +  +++G+ +H L +K G      +G  +V MY K G++ +
Sbjct: 308 LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAID 367

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-ICCDSSCLATVIDGCS 372
           A  +F  I + +++ W+ALI+   + G   ++I  F   + LG    +   + +++   +
Sbjct: 368 AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF-HLMRLGDTLPNQYTICSLLSAAT 426

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              NL+ G  +H    K+G+ +DV +  ALV +Y K G +     L +    +    +NA
Sbjct: 427 NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNA 486

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV---RGRSLHAY 489
            LSG  +    D    + +F      G  P+  TF   +S+  S +CL     GR +HA+
Sbjct: 487 YLSGLHDCGMYDRP--LTIFYHMLEEGFIPNMYTF---ISILGSCSCLFDVHYGRQVHAH 541

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            IK     +  V  ALI MYAKC  ++ A   F  +S RD+ +W  +++ YA    G+ A
Sbjct: 542 IIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKA 601

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF--ACM 607
           L  F +M++EG  P++ ++ G L  C      EGG  L +    ++    + + F  + +
Sbjct: 602 LNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS---MVFKSGHVSDMFVGSAL 658

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD--LEPK 665
           VD+  + G + EA  L   +      + W T++           ++ A + +LD  + P 
Sbjct: 659 VDMYAKCGCMEEAEALF-EALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISP- 716

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           D  +F  + +  + QG+++E  +   +M
Sbjct: 717 DGVTFTGILSACSHQGLVEEGKEHFNSM 744



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 250/518 (48%), Gaps = 15/518 (2%)

Query: 49  VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           V C+E TL       ++K    S +LK GQ +H+ ++K G + + F    L+++Y+K   
Sbjct: 310 VKCNEFTL-----TTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGL 364

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
              A  +F  +     + W++LI      G  E  + +   M   +   N++T   +L A
Sbjct: 365 AIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSA 424

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
            +   +  +G+ IHA   K GFE +V V  +L++MY  +GC  +   ++  +  +D+   
Sbjct: 425 ATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISW 484

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N  +   +  G  +    +F H+L   F PN YTF +++  C     V  G+Q+H   +K
Sbjct: 485 NAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIK 544

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
             +     V  A++ MY K    E+A+  F+ +S R+L +WT +I+ Y ++  G KA+N 
Sbjct: 545 NQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F +    G+  +   LA  + GCS  ++LE G QLH    K G++SD+ +G+ALVD+YAK
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G ++ A  L +    + T  +N I+ G+ +    ++   +  F      G+ PD VTF+
Sbjct: 665 CGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNK--ALTAFRMMLDEGISPDGVTFT 722

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS 526
            +LS  + Q  +  G+  H  S+   +     V +   ++ +  + G  D      + + 
Sbjct: 723 GILSACSHQGLVEEGKE-HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQ 781

Query: 527 -DRDIVSWNAMLSAYALHG---LG-KGALLLFEEMKRE 559
             ++ + W  +L A  +H    LG K A  LFE    E
Sbjct: 782 LSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 202/413 (48%), Gaps = 2/413 (0%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           S +L  C+        + IH   +K     +  +  SL+++Y        A  V   +  
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +DV     +I      G +  + ++F  + +    PN++T    +  C   + ++ GKQ+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H  A K G++ ++ VG+A+V +Y K G  E A +MF  + E+N ++W  L++GY + G  
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
              +  F   ++L + C+   L TV+ GC+   NL+ G  +H   IK GY  +  +G  L
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y+K G    A  +           ++A+++   ++     E+ + LF   RL    P
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQ--GQSEESIKLFHLMRLGDTLP 413

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           +  T   LLS + +   L  G+S+HA   K G+  DV V NAL+TMY K G +    +++
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           + + DRD++SWNA LS     G+    L +F  M  EGF P+  + + +L +C
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSC 526



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 165/317 (52%), Gaps = 2/317 (0%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +++++  C     +   K +HGL VK  +  +  +  ++V +Y K   S  A  +   + 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           +R+++SWTALI G V  G    +I  F E  + GI  +   LAT +  CS+C  L+LG Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H  A K G L D+ +G+ALVD+YAK G+++ A  +  G   +    +N +L+G+ ++  
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR-- 292

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
            D   V+ LF       ++ +  T + +L   A+   L +G+ +H+  IK GY  +  +G
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
             L+ MY+KCG    A  +FK I   DIV W+A+++     G  + ++ LF  M+     
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412

Query: 563 PDDISILGVLQACIYSG 579
           P+  +I  +L A   +G
Sbjct: 413 PNQYTICSLLSAATNTG 429


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/666 (33%), Positives = 368/666 (55%), Gaps = 2/666 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            KLG+ +H F++K G  ++TF  N L+ LY+++  L  A+++F  M  R  I++ SLI G
Sbjct: 229 FKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISG 288

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               G  +  L +   M     K +  T + +L AC+ +     G+Q+H++ IK G  ++
Sbjct: 289 LAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSD 348

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + +  SL+ +Y        A   F     ++V   N M++ Y + G    ++ +F+ +  
Sbjct: 349 LIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQI 408

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               PN YT+ +++  C     ++ G+Q+H   +K G    + V + ++ MY KHG  + 
Sbjct: 409 EGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDT 468

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +   + E +++SWTA+I+GY +     +A+  F E  + GI  D+   ++ I  C+ 
Sbjct: 469 ARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAG 528

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L  G Q+H  +   GY  D+ +G ALV +YA+ G  + A +  +    K    +NA+
Sbjct: 529 IQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNAL 588

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SGF +  +   E+ + +FSQ   AG+E +  TF   +S +A+ A + +G+ +HA  IKT
Sbjct: 589 ISGFAQ--SGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT 646

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY ++    N LIT+Y+KCGSI+ A + F  + ++++VSWNAM++ Y+ HG G  A+ LF
Sbjct: 647 GYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLF 706

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           EEMK+ G  P+ ++ +GVL AC + GL   G+  F  + + +GL P  EH+ C+VDLLGR
Sbjct: 707 EEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGR 766

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           A  L  A   I   P     ++WRTL+S   +  N +    A++ LL+LEP+D+ +++L+
Sbjct: 767 AALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLL 826

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SNMYA  G  D   + R  M D  + KE G SWIE+ + +H F    + HP +E+IY  +
Sbjct: 827 SNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYI 886

Query: 734 DLLNDE 739
           D LN+ 
Sbjct: 887 DDLNER 892



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 256/491 (52%), Gaps = 2/491 (0%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G    ++ + +HA ++  G  +     N LI+LY+K   +D+A+ +F+ + ++ +++W +
Sbjct: 124 GKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVA 183

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G   +G  +  + + C M++S      +  S +L AC+ +E    GEQ+H F +K G
Sbjct: 184 MISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG 243

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             +  FV  +L+++Y   G    AE +F  +  +D    N +I    + G S+ A  +F 
Sbjct: 244 LSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFE 303

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +     +P+  T  +++S C       +GKQLH   +K G+  ++ +  +++ +Y K  
Sbjct: 304 KMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF 363

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E A   F      N++ W  ++  Y + G+  ++   FL+    G+  +     +++ 
Sbjct: 364 DIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILR 423

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+    L+LG Q+H   IK G+  +V + + L+D+YAK G+L +AR +L     +    
Sbjct: 424 TCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS 483

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A+++G+ +   D   + + LF +    G+  D + FS  +S  A    L +G+ +HA 
Sbjct: 484 WTAMIAGYTQH--DLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQ 541

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           S  +GY+ D+ +GNAL+++YA+CG    A+  F+ I  +D +SWNA++S +A  G  + A
Sbjct: 542 SYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEA 601

Query: 550 LLLFEEMKREG 560
           L +F +M + G
Sbjct: 602 LQVFSQMNQAG 612



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 270/559 (48%), Gaps = 20/559 (3%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG L   + +HA + KSG   +    + LI++Y     +D A KLFD +   +   W  +
Sbjct: 23  SGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKV 82

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI-FGEQIHAFAIKSG 189
           I G L       VLG+   M       +E T + +L ACS  +      EQIHA  I  G
Sbjct: 83  ISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHG 142

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F ++  V   LI +Y  +G    A+ VF  L  KD      MI   ++ G  + A  +F 
Sbjct: 143 FGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFC 202

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +  S   P  Y F++V+S C +    + G+QLHG  VK+G+  E  V NA+VT+Y + G
Sbjct: 203 QMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWG 262

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC--LATV 367
               AE++F  +  R+ IS+ +LISG  + G   +A+  F E + L  C    C  +A++
Sbjct: 263 NLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLF-EKMQLD-CMKPDCVTVASL 320

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C+       G QLH + IK G  SD+ +  +L+D+Y K  D+++A         +  
Sbjct: 321 LSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENV 380

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +N +L  +  ++ +  E   + F Q ++ G+ P+  T+  +L    S   L  G  +H
Sbjct: 381 VLWNVMLVAY-GQLGNLSESYWI-FLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH 438

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
              IK+G+  +V V + LI MYAK G +D A  I + + + D+VSW AM++ Y  H L  
Sbjct: 439 TQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFA 498

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPIL 601
            AL LF+EM+ +G   D+I     + AC        GI   N+ +QI+      G    L
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISAC-------AGIQALNQGQQIHAQSYISGYSEDL 551

Query: 602 EHFACMVDLLGRAGRLSEA 620
                +V L  R GR  +A
Sbjct: 552 SIGNALVSLYARCGRAQDA 570



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 228/471 (48%), Gaps = 4/471 (0%)

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + N  T   + E C      +  +++HA   KSGF+    +G+ LI +Y   G    A  
Sbjct: 7   RANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIK 66

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F  +   +V   N +I        +     +F  +++ +  P++ TF +V+  C     
Sbjct: 67  LFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKA 126

Query: 276 -VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
             +  +Q+H   +  G      V N ++ +Y K+G  + A+ +F+ +  ++ +SW A+IS
Sbjct: 127 PFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMIS 186

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           G  ++G   +AI  F +     +       ++V+  C+     +LG QLHGF +K G  S
Sbjct: 187 GLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSS 246

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +  +  ALV +Y++ G+L +A  +      +    +N+++SG  ++   D    + LF +
Sbjct: 247 ETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDR--ALQLFEK 304

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            +L  M+PD VT + LLS  AS     +G+ LH+Y IK G ++D+I+  +L+ +Y KC  
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           I+ A + F      ++V WN ML AY   G    +  +F +M+ EG  P+  +   +L+ 
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
           C   G  + G  +  ++ +  G +  +   + ++D+  + G L  A  ++ 
Sbjct: 425 CTSLGALDLGEQIHTQVIK-SGFQFNVYVCSVLIDMYAKHGELDTARGILQ 474



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 183/361 (50%), Gaps = 1/361 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++     G L LG+ +H  ++KSG Q + +  + LI++YAK   LD A+ +   + 
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               ++WT++I GY     +   L +  +M     + +    S  + AC+ ++    G+Q
Sbjct: 478 EEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ 537

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA +  SG+  ++ +G +L+S+Y   G  ++A   F  +  KD    N +I  + ++G 
Sbjct: 538 IHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGH 597

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VF  +  +  E N +TF + +S       +++GKQ+H + +K G   E    N 
Sbjct: 598 CEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNV 657

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++T+Y K G  E+A+R F  + E+N++SW A+I+GY + G+G +A++ F E   LG+  +
Sbjct: 658 LITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPN 717

Query: 361 SSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    +  GL      + +HG +        +VD+  +   L  AR  +
Sbjct: 718 HVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFI 777

Query: 420 D 420
           +
Sbjct: 778 E 778



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 125/272 (45%), Gaps = 16/272 (5%)

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           GI  +      + +GC    +L    +LH    K G+  +  LG+ L+DIY   G++ +A
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLS 474
             L D       + +N ++SG + K    +  V+ LFS      + PD  TF+ +L + S
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQ--VLGLFSLMITENVTPDESTFASVLRACS 122

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
             +A       +HA  I  G+ +  +V N LI +Y+K G +D A  +F+ +  +D VSW 
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWV 182

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM+S  + +G    A+LLF +M +    P       VL AC         I LF   EQ+
Sbjct: 183 AMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACT-------KIELFKLGEQL 235

Query: 595 YGLRPIL----EHFAC--MVDLLGRAGRLSEA 620
           +G         E F C  +V L  R G L  A
Sbjct: 236 HGFIVKWGLSSETFVCNALVTLYSRWGNLIAA 267



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 17/191 (8%)

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G+  +  T+  L     +   L+  + LHA   K+G+  + ++G+ LI +Y   G +D A
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F  I   ++  WN ++S      L    L LF  M  E   PD+ +   VL+AC   
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRAC--- 121

Query: 579 GLSEGGICLFNEIEQIYGLRPILEH------FAC--MVDLLGRAGRLSEAMNLINSSPFS 630
               GG   F   EQI+    I+ H        C  ++DL  + G +  A  L+    F 
Sbjct: 122 ---SGGKAPFQVTEQIHA--KIIHHGFGSSPLVCNPLIDLYSKNGHVDLA-KLVFERLFL 175

Query: 631 ESPLLWRTLVS 641
           +  + W  ++S
Sbjct: 176 KDSVSWVAMIS 186


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/664 (33%), Positives = 377/664 (56%), Gaps = 2/664 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +HA + K    ++TF  N LI LY  F    +A+++F  ML    +T+ +LI G+  
Sbjct: 163 GRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQ 222

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G  E  L I  +M  S  + +  T + +L AC+ + D   G+Q+H++ +K+G   +   
Sbjct: 223 CGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT 282

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL+ +Y   G    A ++F      +V   N M++ Y +  +   +F +F  + ++  
Sbjct: 283 EGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI 342

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN +T+  ++  C     +E G+Q+H L++K G   ++ V   ++ MY K+G  ++A +
Sbjct: 343 HPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARK 402

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           + + + +R+++SWT++I+GYV+     +A+  F E  D G+  D+  LA+    C+    
Sbjct: 403 ILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKA 462

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           +  GLQ+H      GY +D+ +   LV++YA+ G  + A  L      K    +N ++SG
Sbjct: 463 MRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISG 522

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F +  +   +  +++F +   AG + +  TF   +S  A+ A + +G+ +H  ++KTG+ 
Sbjct: 523 FGQ--SRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHT 580

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           ++  V NALI++Y KCGSI+ A  IF  +S R+ VSWN ++++ + HG G  AL LF++M
Sbjct: 581 SETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQM 640

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K+EG  P+D++ +GVL AC + GL E G+  F  +  +YGL PI +H+AC+VD+LGRAG+
Sbjct: 641 KQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQ 700

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A   ++  P + + ++WRTL+S  K+  N +   LA+K LL+LEP D+ S++L+SN 
Sbjct: 701 LDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNA 760

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA  G      +VR  M D  + KE G SWIE+ + +H F    + HP S++IY  L  L
Sbjct: 761 YAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSEL 820

Query: 737 NDEM 740
           ND +
Sbjct: 821 NDRL 824



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/591 (25%), Positives = 286/591 (48%), Gaps = 33/591 (5%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           N WP +++I             HA  +  G   D    N LI+LYAK   +  A+++F  
Sbjct: 57  NRWPLVLEI-------------HATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKE 103

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF- 177
           +  R  ++W +++ GY   G  +    +   M+ +      +  S +L AC+  + ++F 
Sbjct: 104 LSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACT--KGKLFA 161

Query: 178 -GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G  IHA   K  F +  FVG +LI++Y   G F+ AE VF  + + D    N +I  + 
Sbjct: 162 QGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHA 221

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           + G  E A  +F  +  S   P+  T  ++++ C     +++GKQLH   +K G+  +  
Sbjct: 222 QCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYI 281

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
              +++ +Y K G  E A  +F+     N++ W  ++  Y +     K+   F +    G
Sbjct: 282 TEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG 341

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +      ++  C+    +ELG Q+H  +IK+G+ SD+ +   L+D+Y+K G L  AR
Sbjct: 342 IHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKAR 401

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            +L+    +    + ++++G+++   D  E+ +  F + +  G+ PD +  +   S  A 
Sbjct: 402 KILEMLEKRDVVSWTSMIAGYVQH--DFCEEALATFKEMQDCGVWPDNIGLASAASACAG 459

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              + +G  +HA    +GYAAD+ + N L+ +YA+CG  + AF +F+ I  +D ++WN +
Sbjct: 460 IKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGL 519

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S +    L K AL++F +M + G   +  + +  + A   + L++       + +Q++G
Sbjct: 520 ISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISA--LANLAD-----IKQGKQVHG 572

Query: 597 LRPILEHFA------CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
                 H +       ++ L G+ G + +A  +I S     + + W T+++
Sbjct: 573 RAVKTGHTSETEVANALISLYGKCGSIEDA-KMIFSEMSLRNEVSWNTIIT 622



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 224/475 (47%), Gaps = 6/475 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+ G+ +H++LLK+G   D     +L++LY K   ++ A  +F+     + + W  ++
Sbjct: 259 GDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLML 318

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y    D      I   M  +    N+ T   IL  C+       GEQIH+ +IK+GFE
Sbjct: 319 VAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++++V   LI MY   GC  +A  +   L  +DV     MI  Y +    E A   F  +
Sbjct: 379 SDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P++    +  S C     + +G Q+H      G   +IS+ N +V +Y + G S
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRS 498

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           EEA  +F  I  ++ I+W  LISG+ +S    +A+  F++    G   +     + I   
Sbjct: 499 EEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISAL 558

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  ++++ G Q+HG A+K G+ S+  +  AL+ +Y K G ++ A+M+    S +    +N
Sbjct: 559 ANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWN 618

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            I++   +     E   + LF Q +  G++P+ VTF  +L+ + S   LV     +  S+
Sbjct: 619 TIITSCSQHGRGLE--ALDLFDQMKQEGLKPNDVTFIGVLA-ACSHVGLVEEGLSYFKSM 675

Query: 492 KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
              Y  + I  +   ++ +  + G +D A +    +    + + W  +LSA  +H
Sbjct: 676 SNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++    +G ++LG+ +H+  +K+G ++D + +  LI++Y+K+  LD A+K+ + + 
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE 408

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  ++WTS+I GY+     E  L    +M       +    +    AC+ ++    G Q
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA    SG+  ++ +  +L+++Y   G   EA ++FR + +KD    N +I  + ++  
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRL 528

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + A  VF+ +  +  + N +TF + IS       +++GKQ+HG AVK G   E  V NA
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++++YGK G  E+A+ +F  +S RN +SW  +I+   + G G +A++ F +    G+  +
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648

Query: 361 SSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    +E GL      +  +G          +VDI  + G L  AR  +
Sbjct: 649 DVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFV 708

Query: 420 D 420
           D
Sbjct: 709 D 709


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 220/664 (33%), Positives = 376/664 (56%), Gaps = 2/664 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +HA + K    ++TF  N LI LY  F    +A+++F  ML    +T+ +LI G+  
Sbjct: 163 GRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQ 222

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G  E  L I  +M  S  + +  T + +L AC+ + D   G+Q+H++ +K+G   +   
Sbjct: 223 CGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT 282

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL+ +Y   G    A ++F      +V   N M++ Y +  +   +F +F  + ++  
Sbjct: 283 EGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI 342

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN +T+  ++  C     +E G+Q+H L++K G   ++ V   ++ MY K+   ++A +
Sbjct: 343 HPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARK 402

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           + + + +R+++SWT++I+GYV+     +A+  F E  D G+  D+  LA+    C+    
Sbjct: 403 ILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKA 462

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           +  GLQ+H      GY +D+ +   LV++YA+ G  + A  L      K    +N ++SG
Sbjct: 463 MRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISG 522

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F +  +   E  +++F +   AG + +  TF   +S  A+ A + +G+ +H  ++KTG+ 
Sbjct: 523 FGQ--SRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHT 580

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           ++  V NALI++Y KCGSI+ A  IF  +S R+ VSWN ++++ + HG G  AL LF++M
Sbjct: 581 SETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQM 640

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K+EG  P+D++ +GVL AC + GL E G+  F  +  +YGL PI +H+AC+VD+LGRAG+
Sbjct: 641 KQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQ 700

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A   ++  P + + ++WRTL+S  K+  N +   LA+K LL+LEP D+ S++L+SN 
Sbjct: 701 LDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNA 760

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA  G      +VR  M D  + KE G SWIE+ + +H F    + HP S++IY  L  L
Sbjct: 761 YAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSEL 820

Query: 737 NDEM 740
           ND +
Sbjct: 821 NDRL 824



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 146/591 (24%), Positives = 285/591 (48%), Gaps = 33/591 (5%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           N WP +++I             HA  +  G   D    N LI+LYAK   +  A+++F  
Sbjct: 57  NRWPLVLEI-------------HATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKE 103

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF- 177
           +  R  ++W +++ GY   G  +    +   M+ +      +  S +L AC+  + ++F 
Sbjct: 104 LSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACT--KGKLFA 161

Query: 178 -GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G  IHA   K  F +  FVG +LI++Y   G F+ AE VF  + + D    N +I  + 
Sbjct: 162 QGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHA 221

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           + G  E A  +F  +  S   P+  T  ++++ C     +++GKQLH   +K G+  +  
Sbjct: 222 QCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYI 281

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
              +++ +Y K G  E A  +F+     N++ W  ++  Y +     K+   F +    G
Sbjct: 282 TEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG 341

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +      ++  C+    +ELG Q+H  +IK+G+ SD+ +   L+D+Y+K   L  AR
Sbjct: 342 IHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKAR 401

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            +L+    +    + ++++G+++   D  E+ +  F + +  G+ PD +  +   S  A 
Sbjct: 402 KILEMLEKRDVVSWTSMIAGYVQH--DFCEEALATFKEMQDCGVWPDNIGLASAASACAG 459

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              + +G  +HA    +GYAAD+ + N L+ +YA+CG  + AF +F+ I  +D ++WN +
Sbjct: 460 IKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGL 519

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S +    L + AL++F +M + G   +  + +  + A   + L++       + +Q++G
Sbjct: 520 ISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISA--LANLAD-----IKQGKQVHG 572

Query: 597 LRPILEHFA------CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
                 H +       ++ L G+ G + +A  +I S     + + W T+++
Sbjct: 573 RAVKTGHTSETEVANALISLYGKCGSIEDA-KMIFSEMSLRNEVSWNTIIT 622



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 223/475 (46%), Gaps = 6/475 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+ G+ +H++LLK+G   D     +L++LY K   ++ A  +F+     + + W  ++
Sbjct: 259 GDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLML 318

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y    D      I   M  +    N+ T   IL  C+       GEQIH+ +IK+GFE
Sbjct: 319 VAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++++V   LI MY    C  +A  +   L  +DV     MI  Y +    E A   F  +
Sbjct: 379 SDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P++    +  S C     + +G Q+H      G   +IS+ N +V +Y + G S
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRS 498

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           EEA  +F  I  ++ I+W  LISG+ +S    +A+  F++    G   +     + I   
Sbjct: 499 EEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISAL 558

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  ++++ G Q+HG A+K G+ S+  +  AL+ +Y K G ++ A+M+    S +    +N
Sbjct: 559 ANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWN 618

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            I++   +     E   + LF Q +  G++P+ VTF  +L+ + S   LV     +  S+
Sbjct: 619 TIITSCSQHGRGLE--ALDLFDQMKQEGLKPNDVTFIGVLA-ACSHVGLVEEGLSYFKSM 675

Query: 492 KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
              Y  + I  +   ++ +  + G +D A +    +    + + W  +LSA  +H
Sbjct: 676 SNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++    +G ++LG+ +H+  +K+G ++D + +  LI++Y+K+  LD A+K+ + + 
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE 408

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  ++WTS+I GY+     E  L    +M       +    +    AC+ ++    G Q
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA    SG+  ++ +  +L+++Y   G   EA ++FR + +KD    N +I  + ++  
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRL 528

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VF+ +  +  + N +TF + IS       +++GKQ+HG AVK G   E  V NA
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++++YGK G  E+A+ +F  +S RN +SW  +I+   + G G +A++ F +    G+  +
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648

Query: 361 SSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    +E GL      +  +G          +VDI  + G L  AR  +
Sbjct: 649 DVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFV 708

Query: 420 D 420
           D
Sbjct: 709 D 709


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/673 (33%), Positives = 377/673 (56%), Gaps = 10/673 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG  VH  +++ G   D    + L+++YAK  RLD + K+F  + V++ + W+++I 
Sbjct: 191 DGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIA 250

Query: 133 GYLDDGDYESVLGIACDMYRSEEKF----NEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           G + +   E +LG+  ++++  +K     ++   + +  +C+ L     G Q+HA A+K 
Sbjct: 251 GCVQND--EHILGL--ELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKC 306

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            F +++ VGT+ + MY   G   +A+ +F  L    ++C N +I+   +  +   A   F
Sbjct: 307 DFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFF 366

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             LL S    N+ + +   S C    G  +G+QLH L+VK  +   I V N+I+ MYGK 
Sbjct: 367 QLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKC 426

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
               EA  MFD +  R+ +SW A+I+ + ++G+  + +N F   L L +  D     +V+
Sbjct: 427 EALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVL 486

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS    L  G+++H   IK G   D  +G AL+D+Y K G ++ A+ + D    +   
Sbjct: 487 KACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMV 546

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +NAI++GF   +    ED    F +     ++PD  T++ +L   A+ A +  G+ +H 
Sbjct: 547 SWNAIIAGF--TLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHG 604

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             IK    +DV + + L+ MY+KCG++  +  +F+   ++D V+WNAM+  YA HGLG+ 
Sbjct: 605 QIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEE 664

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL  FE M+ E   P+  + + +L+AC + G  + G+  FN +   YGL P +EH++CM+
Sbjct: 665 ALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMI 724

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           D++GR+GR+SEA+ LI   PF    ++WRTL+S+ K+  N + +  A+  +L LEP+D+ 
Sbjct: 725 DIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSS 784

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           + IL+SN+YA  GM  + +++R  M   +L KE GCSWIE+  ++H F+   K HP  EE
Sbjct: 785 ACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEE 844

Query: 729 IYSKLDLLNDEMK 741
           IY  L +L DEMK
Sbjct: 845 IYKILSVLLDEMK 857



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/606 (26%), Positives = 291/606 (48%), Gaps = 20/606 (3%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
           SQ D    N +I+ YA    +++A + F     R  ++W S++ G+L +G+    + +  
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 149 DMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
           DM RSEE  F++ T +V+L+ACS+LED   G Q+H   ++ GF  +V  G++L+ MY   
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
               ++  +F  +  K+  C + +I    +  E  +   +F  +       +   + +V 
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
             C     ++ G QLH  A+K     +I+VG A + MY K G   +A+R+F+++ + +L 
Sbjct: 285 RSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQ 344

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
            + A+I G VR+  G +A+  F   L  G+  +   L+     C+       G QLH  +
Sbjct: 345 CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLS 404

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           +K    S++ +  +++D+Y K   L  A  + D    +    +NA+++   +    +EE+
Sbjct: 405 VKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQN--GNEEE 462

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
            + LF+      MEPD  T+  +L   +SQ  L  G  +H   IK+G   D  VG ALI 
Sbjct: 463 TLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALID 522

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY KCG I+ A +I   I  + +VSWNA+++ + L    + A   F EM +    PD+ +
Sbjct: 523 MYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFT 582

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF------ACMVDLLGRAGRLSEAM 621
              VL AC  + L+  G+      +QI+G    LE        + +VD+  + G + ++ 
Sbjct: 583 YAIVLDAC--ANLASVGLG-----KQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSA 635

Query: 622 NLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
            +   +P ++  + W  ++       +           +L ++ P  A +F+ +    A 
Sbjct: 636 LVFEKAP-NKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHA-TFVSILRACAH 693

Query: 680 QGMLDE 685
            G +D+
Sbjct: 694 MGFIDK 699



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 237/477 (49%), Gaps = 4/477 (0%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G   LK+G  +HA  LK    +D       +++YAK   L  AQ++F+ +   S   + +
Sbjct: 289 GLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNA 348

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G + +      L     + +S   FNE + S    AC+ ++  + G Q+H+ ++KS 
Sbjct: 349 IIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKST 408

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             +N+ V  S++ MY       EA  +F  +  +D    N +I  + + G  E   ++F 
Sbjct: 409 LRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFA 468

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +L    EP+ +T+ +V+  C     +  G ++H   +K G+  +  VG A++ MY K G
Sbjct: 469 SMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCG 528

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           M EEA+++ D I ++ ++SW A+I+G+    H   A + F E L + +  D+   A V+D
Sbjct: 529 MIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLD 588

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+  +++ LG Q+HG  IK    SDV + + LVD+Y+K G+++ + ++ +    K    
Sbjct: 589 ACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVT 648

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHA 488
           +NA++ G+ +      E+ +  F + +L  + P+  TF  +L   A    + +G    +A
Sbjct: 649 WNAMICGYAQHGLG--EEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNA 706

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
              + G    +   + +I +  + G I  A ++ + +  + D V W  +LS   +HG
Sbjct: 707 MLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHG 763



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 246/525 (46%), Gaps = 42/525 (8%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S I++ CS       G+Q HA  I SGF  +V++   L+ MY        A  VF  +
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD----------FEPN----------- 259
           + +DV   N MI  Y  AGE  +A   F      D          F  N           
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 260 -----------DYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
                        TF  V+  C   E+ G+  G Q+HGL V+ G  +++  G+A++ MY 
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGL--GIQVHGLIVRMGFYKDVVTGSALLDMYA 222

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K    +++ ++F  I  +N + W+A+I+G V++      +  F E   +GI    S  A+
Sbjct: 223 KCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYAS 282

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V   C+  S L++G QLH  A+K  + SD+ +GTA +D+YAK G L  A+ + +      
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHS 342

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +NAI+ G +    +   + +  F     +G+  + ++ S   S  AS    + GR L
Sbjct: 343 LQCYNAIIVGCVRN--EKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQL 400

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H+ S+K+   +++ V N+++ MY KC ++  A  +F  +  RD VSWNA+++A+  +G  
Sbjct: 401 HSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNE 460

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE-IEQIYGLRPILEHFA 605
           +  L LF  M R    PD  +   VL+AC        G+ + N  I+   GL   +    
Sbjct: 461 EETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG--G 518

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
            ++D+  + G + EA   I+     ++ + W  +++   L+ +S+
Sbjct: 519 ALIDMYCKCGMIEEAKK-IHDRIEQQTMVSWNAIIAGFTLLKHSE 562



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 230/517 (44%), Gaps = 85/517 (16%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           TF+++I  C +   ++ GKQ H   +  G + ++ + N ++ MY +      A ++F+ +
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 322 SERNLISWTALISGYVRSGHGGKA------------------INGFLE----------FL 353
           S+R++IS+  +ISGY  +G    A                  ++GFL+          FL
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 354 DLG----ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
           D+G    +  D +  A V+  CSV  +  LG+Q+HG  ++ G+  DV  G+AL+D+YAK 
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV-MVLFSQQRLAGMEPDPVTFS 468
             L  +  +      K    ++AI++G ++   +DE  + + LF + +  G+      ++
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQ---NDEHILGLELFKEMQKVGIGVSQSIYA 281

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +    A  + L  G  LHA+++K  + +D+ VG A + MYAKCGS+  A +IF  +   
Sbjct: 282 SVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKH 341

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC------------- 575
            +  +NA++     +  G  AL  F+ + + G   ++IS+ G   AC             
Sbjct: 342 SLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLH 401

Query: 576 ---IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA---------------GRL 617
              + S L    IC+ N I  +YG    L    CM D + R                G  
Sbjct: 402 SLSVKSTL-RSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNE 460

Query: 618 SEAMNLINS--------SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
            E +NL  S          F+   +L +   S   L +  +      K  L L+    G+
Sbjct: 461 EETLNLFASMLRLRMEPDQFTYGSVL-KACSSQQALNSGMEIHNRIIKSGLGLDSFVGGA 519

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
            I   +MY   GM++EA K+       R+ ++   SW
Sbjct: 520 LI---DMYCKCGMIEEAKKIHD-----RIEQQTMVSW 548


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/669 (33%), Positives = 371/669 (55%), Gaps = 2/669 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG  +H   ++ G   D    + L+++YAK N L+ +  +F  +  ++ I+W++ I 
Sbjct: 172 DQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIA 231

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G + +      L +  +M R     ++ T + +  +C+ L     G Q+H  A+K+ F +
Sbjct: 232 GCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGS 291

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +V VGT+ + MY       +A  +F  L   +++  N MI+ Y +  +   AF +F+ L 
Sbjct: 292 DVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQ 351

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            + F  ++ + +  +S      G  EG QLHGLA+K  +   I V NAI+ MYGK G   
Sbjct: 352 KNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALV 411

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA  +FD +  R+ +SW A+I+   ++   GK ++ F   L   +  D     +V+  C+
Sbjct: 412 EASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACA 471

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
                  G+++HG  IK G    + +G+ALVD+Y+K G ++ A  +      +    +NA
Sbjct: 472 GQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNA 531

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I+SGF   +    ED    FS     G+EPD  T++ +L   A+ A +  G+ +HA  IK
Sbjct: 532 IISGF--SLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIK 589

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
               +DV + + L+ MY+KCG++  +  +F+    RD V+WNAM+  +A HGLG+ AL L
Sbjct: 590 LELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALEL 649

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           FE M  E   P+  + + VL+AC + G ++ G+  F ++  IY L P LEH++CMVD+LG
Sbjct: 650 FEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILG 709

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           R+G++ EA+ LI   PF    ++WRTL+S+ K+  N + +  A+  LL L+P+D+ ++ L
Sbjct: 710 RSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTL 769

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+YA  GM  + +K+R TM    L KE GCSWIE+  ++H F+   K HP+ E IYS 
Sbjct: 770 LSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSL 829

Query: 733 LDLLNDEMK 741
           LDLL  +M+
Sbjct: 830 LDLLICDMR 838



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 164/605 (27%), Positives = 274/605 (45%), Gaps = 48/605 (7%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS---------- 123
           LK G+  HA ++ SG     F  N LI +Y K   L+ A K+F+ M  R           
Sbjct: 40  LKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFG 99

Query: 124 ----------------------AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
                                  ++W SLI GYL +GD +  + +   M      F+  T
Sbjct: 100 CAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTT 159

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
            +V L+ CSLLED++ G QIH  A++ GF+ +V  G++L+ MY       ++ +VF  L 
Sbjct: 160 LAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELP 219

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            K+    +  I    +  +      +F  +       +  T+ +V   C        G Q
Sbjct: 220 DKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQ 279

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           LH  A+K     ++ VG A + MY K     +A ++F  + + NL S+ A+I GY R+  
Sbjct: 280 LHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQ 339

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
           G +A   FL+        D   L+  +   +V      GLQLHG AIK    S++ +  A
Sbjct: 340 GFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANA 399

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           ++D+Y K G L  A  L D    +    +NAI++   +   + E   +  F     + ME
Sbjct: 400 ILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQN--ESEGKTLSHFGAMLRSKME 457

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           PD  T+  +L   A Q     G  +H   IK+G    + VG+AL+ MY+KCG ++ A +I
Sbjct: 458 PDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKI 517

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
              + ++ +VSWNA++S ++L    + +   F  M   G  PD+ +   VL  C  + L+
Sbjct: 518 HYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTC--ANLA 575

Query: 582 EGGICLFNEIEQIYGLRPILEHF------ACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
             G+      +QI+     LE        + +VD+  + G + +++ +   +P  +S + 
Sbjct: 576 TVGLG-----KQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDS-VT 629

Query: 636 WRTLV 640
           W  ++
Sbjct: 630 WNAMI 634



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 160/575 (27%), Positives = 257/575 (44%), Gaps = 45/575 (7%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S I + CS       G++ HA  I SGF   VFV   LI MY        A  VF  +
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVF------------VHLLSSDFEPNDYTFTNVIS 268
             +D+   N M+     AG  E+A  VF              L+S   +  D   +  + 
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 269 VCYENLGV-----------------EE---GKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +   +LGV                 E+   G Q+HG+AV+ G   ++  G+A+V MY K 
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              E++  +F  + ++N ISW+A I+G V++    + +  F E    GI    S  A+V 
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+  S   LG QLH  A+K  + SDV +GTA +D+YAK  ++  A  L          
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325

Query: 429 EFNAILSGFMEKIADDEE--DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
            +NA++ G+    A +E+      LF Q +      D V+ S  LS +A       G  L
Sbjct: 326 SYNAMIIGY----ARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQL 381

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H  +IK+  ++++ V NA++ MY KCG++  A  +F  +  RD VSWNA+++A   +   
Sbjct: 382 HGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESE 441

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE-IEQIYGLRPILEHFA 605
              L  F  M R    PD+ +   VL+AC        G+ +    I+   GL+  +   +
Sbjct: 442 GKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG--S 499

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL--E 663
            +VD+  + G + EA   I+     ++ + W  ++S   L   S+ S      +L++  E
Sbjct: 500 ALVDMYSKCGMMEEAEK-IHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVE 558

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           P D  ++  V +  A    +    ++   M  L L
Sbjct: 559 P-DNFTYATVLDTCANLATVGLGKQIHAQMIKLEL 592



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 2/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G      G  VH  ++KSG     F  + L+++Y+K   ++ A+K+   +  ++
Sbjct: 466 VLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQT 525

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W ++I G+      E        M     + +  T + +L+ C+ L     G+QIHA
Sbjct: 526 MVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHA 585

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             IK    ++V++ ++L+ MY   G   ++  +FR    +D    N MI  +   G  E 
Sbjct: 586 QMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEE 645

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVGNAIV 302
           A  +F H+L  + +PN  TF +V+  C      ++G      +A  + +  ++   + +V
Sbjct: 646 ALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMV 705

Query: 303 TMYGKHGMSEEAERMF-DAISERNLISWTALIS 334
            + G+ G  EEA R+  D   E + I W  L+S
Sbjct: 706 DILGRSGQVEEALRLIQDMPFEADAIIWRTLLS 738


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/667 (33%), Positives = 374/667 (56%), Gaps = 2/667 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            +LG+ +H  + K G  ++TF  N LI+LY +     +A ++F  ML   ++T+ +LI G
Sbjct: 159 FQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISG 218

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +   G  +  LGI  +M  S    +  T + +L ACS + D   G+Q+H++ +K+G   +
Sbjct: 219 HAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLD 278

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             +  SL+ +Y  SG   EA  +F      +V   N M++ Y +  +   +F +F  +L+
Sbjct: 279 YIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLA 338

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +   PN +T+  ++  C     +  G+Q+H L +K G   ++ V   ++ MY K+G  ++
Sbjct: 339 AGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDK 398

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+R+ D I E++++SWT++I+GYV+     +A+  F E    GI  D+  LA+ I  C+ 
Sbjct: 399 AQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAG 458

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              +  G Q+H      GY +DV +   LV +YA+ G  K A    +    K    +N +
Sbjct: 459 IKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGL 518

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SGF +  +   E+ + +F +   AG + +  TF   +S SA+ A + +G+ +HA  IKT
Sbjct: 519 ISGFAQ--SGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT 576

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY ++  + NALI++Y KCGSI+ A   F  ++ R+ VSWN +++  + HG G  AL LF
Sbjct: 577 GYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLF 636

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           ++MK++G  P D++ +GVL AC + GL E G+C F  +   +G+ P  +H+AC+VD+LGR
Sbjct: 637 DQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGR 696

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AG+L  A   +   P     ++WRTL+S  K+  N +    A+K LL+LEP D+ S++L+
Sbjct: 697 AGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLL 756

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN YA  G      ++R  M D  + KE G SWIE+ + +H F    + HP +++IY+ L
Sbjct: 757 SNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFL 816

Query: 734 DLLNDEM 740
             LND +
Sbjct: 817 SHLNDRL 823



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 247/481 (51%), Gaps = 2/481 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA  +  G        N LI+LYAK   +  A+++F+ + VR  ++W +++ GY  +G 
Sbjct: 64  IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E  + +  +M+RS      +  S IL AC+  E    G  IH    K GF +  FVG +
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA 183

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           LIS+Y     FR A+ VF  + Y D    N +I  + + G  + A  +F  +  S   P+
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T  ++++ C     + +GKQLH   +K G+  +  +  +++ +Y K G  EEA ++FD
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD 303

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
           +    N++ W  ++  Y +     K+ + F   L  G+  +      ++  C+    + L
Sbjct: 304 SGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGL 363

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G Q+H   IK+G+ SD+ +   L+D+Y+K G L  A+ +LD    K    + ++++G+++
Sbjct: 364 GEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQ 423

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
              +  ++ +  F + +  G+ PD +  +  +S  A    + +G  +HA    +GY+ADV
Sbjct: 424 H--EFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADV 481

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            + N L+ +YA+CG    AF  F+ I  ++ ++WN ++S +A  GL + AL +F +M + 
Sbjct: 482 SIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQA 541

Query: 560 G 560
           G
Sbjct: 542 G 542



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 223/474 (47%), Gaps = 4/474 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+ G+ +H++LLK+G   D     +L++LY K   ++ A ++FD     + + W  ++
Sbjct: 258 GDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLML 317

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y    D      I   M  +  + N+ T   +L  C+   +   GEQIH+  IK+GF+
Sbjct: 318 VAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQ 377

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++++V   LI MY   G   +A+ +   +  KDV     MI  Y +    + A   F  +
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEM 437

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            +    P++    + IS C     V +G Q+H      G   ++S+ N +V +Y + G+S
Sbjct: 438 QACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGIS 497

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           +EA   F+AI  +  I+W  LISG+ +SG   +A+  F++    G   +     + I   
Sbjct: 498 KEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISAS 557

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  ++++ G Q+H   IK GY S+  +  AL+ +Y K G ++ A+M     + +    +N
Sbjct: 558 ANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWN 617

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYS 490
            I++   +     E   + LF Q +  G++P  VTF  +L+  +    +  G     + S
Sbjct: 618 TIITCCSQHGRGLE--ALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMS 675

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            + G          ++ +  + G +D A +  + +    D + W  +LSA  +H
Sbjct: 676 NEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVH 729



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 183/361 (50%), Gaps = 1/361 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++    +G++ LG+ +H+  +K+G Q+D + +  LI++Y+K+  LD AQ++ D + 
Sbjct: 348 YPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE 407

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  ++WTS+I GY+     +  L    +M       +    +  + AC+ ++    G Q
Sbjct: 408 EKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQ 467

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA    SG+  +V +   L+ +Y   G  +EA + F  + +K+    N +I  + ++G 
Sbjct: 468 IHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGL 527

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VF+ +  +  + N +TF + IS       +++GKQ+H   +K G   E  + NA
Sbjct: 528 YEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNA 587

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++++YGK G  E+A+  F  +++RN +SW  +I+   + G G +A++ F +    G+   
Sbjct: 588 LISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPS 647

Query: 361 SSCLATVIDGCSVCSNLELGL-QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    +E GL      + +HG          +VDI  + G L  A+  +
Sbjct: 648 DVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFV 707

Query: 420 D 420
           +
Sbjct: 708 E 708



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 181/353 (51%), Gaps = 19/353 (5%)

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++H  A+  G+     +GN ++ +Y K G    A R+F+ +S R+ +SW A++SGY ++G
Sbjct: 63  EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
            G +A+  + E    G+      L++++  C+     +LG  +H    K G+ S+  +G 
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGN 182

Query: 401 ALVDIYAKGGDLKSA-RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           AL+ +Y +    + A R+  D   C  +  FN ++SG  +    D    + +F + +L+G
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCD-SVTFNTLISGHAQCGHGDR--ALGIFDEMQLSG 239

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           + PD VT + LL+  ++   L +G+ LH+Y +K G + D I+  +L+ +Y K G I+ A 
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299

Query: 520 QIFKGISDRDIVSWNAMLSAYA-LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
           QIF      ++V WN ML AY  +  L K +  +F  M   G  P+  +   +L+ C ++
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAK-SFDIFYRMLAAGVRPNKFTYPCMLRTCTHT 358

Query: 579 GLSEGGICLFNEIEQIY------GLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
           G  E G+      EQI+      G +  +     ++D+  + G L +A  +++
Sbjct: 359 G--EIGLG-----EQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD 404


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/672 (33%), Positives = 370/672 (55%), Gaps = 4/672 (0%)

Query: 71   SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
            S  L+ G+ +H+ + + G  +D    N LI++YA+   L  A++LF  M  R  I+W ++
Sbjct: 343  SKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAI 402

Query: 131  IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            I GY    D    + +   M     K    T   +L AC+       G+ IH   ++SG 
Sbjct: 403  IAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGI 462

Query: 191  ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            ++N  +  +L++MY   G   EA+NVF G   +DV   N MI  + + G  E A+ +F  
Sbjct: 463  KSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQE 522

Query: 251  LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
            + + + EP++ TF +V+S C     +E GKQ+HG   + G+  ++++GNA++ MY + G 
Sbjct: 523  MQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGS 582

Query: 311  SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             ++A  +F ++  R+++SWTA+I G    G   KAI  F +  + G     S  ++++  
Sbjct: 583  LQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKV 642

Query: 371  CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            C+  + L+ G ++  + +  GY  D  +G AL+  Y+K G +  AR + D    +    +
Sbjct: 643  CTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSW 702

Query: 431  NAILSGFMEKIADDEEDVMVLFS-QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
            N I++G+ +   +      V F+ Q +   + P+  +F  LL+  +S + L  G+ +HA 
Sbjct: 703  NKIIAGYAQ---NGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAE 759

Query: 490  SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
             +K     DV VG ALI+MYAKCGS   A ++F  I ++++V+WNAM++AYA HGL   A
Sbjct: 760  IVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKA 819

Query: 550  LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
            L  F  M++EG  PD  +   +L AC ++GL   G  +F+ +E  YG+ P +EH+ C+V 
Sbjct: 820  LGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVG 879

Query: 610  LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
            LLGRA R  EA  LIN  PF     +W TL+   ++  N   +  A+   L L  ++   
Sbjct: 880  LLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAV 939

Query: 670  FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
            +IL+SN+YA  G  D+ AK+R  M    + KE G SWIE+D+ +H F+A+ + HPE+ EI
Sbjct: 940  YILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEI 999

Query: 730  YSKLDLLNDEMK 741
            Y++L  L+ EM+
Sbjct: 1000 YAELKRLSVEME 1011



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 176/615 (28%), Positives = 312/615 (50%), Gaps = 25/615 (4%)

Query: 14  FKSQQSLPPLKKKVPINTFSPNPKS--QVAYLCSISSVSCSERTLLFNDWPQLVKISIGS 71
            ++++   P ++ V  NT  P P    +  Y+  + +  C+ + LL    P+  +I    
Sbjct: 1   MRNERHCGPDREDVS-NTHQPRPTETERATYVALLQN--CTRKRLL----PEAKRI---- 49

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
                    HA ++++    D F +N LIN+Y K   +  A ++F  M  R  I+W SLI
Sbjct: 50  ---------HAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLI 100

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y   G  +    +  +M  +    N+ T   IL AC    +   G++IH+  IK+G++
Sbjct: 101 SCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQ 160

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +  V  SL+SMY   G    A  VF G++ +DV   N M+  Y +    +    +F  +
Sbjct: 161 RDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM 220

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            S    P+  T+ N++        ++EGK++H L V+ G+  +I VG A+VTM  + G  
Sbjct: 221 SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDV 280

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           + A++ F   ++R+++ + ALI+   + GH  +A   +      G+  + +   ++++ C
Sbjct: 281 DSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S    LE G  +H    + G+ SDV++G AL+ +YA+ GDL  AR L      +    +N
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           AI++G+  +  +D  + M L+ Q +  G++P  VTF  LLS  A+ +    G+ +H   +
Sbjct: 401 AIIAGYARR--EDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           ++G  ++  + NAL+ MY +CGS+  A  +F+G   RD++SWN+M++ +A HG  + A  
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYK 518

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF+EM+ E   PD+I+   VL  C      E G  +   I +  GL+  +     ++++ 
Sbjct: 519 LFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE-SGLQLDVNLGNALINMY 577

Query: 612 GRAGRLSEAMNLINS 626
            R G L +A N+ +S
Sbjct: 578 IRCGSLQDARNVFHS 592



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/513 (29%), Positives = 254/513 (49%), Gaps = 7/513 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ +H   ++ G  +D      L+ +  +   +D A++ F G   R  + + +LI  
Sbjct: 245 LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAA 304

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               G           M       N  T   IL ACS  +    G+ IH+   + G  ++
Sbjct: 305 LAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSD 364

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V +G +LISMY   G   +A  +F  +  +D+   N +I  Y +  +   A  ++  + S
Sbjct: 365 VQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS 424

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +P   TF +++S C  +    +GK +H   ++ G+     + NA++ MY + G   E
Sbjct: 425 EGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLME 484

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+ +F+    R++ISW ++I+G+ + G    A   F E  +  +  D+   A+V+ GC  
Sbjct: 485 AQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKN 544

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              LELG Q+HG   + G   DV LG AL+++Y + G L+ AR +      +    + A+
Sbjct: 545 PEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAM 604

Query: 434 LSGFMEKIADDEEDVMV--LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           + G     AD  ED+    LF Q +  G  P   TFS +L +  S ACL  G+ + AY +
Sbjct: 605 IGG----CADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYIL 660

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
            +GY  D  VGNALI+ Y+K GS+  A ++F  +  RDIVSWN +++ YA +GLG+ A+ 
Sbjct: 661 NSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVE 720

Query: 552 LFEEMKREGFAPDDISILGVLQAC-IYSGLSEG 583
              +M+ +   P+  S + +L AC  +S L EG
Sbjct: 721 FAYQMQEQDVVPNKFSFVSLLNACSSFSALEEG 753



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 292/580 (50%), Gaps = 18/580 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            +L+ G+ +H+ ++K+G Q D    N+L+++Y K   L  A+++F G+  R  +++ +++
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA---CSLLEDRIFGEQIHAFAIKS 188
             Y      +  LG+   M       ++ T   +L+A    S+L++   G++IH   ++ 
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE---GKRIHKLTVEE 258

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  +++ VGT+L++M    G    A+  F+G A +DV   N +I    + G +  AF  +
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQY 318

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             + S     N  T+ ++++ C  +  +E GK +H    + G   ++ +GNA+++MY + 
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC 378

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G   +A  +F  + +R+LISW A+I+GY R    G+A+  + +    G+         ++
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+  S    G  +H   ++ G  S+  L  AL+++Y + G L  A+ + +G   +   
Sbjct: 439 SACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVI 498

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N++++G  +      E    LF + +   +EPD +TF+ +LS   +   L  G+ +H 
Sbjct: 499 SWNSMIAGHAQH--GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
              ++G   DV +GNALI MY +CGS+  A  +F  +  RD++SW AM+   A  G    
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSG-LSEGGICLFNEIEQIYGLRPILEHFACM 607
           A+ LF +M+ EGF P   +   +L+ C  S  L EG   +   +   Y L   + +   +
Sbjct: 617 AIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN--AL 674

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           +    ++G +++A  + +  P        R +VS +K++A
Sbjct: 675 ISAYSKSGSMTDAREVFDKMPS-------RDIVSWNKIIA 707



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 255/485 (52%), Gaps = 12/485 (2%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   +L+ C+        ++IHA  +++    ++F+   LI+MY       +A  VF+ +
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             +DV   N +I  Y + G  + AF +F  + ++ F PN  T+ ++++ CY    +E GK
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++H   +K G  R+  V N++++MYGK G    A ++F  IS R+++S+  ++  Y +  
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
           +  + +  F +    GI  D      ++D  +  S L+ G ++H   ++ G  SD+R+GT
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           ALV +  + GD+ SA+    G + +    +NA+++   +   + E      + + R  G+
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVE--AFEQYYRMRSDGV 326

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
             +  T+  +L+  ++   L  G+ +H++  + G+++DV +GNALI+MYA+CG +  A +
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F  +  RD++SWNA+++ YA       A+ L+++M+ EG  P  ++ L +L AC  S  
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446

Query: 581 SEGGICLFNEIEQIYGLRPILE---HFA-CMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
              G  +  +I     LR  ++   H A  ++++  R G L EA N+   +  +   + W
Sbjct: 447 YADGKMIHEDI-----LRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ-ARDVISW 500

Query: 637 RTLVS 641
            ++++
Sbjct: 501 NSMIA 505



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 131/259 (50%), Gaps = 1/259 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K+   S  L  G+ V A++L SG + DT   N LI+ Y+K   +  A+++FD M  R 
Sbjct: 639 ILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRD 698

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W  +I GY  +G  ++ +  A  M   +   N+ +   +L ACS       G+++HA
Sbjct: 699 IVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHA 758

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K   + +V VG +LISMY   G   EA+ VF  +  K+V   N MI  Y + G +  
Sbjct: 759 EIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASK 818

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIV 302
           A   F  +     +P+  TFT+++S C     V EG Q+   +  ++GV+  I     +V
Sbjct: 819 ALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLV 878

Query: 303 TMYGKHGMSEEAERMFDAI 321
            + G+    +EAE + + +
Sbjct: 879 GLLGRARRFQEAETLINQM 897


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/685 (32%), Positives = 393/685 (57%), Gaps = 9/685 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-LVR 122
           L+K  I   + +LG+ VH  L++SG + D+   N LI+LY+K    + A+ +F+GM   R
Sbjct: 50  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 109

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
             ++W++++  + ++      +    DM       NE+  + ++ ACS       GE I+
Sbjct: 110 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 169

Query: 183 AFAIKSGF-ENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
            F +K+G+ E +V VG  LI M+   SG    A  VF  +  +++     MI  + + G 
Sbjct: 170 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 229

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +  A  +F+ +  S + P+ +T+++V+S C E   +  GKQLH   ++ G+  ++ VG +
Sbjct: 230 ARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCS 289

Query: 301 IVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK-AINGFLEFLDLG 356
           +V MY K    G  +++ ++F+ + E N++SWTA+I+ YV+SG   K AI  F + +   
Sbjct: 290 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGH 349

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +    ++V+  C   S+   G Q++ +A+K G  S   +G +L+ +YA+ G ++ AR
Sbjct: 350 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 409

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
              D    K    +NAI+ G+ + +    E+  +LF++    G+     TF+ LLS +AS
Sbjct: 410 KAFDILFEKNLVSYNAIVDGYAKNL--KSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 467

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              + +G  +H   +K GY ++  + NALI+MY++CG+I+ AFQ+F  + DR+++SW +M
Sbjct: 468 IGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSM 527

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++ +A HG    AL +F +M   G  P++I+ + VL AC + G+   G   FN + + +G
Sbjct: 528 ITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHG 587

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P +EH+ACMVDLLGR+G L EAM  INS P     L+WRTL+   ++  N++    A+
Sbjct: 588 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 647

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           + +L+ EP D  ++IL+SN++A  G   +  K+R +M +  L KEAGCSWIE+++++H F
Sbjct: 648 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRF 707

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
                 HP++ +IY +LD L  ++K
Sbjct: 708 HVGETSHPQAWQIYQELDQLASKIK 732



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 243/493 (49%), Gaps = 21/493 (4%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S++L++C    +   G+ +H   ++SG E +  V  +LIS+Y   G    A  +F G+
Sbjct: 46  TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 105

Query: 221 AYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
             K D+   + M+  +        A   F+ +L   F PN+Y F  VI  C        G
Sbjct: 106 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 165

Query: 280 KQLHGLAVKFGVVR-EISVGNAIVTMYGK-HGMSEEAERMFDAISERNLISWTALISGYV 337
           + ++G  VK G +  ++ VG  ++ M+ K  G    A ++FD + ERNL++WT +I+ + 
Sbjct: 166 EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 225

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           + G    AI+ FL+    G   D    ++V+  C+    L LG QLH   I+ G   DV 
Sbjct: 226 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 285

Query: 398 LGTALVDIYAK---GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +G +LVD+YAK    G +  +R + +         + AI++ +++    D+E +  LF +
Sbjct: 286 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE-LFCK 344

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
                + P+  +FS +L    + +    G  +++Y++K G A+   VGN+LI+MYA+ G 
Sbjct: 345 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 404

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           ++ A + F  + ++++VS+NA++  YA +   + A LLF E+   G     I I     A
Sbjct: 405 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG-----IGISAFTFA 459

Query: 575 CIYSGLSEGGICLFNEIEQIYG--LRPILEHFAC----MVDLLGRAGRLSEAMNLINSSP 628
            + SG +  G     + EQI+G  L+   +   C    ++ +  R G +  A  + N   
Sbjct: 460 SLLSGAASIGA--MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 517

Query: 629 FSESPLLWRTLVS 641
              + + W ++++
Sbjct: 518 -DRNVISWTSMIT 529



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 5/224 (2%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D +  + ++  C    N +LG  +H   ++ G   D  +   L+ +Y+K GD ++AR++ 
Sbjct: 43  DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 102

Query: 420 DGFSCKYT-AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
           +G   K     ++A++S F       E   +  F      G  P+   F+ ++   ++  
Sbjct: 103 EGMGNKRDLVSWSAMVSCFANN--SMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 160

Query: 479 CLVRGRSLHAYSIKTGY-AADVIVGNALITMYAK-CGSIDGAFQIFKGISDRDIVSWNAM 536
               G  ++ + +KTGY  ADV VG  LI M+ K  G +  A+++F  + +R++V+W  M
Sbjct: 161 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 220

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           ++ +A  G  + A+ LF +M+  G+ PD  +   VL AC   GL
Sbjct: 221 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 264


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/685 (32%), Positives = 393/685 (57%), Gaps = 9/685 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-LVR 122
           L+K  I   + +LG+ VH  L++SG + D+   N LI+LY+K    + A+ +F+GM   R
Sbjct: 32  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 91

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
             ++W++++  + ++      +    DM       NE+  + ++ ACS       GE I+
Sbjct: 92  DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 151

Query: 183 AFAIKSGF-ENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
            F +K+G+ E +V VG  LI M+   SG    A  VF  +  +++     MI  + + G 
Sbjct: 152 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 211

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +  A  +F+ +  S + P+ +T+++V+S C E   +  GKQLH   ++ G+  ++ VG +
Sbjct: 212 ARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCS 271

Query: 301 IVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK-AINGFLEFLDLG 356
           +V MY K    G  +++ ++F+ + E N++SWTA+I+ YV+SG   K AI  F + +   
Sbjct: 272 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGH 331

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +    ++V+  C   S+   G Q++ +A+K G  S   +G +L+ +YA+ G ++ AR
Sbjct: 332 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 391

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
              D    K    +NAI+ G+ + +    E+  +LF++    G+     TF+ LLS +AS
Sbjct: 392 KAFDILFEKNLVSYNAIVDGYAKNL--KSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 449

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              + +G  +H   +K GY ++  + NALI+MY++CG+I+ AFQ+F  + DR+++SW +M
Sbjct: 450 IGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSM 509

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++ +A HG    AL +F +M   G  P++I+ + VL AC + G+   G   FN + + +G
Sbjct: 510 ITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHG 569

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P +EH+ACMVDLLGR+G L EAM  INS P     L+WRTL+   ++  N++    A+
Sbjct: 570 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 629

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           + +L+ EP D  ++IL+SN++A  G   +  K+R +M +  L KEAGCSWIE+++++H F
Sbjct: 630 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRF 689

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
                 HP++ +IY +LD L  ++K
Sbjct: 690 HVGETSHPQAWQIYQELDQLASKIK 714



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 243/493 (49%), Gaps = 21/493 (4%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S++L++C    +   G+ +H   ++SG E +  V  +LIS+Y   G    A  +F G+
Sbjct: 28  TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 87

Query: 221 AYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
             K D+   + M+  +        A   F+ +L   F PN+Y F  VI  C        G
Sbjct: 88  GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 147

Query: 280 KQLHGLAVKFGVVR-EISVGNAIVTMYGK-HGMSEEAERMFDAISERNLISWTALISGYV 337
           + ++G  VK G +  ++ VG  ++ M+ K  G    A ++FD + ERNL++WT +I+ + 
Sbjct: 148 EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 207

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           + G    AI+ FL+    G   D    ++V+  C+    L LG QLH   I+ G   DV 
Sbjct: 208 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 267

Query: 398 LGTALVDIYAK---GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +G +LVD+YAK    G +  +R + +         + AI++ +++    D+E +  LF +
Sbjct: 268 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE-LFCK 326

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
                + P+  +FS +L    + +    G  +++Y++K G A+   VGN+LI+MYA+ G 
Sbjct: 327 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 386

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           ++ A + F  + ++++VS+NA++  YA +   + A LLF E+   G     I I     A
Sbjct: 387 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG-----IGISAFTFA 441

Query: 575 CIYSGLSEGGICLFNEIEQIYG--LRPILEHFAC----MVDLLGRAGRLSEAMNLINSSP 628
            + SG +  G     + EQI+G  L+   +   C    ++ +  R G +  A  + N   
Sbjct: 442 SLLSGAASIGA--MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 499

Query: 629 FSESPLLWRTLVS 641
              + + W ++++
Sbjct: 500 -DRNVISWTSMIT 511



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 5/224 (2%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D +  + ++  C    N +LG  +H   ++ G   D  +   L+ +Y+K GD ++AR++ 
Sbjct: 25  DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 84

Query: 420 DGFSCKYT-AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
           +G   K     ++A++S F       E   +  F      G  P+   F+ ++   ++  
Sbjct: 85  EGMGNKRDLVSWSAMVSCFANN--SMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 142

Query: 479 CLVRGRSLHAYSIKTGY-AADVIVGNALITMYAK-CGSIDGAFQIFKGISDRDIVSWNAM 536
               G  ++ + +KTGY  ADV VG  LI M+ K  G +  A+++F  + +R++V+W  M
Sbjct: 143 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 202

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           ++ +A  G  + A+ LF +M+  G+ PD  +   VL AC   GL
Sbjct: 203 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 246


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/671 (35%), Positives = 386/671 (57%), Gaps = 5/671 (0%)

Query: 74  LKLGQAVHAFLLK-SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           L+ G+A+HA ++K + S +  + AN+LIN YAK   L  A+ +FD +  +  I+W  LI 
Sbjct: 23  LQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLIN 82

Query: 133 GYLDDGDYES--VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           GY   G   S  V+ +   M       N HT S I  A S L    FG+Q HA AIK   
Sbjct: 83  GYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMAC 142

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             +VFVG+SL++MY  +G   EA  VF  +  ++      MI  Y     +  AF VF  
Sbjct: 143 FYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFEL 202

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +   + + N++ FT+V+S       V+ GKQ+H LAVK G++  +S+ NA+VTMY K G 
Sbjct: 203 MRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGS 262

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            +++ ++F+  +++N I+W+A+I+GY +SG   KA+  F      GI      L  V++ 
Sbjct: 263 LDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNA 322

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           CS    +E G Q+H + +K G+ S + + TALVD+YAK G  + AR   +         +
Sbjct: 323 CSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLW 382

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
            ++++G+++    + ED + L+ + ++ G+ P+ +T + +L   ++ A   +GR +HA +
Sbjct: 383 TSMIAGYVQN--GENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHART 440

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK G   +V +G+AL TMYAKCG+++    +F+ + +RDI+SWNAM+S  + +G GK AL
Sbjct: 441 IKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEAL 500

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            LFEEM+++   PDD++ + VL AC + GL + G   F  +   +GL P +EH+ACMVD+
Sbjct: 501 ELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDV 560

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           L RAG+L EA   I S+       LWR L+   +   N +    A ++L++L  +++ ++
Sbjct: 561 LSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAY 620

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           +L+S +Y   G  ++  +VR+ M    +SKE GCSWIE+ S +H FV   + HP   EI 
Sbjct: 621 VLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIR 680

Query: 731 SKLDLLNDEMK 741
           +++  L+ +MK
Sbjct: 681 TEILRLSKQMK 691



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 29/227 (12%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI-VGNALITMYAKCGSIDGAFQIFKG 524
           +F+ L+  +  Q  L +GR+LHA  IK   ++  I + N+LI  YAKC  +  A  +F  
Sbjct: 10  SFNSLVQFT-HQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDR 68

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALL--LFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           I ++D++SWN +++ Y+  G    + +  LF+ M+ +   P+  +  G+  A   S LS 
Sbjct: 69  IHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAA--SNLSS 126

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLL---------GRAGRLSEAMNLINSSPFSESP 633
                F +      ++      AC  D+           +AG L EA  + +  P   + 
Sbjct: 127 ---IFFGQQAHAVAIK-----MACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMP-ERNE 177

Query: 634 LLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
           + W T++S    + +A   F +     L+  E +D   F   S + A
Sbjct: 178 VTWATMISGYAIQRLAGEAFEVF---ELMRREEEDVNEFAFTSVLSA 221


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/664 (34%), Positives = 369/664 (55%), Gaps = 2/664 (0%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           K+G+ +H  +LK G   +T+  N L+ LY++      A+++F+ ML R  +++ SLI G 
Sbjct: 288 KVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGL 347

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
              G  +  L +   M     K +  T + +L ACS +   + G+Q H++AIK+G  +++
Sbjct: 348 SQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDI 407

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            +  +L+ +Y      + A   F     ++V   N M++ Y        +F +F  +   
Sbjct: 408 ILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQME 467

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
             EPN +T+ +++  C     V+ G+Q+H   +K G    + V + ++ MY K G  + A
Sbjct: 468 GIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHA 527

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            ++F  + E++++SWTA+I+GY +     +A+N F E  D GI  D+   A+ I  C+  
Sbjct: 528 LKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGI 587

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
             L  G Q+H  A   GY  D+ +G ALV +YA+ G ++ A    D    K    +N+++
Sbjct: 588 QALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLI 647

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           SGF +  +   E+ + LFSQ   AG E +  TF   +S +A+ A +  G+ +HA  IKTG
Sbjct: 648 SGFAQ--SGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTG 705

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           + ++  V N LIT+YAKCG+ID A + F  + +++ +SWNAML+ Y+ HG G  AL LFE
Sbjct: 706 HDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFE 765

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           +MK+ G  P+ ++ +GVL AC + GL + GI  F  + +++GL P  EH+AC+VDLLGR+
Sbjct: 766 DMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRS 825

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G LS A   +   P     ++ RTL+S   +  N      A+  LL+LEPKD+ +++L+S
Sbjct: 826 GLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLS 885

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           NMYA  G      + R  M D  + KE G SWIE+++ +H F A  + HP  ++IY  L 
Sbjct: 886 NMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLR 945

Query: 735 LLND 738
            LN+
Sbjct: 946 DLNE 949



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 183/581 (31%), Positives = 298/581 (51%), Gaps = 19/581 (3%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           + SG    G  +H  +LK G   +      L++LY  F  LD A  +FD M VR    W 
Sbjct: 79  LSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWN 138

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG--EQIHAFAI 186
            ++  ++       VLG+   M + + K +E T + +L  C    D  F   E+IHA  I
Sbjct: 139 KVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG-GGDVPFHCVEKIHARTI 197

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
             G+EN++FV   LI +YF +G    A+ VF GL  +D      M+   +++G  E A  
Sbjct: 198 THGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVL 257

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F  + +S   P  Y F++V+S C +    + G+QLHGL +K G   E  V NA+VT+Y 
Sbjct: 258 LFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYS 317

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           + G    AE++F+A+ +R+ +S+ +LISG  + G+  KA+  F +     +  D   +A+
Sbjct: 318 RLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVAS 377

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++  CS    L +G Q H +AIK G  SD+ L  AL+D+Y K  D+K+A         + 
Sbjct: 378 LLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETEN 437

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N +L  +   + D+  +   +F+Q ++ G+EP+  T+  +L   +S   +  G  +
Sbjct: 438 VVLWNVMLVAY--GLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQI 495

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H   +KTG+  +V V + LI MYAK G +D A +IF+ + ++D+VSW AM++ YA H   
Sbjct: 496 HTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKF 555

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPI 600
             AL LF+EM+ +G   D+I     + AC        GI   N+ +QI+      G    
Sbjct: 556 AEALNLFKEMQDQGIHSDNIGFASAISAC-------AGIQALNQGQQIHAQACVSGYSDD 608

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           L     +V L  R G++ +A    +   FS+  + W +L+S
Sbjct: 609 LSVGNALVSLYARCGKVRDAYFAFD-KIFSKDNISWNSLIS 648



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 252/495 (50%), Gaps = 8/495 (1%)

Query: 70  GSGDLKLG--QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
           G GD+     + +HA  +  G +N  F  N LI+LY K   L+ A+K+FDG+  R +++W
Sbjct: 180 GGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSW 239

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
            +++ G    G  E  + + C M+ S      +  S +L AC+ +E    GEQ+H   +K
Sbjct: 240 VAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLK 299

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            GF    +V  +L+++Y   G F  AE VF  +  +D    N +I   ++ G S+ A  +
Sbjct: 300 QGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALEL 359

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +     +P+  T  +++S C     +  GKQ H  A+K G+  +I +  A++ +Y K
Sbjct: 360 FKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVK 419

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
               + A   F +    N++ W  ++  Y    +  ++   F +    GI  +     ++
Sbjct: 420 CSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSI 479

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  CS    ++LG Q+H   +K G+  +V + + L+D+YAK G L  A  +      K  
Sbjct: 480 LRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDV 539

Query: 428 AEFNAILSGFM--EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
             + A+++G+   EK A    + + LF + +  G+  D + F+  +S  A    L +G+ 
Sbjct: 540 VSWTAMIAGYAQHEKFA----EALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQ 595

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +HA +  +GY+ D+ VGNAL+++YA+CG +  A+  F  I  +D +SWN+++S +A  G 
Sbjct: 596 IHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGH 655

Query: 546 GKGALLLFEEMKREG 560
            + AL LF +M + G
Sbjct: 656 CEEALSLFSQMSKAG 670



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 212/433 (48%), Gaps = 12/433 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++       + LG+ +H  +LK+G Q + + ++ LI++YAK  +LD A K+F  + 
Sbjct: 476 YPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK 535

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  ++WT++I GY     +   L +  +M       +    +  + AC+ ++    G+Q
Sbjct: 536 EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQ 595

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA A  SG+ +++ VG +L+S+Y   G  R+A   F  +  KD    N +I  + ++G 
Sbjct: 596 IHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGH 655

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  +F  +  +  E N +TF   +S       V+ GKQ+H + +K G   E  V N 
Sbjct: 656 CEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNV 715

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++T+Y K G  ++AER F  + E+N ISW A+++GY + GHG KA++ F +   LG+  +
Sbjct: 716 LITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPN 775

Query: 361 SSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    ++ G++        HG +        +VD+  + G L  AR  +
Sbjct: 776 HVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFV 835

Query: 420 DGFSCKYTAEF-NAILSG-FMEKIADDEEDVMVLFSQQRLAGMEP-DPVTF---SRLLSL 473
           +    +  A     +LS   + K  D  E     F+   L  +EP D  T+   S + ++
Sbjct: 836 EEMPIQPDAMVCRTLLSACIVHKNIDIGE-----FAASHLLELEPKDSATYVLLSNMYAV 890

Query: 474 SASQACLVRGRSL 486
           +    C  R R +
Sbjct: 891 TGKWGCRDRTRQM 903



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 198/427 (46%), Gaps = 20/427 (4%)

Query: 248 FVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           F+HL+       N  T+  ++  C  +    +G +LHG  +K G   E+ +   ++ +Y 
Sbjct: 55  FLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYI 114

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
             G  + A  +FD +  R L  W  ++  +V     G+ +  F   L   +  D    A 
Sbjct: 115 AFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAG 174

Query: 367 VIDGCSVCS-NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           V+ GC           ++H   I HGY + + +   L+D+Y K G L SA+ + DG   +
Sbjct: 175 VLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR 234

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
            +  + A+LSG  +  +  EE+ ++LF Q   +G+ P P  FS +LS          G  
Sbjct: 235 DSVSWVAMLSGLSQ--SGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQ 292

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           LH   +K G++ +  V NAL+T+Y++ G+   A Q+F  +  RD VS+N+++S  +  G 
Sbjct: 293 LHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGY 352

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP------ 599
              AL LF++M  +   PD +++  +L AC     S  G  L  +    Y ++       
Sbjct: 353 SDKALELFKKMCLDCLKPDCVTVASLLSAC-----SSVGALLVGKQFHSYAIKAGMSSDI 407

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM--ANSKFSILASK 657
           ILE    ++DL  +   +  A     S+  +E+ +LW  ++    L+   N  F I    
Sbjct: 408 ILE--GALLDLYVKCSDIKTAHEFFLSTE-TENVVLWNVMLVAYGLLDNLNESFKIFTQM 464

Query: 658 RLLDLEP 664
           ++  +EP
Sbjct: 465 QMEGIEP 471



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 147/327 (44%), Gaps = 27/327 (8%)

Query: 330 TALISGYVRSGHGGKAINGFLEFLD-LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           TAL   Y         IN FL  ++  G+  +S     ++DGC        G +LHG  +
Sbjct: 37  TALSYAYSNDEGEANGIN-FLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKIL 95

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME-KIADDEED 447
           K G+ ++V L   L+D+Y   GDL  A  + D    +  + +N +L  F+  K+A     
Sbjct: 96  KMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAG---R 152

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
           V+ LF +     ++PD  T++ +L               +HA +I  GY   + V N LI
Sbjct: 153 VLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLI 212

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            +Y K G ++ A ++F G+  RD VSW AMLS  +  G  + A+LLF +M   G  P   
Sbjct: 213 DLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPY 272

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI----LEHFAC--MVDLLGRAGRLSEA 620
               VL AC      + G       EQ++GL       LE + C  +V L  R G    A
Sbjct: 273 IFSSVLSACTKVEFYKVG-------EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPA 325

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMA 647
             + N+       +L R  VS + L++
Sbjct: 326 EQVFNA-------MLQRDEVSYNSLIS 345


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/664 (33%), Positives = 374/664 (56%), Gaps = 2/664 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +HA   K G  ++ F  N +I LY +     +A+++F  M  R  +T+ +LI G+  
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G  E  L I  +M  S    +  T S +L AC+ L D   G Q+H++  K+G  ++  +
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL+ +Y   G    A  +F      +V   N M++ + +  +   +F +F  + ++  
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN +T+  ++  C     ++ G+Q+H L+VK G   ++ V   ++ MY K+G  E+A R
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           + + + E++++SWT++I+GYV+      A+  F E    GI  D+  LA+ I GC+  + 
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           +  GLQ+H      GY  DV +  ALV++YA+ G ++ A    +    K    +N ++SG
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F +  +   E+ + +F +   +G++ +  TF   LS SA+ A + +G+ +HA  IKTG++
Sbjct: 522 FAQ--SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +  VGNALI++Y KCGS + A   F  +S+R+ VSWN ++++ + HG G  AL LF++M
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQM 639

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K+EG  P+D++ +GVL AC + GL E G+  F  +   YG+RP  +H+AC++D+ GRAG+
Sbjct: 640 KKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQ 699

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A   I   P +   ++WRTL+S  K+  N +    A+K LL+LEP D+ S++L+SN 
Sbjct: 700 LDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNA 759

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA         +VR  M D  + KE G SWIE+ + +H F    + HP +E+IY+ L ++
Sbjct: 760 YAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVI 819

Query: 737 NDEM 740
           ND +
Sbjct: 820 NDRV 823



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 254/495 (51%), Gaps = 2/495 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA  +  G        N LI+LY+K   +  A+++F+ +  R  ++W +++ GY  +G 
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E  LG+   M+R+      +  S +L +C+  E    G  IHA   K GF + +FVG +
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           +I++Y   G FR AE VF  + ++D    N +I  + + G  E A  +F  +  S   P+
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T +++++ C     +++G QLH    K G+  +  +  +++ +Y K G  E A  +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
           +    N++ W  ++  + +     K+   F +    GI  +      ++  C+    ++L
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G Q+H  ++K G+ SD+ +   L+D+Y+K G L+ AR +L+    K    + ++++G+++
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ 423

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
              +  +D +  F + +  G+ PD +  +  +S  A    + +G  +HA    +GY+ DV
Sbjct: 424 H--ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDV 481

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            + NAL+ +YA+CG I  AF  F+ I  +D ++WN ++S +A  GL + AL +F  M + 
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541

Query: 560 GFAPDDISILGVLQA 574
           G   +  + +  L A
Sbjct: 542 GVKHNVFTFVSALSA 556



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 249/524 (47%), Gaps = 5/524 (0%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI-F 177
           M  R A +    + G+L   D   VL +  D  R          +  L AC     R   
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             +IHA A+  G      VG  LI +Y  +G    A  VF  L+ +D      M+  Y +
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  ++  +  +   P  Y  ++V+S C +     +G+ +H    K G   EI V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA++T+Y + G    AER+F  +  R+ +++  LISG+ + GHG  A+  F E    G+
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   +++++  C+   +L+ G QLH +  K G  SD  +  +L+D+Y K GD+++A +
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +         +N +L  F +   +D      LF Q + AG+ P+  T+  +L      
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQ--INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +  G  +H+ S+KTG+ +D+ V   LI MY+K G ++ A ++ + + ++D+VSW +M+
Sbjct: 359 REIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMI 418

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y  H   K AL  F+EM++ G  PD+I +   +  C        G+ +   I  + G 
Sbjct: 419 AGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI-YVSGY 477

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
              +  +  +V+L  R GR+ EA +        +  + W  LVS
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDE-ITWNGLVS 520



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 220/474 (46%), Gaps = 4/474 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+ G  +H++L K+G  +D     +L++LY K   ++ A  +F+     + + W  ++
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             +    D      + C M  +  + N+ T   IL  C+   +   GEQIH+ ++K+GFE
Sbjct: 318 VAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++++V   LI MY   G   +A  V   L  KDV     MI  Y +    + A   F  +
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM 437

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P++    + IS C     + +G Q+H      G   ++S+ NA+V +Y + G  
Sbjct: 438 QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRI 497

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            EA   F+ I  ++ I+W  L+SG+ +SG   +A+  F+     G+  +     + +   
Sbjct: 498 REAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSAS 557

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  + ++ G Q+H   IK G+  +  +G AL+ +Y K G  + A+M     S +    +N
Sbjct: 558 ANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYS 490
            I++   +     E   + LF Q +  G++P+ VTF  +L+  +    +  G S   + S
Sbjct: 618 TIITSCSQHGRGLE--ALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMS 675

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            + G          +I ++ + G +D A +  + +    D + W  +LSA  +H
Sbjct: 676 DEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH 729



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++    + ++ LG+ +H+  +K+G ++D + +  LI++Y+K+  L+ A+++ + + 
Sbjct: 348 YPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK 407

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  ++WTS+I GY+     +  L    +M +     +    +  +  C+ +     G Q
Sbjct: 408 EKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ 467

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA    SG+  +V +  +L+++Y   G  REA + F  + +KD    N ++  + ++G 
Sbjct: 468 IHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGL 527

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VF+ +  S  + N +TF + +S       +++GKQ+H   +K G   E  VGNA
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++++YGK G  E+A+  F  +SERN +SW  +I+   + G G +A++ F +    GI  +
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647

Query: 361 SSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    +E GL      + ++G          ++DI+ + G L  A+  +
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707

Query: 420 D 420
           +
Sbjct: 708 E 708



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 165/383 (43%), Gaps = 46/383 (12%)

Query: 15  KSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKIS------ 68
           K+++ L  LK+K  + +++      V + C   +++  +       WP  + ++      
Sbjct: 398 KARRVLEMLKEK-DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC 456

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
            G   ++ G  +HA +  SG   D    N L+NLYA+  R+  A   F+ +  +  ITW 
Sbjct: 457 AGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWN 516

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
            L+ G+   G +E  L +   M +S  K N  T    L A + L +   G+QIHA  IK+
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G      VG +LIS+Y   G F +A+  F  ++ ++    N +I   ++ G    A  +F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGK 307
             +     +PND TF  V++ C     VEEG      ++ ++G+         ++ ++G+
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G  + A++                                F+E  ++ I  D+    T+
Sbjct: 697 AGQLDRAKK--------------------------------FIE--EMPIAADAMVWRTL 722

Query: 368 IDGCSVCSNLELGLQLHGFAIKH 390
           +  C V  N+E+G     FA KH
Sbjct: 723 LSACKVHKNIEVG----EFAAKH 741


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/664 (33%), Positives = 374/664 (56%), Gaps = 2/664 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +HA   K G  ++ F  N +I LY +     +A+++F  M  R  +T+ +LI G+  
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G  E  L I  +M  S    +  T S +L AC+ L D   G Q+H++  K+G  ++  +
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL+ +Y   G    A  +F      +V   N M++ + +  +   +F +F  + ++  
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN +T+  ++  C     ++ G+Q+H L+VK G   ++ V   ++ MY K+G  E+A R
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           + + + E++++SWT++I+GYV+      A+  F E    GI  D+  LA+ I GC+  + 
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           +  GLQ+H      GY  DV +  ALV++YA+ G ++ A    +    K    +N ++SG
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F +  +   E+ + +F +   +G++ +  TF   LS SA+ A + +G+ +HA  IKTG++
Sbjct: 522 FAQ--SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +  VGNALI++Y KCGS + A   F  +S+R+ VSWN ++++ + HG G  AL LF++M
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQM 639

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K+EG  P+D++ +GVL AC + GL E G+  F  +   YG+RP  +H+AC++D+ GRAG+
Sbjct: 640 KKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQ 699

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A   I   P +   ++WRTL+S  K+  N +    A+K LL+LEP D+ S++L+SN 
Sbjct: 700 LDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNA 759

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA         +VR  M D  + KE G SWIE+ + +H F    + HP +E+IY+ L ++
Sbjct: 760 YAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVI 819

Query: 737 NDEM 740
           ND +
Sbjct: 820 NDRV 823



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 254/495 (51%), Gaps = 2/495 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA  +  G        N LI+LY+K   +  A+++F+ +  R  ++W +++ GY  +G 
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E  LG+   M+R+      +  S +L +C+  E    G  IHA   K GF + +FVG +
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           +I++Y   G FR AE VF  + ++D    N +I  + + G  E A  +F  +  S   P+
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T +++++ C     +++G QLH    K G+  +  +  +++ +Y K G  E A  +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
           +    N++ W  ++  + +     K+   F +    GI  +      ++  C+    ++L
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G Q+H  ++K G+ SD+ +   L+D+Y+K G L+ AR +L+    K    + ++++G+++
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ 423

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
              +  +D +  F + +  G+ PD +  +  +S  A    + +G  +HA    +GY+ DV
Sbjct: 424 H--ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDV 481

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            + NAL+ +YA+CG I  AF  F+ I  +D ++WN ++S +A  GL + AL +F  M + 
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541

Query: 560 GFAPDDISILGVLQA 574
           G   +  + +  L A
Sbjct: 542 GVKHNVFTFVSALSA 556



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 249/524 (47%), Gaps = 5/524 (0%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI-F 177
           M  R A +    + G+L   D   VL +  D  R          +  L AC     R   
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             +IHA A+  G      VG  LI +Y  +G    A  VF  L+ +D      M+  Y +
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  ++  +  +   P  Y  ++V+S C +     +G+ +H    K G   EI V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA++T+Y + G    AER+F  +  R+ +++  LISG+ + GHG  A+  F E    G+
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   +++++  C+   +L+ G QLH +  K G  SD  +  +L+D+Y K GD+++A +
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +         +N +L  F +   +D      LF Q + AG+ P+  T+  +L      
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQ--INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +  G  +H+ S+KTG+ +D+ V   LI MY+K G ++ A ++ + + ++D+VSW +M+
Sbjct: 359 REIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMI 418

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y  H   K AL  F+EM++ G  PD+I +   +  C        G+ +   I  + G 
Sbjct: 419 AGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI-YVSGY 477

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
              +  +  +V+L  R GR+ EA +        +  + W  LVS
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDE-ITWNGLVS 520



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 220/474 (46%), Gaps = 4/474 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+ G  +H++L K+G  +D     +L++LY K   ++ A  +F+     + + W  ++
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             +    D      + C M  +  + N+ T   IL  C+   +   GEQIH+ ++K+GFE
Sbjct: 318 VAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++++V   LI MY   G   +A  V   L  KDV     MI  Y +    + A   F  +
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM 437

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P++    + IS C     + +G Q+H      G   ++S+ NA+V +Y + G  
Sbjct: 438 QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRI 497

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            EA   F+ I  ++ I+W  L+SG+ +SG   +A+  F+     G+  +     + +   
Sbjct: 498 REAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSAS 557

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  + ++ G Q+H   IK G+  +  +G AL+ +Y K G  + A+M     S +    +N
Sbjct: 558 ANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYS 490
            I++   +     E   + LF Q +  G++P+ VTF  +L+  +    +  G S   + S
Sbjct: 618 TIITSCSQHGRGLE--ALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMS 675

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            + G          +I ++ + G +D A +  + +    D + W  +LSA  +H
Sbjct: 676 DEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH 729



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++    + ++ LG+ +H+  +K+G ++D + +  LI++Y+K+  L+ A+++ + + 
Sbjct: 348 YPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK 407

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  ++WTS+I GY+     +  L    +M +     +    +  +  C+ +     G Q
Sbjct: 408 EKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ 467

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA    SG+  +V +  +L+++Y   G  REA + F  + +KD    N ++  + ++G 
Sbjct: 468 IHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGL 527

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VF+ +  S  + N +TF + +S       +++GKQ+H   +K G   E  VGNA
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++++YGK G  E+A+  F  +SERN +SW  +I+   + G G +A++ F +    GI  +
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647

Query: 361 SSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    +E GL      + ++G          ++DI+ + G L  A+  +
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707

Query: 420 D 420
           +
Sbjct: 708 E 708



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 165/383 (43%), Gaps = 46/383 (12%)

Query: 15  KSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKIS------ 68
           K+++ L  LK+K  + +++      V + C   +++  +       WP  + ++      
Sbjct: 398 KARRVLEMLKEK-DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC 456

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
            G   ++ G  +HA +  SG   D    N L+NLYA+  R+  A   F+ +  +  ITW 
Sbjct: 457 AGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWN 516

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
            L+ G+   G +E  L +   M +S  K N  T    L A + L +   G+QIHA  IK+
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G      VG +LIS+Y   G F +A+  F  ++ ++    N +I   ++ G    A  +F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGK 307
             +     +PND TF  V++ C     VEEG      ++ ++G+         ++ ++G+
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G  + A++                                F+E  ++ I  D+    T+
Sbjct: 697 AGQLDRAKK--------------------------------FIE--EMPIAADAMVWRTL 722

Query: 368 IDGCSVCSNLELGLQLHGFAIKH 390
           +  C V  N+E+G     FA KH
Sbjct: 723 LSACKVHKNIEVG----EFAAKH 741


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 242/707 (34%), Positives = 378/707 (53%), Gaps = 19/707 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANN-------LINLYAKFNRLDVAQKLF 116
           L++  I S  L  G+ +H  LLK   +       N       L++LY   + L +A+ +F
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74

Query: 117 DGMLVR--SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED 174
           D M  R  + + W  LI+ Y  +G YE  + +   M       N  T   +L+ACS L++
Sbjct: 75  DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134

Query: 175 RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
              G +IH    +   E+NV+V T+L+  Y   GC  +A+ VF  +  +DV   N MI  
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194

Query: 235 YN-KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
           ++   G  +    + V +  +D  PN  T   V+    +   +  GK++HG  V+ G V 
Sbjct: 195 FSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVG 253

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEF 352
           ++ VG  I+ +YGK    + A R+FD +   +N ++W+A++  YV      +A+  F + 
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL 313

Query: 353 LDLG---ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
           L L    I   +  LATVI  C+  ++L  G  LH +AIK G++ D+ +G  L+ +YAK 
Sbjct: 314 LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKC 373

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G +  A    +    +    F AI+SG+++    + E+ + +F + +L+G+ P+  T + 
Sbjct: 374 GIINGAMRFFNEMDLRDAVSFTAIISGYVQN--GNSEEGLRMFLEMQLSGINPEKATLAS 431

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +L   A  A L  G   H Y+I  G+ AD ++ NALI MYAKCG ID A ++F  +  R 
Sbjct: 432 VLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRG 491

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           IVSWN M+ AY +HG+G  ALLLF+ M+ EG  PDD++ + ++ AC +SGL   G   FN
Sbjct: 492 IVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFN 551

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            + Q +G+ P +EH+ACMVDLL RAG   E  + I   P      +W  L+S  ++  N 
Sbjct: 552 AMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNV 611

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +     SK++  L P+  G+F+L+SNMY+  G  D+AA+VR T  +    K  GCSWIEI
Sbjct: 612 ELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEI 671

Query: 710 DSKLHHFVASG-KDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
              +H F+  G + HP+  +I +KLD L  EMK L  +  S++  QD
Sbjct: 672 SGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQD 718



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 241/502 (48%), Gaps = 37/502 (7%)

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIK-------SGFENNVFVGTSLISMYFHSGCFREAE 214
           C+V+LE+C   +    G+ IH   +K       +   N       L+ +Y      + A 
Sbjct: 12  CTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIAR 71

Query: 215 NVFRGLAY--KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           +VF  + +  K+V   N +I  Y   G  E A  ++  +L     PN +TF  V+  C  
Sbjct: 72  HVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSA 131

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
                EG+++H    +  +   + V  A+V  Y K G  ++A+ +FD + +R++++W ++
Sbjct: 132 LKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSM 191

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           ISG+         +   L  +   +  +SS +  V+   +  ++L  G ++HGF ++ G+
Sbjct: 192 ISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGF 251

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAILSGFMEKIADDEEDVMVL 451
           + DV +GT ++D+Y K   +  AR + D     K    ++A++  ++  + D   + + L
Sbjct: 252 VGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYV--VCDFMREALEL 309

Query: 452 FSQQRLAGMEPD-----PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
           F Q  L  ++ D      VT + ++ + A+   L  G  LH Y+IK+G+  D++VGN L+
Sbjct: 310 FCQ--LLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLL 367

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
           +MYAKCG I+GA + F  +  RD VS+ A++S Y  +G  +  L +F EM+  G  P+  
Sbjct: 368 SMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKA 427

Query: 567 SILGVLQACIY-SGLSEGG-------ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS 618
           ++  VL AC + +GL  G        IC F     I            ++D+  + G++ 
Sbjct: 428 TLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICN---------ALIDMYAKCGKID 478

Query: 619 EAMNLINSSPFSESPLLWRTLV 640
            A  + +        + W T++
Sbjct: 479 TARKVFDRM-HKRGIVSWNTMI 499



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 242/499 (48%), Gaps = 13/499 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      +   G+ +H  + +   +++ + +  L++ YAK   LD A+++FD M 
Sbjct: 122 FPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMH 181

Query: 121 VRSAITWTSLIKGY-LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            R  + W S+I G+ L +G Y+ V  +   M +++   N  T   +L A + +     G+
Sbjct: 182 KRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGK 240

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKA 238
           +IH F ++ GF  +V VGT ++ +Y    C   A  +F  +   K+    + M+  Y   
Sbjct: 241 EIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVC 300

Query: 239 GESEMAFHVFVHLL---SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
                A  +F  LL         +  T   VI VC     +  G  LH  A+K G V ++
Sbjct: 301 DFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDL 360

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VGN +++MY K G+   A R F+ +  R+ +S+TA+ISGYV++G+  + +  FLE    
Sbjct: 361 MVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLS 420

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           GI  + + LA+V+  C+  + L  G   H +AI  G+ +D  +  AL+D+YAK G + +A
Sbjct: 421 GINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTA 480

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R + D    +    +N ++  +   I     + ++LF   +  G++PD VTF  L+S  +
Sbjct: 481 RKVFDRMHKRGIVSWNTMIIAY--GIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACS 538

Query: 476 SQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSW 533
               +  G+   +A +   G    +     ++ + ++ G         + +  + D+  W
Sbjct: 539 HSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVW 598

Query: 534 NAMLSAYALHG---LGKGA 549
            A+LSA  ++    LG+G 
Sbjct: 599 GALLSACRVYKNVELGEGV 617


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/682 (31%), Positives = 369/682 (54%), Gaps = 2/682 (0%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           D+ +L++  + + DL +G+ VH  +L+ G + + +  N L+ LY     ++ A++LFD  
Sbjct: 46  DYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKF 105

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             +S ++W  +I GY   G  +    +   M +   + ++ T   IL ACS      +G 
Sbjct: 106 SNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGR 165

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           ++H   +++G  NN  VG +LISMY   G  R+A  VF  +A +D      +   Y ++G
Sbjct: 166 EVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESG 225

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
            ++ +   +  +L     P+  T+ NV+S C     +E+GKQ+H   V+     ++ V  
Sbjct: 226 YAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVST 285

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+  MY K G  ++A  +F+ +  R++I+W  +I G V SG   +A   F   L   +  
Sbjct: 286 ALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAP 345

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D      ++  C+    L  G ++H  A+K G +SDVR G AL+++Y+K G +K AR + 
Sbjct: 346 DRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVF 405

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    +    + A++ G+ +       +    F +    G+E + +T+  +L   ++   
Sbjct: 406 DRMPKRDVVSWTALVGGYAD--CGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVA 463

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  G+ +HA  +K G  AD+ V NAL++MY KCGS++ A ++ +G+S RD+V+WN ++  
Sbjct: 464 LKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGG 523

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
            A +G G  AL  FE MK E   P+  + + V+ AC    L E G   F  + + YG+ P
Sbjct: 524 LAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVP 583

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             +H+ACMVD+L RAG L EA ++I + PF  S  +W  L++  +   N +    A+++ 
Sbjct: 584 TEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQC 643

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           L LEP++AG+++ +S +YA  GM  + AK+R  M +  + KE G SWIE+  ++H FVA 
Sbjct: 644 LKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAG 703

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
            + HP +EEIYS+L+ L  ++K
Sbjct: 704 DQSHPRTEEIYSELEALTKQIK 725



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 194/397 (48%), Gaps = 10/397 (2%)

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           V  +L     + + Y +  ++  C +   +  GKQ+H   ++FG+   + + N ++ +Y 
Sbjct: 31  VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
             G   EA R+FD  S ++++SW  +ISGY   G G +A N F      G+  D     +
Sbjct: 91  HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++  CS  + L  G ++H   ++ G  ++  +G AL+ +YAK G ++ AR + D  + + 
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRD 210

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +  +   + E  +   ++ +  +      G+ P  +T+  +LS   S A L +G+ +
Sbjct: 211 EVSWTTLTGAYAE--SGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQI 268

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HA  +++ + +DV V  AL  MY KCG++  A ++F+ + +RD+++WN M+      G  
Sbjct: 269 HAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQL 328

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY---GLRPILEH 603
           + A  +F  M +E  APD ++ L +L AC       GG+    EI       GL   +  
Sbjct: 329 EEAHGMFHRMLKECVAPDRVTYLAILSACA----RPGGLACGKEIHARAVKDGLVSDVRF 384

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
              ++++  +AG + +A  + +  P     + W  LV
Sbjct: 385 GNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALV 420


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/664 (33%), Positives = 373/664 (56%), Gaps = 2/664 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +HA   K G  ++ F  N +I LY +     +A+++F  M  R  +T+ +LI G+  
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G  E  L I  +M  S    +  T S +L AC+ L D   G Q+H++  K+G  ++  +
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL+ +Y   G    A  +F      +V   N M++ + +  +   +F +F  + ++  
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN +T+  ++  C     ++ G+Q+H L+VK G   ++ V   ++ MY K+G  E+A R
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           + + + E++++SWT++I+GYV+      A+  F E    GI  D+  LA+ I GC+  + 
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           +  GLQ+H      GY  DV +  ALV++YA+ G ++ A    +    K     N ++SG
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSG 521

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F +  +   E+ + +F +   +G++ +  TF   LS SA+ A + +G+ +HA  IKTG++
Sbjct: 522 FAQ--SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +  VGNALI++Y KCGS + A   F  +S+R+ VSWN ++++ + HG G  AL LF++M
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQM 639

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K+EG  P+D++ +GVL AC + GL E G+  F  +   YG+RP  +H+AC++D+ GRAG+
Sbjct: 640 KKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQ 699

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A   I   P +   ++WRTL+S  K+  N +    A+K LL+LEP D+ S++L+SN 
Sbjct: 700 LDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNA 759

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA         +VR  M D  + KE G SWIE+ + +H F    + HP +E+IY+ L ++
Sbjct: 760 YAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVI 819

Query: 737 NDEM 740
           ND +
Sbjct: 820 NDRV 823



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 253/495 (51%), Gaps = 2/495 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA  +  G        N LI+LY+K   +  A+++F+ +  R  ++W +++ GY  +G 
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E  LG+   M+R+      +  S +L +C+  E    G  IHA   K GF + +FVG +
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           +I++Y   G FR AE VF  + ++D    N +I  + + G  E A  +F  +  S   P+
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T +++++ C     +++G QLH    K G+  +  +  +++ +Y K G  E A  +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
           +    N++ W  ++  + +     K+   F +    GI  +      ++  C+    ++L
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G Q+H  ++K G+ SD+ +   L+D+Y+K G L+ AR +L+    K    + ++++G+++
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ 423

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
              +  +D +  F + +  G+ PD +  +  +S  A    + +G  +HA    +GY+ DV
Sbjct: 424 H--ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDV 481

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            + NAL+ +YA+CG I  AF  F+ +  +D ++ N ++S +A  GL + AL +F  M + 
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQS 541

Query: 560 GFAPDDISILGVLQA 574
           G   +  + +  L A
Sbjct: 542 GVKHNVFTFVSALSA 556



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 243/505 (48%), Gaps = 4/505 (0%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI-F 177
           M  R A +    + G+L   D   VL +  D  R          +  L AC     R   
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             +IHA A+  G      VG  LI +Y  +G    A  VF  L+ +D      M+  Y +
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  ++  +  +   P  Y  ++V+S C +     +G+ +H    K G   EI V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA++T+Y + G    AER+F  +  R+ +++  LISG+ + GHG  A+  F E    G+
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   +++++  C+   +L+ G QLH +  K G  SD  +  +L+D+Y K GD+++A +
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +         +N +L  F +   +D      LF Q + AG+ P+  T+  +L      
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQ--INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +  G  +H+ S+KTG+ +D+ V   LI MY+K G ++ A ++ + + ++D+VSW +M+
Sbjct: 359 REIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMI 418

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y  H   K AL  F+EM++ G  PD+I +   +  C        G+ +   I  + G 
Sbjct: 419 AGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI-YVSGY 477

Query: 598 RPILEHFACMVDLLGRAGRLSEAMN 622
              +  +  +V+L  R GR+ EA +
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFS 502



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 219/474 (46%), Gaps = 4/474 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+ G  +H++L K+G  +D     +L++LY K   ++ A  +F+     + + W  ++
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             +    D      + C M  +  + N+ T   IL  C+   +   GEQIH+ ++K+GFE
Sbjct: 318 VAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++++V   LI MY   G   +A  V   L  KDV     MI  Y +    + A   F  +
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM 437

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P++    + IS C     + +G Q+H      G   ++S+ NA+V +Y + G  
Sbjct: 438 QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRI 497

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            EA   F+ +  ++ I+   L+SG+ +SG   +A+  F+     G+  +     + +   
Sbjct: 498 REAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSAS 557

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  + ++ G Q+H   IK G+  +  +G AL+ +Y K G  + A+M     S +    +N
Sbjct: 558 ANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYS 490
            I++   +     E   + LF Q +  G++P+ VTF  +L+  +    +  G S   + S
Sbjct: 618 TIITSCSQHGRGLE--ALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMS 675

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            + G          +I ++ + G +D A +  + +    D + W  +LSA  +H
Sbjct: 676 DEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH 729



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 185/361 (51%), Gaps = 1/361 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++    + ++ LG+ +H+  +K+G ++D + +  LI++Y+K+  L+ A+++ + + 
Sbjct: 348 YPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK 407

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  ++WTS+I GY+     +  L    +M +     +    +  +  C+ +     G Q
Sbjct: 408 EKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ 467

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA    SG+  +V +  +L+++Y   G  REA + F  +  KD    N ++  + ++G 
Sbjct: 468 IHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGL 527

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VF+ +  S  + N +TF + +S       +++GKQ+H   +K G   E  VGNA
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++++YGK G  E+A+  F  +SERN +SW  +I+   + G G +A++ F +    GI  +
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647

Query: 361 SSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    +E GL      + ++G          ++DI+ + G L  A+  +
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707

Query: 420 D 420
           +
Sbjct: 708 E 708



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 165/383 (43%), Gaps = 46/383 (12%)

Query: 15  KSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKIS------ 68
           K+++ L  LK+K  + +++      V + C   +++  +       WP  + ++      
Sbjct: 398 KARRVLEMLKEK-DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC 456

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
            G   ++ G  +HA +  SG   D    N L+NLYA+  R+  A   F+ M ++  IT  
Sbjct: 457 AGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGN 516

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
            L+ G+   G +E  L +   M +S  K N  T    L A + L +   G+QIHA  IK+
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G      VG +LIS+Y   G F +A+  F  ++ ++    N +I   ++ G    A  +F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGK 307
             +     +PND TF  V++ C     VEEG      ++ ++G+         ++ ++G+
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G  + A++                                F+E  ++ I  D+    T+
Sbjct: 697 AGQLDRAKK--------------------------------FIE--EMPIAADAMVWRTL 722

Query: 368 IDGCSVCSNLELGLQLHGFAIKH 390
           +  C V  N+E+G     FA KH
Sbjct: 723 LSACKVHKNIEVG----EFAAKH 741


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/691 (33%), Positives = 384/691 (55%), Gaps = 17/691 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LV 121
           L+K  I SG+L+LG+ +H  L+ SG   D+   N+LI LY+K    + A  +F  M    
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF---NEHTCSVILEACSLLEDRIFG 178
           R  ++W+++I  + ++      L     M +        NE+  + +L +CS       G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 179 EQIHAFAIKSG-FENNVFVGTSLISMYFHSGC-FREAENVFRGLAYKDVRCVNFMILEYN 236
             I AF +K+G F+++V VG +LI M+   G   + A  VF  + +K++     MI  Y+
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           + G  + A  +F  LL S++ P+ +T T+++S C E      GKQLH   ++ G+  ++ 
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           VG  +V MY K    E + ++F+ +   N++SWTALISGYV+S    +AI  F   L   
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  +    ++V+  C+   +  +G QLHG  IK G  +   +G +L+++YA+ G ++ AR
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ-RLAGMEPDPVTFSRLLSLSA 475
              +    K    +N       + +  DE      F+ +    G+   P T++ LLS +A
Sbjct: 405 KAFNILFEKNLISYNTAADANAKALDSDES-----FNHEVEHTGVGASPFTYACLLSGAA 459

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
               +V+G  +HA  +K+G+  ++ + NALI+MY+KCG+ + A Q+F  +  R++++W +
Sbjct: 460 CIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTS 519

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ++S +A HG    AL LF EM   G  P++++ + VL AC + GL +     FN +   +
Sbjct: 520 IISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNH 579

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            + P +EH+ACMVDLLGR+G L EA+  INS PF    L+WRT +   ++  N+K    A
Sbjct: 580 SISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHA 639

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           +K++L+ EP D  ++IL+SN+YA +G  D+ A +R +M   +L KE G SWIE+D+++H 
Sbjct: 640 AKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHK 699

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKLKVKD 746
           F      HP++ +IY +L    DE+ LK+K+
Sbjct: 700 FHVGDTSHPQARKIYDEL----DELALKIKN 726



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 193/386 (50%), Gaps = 9/386 (2%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           S++L+AC    +   G+ +H   I SG   +  +  SLI++Y   G +  A ++FR + +
Sbjct: 43  SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102

Query: 223 --KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD---FEPNDYTFTNVISVCYENLGVE 277
             +D+   + +I  +        A   F+H+L        PN+Y FT ++  C   L   
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162

Query: 278 EGKQLHGLAVKFGVV-REISVGNAIVTMYGKHGMSEEAERM-FDAISERNLISWTALISG 335
            G  +    +K G     + VG A++ M+ K G+  ++ RM FD +  +NL++WT +I+ 
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           Y + G    A++ F   L      D   L +++  C       LG QLH + I+ G  SD
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           V +G  LVD+YAK   ++++R + +         + A++SG+++  +  E++ + LF   
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQ--SRQEQEAIKLFCNM 340

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
               + P+  TFS +L   AS      G+ LH  +IK G +    VGN+LI MYA+ G++
Sbjct: 341 LHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTM 400

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYA 541
           + A + F  + +++++S+N    A A
Sbjct: 401 ECARKAFNILFEKNLISYNTAADANA 426



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVR------GRSLHAYSIKTGYAADVIVGNAL 505
           F   R A    D  T S L+  S      +R      G+ LH   I +G   D ++ N+L
Sbjct: 21  FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSL 80

Query: 506 ITMYAKCGSIDGAFQIFK--GISDRDIVSWNAMLSAYALHGLGKGALLLFEEM---KREG 560
           IT+Y+KCG  + A  IF+  G   RD+VSW+A++S +A + +   ALL F  M    R  
Sbjct: 81  ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNI 140

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLF 588
             P++     +L++C        G+ +F
Sbjct: 141 IYPNEYCFTALLRSCSNPLFFTTGLAIF 168


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/676 (32%), Positives = 384/676 (56%), Gaps = 8/676 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           G+ +L+LG+ VH + L++G   ++   A  LI  Y +F+ + V   LFD M+VR+ ++W 
Sbjct: 166 GASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWN 224

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++I GY D GDY   L +   M   E KF+  T  V ++AC+ L     G+QIH  AIK 
Sbjct: 225 AMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKF 284

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            F  ++++  +L++MY ++G    +  +F  +  +D    N MI  Y   G  E A  +F
Sbjct: 285 EFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLF 344

Query: 249 VHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           + + S   + ++ T   ++S+C E   G+ +GK LH   +K G+  + S+GNA+++MY +
Sbjct: 345 IRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTE 404

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
               E  +++FD +   ++ISW  +I    R+    +A   F    +  I  +S  + ++
Sbjct: 405 LNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISI 464

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C   + L+ G  +HG+ +KH    +  L TAL D+Y   GD  +AR L +G   +  
Sbjct: 465 LAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDL 524

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +NA+++ +   + +++    +L   + ++  EP+ VT   +LS     A L +G+SLH
Sbjct: 525 ISWNAMIASY---VKNNQAHKALLLFHRMISEAEPNSVTIINVLSSFTHLATLPQGQSLH 581

Query: 488 AYSIKTGYAA--DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           AY  + G++   D+ + NA ITMYA+CGS+  A  IFK +  R+I+SWNAM++ Y ++G 
Sbjct: 582 AYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGR 641

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G  A+L F +M  +GF P+ ++ + VL AC +SG  E G+ LF+ + Q + + P L H++
Sbjct: 642 GSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYS 701

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           C+VDLL R G + EA   I+S P      +WR L+S  +  +++K +    ++L  LEP 
Sbjct: 702 CIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPM 761

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           +AG+++L+SN+YA  G+  E  ++RT + +  L K  G SWI + +++H F A  + HP+
Sbjct: 762 NAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQ 821

Query: 726 SEEIYSKLDLLNDEMK 741
           S++IY+KL +L   M+
Sbjct: 822 SDKIYAKLSILLSSMR 837



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 150/603 (24%), Positives = 279/603 (46%), Gaps = 8/603 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K       ++ G+++H  +  +   +D      +++ Y K   ++ A+ +FD M  
Sbjct: 57  PLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSD 116

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  + W +++ GY+  G YE  + +  +M R   + N  T   +L AC    +   G  +
Sbjct: 117 RDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGV 176

Query: 182 HAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           H + +++G F++N  V T+LI  Y      R    +F  +  +++   N MI  Y   G+
Sbjct: 177 HGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGD 235

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A  +FV +L  + + +  T    +  C E   ++ GKQ+H LA+KF  V ++ + NA
Sbjct: 236 YFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNA 295

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY  +G  E + ++F+++  R+   W ++IS Y   G   +A++ F+     G+  D
Sbjct: 296 LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKD 355

Query: 361 SSCLATVIDGC-SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
              +  ++  C  + S L  G  LH   IK G   D  LG AL+ +Y +   ++S + + 
Sbjct: 356 ERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIF 415

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D         +N ++                LF + R + ++P+  T   +L+      C
Sbjct: 416 DRMKGVDIISWNTMILALARNTL--RAQACELFERMRESEIKPNSYTIISILAACEDVTC 473

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  GRS+H Y +K     +  +  AL  MY  CG    A  +F+G  DRD++SWNAM+++
Sbjct: 474 LDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIAS 533

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI-YGLR 598
           Y  +     ALLLF  M  E   P+ ++I+ VL +  +      G  L   + +  + L 
Sbjct: 534 YVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLG 592

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
             L      + +  R G L  A N+  + P   + + W  +++   +      ++LA  +
Sbjct: 593 LDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAGYGMNGRGSDAMLAFSQ 651

Query: 659 LLD 661
           +L+
Sbjct: 652 MLE 654



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 222/451 (49%), Gaps = 5/451 (1%)

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W S+IK   +  + +++L     M       N  T  ++L+AC+       G+ IH    
Sbjct: 21  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
            +   ++V VGT+++  Y   G   +A  VF  ++ +DV   N M+  Y   G  E A  
Sbjct: 81  GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMY 305
           +   +   +  PN  T   ++  C     +  G+ +HG  ++ G+      V  A++  Y
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 200

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            +  M      +FD +  RN++SW A+ISGY   G   KA+  F++ L   +  D   + 
Sbjct: 201 LRFDM-RVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 259

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
             +  C+   +L+LG Q+H  AIK  ++ D+ +  AL+++Y+  G L+S+  L +    +
Sbjct: 260 VAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR 319

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC-LVRGR 484
               +N+++S +        E+ M LF + +  G++ D  T   +LS+    A  L++G+
Sbjct: 320 DAPLWNSMISAY--AAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGK 377

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
           SLHA+ IK+G   D  +GNAL++MY +   ++   +IF  +   DI+SWN M+ A A + 
Sbjct: 378 SLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNT 437

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           L   A  LFE M+     P+  +I+ +L AC
Sbjct: 438 LRAQACELFERMRESEIKPNSYTIISILAAC 468



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 185/369 (50%), Gaps = 16/369 (4%)

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           KD +  N +I         +     +  + S    PN+ T   V+  C     VE GK +
Sbjct: 16  KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 75

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H       ++ ++ VG A+V  Y K G  E+A  +FDA+S+R+++ W A++ GYV  G  
Sbjct: 76  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 135

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTA 401
            +A+    E     +  +S  +  ++  C   S L LG  +HG+ +++G   S+  + TA
Sbjct: 136 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 195

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L+  Y +  D++   +L D    +    +NA++SG+ +    D    + LF Q     M 
Sbjct: 196 LIGFYLR-FDMRVLPLLFDLMVVRNIVSWNAMISGYYD--VGDYFKALELFVQ-----ML 247

Query: 462 PDPVTFSRLLSLSASQAC-----LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
            D V F  +  L A QAC     L  G+ +H  +IK  +  D+ + NAL+ MY+  GS++
Sbjct: 248 VDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLE 307

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC- 575
            + Q+F+ + +RD   WN+M+SAYA  G  + A+ LF  M+ EG   D+ +++ +L  C 
Sbjct: 308 SSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCE 367

Query: 576 -IYSGLSEG 583
            + SGL +G
Sbjct: 368 ELASGLLKG 376



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 5/151 (3%)

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
           +++ ++  ++Q    G+ P+  T   +L   A+Q  + RG+S+H     T    DV VG 
Sbjct: 33  NDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGT 92

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           A++  Y KCG ++ A  +F  +SDRD+V WNAM+  Y   G  + A+LL  EM RE   P
Sbjct: 93  AVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRP 152

Query: 564 DDISILGVLQAC-----IYSGLSEGGICLFN 589
           +  +++ +L AC     +  G    G CL N
Sbjct: 153 NSRTMVALLLACEGASELRLGRGVHGYCLRN 183


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/691 (33%), Positives = 379/691 (54%), Gaps = 11/691 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L  G+AVH  ++++G+      AN L+N YAK  +L  A  +F+ ++ +  ++W SLI 
Sbjct: 29  NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88

Query: 133 GYLDDGDYES---VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           GY  +G   S   V+ +  +M   +   N +T + I +A S L+    G Q HA  +K  
Sbjct: 89  GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
              +++V TSL+ MY  +G   +   VF  +  ++    + M+  Y   G  E A  VF 
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208

Query: 250 HLLSSDFE--PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
             L    E   +DY FT V+S     + V  G+Q+H + +K G++  +++ NA+VTMY K
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
                EA +MFD+  +RN I+W+A+++GY ++G   +A+  F      GI      +  V
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           ++ CS    LE G QLH F +K G+   +   TALVD+YAK G L  AR   D    +  
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
           A + +++SG+++    D E+ ++L+ + + AG+ P+  T + +L   +S A L  G+ +H
Sbjct: 389 ALWTSLISGYVQN--SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            ++IK G+  +V +G+AL TMY+KCGS++    +F+   ++D+VSWNAM+S  + +G G 
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL LFEEM  EG  PDD++ + ++ AC + G  E G   FN +    GL P ++H+ACM
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VDLL RAG+L EA   I S+       LWR L+S  K     +  + A ++L+ L  +++
Sbjct: 567 VDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRES 626

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
            +++ +S +Y   G + +  +V   M    +SKE GCSWIE+ ++ H FV     HP  E
Sbjct: 627 STYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIE 686

Query: 728 EIYSKLDLLNDEMK----LKVKDSSAFELQD 754
           E    + L++ +M     + V DSS  E ++
Sbjct: 687 ETKDLVCLVSRQMIEEGFVTVLDSSFVEEEE 717



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 192/400 (48%), Gaps = 19/400 (4%)

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             ++  P+  T    ++   +   +  G+ +HG  ++ G    I   N +V  Y K G  
Sbjct: 6   FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65

Query: 312 EEAERMFDAISERNLISWTALISGYVRSG---HGGKAINGFLEFLDLGICCDSSCLATVI 368
            +A  +F+AI  ++++SW +LI+GY ++G        +  F E     I  ++  LA + 
Sbjct: 66  AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
              S   +  +G Q H   +K     D+ + T+LV +Y K G ++    +      + T 
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185

Query: 429 EFNAILSGFMEKIADDEE-DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
            ++ ++SG+  +   +E   V  LF +++  G + D V F+ +LS  A+   +  GR +H
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIH 244

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
             +IK G    V + NAL+TMY+KC S++ A ++F    DR+ ++W+AM++ Y+ +G   
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL 304

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPIL 601
            A+ LF  M   G  P + +I+GVL AC         IC   E +Q++      G    L
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNAC-------SDICYLEEGKQLHSFLLKLGFERHL 357

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
                +VD+  +AG L++A    +         LW +L+S
Sbjct: 358 FATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLIS 396


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 216/669 (32%), Positives = 383/669 (57%), Gaps = 4/669 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL++G+ VH  ++ SG + D F AN L+ +YAK +    +++LFD +  R+ ++W +L  
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y+        +G+  +M  S  K NE + S ++ AC+ L D   G+ IH + IK G++ 
Sbjct: 232 CYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           + F   +L+ MY   G   +A +VF  +   D+   N +I         E A  +   + 
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK 351

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            S   PN +T ++ +  C   +G++E G+QLH   +K  +  ++ V   +V MY K  + 
Sbjct: 352 RSGICPNIFTLSSALKAC-AGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 410

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+A   F+ + E++LI+W A+ISGY +     +A++ F+E    GI  + + L+T++   
Sbjct: 411 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 470

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +    + +  Q+HG ++K G+ SD+ +  +L+D Y K   ++ A  + +  +      F 
Sbjct: 471 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 530

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           ++++ + +      E+ + LF + +   ++PD    S LL+  A+ +   +G+ LH + +
Sbjct: 531 SMITAYAQ--YGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHIL 588

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+  D+  GN+L+ MYAKCGSID A + F  +++R IVSW+AM+   A HG G+ AL 
Sbjct: 589 KYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQ 648

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF +M +EG +P+ I+++ VL AC ++GL       F  +E+++G +P+ EH+ACM+DLL
Sbjct: 649 LFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLL 708

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAG+++EA+ L+N  PF  +  +W  L+  +++  + +    A++ L  LEP+ +G+ +
Sbjct: 709 GRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHV 768

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L++N+YA  G  +  A+VR  M D ++ KE G SWIE+  K++ F+   + H  S+EIY+
Sbjct: 769 LLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYA 828

Query: 732 KLDLLNDEM 740
           KLD L+D M
Sbjct: 829 KLDELSDLM 837



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 194/640 (30%), Positives = 325/640 (50%), Gaps = 23/640 (3%)

Query: 10  LQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISI 69
           L  PFK     P L + VP   FS +P++  A L  I   + +  ++ ++   +L+    
Sbjct: 17  LHLPFKPA---PKLIQTVP--QFSQDPQT-TAILNLIDKGNFTPTSVSYS---KLLSQCC 67

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
            +  L+ G  +HA + KSG  +D    N+LINLY+K      A+KL D       ++W++
Sbjct: 68  TTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSA 127

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI GY  +G     L    +M+    K NE T S +L+ACS+++D   G+Q+H   + SG
Sbjct: 128 LISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           FE +VFV  +L+ MY     F +++ +F  +  ++V   N +   Y +      A  +F 
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFY 247

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            ++ S  +PN+++ +++++ C        GK +HG  +K G   +    NA+V MY K G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              +A  +F+ I + +++SW A+I+G V   H  +A+    +    GIC +   L++ + 
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALK 367

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+     ELG QLH   +K    SD+ +   LVD+Y+K   L+ ARM  +    K    
Sbjct: 368 ACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIA 427

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NAI+SG+ +   D E   + LF +    G+  +  T S +L  +A    +   R +H  
Sbjct: 428 WNAIISGYSQYWEDME--ALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGL 485

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           S+K+G+ +D+ V N+LI  Y KC  ++ A +IF+  +  D+VS+ +M++AYA +G G+ A
Sbjct: 486 SVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEA 545

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA--CM 607
           L LF EM+     PD      +L AC      E G  L   I + YG   +L+ FA   +
Sbjct: 546 LKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK-YGF--VLDIFAGNSL 602

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           V++  + G + +A        FSE  L  R +VS S ++ 
Sbjct: 603 VNMYAKCGSIDDA-----GRAFSE--LTERGIVSWSAMIG 635



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 196/385 (50%), Gaps = 5/385 (1%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K   G G  +LG+ +H+ L+K   ++D F +  L+++Y+K + L+ A+  F+ +  +  
Sbjct: 366 LKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDL 425

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           I W ++I GY    +    L +  +M++    FN+ T S IL++ + L+      Q+H  
Sbjct: 426 IAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGL 485

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           ++KSGF ++++V  SLI  Y       +AE +F      D+     MI  Y + G+ E A
Sbjct: 486 SVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEA 545

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             +F+ +   + +P+ +  +++++ C      E+GKQLH   +K+G V +I  GN++V M
Sbjct: 546 LKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNM 605

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  ++A R F  ++ER ++SW+A+I G  + GHG +A+  F + L  G+  +   L
Sbjct: 606 YAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITL 665

Query: 365 ATVIDGCSVCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            +V+  C+    + E  L         G+         ++D+  + G +  A  L++   
Sbjct: 666 VSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVN--- 722

Query: 424 CKYTAEFNAILSGFMEKIADDEEDV 448
            K   E NA + G +   A   +DV
Sbjct: 723 -KMPFEANASVWGALLGAARIHKDV 746



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 2/272 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K + G   + + + VH   +KSG  +D +  N+LI+ Y K + ++ A+++F+   +  
Sbjct: 466 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 525

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++TS+I  Y   G  E  L +  +M   E K +   CS +L AC+ L     G+Q+H 
Sbjct: 526 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 585

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K GF  ++F G SL++MY   G   +A   F  L  + +   + MI    + G    
Sbjct: 586 HILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQ 645

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVGNAIV 302
           A  +F  +L     PN  T  +V+  C     V E K     +   FG          ++
Sbjct: 646 ALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMI 705

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            + G+ G   EA  + + +  E N   W AL+
Sbjct: 706 DLLGRAGKINEAVELVNKMPFEANASVWGALL 737


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/671 (32%), Positives = 365/671 (54%), Gaps = 2/671 (0%)

Query: 71   SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
            S  L  G+ +H+ + + G  +D    N+LI++YA+   L  A++LF+ M  R  I+W ++
Sbjct: 398  SKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAI 457

Query: 131  IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            I GY    D    + +   M     K    T   +L AC+       G+ IH   ++SG 
Sbjct: 458  IAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGI 517

Query: 191  ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            ++N  +  +L++MY   G   EA+NVF G   +D+   N MI  + + G  E A+ +F+ 
Sbjct: 518  KSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLE 577

Query: 251  LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
            +     EP+  TF +V+  C     +E G+Q+H L ++ G+  ++++GNA++ MY + G 
Sbjct: 578  MKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGS 637

Query: 311  SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             ++A  +F ++  RN++SWTA+I G+   G   KA   F +  + G     S  ++++  
Sbjct: 638  LQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKA 697

Query: 371  CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            C   + L+ G ++    +  GY  D  +G AL+  Y+K G +  AR + D    +    +
Sbjct: 698  CMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSW 757

Query: 431  NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
            N +++G+ +         +    Q +  G+  +  +F  +L+  +S + L  G+ +HA  
Sbjct: 758  NKMIAGYAQNGLGG--TALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEI 815

Query: 491  IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
            +K     DV VG ALI+MYAKCGS++ A ++F   +++++V+WNAM++AYA HGL   AL
Sbjct: 816  VKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKAL 875

Query: 551  LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
              F  M +EG  PD  +   +L AC +SGL   G  +F+ +E  +GL P +EH+ C+V L
Sbjct: 876  DFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGL 935

Query: 611  LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
            LGRAGR  EA  LIN  PF     +W TL+   ++  N   +  A+   L L  ++   +
Sbjct: 936  LGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVY 995

Query: 671  ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
            +L+SN+YA  G  D+ AK+R  M    + KE G SWIE+D+ +H F+A+ + HPE+ EIY
Sbjct: 996  VLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIY 1055

Query: 731  SKLDLLNDEMK 741
             +L  L+ EM+
Sbjct: 1056 EELKRLSLEME 1066



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/512 (30%), Positives = 270/512 (52%), Gaps = 2/512 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           LV+       L   + +HA ++++G   D F +N LIN+Y K   +  A ++F  M  R 
Sbjct: 88  LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+W SLI  Y   G  +    +  +M  +    ++ T   IL AC    +  +G++IH+
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I++G++ +  V  SL++MY        A  VF G+  +DV   N M+  Y +    E 
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +F  + S    P+  T+ N++        ++EGK++H LAV  G+  +I VG A+ T
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALAT 327

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           M+ + G    A++  +A ++R+++ + ALI+   + GH  +A   + +    G+  + + 
Sbjct: 328 MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTT 387

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
             +V++ CS    L  G  +H    + G+ SDV++G +L+ +YA+ GDL  AR L +   
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP 447

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +NAI++G+  +  +D  + M L+ Q +  G++P  VTF  LLS   + +    G
Sbjct: 448 KRDLISWNAIIAGYARR--EDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDG 505

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +H   +++G  ++  + NAL+ MY +CGSI  A  +F+G   RDI+SWN+M++ +A H
Sbjct: 506 KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQH 565

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           G  + A  LF EMK+EG  PD I+   VL  C
Sbjct: 566 GSYEAAYKLFLEMKKEGLEPDKITFASVLVGC 597



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 278/573 (48%), Gaps = 12/573 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ +H   +  G  +D      L  ++ +   +  A++  +    R  + + +LI  
Sbjct: 300 LDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAA 359

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               G YE        M       N  T   +L ACS  +    GE IH+   + G  ++
Sbjct: 360 LAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSD 419

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V +G SLISMY   G    A  +F  +  +D+   N +I  Y +  +   A  ++  + S
Sbjct: 420 VQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQS 479

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +P   TF +++S C  +    +GK +H   ++ G+     + NA++ MY + G   E
Sbjct: 480 EGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIME 539

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+ +F+    R++ISW ++I+G+ + G    A   FLE    G+  D    A+V+ GC  
Sbjct: 540 AQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKN 599

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              LELG Q+H   I+ G   DV LG AL+++Y + G L+ A  +      +    + A+
Sbjct: 600 PEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAM 659

Query: 434 LSGFMEKIADDEED--VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           + GF    AD  ED     LF Q +  G +P   TFS +L    S ACL  G+ + A+ +
Sbjct: 660 IGGF----ADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHIL 715

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
            +GY  D  VGNALI+ Y+K GS+  A ++F  + +RDI+SWN M++ YA +GLG  AL 
Sbjct: 716 NSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQ 775

Query: 552 LFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
              +M+ +G   +  S + +L AC  +S L EG       +++   ++  +   A ++ +
Sbjct: 776 FAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKR--KMQGDVRVGAALISM 833

Query: 611 LGRAGRLSEAMNLINSSPFSESPLL-WRTLVSV 642
             + G L EA  + ++  F+E  ++ W  +++ 
Sbjct: 834 YAKCGSLEEAQEVFDN--FTEKNVVTWNAMINA 864



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 146/574 (25%), Positives = 292/574 (50%), Gaps = 12/574 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            +L+ G+ +H+ ++++G Q D    N+L+N+Y K   L  A+++F G+  R  +++ +++
Sbjct: 197 AELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTML 256

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA---CSLLEDRIFGEQIHAFAIKS 188
             Y      E  +G+   M       ++ T   +L+A    S+L++   G++IH  A+  
Sbjct: 257 GLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE---GKRIHKLAVNE 313

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  +++ VGT+L +M+   G    A+      A +DV   N +I    + G  E AF  +
Sbjct: 314 GLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQY 373

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             + S     N  T+ +V++ C  +  +  G+ +H    + G   ++ +GN++++MY + 
Sbjct: 374 YQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARC 433

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A  +F+ + +R+LISW A+I+GY R    G+A+  + +    G+         ++
Sbjct: 434 GDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLL 493

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+  S    G  +H   ++ G  S+  L  AL+++Y + G +  A+ + +G   +   
Sbjct: 494 SACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDII 553

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N++++G  +      E    LF + +  G+EPD +TF+ +L    +   L  GR +H 
Sbjct: 554 SWNSMIAGHAQH--GSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHM 611

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             I++G   DV +GNALI MY +CGS+  A+++F  +  R+++SW AM+  +A  G  + 
Sbjct: 612 LIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRK 671

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSG-LSEGGICLFNEIEQIYGLRPILEHFACM 607
           A  LF +M+ +GF P   +   +L+AC+ S  L EG   + + +   Y L   + +   +
Sbjct: 672 AFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN--AL 729

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +    ++G +++A  + +  P +   + W  +++
Sbjct: 730 ISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIA 762



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 250/481 (51%), Gaps = 12/481 (2%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +++ C+        ++IHA  +++G   ++F+   LI+MY       +A  VF  +  +D
Sbjct: 88  LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V   N +I  Y + G  + AF +F  + ++ F P+  T+ ++++ C     +E GK++H 
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             ++ G  R+  V N+++ MYGK      A ++F  I  R+++S+  ++  Y +  +  +
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
            I  F +    GI  D      ++D  +  S L+ G ++H  A+  G  SD+R+GTAL  
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALAT 327

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           ++ + GD+  A+  L+ F+ +    +NA+++   +      E+    + Q R  G+  + 
Sbjct: 328 MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQH--GHYEEAFEQYYQMRSDGVVMNR 385

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
            T+  +L+  ++   L  G  +H++  + G+++DV +GN+LI+MYA+CG +  A ++F  
Sbjct: 386 TTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNT 445

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           +  RD++SWNA+++ YA       A+ L+++M+ EG  P  ++ L +L AC  S     G
Sbjct: 446 MPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDG 505

Query: 585 ICLFNEIEQIYGLRPILE---HFA-CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
             +  +I     LR  ++   H A  ++++  R G + EA N+   +  +   + W +++
Sbjct: 506 KMIHEDI-----LRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTR-ARDIISWNSMI 559

Query: 641 S 641
           +
Sbjct: 560 A 560



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 195/395 (49%), Gaps = 9/395 (2%)

Query: 252 LSSDFEP-----NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           LS+ ++P     N   + +++  C     + E K++H   V+ GV  +I + N ++ MY 
Sbjct: 69  LSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYV 128

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K     +A ++F  +  R++ISW +LIS Y + G   KA   F E    G         +
Sbjct: 129 KCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYIS 188

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++  C   + LE G ++H   I+ GY  D R+  +L+++Y K  DL SAR +  G   + 
Sbjct: 189 ILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRD 248

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N +L  + +K     E+ + LF Q    G+ PD VT+  LL    + + L  G+ +
Sbjct: 249 VVSYNTMLGLYAQKAY--VEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRI 306

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H  ++  G  +D+ VG AL TM+ +CG + GA Q  +  +DRD+V +NA+++A A HG  
Sbjct: 307 HKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHY 366

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           + A   + +M+ +G   +  + L VL AC  S     G  + + I ++ G    ++    
Sbjct: 367 EEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEV-GHSSDVQIGNS 425

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           ++ +  R G L  A  L N+ P     + W  +++
Sbjct: 426 LISMYARCGDLPRARELFNTMP-KRDLISWNAIIA 459



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 127/259 (49%), Gaps = 1/259 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K  + S  L  G+ V A +L SG + DT   N LI+ Y+K   +  A+K+FD M  R 
Sbjct: 694 ILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRD 753

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W  +I GY  +G   + L  A  M       N+ +   IL ACS       G+++HA
Sbjct: 754 IMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHA 813

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K   + +V VG +LISMY   G   EA+ VF     K+V   N MI  Y + G +  
Sbjct: 814 EIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASK 873

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIV 302
           A   F  +     +P+  TFT+++S C  +  V EG ++   L  + G+   I     +V
Sbjct: 874 ALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLV 933

Query: 303 TMYGKHGMSEEAERMFDAI 321
            + G+ G  +EAE + + +
Sbjct: 934 GLLGRAGRFQEAETLINQM 952


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/664 (33%), Positives = 378/664 (56%), Gaps = 2/664 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VHA + K GS ++T   N LI LY +F  L +A+++F  M     +T+ +LI  +  
Sbjct: 162 GRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQ 221

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G+ ES L I  +M  S    +  T + +L AC+ + D   G+Q+H++ +K+G   +  +
Sbjct: 222 CGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYII 281

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL+ +Y   G   EA  +F+     +V   N M++ Y +  +   +F +F  ++++  
Sbjct: 282 EGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGV 341

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN++T+  ++  C     +  G+Q+H L++K G   ++ V   ++ MY K+G  ++A R
Sbjct: 342 RPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARR 401

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           + + +  ++++SWT++I+GYV+     +A+  F +    GI  D+  LA+ I  C+    
Sbjct: 402 ILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKA 461

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           +  G Q+H      GY +DV +  ALV++YA+ G  K A  L +    K    +N ++SG
Sbjct: 462 MRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSG 521

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F +  +   E+ + +F +   AG++ +  TF   +S SA+ A + +G+ +HA  IKTG  
Sbjct: 522 FAQ--SGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCT 579

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           ++  V NALI++Y KCGSI+ A   F  +S+R+ VSWN ++++ + HG G  AL LF++M
Sbjct: 580 SETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQM 639

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K+EG  P+D++ +GVL AC + GL E G+  F  +   +G+ P  +H+AC+VD+LGRAG+
Sbjct: 640 KQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQ 699

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A   +   P S + ++WRTL+S  ++  N +   LA+K LL+LEP D+ S++L+SN 
Sbjct: 700 LDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNA 759

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA  G       VR  M D  + KE G SWIE+ + +H F    + HP + +IY  L  L
Sbjct: 760 YAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADL 819

Query: 737 NDEM 740
           +D +
Sbjct: 820 DDRL 823



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 246/481 (51%), Gaps = 2/481 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA  +  G   D    N LI+LYAK   +  A+++F+ +  R  ++W +++ GY  +G 
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E  +G+   M+ S      +  S +L AC+       G  +HA   K G  +   VG +
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           LI++Y   G    AE VF  + Y D    N +I  + + G  E A  +F  +  S + P+
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T  ++++ C     + +GKQLH   +K G+  +  +  +++ +Y K G+  EA  +F 
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
           +    N++ W  ++  Y +     K+ + F + +  G+  +      ++  C+    + L
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G Q+H  +IK G+ SD+ +   L+D+Y+K G L  AR +L+    K    + ++++G+++
Sbjct: 364 GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQ 423

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
              +  ++ +  F   +L G+ PD +  +  +S  A    + +G+ +H+    +GY+ADV
Sbjct: 424 H--EFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADV 481

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            + NAL+ +YA+CG    AF +F+ I  +D ++WN M+S +A  GL + AL +F +M + 
Sbjct: 482 SIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQA 541

Query: 560 G 560
           G
Sbjct: 542 G 542



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 238/530 (44%), Gaps = 17/530 (3%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC-SLLEDRIF 177
           M  R+A +    + G+L   D E +L +     R          +  L  C   ++    
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
              IHA AI  G   +   G  LI +Y   G  + A  VF  L+ +D      M+  Y +
Sbjct: 61  VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  ++  +  S   P  Y  ++V+S C +    E+G+ +H    K G   E  V
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVV 180

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA++ +Y + G    AER+F  +   + +++  LIS + + G+G  A+  F E    G 
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   +A+++  C+   +L  G QLH + +K G   D  +  +L+D+Y K G +  A  
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE 300

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +           +N +L  + +    D      LF Q   AG+ P+  T+  LL      
Sbjct: 301 IFKSGDRTNVVLWNLMLVAYGQ--ISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYA 358

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +  G  +H  SIKTG+ +D+ V   LI MY+K G +D A +I + +  +D+VSW +M+
Sbjct: 359 GEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMI 418

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY-- 595
           + Y  H   K AL  F++M+  G  PD+I +   + AC        GI    + +QI+  
Sbjct: 419 AGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISAC-------AGIKAMRQGQQIHSR 471

Query: 596 ----GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               G    +  +  +V+L  R GR  EA +L  +    +  + W  +VS
Sbjct: 472 VYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDK-ITWNGMVS 520



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 224/480 (46%), Gaps = 16/480 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL  G+ +H++LLK+G   D     +L++LY K   +  A ++F      + + W  ++
Sbjct: 258 GDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLML 317

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y    D      + C M  +  + NE T   +L  C+   +   GEQIH  +IK+GFE
Sbjct: 318 VAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFE 377

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++++V   LI MY   G   +A  +   L  KDV     MI  Y +    + A   F  +
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDM 437

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P++    + IS C     + +G+Q+H      G   ++S+ NA+V +Y + G S
Sbjct: 438 QLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRS 497

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           +EA  +F+AI  ++ I+W  ++SG+ +SG   +A+  F++    G+  +     + I   
Sbjct: 498 KEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISAS 557

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  ++++ G Q+H   IK G  S+  +  AL+ +Y K G ++ A+M     S +    +N
Sbjct: 558 ANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWN 617

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-------R 484
            I++   +     E   + LF Q +  G++P+ VTF  +L+  +    +  G        
Sbjct: 618 TIITSCSQHGWGLE--ALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMS 675

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           S H    +  + A V      + +  + G +D A +  + +    + + W  +LSA  +H
Sbjct: 676 SEHGIHPRPDHYACV------VDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVH 729



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 187/361 (51%), Gaps = 1/361 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L++    +G++ LG+ +H   +K+G ++D + +  LI++Y+K+  LD A+++ + + 
Sbjct: 348 YPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLE 407

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  ++WTS+I GY+     +  L    DM       +    +  + AC+ ++    G+Q
Sbjct: 408 AKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQ 467

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH+    SG+  +V +  +L+++Y   G  +EA ++F  + +KD    N M+  + ++G 
Sbjct: 468 IHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGL 527

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VF+ +  +  + N +TF + IS       +++GKQ+H   +K G   E  V NA
Sbjct: 528 YEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANA 587

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++++YGK G  E+A+  F  +SERN +SW  +I+   + G G +A++ F +    G+  +
Sbjct: 588 LISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPN 647

Query: 361 SSCLATVIDGCSVCSNLELGL-QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    +E GL      + +HG          +VDI  + G L  AR  +
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFV 707

Query: 420 D 420
           +
Sbjct: 708 E 708


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/671 (34%), Positives = 376/671 (56%), Gaps = 4/671 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+ G+A+HA LL++GS +  +  N+L+NLYAK   +  A+ +F+ +  +  ++W  LI 
Sbjct: 25  DLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLIN 84

Query: 133 GYLDDGD--YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           GY   G   Y  V+ +   M       N HT S +  A S   +   G Q HA AIK+  
Sbjct: 85  GYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSN 144

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             +VFVG+SLI+MY   GC  +A  VF  +  ++      +I  Y     +  A+ +F  
Sbjct: 145 FYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXL 204

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +   +   + + +T+V+S       V  GKQ+H LA+K G++   SVGNA+VTMYGK G 
Sbjct: 205 MRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGC 264

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            ++A + F+   +++ I+W+A+I+GY ++G   +A+N F      G          VI+ 
Sbjct: 265 LDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINA 324

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           CS    LE G Q+HG+++K GY   +   TALVD+YAK G L  AR   D         +
Sbjct: 325 CSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLW 384

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
            +++SG+ +    + E  + L+ + ++  + P  +T + +L   +S A L +G+ +HA +
Sbjct: 385 TSMISGYAQN--GENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQT 442

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK G++ +V +G+AL TMYAKCGS++    +F+ +  RDI++WNAM+S  + +G G  AL
Sbjct: 443 IKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKAL 502

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            LFEE++     PD ++ + VL AC + GL E G   F  +   +G+ P +EH+ACMVD+
Sbjct: 503 ELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDI 562

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           L RAG+L E    I S+       LWR L+   +   N +    A ++L++L  +++ ++
Sbjct: 563 LSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAY 622

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           IL+S++Y   G  D+  +VR  M    ++KE GCSWIE+ S++H FV   + HP+  +I 
Sbjct: 623 ILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKIC 682

Query: 731 SKLDLLNDEMK 741
           S+L  L D MK
Sbjct: 683 SELRRLRDHMK 693



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 237/479 (49%), Gaps = 6/479 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L  C+  +D   G+ IHA  +++G  ++V++  SL+++Y   G   +A+ VF  +  KD
Sbjct: 16  LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75

Query: 225 VRCVNFMILEYNKAGESEMAF--HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           V   N +I  Y++ G    +F   +F  + + +  PN +TF+ V +    +     G Q 
Sbjct: 76  VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H LA+K     ++ VG++++ MY K G   +A ++FD I ERN +SW  +ISGY      
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +A   F          D     +V+   +V   +  G Q+H  A+K+G LS   +G AL
Sbjct: 196 FEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNAL 255

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           V +Y K G L  A    +    K    ++A+++G+ +  A D  + + LF    L G +P
Sbjct: 256 VTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQ--AGDSHEALNLFYNMHLNGNKP 313

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
              TF  +++  +    L  G+ +H YS+K GY   +    AL+ MYAKCGS+  A + F
Sbjct: 314 SEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGF 373

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             + + DIV W +M+S YA +G  + AL L+  M+ E   P ++++  VL+AC      E
Sbjct: 374 DYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALE 433

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            G  +  +  + YG    +   + +  +  + G L +  NL+     S   + W  ++S
Sbjct: 434 QGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDG-NLVFRRMPSRDIMTWNAMIS 490



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 196/395 (49%), Gaps = 24/395 (6%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P   +F +++  C     +++GK +H   ++ G    + + N++V +Y K G   +A+ +
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 318 FDAISERNLISWTALISGYVRSGHGGKA--INGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           F++I+ ++++SW  LI+GY + G  G +  +  F          +    + V    S   
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
               GLQ H  AIK     DV +G++L+++Y K G +  AR + D    + T  +  I+S
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187

Query: 436 GF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           G+ ME++A +  ++  L  ++  A    D   ++ +LS       +  G+ +H  ++K G
Sbjct: 188 GYAMERMAFEAWELFXLMRREEGA---HDKFIYTSVLSALTVPDLVHYGKQIHCLALKNG 244

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             +   VGNAL+TMY KCG +D A + F+   D+D ++W+AM++ YA  G    AL LF 
Sbjct: 245 LLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFY 304

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG--LRPILE----HFACMV 608
            M   G  P + + +GV+ AC   G  E G       +QI+G  L+   E        +V
Sbjct: 305 NMHLNGNKPSEFTFVGVINACSDIGALEEG-------KQIHGYSLKAGYECQIYFMTALV 357

Query: 609 DLLGRAGRLSEAMNLINSSPFSESP--LLWRTLVS 641
           D+  + G L +A    +   + + P  +LW +++S
Sbjct: 358 DMYAKCGSLVDARKGFD---YLKEPDIVLWTSMIS 389



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 131/264 (49%), Gaps = 2/264 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ G+ +H + LK+G +   +    L+++YAK   L  A+K FD +     + WTS+I
Sbjct: 329 GALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMI 388

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G+ E+ L + C M       +E T + +L ACS L     G+QIHA  IK GF 
Sbjct: 389 SGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFS 448

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             V +G++L +MY   G   +   VFR +  +D+   N MI   ++ GE   A  +F  L
Sbjct: 449 LEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEEL 508

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV-KFGVVREISVGNAIVTMYGKHG- 309
                +P+  TF NV+S C     VE GK    + + +FG+V  +     +V +  + G 
Sbjct: 509 RHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGK 568

Query: 310 MSEEAERMFDAISERNLISWTALI 333
           + E  E +  A  +  +  W  L+
Sbjct: 569 LHETKEFIESATIDHGMCLWRILL 592



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 17/327 (5%)

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+   +L+ G  +H   ++ G  S V L  +LV++YAK G +  A+++ +  + K    +
Sbjct: 20  CTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSW 79

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N +++G+ +K       VM LF + R     P+  TFS + + ++S      G   HA +
Sbjct: 80  NCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALA 139

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IKT    DV VG++LI MY K G +  A ++F  I +R+ VSW  ++S YA+  +   A 
Sbjct: 140 IKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAW 199

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPILEHF 604
            LF  M+RE  A D      VL A     L   G       +QI+      GL  I    
Sbjct: 200 ELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYG-------KQIHCLALKNGLLSIASVG 252

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK--FSILASKRLLDL 662
             +V + G+ G L +A+     S   +  + W  +++      +S    ++  +  L   
Sbjct: 253 NALVTMYGKCGCLDDALKTFELSG-DKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKV 689
           +P +  +F+ V N  +  G L+E  ++
Sbjct: 312 KPSEF-TFVGVINACSDIGALEEGKQI 337



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 101/190 (53%), Gaps = 16/190 (8%)

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           + P   +F  LL     Q  L +G+++HA  ++TG  + V + N+L+ +YAKCGSI  A 
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 520 QIFKGISDRDIVSWNAMLSAYALHG-LGKGALL-LFEEMKREGFAPDDISILGVLQACIY 577
            +F+ I+++D+VSWN +++ Y+  G +G   ++ LF+ M+ E   P+  +  GV  A   
Sbjct: 66  LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHF------ACMVDLLGRAGRLSEAMNLINSSPFSE 631
           S  + GG+       Q + L     +F      + ++++  + G + +A  + ++ P   
Sbjct: 126 SPETFGGL-------QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIP-ER 177

Query: 632 SPLLWRTLVS 641
           + + W T++S
Sbjct: 178 NTVSWATIIS 187


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/642 (35%), Positives = 368/642 (57%), Gaps = 9/642 (1%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           +Q+LFD    +       L+  +  +   +  L +   + RS    +  + S +L+ C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
           L DRI G+Q+H   IK GF  +V VGTSL+ MY  +    + E VF  +  K+V     +
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           +  Y + G +E A  +F  +     +PN +TF  V+     +  VE+G Q+H + +K G+
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
              I VGN++V MY K  M  +A+ +FD++  RN +SW ++I+G+V +G   +A   F  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
               G+    +  ATVI  C+    +    QLH   IK+G   D+ + TAL+  Y+K  +
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 412 LKSA-RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ-QRLAGMEPDPVTFSR 469
           +  A ++       +    + AI+SG+++    D    M LF Q +R  G+EP+  TFS 
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDR--AMNLFCQMRREEGVEPNEFTFSS 402

Query: 470 LL-SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
           +L + +A  A + +G+  H+ SIK+G++  + V +AL+TMYAK G+I+ A ++FK   DR
Sbjct: 403 VLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDR 462

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D+VSWN+M+S YA HG GK +L +FEEM+ +    D I+ +GV+ AC ++GL   G   F
Sbjct: 463 DLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYF 522

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
           + + + Y + P +EH++CMVDL  RAG L +AM+LIN  PF     +WRTL++  ++  N
Sbjct: 523 DLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLN 582

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            +   LA+++L+ L+P+D+ +++L+SN+YA  G   E AKVR  M+  ++ KEAG SWIE
Sbjct: 583 VQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIE 642

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAF 750
           + +K   F+A    HP+S+ IY KL    +E+ +++KD+  +
Sbjct: 643 VKNKTFSFMAGDLSHPQSDRIYLKL----EELSIRLKDAGYY 680



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 235/476 (49%), Gaps = 7/476 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  +G+ VH   +K G   D     +L+++Y K   ++  +++FD M V++ ++WTSL+ 
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY  +G  E  L +   M     K N  T + +L   +       G Q+H   IKSG ++
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            +FVG S+++MY  S    +A+ VF  +  ++    N MI  +   G    AF +F  + 
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               +     F  VI +C     +   KQLH   +K G   ++++  A++  Y K    +
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346

Query: 313 EAERMFDAI-SERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCLATVIDG 370
           +A ++F  +   +N++SWTA+ISGYV++G   +A+N F +   + G+  +    ++V++ 
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNA 406

Query: 371 CSV-CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           C+   +++E G Q H  +IK G+ + + + +ALV +YAK G+++SA  +      +    
Sbjct: 407 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVS 466

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N+++SG+ +     +   + +F + R   +E D +TF  ++S       +  G+     
Sbjct: 467 WNSMISGYAQHGCGKKS--LKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDL 524

Query: 490 SIKTGYAADVIVG-NALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            +K  +    +   + ++ +Y++ G ++ A  +   +        W  +L+A  +H
Sbjct: 525 MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 186/356 (52%), Gaps = 10/356 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G ++ G  VH  ++KSG  +  F  N+++N+Y+K   +  A+ +FD M  R+A++W S+I
Sbjct: 207 GAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMI 266

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G++ +G       +   M     K  +   + +++ C+ +++  F +Q+H   IK+G +
Sbjct: 267 AGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSD 326

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGL----AYKDVRCVNFMILEYNKAGESEMAFHV 247
            ++ + T+L+  Y  S C  E ++ F+        ++V     +I  Y + G ++ A ++
Sbjct: 327 FDLNIKTALMVAY--SKC-SEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNL 383

Query: 248 FVHLLSSD-FEPNDYTFTNVISVC-YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           F  +   +  EPN++TF++V++ C      VE+GKQ H  ++K G    + V +A+VTMY
Sbjct: 384 FCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMY 443

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G  E A  +F    +R+L+SW ++ISGY + G G K++  F E     +  D     
Sbjct: 444 AKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFI 503

Query: 366 TVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            VI  C+    +  G +     +K +  +  +   + +VD+Y++ G L+ A  L++
Sbjct: 504 GVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLIN 559



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 135/255 (52%), Gaps = 4/255 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VR 122
           ++K+     ++   + +H  ++K+GS  D      L+  Y+K + +D A KLF  M  V+
Sbjct: 300 VIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQ 359

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRI-FGEQ 180
           + ++WT++I GY+ +G  +  + + C M R E  + NE T S +L AC+     +  G+Q
Sbjct: 360 NVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQ 419

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
            H+ +IKSGF N + V ++L++MY   G    A  VF+    +D+   N MI  Y + G 
Sbjct: 420 FHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGC 479

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-FGVVREISVGN 299
            + +  +F  + S + E +  TF  VIS C     V EG++   L VK + +V  +   +
Sbjct: 480 GKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYS 539

Query: 300 AIVTMYGKHGMSEEA 314
            +V +Y + GM E+A
Sbjct: 540 CMVDLYSRAGMLEKA 554


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 252/798 (31%), Positives = 401/798 (50%), Gaps = 98/798 (12%)

Query: 18  QSLPPLKKKVPINTFS-----PNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSG 72
           QS  P K  +PI+ FS     P  K   +++       CS+R  L               
Sbjct: 19  QSKSPFKT-LPISPFSSYQATPTKKKTFSHIFQ----ECSDRKALCP------------- 60

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
               G+  HA ++ +  +   F  N LI +Y K + L  A K+FDGM  R  ++W +++ 
Sbjct: 61  ----GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLF 116

Query: 133 GYLDDGD-------YESVLGIACD--------MYRSEEKFNEHTCSVILEACSLLEDRIF 177
           GY   GD       ++++ G  C         M R    F+  T +V+L++CS LED   
Sbjct: 117 GYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGG 176

Query: 178 GEQIHAFAIKSGFE---------------------------------------------- 191
           G QIH  A+K GF+                                              
Sbjct: 177 GIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGH 236

Query: 192 -------NNVFVGTSLISMYFHSGCFREAEN-VFRGLAYKDVRCVNFMILEYNKAGESEM 243
                   +V +GT+ + MY       +  N +F  L   +++  N +I+ Y ++ +   
Sbjct: 237 ALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIE 296

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  L  S    ++ + +     C    G  EG Q+HGL++K      I V NAI+ 
Sbjct: 297 ALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILD 356

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MYGK G   EA  +F+ +  R+ +SW A+I+ + ++G+  K ++ F+  L  G+  D   
Sbjct: 357 MYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFT 416

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
             +V+  C+    L  G+++H   IK     D  +G AL+D+Y+K G ++ A  L D  +
Sbjct: 417 YGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA 476

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +NAI+SGF   +    E+    FS+    G++PD  T++ +L   A+   +  G
Sbjct: 477 EQTVVSWNAIISGF--SLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELG 534

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +HA  IK    +D  + + L+ MY+KCG++     IF+   +RD V+WNAM+  YA H
Sbjct: 535 KQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQH 594

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           GLG+ AL +FE M+ E   P+  + L VL+AC + GL E G+  F+ +   YGL P LEH
Sbjct: 595 GLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEH 654

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           ++C+VD++GR+G++S+A+ LI   PF    ++WRTL+S  K+  N + +  A+  +L LE
Sbjct: 655 YSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLE 714

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P+D+ +++L+SN+YA  GM +E  K+R  M    L KE GCSWIEI S++H F+   K H
Sbjct: 715 PEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAH 774

Query: 724 PESEEIYSKLDLLNDEMK 741
           P S+EIY  LD+L DEMK
Sbjct: 775 PRSKEIYENLDVLTDEMK 792


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/669 (32%), Positives = 361/669 (53%), Gaps = 2/669 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG+ V   +++ G Q + +E N LI LY+    +  A+++FD +  ++ +TW +LI 
Sbjct: 72  DAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIA 131

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY   G  +    +   M     + +  T   +L+ACS      +G+++HA  + +GF +
Sbjct: 132 GYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVS 191

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  +GT+L+SMY   G   +A  VF GL  +DV   N M+  Y K+G+ E AF +F  + 
Sbjct: 192 DFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQ 251

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               +PN  +F +++  C+    +  GK +H   +  G+V +I V  +++ MY   G  E
Sbjct: 252 QVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIE 311

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A R+FD +  R+++SWT +I GY  +G+   A   F    + GI  D      +++ C+
Sbjct: 312 GARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACA 371

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
           + +NL    ++H      G+ +D+ + TALV +YAK G +K AR + D    +    ++A
Sbjct: 372 ISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSA 431

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++  ++E     E      F   + + +EPD VT+  LL+       L  G  ++  +IK
Sbjct: 432 MIGAYVENGYGTE--AFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIK 489

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
               + V +GNALI M AK GS++ A  IF  +  RD+++WNAM+  Y+LHG  + AL L
Sbjct: 490 ADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYL 549

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+ M +E F P+ ++ +GVL AC  +G  + G   F  + +  G+ P ++ + CMVDLLG
Sbjct: 550 FDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLG 609

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG L EA  LI S P   +  +W +L+   ++  N   +  A++R L ++P D   ++ 
Sbjct: 610 RAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQ 669

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +S+MYA  GM +  AKVR  M    + KE GC+WIE+  K+H FV   + HP   EIY++
Sbjct: 670 LSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAE 729

Query: 733 LDLLNDEMK 741
           L  L + +K
Sbjct: 730 LARLMNAIK 738



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 264/538 (49%), Gaps = 13/538 (2%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           + + C+ L D   G+Q+    I+ G + N++   +LI +Y   G   EA  +F  +  K 
Sbjct: 63  LFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKT 122

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V   N +I  Y + G  + AF +F  ++    EP+  TF +V+  C    G+  GK++H 
Sbjct: 123 VVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHA 182

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             V  G V +  +G A+V+MY K G  ++A ++FD +  R++ ++  ++ GY +SG   K
Sbjct: 183 QVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEK 242

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A   F     +G+  +     +++DGC     L  G  +H   +  G + D+R+ T+L+ 
Sbjct: 243 AFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIR 302

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y   G ++ AR + D    +    +  ++ G+ E    + ED   LF+  +  G++PD 
Sbjct: 303 MYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAEN--GNIEDAFGLFATMQEEGIQPDR 360

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           +T+  +++  A  A L   R +H+     G+  D++V  AL+ MYAKCG+I  A Q+F  
Sbjct: 361 ITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDA 420

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           +  RD+VSW+AM+ AY  +G G  A   F  MKR    PD ++ + +L AC + G  + G
Sbjct: 421 MPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVG 480

Query: 585 ICLFNEIEQIYGLRPILEHFA---CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           + ++ +  +      ++ H      ++ +  + G +  A  + ++       + W  ++ 
Sbjct: 481 MEIYTQAIKA----DLVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWNAMIG 535

Query: 642 VSKLMANSKFSILASKRLLD--LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
              L  N++ ++    R+L     P    +F+ V +  +  G +DE  +  T + + R
Sbjct: 536 GYSLHGNAREALYLFDRMLKERFRPNSV-TFVGVLSACSRAGFVDEGRRFFTYLLEGR 592



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 213/432 (49%), Gaps = 7/432 (1%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           T+  +   C E      GKQ+    ++ G    I   N ++ +Y   G   EA ++FD++
Sbjct: 59  TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
             + +++W ALI+GY + GH  +A   F + +D G+        +V+D CS  + L  G 
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           ++H   +  G++SD R+GTALV +Y KGG +  AR + DG   +  + FN ++ G+ +  
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAK-- 236

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
           + D E    LF + +  G++P+ ++F  +L    +   L  G+++HA  +  G   D+ V
Sbjct: 237 SGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRV 296

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
             +LI MY  CGSI+GA ++F  +  RD+VSW  M+  YA +G  + A  LF  M+ EG 
Sbjct: 297 ATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGI 356

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            PD I+ + ++ AC  S        + ++++ I G    L     +V +  + G + +A 
Sbjct: 357 QPDRITYMHIMNACAISANLNHAREIHSQVD-IAGFGTDLLVSTALVHMYAKCGAIKDAR 415

Query: 622 NLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
            + ++ P     + W  ++   V        F      +  ++EP D  ++I + N    
Sbjct: 416 QVFDAMP-RRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEP-DGVTYINLLNACGH 473

Query: 680 QGMLDEAAKVRT 691
            G LD   ++ T
Sbjct: 474 LGALDVGMEIYT 485



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 2/265 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S +L   + +H+ +  +G   D   +  L+++YAK   +  A+++FD M  R  ++W+++
Sbjct: 373 SANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAM 432

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  Y+++G           M RS  + +  T   +L AC  L     G +I+  AIK+  
Sbjct: 433 IGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADL 492

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            ++V +G +LI M    G    A  +F  +  +DV   N MI  Y+  G +  A ++F  
Sbjct: 493 VSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDR 552

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-FGVVREISVGNAIVTMYGKHG 309
           +L   F PN  TF  V+S C     V+EG++     ++  G+V  + +   +V + G+ G
Sbjct: 553 MLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAG 612

Query: 310 MSEEAERMFDAISERNLIS-WTALI 333
             +EAE +  ++  +   S W++L+
Sbjct: 613 ELDEAELLIKSMPVKPTSSIWSSLL 637



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 455 QRLA--GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
           QRL   G   D  T+ +L            G+ +  + I+ G   ++   N LI +Y+ C
Sbjct: 46  QRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSIC 105

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G++  A QIF  + ++ +V+WNA+++ YA  G  K A  LF +M  EG  P  I+ L VL
Sbjct: 106 GNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVL 165

Query: 573 QAC 575
            AC
Sbjct: 166 DAC 168


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/719 (32%), Positives = 388/719 (53%), Gaps = 17/719 (2%)

Query: 29  INTFSPN--PKSQVAYLCSISS--VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFL 84
           +  +S N  P+  +A   ++ +  V C+E  L     P ++K +  +G   LG  VHA  
Sbjct: 75  VTAYSNNALPREALAAFRAMRARGVRCNEFAL-----PIVLKCAPDAG---LGVQVHAVA 126

Query: 85  LKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD-GMLVRSAITWTSLIKGYLDDGDYESV 143
           + +G   D F AN L+ +Y  F  +D A+++FD     R+A++W  ++  ++ +      
Sbjct: 127 VSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDA 186

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
           + +  +M  S  + NE   S ++ AC+   D   G ++HA  +++G++ +VF   +L+ M
Sbjct: 187 VELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDM 246

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y   G    A  VF  +   DV   N  I      G  + A  + + + SS   PN +T 
Sbjct: 247 YSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306

Query: 264 TNVISVCYENLGVEEG--KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           ++++  C           +Q+HG  +K     +  +G A+V MY K+G+ ++A ++F+ I
Sbjct: 307 SSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWI 366

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
             ++L+ W ALISG    G  G++++ F      G   + + LA V+   +    +    
Sbjct: 367 PRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTT 426

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           Q+H  A K G+LSD  +   L+D Y K   L+ A  + +  S      F ++++   +  
Sbjct: 427 QVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQ-- 484

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
            D  ED + LF +    G+EPDP   S LL+  AS +   +G+ +HA+ IK  +  DV  
Sbjct: 485 CDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFA 544

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
           GNAL+  YAKCGSI+ A   F G+ D+ +VSW+AM+   A HG GK AL +F  M  E  
Sbjct: 545 GNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERI 604

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
           AP+ I++  VL AC ++GL +     F+ +++++G+    EH++CM+DLLGRAG+L +AM
Sbjct: 605 APNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAM 664

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
            L+NS PF  +  +W  L++ S++  + +   LA+++L  LEP+ +G+ +L++N YA  G
Sbjct: 665 ELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAG 724

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           M DE AKVR  M D ++ KE   SW+E+  ++H F+   K HP + +IY+KL+ L D M
Sbjct: 725 MWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLM 783



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 155/518 (29%), Positives = 260/518 (50%), Gaps = 13/518 (2%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P L + +  +  L LG  +HA LLKSG  +  F  N+L++ Y+K      A+++FD    
Sbjct: 9   PLLTRYA-ATQSLFLGAHIHAHLLKSGLLH-AFR-NHLLSFYSKCRLPGSARRVFDETPD 65

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              ++W+SL+  Y ++      L     M     + NE    ++L+ C+   D   G Q+
Sbjct: 66  PCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CA--PDAGLGVQV 122

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV--NFMILEYNKAG 239
           HA A+ +G   ++FV  +L++MY   G   EA  VF   A +D   V  N M+  + K  
Sbjct: 123 HAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAA-RDRNAVSWNGMMSAFVKND 181

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
               A  +F  ++ S   PN++ F+ V++ C  +  +E G+++H + V+ G  +++   N
Sbjct: 182 RCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTAN 241

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+V MY K G    A  +F  + + +++SW A ISG V  GH   A+   L+    G+  
Sbjct: 242 ALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301

Query: 360 DSSCLATVIDGCSVCSNLELGL--QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
           +   L++++  C+        L  Q+HGF IK    SD  +G ALVD+YAK G L  AR 
Sbjct: 302 NVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARK 361

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +    K    +NA++SG        E   + LF + R  G + +  T + +L  +AS 
Sbjct: 362 VFEWIPRKDLLLWNALISGCSHGGCHGES--LSLFCRMRKEGSDINRTTLAAVLKSTASL 419

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +     +HA + K G+ +D  V N LI  Y KC  +  A ++F+  S  +I+++ +M+
Sbjct: 420 EAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMI 479

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +A +    G+ A+ LF EM R+G  PD   +  +L AC
Sbjct: 480 TALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNAC 517



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 177/372 (47%), Gaps = 24/372 (6%)

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G  +H   +K G++      N +++ Y K  +   A R+FD   +   +SW++L++ Y  
Sbjct: 23  GAHIHAHLLKSGLLHAFR--NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSN 80

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +    +A+  F      G+ C+   L  V+       +  LG+Q+H  A+  G   D+ +
Sbjct: 81  NALPREALAAFRAMRARGVRCNEFALPIVL---KCAPDAGLGVQVHAVAVSTGLSGDIFV 137

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTA-EFNAILSGFMEKIADDEEDVMVLFSQQRL 457
             ALV +Y   G +  AR + D  +    A  +N ++S F++   D   D + LF +   
Sbjct: 138 ANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN--DRCSDAVELFGEMVW 195

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G+ P+   FS +++       L  GR +HA  ++TGY  DV   NAL+ MY+K G I  
Sbjct: 196 SGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHM 255

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F  +   D+VSWNA +S   LHG  + AL L  +MK  G  P+  ++  +L+AC  
Sbjct: 256 AALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFA--------CMVDLLGRAGRLSEAMNLINSSPF 629
           +G        F    QI+G   +++  A         +VD+  + G L +A  +    P 
Sbjct: 316 AGAGA-----FALGRQIHGF--MIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIP- 367

Query: 630 SESPLLWRTLVS 641
            +  LLW  L+S
Sbjct: 368 RKDLLLWNALIS 379



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 6/178 (3%)

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           P + S LL+  A+   L  G  +HA+ +K+G        N L++ Y+KC     A ++F 
Sbjct: 4   PESISPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFD 61

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
              D   VSW+++++AY+ + L + AL  F  M+  G   ++ ++  VL+    +GL   
Sbjct: 62  ETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL--- 118

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           G+ + + +    GL   +     +V + G  G + EA  + + +    + + W  ++S
Sbjct: 119 GVQV-HAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS 175


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/680 (33%), Positives = 383/680 (56%), Gaps = 12/680 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  +G+ VH   +K G   D     +L+++Y K   ++  +++FD M V++ ++WTSL+ 
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY  +G  E  L +   M     K N  T + +L   +       G Q+H   IKSG ++
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            +FVG S+++MY  S    +A+ VF  +  ++    N MI  +   G    AF +F  + 
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               +     F  VI +C     +   KQLH   +K G   ++++  A++  Y K    +
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346

Query: 313 EAERMFDAI-SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           +A ++F  +   +N++SWTA+ISGYV++G   +A+N F +    G+  +    +T++   
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTAN 406

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  S      Q+H   +K  Y +   +GTAL D Y+K GD   A  + +    K    ++
Sbjct: 407 AAVS----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWS 462

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYS 490
           A+LSG+ +    D E  + +F Q    G+EP+  TFS +L + +A  A + +G+  H+ S
Sbjct: 463 AMLSGYAQ--MGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCS 520

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK+G++  + V +AL+TMYAK G+I+ A ++FK   DRD+VSWN+M+S YA HG GK +L
Sbjct: 521 IKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSL 580

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            +FEEM+ +    D I+ +GV+ AC ++GL   G   F+ + + Y + P +EH++CMVDL
Sbjct: 581 KIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDL 640

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
             RAG L +AM+LIN  PF     +WRTL++  ++  N +   LA+++L+ L+P+D+ ++
Sbjct: 641 YSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAY 700

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           +L+SN+YA  G   E AKVR  M+  ++ KEAG SWIE+ +K   F+A    HP+S+ IY
Sbjct: 701 VLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIY 760

Query: 731 SKLDLLNDEMKLKVKDSSAF 750
            KL    +E+ +++KD+  +
Sbjct: 761 LKL----EELSIRLKDAGYY 776



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 176/634 (27%), Positives = 300/634 (47%), Gaps = 28/634 (4%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           +Q+LFD    +       L+  +  +   +  L +   + RS    +  + S +L+ C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
           L DRI G+Q+H   IK GF  +V VGTSL+ MY  +    + E VF  +  K+V     +
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           +  Y + G +E A  +F  +     +PN +TF  V+     +  VE+G Q+H + +K G+
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
              I VGN++V MY K  M  +A+ +FD++  RN +SW ++I+G+V +G   +A   F  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
               G+    +  ATVI  C+    +    QLH   IK+G   D+ + TAL+  Y+K  +
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 412 LKSA-RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
           +  A ++       +    + AI+SG+++    D    M LF Q R  G+ P+  T+S +
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDR--AMNLFCQMRREGVRPNHFTYSTI 402

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           L+ +A+    V    +HA  +KT Y     VG AL   Y+K G  + A +IF+ I ++DI
Sbjct: 403 LTANAA----VSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDI 458

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           V+W+AMLS YA  G  +GA+ +F ++ +EG  P++ +   VL AC     S      F+ 
Sbjct: 459 VAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHS 518

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMAN 648
                G    L   + +V +  + G + E+ N +         + W +++S         
Sbjct: 519 CSIKSGFSNALCVSSALVTMYAKRGNI-ESANEVFKRQVDRDLVSWNSMISGYAQHGCGK 577

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
               I    R  +LE  D  +FI V +     G+++E                 G  + +
Sbjct: 578 KSLKIFEEMRSKNLEL-DGITFIGVISACTHAGLVNE-----------------GQRYFD 619

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
           +  K +H V + + +    ++YS+  +L   M L
Sbjct: 620 LMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDL 653



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 187/360 (51%), Gaps = 7/360 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VR 122
           ++K+     ++   + +H  ++K+GS  D      L+  Y+K + +D A KLF  M  V+
Sbjct: 300 VIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQ 359

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + ++WT++I GY+ +G  +  + + C M R   + N  T S IL A + +       QIH
Sbjct: 360 NVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIH 415

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A  +K+ +EN+  VGT+L   Y   G   EA  +F  +  KD+   + M+  Y + G+ E
Sbjct: 416 ALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIE 475

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVC-YENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
            A  +F+ L     EPN++TF++V++ C      VE+GKQ H  ++K G    + V +A+
Sbjct: 476 GAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSAL 535

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           VTMY K G  E A  +F    +R+L+SW ++ISGY + G G K++  F E     +  D 
Sbjct: 536 VTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDG 595

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
                VI  C+    +  G +     +K +  +  +   + +VD+Y++ G L+ A  L++
Sbjct: 596 ITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLIN 655



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 242/479 (50%), Gaps = 16/479 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G ++ G  VH  ++KSG  +  F  N+++N+Y+K   +  A+ +FD M  R+A++W S+I
Sbjct: 207 GAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMI 266

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G++ +G       +   M     K  +   + +++ C+ +++  F +Q+H   IK+G +
Sbjct: 267 AGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSD 326

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGL----AYKDVRCVNFMILEYNKAGESEMAFHV 247
            ++ + T+L+  Y  S C  E ++ F+        ++V     +I  Y + G ++ A ++
Sbjct: 327 FDLNIKTALMVAY--SKC-SEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNL 383

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +      PN +T++ +++    N  V    Q+H L VK       SVG A+   Y K
Sbjct: 384 FCQMRREGVRPNHFTYSTILTA---NAAVSPS-QIHALVVKTNYENSPSVGTALSDSYSK 439

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G + EA ++F+ I E+++++W+A++SGY + G    A+  FL+    G+  +    ++V
Sbjct: 440 IGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSV 499

Query: 368 IDGCSV-CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++ C+   +++E G Q H  +IK G+ + + + +ALV +YAK G+++SA  +      + 
Sbjct: 500 LNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRD 559

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N+++SG+ +     +   + +F + R   +E D +TF  ++S       +  G+  
Sbjct: 560 LVSWNSMISGYAQHGCGKKS--LKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY 617

Query: 487 HAYSIKTGYAADVIVG-NALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
               +K  +    +   + ++ +Y++ G ++ A  +   +        W  +L+A  +H
Sbjct: 618 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 676


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/666 (33%), Positives = 367/666 (55%), Gaps = 2/666 (0%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +G  VH  ++K G   D    + L+ +YAK  RLD +  +F  +  ++ ++W+++I G +
Sbjct: 199 MGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCV 258

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            +      L +  +M       ++   + +  +C+ L     G+++H+ A+KS F +++ 
Sbjct: 259 QNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDII 318

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           VGT+ + MY   G   +A+ V   +    ++  N +I+ Y ++     A   F  LL + 
Sbjct: 319 VGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTG 378

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
              ++ T +  ++ C    G  EG+Q+HGLAVK   +  I V NAI+ MYGK     EA 
Sbjct: 379 LGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEAS 438

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +FD +  R+ +SW A+I+   ++G+  + +  F   +   +  D     +V+  C+   
Sbjct: 439 DLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQ 498

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L  G+++H   IK G   D  +G ALVD+Y K G ++ A  + D    K    +NAI+S
Sbjct: 499 ALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIIS 558

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           GF   +    ED    FS+    G+ PD  T++ +L   A+ A +  G+ +HA  IK   
Sbjct: 559 GF--SLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQEL 616

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +DV + + L+ MY+KCG++  +  +F+   +RD V+WNAML  YA HGLG+ AL LFE 
Sbjct: 617 QSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFES 676

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           M+     P+  + + VL+AC + GL + G+  F+ +   YGL P  EH++CMVD+LGR+G
Sbjct: 677 MQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSG 736

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           R+ EA+NL+   PF    ++WR L+SV K+  N + +  A++ LL L+P+D+ + +L+SN
Sbjct: 737 RIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSN 796

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +YA  GM    +++R  M   +L KE GCSWIE+  ++H F+   K HP  EEIY KL +
Sbjct: 797 IYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGV 856

Query: 736 LNDEMK 741
           L  EM+
Sbjct: 857 LIGEMQ 862



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 185/716 (25%), Positives = 325/716 (45%), Gaps = 60/716 (8%)

Query: 9   LLQPPFKSQQSLPPLKK--KVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVK 66
           LL   F S  ++P  KK   +P N FS   ++Q      I + S             + +
Sbjct: 10  LLTRLFFSYHAIPLFKKIPPIPTNNFSTLAQNQTQPPAKIRTFS------------HIYQ 57

Query: 67  ISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
                  L  G+  HA ++  G +  TF +N L+ +Y K   LD A K+FD M +R  ++
Sbjct: 58  ECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVS 117

Query: 127 -------------------------------WTSLIKGYLDDGDYESVLGIACDMYRSEE 155
                                          W S+I G+L +G+    + +  +M R   
Sbjct: 118 YNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGV 177

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
            F+  + +V+L+AC  LE+   G Q+H   +K GF+ +V  G++L+ MY       ++ +
Sbjct: 178 GFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLS 237

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  L  K+    + MI    +   +     +F  +       +   + ++   C     
Sbjct: 238 VFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSA 297

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           +  GK+LH  A+K     +I VG A + MY K G   +A+++  ++ + +L S+ A+I G
Sbjct: 298 LRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVG 357

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC-SVCSNLELGLQLHGFAIKHGYLS 394
           Y RS  G +A+  F   L  G+  D   L+  ++ C S+  +LE G Q+HG A+K   +S
Sbjct: 358 YARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLE-GRQVHGLAVKSISMS 416

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           ++ +  A++D+Y K   L  A  L D    +    +NAI++   +    +EE+ +  F+ 
Sbjct: 417 NICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQN--GNEEETLAHFAS 474

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
              + MEPD  T+  +L   A +  L  G  +H   IK+G   D  VG AL+ MY KCG 
Sbjct: 475 MIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGM 534

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           I+ A +I      + +VSWNA++S ++L    + A   F  M   G  PD+ +   VL  
Sbjct: 535 IEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDT 594

Query: 575 CIYSGLSEGGICLFNEIE-QIYGLRPILEHFAC--MVDLLGRAGRLSEAMNLINSSPFSE 631
           C  + L+  G  L  +I  QI       + + C  +VD+  + G + ++  +   +P + 
Sbjct: 595 C--ANLATVG--LGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP-NR 649

Query: 632 SPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDE 685
             + W  ++       +      +  S +L++++P  A +F+ V    A  G++D+
Sbjct: 650 DFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHA-TFVSVLRACAHMGLVDK 704



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 238/476 (50%), Gaps = 10/476 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG+ +H+  LKS   +D       +++YAK  R+  AQK+   M   S  ++ ++I G
Sbjct: 298 LRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVG 357

Query: 134 YL-DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           Y   D  ++++      + ++   F+E T S  L AC+ +   + G Q+H  A+KS   +
Sbjct: 358 YARSDRGFQALKSFQL-LLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMS 416

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N+ V  +++ MY       EA ++F  +  +D    N +I    + G  E     F  ++
Sbjct: 417 NICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMI 476

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S  EP+D+T+ +V+  C     +  G ++H   +K G+  +  VG A+V MY K GM E
Sbjct: 477 HSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIE 536

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A+++ D   ++ ++SW A+ISG+        A   F   L++G+  D+   A V+D C+
Sbjct: 537 KADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCA 596

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             + + LG Q+H   IK    SDV + + LVD+Y+K G+++ ++++ +    +    +NA
Sbjct: 597 NLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNA 656

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI- 491
           +L G+        E+ + LF   +L  ++P+  TF  +L   A    + +G  LH + + 
Sbjct: 657 MLCGYAHHGLG--EEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKG--LHYFDVM 712

Query: 492 --KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
             + G        + ++ +  + G ID A  + + +  + D V W  +LS   +HG
Sbjct: 713 LSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHG 768



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 225/448 (50%), Gaps = 23/448 (5%)

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
           +R++   N+I++ Y   G  + A + F  + ER+++SW ++ISG++++G   K+I+ FLE
Sbjct: 112 LRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLE 171

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
               G+  D + LA V+  C      ++G+Q+HG  +K G+  DV  G+AL+ +YAK   
Sbjct: 172 MGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKR 231

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           L  +  +      K    ++A+++G ++   D   + + LF + +  G+      ++ L 
Sbjct: 232 LDDSLSVFSELPEKNWVSWSAMIAGCVQN--DRNVEGLELFKEMQGVGVGVSQSIYASLF 289

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
              A+ + L  G+ LH++++K+ + +D+IVG A + MYAKCG +  A ++   +    + 
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ 349

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNE 590
           S+NA++  YA    G  AL  F+ + + G   D+I++ G L AC    G  EG       
Sbjct: 350 SYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEG------- 402

Query: 591 IEQIYGL--RPILEHFAC----MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
             Q++GL  + I     C    ++D+ G+   L+EA +L +     ++ + W  +++  +
Sbjct: 403 -RQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDA-VSWNAIIAACE 460

Query: 645 LMANSKFSI--LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM--NDLRLSK 700
              N + ++   AS     +EP D  ++  V    AG+  L+   ++ T +  + +    
Sbjct: 461 QNGNEEETLAHFASMIHSRMEPDDF-TYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDS 519

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEE 728
             G + +++  K      + K H  +E+
Sbjct: 520 FVGAALVDMYCKCGMIEKADKIHDRTEQ 547



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 129/275 (46%), Gaps = 12/275 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G   L  G  +H  ++KSG   D+F    L+++Y K   ++ A K+ D    ++
Sbjct: 490 VLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKT 549

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W ++I G+      E        M       +  T + +L+ C+ L     G+QIHA
Sbjct: 550 MVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHA 609

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             IK   +++V++ ++L+ MY   G  ++++ +F     +D    N M+  Y   G  E 
Sbjct: 610 QIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEE 669

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV---KFGVVREISVGNA 300
           A  +F  +   + +PN  TF +V+  C     V++G  LH   V   ++G+  +    + 
Sbjct: 670 ALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKG--LHYFDVMLSEYGLDPQSEHYSC 727

Query: 301 IVTMYGKHGMSEEAERMF-------DAISERNLIS 328
           +V + G+ G  +EA  +        DA+  RNL+S
Sbjct: 728 MVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLS 762


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/711 (31%), Positives = 388/711 (54%), Gaps = 10/711 (1%)

Query: 33  SPNPKSQVAYLCSISSVSCSERTL-LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQN 91
           S +P   V +  S+  V     ++ L N +P + K+S    +++L +++H ++ +    +
Sbjct: 208 SEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLS----NIELCRSIHGYVFRRDFSS 263

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
               +N LI+LY+K   +DVA+++FD M+ +  ++W +++ GY  +G +  VL +   M 
Sbjct: 264 AV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 321

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
               + N+ +      A +   D   G++IH  A++   ++++ V T L+ MY   G   
Sbjct: 322 LGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETE 381

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           +A+ +F GL  +D+   + +I    + G  E A  +F  + +   +PN  T  +++  C 
Sbjct: 382 KAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACA 441

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
           +   ++ GK +H   VK  +  ++S G A+V+MY K G    A   F+ +S R++++W +
Sbjct: 442 DLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNS 501

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           LI+GY + G    AI+ F +     I  D+  +  V+  C++ ++L+ G  +HG  +K G
Sbjct: 502 LINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLG 561

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAILSGFMEKIADDEEDVMV 450
           + SD  +  AL+D+YAK G L SA  L +     K    +N I++ +M+      ++ + 
Sbjct: 562 FESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN--GHAKEAIS 619

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
            F Q RL    P+ VTF  +L  +A  A    G + HA  I+ G+ ++ +VGN+LI MYA
Sbjct: 620 SFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 679

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG +D + ++F  +  +D VSWNAMLS YA+HG G  A+ LF  M+      D +S + 
Sbjct: 680 KCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVS 739

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC ++GL E G  +F+ +   Y ++P LEH+ACMVDLLGRAG   E +  I   P  
Sbjct: 740 VLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE 799

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
               +W  L+   ++ +N K   +A   L+ LEP++   F+++S++YA  G   +A K R
Sbjct: 800 PDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKAR 859

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           + MNDL L K  GCSW+E+ +K+H F    K HP+ E ++   + L ++M+
Sbjct: 860 SKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKME 910



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 164/612 (26%), Positives = 298/612 (48%), Gaps = 31/612 (5%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA ++ SG ++      +LINLY+ F++ D+A+ +FD     S I W S+I+ Y     
Sbjct: 51  IHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
           Y   L +   M     + +++T + +L+AC+   +   G   H    + G E +VF+G  
Sbjct: 110 YNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAG 169

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ MY   G  + A  VF  +  +DV   N MI   +++ +   A   F  +     EP+
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS--VGNAIVTMYGKHGMSEEAERM 317
             +  N+     +   +E  + +HG   +    R+ S  V N ++ +Y K G  + A R+
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFR----RDFSSAVSNGLIDLYSKCGDVDVARRV 285

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV-IDGCSVCS- 375
           FD + +++ +SW  +++GY  +G        F+E L+L    D   L  V I+  S  S 
Sbjct: 286 FDQMVDQDDVSWGTMMAGYAHNG-------CFVEVLEL---FDKMKLGNVRINKVSAVSA 335

Query: 376 --------NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
                   +LE G ++HG A++    SD+ + T L+ +YAK G+ + A+ L  G   +  
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDL 395

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             ++AI++  ++      E+ + LF + +   M+P+ VT   +L   A  + L  G+S+H
Sbjct: 396 VAWSAIIAALVQ--TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            +++K    +D+  G AL++MYAKCG    A   F  +S RDIV+WN++++ YA  G   
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            A+ +F +++     PD  +++GV+ AC      + G C+   I ++ G          +
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNAL 572

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           +D+  + G L  A  L N + F++  + W  +++      ++K +I +S   + LE    
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI-SSFHQMRLENFHP 631

Query: 668 GSFILVSNMYAG 679
            S   VS + A 
Sbjct: 632 NSVTFVSVLPAA 643



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 275/569 (48%), Gaps = 19/569 (3%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMY--FHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           QIHA  I SGF+++  + T LI++Y  FH      A +VF           N MI  Y +
Sbjct: 50  QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDL--ARSVFDSTPNPSRILWNSMIRAYTR 106

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           + +   A  ++  ++    EP+ YTFT V+  C   L ++EG   HG   + G+ R++ +
Sbjct: 107 SKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFI 166

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G  +V MY K G  + A  +FD + +R++++W A+I+G  +S    +A++ F     +G+
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV 226

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
              S  L  +  G    SN+EL   +HG+  +  + S V  G  L+D+Y+K GD+  AR 
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARR 284

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    +    +  +++G+       E  V+ LF + +L  +  + V+       +A  
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNGCFVE--VLELFDKMKLGNVRINKVSAVSAFLAAAET 342

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L +G+ +H  +++    +D++V   L+ MYAKCG  + A Q+F G+  RD+V+W+A++
Sbjct: 343 IDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAII 402

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +A    G  + AL LF+EM+ +   P+ ++++ +L AC    L + G  +     +   +
Sbjct: 403 AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA-DM 461

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN--SKFSILA 655
              L     +V +  + G  + A+   N    S   + W +L++    + +  +   +  
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLINGYAQIGDPYNAIDMFY 520

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
             RL  + P DAG+ + V    A    LD+   +   +  ++L  E+ C    + + L  
Sbjct: 521 KLRLSAINP-DAGTMVGVVPACALLNDLDQGTCIHGLI--VKLGFESDC---HVKNALID 574

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKLKV 744
             A     P +E +++K D   DE+   V
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/670 (34%), Positives = 377/670 (56%), Gaps = 5/670 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+A+HA ++KS S +  + AN+L+NLYAK  RL  A+ +F+ +  +  ++W  +I G
Sbjct: 22  LQKGKALHAQIIKS-SSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIING 80

Query: 134 YLDDGDYES--VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           Y   G   S  V+ +   M       N HT + +  A S L D   G   HA AIK    
Sbjct: 81  YSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSC 140

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VFVG+SL++MY  +G   EA  VF  +  ++      MI  Y     +  A  +F  +
Sbjct: 141 RDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLM 200

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
              +   N++ FT+V+S       V  GKQ+H +AVK G++  +SVGNA+VTMY K G  
Sbjct: 201 RREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSL 260

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A + F+  S++N I+W+A+I+GY +SG   KA+  F      GI         VI+ C
Sbjct: 261 DDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINAC 320

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S       G Q+H + +K G+ S + + TALVD+YAK   +  AR   D         + 
Sbjct: 321 SDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWT 380

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           +++ G+++    + ED + L+ +  + G+ P+ +T + +L   +S A L +G+ +HA ++
Sbjct: 381 SMIGGYVQN--GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTV 438

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+  +V +G+AL TMYAKCG +     +F+ +  RD++SWNAM+S  + +G GK AL 
Sbjct: 439 KYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALE 498

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LFEEM+ EG  PD ++ + +L AC + GL E G   F  +   +G+ P +EH+ACMVD+L
Sbjct: 499 LFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDIL 558

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG+L EA+    S+       LWR ++   +   N +    A ++L++L  +++ +++
Sbjct: 559 SRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYV 618

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+S++Y+  G  ++  +VR  M    +SKE GCSWIE+ S +H FV   + HP+  +I+ 
Sbjct: 619 LLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHV 678

Query: 732 KLDLLNDEMK 741
           +L  L+ +MK
Sbjct: 679 ELRQLSKQMK 688



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 7/321 (2%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P++ +F   +     N  +++GK LH   +K      + + N++V +Y K     EA+ +
Sbjct: 4   PSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFV 62

Query: 318 FDAISERNLISWTALISGYVRSGHGGKA--INGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           F+ I  ++++SW  +I+GY + G  G +  +  F          ++   A V    S   
Sbjct: 63  FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLV 122

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +   G   H  AIK     DV +G++L+++Y K G    AR + D    + +  +  ++S
Sbjct: 123 DAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMIS 182

Query: 436 GFM-EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           G+  +K+A    + + LF   R      +   F+ +LS       +  G+ +H  ++K G
Sbjct: 183 GYASQKLA---AEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 239

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             + V VGNAL+TMYAKCGS+D A Q F+  SD++ ++W+AM++ YA  G    AL LF 
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFS 299

Query: 555 EMKREGFAPDDISILGVLQAC 575
            M   G  P + + +GV+ AC
Sbjct: 300 SMHLSGIRPSEFTFVGVINAC 320


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/681 (32%), Positives = 376/681 (55%), Gaps = 2/681 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K    + DL LG+ VH  ++ +G  +D F AN+L+ LYAK      A+ LFD + 
Sbjct: 13  FPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIP 72

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            RS ++W +L   Y+    +   + +  DM  S  + NE + S ++  C+ LED + G +
Sbjct: 73  DRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRK 132

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH + IK G++++ F   +L+ MY   G   +A +VF  +A  D+   N +I        
Sbjct: 133 IHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEY 192

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A  +   +  S   PN +T ++ +  C      E G+QLH   +K  +  +  +G  
Sbjct: 193 HHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG 252

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K    ++A  +F  + ER++I+W A+ISG+ ++    +A + F      GI  +
Sbjct: 253 LIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFN 312

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            + L+TV+   +      +  Q+H  ++K G+  D  +  +L+D Y K G ++ A  + +
Sbjct: 313 QTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFE 372

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                    F ++++ + +    +E   + L  Q R  G++PD    S LL+  AS +  
Sbjct: 373 ESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDR--GIKPDSFVCSSLLNACASLSAY 430

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            +G+ +H + +K G+ +D+  GN+L+ MYAKCGSI+ A   F  I  R IVSW+AM+   
Sbjct: 431 EQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGL 490

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           A HG GK AL LF++M + G  P+ I+++ VL AC ++GL       FN ++ ++G+ P+
Sbjct: 491 AQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPM 550

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
            EH+ACM+DLLGRAG+L  AM L+N  PF  + L+W  L+  +++  N      A++ LL
Sbjct: 551 QEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLL 610

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
            LEP+ +G+ +L++N+YA  GM D+ A+VR  M D ++ KE G SW+E+  K++ F+   
Sbjct: 611 ALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGD 670

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
           + H  S EIY+KLD L+D +K
Sbjct: 671 RSHSRSTEIYAKLDELSDLLK 691



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 262/505 (51%), Gaps = 21/505 (4%)

Query: 143 VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLIS 202
           +LGI C         NE     +L+AC++ +D + G+Q+H   + +GF+++ FV  SL+ 
Sbjct: 3   LLGIKC---------NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVI 53

Query: 203 MYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYT 262
           +Y   G F +A ++F  +  + V   N +   Y  +     A  +F  ++ S   PN+++
Sbjct: 54  LYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFS 113

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
            +++I+VC       +G+++HG  +K G   +    NA+V MY K G+ E+A  +FD I+
Sbjct: 114 LSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA 173

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           + +++SW A+I+G V   +  +A+    E    G+C +   L++ +  C+  +  ELG Q
Sbjct: 174 KPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQ 233

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           LH   IK    SD  LG  L+D+Y+K   +  AR++      +    +NA++SG  +   
Sbjct: 234 LHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQN-- 291

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYSIKTGYAADVIV 501
           +++E+   LF      G+  +  T S +L S++A QA  +  R +HA S+K+G+  D  V
Sbjct: 292 EEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYM-CRQIHALSLKSGFEFDNYV 350

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            N+LI  Y KCG ++ A ++F+     D+V + ++++AYA  G G+ AL L+ EM+  G 
Sbjct: 351 VNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGI 410

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            PD      +L AC      E G  +   I + +G    +     +V++  + G + +A 
Sbjct: 411 KPDSFVCSSLLNACASLSAYEQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDA- 468

Query: 622 NLINSSPFSESPLLWRTLVSVSKLM 646
               S  FS  P+  R +VS S ++
Sbjct: 469 ----SCAFSRIPV--RGIVSWSAMI 487


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 260/795 (32%), Positives = 398/795 (50%), Gaps = 83/795 (10%)

Query: 13  PFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCS-----ERTLLFNDWPQ---- 63
           PF S Q+ P  KK     TFS      +   CS     C       R +L    P     
Sbjct: 31  PFSSYQATPTKKK-----TFS-----HIFQECSDRKALCPGKQAHARMILTEFKPTVFVT 80

Query: 64  --LVKISIGSGDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
             L+++ I   DL+      AF +  G  Q DT   N ++  YA    + VAQKLFD M 
Sbjct: 81  NCLIQMYIKCSDLEF-----AFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP 135

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  ++W SLI GYL +GD+  V+ +   M R    F+  T +V+L++CS LED   G Q
Sbjct: 136 ERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQ 195

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH  A+K GF+ +V  G++L+ MY        +   F  +  K+    + +I    +  +
Sbjct: 196 IHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDD 255

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
                 +F  +  +    +  TF +V   C     +  G QLHG A+K     ++ +G A
Sbjct: 256 LRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTA 315

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG--------------GKAI 346
            + MY K     +A+++F+++   NL S+ A+I GY RS  G                 I
Sbjct: 316 TLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVI 375

Query: 347 NGFLEFLDL------GICCDSSCLATVI-----------DGCSVCSNL------------ 377
            G LE L +       +C  + C+A  I           + C V   +            
Sbjct: 376 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAII 435

Query: 378 -----------ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
                       L L +H   IK     D  +G AL+D+Y+K G ++ A  L D  + + 
Sbjct: 436 AAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 495

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +NAI+SGF   +    E+    FS+    G++PD  T++ +L   A+   +  G+ +
Sbjct: 496 VVSWNAIISGF--SLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQI 553

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HA  IK    +D  + + L+ MY+KCG++     IF+   +RD V+WNAM+  YA HGLG
Sbjct: 554 HAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLG 613

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           + AL +FE M+ E   P+  + L VL+AC + GL E G+  F+ +   YGL P LEH++C
Sbjct: 614 EEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSC 673

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           +VD++GR+G++S+A+ LI   PF    ++WRTL+S+ K+  N + +  A+  +L LEP+D
Sbjct: 674 VVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPED 733

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
           + +++L+SN+YA  GM +E  K+R  M    L KE GCSWIEI S++H F+   K HP S
Sbjct: 734 SAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRS 793

Query: 727 EEIYSKLDLLNDEMK 741
           +EIY  LD+L DEMK
Sbjct: 794 KEIYENLDVLTDEMK 808


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/630 (33%), Positives = 355/630 (56%), Gaps = 3/630 (0%)

Query: 113 QKLFDGMLVRS-AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           Q  F    +R+ A+ W   I GY+ +G +   L +   M R+    ++     +++AC  
Sbjct: 73  QTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGS 132

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
             D   G ++H   I  GFE++V VGT+L SMY   G    A  VF  +  +DV   N +
Sbjct: 133 QSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAI 192

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           I  Y++ G+   A  +F  +  +  +PN  T  +V+ VC   L +E+GKQ+H  A++ G+
Sbjct: 193 IAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI 252

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
             ++ V N +V MY K G    A ++F+ +  R++ SW A+I GY  +    +A+  F  
Sbjct: 253 ESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNR 312

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
               GI  +S  + +V+  C+    LE G Q+HG+AI+ G+ S+  +G ALV++YAK G+
Sbjct: 313 MQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGN 372

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           + SA  L +    K    +NAI+SG+ +       + + LF + +  G++PD      +L
Sbjct: 373 VNSAYKLFERMPKKNVVAWNAIISGYSQH--GHPHEALALFIEMQAQGIKPDSFAIVSVL 430

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
              A    L +G+ +H Y+I++G+ ++V+VG  L+ +YAKCG+++ A ++F+ + ++D+V
Sbjct: 431 PACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVV 490

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           SW  M+ AY +HG G+ AL LF +M+  G   D I+   +L AC ++GL + G+  F  +
Sbjct: 491 SWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCM 550

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
           +  YGL P LEH+AC+VDLLGRAG L EA  +I +        +W  L+   ++  N + 
Sbjct: 551 KSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIEL 610

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
              A+K L +L+P +AG ++L+SN+YA     ++ AK+R  M +  + K+ GCS + +  
Sbjct: 611 GEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHR 670

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            +  F+   + HP+SE+IY+ L++L ++M+
Sbjct: 671 DVQTFLVGDRTHPQSEQIYAMLEILYEQMR 700



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 250/483 (51%), Gaps = 6/483 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K      DL+ G+ VH  ++  G ++D      L ++Y K   L+ A+++FD M  R 
Sbjct: 126 VIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRD 185

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W ++I GY  +G     L +  +M  +  K N  T   ++  C+ L     G+QIH 
Sbjct: 186 VVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHC 245

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           +AI+SG E++V V   L++MY   G    A  +F  +  +DV   N +I  Y+   +   
Sbjct: 246 YAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHE 305

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A   F  +     +PN  T  +V+  C     +E+G+Q+HG A++ G      VGNA+V 
Sbjct: 306 ALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVN 365

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G    A ++F+ + ++N+++W A+ISGY + GH  +A+  F+E    GI  DS  
Sbjct: 366 MYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFA 425

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           + +V+  C+    LE G Q+HG+ I+ G+ S+V +GT LVDIYAK G++ +A+ L +   
Sbjct: 426 IVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP 485

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +  ++  +   I    ED + LFS+ +  G + D + F+ +L+ + S A LV  
Sbjct: 486 EQDVVSWTTMILAY--GIHGHGEDALALFSKMQETGTKLDHIAFTAILT-ACSHAGLVDQ 542

Query: 484 RSLHAYSIKTGY--AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAY 540
              +   +K+ Y  A  +     L+ +  + G +D A  I K +S + D   W A+L A 
Sbjct: 543 GLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGAC 602

Query: 541 ALH 543
            +H
Sbjct: 603 RIH 605


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/669 (33%), Positives = 357/669 (53%), Gaps = 3/669 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD-GMLVRSAITWTSLI 131
           D +LG  VHA  + +G  +D F AN L+ +Y  F  +D A+++FD     R+A++W  L+
Sbjct: 115 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 174

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y+ +      + +  +M  S  +  E   S ++ AC+   +   G Q+HA  ++ G+E
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 234

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VF   +L+ MY   G    A  +F  +   DV   N +I      G    A  + + +
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            SS   PN +  ++++  C      + G+Q+HG  +K     +  +G  +V MY K+   
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A ++FD +S R+LI W ALISG    G   +A + F      G+  + + LA V+   
Sbjct: 355 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 414

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +         Q+H  A K G++ D  +   L+D Y K   L  A  + +  S        
Sbjct: 415 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 474

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           ++++   +   D  E  + LF +    G+EPDP   S LL+  AS +   +G+ +HA+ I
Sbjct: 475 SMITALSQ--CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K  + +D   GNAL+  YAKCGSI+ A   F  + +R +VSW+AM+   A HG GK AL 
Sbjct: 533 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 592

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF  M  EG  P+ I++  VL AC ++GL +     FN +++++G+    EH++CM+DLL
Sbjct: 593 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLL 652

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAG+L +AM L+NS PF  +  +W  L+  S++  + +   LA+++L  LEP+ +G+ +
Sbjct: 653 GRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHV 712

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L++N YA  GM +E AKVR  M D  + KE   SW+E+  K+H F+   K HP ++EIYS
Sbjct: 713 LLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYS 772

Query: 732 KLDLLNDEM 740
           KLD L D M
Sbjct: 773 KLDELGDLM 781



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 157/503 (31%), Positives = 260/503 (51%), Gaps = 14/503 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEA---NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           G  +HA LLKSG     F A   N+LI+ Y+K  R   A+++FD +     ++W+SL+  
Sbjct: 23  GAHLHANLLKSG-----FLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTA 77

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y ++G   S +     M       NE    V+L+    + D   G Q+HA A+ +GF ++
Sbjct: 78  YSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSD 134

Query: 194 VFVGTSLISMYFHSGCFREAENVF-RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           VFV  +L++MY   G   +A  VF    + ++    N ++  Y K  +   A  VF  ++
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S  +P ++ F+ V++ C  +  ++ G+Q+H + V+ G  +++   NA+V MY K G  +
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVD 254

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +F+ + + +++SW ALISG V +GH  +AI   L+    G+  +   L++++  C+
Sbjct: 255 IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACA 314

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
                +LG Q+HGF IK    SD  +G  LVD+YAK   L  A  + D  S +    +NA
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNA 374

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++SG       DE     +F   R  G+  +  T + +L  +AS       R +HA + K
Sbjct: 375 LISGCSHGGRHDE--AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEK 432

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G+  D  V N LI  Y KC  +  A ++F+  S  DI++  +M++A +    G+GA+ L
Sbjct: 433 IGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKL 492

Query: 553 FEEMKREGFAPDDISILGVLQAC 575
           F EM R+G  PD   +  +L AC
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNAC 515



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 231/483 (47%), Gaps = 6/483 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +V    GS ++  G+ VHA +++ G + D F AN L+++Y K  R+D+A  +F+ M    
Sbjct: 208 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 267

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W +LI G + +G     + +   M  S    N    S IL+AC+       G QIH 
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 327

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           F IK+  +++ ++G  L+ MY  +    +A  VF  ++++D+   N +I   +  G  + 
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 387

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           AF +F  L       N  T   V+            +Q+H LA K G + +  V N ++ 
Sbjct: 388 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 447

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K     +A R+F+  S  ++I+ T++I+   +  HG  AI  F+E L  G+  D   
Sbjct: 448 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 507

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L+++++ C+  S  E G Q+H   IK  ++SD   G ALV  YAK G ++ A +      
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 567

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    ++A++ G  +      +  + LF +    G+ P+ +T + +L  + + A LV  
Sbjct: 568 ERGVVSWSAMIGGLAQH--GHGKRALELFGRMVDEGINPNHITMTSVLC-ACNHAGLVDE 624

Query: 484 RSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAY 540
              +  S+K  +  D    +   +I +  + G +D A ++   +  +   S W A+L A 
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGAS 684

Query: 541 ALH 543
            +H
Sbjct: 685 RVH 687



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 182/372 (48%), Gaps = 26/372 (6%)

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G  LH   +K G +   S+ N +++ Y K      A R+FD I +   +SW++L++ Y  
Sbjct: 23  GAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G    AI  F      G+CC+   L  V+       + +LG Q+H  A+  G+ SDV +
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVL---KCVPDAQLGAQVHAMAMATGFGSDVFV 137

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTA-EFNAILSGFMEKIADDEEDVMVLFSQQRL 457
             ALV +Y   G +  AR + D    +  A  +N ++S +++   D   D + +F +   
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN--DQCGDAIQVFGEMVW 195

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G++P    FS +++       +  GR +HA  ++ GY  DV   NAL+ MY K G +D 
Sbjct: 196 SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDI 255

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  IF+ + D D+VSWNA++S   L+G    A+ L  +MK  G  P+   +  +L+AC  
Sbjct: 256 ASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAG 315

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFA--------CMVDLLGRAGRLSEAMNLINSSPF 629
           +G        F+   QI+G   +++  A         +VD+  +   L +AM + +    
Sbjct: 316 AG-------AFDLGRQIHGF--MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH 366

Query: 630 SESPLLWRTLVS 641
            +  +LW  L+S
Sbjct: 367 RD-LILWNALIS 377



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 2/108 (1%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T S+ L+  A+   L+ G  LHA  +K+G+ A +   N LI+ Y+KC     A ++F  I
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEI 63

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            D   VSW+++++AY+ +GL + A+  F  M+ EG   ++ ++  VL+
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK 111


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/664 (32%), Positives = 366/664 (55%), Gaps = 2/664 (0%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +G+ +HA + K GS  +T+  N L+ LY++      A+K+F  M  +  +++ SLI G  
Sbjct: 231 VGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLA 290

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
             G  +  L +   M R   K +  T + +L AC+       GEQ+H++ IK+G  +++ 
Sbjct: 291 QQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMI 350

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  +L+ +Y +    + A  +F     ++V   N M++ + K      +F +F  +    
Sbjct: 351 VEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKG 410

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             PN +T+ +++  C     ++ G+Q+H   +K G    + V + ++ MY KHG  + A 
Sbjct: 411 LIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAH 470

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +   ++E +++SWTALISGY +     +A+  F E L+ GI  D+   ++ I  C+   
Sbjct: 471 VILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQ 530

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L  G Q+H  +   GY  D+ +G ALV +YA+ G +K A +  +    K +  +N ++S
Sbjct: 531 ALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLIS 590

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           GF +  +   ED + +F+Q   A +E    TF   +S +A+ A + +G+ +HA  IK G+
Sbjct: 591 GFAQ--SGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGF 648

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +D+ V NALIT YAKCGSI+ A + F  + +++ VSWNAM++ Y+ HG G  A+ LFE+
Sbjct: 649 DSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEK 708

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           MK+ G  P+ ++ +GVL AC + GL   G+  F  + + +GL P   H+AC+VDL+ RAG
Sbjct: 709 MKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAG 768

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
            LS A   I   P      +WRTL+S   +  N +    A++ LL+LEP+D+ +++L+SN
Sbjct: 769 FLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSN 828

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           MYA  G  D   + R  M +  + KE G SWIE+ + +H F    + HP +++IY  L  
Sbjct: 829 MYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAE 888

Query: 736 LNDE 739
           LN +
Sbjct: 889 LNKK 892



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 171/566 (30%), Positives = 272/566 (48%), Gaps = 20/566 (3%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ + + SG L   + +H  +LK G  N++   N L+++Y     LD   K+F+ M  RS
Sbjct: 16  LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRS 75

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI---FGEQ 180
             +W  +I G+++      VL +   M        E + + +L ACS    RI   + EQ
Sbjct: 76  VRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACS--GHRIGIRYAEQ 133

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA  I  G   +  +   LI +Y  +G    A  VF  L  KD      MI  +++ G 
Sbjct: 134 IHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGY 193

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A H+F  + ++   P  Y F++V+S C +    + G+QLH L  K+G   E  V NA
Sbjct: 194 EEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNA 253

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +VT+Y +      AE++F  +  ++ +S+ +LISG  + G    A+  F +     +  D
Sbjct: 254 LVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPD 313

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              +A+++  C+    L  G QLH + IK G  SD+ +  AL+D+Y    D+K+A  +  
Sbjct: 314 CVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFL 373

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               +    +N +L  F +   D+  +   +F Q ++ G+ P+  T+  +L    S   L
Sbjct: 374 TAQTENVVLWNVMLVAFGK--LDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGAL 431

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G  +H   IKTG+  +V V + LI MYAK G +D A  I + +++ D+VSW A++S Y
Sbjct: 432 DLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGY 491

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY----- 595
           A H L   AL  F+EM   G   D+I     + AC        GI   N+  QI+     
Sbjct: 492 AQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISAC-------AGIQALNQGRQIHAQSYV 544

Query: 596 -GLRPILEHFACMVDLLGRAGRLSEA 620
            G    L     +V L  R GR+ EA
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRIKEA 570



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 248/485 (51%), Gaps = 2/485 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++  + +HA ++  G       +N LI LYAK   +  A+K+FD +  + +++W ++I G
Sbjct: 128 IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISG 187

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +  +G  E  + + C+M+ +      +  S +L  C+ ++    GEQ+HA   K G    
Sbjct: 188 FSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE 247

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            +V  +L+++Y     F  AE VF  +  KD    N +I    + G S+ A  +F  +  
Sbjct: 248 TYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR 307

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +P+  T  +++S C  N  + +G+QLH   +K G+  ++ V  A++ +Y      + 
Sbjct: 308 DYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKT 367

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  MF      N++ W  ++  + +  +  ++   F +    G+  +     +++  C+ 
Sbjct: 368 AHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTS 427

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L+LG Q+H   IK G+  +V + + L+D+YAK G L +A ++L   +      + A+
Sbjct: 428 VGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTAL 487

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SG+ +   +   + +  F +    G++ D + FS  +S  A    L +GR +HA S  +
Sbjct: 488 ISGYAQH--NLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS 545

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY+ D+ +GNAL+++YA+CG I  A+  F+ I  +D +SWN ++S +A  G  + AL +F
Sbjct: 546 GYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVF 605

Query: 554 EEMKR 558
            +M R
Sbjct: 606 AQMNR 610



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 230/464 (49%), Gaps = 5/464 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +++H   +K GF N   +   L+ +YF  G       VF  +  + VR  + +I  + + 
Sbjct: 30  KKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEK 89

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY-ENLGVEEGKQLHGLAVKFGVVREISV 297
             S     +F  ++  +  P + +F +V+  C    +G+   +Q+H   +  G++    +
Sbjct: 90  KMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPII 149

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N ++ +Y K+G+   A ++FD +  ++ +SW A+ISG+ ++G+  +AI+ F E    GI
Sbjct: 150 SNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGI 209

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
                  ++V+ GC+     ++G QLH    K+G   +  +  ALV +Y++  +  SA  
Sbjct: 210 FPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEK 269

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +      K    FN+++SG  ++   D    + LF++ +   ++PD VT + LLS  AS 
Sbjct: 270 VFSKMQSKDEVSFNSLISGLAQQGFSD--GALELFTKMKRDYLKPDCVTVASLLSACASN 327

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L +G  LH+Y IK G ++D+IV  AL+ +Y  C  I  A ++F      ++V WN ML
Sbjct: 328 GALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVML 387

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            A+        +  +F +M+ +G  P+  +   +L+ C   G  + G  +  ++ +  G 
Sbjct: 388 VAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKT-GF 446

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +  +   + ++D+  + G+L  A ++I  +   +  + W  L+S
Sbjct: 447 QFNVYVCSVLIDMYAKHGKLDTA-HVILRTLTEDDVVSWTALIS 489



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 210/432 (48%), Gaps = 10/432 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++     G L LG+ +H  ++K+G Q + +  + LI++YAK  +LD A  +   + 
Sbjct: 418 YPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT 477

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               ++WT+LI GY     +   L    +M     + +    S  + AC+ ++    G Q
Sbjct: 478 EDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQ 537

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA +  SG+  ++ +G +L+S+Y   G  +EA   F  +  KD    N +I  + ++G 
Sbjct: 538 IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGY 597

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VF  +  +  E + +TF + +S       +++GKQ+H + +K G   +I V NA
Sbjct: 598 CEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNA 657

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++T Y K G  E+A R F  + E+N +SW A+I+GY + G+G +A+N F +   +G   +
Sbjct: 658 LITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPN 717

Query: 361 SSCLATVIDGCSVCSNLELGL-QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    +  GL      + +HG +        +VD+ ++ G L  AR  +
Sbjct: 718 HVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFI 777

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMV-LFSQQRLAGMEPDP----VTFSRLLSLS 474
           +    +   E +A +   +       ++V V  F+ Q L  +EP+     V  S + ++S
Sbjct: 778 E----EMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVS 833

Query: 475 ASQACLVRGRSL 486
               C  + R +
Sbjct: 834 GKWDCRDQTRQM 845



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 164/329 (49%), Gaps = 7/329 (2%)

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           N  T+  ++ +C  +  + E K+LHG  +K G   E  + N +V +Y   G  +   ++F
Sbjct: 9   NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS-NL 377
           + +  R++ SW  +ISG++      + ++ F   ++  +       A+V+  CS     +
Sbjct: 69  EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI 128

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
               Q+H   I HG L    +   L+ +YAK G + SAR + D    K +  + A++SGF
Sbjct: 129 RYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGF 188

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +     EE+ + LF +   AG+ P P  FS +LS          G  LHA   K G + 
Sbjct: 189 SQN--GYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSL 246

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           +  V NAL+T+Y++  +   A ++F  +  +D VS+N+++S  A  G   GAL LF +MK
Sbjct: 247 ETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMK 306

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGIC 586
           R+   PD +++  +L AC     S G +C
Sbjct: 307 RDYLKPDCVTVASLLSACA----SNGALC 331



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 10/243 (4%)

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           GIC +      ++D C    +L    +LHG  +K G+ ++  L   LVD+Y   GDL   
Sbjct: 5   GICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGV 64

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             + +    +    ++ I+SGFMEK   +   V+ LFS      + P  ++F+ +L   +
Sbjct: 65  VKVFEDMPNRSVRSWDKIISGFMEKKMSNR--VLDLFSCMIEENVSPTEISFASVLRACS 122

Query: 476 SQACLVR-GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
                +R    +HA  I  G     I+ N LI +YAK G I  A ++F  +  +D VSW 
Sbjct: 123 GHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWV 182

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM+S ++ +G  + A+ LF EM   G  P       VL  C         I LF+  EQ+
Sbjct: 183 AMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCT-------KIKLFDVGEQL 235

Query: 595 YGL 597
           + L
Sbjct: 236 HAL 238


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/669 (33%), Positives = 357/669 (53%), Gaps = 3/669 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD-GMLVRSAITWTSLI 131
           D +LG  VHA  + +G  +D F AN L+ +Y  F  +D A+++FD     R+A++W  L+
Sbjct: 22  DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y+ +      + +  +M  S  +  E   S ++ AC+   +   G Q+HA  ++ G+E
Sbjct: 82  SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 141

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VF   +L+ MY   G    A  +F  +   DV   N +I      G    A  + + +
Sbjct: 142 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 201

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            SS   PN +  ++++  C      + G+Q+HG  +K     +  +G  +V MY K+   
Sbjct: 202 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 261

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A ++FD +S R+LI W ALISG    G   +A + F      G+  + + LA V+   
Sbjct: 262 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 321

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +         Q+H  A K G++ D  +   L+D Y K   L  A  + +  S        
Sbjct: 322 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 381

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           ++++   +   D  E  + LF +    G+EPDP   S LL+  AS +   +G+ +HA+ I
Sbjct: 382 SMITALSQ--CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 439

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K  + +D   GNAL+  YAKCGSI+ A   F  + +R +VSW+AM+   A HG GK AL 
Sbjct: 440 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 499

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF  M  EG  P+ I++  VL AC ++GL +     FN +++++G+    EH++CM+DLL
Sbjct: 500 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLL 559

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAG+L +AM L+NS PF  +  +W  L+  S++  + +   LA+++L  LEP+ +G+ +
Sbjct: 560 GRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHV 619

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L++N YA  GM +E AKVR  M D  + KE   SW+E+  K+H F+   K HP ++EIYS
Sbjct: 620 LLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYS 679

Query: 732 KLDLLNDEM 740
           KLD L D M
Sbjct: 680 KLDELGDLM 688



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 231/483 (47%), Gaps = 6/483 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +V    GS ++  G+ VHA +++ G + D F AN L+++Y K  R+D+A  +F+ M    
Sbjct: 115 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 174

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W +LI G + +G     + +   M  S    N    S IL+AC+       G QIH 
Sbjct: 175 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 234

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           F IK+  +++ ++G  L+ MY  +    +A  VF  ++++D+   N +I   +  G  + 
Sbjct: 235 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 294

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           AF +F  L       N  T   V+            +Q+H LA K G + +  V N ++ 
Sbjct: 295 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 354

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K     +A R+F+  S  ++I+ T++I+   +  HG  AI  F+E L  G+  D   
Sbjct: 355 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 414

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L+++++ C+  S  E G Q+H   IK  ++SD   G ALV  YAK G ++ A +      
Sbjct: 415 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 474

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    ++A++ G  +      +  + LF +    G+ P+ +T + +L  + + A LV  
Sbjct: 475 ERGVVSWSAMIGGLAQH--GHGKRALELFGRMVDEGINPNHITMTSVLC-ACNHAGLVDE 531

Query: 484 RSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAY 540
              +  S+K  +  D    +   +I +  + G +D A ++   +  +   S W A+L A 
Sbjct: 532 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGAS 591

Query: 541 ALH 543
            +H
Sbjct: 592 RVH 594


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/670 (32%), Positives = 382/670 (57%), Gaps = 2/670 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G   + LG+ VH  +   G + D F  ++LI  Y++   +  A+ LFD M 
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  + W  ++ GY+ +GD+++  G+  +M R+E   N  T + +L  C+      FG Q
Sbjct: 210 SKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQ 269

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H   + SG E +  V  +L++MY   G   +A  +F  +   D+   N MI  Y + G 
Sbjct: 270 LHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGF 329

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + A  +F  ++S+  +P+  TF++ + +  E   + +GK++H   ++ GV  ++ + +A
Sbjct: 330 MDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSA 389

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K    E A ++FD  +  +++  TA+ISGYV +G    A+  F   L   +  +
Sbjct: 390 LIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRAN 449

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  LA+V+  C+  + L LG +LHG  +K+G+     +G+A++D+YAK G L  A     
Sbjct: 450 SVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFI 509

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
           G S K    +N++++   +      E+ + LF Q  +AG + D V+ S  LS  A+   L
Sbjct: 510 GISDKDAVCWNSMITSCSQN--GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPAL 567

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +HA+ ++  + +D+   +ALI MY+KCG++D A ++F  + +++ VSWN++++AY
Sbjct: 568 HYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAY 627

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG  K +L LF  M  +G  PD ++ L ++ AC ++G  + GI  F  + +  G+   
Sbjct: 628 GNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMAR 687

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+ACMVDL GRAGRL+EA  +INS PFS    +W TL+   +L  N + + +AS+ L 
Sbjct: 688 MEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLF 747

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           DL+P+++G ++L+SN++A  G  +   K+R+ M +  + K  GCSWI++++  H FVA+ 
Sbjct: 748 DLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAAD 807

Query: 721 KDHPESEEIY 730
           + HP+S +IY
Sbjct: 808 RSHPQSSQIY 817



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/518 (31%), Positives = 265/518 (51%), Gaps = 7/518 (1%)

Query: 62  PQLVKISIGSGD---LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           PQLV I     D   L  G+  HA +L +G   +      L+ +Y        A+ +F  
Sbjct: 47  PQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQ 106

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           + +  +  W  +I+G+   G ++  L     M       +++T   +++AC  L     G
Sbjct: 107 LRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H      GFE +VFVG+SLI  Y  +GC  +A  +F  +  KD    N M+  Y K 
Sbjct: 167 RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKN 226

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G+ + A  VF+ +  ++  PN  TF  V+SVC   + +  G QLHGL V  G+  +  V 
Sbjct: 227 GDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVA 286

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N ++ MY K G   +A R+FD + + +L++W  +ISGYV++G   +A   F E +   + 
Sbjct: 287 NTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMK 346

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            DS   ++ +   S  + L  G ++H + I++G   DV L +AL+DIY K  D++ AR +
Sbjct: 347 PDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKI 406

Query: 419 LDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
            D  +        A++SG+ +  + ++  ++     Q+R   M  + VT + +L   A  
Sbjct: 407 FDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER---MRANSVTLASVLPACAGL 463

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L  G+ LH + +K G+     VG+A++ MYAKCG +D A Q F GISD+D V WN+M+
Sbjct: 464 AALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMI 523

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           ++ + +G  + A+ LF +M   G   D +SI   L AC
Sbjct: 524 TSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 561


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/660 (33%), Positives = 361/660 (54%), Gaps = 4/660 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +H  +LKS S  D    N+++N+Y K   L  AQK+FD M  R+ ++WTS+I G
Sbjct: 79  LEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAG 138

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G   + L     M +S    ++ T   I++ACS L D   G Q+HA  +KS F  +
Sbjct: 139 YSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAH 198

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +    +LISMY  S    +A +VF  +A +D+     MI  +++ G    A   F  +L 
Sbjct: 199 IIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLH 258

Query: 254 SD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              + PN++ F +V S C   L  E G+QLHG+++KFG+ R++  G ++  MY K G+  
Sbjct: 259 QGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLS 318

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +F  I   +L++W A+I+G+   G   +AI  F +    G+  D   + +++  C+
Sbjct: 319 CARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACT 378

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT-AEFN 431
             S L  G+Q+HG+  K G   DV +   L+ +YAK  +L+ A    +   C      +N
Sbjct: 379 SPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWN 438

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           AIL+  M    D  E+V  L     ++   PD +T + +L  SA    +  G  +H Y++
Sbjct: 439 AILTACMRH--DQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYAL 496

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           KTG   D  V N LI +YAKCGS+  A +IF  + + D+VSW++++  YA  G G+ AL 
Sbjct: 497 KTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALK 556

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF+ M+R    P+ ++ +GVL AC + GL E G  L+  +E+ +G+ P  EH +CMVDLL
Sbjct: 557 LFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLL 616

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG L+EA   I+   F    ++W+TL++  K   N      A++ +L ++P ++ + +
Sbjct: 617 ARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHV 676

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+ N+YA +G  ++ A++R+ M    + K  G SWIE+  ++H F      HPE  +IY+
Sbjct: 677 LLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYT 736



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 259/544 (47%), Gaps = 23/544 (4%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T + ++ ACS L     G++IH   +KS    ++ +   +++MY      ++A+ VF  +
Sbjct: 65  TYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM 124

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             ++V     +I  Y++ G+   A   +  +L S   P+ +TF ++I  C     +  G+
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           QLH   +K      I   NA+++MY K  +  +A  +F  ++ R+LISW ++I+G+ + G
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLG 244

Query: 341 HGGKAINGFLEFLDLGICCDSS-CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           +  +A+  F E L  G+   +     +V   CS     E G QLHG +IK G   DV  G
Sbjct: 245 YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAG 304

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            +L D+YAK G L  AR++           +NAI++GF      D ++ +  FSQ R  G
Sbjct: 305 CSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGF--AYGGDAKEAIAFFSQMRHQG 362

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           + PD +T   LL    S + L +G  +H Y  K G   DV V N L+TMYAKC  +  A 
Sbjct: 363 LIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAI 422

Query: 520 QIFKGIS-DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             F+ +  + D+VSWNA+L+A   H   +    L + M      PD I++  VL A   +
Sbjct: 423 FFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAET 482

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFAC-------MVDLLGRAGRLSEAMNLINSSPFSE 631
              E G    N++   Y L+  L    C       ++DL  + G L  A  + +S   + 
Sbjct: 483 VSIEIG----NQV-HCYALKTGLN---CDTSVTNGLIDLYAKCGSLKTAHKIFDSM-INP 533

Query: 632 SPLLWRTLV--SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
             + W +L+              +  + R LD++P    +F+ V    +  G+++E  K+
Sbjct: 534 DVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHV-TFVGVLTACSHVGLVEEGWKL 592

Query: 690 RTTM 693
             TM
Sbjct: 593 YGTM 596



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 226/491 (46%), Gaps = 18/491 (3%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K     GD+ LG+ +HA +LKS         N LI++Y K N +  A  +F  M  R 
Sbjct: 170 IIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRD 229

Query: 124 AITWTSLIKGYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
            I+W S+I G+   G + E++      +++     NE     +  ACS L    +G Q+H
Sbjct: 230 LISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLH 289

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             +IK G   +VF G SL  MY   G    A  VF  +   D+   N +I  +   G+++
Sbjct: 290 GMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAK 349

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A   F  +      P++ T  +++  C     + +G Q+HG   K G+  ++ V N ++
Sbjct: 350 EAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLL 409

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC-- 359
           TMY K     +A   F+ +    +L+SW A+++  +R     +       F  L + C  
Sbjct: 410 TMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEV------FRLLKLMCIS 463

Query: 360 ----DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
               D   L  V+   +   ++E+G Q+H +A+K G   D  +   L+D+YAK G LK+A
Sbjct: 464 QHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTA 523

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             + D         +++++ G+ +      E+ + LF   R   ++P+ VTF  +L+  +
Sbjct: 524 HKIFDSMINPDVVSWSSLILGYAQ--FGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACS 581

Query: 476 SQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSW 533
               +  G  L+    K  G A      + ++ + A+ G ++ A      ++ D DIV W
Sbjct: 582 HVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVW 641

Query: 534 NAMLSAYALHG 544
             +L+A   HG
Sbjct: 642 KTLLAACKTHG 652



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 6/235 (2%)

Query: 344 KAINGFLEFLD--LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
           +AI  F EFL    G C   S  A +I  CS   +LE G ++H   +K     D+ L   
Sbjct: 45  EAIKAF-EFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNH 103

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           ++++Y K   LK A+ + D    +    + ++++G+ +       + +  + Q   +G+ 
Sbjct: 104 ILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQN--GQGGNALEFYFQMLQSGVM 161

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           PD  TF  ++   +S   +  GR LHA+ +K+ + A +I  NALI+MY K   I  A  +
Sbjct: 162 PDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDV 221

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQAC 575
           F  ++ RD++SW +M++ ++  G    AL  F+EM  +G + P++     V  AC
Sbjct: 222 FSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSAC 276


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 224/711 (31%), Positives = 386/711 (54%), Gaps = 10/711 (1%)

Query: 33  SPNPKSQVAYLCSISSVSCSERTL-LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQN 91
           S +P   V +  S+  V     ++ L N +P + K+S    +++L +++H ++ +    +
Sbjct: 208 SEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLS----NIELCRSIHGYVFRRDFSS 263

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
               +N LI+LY+K   +DVA+++FD M+ +  ++W +++ GY  +G +  VL +   M 
Sbjct: 264 AV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 321

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
               + N+ +      A +   D   G++IH  A++   ++++ V T L+ MY   G   
Sbjct: 322 LGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETE 381

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           +A+ +F GL  +D+   + +I    + G  E A  +F  + +   +PN  T  +++  C 
Sbjct: 382 KAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACA 441

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
           +   ++ GK +H   VK  +  ++S G A+V+MY K G    A   F+ +S R++++W +
Sbjct: 442 DLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNS 501

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           LI+GY + G    AI+ F +     I  D+  +  V+  C++ ++L+ G  +HG  +K G
Sbjct: 502 LINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLG 561

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAILSGFMEKIADDEEDVMV 450
           + SD  +  AL+D+YAK G L SA  L +     K    +N I++ +M+      ++ + 
Sbjct: 562 FESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN--GHAKEAIS 619

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
            F Q RL    P+ VTF  +L  +A  A    G + HA  I+ G+ ++ +VGN+LI MYA
Sbjct: 620 SFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 679

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG +  + ++F  +  +D VSWNAMLS YA+HG G  A+ LF  M+      D +S + 
Sbjct: 680 KCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVS 739

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC + GL E G  +F+ +   Y ++P LEH+ACMVDLLGRAG   E +  I   P  
Sbjct: 740 VLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE 799

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
               +W  L+   ++ +N K   +A   L+ LEP++   F+++S++YA  G   +A K R
Sbjct: 800 PDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKAR 859

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           + MNDL L K  GCSW+E+ +K+H F    K HP+ E ++   + L ++M+
Sbjct: 860 SKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKME 910



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 164/612 (26%), Positives = 298/612 (48%), Gaps = 31/612 (5%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA ++ SG ++      +LINLY+ F++ D+A+ +FD     S I W S+I+ Y     
Sbjct: 51  IHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
           Y   L +   M     + +++T + +L+AC+   +   G   H    + G E +VF+G  
Sbjct: 110 YNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAG 169

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ MY   G  + A  VF  +  +DV   N MI   +++ +   A   F  +     EP+
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS--VGNAIVTMYGKHGMSEEAERM 317
             +  N+     +   +E  + +HG   +    R+ S  V N ++ +Y K G  + A R+
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFR----RDFSSAVSNGLIDLYSKCGDVDVARRV 285

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV-IDGCSVCS- 375
           FD + +++ +SW  +++GY  +G        F+E L+L    D   L  V I+  S  S 
Sbjct: 286 FDQMVDQDDVSWGTMMAGYAHNG-------CFVEVLEL---FDKMKLGNVRINKVSAVSA 335

Query: 376 --------NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
                   +LE G ++HG A++    SD+ + T L+ +YAK G+ + A+ L  G   +  
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDL 395

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             ++AI++  ++      E+ + LF + +   M+P+ VT   +L   A  + L  G+S+H
Sbjct: 396 VAWSAIIAALVQ--TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            +++K    +D+  G AL++MYAKCG    A   F  +S RDIV+WN++++ YA  G   
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            A+ +F +++     PD  +++GV+ AC      + G C+   I ++ G          +
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNAL 572

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           +D+  + G L  A  L N + F++  + W  +++      ++K +I +S   + LE    
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI-SSFHQMRLENFHP 631

Query: 668 GSFILVSNMYAG 679
            S   VS + A 
Sbjct: 632 NSVTFVSVLPAA 643



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 275/569 (48%), Gaps = 19/569 (3%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMY--FHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           QIHA  I SGF+++  + T LI++Y  FH      A +VF           N MI  Y +
Sbjct: 50  QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDL--ARSVFDSTPNPSRILWNSMIRAYTR 106

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           + +   A  ++  ++    EP+ YTFT V+  C   L ++EG   HG   + G+ R++ +
Sbjct: 107 SKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFI 166

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G  +V MY K G  + A  +FD + +R++++W A+I+G  +S    +A++ F     +G+
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV 226

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
              S  L  +  G    SN+EL   +HG+  +  + S V  G  L+D+Y+K GD+  AR 
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARR 284

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    +    +  +++G+       E  V+ LF + +L  +  + V+       +A  
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNGCFVE--VLELFDKMKLGNVRINKVSAVSAFLAAAET 342

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L +G+ +H  +++    +D++V   L+ MYAKCG  + A Q+F G+  RD+V+W+A++
Sbjct: 343 IDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAII 402

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +A    G  + AL LF+EM+ +   P+ ++++ +L AC    L + G  +     +   +
Sbjct: 403 AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA-DM 461

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN--SKFSILA 655
              L     +V +  + G  + A+   N    S   + W +L++    + +  +   +  
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLINGYAQIGDPYNAIDMFY 520

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
             RL  + P DAG+ + V    A    LD+   +   +  ++L  E+ C    + + L  
Sbjct: 521 KLRLSAINP-DAGTMVGVVPACALLNDLDQGTCIHGLI--VKLGFESDC---HVKNALID 574

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKLKV 744
             A     P +E +++K D   DE+   V
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/679 (33%), Positives = 363/679 (53%), Gaps = 2/679 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+K   G  DL LG  +HA  +K+G + D    + L+++Y K   LD A + F GM  R+
Sbjct: 157 LLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERN 216

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +++W + I G + +  Y   + +   M R     ++   +    +C+ +       Q+HA
Sbjct: 217 SVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHA 276

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK+ F ++  VGT+++ +Y  +G   +A   F GL + +V   N M++   + G    
Sbjct: 277 HAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAE 336

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +  S    +  + + V S C E  G  +G Q+H LAVK G   ++ V NAI+ 
Sbjct: 337 AMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILD 396

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           +YGK     EA  +F  + +R+ +SW A+I+   ++      I    E L  G+  D   
Sbjct: 397 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFT 456

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
             +V+  C+   +LE GL +HG AIK G   D  + + +VD+Y K G +  A+ L D   
Sbjct: 457 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIG 516

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +N+I+SGF   +    E+    FS+    G++PD  T++ +L   A+ A +  G
Sbjct: 517 GQELVSWNSIISGF--SLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELG 574

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +H   IK     D  + + L+ MYAKCG++  +  +F+     D VSWNAM+  YALH
Sbjct: 575 KQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALH 634

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G  AL +FE M+R    P+  + + VL+AC + GL + G   F+ +   Y L P LEH
Sbjct: 635 GQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEH 694

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           FACMVD+LGR+    EA+  I S P     ++W+TL+S+ K+  + + +  A+  +L L+
Sbjct: 695 FACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLD 754

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P DA  +IL+SN+YAG G   + ++ R  M   RL KE GCSWIE+ S++H F+   K H
Sbjct: 755 PDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVH 814

Query: 724 PESEEIYSKLDLLNDEMKL 742
           P S+E+Y  L+ L  EMKL
Sbjct: 815 PRSKEVYEMLNSLIGEMKL 833



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 161/600 (26%), Positives = 272/600 (45%), Gaps = 39/600 (6%)

Query: 55  TLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK--------- 105
           T  F+   QL   S G   L  GQA HA +L SG    TF +N L+ +YA+         
Sbjct: 17  TATFSHLYQLCA-SAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHG 75

Query: 106 ------------FNRL----------DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
                       +N +          D A  LF  M     ++W +LI GY   G + + 
Sbjct: 76  VFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNS 135

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
           +G++ +M R     +  T +V+L++C  L+D   G QIHA A+K+G E +V  G++L+ M
Sbjct: 136 VGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDM 195

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y       +A   F G+  ++       I    +  +      +FV +       +   +
Sbjct: 196 YGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAY 255

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
            +    C     +   +QLH  A+K     +  VG AIV +Y K G   +A R F  +  
Sbjct: 256 ASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPH 315

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
            N+ +  A++ G VR+G G +A+  F      G+  D   L+ V   C+       GLQ+
Sbjct: 316 HNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQV 375

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           H  A+K G+  DV +  A++D+Y K   L  A ++      + +  +NAI++   +   +
Sbjct: 376 HCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQN--E 433

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
             ED +   ++   +GMEPD  T+  +L   A    L  G  +H  +IK+G   D  V +
Sbjct: 434 CYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSS 493

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
            ++ MY KCG+I  A ++   I  +++VSWN+++S ++L    + A   F EM   G  P
Sbjct: 494 TVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKP 553

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEI--EQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
           D  +   VL  C      E G  +  +I  +++ G   I    + +VD+  + G + +++
Sbjct: 554 DHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYI---SSTLVDMYAKCGNMPDSL 610


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/694 (33%), Positives = 369/694 (53%), Gaps = 21/694 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           + +LV+ S  +G L  G+  H  ++K+  +   F  NNL+ +Y K    DVA+KLFD M 
Sbjct: 22  YTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMP 81

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ ++W SLI GY   G Y  V+ +  +   S+ + ++ T S  L  C    D   G  
Sbjct: 82  KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 141

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA    SG    V +  SLI MY   G    A  VF      D    N +I  Y + G 
Sbjct: 142 IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 201

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG--VEEGKQLHGLAVKFGVVREISVG 298
           ++    + V +L      N Y   + +  C  N    +E GK LHG AVK G+  ++ VG
Sbjct: 202 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVG 261

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR-----SGHGGKAINGFLEFL 353
            A++  Y K G  E+A ++F  + + N++ + A+I+G+++          +A+  F E  
Sbjct: 262 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 321

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
             G+       ++++  CS     E G Q+H    K+   SD  +G ALV++Y+  G ++
Sbjct: 322 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 381

Query: 414 SARMLLDGFSCKYTA------EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
                 DG  C ++        + +++ G ++      E  + LF +   +G +PD  T 
Sbjct: 382 ------DGLKCFHSTPKLDVVSWTSLIVGHVQN--GQFEGGLTLFHELLFSGRKPDEFTI 433

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           S +LS  A+ A +  G  +HAY+IKTG     I+ N+ I MYAKCG ID A   FK   +
Sbjct: 434 SIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKN 493

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
            DIVSW+ M+S+ A HG  K A+ LFE MK  G AP+ I+ LGVL AC + GL E G+  
Sbjct: 494 PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRY 553

Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           F  +++ +G+ P ++H AC+VDLLGRAGRL+EA + I  S F   P++WR+L+S  ++  
Sbjct: 554 FEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHK 613

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
            +      ++R+++LEP+ A S++L+ N+Y   G+   A ++R  M D  + KE G SWI
Sbjct: 614 ATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWI 673

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           E+ + +H FVA  + HP S+ IY +L+ + +E+K
Sbjct: 674 EVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIK 707



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 2/221 (0%)

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
           LG+  DS     ++   +   +L  G   H   IK  +   + L   L+ +Y K G+   
Sbjct: 13  LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A+ L D    +    +N+++SG+ +       +VM LF + R++ +  D  TFS  LS+ 
Sbjct: 73  AKKLFDRMPKRNVVSWNSLISGYTQ--MGFYHEVMNLFKEARMSDLRLDKFTFSNALSVC 130

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
                L  GR +HA    +G    V++ N+LI MY KCG ID A  +F+   + D VSWN
Sbjct: 131 GRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWN 190

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           ++++ Y   G     L L  +M R G   +  ++   L+AC
Sbjct: 191 SLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKAC 231



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%)

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           Q    G+  D VT+++L+  S     L+ G+  H + IKT +   + + N L+ MY KCG
Sbjct: 9   QPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCG 68

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
             D A ++F  +  R++VSWN+++S Y   G     + LF+E +      D  +    L 
Sbjct: 69  ETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALS 128

Query: 574 AC 575
            C
Sbjct: 129 VC 130


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/673 (32%), Positives = 374/673 (55%), Gaps = 8/673 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQN-DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           +L+LGQ +H + L++G  + D +    L+  Y +F+ + ++ ++F  MLVR+ ++W ++I
Sbjct: 176 ELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLMLVRNIVSWNAII 234

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+L+ GD    L +   M     KF+  T  V+++AC+       G Q+H  AIK    
Sbjct: 235 TGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLI 294

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           N++F+  +L++MY  +G    +  +F  +   D    N MI  Y   G    A  +F+ +
Sbjct: 295 NDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKM 354

Query: 252 LSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
                + +  T   ++S+C + N G   G+ LH  A+K G+  +  +GNA+++MY KH  
Sbjct: 355 RLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQ 414

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A+ +F+ +   ++ISW  +IS + +S    KA   FL   +  I  +S  + +++  
Sbjct: 415 ITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAF 474

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C   S+L  G  +HGFAIK+G   +  L T+L ++Y   GD ++A  +      +    +
Sbjct: 475 CKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSW 534

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N+++S +++   D+    ++LF+   ++ +EP+ VT   +L+     A L  G+ LHAY+
Sbjct: 535 NSLISSYIKN--DNAGKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYT 591

Query: 491 IK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            +       D  + NA ITMYA+CG +  A +IF  +  R IVSWNAM++ Y +HG G+ 
Sbjct: 592 TRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRD 651

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A L F +M  +GF P+++S   VL AC +SGL+  G+ LF+ + + +G+ P L H+ CMV
Sbjct: 652 ATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMV 711

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGR G  SEA+  INS P      +WR L+S  ++ +N+K       +L++LEP + G
Sbjct: 712 DLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPG 771

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +FIL+SN+YA  G+  E  ++R  + +  L K  G SWI I +++HHF A+   HP+SE 
Sbjct: 772 NFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSER 831

Query: 729 IYSKLDLLNDEMK 741
           IY  L+ L   ++
Sbjct: 832 IYENLNSLTSLIR 844



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 151/595 (25%), Positives = 278/595 (46%), Gaps = 22/595 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +H+F+      ND      L++ Y K   +  A K+F  M  R  ++W +LI GY+ 
Sbjct: 79  GVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVG 138

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-FENNVF 195
              Y+  + +  +M ++    N  T   +L AC  + +   G++IH + +++G F+ + +
Sbjct: 139 CLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAY 198

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           VGT+L+  Y        +  VF  +  +++   N +I  +   G+   A  ++  +L   
Sbjct: 199 VGTALVGFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEG 257

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            + +  T   VI  C E   +  G QLH LA+KF ++ ++ + NA++ MY  +G  E + 
Sbjct: 258 IKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSW 317

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F+A+   +   W ++IS Y+  G   +AI  F++     I  D   +A ++   S+C+
Sbjct: 318 ALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIML---SLCN 374

Query: 376 NLE----LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +L      G  LH  A+K G   D  LG AL+ +Y K   + +A+ + +         +N
Sbjct: 375 DLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWN 434

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            ++S F + +         LF     + ++ +  T   LL+     + LV GRS+H ++I
Sbjct: 435 TMISAFAQSMF--RAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAI 492

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G   +  +  +L  MY  CG    A  +F     RD+VSWN+++S+Y  +     ALL
Sbjct: 493 KNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALL 552

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI-LEHFACM--- 607
           LF  M  E   P+ ++I+ +L +C        G CL     +    R + LE  A +   
Sbjct: 553 LFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTR----REVSLEMDASLANA 607

Query: 608 -VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
            + +  R G+L  A  +  +   + S + W  +++   +    + + LA  ++LD
Sbjct: 608 FITMYARCGKLQYAEKIFCTLQ-TRSIVSWNAMITGYGMHGRGRDATLAFAQMLD 661



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 158/592 (26%), Positives = 272/592 (45%), Gaps = 19/592 (3%)

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
           LV  +  W S+IK +    +  ++L     M       +  T  ++L+AC  L     G 
Sbjct: 21  LVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGV 80

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IH+F       N+V VGT+L+  Y   G   EA  VF  +  +D+   N +I  Y    
Sbjct: 81  RIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCL 140

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVG 298
             + A  +FV +  +   PN  T   ++  C E L +  G+++HG  ++ G+   +  VG
Sbjct: 141 CYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVG 200

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A+V  Y +   +  + R+F  +  RN++SW A+I+G++  G   KA+  +   L  GI 
Sbjct: 201 TALVGFYMRFD-AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIK 259

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D+  +  VI  C+    L LG+QLH  AIK   ++D+ +  AL+++Y+  G L+S+  L
Sbjct: 260 FDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWAL 319

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS-Q 477
            +       A +N+++S ++        + + LF + RL  ++ D  T + +LSL     
Sbjct: 320 FNAVPTSDAALWNSMISSYIG--FGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLN 377

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
              + GR LHA+++K+G   D  +GNAL++MY K   I  A  +F+ +   D++SWN M+
Sbjct: 378 DGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMI 437

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIE 592
           SA+A       A  LF  M       +  +I+ +L  C     +  G S  G  + N +E
Sbjct: 438 SAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLE 497

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
               L         + ++    G    A N+    P     + W +L+S      N+  +
Sbjct: 498 INTSLN------TSLTEMYINCGDERAATNMFTRCP-QRDLVSWNSLISSYIKNDNAGKA 550

Query: 653 ILASKRLL-DLEPKDAGSF-ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
           +L    ++ +LEP       IL S        L +     TT  ++ L  +A
Sbjct: 551 LLLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDA 602



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 225/473 (47%), Gaps = 8/473 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+LG  +H   +K    ND F  N L+N+Y+    L+ +  LF+ +    A  W S+I
Sbjct: 276 GCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMI 335

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED-RIFGEQIHAFAIKSGF 190
             Y+  G +   + +   M     K +  T +++L  C+ L D  I+G  +HA A+KSG 
Sbjct: 336 SSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGI 395

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E + ++G +L+SMY        A+ VF  +   DV   N MI  + ++     AF +F+ 
Sbjct: 396 ELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLM 455

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  S+ + N YT  ++++ C +   +  G+ +HG A+K G+    S+  ++  MY   G 
Sbjct: 456 MCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGD 515

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A  MF    +R+L+SW +LIS Y+++ + GKA+  F   +   +  +S  +  ++  
Sbjct: 516 ERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTS 574

Query: 371 CSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           C+  ++L LG  LH +  +       D  L  A + +YA+ G L+ A  +      +   
Sbjct: 575 CTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIV 634

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-H 487
            +NA+++G+   +     D  + F+Q    G +P+ V+F+ +LS  +     V G  L H
Sbjct: 635 SWNAMITGY--GMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH 692

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
           +     G A  +     ++ +  + G    A      +  + D   W A+LS+
Sbjct: 693 SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS 745



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 166/341 (48%), Gaps = 21/341 (6%)

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
           HG+S   E+       ++   W ++I  + +  +    ++ + +   LGI  DS+ +  V
Sbjct: 10  HGLSSTPEQTHLVNVSKD---WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLV 66

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C   + +  G+++H F      ++DVR+GTALVD Y K G +  A  +      +  
Sbjct: 67  LKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDL 126

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +NA++SG++  +   E   ++LF + + AG+ P+  T   LL        L  G+ +H
Sbjct: 127 VSWNALISGYVGCLCYKE--AVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIH 184

Query: 488 AYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
            Y ++ G +  D  VG AL+  Y +  ++  + ++F  +  R+IVSWNA+++ +   G  
Sbjct: 185 GYCLRNGLFDMDAYVGTALVGFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDC 243

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL------FNEIEQIYGLRPI 600
             AL L+  M  EG   D +++L V+QAC   G    G+ L      FN I  ++ L  +
Sbjct: 244 AKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNAL 303

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           L  ++         G L  +  L N+ P S++  LW +++S
Sbjct: 304 LNMYS-------DNGSLESSWALFNAVPTSDAA-LWNSMIS 336


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/641 (33%), Positives = 347/641 (54%), Gaps = 21/641 (3%)

Query: 100 INLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
           +N   K  RL  A  LFD M  ++ + WTS++ GY  +G  E+ L +  DM  S    N+
Sbjct: 55  LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
             C+  L AC+ L     GEQ+H+ A+++GF  + ++G+ LI MY   G    A+ VF  
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +   DV     +I  + + GE E+A    + +L    +PN++T T +++ C   LG    
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLG---- 230

Query: 280 KQLHGLAVKFGVVREISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           +Q+HG  +K   +R  SV    A++  Y ++G  + A+ +FD++  +N++SW +++  Y+
Sbjct: 231 QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYI 290

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           R G   +A+  F + +  G+  +   L+ V+     C ++ LG QLH  AIKH  ++D+R
Sbjct: 291 RDGRLEEALQVFGDMISEGVDPNEFALSIVL---GACGSIGLGRQLHCSAIKHDLITDIR 347

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS-----GFMEKIADDEEDVMVLF 452
           +  AL+ +Y + G ++    +L+         +   +S     GF EK        + L 
Sbjct: 348 VSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEK-------AIALL 400

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            Q    G  P+   FS +LS  A  A L +G   H  ++K G  +++  GNALI MY+KC
Sbjct: 401 CQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKC 460

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G +  A   F  +   D+ SWN+++  +A HG    AL +F +M+  G  PDD + LGVL
Sbjct: 461 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 520

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
             C +SG+ E G   F  +   Y   P   H+ACM+D+LGR GR  EA+ +IN  PF   
Sbjct: 521 MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 580

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
            L+W+TL++  KL  N     LA+ RL++L  +D+ S++L+SN+YA  G  ++A KVR  
Sbjct: 581 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRR 640

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           M++  + K+AGCSWIEI++++H F +    HP S+ IY  L
Sbjct: 641 MDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQML 681



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 248/477 (51%), Gaps = 15/477 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ G+ VH+  +++G   D +  + LI +Y++   L  A+++FD M     + +TSLI
Sbjct: 128 GALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 187

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GF 190
             +  +G++E        M +   K NEHT + IL AC     R+ G+QIH + IK  G 
Sbjct: 188 SAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHGYLIKKIGL 243

Query: 191 EN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            + +V+  T+LI  Y  +G F+ A+ VF  L  K+V     M+  Y + G  E A  VF 
Sbjct: 244 RSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFG 303

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            ++S   +PN++  + V+  C  ++G+  G+QLH  A+K  ++ +I V NA+++MYG+ G
Sbjct: 304 DMISEGVDPNEFALSIVLGAC-GSIGL--GRQLHCSAIKHDLITDIRVSNALLSMYGRTG 360

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           + EE E M + I   +L+SWT  IS   ++G G KAI    +    G   +    ++V+ 
Sbjct: 361 LVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLS 420

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+  ++L+ G+Q H  A+K G  S++  G AL+++Y+K G + SAR+  D         
Sbjct: 421 SCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTS 480

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N+++ G  +    D    + +FS+ R  G++PD  TF  +L +  + + +V    L   
Sbjct: 481 WNSLIHGHAQH--GDANKALEVFSKMRSNGIKPDDSTFLGVL-MGCNHSGMVEEGELFFR 537

Query: 490 SIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            +   Y+      +   +I M  + G  D A ++   +  + D + W  +L++  LH
Sbjct: 538 LMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 594



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 18/167 (10%)

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
           + DV++    +    K G +  A  +F  +  +++V+W +++S Y  +G  + AL +F +
Sbjct: 45  SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA-------CMV 608
           M   G AP+D +    L AC   G    G       EQ++ L  +   FA       C++
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAG-------EQVHSL-AVRAGFAGDAWIGSCLI 156

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           ++  R G L  A  + +     +SP +      +S    N +F + A
Sbjct: 157 EMYSRCGSLPAAKEVFDR---MDSPDVVGYTSLISAFCRNGEFELAA 200


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 223/665 (33%), Positives = 352/665 (52%), Gaps = 4/665 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L   + +H  +LKS  Q      N++IN+Y K   +  A+K+FD M + + ++WTS+I G
Sbjct: 175 LDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISG 234

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G     + +   M RS +  ++ T   +++AC +  D   G Q+HA  IKS F ++
Sbjct: 235 YSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHH 294

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +    +LISMY + G    A NVF  +  KD+     MI  Y + G    A ++F  LL 
Sbjct: 295 LTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLR 354

Query: 254 S-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              ++PN++ F +V S C   L +E GKQ+HG+ VKFG+ R +  G ++  MY K G   
Sbjct: 355 QGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLP 414

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A+  F  I   +++SW A+I+ +  +G   +AI+ F + + +G+  DS    +++  C 
Sbjct: 415 SAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCG 474

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT-AEFN 431
               L  G Q+H + +K G+  ++ +  +L+ +Y K   L  A  +    S       +N
Sbjct: 475 SPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWN 534

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           AILS  ++K    E +   L+ +   +G +PD +T + LL   A    L  G  +H YSI
Sbjct: 535 AILSACLQK--KQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSI 592

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K+G   DV V N LI MYAKCGS+  A  +F    + DIVSW++++  YA  GLG  AL 
Sbjct: 593 KSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALN 652

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF  M   G  P++++ LG L AC + GL E G  L+  +E  +G+ P  EHF+C+VDLL
Sbjct: 653 LFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLL 712

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG L EA   I  S        W+TL++  K   N   +   +  +L L+P ++ + +
Sbjct: 713 ARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMV 772

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           ++ N++A  G  +E AK+R  M  + + K  G SWIE+  K H F +    HP+   IY+
Sbjct: 773 MLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYT 832

Query: 732 KLDLL 736
            L+ L
Sbjct: 833 MLEEL 837



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 244/481 (50%), Gaps = 13/481 (2%)

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
           S   F   T + ++ AC+      + ++IH   +KS ++ ++ +   +I+MY   G  ++
Sbjct: 153 SNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKD 212

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF  +   +V     MI  Y++ G++  A  +++ +  S   P+  TF +VI  CY 
Sbjct: 213 ARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYI 272

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
              ++ G+QLH   +K      ++  NA+++MY   G  E A  +F  I  ++LISW  +
Sbjct: 273 AGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTM 332

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSS-CLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           I+GY++ G+  +A+  F + L  G    +     +V   CS    LE G Q+HG  +K G
Sbjct: 333 ITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFG 392

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
              +V  G +L D+YAK G L SA+M            +NAI++ F +    D  + +  
Sbjct: 393 LRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADN--GDANEAIDF 450

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           F Q    G+ PD +T+  LL    S   L +GR +H+Y +K G+  ++ V N+L+TMY K
Sbjct: 451 FRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTK 510

Query: 512 CGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           C  +  A  +F+ IS + ++VSWNA+LSA            L++EM   G  PD I+I  
Sbjct: 511 CSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITT 570

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRP--ILEHFAC--MVDLLGRAGRLSEAMNLINS 626
           +L  C  + L+  G+   N++   Y ++   IL+   C  ++D+  + G L  A ++ +S
Sbjct: 571 LLGTC--AELTSLGVG--NQV-HCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDS 625

Query: 627 S 627
           +
Sbjct: 626 T 626



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 236/484 (48%), Gaps = 6/484 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    +GD+ LG+ +HA ++KS   +     N LI++Y  F +++ A  +F  +  + 
Sbjct: 266 VIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKD 325

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRS-EEKFNEHTCSVILEACSLLEDRIFGEQIH 182
            I+W ++I GY+  G     L +  D+ R    + NE     +  ACS L +  +G+Q+H
Sbjct: 326 LISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVH 385

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
              +K G   NVF G SL  MY   G    A+  F  +   D+   N +I  +   G++ 
Sbjct: 386 GMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDAN 445

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A   F  ++     P+  T+ +++  C   + + +G+Q+H   VK G  +EI+V N+++
Sbjct: 446 EAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLL 505

Query: 303 TMYGKHGMSEEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           TMY K     +A  +F  IS   NL+SW A++S  ++    G+    + E    G   DS
Sbjct: 506 TMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDS 565

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             + T++  C+  ++L +G Q+H ++IK G + DV +   L+D+YAK G LK AR + D 
Sbjct: 566 ITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDS 625

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
                   +++++ G+ +       + + LF      G++P+ VT+   LS  +    + 
Sbjct: 626 TQNLDIVSWSSLIVGYAQ--CGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVE 683

Query: 482 RGRSLH-AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ-IFKGISDRDIVSWNAMLSA 539
            G  L+ +   + G        + ++ + A+ G +  A   I K   D DI +W  +L+A
Sbjct: 684 EGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAA 743

Query: 540 YALH 543
              H
Sbjct: 744 CKTH 747



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 192/408 (47%), Gaps = 16/408 (3%)

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           E+  AF   +   +S FEP+  T+T+++  C     ++  K++H   +K      I + N
Sbjct: 141 EALEAFDFHLKNSNSHFEPS--TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQN 198

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            ++ MYGK G  ++A ++FD +   N++SWT++ISGY ++G    AI  +++    G   
Sbjct: 199 HMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFP 258

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D     +VI  C +  +++LG QLH   IK  +   +    AL+ +Y   G ++ A  + 
Sbjct: 259 DQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVF 318

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                K    +  +++G+++ +    E + +     R    +P+   F  + S  +S   
Sbjct: 319 TRIPTKDLISWGTMITGYIQ-LGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLE 377

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  G+ +H   +K G   +V  G +L  MYAK G +  A   F  I + DIVSWNA+++A
Sbjct: 378 LEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAA 437

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY---- 595
           +A +G    A+  F +M   G  PD I+ + +L  C       G     N+  QI+    
Sbjct: 438 FADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTC-------GSPVRLNQGRQIHSYIV 490

Query: 596 --GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             G    +     ++ +  +   L +A+N+      + + + W  ++S
Sbjct: 491 KIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILS 538


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/641 (33%), Positives = 347/641 (54%), Gaps = 21/641 (3%)

Query: 100 INLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
           +N   K  RL  A  LFD M  ++ + WTS++ GY  +G  E+ L +  DM  S    N+
Sbjct: 55  LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
             C+  L AC+ L     GEQ+H+ A+++GF  + ++G+ LI MY   G    A+ VF  
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +   DV     +I  + + GE E+A    + +L    +PN++T T +++ C   LG    
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLG---- 230

Query: 280 KQLHGLAVKFGVVREISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           +Q+HG  +K   +R  SV    A++  Y ++G  + A+ +FD++  +N++SW +++  Y+
Sbjct: 231 QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYI 290

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           R G   +A+  F + +  G+  +   L+ V+     C ++ LG QLH  AIKH  ++D+R
Sbjct: 291 RDGRLEEALQVFGDMISEGVDPNEFALSIVL---GACGSIGLGRQLHCSAIKHDLITDIR 347

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS-----GFMEKIADDEEDVMVLF 452
           +  AL+ +Y + G ++    +L+         +   +S     GF EK        + L 
Sbjct: 348 VSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEK-------AIALL 400

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            Q    G  P+   FS +LS  A  A L +G   H  ++K G  +++  GNALI MY+KC
Sbjct: 401 CQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKC 460

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G +  A   F  +   D+ SWN+++  +A HG    AL +F +M+  G  PDD + LGVL
Sbjct: 461 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 520

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
             C +SG+ E G   F  +   Y   P   H+ACM+D+LGR GR  EA+ +IN  PF   
Sbjct: 521 MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 580

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
            L+W+TL++  KL  N     LA+ RL++L  +D+ S++L+SN+YA  G  ++A KVR  
Sbjct: 581 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRR 640

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           M++  + K+AGCSWIEI++++H F +    HP S+ IY  L
Sbjct: 641 MDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQML 681



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 248/477 (51%), Gaps = 15/477 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ G+ VH+  +++G   D +  + LI +Y++   L  A+++FD M     + +TSLI
Sbjct: 128 GALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 187

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GF 190
             +  +G++E        M +   K NEHT + IL AC     R+ G+QIH + IK  G 
Sbjct: 188 SAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHGYLIKKIGL 243

Query: 191 EN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            + +V+  T+LI  Y  +G F+ A+ VF  L  K+V     M+  Y + G  E A  VF 
Sbjct: 244 RSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFG 303

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            ++S   +PN++  + V+  C  ++G+  G+QLH  A+K  ++ +I V NA+++MYG+ G
Sbjct: 304 DMISEGVDPNEFALSIVLGAC-GSIGL--GRQLHCSAIKHDLITDIRVSNALLSMYGRTG 360

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           + EE E M + I   +L+SWT  IS   ++G G KAI    +    G   +    ++V+ 
Sbjct: 361 LVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLS 420

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+  ++L+ G+Q H  A+K G  S++  G AL+++Y+K G + SAR+  D         
Sbjct: 421 SCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTS 480

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N+++ G  +    D    + +FS+ R  G++PD  TF  +L +  + + +V    L   
Sbjct: 481 WNSLIHGHAQH--GDANKALEVFSKMRSNGIKPDDSTFLGVL-MGCNHSGMVEEGELFFR 537

Query: 490 SIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            +   Y+      +   +I M  + G  D A ++   +  + D + W  +L++  LH
Sbjct: 538 LMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 594



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 27/213 (12%)

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSL-----HAYSIKTGYA--ADVIVGNALITMY 509
           +A + P P    R+L+ +       R R +      A +   G A   DV++    +   
Sbjct: 1   MAALPPTPRP--RVLAAAPCHVPSRRRRRVCDGLCSAAAADNGCAESPDVVLECKRLNRL 58

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
            K G +  A  +F  +  +++V+W +++S Y  +G  + AL +F +M   G AP+D +  
Sbjct: 59  VKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACN 118

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA-------CMVDLLGRAGRLSEAMN 622
             L AC   G    G       EQ++ L  +   FA       C++++  R G L  A  
Sbjct: 119 AALVACADLGALRAG-------EQVHSL-AVRAGFAGDAWIGSCLIEMYSRCGSLPAAKE 170

Query: 623 LINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           + +     +SP +      +S    N +F + A
Sbjct: 171 VFDR---MDSPDVVGYTSLISAFCRNGEFELAA 200


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/673 (32%), Positives = 374/673 (55%), Gaps = 8/673 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQN-DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           +L+LGQ +H + L++G  + D +    L+  Y +F+ + ++ ++F  MLVR+ ++W ++I
Sbjct: 176 ELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLMLVRNIVSWNAII 234

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+L+ GD    L +   M     KF+  T  V+++AC+       G Q+H  AIK    
Sbjct: 235 TGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLI 294

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           N++F+  +L++MY  +G    +  +F  +   D    N MI  Y   G    A  +F+ +
Sbjct: 295 NDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKM 354

Query: 252 LSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
                + +  T   ++S+C + N G   G+ LH  A+K G+  +  +GNA+++MY KH  
Sbjct: 355 RLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQ 414

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A+ +F+ +   ++ISW  +IS + +S    KA   FL   +  I  +S  + +++  
Sbjct: 415 ITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAF 474

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C   S+L  G  +HGFAIK+G   +  L T+L ++Y   GD ++A  +      +    +
Sbjct: 475 CKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSW 534

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N+++S +++   D+    ++LF+   ++ +EP+ VT   +L+     A L  G+ LHAY+
Sbjct: 535 NSLISSYIKN--DNAGKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYT 591

Query: 491 IK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            +       D  + NA ITMYA+CG +  A +IF  +  R IVSWNAM++ Y +HG G+ 
Sbjct: 592 TRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRD 651

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A L F +M  +GF P+++S   VL AC +SGL+  G+ LF+ + + +G+ P L H+ CMV
Sbjct: 652 ATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMV 711

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGR G  SEA+  INS P      +WR L+S  ++ +N+K       +L++LEP + G
Sbjct: 712 DLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPG 771

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +FIL+SN+YA  G+  E  ++R  + +  L K  G SWI I +++HHF A+   HP+SE 
Sbjct: 772 NFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSER 831

Query: 729 IYSKLDLLNDEMK 741
           IY  L+ L   ++
Sbjct: 832 IYENLNSLTSLIR 844



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/595 (25%), Positives = 277/595 (46%), Gaps = 22/595 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +H+ +      ND      L++ Y K   +  A K+F  M  R  ++W +LI GY+ 
Sbjct: 79  GVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVG 138

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-FENNVF 195
              Y+  + +  +M ++    N  T   +L AC  + +   G++IH + +++G F+ + +
Sbjct: 139 CLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAY 198

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           VGT+L+  Y        +  VF  +  +++   N +I  +   G+   A  ++  +L   
Sbjct: 199 VGTALVGFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEG 257

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            + +  T   VI  C E   +  G QLH LA+KF ++ ++ + NA++ MY  +G  E + 
Sbjct: 258 IKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSW 317

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F+A+   +   W ++IS Y+  G   +AI  F++     I  D   +A ++   S+C+
Sbjct: 318 ALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIML---SLCN 374

Query: 376 NLE----LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +L      G  LH  A+K G   D  LG AL+ +Y K   + +A+ + +         +N
Sbjct: 375 DLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWN 434

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            ++S F + +         LF     + ++ +  T   LL+     + LV GRS+H ++I
Sbjct: 435 TMISAFAQSMF--RAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAI 492

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G   +  +  +L  MY  CG    A  +F     RD+VSWN+++S+Y  +     ALL
Sbjct: 493 KNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALL 552

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI-LEHFACM--- 607
           LF  M  E   P+ ++I+ +L +C        G CL     +    R + LE  A +   
Sbjct: 553 LFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTR----REVSLEMDASLANA 607

Query: 608 -VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
            + +  R G+L  A  +  +   + S + W  +++   +    + + LA  ++LD
Sbjct: 608 FITMYARCGKLQYAEKIFCTLQ-TRSIVSWNAMITGYGMHGRGRDATLAFAQMLD 661



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 158/592 (26%), Positives = 271/592 (45%), Gaps = 19/592 (3%)

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
           LV  +  W S+IK +    +  ++L     M       +  T  ++L+AC  L     G 
Sbjct: 21  LVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGV 80

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IH+        N+V VGT+L+  Y   G   EA  VF  +  +D+   N +I  Y    
Sbjct: 81  RIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCL 140

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVG 298
             + A  +FV +  +   PN  T   ++  C E L +  G+++HG  ++ G+   +  VG
Sbjct: 141 CYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVG 200

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A+V  Y +   +  + R+F  +  RN++SW A+I+G++  G   KA+  +   L  GI 
Sbjct: 201 TALVGFYMRFD-AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIK 259

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D+  +  VI  C+    L LG+QLH  AIK   ++D+ +  AL+++Y+  G L+S+  L
Sbjct: 260 FDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWAL 319

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS-Q 477
            +       A +N+++S ++        + + LF + RL  ++ D  T + +LSL     
Sbjct: 320 FNAVPTSDAALWNSMISSYIG--FGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLN 377

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
              + GR LHA+++K+G   D  +GNAL++MY K   I  A  +F+ +   D++SWN M+
Sbjct: 378 DGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMI 437

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIE 592
           SA+A       A  LF  M       +  +I+ +L  C     +  G S  G  + N +E
Sbjct: 438 SAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLE 497

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
               L   L       ++    G    A N+    P     + W +L+S      N+  +
Sbjct: 498 INTSLNTSL------TEMYINCGDERAATNMFTRCP-QRDLVSWNSLISSYIKNDNAGKA 550

Query: 653 ILASKRLL-DLEPKDAGSF-ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
           +L    ++ +LEP       IL S        L +     TT  ++ L  +A
Sbjct: 551 LLLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDA 602



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 225/473 (47%), Gaps = 8/473 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+LG  +H   +K    ND F  N L+N+Y+    L+ +  LF+ +    A  W S+I
Sbjct: 276 GCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMI 335

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED-RIFGEQIHAFAIKSGF 190
             Y+  G +   + +   M     K +  T +++L  C+ L D  I+G  +HA A+KSG 
Sbjct: 336 SSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGI 395

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E + ++G +L+SMY        A+ VF  +   DV   N MI  + ++     AF +F+ 
Sbjct: 396 ELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLM 455

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  S+ + N YT  ++++ C +   +  G+ +HG A+K G+    S+  ++  MY   G 
Sbjct: 456 MCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGD 515

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A  MF    +R+L+SW +LIS Y+++ + GKA+  F   +   +  +S  +  ++  
Sbjct: 516 ERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTS 574

Query: 371 CSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           C+  ++L LG  LH +  +       D  L  A + +YA+ G L+ A  +      +   
Sbjct: 575 CTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIV 634

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-H 487
            +NA+++G+   +     D  + F+Q    G +P+ V+F+ +LS  +     V G  L H
Sbjct: 635 SWNAMITGY--GMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH 692

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
           +     G A  +     ++ +  + G    A      +  + D   W A+LS+
Sbjct: 693 SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS 745



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 165/341 (48%), Gaps = 21/341 (6%)

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
           HG+S   E+       ++   W ++I  + +  +    ++ + +   LGI  DS+ +  V
Sbjct: 10  HGLSSTPEQTHLVNVSKD---WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLV 66

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C   + +  G+++H        ++DVR+GTALVD Y K G +  A  +      +  
Sbjct: 67  LKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDL 126

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +NA++SG++  +   E   ++LF + + AG+ P+  T   LL        L  G+ +H
Sbjct: 127 VSWNALISGYVGCLCYKE--AVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIH 184

Query: 488 AYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
            Y ++ G +  D  VG AL+  Y +  ++  + ++F  +  R+IVSWNA+++ +   G  
Sbjct: 185 GYCLRNGLFDMDAYVGTALVGFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDC 243

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL------FNEIEQIYGLRPI 600
             AL L+  M  EG   D +++L V+QAC   G    G+ L      FN I  ++ L  +
Sbjct: 244 AKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNAL 303

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           L  ++         G L  +  L N+ P S++  LW +++S
Sbjct: 304 LNMYS-------DNGSLESSWALFNAVPTSDAA-LWNSMIS 336


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/657 (31%), Positives = 361/657 (54%), Gaps = 3/657 (0%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           ++K+G   D+   ++L+N+Y K   L  A+++ + M ++    W   +         +  
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
           + +   M  +  + N+   + ++ A + L D  +GE IHA   K GFE+++ +  + ++M
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y  +         F+ +  +++   N ++  +      +    + + LL   FEPN YTF
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
            +++  C     + EGK +HG  +K G+  +  + N++V +Y K G +  A ++F  I E
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           R+++SWTALI+G+V  G+G   +  F + L  G   +     +++  CS  S+++LG Q+
Sbjct: 255 RDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           H   +K+    +  +GTALVD+YAK   L+ A  + +    +    +  I++G+ +    
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD--G 371

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
             E  +  F Q +  G++P+  T +  LS  +  A L  GR LH+ +IK G + D+ V +
Sbjct: 372 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVAS 431

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           AL+ MYAKCG ++ A  +F G+  RD VSWN ++  Y+ HG G  AL  FE M  EG  P
Sbjct: 432 ALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVP 491

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           D+++ +GVL AC + GL E G   FN + +IYG+ P +EH+ACMVD+LGRAG+  E  + 
Sbjct: 492 DEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESF 551

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
           I     + + L+W T++   K+  N +F   A+ +L +LEP+   ++IL+SNM+A +GM 
Sbjct: 552 IEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMW 611

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           D+   VR  M+   + KE GCSW+E++ ++H F++    HP+  EI+ KL  L+ ++
Sbjct: 612 DDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKL 668



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 185/358 (51%), Gaps = 2/358 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K     GDL  G+A+H  ++KSG   D+   N+L+N+YAK    + A K+F  +  R 
Sbjct: 197 ILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 256

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++WT+LI G++ +G Y S L I   M       N +T   IL +CS L D   G+Q+HA
Sbjct: 257 VVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHA 315

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K+  + N FVGT+L+ MY  +    +AE +F  L  +D+     ++  Y + G+ E 
Sbjct: 316 QIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEK 375

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A   F+ +     +PN++T  + +S C     ++ G+QLH +A+K G   ++ V +A+V 
Sbjct: 376 AVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVD 435

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  E+AE +FD +  R+ +SW  +I GY + G GGKA+  F   LD G   D   
Sbjct: 436 MYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVT 495

Query: 364 LATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              V+  CS    +E G +  +  +  +G    +     +VDI  + G        ++
Sbjct: 496 FIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIE 553



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 238/498 (47%), Gaps = 11/498 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+  +   GD   G+++HA + K G ++D   +N  + +Y K   ++   + F  M++ +
Sbjct: 96  LISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIEN 155

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +  +L+ G+ D    +    I   +     + N +T   IL+ C+   D   G+ IH 
Sbjct: 156 LASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHG 215

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             IKSG   +  +  SL+++Y   G    A  VF  +  +DV     +I  +   G    
Sbjct: 216 QVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS- 274

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +F  +L+  F PN YTF +++  C     V+ GKQ+H   VK  +     VG A+V 
Sbjct: 275 GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 334

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K+   E+AE +F+ + +R+L +WT +++GY + G G KA+  F++    G+  +   
Sbjct: 335 MYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFT 394

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           LA+ + GCS  + L+ G QLH  AIK G   D+ + +ALVD+YAK G ++ A ++ DG  
Sbjct: 395 LASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLV 454

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            + T  +N I+ G+ +     +   +  F      G  PD VTF  +LS  +    +  G
Sbjct: 455 SRDTVSWNTIICGYSQHGQGGK--ALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEG 512

Query: 484 RSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAY 540
           +  H  S+   Y     + +   ++ +  + G         + +    +++ W  +L A 
Sbjct: 513 KK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGAC 571

Query: 541 ALHG---LG-KGALLLFE 554
            +HG    G + A+ LFE
Sbjct: 572 KMHGNIEFGERAAMKLFE 589



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 185/411 (45%), Gaps = 40/411 (9%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D+ LG+ VHA ++K+    + F    L+++YAK   L+ A+ +F+ ++ R    WT ++ 
Sbjct: 306 DVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 365

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY  DG  E  +     M R   K NE T +  L  CS +     G Q+H+ AIK+G   
Sbjct: 366 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 425

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           ++FV ++L+ MY   GC  +AE VF GL  +D    N +I  Y++ G+   A   F  +L
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                P++ TF  V+S C     +EEGK+  + L+  +G+   I     +V + G+ G  
Sbjct: 486 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545

Query: 312 EEAERMFDAIS-ERNLISWTALISGYVRSGH---GGKAINGFLE---------------F 352
            E E   + +    N++ W  ++      G+   G +A     E               F
Sbjct: 546 HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMF 605

Query: 353 LDLGICCDSSCLATVIDGCSV-----CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
              G+  D + +  ++    V     CS +E+  Q+H F    G    +R      +I+ 
Sbjct: 606 AAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIR------EIHL 659

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           K  DL    M     S  YT   + +L      ++D E+  ++ +  +RLA
Sbjct: 660 KLQDLHQKLM-----SVGYTPNTDHVL----HNVSDREKQELLFYHSERLA 701


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/679 (33%), Positives = 368/679 (54%), Gaps = 11/679 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+K  I S  LK G+ +H  ++  G QN+     +LINLY   +    A+ +F  +    
Sbjct: 9   LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68

Query: 124 AIT-WTSLI----KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
            IT W  L+    K ++     E    +    Y   + F   T   +L+ACS L    +G
Sbjct: 69  DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAF---TYPSVLKACSGLGRVGYG 125

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           + +H   IKSGF  +V V +S + MY     F +A  +F  +  +DV   N +I  Y + 
Sbjct: 126 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 185

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G+ E A  +F  +  S F+P+  T T VIS C   L +E GK++H   V+ G   +  V 
Sbjct: 186 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 245

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           +A+V MYGK G  E A+ +F+ I  +N++SW ++I+GY   G     I  F    + GI 
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 305

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
              + L++++  CS   NL+LG  +HG+ I++   +D+ + ++L+D+Y K G++ SA  +
Sbjct: 306 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 365

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                      +N ++SG+++       + +V+F+  R AG++PD +TF+ +L   +  A
Sbjct: 366 FQNMPKTNVVSWNVMISGYVK--VGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLA 423

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L +G+ +H + I++    + +V  AL+ MYAKCG++D A  IF  + +RD VSW +M++
Sbjct: 424 VLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIA 483

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           AY  HG    AL LFE+M++    PD ++ L +L AC ++GL + G   FN++   YG +
Sbjct: 484 AYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFK 543

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSP-FSESPLLWRTLVSVSKLMANSKFSILASK 657
           P +EH++C++DLLGR GRL EA  ++  +P   E   L  TL S   L           +
Sbjct: 544 PAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGR 603

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            L++ +P D  ++I++SNMYA     DE  KVR  + +L L K  GCSWIE+  ++H FV
Sbjct: 604 LLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFV 663

Query: 718 ASGKDHPESEEIYSKLDLL 736
              K HP+++ IY  + +L
Sbjct: 664 VEDKSHPQADMIYECMSIL 682



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 260/522 (49%), Gaps = 21/522 (4%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G G +  G+ VH  ++KSG   D    ++ + +YAK N  + A KLFD M 
Sbjct: 109 YPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP 168

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R   +W ++I  Y  DG  E  L +  +M  S  K +  T + ++ +C+ L D   G++
Sbjct: 169 ERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKE 228

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   ++SGF  + FV ++L+ MY   GC   A+ VF  +  K+V   N MI  Y+  G+
Sbjct: 229 IHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD 288

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           S+    +F  +      P   T ++++  C  ++ ++ GK +HG  ++  V  +I V ++
Sbjct: 289 SKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSS 348

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G    AE +F  + + N++SW  +ISGYV+ G   +A+  F +    G+  D
Sbjct: 349 LIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPD 408

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLL 419
           +    +V+  CS  + LE G ++H F I+    +++V +G AL+D+YAK G +  A  + 
Sbjct: 409 AITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG-ALLDMYAKCGAVDEALHIF 467

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    +    + ++++ +         + + LF + + +  +PD VTF  +LS + S A 
Sbjct: 468 NQLPERDFVSWTSMIAAYGSH--GQAFEALKLFEKMQQSDAKPDKVTFLAILS-ACSHAG 524

Query: 480 LVRGRSLHAYSI--KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD--RDIVSWNA 535
           LV     +   +  + G+   V   + LI +  + G +  A++I +   D   D+   + 
Sbjct: 525 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLST 584

Query: 536 MLSAYALH-----GLGKGALLLFEEMKREGFAPDDISILGVL 572
           + SA  LH     G   G LL+ ++       PDD S   +L
Sbjct: 585 LFSACHLHKKLDLGEQIGRLLIEKD-------PDDPSTYIIL 619


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 218/671 (32%), Positives = 366/671 (54%), Gaps = 4/671 (0%)

Query: 69  IGSGDLKLGQAVHAFLLKSGS--QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           I  GD + G+AVH  +++ G   + D F AN L+N+Y K   L  A++LFD M  R+ ++
Sbjct: 70  IARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVS 129

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           + +L++ +   GD+E+   +   +     + N+   + +L+    ++       +H+ A 
Sbjct: 130 FVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW 189

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G ++N FVG+ LI  Y       +AE+VF G+  KD      M+  Y++    E AF 
Sbjct: 190 KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR 249

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           VF  +  S  +PN +  T+V+        V  GK +HG A+K     E  VG A++ MY 
Sbjct: 250 VFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYA 309

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  ++A   F+ I   ++I  + +IS Y +S    +A   FL  +   +  +   L++
Sbjct: 310 KCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSS 369

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+  C+    L+ G Q+H  AIK G+ SD+ +G AL+D YAK  D+ S+  +        
Sbjct: 370 VLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDAN 429

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N I+ GF +  +   E+ + +F + + A M    VT+S +L   AS A +     +
Sbjct: 430 EVSWNTIVVGFSQ--SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQI 487

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H    K+ +  D ++GN+LI  YAKCG I  A ++F+ + +RDI+SWNA++S YALHG  
Sbjct: 488 HCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQA 547

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             AL LF+ M +     +DI+ + +L  C  +GL   G+ LF+ +   +G++P +EH+ C
Sbjct: 548 ADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC 607

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           +V LLGRAGRL++A+  I   P + S ++WR L+S   +  N      +++++L++EP+D
Sbjct: 608 IVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQD 667

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
             +++L+SNMYA  G LD+ A +R +M ++ + K  G SW+EI  ++H F     DHP+ 
Sbjct: 668 ETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDM 727

Query: 727 EEIYSKLDLLN 737
             I + L+ LN
Sbjct: 728 RVINAMLEWLN 738



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 246/482 (51%), Gaps = 4/482 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K++I      L   VH+   K G  ++ F  + LI+ Y+  + +  A+ +F+G++ + 
Sbjct: 168 MLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKD 227

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           A+ WT+++  Y ++   E+   +   M  S  K N    + +L+A   L   + G+ IH 
Sbjct: 228 AVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHG 287

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK+  +    VG +L+ MY   G  ++A   F  + Y DV  ++FMI  Y ++ ++E 
Sbjct: 288 CAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQ 347

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           AF +F+ L+ S   PN+Y+ ++V+  C   + ++ GKQ+H  A+K G   ++ VGNA++ 
Sbjct: 348 AFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMD 407

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K    + + ++F ++ + N +SW  ++ G+ +SG G +A++ F E     + C    
Sbjct: 408 FYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVT 467

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            ++V+  C+  +++    Q+H    K  + +D  +G +L+D YAK G ++ A  +     
Sbjct: 468 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLM 527

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +NAI+SG+   +     D + LF +   + +E + +TF  LLS+ +S   +  G
Sbjct: 528 ERDIISWNAIISGY--ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585

Query: 484 RSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYA 541
            SL  +  I  G    +     ++ +  + G ++ A Q    I S    + W A+LS+  
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645

Query: 542 LH 543
           +H
Sbjct: 646 IH 647



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 19/285 (6%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS--DVRLGTALVDIYAKGGDLKSARM 417
           DS   A  + GC    +   G  +HG  ++ G +   D+     L+++Y K G L SAR 
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L D    +    F  ++    ++   D E    LF + R  G E +    + +L L+ + 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQR--GDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
                   +H+ + K G+  +  VG+ LI  Y+ C  +  A  +F GI  +D V W AM+
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA--CIYS-----GLSEGGICLFNE 590
           S Y+ +   + A  +F +M+  G  P+  ++  VL+A  C+ S     G+    I   N+
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            E   G          ++D+  + G + +A       P+ +  LL
Sbjct: 296 TEPHVG--------GALLDMYAKCGDIKDARLAFEMIPYDDVILL 332



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 47  SSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF 106
           + + C++ T     +  +++    +  ++    +H  + KS   NDT   N+LI+ YAK 
Sbjct: 459 AQMPCTQVT-----YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKC 513

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL 166
             +  A K+F  ++ R  I+W ++I GY   G     L +   M +S  + N+ T   +L
Sbjct: 514 GYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 573

Query: 167 EACS 170
             CS
Sbjct: 574 SVCS 577


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/676 (32%), Positives = 373/676 (55%), Gaps = 28/676 (4%)

Query: 70  GSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           G+ +L+LG+ VH + L++G   ++   A  LI  Y +F+ + V   LFD M+VR+ ++W 
Sbjct: 173 GASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWN 231

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++I GY D GDY   L +   M   E KF+  T  V ++AC+ L     G+QIH  AIK 
Sbjct: 232 AMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKF 291

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            F  ++++  +L++MY ++G    +  +F  +  +D    N MI  Y   G  E A  +F
Sbjct: 292 EFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLF 351

Query: 249 VHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           + + S   + ++ T   ++S+C E   G+ +GK LH   +K G+  + S+GNA+++MY +
Sbjct: 352 IRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTE 411

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
               E  +++FD +   ++ISW  +I    R+    +A   F    +  I  +S  + ++
Sbjct: 412 LNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISI 471

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C   + L+ G  +HG+ +KH    +  L TAL D+Y   GD  +AR L +G   +  
Sbjct: 472 LAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDL 531

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +NA++                          EP+ VT   +LS     A L +G+SLH
Sbjct: 532 ISWNAMI-----------------------XKAEPNSVTIINVLSSFTHLATLPQGQSLH 568

Query: 488 AYSIKTGYAA--DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           AY  + G++   D+ + NA ITMYA+CGS+  A  IFK +  R+I+SWNAM++ Y ++G 
Sbjct: 569 AYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGR 628

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G  A+L F +M  +GF P+ ++ + VL AC +SG  E G+ LF+ + Q + + P L H++
Sbjct: 629 GSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYS 688

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           C+VDLL R G + EA   I+S P      +WR L+S  +  +++K +    ++L  LEP 
Sbjct: 689 CIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPM 748

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           +AG+++L+SN+YA  G+  E  ++RT + +  L K  G SWI + +++H F A  + HP+
Sbjct: 749 NAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQ 808

Query: 726 SEEIYSKLDLLNDEMK 741
           S++IY+KL +L   M+
Sbjct: 809 SDKIYAKLSILLSSMR 824



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 144/603 (23%), Positives = 270/603 (44%), Gaps = 28/603 (4%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K       ++ G+++H  +  +   +D      +++ Y K   ++ A+ +FD M  
Sbjct: 64  PLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSD 123

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  + W +++ GY+  G YE  + +  +M R   + N  T   +L AC    +   G  +
Sbjct: 124 RDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGV 183

Query: 182 HAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           H + +++G F++N  V T+LI  Y      R    +F  +  +++   N MI  Y   G+
Sbjct: 184 HGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGD 242

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A  +FV +L  + + +  T    +  C E   ++ GKQ+H LA+KF  V ++ + NA
Sbjct: 243 YFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNA 302

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY  +G  E + ++F+++  R+   W ++IS Y   G   +A++ F+     G+  D
Sbjct: 303 LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKD 362

Query: 361 SSCLATVIDGC-SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
              +  ++  C  + S L  G  LH   IK G   D  LG AL+ +Y +   ++S + + 
Sbjct: 363 ERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIF 422

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D         +N ++                LF + R + ++P+  T   +L+      C
Sbjct: 423 DRMKGVDIISWNTMILALARNTL--RAQACELFERMRESEIKPNSYTIISILAACEDVTC 480

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  GRS+H Y +K     +  +  AL  MY  CG    A  +F+G  DRD++SWNAM+  
Sbjct: 481 LDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIX- 539

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI-YGLR 598
                            K E   P+ ++I+ VL +  +      G  L   + +  + L 
Sbjct: 540 -----------------KAE---PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLG 579

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
             L      + +  R G L  A N+  + P   + + W  +++   +      ++LA  +
Sbjct: 580 LDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAGYGMNGRGSDAMLAFSQ 638

Query: 659 LLD 661
           +L+
Sbjct: 639 MLE 641



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 257/546 (47%), Gaps = 17/546 (3%)

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W S+IK   +  + +++L     M       N  T  ++L+AC+       G+ IH    
Sbjct: 28  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
            +   ++V VGT+++  Y   G   +A  VF  ++ +DV   N M+  Y   G  E A  
Sbjct: 88  GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 147

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMY 305
           +   +   +  PN  T   ++  C     +  G+ +HG  ++ G+      V  A++  Y
Sbjct: 148 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 207

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            +  M      +FD +  RN++SW A+ISGY   G   KA+  F++ L   +  D   + 
Sbjct: 208 LRFDM-RVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 266

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
             +  C+   +L+LG Q+H  AIK  ++ D+ +  AL+++Y+  G L+S+  L +    +
Sbjct: 267 VAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR 326

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC-LVRGR 484
               +N+++S +        E+ M LF + +  G++ D  T   +LS+    A  L++G+
Sbjct: 327 DAPLWNSMISAY--AAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGK 384

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
           SLHA+ IK+G   D  +GNAL++MY +   ++   +IF  +   DI+SWN M+ A A + 
Sbjct: 385 SLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNT 444

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQA-----CIYSGLSEGGICLFNEIEQIYGLRP 599
           L   A  LFE M+     P+  +I+ +L A     C+  G S  G  + + IE    LR 
Sbjct: 445 LRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRT 504

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            L       D+    G  + A +L    P     + W  ++  ++  + +  ++L+S   
Sbjct: 505 AL------ADMYMNCGDEATARDLFEGCP-DRDLISWNAMIXKAEPNSVTIINVLSSFTH 557

Query: 660 LDLEPK 665
           L   P+
Sbjct: 558 LATLPQ 563



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 185/369 (50%), Gaps = 16/369 (4%)

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           KD +  N +I         +     +  + S    PN+ T   V+  C     VE GK +
Sbjct: 23  KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 82

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H       ++ ++ VG A+V  Y K G  E+A  +FDA+S+R+++ W A++ GYV  G  
Sbjct: 83  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 142

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTA 401
            +A+    E     +  +S  +  ++  C   S L LG  +HG+ +++G   S+  + TA
Sbjct: 143 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 202

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L+  Y +  D++   +L D    +    +NA++SG+ +    D    + LF Q     M 
Sbjct: 203 LIGFYLR-FDMRVLPLLFDLMVVRNIVSWNAMISGYYD--VGDYFKALELFVQ-----ML 254

Query: 462 PDPVTFSRLLSLSASQAC-----LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
            D V F  +  L A QAC     L  G+ +H  +IK  +  D+ + NAL+ MY+  GS++
Sbjct: 255 VDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLE 314

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC- 575
            + Q+F+ + +RD   WN+M+SAYA  G  + A+ LF  M+ EG   D+ +++ +L  C 
Sbjct: 315 SSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCE 374

Query: 576 -IYSGLSEG 583
            + SGL +G
Sbjct: 375 ELASGLLKG 383


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/662 (33%), Positives = 362/662 (54%), Gaps = 9/662 (1%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           L +     +T   N +I+ Y K   L  A+KLFDGM+ R+A+TWT LI GY     ++  
Sbjct: 74  LFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEA 133

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
             +   M R   + +  T   +L  C+  E      Q+    IK G+++ + VG +L+  
Sbjct: 134 FELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDS 193

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y  S     A  +F+ +   D    N MI  Y+K G  E A ++FV + +S  +P ++TF
Sbjct: 194 YCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTF 253

Query: 264 TNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
             V+     N+G+++   G+Q+H   +K   V  + V NA++  Y KH    +A ++FD 
Sbjct: 254 AAVLCA---NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDE 310

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + E++ +S+  +ISGY   G    A + F E             AT++   S   + E+G
Sbjct: 311 MPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMG 370

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q+H   I     S++ +G +LVD+YAK G  + A M+    + +    + A++S +++K
Sbjct: 371 RQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQK 430

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                E+ + LF++ R A +  D  TF+ LL  SAS A L  G+ LH++ IK+G+ ++V 
Sbjct: 431 --GFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVF 488

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
            G+AL+ +YAKCGSI  A Q F+ + DR+IVSWNAM+SAYA +G  +  L  F+EM   G
Sbjct: 489 SGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSG 548

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             PD +S LGVL AC +SGL E G+  FN + QIY L P  EH+A +VD+L R+GR +EA
Sbjct: 549 LQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEA 608

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGSFILVSNMYAG 679
             L+   P     ++W ++++  ++  N + +  A+ +L ++E  +DA  ++ +SN+YA 
Sbjct: 609 EKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAA 668

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE 739
            G  +  +KV   M D  + K    SW+EI  + H F A+ + HP+ EEI  K+D+L   
Sbjct: 669 AGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKT 728

Query: 740 MK 741
           M+
Sbjct: 729 ME 730



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 242/467 (51%), Gaps = 6/467 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           V   ++K G  +     N L++ Y K NRLD+A +LF  M    ++++ ++I GY  DG 
Sbjct: 171 VQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGL 230

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E  + +  +M  S  K  E T + +L A   L+D + G+QIH+F IK+ F  NVFV  +
Sbjct: 231 DEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNA 290

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+  Y       +A  +F  +  +D    N +I  Y   G+ + AF +F  L  + F+  
Sbjct: 291 LLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRK 350

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
            + F  ++S+    L  E G+Q+H   +      EI VGN++V MY K G  EEAE +F 
Sbjct: 351 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 410

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            ++ R+ + WTA+IS YV+ G   + +  F +     +  D +  A+++   +  ++L L
Sbjct: 411 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 470

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G QLH F IK G++S+V  G+AL+D+YAK G +K A         +    +NA++S + +
Sbjct: 471 GKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ 530

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
               + E  +  F +  L+G++PD V+F  +LS + S + LV     H  S+   Y  D 
Sbjct: 531 N--GEAEATLKSFKEMVLSGLQPDSVSFLGVLS-ACSHSGLVEEGLWHFNSMTQIYKLDP 587

Query: 500 IVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
              +  +++ M  + G  + A ++   +  D D + W+++L+A  +H
Sbjct: 588 RREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIH 634



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 175/386 (45%), Gaps = 35/386 (9%)

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA- 345
           VK G   + S  N  V  + K+G   +A ++F+ +  +N +S   +ISGYV+SG+ G+A 
Sbjct: 44  VKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEAR 103

Query: 346 -----------------------INGFLE----FLDLGICCDSSCLATVIDGCSVCSNLE 378
                                  +N F E    F+ +  C       T +   S C+  E
Sbjct: 104 KLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHE 163

Query: 379 LG---LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +G    Q+    IK GY S + +G  LVD Y K   L  A  L        +  +NA+++
Sbjct: 164 MGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMIT 223

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+ +   D  E  + LF + + +G++P   TF+ +L  +     +V G+ +H++ IKT +
Sbjct: 224 GYSKDGLD--EKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNF 281

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +V V NAL+  Y+K  S+  A ++F  + ++D VS+N ++S YA  G  K A  LF E
Sbjct: 282 VWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRE 341

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           ++   F         +L     +   E G  +  +         IL     +VD+  + G
Sbjct: 342 LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVG-NSLVDMYAKCG 400

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVS 641
           +  EA  +I ++    S + W  ++S
Sbjct: 401 KFEEA-EMIFTNLTHRSAVPWTAMIS 425



 Score = 45.8 bits (107), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 48/208 (23%)

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           M+ +  TF +  SL + +  L    ++ A  +KTG+  D    N  +  + K G +  A 
Sbjct: 13  MKKNVSTFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQAR 72

Query: 520 QIFKGISDRDIVSWNAMLSAYALHG-LG------------------------------KG 548
           Q+F+ +  ++ VS N M+S Y   G LG                              K 
Sbjct: 73  QLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKE 132

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI--------YGLRPI 600
           A  LF +M+R G  PD ++ + +L  C        G  + N+I Q+        Y  R I
Sbjct: 133 AFELFVQMQRCGTEPDYVTFVTLLSGC-------NGHEMGNQITQVQTQIIKLGYDSRLI 185

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSP 628
           + +   +VD   ++ RL  A  L    P
Sbjct: 186 VGN--TLVDSYCKSNRLDLACQLFKEMP 211


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/692 (33%), Positives = 379/692 (54%), Gaps = 20/692 (2%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           D  +L+  +  +GDL+LG+A+H  LL+S     D   AN+L+ +Y+K   ++ A+++FD 
Sbjct: 42  DAAKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQ 101

Query: 119 ML-VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED-RI 176
           M  VR  ++WT++      +G     L +  +M     + N  T      AC   E  R+
Sbjct: 102 MCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRL 161

Query: 177 FGEQIHAFAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
            G  +  F +K+GF   +V VG +LI M+  +G    A+ VF GL  +       +I  Y
Sbjct: 162 AGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRY 221

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            +AG +     +F+H+L   FEP+ Y+ +++IS C E   V  G+QLH +A++ G+V + 
Sbjct: 222 VQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDS 281

Query: 296 SVGNAIVTMYGKHGMS---EEAERMFDAISERNLISWTALISGYVRSG-HGGKAINGFLE 351
            V   +V MY K  M    E A ++F  +   N++SWTALISGYV+SG      +  F E
Sbjct: 282 CVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFRE 341

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
            L+  I  +    + ++  C+  S+ + G Q+H   +K        +G ALV +YA+ G 
Sbjct: 342 MLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGC 401

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP--DPVTFSR 469
           ++ AR   D        E N      +    D E +        ++ GM+      TF+ 
Sbjct: 402 MEEARKAFDQLY-----ETN-----ILSMSPDVETERNNASCSSKIEGMDDGVSTFTFAS 451

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           LLS +AS   L +G+ LHA S+K G+ +D  + N+L++MYA+CG ++ A + F  + D +
Sbjct: 452 LLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHN 511

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           ++SW +++S  A HG  K AL +F +M   G  P+D++ + VL AC + GL + G   F 
Sbjct: 512 VISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFR 571

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            +++ +GL P +EH+AC+VDLL R+G + EA   IN  P     L+W+TL+S  +   N+
Sbjct: 572 SMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNT 631

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +   +A+  +++LEP+D   ++L+SN+YA  G+ DE A++R+ M D  LSKE G SW+++
Sbjct: 632 EIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDV 691

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            + +H F A    HP + +IY+KL  L  E+K
Sbjct: 692 GNTIHEFRAGDTSHPLAIDIYAKLVTLIREIK 723


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/672 (33%), Positives = 364/672 (54%), Gaps = 4/672 (0%)

Query: 74  LKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           L+ G  VHA  +       +T   N +I+ + KF +L  A++LFDGM+ R+A++WT LI 
Sbjct: 54  LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GYL     +    +  DM R   + +  T   +L     LE +    QIH   IK G+E 
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N+ V  SL+  Y  + C   A  +F+ +  KD    N ++  Y+  G +E A  +F+ L 
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +S  +P+D+TF  ++S        + G+Q+HG  +K   V  + VGNA++  Y KH   +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           E  ++F  + E + IS+  +I+ Y  +G   ++ + F +             AT++   +
Sbjct: 294 EVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT 353

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              NL +G Q+H  AI  G   + R+  ALVD+YAK    K A+ + D  +CK T  + A
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++S +++K    EE + V FS  R  G+  D  TF+ +L   A+ A +  GR LH+  I+
Sbjct: 414 MISAYVQK-GKHEEGINV-FSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +G+ ++V  G+AL+  YAKCG +  A + F  + +R+ VSWNA++SAYA +G   G L  
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNS 531

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F++M + G+ PD +S L VL AC + G  E  +  FN + QIY + P  EH+  MVD+L 
Sbjct: 532 FQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLC 591

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGSFI 671
           R GR  EA  L+   PF  S ++W ++++  ++  N + +  A+ RL ++E  +DA  +I
Sbjct: 592 RNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
            +SN+YA  G  D  AKV+  M D  + K    SW+EI  + H F A+ K HPE ++I  
Sbjct: 652 NMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILR 711

Query: 732 KLDLLNDEMKLK 743
           K++ L+ EM+ K
Sbjct: 712 KINALSKEMEKK 723



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 222/416 (53%), Gaps = 5/416 (1%)

Query: 60  DWPQLVKISIGSGDLKLGQAV---HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           D+  LV +  G G+L+    +   H  ++K G + +    N+L++ Y K + L +A +LF
Sbjct: 139 DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLF 198

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
             ML +  +T+ SL+ GY ++G  E  + +  +++ S  K ++ T + +L A   L+D  
Sbjct: 199 KHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTK 258

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           FG+Q+H F +K+ F  NVFVG +L+  Y       E   +F  +   D    N +I  Y 
Sbjct: 259 FGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYA 318

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             G+ + +F +F  L  + F+   + F  ++S+   +L +  G+Q+H  A+  G   E  
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V NA+V MY K    +EA+++FD I+ ++ + WTA+IS YV+ G   + IN F +    G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D +  A+++  C+  +++ LG QLH   I+ G++S+V  G+AL+D YAK G +  A 
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAI 498

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
                   + +  +NA++S + +    + +  +  F Q   +G +PD V+F  +LS
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQN--GNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 199/463 (42%), Gaps = 68/463 (14%)

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA- 345
           VK G        N  V  + + G    A ++FD +  +N IS   +ISG+++ G   KA 
Sbjct: 35  VKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKAR 94

Query: 346 -----------------INGFLE----------FLDL---GICCDSSCLATVIDGCSVCS 375
                            I G+L+          + D+   GI  D   L T++ G     
Sbjct: 95  ELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELE 154

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
              + +Q+H   IK GY  ++ +  +LVD Y K   L  A  L      K T  FN++++
Sbjct: 155 TKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMT 214

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+  +  +  E+ + LF +   +G++P   TF+ LLS +        G+ +H + +KT +
Sbjct: 215 GYSNEGLN--EEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNF 272

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +V VGNAL+  Y+K   +D   ++F  + + D +S+N ++++YA +G  K +  LF +
Sbjct: 273 VWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRK 332

Query: 556 MKREGFAPDDI---SILGVLQACIYSGLSEGGIC------------LFNEIEQIYG---- 596
           ++   F        ++L +  + +   +     C            + N +  +Y     
Sbjct: 333 LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG 392

Query: 597 ---LRPILEHFAC--------MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
               + I ++ AC        M+    + G+  E +N+ +    +  P    T  S+ + 
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRA 452

Query: 646 MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAK 688
            AN   SI   ++L  L  +       +SN+Y+G  +LD  AK
Sbjct: 453 CANLA-SISLGRQLHSLLIRSG----FMSNVYSGSALLDTYAK 490


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/710 (31%), Positives = 374/710 (52%), Gaps = 33/710 (4%)

Query: 25  KKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDL-KLGQAVHAF 83
           KKV  N  + +  S VA +  +S     E  +L   + Q+V  +    +  + G+ +H  
Sbjct: 219 KKVFENLKARDSVSWVAMISGLSQNGYEEEAMLL--FCQIVLSACTKVEFFEFGKQLHGL 276

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           +LK G  ++T+  N L+ LY++   L  A+++F  M  R  +++ SLI G    G     
Sbjct: 277 VLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRA 336

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
           L +   M    +K +  T + +L AC+ +     G+Q H++AIK+G  +++ V  SL+ +
Sbjct: 337 LALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDL 396

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y               +   D++  +   L Y +      +F +F  +      PN +T+
Sbjct: 397 Y---------------VKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTY 441

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
            +++  C      + G+Q+H   +K G    + V + ++ MY KHG  + A ++F  + E
Sbjct: 442 PSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE 501

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
            +++SWTA+I+GY +     +A+N F E  D GI  D+   A+ I  C+    L+ G Q+
Sbjct: 502 NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI 561

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           H  +   GY  D+ +G ALV +YA+ G ++ A    D    K    +N+++SGF +  + 
Sbjct: 562 HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQ--SG 619

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
             E+ + +F+Q   AG+E +  TF   +S +A+ A +  G+ +H    KTGY ++  V N
Sbjct: 620 YFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSN 679

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           ALIT+YAKCG+ID              +SWN+M++ Y+ HG G  AL LFE+MK+    P
Sbjct: 680 ALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLP 726

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           + ++ +GVL AC + GL + GI  F  + + + L P  EH+AC+VDLLGR+G LS A   
Sbjct: 727 NHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRF 786

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
           +   P     ++WRTL+S   +  N      A+  LL+LEPKD+ +++LVSNMYA  G  
Sbjct: 787 VEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKW 846

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           D   + R  M D  + KE G SW+E+D+ +H F A  ++HP ++ IY  L
Sbjct: 847 DCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYL 896



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 169/559 (30%), Positives = 271/559 (48%), Gaps = 54/559 (9%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           ++   LI+ Y  F  L+ A  +FD M +RS   W  +   ++ +     V G+   M   
Sbjct: 98  YDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTK 157

Query: 154 EEKFNEHTCSVILEACS--LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
             +F+E   +V+L  CS   +  R F EQIHA  I SGFE++ F+   LI +YF +G   
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFR-FVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLS 216

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
            A+ VF  L  +D      MI   ++ G  E A  +F  +              V+S C 
Sbjct: 217 SAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACT 262

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
           +    E GKQLHGL +K G   E  V NA+VT+Y + G    AE++F  +S+R+ +S+ +
Sbjct: 263 KVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNS 322

Query: 332 LISGYVRSGHGGKAINGFLEF-LDLGICCDSSC--LATVIDGCSVCSNLELGLQLHGFAI 388
           LISG  + G+  +A+  F +  LD   C    C  +A+++  C+    L  G Q H +AI
Sbjct: 323 LISGLAQQGYINRALALFKKMNLD---CQKPDCVTVASLLSACASVGALPNGKQFHSYAI 379

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           K G  SD+ +  +L+D+Y K  D+K+A    + F C    + + +   F           
Sbjct: 380 KAGMTSDIVVEGSLLDLYVKCSDIKTAH---EFFLC--YGQLDNLNKSFQ---------- 424

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
             +F+Q ++ G+ P+  T+  +L    +      G  +H   +KTG+  +V V + LI M
Sbjct: 425 --IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDM 482

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           YAK G +D A +IF+ + + D+VSW AM++ Y  H     AL LF+EM+ +G   D+I  
Sbjct: 483 YAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGF 542

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIY------GLRPILEHFACMVDLLGRAGRLSEAMN 622
              + AC        GI   ++  QI+      G    L     +V L  R G++ EA  
Sbjct: 543 ASAISAC-------AGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYA 595

Query: 623 LINSSPFSESPLLWRTLVS 641
             +   +++  + W +LVS
Sbjct: 596 AFD-QIYAKDNVSWNSLVS 613



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 239/487 (49%), Gaps = 31/487 (6%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            +  + +HA  + SG ++ TF  N LI+LY K   L  A+K+F+ +  R +++W ++I G
Sbjct: 180 FRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISG 239

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
              +G  E  + +               C ++L AC+ +E   FG+Q+H   +K GF + 
Sbjct: 240 LSQNGYEEEAMLL--------------FCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSE 285

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            +V  +L+++Y  SG    AE +F  ++ +D    N +I    + G    A  +F  +  
Sbjct: 286 TYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNL 345

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +P+  T  +++S C     +  GKQ H  A+K G+  +I V  +++ +Y K    + 
Sbjct: 346 DCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKT 405

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A   F    + + ++               K+   F +    GI  +     +++  C+ 
Sbjct: 406 AHEFFLCYGQLDNLN---------------KSFQIFTQMQIEGIVPNQFTYPSILKTCTT 450

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
               +LG Q+H   +K G+  +V + + L+D+YAK G L  A  +           + A+
Sbjct: 451 LGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAM 510

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++G+ +   D   + + LF + +  G++ D + F+  +S  A    L +GR +HA S  +
Sbjct: 511 IAGYTQH--DKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLS 568

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY+ D+ +GNAL+++YA+CG +  A+  F  I  +D VSWN+++S +A  G  + AL +F
Sbjct: 569 GYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIF 628

Query: 554 EEMKREG 560
            +M + G
Sbjct: 629 AQMNKAG 635


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/675 (33%), Positives = 379/675 (56%), Gaps = 18/675 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV--RSAITWTSLIKGY 134
           G+ +HA +LK+GS +  +  N  +NLYAK N L  A  LFD +    +  ++W SLI  +
Sbjct: 30  GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAF 89

Query: 135 LDDGDYESVLGIACDMYRSEEKFNE-----HTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
                  S    A  ++R   + N      HT + +  A S L D + G+Q H+ A+K+G
Sbjct: 90  -SQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTG 148

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
              +V+VG+SL++MY  +G   +A  +F  +  ++      MI  Y  +  ++ A  VF 
Sbjct: 149 CSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFE 208

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +   +   N++  T+V+S    ++ V  G+Q+H LA+K G++  +SV NA+VTMY K G
Sbjct: 209 LMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCG 268

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             ++A R F+   ++N I+W+A+++GY + G   KA+  F +    G+      L  VI+
Sbjct: 269 SLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVIN 328

Query: 370 GCS-VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            CS +C+ +E G Q+H FA K G+   + + +A+VD+YAK G L  AR    GF C    
Sbjct: 329 ACSDLCAVVE-GKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADAR---KGFECVQQP 384

Query: 429 E---FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
           +   + +I++G+++    D E  + L+ + ++  + P+ +T + +L   +S A L +G+ 
Sbjct: 385 DVVLWTSIITGYVQN--GDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQ 442

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +HA  IK G+  +V +G+AL  MY KCGS+D  + IF  +  RD++SWNAM+S  + +G 
Sbjct: 443 MHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGH 502

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G  AL LFE+M  EG  PD ++ + +L AC + GL + G   F  +   + + P++EH+A
Sbjct: 503 GNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYA 562

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           CMVD+L RAG+L+EA   I S+       LWR L+   K   N +  + A ++L++L   
Sbjct: 563 CMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSP 622

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           ++ +++L+S++Y   G  +   +VR  M    ++KE GCSWIE+   +H FV     HP+
Sbjct: 623 ESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQ 682

Query: 726 SEEIYSKLDLLNDEM 740
            +EI  +L+LL   M
Sbjct: 683 VDEIRLELELLTKLM 697



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 240/476 (50%), Gaps = 10/476 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D+  G+  H+  +K+G   D +  ++L+N+Y K   +  A+KLFD M  R+ ++W ++I 
Sbjct: 133 DVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMIS 192

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF---GEQIHAFAIKSG 189
           GY      +  + +   M R EE  NE   + +L A   L   +F   G Q+H+ AIK+G
Sbjct: 193 GYASSDIADKAVEVFELMRREEEIQNEFALTSVLSA---LTSDVFVYTGRQVHSLAIKNG 249

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
               V V  +L++MY   G   +A   F     K+    + M+  Y + G+S+ A  +F 
Sbjct: 250 LLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFN 309

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            + SS   P+++T   VI+ C +   V EGKQ+H  A K G   ++ V +A+V MY K G
Sbjct: 310 KMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCG 369

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              +A + F+ + + +++ WT++I+GYV++G     +N + +     +  +   +A+V+ 
Sbjct: 370 SLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLR 429

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS  + L+ G Q+H   IK+G+  +V +G+AL  +Y K G L    ++      +    
Sbjct: 430 ACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVIS 489

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA++SG  +    ++   + LF +  L G++PDPVTF  LLS  +    + RG      
Sbjct: 490 WNAMISGLSQNGHGNK--ALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKM 547

Query: 490 SIKTGYAADVIVGNA-LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
                  A ++   A ++ + ++ G ++ A +  +  + D  +  W  +L A   H
Sbjct: 548 MFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNH 603



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 264/534 (49%), Gaps = 11/534 (2%)

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C+  ++ + G  +HA  +K+G  ++++V  + +++Y  +     A  +F  +   D   V
Sbjct: 21  CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80

Query: 229 NFMIL-----EYNKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           ++  L     + + +  S  A  +F  ++ +++  PN +T   V S       V  GKQ 
Sbjct: 81  SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H +AVK G   ++ VG++++ MY K G   +A ++FD + ERN +SW  +ISGY  S   
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            KA+  F          +   L +V+   +    +  G Q+H  AIK+G L+ V +  AL
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANAL 260

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           V +YAK G L  A    +    K +  ++A+++G+ +    D +  + LF++   +G+ P
Sbjct: 261 VTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQ--GGDSDKALKLFNKMHSSGVLP 318

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
              T   +++  +    +V G+ +H+++ K G+   + V +A++ MYAKCGS+  A + F
Sbjct: 319 SEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGF 378

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           + +   D+V W ++++ Y  +G  +G L L+ +M+ E   P+++++  VL+AC      +
Sbjct: 379 ECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALD 438

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS- 641
            G  +   I + YG +  +   + +  +  + G L +   +    P S   + W  ++S 
Sbjct: 439 QGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMP-SRDVISWNAMISG 496

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           +S+    +K   L  K LL+    D  +F+ + +  +  G++D   +    M D
Sbjct: 497 LSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFD 550



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 186/378 (49%), Gaps = 23/378 (6%)

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           F P        +  C  N  + +G+ LH   +K G +  I V N  + +Y K      A 
Sbjct: 7   FPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHAL 66

Query: 316 RMFDAI--SERNLISWTALISGYVRSGHGGK---AINGFLEFLDL-GICCDSSCLATVID 369
            +FD+I  ++++ +SW +LI+ + ++        AI+ F   +    +  ++  LA V  
Sbjct: 67  TLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFS 126

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             S  S++  G Q H  A+K G   DV +G++L+++Y K G +  AR L D    + T  
Sbjct: 127 AASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVS 186

Query: 430 FNAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           +  ++SG+    IAD   +V  L  ++     E      + +LS   S   +  GR +H+
Sbjct: 187 WATMISGYASSDIADKAVEVFELMRREEEIQNE---FALTSVLSALTSDVFVYTGRQVHS 243

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            +IK G  A V V NAL+TMYAKCGS+D A + F+   D++ ++W+AM++ YA  G    
Sbjct: 244 LAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDK 303

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPILE 602
           AL LF +M   G  P + +++GV+ AC         +C   E +Q++      G    L 
Sbjct: 304 ALKLFNKMHSSGVLPSEFTLVGVINAC-------SDLCAVVEGKQMHSFAFKLGFGLQLY 356

Query: 603 HFACMVDLLGRAGRLSEA 620
             + +VD+  + G L++A
Sbjct: 357 VLSAVVDMYAKCGSLADA 374


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/671 (32%), Positives = 366/671 (54%), Gaps = 4/671 (0%)

Query: 69  IGSGDLKLGQAVHAFLLKSGS--QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           I  GD + G+AVH  +++ G   + D F AN L+N+Y K   L  A++LFD M  R+ ++
Sbjct: 70  IARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVS 129

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           + +L++ +   GD+E+   +   +     + N+   + +L+    ++       +H+ A 
Sbjct: 130 FVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW 189

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G ++N FVG+ LI  Y       +AE+VF G+  KD      M+  Y++    E AF 
Sbjct: 190 KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR 249

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           VF  +  S  +PN +  T+V+        V  GK +HG A+K     E  VG A++ MY 
Sbjct: 250 VFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYA 309

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  ++A   F+ I   ++I  + +IS Y +S    +A   FL  +   +  +   L++
Sbjct: 310 KCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSS 369

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+  C+    L+ G Q+H  AIK G+ SD+ +G AL+D YAK  D+ S+  +        
Sbjct: 370 VLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDAN 429

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N I+ GF +  +   E+ + +F + + A M    VT+S +L   AS A +     +
Sbjct: 430 EVSWNTIVVGFSQ--SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQI 487

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H    K+ +  D ++GN+LI  YAKCG I  A ++F+ + +RDI+SWNA++S YALHG  
Sbjct: 488 HCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQA 547

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             AL LF+ M +     +DI+ + +L  C  +GL   G+ LF+ +   +G++P +EH+ C
Sbjct: 548 ADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC 607

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           +V LLGRAGRL++A+  I   P + S ++WR L+S   +  N      +++++L++EP+D
Sbjct: 608 IVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQD 667

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
             +++L+SNMYA  G LD+ A +R +M ++ + K  G SW+EI  ++H F     DHP+ 
Sbjct: 668 ETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDM 727

Query: 727 EEIYSKLDLLN 737
             I + L+ LN
Sbjct: 728 RVINAMLEWLN 738



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 246/482 (51%), Gaps = 4/482 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K++I      L   VH+   K G  ++ F  + LI+ Y+  + +  A+ +F+G++ + 
Sbjct: 168 MLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKD 227

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           A+ WT+++  Y ++   E+   +   M  S  K N    + +L+A   L   + G+ IH 
Sbjct: 228 AVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHG 287

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK+  +    VG +L+ MY   G  ++A   F  + Y DV  ++FMI  Y ++ ++E 
Sbjct: 288 CAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQ 347

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           AF +F+ L+ S   PN+Y+ ++V+  C   + ++ GKQ+H  A+K G   ++ VGNA++ 
Sbjct: 348 AFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMD 407

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K    + + ++F ++ + N +SW  ++ G+ +SG G +A++ F E     + C    
Sbjct: 408 FYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVT 467

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            ++V+  C+  +++    Q+H    K  + +D  +G +L+D YAK G ++ A  +     
Sbjct: 468 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLM 527

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +NAI+SG+   +     D + LF +   + +E + +TF  LLS+ +S   +  G
Sbjct: 528 ERDIISWNAIISGY--ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585

Query: 484 RSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYA 541
            SL  +  I  G    +     ++ +  + G ++ A Q    I S    + W A+LS+  
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645

Query: 542 LH 543
           +H
Sbjct: 646 IH 647



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 19/285 (6%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS--DVRLGTALVDIYAKGGDLKSARM 417
           DS   A  + GC    +   G  +HG  ++ G +   D+     L+++Y K G L SAR 
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L D    +    F  ++    ++   D E    LF + R  G E +    + +L L+ + 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQR--GDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
                   +H+ + K G+  +  VG+ LI  Y+ C  +  A  +F GI  +D V W AM+
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA--CIYS-----GLSEGGICLFNE 590
           S Y+ +   + A  +F +M+  G  P+  ++  VL+A  C+ S     G+    I   N+
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            E   G          ++D+  + G + +A       P+ +  LL
Sbjct: 296 TEPHVG--------GALLDMYAKCGDIKDARLAFEMIPYDDVILL 332



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 47  SSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF 106
           + + C++ T     +  +++    +  ++    +H  + KS   NDT   N+LI+ YAK 
Sbjct: 459 AQMPCTQVT-----YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKC 513

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL 166
             +  A K+F  ++ R  I+W ++I GY   G     L +   M +S  + N+ T   +L
Sbjct: 514 GYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 573

Query: 167 EACS 170
             CS
Sbjct: 574 SVCS 577


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/655 (32%), Positives = 354/655 (54%), Gaps = 3/655 (0%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
           SQ D  E+N  +    K   L  A+++FD M  +  I+WT+LI GY++  D    L +  
Sbjct: 45  SQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFK 104

Query: 149 DM-YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
           +M   S  + +    S+  +AC L  D  +GE +H +A+K+G  N+VFVG++L+ MY  +
Sbjct: 105 NMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKN 164

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
           G   E   VF  +  ++V     +I    +AG ++ A   F  +  S  E + YTF   +
Sbjct: 165 GKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIAL 224

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
             C ++  +  G+++H  A+K G      V N + TMY K G  E    +F+ +S R+++
Sbjct: 225 KACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVV 284

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           SWT +I+  V+ G    A+  F+   +  +  +    A VI GC+  + +E G QLH   
Sbjct: 285 SWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           +  G  + + +  +++ +YAK G L S+ ++    + +    ++ I++G+ +       +
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQ--GGHVSE 402

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
              L S  R+ G +P     + +LS   + A L  G+ LHAY +  G     +V +ALI 
Sbjct: 403 AFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALIN 462

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY KCGSI+ A +IF    + DIVSW AM++ YA HG  +  + LFE++ R G  PD ++
Sbjct: 463 MYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVT 522

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            +GVL AC ++GL + G   FN + + Y + P  EH+ CM+DLL RAGRLS+A ++I + 
Sbjct: 523 FIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAM 582

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           PF    ++W TL+   ++  + +     ++R+L LEP  AG+ I ++N+YA +G   EAA
Sbjct: 583 PFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAA 642

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
            +R  M    + KE G SWI++   +  FVA  + HP+ E+IY+ LDLL    +L
Sbjct: 643 DIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTEL 697



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 246/478 (51%), Gaps = 8/478 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           + D+  G+ +H + +K+G  N  F  + L+++Y K  ++   +++F  M +R+ ++WT++
Sbjct: 129 NSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAI 188

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G +  G  +  L    +M+RS  +++ +T ++ L+AC+      +G +IHA A+K GF
Sbjct: 189 ITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGF 248

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + + FV  +L +MY   G       +F  ++ +DV     +I    + G+ E A   F+ 
Sbjct: 249 DVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIR 308

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  SD  PN+YTF  VIS C     +E G+QLH L +  G+   +SV N+I+TMY K G 
Sbjct: 309 MRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQ 368

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVID 369
              +  +F  ++ R+++SW+ +I+GY + GH  +A    L ++ + G       LA+V+ 
Sbjct: 369 LTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFE-LLSWMRMEGPKPTEFALASVLS 427

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C   + LE G QLH + +  G      + +AL+++Y K G ++ A  + D         
Sbjct: 428 ACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVS 487

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR--GRSLH 487
           + A+++G+ E     E  V+ LF +    G+ PD VTF  +LS + S A LV       +
Sbjct: 488 WTAMINGYAEHGYSRE--VIDLFEKIPRVGLRPDSVTFIGVLS-ACSHAGLVDLGFHYFN 544

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           A S K   +        +I +  + G +  A  + + +   RD V W+ +L A  +HG
Sbjct: 545 AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHG 602



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 173/359 (48%), Gaps = 1/359 (0%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K    SG L  G+ +HA  +K G    +F AN L  +Y K  +L+    LF+ M +R  
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WT++I   +  G  E  +     M  S+   NE+T + ++  C+ L    +GEQ+HA 
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHAL 343

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +  G   ++ V  S+++MY   G    +  +F  +  +D+   + +I  Y + G    A
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEA 403

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F +   +     +P ++   +V+S C     +E GKQLH   +  G+     V +A++ M
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  EEA R+FDA    +++SWTA+I+GY   G+  + I+ F +   +G+  DS   
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYAKGGDLKSARMLLDGF 422
             V+  CS    ++LG        K   +S  +     ++D+  + G L  A  +++  
Sbjct: 524 IGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAM 582


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/655 (32%), Positives = 354/655 (54%), Gaps = 3/655 (0%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
           SQ D  E+N  +    K   L  A+++FD M  +  I+WT+LI GY++  D    L +  
Sbjct: 45  SQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFK 104

Query: 149 DM-YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
           +M   S  + +    S+  +AC L  D  +GE +H +A+K+G  N+VFVG++L+ MY  +
Sbjct: 105 NMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKN 164

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
           G   E   VF  +  ++V     +I    +AG ++ A   F  +  S  E + YTF   +
Sbjct: 165 GKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIAL 224

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
             C ++  +  G+++H  A+K G      V N + TMY K G  E    +F+ +S R+++
Sbjct: 225 KACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVV 284

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           SWT +I+  V+ G    A+  F+   +  +  +    A VI GC+  + +E G QLH   
Sbjct: 285 SWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           +  G  + + +  +++ +YAK G L S+ ++    + +    ++ I++G+ +       +
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQ--GGHVSE 402

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
              L S  R+ G +P     + +LS   + A L  G+ LHAY +  G     +V +ALI 
Sbjct: 403 AFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALIN 462

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY KCGSI+ A +IF    + DIVSW AM++ YA HG  +  + LFE++ R G  PD ++
Sbjct: 463 MYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVT 522

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            +GVL AC ++GL + G   FN + + Y + P  EH+ CM+DLL RAGRLS+A ++I + 
Sbjct: 523 FIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAM 582

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           PF    ++W TL+   ++  + +     ++R+L LEP  AG+ I ++N+YA +G   EAA
Sbjct: 583 PFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAA 642

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
            +R  M    + KE G SWI++   +  FVA  + HP+ E+IY+ LDLL    +L
Sbjct: 643 DIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTEL 697



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 247/478 (51%), Gaps = 8/478 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           + D+  G+ +H + +K+G  N  F  + L+++Y K  ++   +++F  M +R+ ++WT++
Sbjct: 129 NSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAI 188

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G +  G  +  L    +M+RS  +++ +T ++ L+AC+      +G +IHA A+K GF
Sbjct: 189 ITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGF 248

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + + FV  +L +MY   G       +F  ++ +DV     +I    + G+ E A   F+ 
Sbjct: 249 DVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIR 308

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  SD  PN+YTF  VIS C     +E G+QLH L +  G+   +SV N+I+TMY K G 
Sbjct: 309 MRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQ 368

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVID 369
              +  +F  ++ R+++SW+ +I+GY + GH  +A    L ++ + G       LA+V+ 
Sbjct: 369 LTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFE-LLSWMRMEGPKPTEFALASVLS 427

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C   + LE G QLH + +  G      + +AL+++Y K G ++ A  + D         
Sbjct: 428 ACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVS 487

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR--GRSLH 487
           + A+++G+ E     E  V+ LF +    G+ PD VTF  +LS + S A LV    R  +
Sbjct: 488 WTAMINGYAEHGYSRE--VIDLFEKIPRVGLRPDSVTFIGVLS-ACSHAGLVDLGFRYFN 544

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           A S K   +        +I +  + G +  A  + + +   RD V W+ +L A  +HG
Sbjct: 545 AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHG 602



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 175/359 (48%), Gaps = 1/359 (0%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K    SG L  G+ +HA  +K G    +F AN L  +Y K  +L+    LF+ M +R  
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WT++I   +  G  E  +     M  S+   NE+T + ++  C+ L    +GEQ+HA 
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHAL 343

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +  G   ++ V  S+++MY   G    +  +F  +  +D+   + +I  Y++ G    A
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEA 403

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F +   +     +P ++   +V+S C     +E GKQLH   +  G+     V +A++ M
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  EEA R+FDA    +++SWTA+I+GY   G+  + I+ F +   +G+  DS   
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYAKGGDLKSARMLLDGF 422
             V+  CS    ++LG +      K   +S  +     ++D+  + G L  A  +++  
Sbjct: 524 IGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAM 582


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/672 (33%), Positives = 364/672 (54%), Gaps = 4/672 (0%)

Query: 74  LKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           L+ G  VHA  +       +T   N +I+ + KF +L  A++LFDGM+ R+A++WT LI 
Sbjct: 54  LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GYL     +    +  DM R   + +  T   +L     LE +    QIH   IK G+E 
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N+ V  SL+  Y  + C   A  +F+ +  KD    N ++  Y+  G +E A  +F+ L 
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +S  +P+D+TF  ++S        + G+Q+HG  +K   V  + VGNA++  Y KH   +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           E  ++F  + E + IS+  +I+ Y  +G   ++ + F +             AT++   +
Sbjct: 294 EVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT 353

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              NL +G Q+H  AI  G   + R+  ALVD+YAK    K A+ + D  +CK T  + A
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++S +++K    EE + V FS  R  G+  D  TF+ +L   A+ A +  GR LH+  I+
Sbjct: 414 MISAYVQK-GKHEEGINV-FSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +G+ ++V  G+AL+  YAKCG +  A + F  + +R+ VSWNA++SAYA +G   G L  
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNS 531

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F++M + G+ PD +S L VL AC + G  E  +  FN + QIY + P  EH+  MVD+L 
Sbjct: 532 FQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLC 591

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGSFI 671
           R GR  EA  L+   PF  S ++W ++++  ++  N + +  A+ RL ++E  +DA  +I
Sbjct: 592 RNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
            +SN+YA  G  D  AKV+  M D  + K    SW+EI  + H F A+ K HPE ++I  
Sbjct: 652 NMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILR 711

Query: 732 KLDLLNDEMKLK 743
           K++ L+ EM+ K
Sbjct: 712 KINALSKEMEKK 723



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 222/416 (53%), Gaps = 5/416 (1%)

Query: 60  DWPQLVKISIGSGDLKLGQAV---HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           D+  LV +  G G+L+    +   H  ++K G + +    N+L++ Y K + L +A +LF
Sbjct: 139 DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLF 198

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
             ML +  +T+ SL+ GY ++G  E  + +  +++ S  K ++ T + +L A   L+D  
Sbjct: 199 KHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTK 258

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           FG+Q+H F +K+ F  NVFVG +L+  Y       E   +F  +   D    N +I  Y 
Sbjct: 259 FGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYA 318

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             G+ + +F +F  L  + F+   + F  ++S+   +L +  G+Q+H  A+  G   E  
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V NA+V MY K    +EA+++FD I+ ++ + WTA+IS YV+ G   + IN F +    G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D +  A+++  C+  +++ LG QLH   I+ G++S+V  G+AL+D YAK G +  A 
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAI 498

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
                   + +  +NA++S + +    + +  +  F Q   +G +PD V+F  +LS
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQN--GNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 199/463 (42%), Gaps = 68/463 (14%)

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA- 345
           VK G        N  V  + + G    A ++FD +  +N IS   +ISG+++ G   KA 
Sbjct: 35  VKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKAR 94

Query: 346 -----------------INGFLE----------FLDL---GICCDSSCLATVIDGCSVCS 375
                            I G+L+          + D+   GI  D   L T++ G     
Sbjct: 95  ELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELE 154

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
              + +Q+H   IK GY  ++ +  +LVD Y K   L  A  L      K T  FN++++
Sbjct: 155 TKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMT 214

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+  +  +  E+ + LF +   +G++P   TF+ LLS +        G+ +H + +KT +
Sbjct: 215 GYSNEGLN--EEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNF 272

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +V VGNAL+  Y+K   +D   ++F  + + D +S+N ++++YA +G  K +  LF +
Sbjct: 273 VWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRK 332

Query: 556 MKREGFAPDDI---SILGVLQACIYSGLSEGGIC------------LFNEIEQIYG---- 596
           ++   F        ++L +  + +   +     C            + N +  +Y     
Sbjct: 333 LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG 392

Query: 597 ---LRPILEHFAC--------MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
               + I ++ AC        M+    + G+  E +N+ +    +  P    T  S+ + 
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRA 452

Query: 646 MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAK 688
            AN   SI   ++L  L  +       +SN+Y+G  +LD  AK
Sbjct: 453 CANLA-SISLGRQLHSLLIRSG----FMSNVYSGSALLDTYAK 490


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/683 (32%), Positives = 378/683 (55%), Gaps = 14/683 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++ +I + +L LG+  HA ++ SGS  D F +NNL+ +Y+K   L  A+++FD    R 
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 124 AITWTSLIKGYL-----DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
            +TW +++  Y      +DG+ +  L +   +  S       T + +L+ C         
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           E +H +AIK G E +VFV  +L+++Y   G  R+A  +F  +  +DV   N M+  Y + 
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE--NLGVEEGKQLHGLAVKFGVVREIS 296
           G  + AF +F     S   P++++   +++ C       +E GKQ+HG+AVK G+  ++S
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V N++V MY K G +  A  +F+ +   +LISW ++IS   +S    +++N F++ L  G
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382

Query: 357 ICCD-----SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
           +  D     S  LAT    C     L+ G Q+H  AIK G+ SD+ + + ++D+Y K GD
Sbjct: 383 LKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD 442

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           + +A ++ +  S      + +++SG ++    +E+  + ++ + R + + PD  TF+ L+
Sbjct: 443 MVNAGIVFNYISAPDDVAWTSMISGCVDN--GNEDQALRIYHRMRQSRVMPDEYTFATLI 500

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
             S+    L +GR LHA  IK    +D  VG +L+ MYAKCG+I+ A+++FK ++ R+I 
Sbjct: 501 KASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA 560

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
            WNAML   A HG  + A+ LF+ MK  G  PD +S +G+L AC ++GL+       + +
Sbjct: 561 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 620

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
              YG+ P +EH++C+VD LGRAG + EA  +I + PF  S  + R L+   ++  + + 
Sbjct: 621 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVET 680

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
               + RL  LEP D+ +++L+SN+YA     D+    R  M    + K+ G SWI++ +
Sbjct: 681 GKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKN 740

Query: 712 KLHHFVASGKDHPESEEIYSKLD 734
            LH FV   + HP+++ IY K++
Sbjct: 741 MLHLFVVDDRSHPQADIIYDKVE 763


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/669 (32%), Positives = 357/669 (53%), Gaps = 3/669 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF-DGMLVRSAITWTSLI 131
           D +LG  VHA  + +G  +D F AN L+ +Y  F  +D A+++F +    R+A++W  L+
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y+ +      + +  +M  S  +  E   S ++ AC+   +   G Q+HA  ++ G++
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VF   +L+ MY   G    A  +F  +   DV   N +I      G    A  + + +
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             S   PN +T ++++  C      + G+Q+HG  +K     +  +G  +V MY K+   
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A ++FD +  R+LI   ALISG    G   +A++ F E    G+  + + LA V+   
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +         Q+H  A+K G++ D  +   L+D Y K   L  A  + +  S        
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           ++++   +   D  E  + LF +    G+EPDP   S LL+  AS +   +G+ +HA+ I
Sbjct: 475 SMITALSQ--CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K  + +D   GNAL+  YAKCGSI+ A   F  + +R +VSW+AM+   A HG GK AL 
Sbjct: 533 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 592

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF  M  EG  P+ I++  VL AC ++GL +     FN +++++G+    EH++CM+DLL
Sbjct: 593 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLL 652

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAG+L +AM L+NS PF  +  +W  L+  S++  + +   LA+++L  LEP+ +G+ +
Sbjct: 653 GRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHV 712

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L++N YA  GM +E AKVR  M D  + KE   SWIE+  K+H F+   K HP ++EIY+
Sbjct: 713 LLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYA 772

Query: 732 KLDLLNDEM 740
           KL  L D M
Sbjct: 773 KLVELGDLM 781



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 160/500 (32%), Positives = 263/500 (52%), Gaps = 8/500 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +HA LLKSGS   +F  N+LI+ Y+K  R   A+++FD +     ++W+SL+  Y +
Sbjct: 23  GAHLHASLLKSGSLA-SFR-NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G   S +     M       NE    V+L+    + D   G Q+HA A+ +GF ++VFV
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFV 137

Query: 197 GTSLISMYFHSGCFREAENVF-RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
             +L++MY   G   +A  VF    + ++    N ++  Y K  +   A  VF  ++ S 
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P ++ F+ V++ C  +  +E G+Q+H + V+ G  +++   NA+V MY K G  + A 
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F+ + + +++SW ALISG V +GH  +AI   L+    G+  +   L++++  CS   
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
             +LG Q+HGF IK    SD  +G  LVD+YAK   L  AR + D    +     NA++S
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G       DE   + LF + R  G+  +  T + +L  +AS       R +HA ++K G+
Sbjct: 378 GCSHGGRHDE--ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGF 435

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             D  V N LI  Y KC  +  A ++F+  S  DI++  +M++A +    G+GA+ LF E
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495

Query: 556 MKREGFAPDDISILGVLQAC 575
           M R+G  PD   +  +L AC
Sbjct: 496 MLRKGLEPDPFVLSSLLNAC 515



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 231/483 (47%), Gaps = 6/483 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +V    GS +++ G+ VHA +++ G   D F AN L+++Y K  R+D+A  +F+ M    
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W +LI G + +G     + +   M  S    N  T S IL+ACS       G QIH 
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           F IK+  +++ ++G  L+ MY  +    +A  VF  + ++D+   N +I   +  G  + 
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  L       N  T   V+            +Q+H LAVK G + +  V N ++ 
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K     +A R+F+  S  ++I+ T++I+   +  HG  AI  F+E L  G+  D   
Sbjct: 448 SYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 507

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L+++++ C+  S  E G Q+H   IK  ++SD   G ALV  YAK G ++ A +      
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 567

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    ++A++ G  +      +  + LF +    G+ P+ +T + +L  + + A LV  
Sbjct: 568 ERGVVSWSAMIGGLAQH--GHGKRALELFGRMVDEGINPNHITMTSVLC-ACNHAGLVDE 624

Query: 484 RSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAY 540
              +  S+K  +  D    +   +I +  + G +D A ++   +  +   S W A+L A 
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGAS 684

Query: 541 ALH 543
            +H
Sbjct: 685 RVH 687



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 159/320 (49%), Gaps = 15/320 (4%)

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G  LH   +K G +   S  N +++ Y K      A R+FD I +   +SW++L++ Y  
Sbjct: 23  GAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G    AI  F      G+CC+   L  V+       +  LG Q+H  A+  G+ SDV +
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVL---KCVPDARLGAQVHAMAMATGFGSDVFV 137

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTA-EFNAILSGFMEKIADDEEDVMVLFSQQRL 457
             ALV +Y   G +  AR + +    +  A  +N ++S +++   D   D + +F +   
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN--DQCGDAIQVFGEMVW 195

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G++P    FS +++       +  GR +HA  ++ GY  DV   NAL+ MY K G +D 
Sbjct: 196 SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDI 255

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  IF+ + D D+VSWNA++S   L+G    A+ L  +MK  G  P+  ++  +L+AC  
Sbjct: 256 ASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSG 315

Query: 578 SGLSEGGICLFNEIEQIYGL 597
           +G        F+   QI+G 
Sbjct: 316 AG-------AFDLGRQIHGF 328



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 2/108 (1%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T S+ L+  A+   L+ G  LHA  +K+G  A     N LI+ Y+KC     A ++F  I
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSGSLASF--RNHLISFYSKCRRPCCARRVFDEI 63

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            D   VSW+++++AY+ +GL + A+  F  M+ EG   ++ ++  VL+
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK 111


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/669 (32%), Positives = 357/669 (53%), Gaps = 3/669 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF-DGMLVRSAITWTSLI 131
           D +LG  VHA  + +G  +D F AN L+ +Y  F  +D A+++F +    R+A++W  L+
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y+ +      + +  +M  S  +  E   S ++ AC+   +   G Q+HA  ++ G++
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VF   +L+ MY   G    A  +F  +   DV   N +I      G    A  + + +
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             S   PN +T ++++  C      + G+Q+HG  +K     +  +G  +V MY K+   
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A ++FD +  R+LI   ALISG    G   +A++ F E    G+  + + LA V+   
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +         Q+H  A+K G++ D  +   L+D Y K   L  A  + +  S        
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           ++++   +   D  E  + LF +    G+EPDP   S LL+  AS +   +G+ +HA+ I
Sbjct: 475 SMITALSQ--CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K  + +D   GNAL+  YAKCGSI+ A   F  + +R +VSW+AM+   A HG GK AL 
Sbjct: 533 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 592

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF  M  EG  P+ I++  VL AC ++GL +     FN +++++G+    EH++CM+DLL
Sbjct: 593 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLL 652

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAG+L +AM L+NS PF  +  +W  L+  S++  + +   LA+++L  LEP+ +G+ +
Sbjct: 653 GRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHV 712

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L++N YA  GM +E AKVR  M D  + KE   SWIE+  K+H F+   K HP ++EIY+
Sbjct: 713 LLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYA 772

Query: 732 KLDLLNDEM 740
           KL  L D M
Sbjct: 773 KLVELGDLM 781



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 160/500 (32%), Positives = 262/500 (52%), Gaps = 8/500 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +HA LLKSGS   +F  N+LI+ Y+K  R   A++ FD +     ++W+SL+  Y +
Sbjct: 23  GAHLHASLLKSGSLA-SFR-NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G   S +     M       NE    V+L+    + D   G Q+HA A+ +GF ++VFV
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFV 137

Query: 197 GTSLISMYFHSGCFREAENVF-RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
             +L++MY   G   +A  VF    + ++    N ++  Y K  +   A  VF  ++ S 
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P ++ F+ V++ C  +  +E G+Q+H + V+ G  +++   NA+V MY K G  + A 
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F+ + + +++SW ALISG V +GH  +AI   L+    G+  +   L++++  CS   
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
             +LG Q+HGF IK    SD  +G  LVD+YAK   L  AR + D    +     NA++S
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G       DE   + LF + R  G+  +  T + +L  +AS       R +HA ++K G+
Sbjct: 378 GCSHGGRHDE--ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGF 435

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             D  V N LI  Y KC  +  A ++F+  S  DI++  +M++A +    G+GA+ LF E
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495

Query: 556 MKREGFAPDDISILGVLQAC 575
           M R+G  PD   +  +L AC
Sbjct: 496 MLRKGLEPDPFVLSSLLNAC 515



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 231/483 (47%), Gaps = 6/483 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +V    GS +++ G+ VHA +++ G   D F AN L+++Y K  R+D+A  +F+ M    
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W +LI G + +G     + +   M  S    N  T S IL+ACS       G QIH 
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           F IK+  +++ ++G  L+ MY  +    +A  VF  + ++D+   N +I   +  G  + 
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  L       N  T   V+            +Q+H LAVK G + +  V N ++ 
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K     +A R+F+  S  ++I+ T++I+   +  HG  AI  F+E L  G+  D   
Sbjct: 448 SYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 507

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L+++++ C+  S  E G Q+H   IK  ++SD   G ALV  YAK G ++ A +      
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 567

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    ++A++ G  +      +  + LF +    G+ P+ +T + +L  + + A LV  
Sbjct: 568 ERGVVSWSAMIGGLAQH--GHGKRALELFGRMVDEGINPNHITMTSVLC-ACNHAGLVDE 624

Query: 484 RSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAY 540
              +  S+K  +  D    +   +I +  + G +D A ++   +  +   S W A+L A 
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGAS 684

Query: 541 ALH 543
            +H
Sbjct: 685 RVH 687



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 158/320 (49%), Gaps = 15/320 (4%)

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G  LH   +K G +   S  N +++ Y K      A R FD I +   +SW++L++ Y  
Sbjct: 23  GAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G    AI  F      G+CC+   L  V+       +  LG Q+H  A+  G+ SDV +
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVL---KCVPDARLGAQVHAMAMATGFGSDVFV 137

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTA-EFNAILSGFMEKIADDEEDVMVLFSQQRL 457
             ALV +Y   G +  AR + +    +  A  +N ++S +++   D   D + +F +   
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN--DQCGDAIQVFGEMVW 195

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G++P    FS +++       +  GR +HA  ++ GY  DV   NAL+ MY K G +D 
Sbjct: 196 SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDI 255

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  IF+ + D D+VSWNA++S   L+G    A+ L  +MK  G  P+  ++  +L+AC  
Sbjct: 256 ASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSG 315

Query: 578 SGLSEGGICLFNEIEQIYGL 597
           +G        F+   QI+G 
Sbjct: 316 AG-------AFDLGRQIHGF 328



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 2/108 (1%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T S+ L+  A+   L+ G  LHA  +K+G  A     N LI+ Y+KC     A + F  I
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSGSLASF--RNHLISFYSKCRRPCCARRFFDEI 63

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            D   VSW+++++AY+ +GL + A+  F  M+ EG   ++ ++  VL+
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK 111


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/672 (31%), Positives = 366/672 (54%), Gaps = 6/672 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K   G  DL LGQ +H    K    +D F  N LI +Y K   ++ A K+F+ M  
Sbjct: 105 PCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPE 164

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFGE 179
           R+ ++W S+I G+ ++G  +       +M   EE F  +  T   +L  C+  ED   G 
Sbjct: 165 RNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGM 224

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            +H  A+K G    + V  SLI MY       EA+ +F     K++   N MI  Y +  
Sbjct: 225 AVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREE 284

Query: 240 ESEMAFHVFVHLLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           +    F++   + + D   + +++T  NV+ VC E   ++  K+LHG + + G+     V
Sbjct: 285 DVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELV 344

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA +  Y + G    +ER+FD +  + + SW AL+ GY ++    KA++ +L+  D G+
Sbjct: 345 ANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGL 404

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   + +++  CS   +L  G ++HGFA+++G   D  +G +L+ +Y   G   +A++
Sbjct: 405 DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQV 464

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L DG   +    +N +++G+ +    DE   + LF Q    G++P  +    +    +  
Sbjct: 465 LFDGMEHRSLVSWNVMIAGYSQNGLPDE--AINLFRQMLSDGIQPYEIAIMCVCGACSQL 522

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           + L  G+ LH +++K     D+ V +++I MYAK G I  + +IF  + ++D+ SWN ++
Sbjct: 523 SALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVII 582

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y +HG GK AL LFE+M R G  PDD +  G+L AC ++GL E G+  FN++  ++ +
Sbjct: 583 AGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNI 642

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P LEH+ C+VD+LGRAGR+ +A+ LI   P      +W +L+S  ++  N       + 
Sbjct: 643 EPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVAN 702

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +LL+LEP+   +++L+SN++AG G  D+  +VR  M D+ L K+AGCSWIE+  K+H+F+
Sbjct: 703 KLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFL 762

Query: 718 ASGKDHPESEEI 729
              +  PE EE+
Sbjct: 763 IGDEMLPELEEV 774



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 260/509 (51%), Gaps = 8/509 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANN-LINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           D+++G+ +H  +  S    + F  N  +I +Y+       ++ +FD +  ++   W +++
Sbjct: 13  DIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIV 72

Query: 132 KGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
             Y  +  +E  + I  ++   +E K +  T   +++AC+ L D   G+ IH  A K   
Sbjct: 73  SAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDL 132

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            ++VFVG +LI+MY   G   EA  VF  +  +++   N +I  +++ G  + +F+ F  
Sbjct: 133 VSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFRE 192

Query: 251 LLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +L  +  F P+  T   V+ VC     +E+G  +HGLAVK G+  E+ V N+++ MY K 
Sbjct: 193 MLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKC 252

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEFLDLGICCDSSCLAT 366
               EA+ +FD   ++N++SW ++I GY R     +       ++  D  +  D   +  
Sbjct: 253 RFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILN 312

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+  C   S L+   +LHG++ +HG  S+  +  A +  Y + G L S+  + D    K 
Sbjct: 313 VLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKT 372

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
            + +NA+L G+ +    D    + L+ Q   +G++PD  T   LL   +    L  G  +
Sbjct: 373 VSSWNALLCGYAQN--SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEI 430

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H ++++ G A D  +G +L+++Y  CG    A  +F G+  R +VSWN M++ Y+ +GL 
Sbjct: 431 HGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLP 490

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQAC 575
             A+ LF +M  +G  P +I+I+ V  AC
Sbjct: 491 DEAINLFRQMLSDGIQPYEIAIMCVCGAC 519



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 225/421 (53%), Gaps = 14/421 (3%)

Query: 164 VILEACSLLEDRIFGEQIHAF-AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           V+L+AC   +D   G ++H   +  + F N+  + T +I+MY   G   ++  VF  L  
Sbjct: 3   VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQ 281
           K++   N ++  Y +    E A  +F  L+S ++ +P+++T   VI  C   L +  G+ 
Sbjct: 63  KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HG+A K  +V ++ VGNA++ MYGK G+ EEA ++F+ + ERNL+SW ++I G+  +G 
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182

Query: 342 GGKAINGFLEFL--DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
             ++ N F E L  +     D + L TV+  C+   ++E G+ +HG A+K G   ++ + 
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF-----SQ 454
            +L+D+Y+K   L  A++L D    K    +N+++ G+       EEDV   F      Q
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAR-----EEDVCRTFYLLQKMQ 297

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
              A M+ D  T   +L +   ++ L   + LH YS + G  ++ +V NA I  Y +CG+
Sbjct: 298 TEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGA 357

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +  + ++F  +  + + SWNA+L  YA +   + AL L+ +M   G  PD  +I  +L A
Sbjct: 358 LCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLA 417

Query: 575 C 575
           C
Sbjct: 418 C 418


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/673 (34%), Positives = 363/673 (53%), Gaps = 5/673 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+  + VH+  + +G   D    N L+++YAK   +D A+ +FDGM+ R   +WT +
Sbjct: 144 AGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVM 203

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI--FGEQIHAFAIKS 188
           I G    G  +    +   M R     N  T   IL A ++       + +++H  A K+
Sbjct: 204 IGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKA 263

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF +++ VG +LI MY   G   +A  VF G+  +DV   N MI    + G    AF +F
Sbjct: 264 GFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIF 323

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           + +    F P+  T+ ++++        E  K++H  AV+ G+V ++ VG+A V MY + 
Sbjct: 324 LKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRC 383

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  ++A+ +FD ++ RN+ +W A+I G  +   G +A++ FL+    G   D++    ++
Sbjct: 384 GSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNIL 443

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
                   LE   ++H +AI  G L D+R+G ALV +YAK G+   A+ + D    +   
Sbjct: 444 SANVGEEALEWVKEVHSYAIDAG-LVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVT 502

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +  ++SG  +     E     LF Q    G+ PD  T+  +LS  AS   L   + +H+
Sbjct: 503 TWTVMISGLAQHGCGHE--AFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHS 560

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           +++  G  +D+ VGNAL+ MYAKCGS+D A ++F  + +RD+ SW  M+   A HG G  
Sbjct: 561 HAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLD 620

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF +MK EGF P+  S + VL AC ++GL + G   F  + Q YG+ P +EH+ CMV
Sbjct: 621 ALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMV 680

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGRAG+L EA + I + P       W  L+       N + +  A+K  L L+PK A 
Sbjct: 681 DLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSAS 740

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++L+SN+YA  G  ++   VR+ M    + KE G SWIE+D+++H FV     HPES+E
Sbjct: 741 TYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKE 800

Query: 729 IYSKLDLLNDEMK 741
           IY+KL  L   +K
Sbjct: 801 IYAKLKDLIKRLK 813



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 271/511 (53%), Gaps = 5/511 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK G+ +HA +++SG Q+D      L+N+Y K   +D AQ +FD M+ R+ I+WT +I G
Sbjct: 46  LKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGG 105

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               G  +        M R     N +T   IL A +      + +++H+ A+ +G   +
Sbjct: 106 LAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALD 165

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + VG +L+ MY  SG   +A  VF G+  +D+     MI    + G  + AF +F+ +  
Sbjct: 166 LRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMER 225

Query: 254 SDFEPNDYTFTNVI--SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
               PN  T+ +++  S       +E  K++H  A K G + ++ VGNA++ MY K G  
Sbjct: 226 GGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSI 285

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A  +FD + +R++ISW A+I G  ++G G +A   FL+    G   DS+   ++++  
Sbjct: 286 DDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTH 345

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
                 E   ++H  A++ G +SD+R+G+A V +Y + G +  A+++ D  + +    +N
Sbjct: 346 VSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWN 405

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A++ G  ++    E   + LF Q R  G  PD  TF  +LS +  +  L   + +H+Y+I
Sbjct: 406 AMIGGVAQQKCGRE--ALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAI 463

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
             G   D+ VGNAL+ MYAKCG+   A Q+F  + +R++ +W  M+S  A HG G  A  
Sbjct: 464 DAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFS 522

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           LF +M REG  PD  + + +L AC  +G  E
Sbjct: 523 LFLQMLREGIVPDATTYVSILSACASTGALE 553



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/449 (32%), Positives = 245/449 (54%), Gaps = 4/449 (0%)

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I GY + G  E  + +   M R   + NE T   IL+AC       +G++IHA  I+SG
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F+++V V T+L++MY   G   +A+ +F  +  ++V     MI      G  + AFH F+
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +    F PN YT+ ++++       +E  K++H  AV  G+  ++ VGNA+V MY K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             ++A  +FD + ER++ SWT +I G  + G G +A + FL+    G   + +   ++++
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 370 GCSVCSN--LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
             ++ S   LE   ++H  A K G++SD+R+G AL+ +YAK G +  AR++ DG   +  
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +NA++ G  +     E   + L  QQ   G  PD  T+  LL+   S       + +H
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQE--GFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            ++++ G  +D+ VG+A + MY +CGSID A  IF  ++ R++ +WNAM+   A    G+
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACI 576
            AL LF +M+REGF PD  + + +L A +
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSANV 447



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 82/137 (59%)

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
           ED M ++SQ R  G +P+ +T+  +L    S   L  G+ +HA+ I++G+ +DV V  AL
Sbjct: 12  EDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETAL 71

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           + MY KCGSID A  IF  + +R+++SW  M+   A +G G+ A   F +M+REGF P+ 
Sbjct: 72  VNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNS 131

Query: 566 ISILGVLQACIYSGLSE 582
            + + +L A   +G  E
Sbjct: 132 YTYVSILNANASAGALE 148


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/680 (32%), Positives = 373/680 (54%), Gaps = 2/680 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +VK     G + LG+ VH     +G  +D +  + LI +Y+    L  A+  FDGM  
Sbjct: 145 PYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPW 204

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  + W  ++ GY+  GD    + +  +M  S  + N  T +  L  C+   D + G Q+
Sbjct: 205 RDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQL 264

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H+ A+K G E  V V  +L+SMY    C  +A  +F  L   D+   N MI    + G  
Sbjct: 265 HSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLL 324

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  +F  +L S   P+  T  +++    +  G+++GK++HG  ++  V  +  + +A+
Sbjct: 325 DEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSAL 384

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V +Y K      A  ++DA    +++  + +ISGYV +G   KA+  F   L+  I  ++
Sbjct: 385 VDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNA 444

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             +A+V+  C+  S L LG ++HG+ +++ Y     + +AL+D+YAK G L  +  +   
Sbjct: 445 VTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSK 504

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            S K    +N+++S F +    + ++ + LF Q  + G++ + VT S  LS  AS   + 
Sbjct: 505 MSLKDEVTWNSMISSFSQN--GEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIY 562

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ +H   IK    AD+   +ALI MYAKCG+++ A ++F+ + D++ VSWN+++SAY 
Sbjct: 563 YGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYG 622

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HGL K ++     M+ EG+ PD ++ L ++ AC ++GL E G+ LF  + + Y + P +
Sbjct: 623 AHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRM 682

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           EHFACMVDL  R+GRL +A+  I   PF     +W  L+   ++  N + + +AS+ L  
Sbjct: 683 EHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFK 742

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           L+P ++G ++L+SN+ A  G  D  +KVR  M D ++ K  G SW+++++  H FVAS K
Sbjct: 743 LDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDK 802

Query: 722 DHPESEEIYSKLDLLNDEMK 741
            HPESE+IY+ L  L  E++
Sbjct: 803 SHPESEDIYTSLKALLQELR 822



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 182/665 (27%), Positives = 333/665 (50%), Gaps = 33/665 (4%)

Query: 46  ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGS---QNDTFEANNLINL 102
           ++ VS ++R L       L++  + +  L LG  +HA  + SG+    N       L+ +
Sbjct: 26  VTDVSSADRLL------ALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGM 79

Query: 103 YAKFNRLDVAQKLFDGM---LVRSAITWTSLIKGYLDDGDYESVLGIACDMYR--SEEKF 157
           Y    R   A  +F  +      S++ W  LI+G+   G +   +     M+   +    
Sbjct: 80  YVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSP 139

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           + HT   ++++C+ L     G  +H  A  +G  ++V+VG++LI MY  +G  R+A + F
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAF 199

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
            G+ ++D    N M+  Y KAG+   A  +F ++  S  EPN  T    +SVC     + 
Sbjct: 200 DGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLL 259

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
            G QLH LAVK G+ +E++V N +++MY K    ++A R+F+ +   +L++W  +ISG V
Sbjct: 260 SGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCV 319

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           ++G   +A+  F + L  G   DS  L +++   +  + L+ G ++HG+ I++    D  
Sbjct: 320 QNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAF 379

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           L +ALVDIY K  D+++AR L D          + ++SG++  +    E  + +F     
Sbjct: 380 LVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYV--LNGMSEKALQMFRYLLE 437

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
             ++P+ VT + +L   AS + L  G+ +H Y ++  Y     V +AL+ MYAKCG +D 
Sbjct: 438 QCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDL 497

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-- 575
           +  IF  +S +D V+WN+M+S+++ +G  + AL LF +M  EG   ++++I   L AC  
Sbjct: 498 SHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACAS 557

Query: 576 ---IYSGLSEGGICLFNEIEQIYGLRPILEHFA--CMVDLLGRAGRLSEAMNLINSSPFS 630
              IY G    G+ +   I+         + FA   ++D+  + G +  A+ +    P  
Sbjct: 558 LPAIYYGKEIHGVIIKGPIKA--------DIFAESALIDMYAKCGNMELALRVFEFMP-D 608

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK-DAGSFILVSNMYAGQGMLDEAAKV 689
           ++ + W +++S        K S+    R+ +   K D  +F+ + +  A  G+++E  ++
Sbjct: 609 KNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQL 668

Query: 690 RTTMN 694
              M 
Sbjct: 669 FQCMT 673


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 224/690 (32%), Positives = 368/690 (53%), Gaps = 8/690 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F  +P L+K   G  D+  G+ +H  +LK G  +D    N+L+ +Y K   ++ A ++F+
Sbjct: 109 FRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFE 168

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRI 176
            M     ++W ++I G+    DY   L     M      + N   C   + +CS L+   
Sbjct: 169 KMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLT 228

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD-VR----CVNFM 231
            G +IH   +KSG +   ++ +SLI MY   G  + AEN+F  +  KD VR      N M
Sbjct: 229 HGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVM 288

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           I  Y   G    A  +F+ ++    +P+  T  ++ S+C E+L +  GKQ+HGL  KFG+
Sbjct: 289 ISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGL 348

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
              I V  A++ MY K G      ++F      NLI W+A+IS   +SG   KA+  F E
Sbjct: 349 KNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYE 408

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
           F       DS  L  V+  CS  +    G+Q+HG A K G++SDV +G+ALVD+YAK  D
Sbjct: 409 FKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRD 468

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           +  ++ +    S K    +NA++SG+ +    DE   +  F   +L  + P+ VT + +L
Sbjct: 469 MGYSKKVFLRLSQKDLVSWNALISGYAQDECADE--ALKAFRDMQLEEIRPNTVTIACIL 526

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           S+ A  + +   + +H Y I+ G  + V+V N+LI  YAKCG I+ +   F+ + +R+ V
Sbjct: 527 SVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDV 586

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           SWN+++    +H      ++LF++M   G  PD ++   +L AC ++G  + G   F  +
Sbjct: 587 SWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSM 646

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
            + + L+P LE + CMVDLLGRAG L++A +LI + P +    +W +L+   K   +   
Sbjct: 647 VEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEIL 706

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
           + + +  +  L P   G  +L++N+Y   G   E +KVR+ + D+ L K+ GCSWIE+D+
Sbjct: 707 AEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDN 766

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             H F+A  + H +S+EIY+ ++ L  E+K
Sbjct: 767 NFHIFIAGDRSHSQSDEIYAAVESLTTEIK 796



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 228/459 (49%), Gaps = 13/459 (2%)

Query: 128 TSLIKGYLDDGDYESVLGIACDMYR---SEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
            ++I+ Y +DG ++  +G+   M       E+F    C  +++A   L D   G QIH  
Sbjct: 77  NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPC--LIKAFGGLCDVYKGRQIHGH 134

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +K G  ++V V  SL++MY+  G   +A  +F  +   D+   N MI  + K+ +   +
Sbjct: 135 VLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRS 194

Query: 245 FHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              F  ++      PN     + I  C     +  G+++HG+ VK G+  E  + ++++ 
Sbjct: 195 LMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIE 254

Query: 304 MYGKHGMSEEAERMFDAISE-----RNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           MY K G  + AE +F++I +     RN + W  +ISGYV +G   +A+  F++ +  GI 
Sbjct: 255 MYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIK 314

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D S + ++   CS   ++  G Q+HG   K G  +++R+ TAL+D+Y K GD+ +   +
Sbjct: 315 PDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKI 374

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                      ++A++S   +  +      + LF + ++     D      +L   +S  
Sbjct: 375 FRRSQNHNLIMWSAVISNCAQ--SGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLT 432

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
               G  +H  + K G+ +DV VG+AL+ +YAKC  +  + ++F  +S +D+VSWNA++S
Sbjct: 433 LKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALIS 492

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
            YA       AL  F +M+ E   P+ ++I  +L  C +
Sbjct: 493 GYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAH 531


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 224/680 (32%), Positives = 369/680 (54%), Gaps = 12/680 (1%)

Query: 64  LVKISIGSG-DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           L +++ GS  +  LG+ +H  ++  G QN+     +LINLY   +    A+ +F  +   
Sbjct: 200 LARVTAGSALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 259

Query: 123 SAIT-WTSLI----KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
             IT W  L+    K ++     E    +    Y   + F   T   +L+ACS L    +
Sbjct: 260 LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAF---TYPSVLKACSGLGRVGY 316

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+ +H   IKSGF  +V V +S + MY     F +A  +F  +  +DV   N +I  Y +
Sbjct: 317 GKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQ 376

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G+ E A  +F  +  S F+P+  T T VIS C   L +E GK++H   V+ G   +  V
Sbjct: 377 DGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFV 436

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            +A+V MYGK G  E A+ +F+ I  +N++SW ++I+GY   G     I  F    + GI
Sbjct: 437 SSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGI 496

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
               + L++++  CS   NL+LG  +HG+ I++   +D+ + ++L+D+Y K G++ SA  
Sbjct: 497 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAEN 556

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +           +N ++SG+++       + +V+F+  R AG++PD +TF+ +L   +  
Sbjct: 557 VFQNMPKTNVVSWNVMISGYVK--VGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 614

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L +G+ +H + I++    + +V  AL+ MYAKCG++D A  IF  + +RD VSW +M+
Sbjct: 615 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMI 674

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +AY  HG    AL LFE+M++    PD ++ L +L AC ++GL + G   FN++   YG 
Sbjct: 675 AAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGF 734

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSP-FSESPLLWRTLVSVSKLMANSKFSILAS 656
           +P +EH++C++DLLGR GRL EA  ++  +P   E   L  TL S   L           
Sbjct: 735 KPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIG 794

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           + L++ +P D  ++I++SNMYA     DE  KVR  + +L L K  GCSWIE+  ++H F
Sbjct: 795 RLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPF 854

Query: 717 VASGKDHPESEEIYSKLDLL 736
           V   K HP+++ IY  + +L
Sbjct: 855 VVEDKSHPQADMIYECMSIL 874



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 260/522 (49%), Gaps = 21/522 (4%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G G +  G+ VH  ++KSG   D    ++ + +YAK N  + A KLFD M 
Sbjct: 301 YPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP 360

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R   +W ++I  Y  DG  E  L +  +M  S  K +  T + ++ +C+ L D   G++
Sbjct: 361 ERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKE 420

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   ++SGF  + FV ++L+ MY   GC   A+ VF  +  K+V   N MI  Y+  G+
Sbjct: 421 IHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD 480

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           S+    +F  +      P   T ++++  C  ++ ++ GK +HG  ++  V  +I V ++
Sbjct: 481 SKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSS 540

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G    AE +F  + + N++SW  +ISGYV+ G   +A+  F +    G+  D
Sbjct: 541 LIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPD 600

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLL 419
           +    +V+  CS  + LE G ++H F I+    +++V +G AL+D+YAK G +  A  + 
Sbjct: 601 AITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG-ALLDMYAKCGAVDEALHIF 659

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    +    + ++++ +         + + LF + + +  +PD VTF  +LS + S A 
Sbjct: 660 NQLPERDFVSWTSMIAAYGSH--GQAFEALKLFEKMQQSDAKPDKVTFLAILS-ACSHAG 716

Query: 480 LVRGRSLHAYSI--KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD--RDIVSWNA 535
           LV     +   +  + G+   V   + LI +  + G +  A++I +   D   D+   + 
Sbjct: 717 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLST 776

Query: 536 MLSAYALH-----GLGKGALLLFEEMKREGFAPDDISILGVL 572
           + SA  LH     G   G LL+ ++       PDD S   +L
Sbjct: 777 LFSACHLHKKLDLGEQIGRLLIEKD-------PDDPSTYIIL 811


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 236/707 (33%), Positives = 371/707 (52%), Gaps = 12/707 (1%)

Query: 54  RTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQ 113
           R  + N++  L++  I S  L   + +H   LK+ S  D+   + L  LY   N++ +A+
Sbjct: 4   RXEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLAR 63

Query: 114 KLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
           +LFD +   S I W  +I+ Y  +G ++  + +   M     + N++T   +L+ACS L 
Sbjct: 64  RLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLL 123

Query: 174 DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
               G +IH+ A   G E++VFV T+L+  Y   G   EA+ +F  ++++DV   N MI 
Sbjct: 124 AIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
             +  G  + A  + + +      PN  T   V+    E   +  GK LHG  V+     
Sbjct: 184 GCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDN 243

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
            + VG  ++ MY K      A ++FD +  RN +SW+A+I GYV S    +A    LE  
Sbjct: 244 GVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEA----LELF 299

Query: 354 DLGICCDS-----SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           D  I  D+       L +V+  C+  ++L  G +LH + IK G + D+ LG  L+ +YAK
Sbjct: 300 DQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAK 359

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G +  A    D  + K +  F+AI+SG ++    +    + +F   +L+G++PD  T  
Sbjct: 360 CGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQN--GNAAVALSIFRMMQLSGIDPDLTTML 417

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L   +  A L  G   H Y I  G+A D ++ NALI MY+KCG I  A ++F  +   
Sbjct: 418 GVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH 477

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           DIVSWNAM+  Y +HGLG  AL LF ++   G  PDDI+ + +L +C +SGL   G   F
Sbjct: 478 DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWF 537

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
           + + + + + P +EH  CMVD+LGRAG + EA + I + PF     +W  L+S  ++  N
Sbjct: 538 DAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 597

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            +     SK++  L P+  G+F+L+SN+Y+  G  D+AA +R T  D  L K  GCSWIE
Sbjct: 598 IELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIE 657

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
           I+  +H FV   + H +  +I  KL+ L  EMK L  +   +F  QD
Sbjct: 658 INGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQD 704


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 235/702 (33%), Positives = 369/702 (52%), Gaps = 12/702 (1%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           N++  L++  I S  L   + +H   LK+ S  D+   + L  LY   N++ +A++LFD 
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           +   S I W  +I+ Y  +G ++  + +   M     + N++T   +L+ACS L     G
Sbjct: 69  IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            +IH+ A   G E++VFV T+L+  Y   G   EA+ +F  ++++DV   N MI   +  
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G  + A  + + +      PN  T   V+    E   +  GK LHG  V+      + VG
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
             ++ MY K      A ++FD +  RN +SW+A+I GYV S    +A    LE  D  I 
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEA----LELFDQMIL 304

Query: 359 CDS-----SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
            D+       L +V+  C+  ++L  G +LH + IK G + D+ LG  L+ +YAK G + 
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVID 364

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            A    D  + K +  F+AI+SG ++    +    + +F   +L+G++PD  T   +L  
Sbjct: 365 DAIRFFDEMNPKDSVSFSAIVSGCVQN--GNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +  A L  G   H Y I  G+A D ++ NALI MY+KCG I  A ++F  +   DIVSW
Sbjct: 423 CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSW 482

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           NAM+  Y +HGLG  AL LF ++   G  PDDI+ + +L +C +SGL   G   F+ + +
Sbjct: 483 NAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSR 542

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            + + P +EH  CMVD+LGRAG + EA + I + PF     +W  L+S  ++  N +   
Sbjct: 543 DFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGE 602

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
             SK++  L P+  G+F+L+SN+Y+  G  D+AA +R T  D  L K  GCSWIEI+  +
Sbjct: 603 EVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIV 662

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
           H FV   + H +  +I  KL+ L  EMK L  +   +F  QD
Sbjct: 663 HAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQD 704


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/682 (33%), Positives = 369/682 (54%), Gaps = 7/682 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++  + S  LK G+ +H  ++  G QND F   NLINLY   +  D A+ +FD M    
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68

Query: 124 AIT-WTSLIKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
            I+ W  L+ GY  +  Y   L +   + +    K + +T   +L+AC  L   + G+ I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   +K+G   ++ VG+SL+ MY     F +A  +F  +  KDV C N +I  Y ++G  
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A   F  +    FEPN  T T  IS C   L +  G ++H   +  G + +  + +A+
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V MYGK G  E A  +F+ + ++ +++W ++ISGY   G     I  F    + G+    
Sbjct: 249 VDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTL 308

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           + L+++I  CS  + L  G  +HG+ I++   SDV + ++L+D+Y K G ++ A  +   
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKL 368

Query: 422 FSCKYTAEFNAILSGFMEKIADDEE-DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                   +N ++SG+   +A+ +  + + LFS+ R + +EPD +TF+ +L+  +  A L
Sbjct: 369 IPKSKVVSWNVMISGY---VAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAAL 425

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            +G  +H   I+     + +V  AL+ MYAKCG++D AF +FK +  RD+VSW +M++AY
Sbjct: 426 EKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG    AL LF EM +    PD ++ L +L AC ++GL + G   FN++  +YG+ P 
Sbjct: 486 GSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPR 545

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSP-FSESPLLWRTLVSVSKLMANSKFSILASKRL 659
           +EH++C++DLLGRAGRL EA  ++  +P   +   L  TL S  +L  N       ++ L
Sbjct: 546 VEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTL 605

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           +D +P D+ ++IL+SNMYA     DE   VR+ M +L L K  GCSWIEI+ K+  F   
Sbjct: 606 IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVE 665

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
              H   E ++  L  L+D M+
Sbjct: 666 DNSHLHLELVFKCLSYLSDHME 687



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 229/491 (46%), Gaps = 15/491 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G     LG+ +H  L+K+G   D    ++L+ +YAK N  + A  LF+ M 
Sbjct: 109 YPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMP 168

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +    W ++I  Y   G+++  L     M R   + N  T +  + +C+ L D   G +
Sbjct: 169 EKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGME 228

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   I SGF  + F+ ++L+ MY   G    A  VF  +  K V   N MI  Y   G+
Sbjct: 229 IHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGD 288

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           S     +F  + +   +P   T +++I VC  +  + EGK +HG  ++  +  ++ + ++
Sbjct: 289 SISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSS 348

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G  E AE +F  I +  ++SW  +ISGYV  G   +A+  F E     +  D
Sbjct: 349 LMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPD 408

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +    +V+  CS  + LE G ++H   I+    ++  +  AL+D+YAK G +  A  +  
Sbjct: 409 AITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFK 468

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS-----A 475
               +    + ++++ +           + LF++   + M+PD VTF  +LS        
Sbjct: 469 CLPKRDLVSWTSMITAYGSH--GQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLV 526

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG---ISDRDIVS 532
            + C    + ++ Y    G    V   + LI +  + G +  A++I +    I D D+  
Sbjct: 527 DEGCYYFNQMVNVY----GIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRD-DVEL 581

Query: 533 WNAMLSAYALH 543
            + + SA  LH
Sbjct: 582 LSTLFSACRLH 592


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/660 (34%), Positives = 350/660 (53%), Gaps = 22/660 (3%)

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF----NEHTCS 163
           +L +A+++FD +    A  + +LI+ Y   G + +    A D+YRS   F    N++T  
Sbjct: 48  QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHA----AIDLYRSMLYFRVPPNKYTFP 103

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
            +L+ACS L D   G  IHA A   G   ++FV T+LI +Y     F  A NVF  +  +
Sbjct: 104 FVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR 163

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSD----FEPNDYTFTNVISVCYENLGVEEG 279
           DV   N M+  Y   G   M  H   HLL         PN  T  +++ +  ++  + +G
Sbjct: 164 DVVAWNAMLAGYANHG---MYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQG 220

Query: 280 KQLHGLAVKFGVVR---EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
             +H   ++  + +   ++ +G A++ MY K      A R+F  ++ RN ++W+ALI G+
Sbjct: 221 TSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGF 280

Query: 337 VRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           V      +A N F + L  G+C   ++ +A+ +  C+  ++L +G QLH    K G  +D
Sbjct: 281 VLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHAD 340

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           +  G +L+ +YAK G +  A ML D  + K T  + A+LSG+++      E+  ++F + 
Sbjct: 341 LTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQN--GKAEEAFLVFKKM 398

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           +   ++PD  T   L+   +  A L  GR  H   I  G A +  + N+LI MYAKCG I
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRI 458

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           D + Q+F  +  RDIVSWN M++ Y +HGLGK A  LF  MK +GF PDD++ + ++ AC
Sbjct: 459 DLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAAC 518

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            +SGL   G   F+ +   YG+ P +EH+ CMVDLL R G L EA   I S P      +
Sbjct: 519 SHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRV 578

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W  L+   ++  N       S+ +  L P+  G+F+L+SN+++  G  DEAA+VR     
Sbjct: 579 WGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKV 638

Query: 696 LRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD-LLNDEMKLKVKDSSAFELQD 754
               K  GCSWIEI+  LH FV   + HP S +IY +LD +L D  KL  +  ++F LQD
Sbjct: 639 KGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQD 698



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 240/517 (46%), Gaps = 26/517 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      DL  G+ +HA     G   D F +  LI+LY +  R   A  +F  M 
Sbjct: 102 FPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP 161

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGE 179
           +R  + W +++ GY + G Y   +    DM  R   + N  T   +L   +       G 
Sbjct: 162 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGT 221

Query: 180 QIHAFAIKSGFENN---VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            +HA+ +++  + N   V +GT+L+ MY        A  VF G+  ++    + +I  + 
Sbjct: 222 SVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFV 281

Query: 237 KAGESEMAFHVFVHLLSSDF-EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
                  AF++F  +L       +  +  + + VC     +  G QLH L  K G+  ++
Sbjct: 282 LCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADL 341

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           + GN++++MY K G+  EA  +FD I+ ++ IS+ AL+SGYV++   GKA   FL F  +
Sbjct: 342 TAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQN---GKAEEAFLVFKKM 398

Query: 356 GIC---CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
             C    D + + ++I  CS  + L+ G   HG  I  G   +  +  +L+D+YAK G +
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRI 458

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             +R + D    +    +N +++G+   I    ++   LF   +  G EPD VTF  L++
Sbjct: 459 DLSRQVFDKMPARDIVSWNTMIAGY--GIHGLGKEATTLFLSMKNQGFEPDDVTFICLIA 516

Query: 473 LSASQACLVRGRSL-----HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
             +    +  G+       H Y I       +     ++ + A+ G +D A+Q  + +  
Sbjct: 517 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGFLDEAYQFIQSMPL 572

Query: 528 R-DIVSWNAMLSAYALH---GLGKGALLLFEEMKREG 560
           + D+  W A+L A  +H    LGK    + +++  EG
Sbjct: 573 KADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEG 609


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/688 (32%), Positives = 384/688 (55%), Gaps = 11/688 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G ++ G  +H F+++SG   D +   +LI+ Y+K   ++VA+ +FD +L ++A+TWT++I
Sbjct: 51  GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTII 110

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY   G     L +   M  +    + +  S +L ACS+LE    G+QIHA+ ++ G E
Sbjct: 111 AGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 170

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +V V   LI  Y      +    +F  +  K++     MI  Y +      A  +F  +
Sbjct: 171 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 230

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
               ++P+ +  T+V++ C     +E+G+Q+H   +K  +     V N ++ MY K  + 
Sbjct: 231 NRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLL 290

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +A+++FD ++E+N+IS+ A+I GY       +A+  F E   + +      L T +   
Sbjct: 291 XDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHE---MRVRLFPPSLLTFVSLL 347

Query: 372 SVCSN---LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            V ++   LEL  Q+HG  IK G   D+  G+AL+D+Y+K   +K AR + +  + K   
Sbjct: 348 GVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV 407

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +NA+  G+ + +  + E+ + L+S  + +  +P+  TF+ L++ +++ A L  G+  H 
Sbjct: 408 VWNAMFFGYTQHL--ENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHN 465

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             +K G      V NAL+ MYAKCGSI+ A ++F     RD+V WN+M+S +A HG  + 
Sbjct: 466 QLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEE 525

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL +F EM +EG  P+ ++ + VL AC ++G  E G+  FN +   +G++P  EH+AC+V
Sbjct: 526 ALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVV 584

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
            LLGR+G+L EA   I   P   + ++WR+L+S  ++  N +    A++  +  +PKD+G
Sbjct: 585 SLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSG 644

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           S+IL+SN++A +GM  +  KVR  M+   + KE G SWIE+++K++ F+A    H E++ 
Sbjct: 645 SYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADM 704

Query: 729 IYSKLDLLNDEMKLK--VKDSSAFELQD 754
           I S LD+L   +K    V D++A  + D
Sbjct: 705 IGSVLDILIQHIKGAGYVPDATALLMND 732



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 260/512 (50%), Gaps = 13/512 (2%)

Query: 136 DDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           D+G  E  L +  D+ R S E  NE   + ++ AC+ L     G Q+H F ++SGF+ +V
Sbjct: 13  DEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDV 72

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           +VGTSLI  Y  +G    A  VF  L  K       +I  Y K G S ++  +F  +  +
Sbjct: 73  YVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRET 132

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
           +  P+ Y  ++V+S C     +E GKQ+H   ++ G   ++SV N ++  Y K    +  
Sbjct: 133 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 192

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            ++FD +  +N+ISWT +ISGY+++    +A+  F E   LG   D     +V+  C   
Sbjct: 193 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSL 252

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
             LE G Q+H + IK    S+  +   L+D+YAK   L  A+ + D  + +    +NA++
Sbjct: 253 EALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMI 312

Query: 435 SGF--MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
            G+   EK+++  E    LF + R+    P  +TF  LL +SAS   L   + +H   IK
Sbjct: 313 EGYSSQEKLSEALE----LFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIK 368

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G + D+  G+ALI +Y+KC  +  A  +F+ ++++DIV WNAM   Y  H   + AL L
Sbjct: 369 XGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKL 428

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR--PILEHFACMVDL 610
           +  ++     P++ +   ++ A         G    N++ ++ GL   P + +   +VD+
Sbjct: 429 YSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM-GLDFCPFVTN--ALVDM 485

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
             + G + EA  + NSS + +  + W +++S 
Sbjct: 486 YAKCGSIEEARKMFNSSIWRD-VVCWNSMIST 516



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 71/147 (48%)

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           ME     EE +MV    QR +G  P+    + ++        + +G  LH + +++G+  
Sbjct: 11  MEDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQ 70

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           DV VG +LI  Y+K G I+ A  +F  + ++  V+W  +++ Y   G    +L LF +M+
Sbjct: 71  DVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMR 130

Query: 558 REGFAPDDISILGVLQACIYSGLSEGG 584
                PD   +  VL AC      EGG
Sbjct: 131 ETNVVPDRYVVSSVLSACSMLEFLEGG 157


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/680 (31%), Positives = 375/680 (55%), Gaps = 2/680 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +VK     G + LG+ VH      G  ND +  + L+ +YA    L  A+  FDG+  
Sbjct: 145 PYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPE 204

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  + W  ++ G +  GD +  + +  +M  S  + N  T +  L  C+   D + G Q+
Sbjct: 205 RDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQL 264

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H+ A+K G E  V V  +L++MY    C  +A  +F  +   D+   N MI    + G  
Sbjct: 265 HSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLF 324

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             AF +F  +  S   P+  T  +++    +  G+++GK++HG  V+  V  ++ + +A+
Sbjct: 325 VEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSAL 384

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V +Y K      A+ ++DA    +++  + +ISGYV +G   +A+  F   L+  I  ++
Sbjct: 385 VDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNA 444

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             +A+V+ GC+  + L LG Q+HG+ +++ Y     + +AL+D+YAK G L  +  +   
Sbjct: 445 VTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLK 504

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            S K    +N+++S F +      ++ + LF Q  + G++ + +T S  LS  AS   + 
Sbjct: 505 MSQKDEVTWNSMISSFSQN--GKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIY 562

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ +H  +IK    AD+   +ALI MYAKCG+++ A ++F+ + D++ VSWN+++SAY 
Sbjct: 563 YGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYG 622

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HGL K ++ L   M+ EG+ PD ++ L ++ AC ++GL E G+ LF  + + Y + P +
Sbjct: 623 AHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRM 682

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           EHFACMVDL  R+G+L +A+  I   PF     +W  L+   ++  N + + +AS+ L  
Sbjct: 683 EHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFK 742

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           L+P ++G ++L+SN+ A  G  D  +KVR  M D ++ K  G SW+++++  H FVAS K
Sbjct: 743 LDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDK 802

Query: 722 DHPESEEIYSKLDLLNDEMK 741
            HPESE+IY+ L  L  E++
Sbjct: 803 SHPESEDIYTSLKTLLQELR 822



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 184/686 (26%), Positives = 338/686 (49%), Gaps = 38/686 (5%)

Query: 26  KVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLL 85
           K+P   F     S  A   +++ VS ++R L       +++  + +  L LG  +HA  +
Sbjct: 9   KLPPRPFCSTTFSATA---AVTDVSSADRLL------AVLRGCVSAPHLPLGLQIHARAV 59

Query: 86  KSGSQNDTFE---ANNLINLYAKFNRLDVAQKLFDGM---LVRSAITWTSLIKGYLDDGD 139
            SG+ +D         L+ +Y    R   A  +F  +      S++ W  LI+G+   G 
Sbjct: 60  VSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQ 119

Query: 140 YESVLGIACDMYR--SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           +   +     M+   +    + HT   ++++C+ L     G  +H  A   G  N+V+VG
Sbjct: 120 HHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVG 179

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           ++L+ MY  +G    A + F G+  +D    N M+    KAG+ + A  +F ++ +S  E
Sbjct: 180 SALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCE 239

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           PN  T    +SVC  +  +  G QLH LAVK G+  E++V N ++ MY K    ++A R+
Sbjct: 240 PNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRL 299

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F+ + + +L++W  +ISG V++G   +A   F +    G   DS  L +++   +  + L
Sbjct: 300 FELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGL 359

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           + G ++HG+ +++    DV L +ALVDIY K  D++ A+ L D          + ++SG+
Sbjct: 360 KQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGY 419

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           +  +    E+ + +F       ++P+ VT + +L   AS A L  G+ +H Y ++  Y  
Sbjct: 420 V--LNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYER 477

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
              V +AL+ MYAKCG +D +  IF  +S +D V+WN+M+S+++ +G  + AL LF +M 
Sbjct: 478 KCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMC 537

Query: 558 REGFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIEQIYGLRPILEHFA--CMVDL 610
            EG   ++I+I   L AC     IY G    G+ +   I+         + FA   ++D+
Sbjct: 538 MEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKA--------DIFAESALIDM 589

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSV--SKLMANSKFSILASKRLLDLEPKDAG 668
             + G L  A+ +    P  ++ + W +++S   +  +     S+L   +    +P D  
Sbjct: 590 YAKCGNLELALRVFEFMP-DKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKP-DHV 647

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMN 694
           +F+ + +  A  G+++E  ++   M 
Sbjct: 648 TFLALISACAHAGLVEEGVQLFQCMT 673


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/678 (33%), Positives = 374/678 (55%), Gaps = 15/678 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+A+HA +L +GS + T  AN+LINLYAK +    A  +FD +  +  ++W  LI  
Sbjct: 26  LRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINA 85

Query: 134 YLDDGDYESVLGI-----ACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           +     +   L +        M       N HT + +  A S L D   G Q HA A+K+
Sbjct: 86  FSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKT 145

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
              ++VF  +SL++MY  +G   EA ++F  +  ++      MI  Y     ++ AF +F
Sbjct: 146 ACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELF 205

Query: 249 VHLLSSDF--EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
             +   +     N++ FT+V+S     + V  G+Q+H LA+K G+V  +SV NA+VTMY 
Sbjct: 206 KLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYV 265

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  E+A + F+    +N I+W+A+++G+ + G   KA+  F +    G       L  
Sbjct: 266 KCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVG 325

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           VI+ CS    +  G Q+HG+++K GY   + + +ALVD+YAK G +  AR    GF C  
Sbjct: 326 VINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDAR---KGFECIQ 382

Query: 427 TAE---FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
             +   + +I++G+++    D E  + L+ + +L G+ P+ +T + +L   ++ A L +G
Sbjct: 383 QPDVVLWTSIITGYVQN--GDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQG 440

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +HA  IK  ++ ++ +G+AL  MYAKCGS+D  ++IF  +  RD++SWNAM+S  + +
Sbjct: 441 KQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQN 500

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G   L LFE+M  EG  PD+++ + +L AC + GL + G   F  +   + + P +EH
Sbjct: 501 GRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEH 560

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           +ACMVD+L RAG+L EA   I S+       LWR L++ SK   +      A ++L++L 
Sbjct: 561 YACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELG 620

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
             ++ +++L+S++Y   G  ++  +VR  M    ++KE GCSWIE+ S  H FV     H
Sbjct: 621 SLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGDNMH 680

Query: 724 PESEEIYSKLDLLNDEMK 741
           P+ +EI   L LL   MK
Sbjct: 681 PQIDEIRLGLKLLTKLMK 698



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 265/538 (49%), Gaps = 32/538 (5%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D + G+  HA  +K+   +D F A++L+N+Y K   +  A+ LFD M  R+A++W ++I 
Sbjct: 131 DSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMIS 190

Query: 133 GY----LDDGDYESVLGIACDMYRSEEKF---NEHTCSVILEA--CSLLEDRIFGEQIHA 183
           GY    L D  +E        + R EEK    NE   + +L A  C +L +   G Q+H+
Sbjct: 191 GYASQELADEAFELF-----KLMRHEEKGKNENEFVFTSVLSALTCYMLVNT--GRQVHS 243

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            A+K+G    V V  +L++MY   G   +A   F     K+    + M+  + + G+S+ 
Sbjct: 244 LAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDK 303

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +  S   P+++T   VI+ C +   + EG+Q+HG ++K G   ++ V +A+V 
Sbjct: 304 ALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVD 363

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G   +A + F+ I + +++ WT++I+GYV++G    A+N + +    G+  +   
Sbjct: 364 MYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLT 423

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           +A+V+  CS  + L+ G Q+H   IK+ +  ++ +G+AL  +YAK G L     +     
Sbjct: 424 MASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMP 483

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +NA++SG  +    +E   + LF +  L G +PD VTF  LLS  +    + RG
Sbjct: 484 ARDVISWNAMISGLSQNGRGNEG--LELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRG 541

Query: 484 RSLHAYSIKTGYAADVIVGNA-LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYA 541
                        A  +   A ++ + ++ G +  A +  +  + D  +  W  +L+A  
Sbjct: 542 WVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASK 601

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL--FNEIEQIYGL 597
            H           +     +A + +  LG L++  Y  LS     L  + ++E++ G+
Sbjct: 602 NH----------RDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGM 649



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 18/362 (4%)

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C  +  + +G+ LH   +  G      + N+++ +Y K     +A  +FD+I+ ++++SW
Sbjct: 20  CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79

Query: 330 TALISGYVRSGHGGKAINGFLEFLDL-----GICCDSSCLATVIDGCSVCSNLELGLQLH 384
             LI+ + +      +++    F  L      I  ++  L  V    S  S+   G Q H
Sbjct: 80  NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
             A+K     DV   ++L+++Y K G +  AR L D    +    +  ++SG+  +   D
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELAD 199

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
           E   +    +    G   +   F+ +LS       +  GR +H+ ++K G    V V NA
Sbjct: 200 EAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANA 259

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           L+TMY KCGS++ A + F+   +++ ++W+AM++ +A  G    AL LF +M + G  P 
Sbjct: 260 LVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPS 319

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH------FACMVDLLGRAGRLS 618
           + +++GV+ AC          C   E  Q++G    L +       + +VD+  + G + 
Sbjct: 320 EFTLVGVINAC-------SDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIV 372

Query: 619 EA 620
           +A
Sbjct: 373 DA 374


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/702 (30%), Positives = 369/702 (52%), Gaps = 33/702 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DLK G+ +H F+++ G   D F ++  +N YAK   +  AQ +FD M  R  +TW SL  
Sbjct: 156 DLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSS 215

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y++ G  +  L +  +M     K +  T S IL ACS L+D   G+ IH FA+K G   
Sbjct: 216 CYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVE 275

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVFV  +L+++Y    C REA+ VF  + +++V   N +   Y   G  +   +VF  + 
Sbjct: 276 NVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMG 335

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +  +P+    ++++  C +   ++ GK +HG AVK G+V ++ V  A+V +Y       
Sbjct: 336 LNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVR 395

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA+ +FD +  RN+++W +L S YV  G   K +N F E +  G+  D   + +++  CS
Sbjct: 396 EAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACS 455

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +L+ G  +HGFA++HG + DV +  AL+ +YAK   ++ A+++ D    +  A +N 
Sbjct: 456 DLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNG 515

Query: 433 ILSGFM-----------------EKIADDE----------------EDVMVLFSQQRLAG 459
           IL+ +                  +++  DE                E+ M +F + +  G
Sbjct: 516 ILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMG 575

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
            +PD  T   +L   +   CL  G+ +H Y  +     D+   NAL+ MYAKCG +  + 
Sbjct: 576 FKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSR 635

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
            +F  +  +D+ SWN M+ A  +HG GK AL LFE+M      PD  +   VL AC +S 
Sbjct: 636 NVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSM 695

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           L E G+ +FN + + + + P  EH+ C+VD+  RAG L EA   I   P   + + W+  
Sbjct: 696 LVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAF 755

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           ++  ++  N + + +++K+L +++P  + +++ + N+     +  EA+K+R  M +  ++
Sbjct: 756 LAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGIT 815

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           K  GCSW  + +++H FVA  K + ES++IY+ LD L  ++K
Sbjct: 816 KTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIK 857



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 179/657 (27%), Positives = 326/657 (49%), Gaps = 41/657 (6%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK+ Q  H    + G  +D    N  I+ Y K   ++ A+++FD ++ R  +TW SL   
Sbjct: 57  LKVKQ-FHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSAC 115

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y++ G  +  L +   M  ++ K N  T S IL  CS L+D   G++IH F ++ G   +
Sbjct: 116 YVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVED 175

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VFV ++ ++ Y    C REA+ VF  + ++DV   N +   Y   G  +   +VF  ++ 
Sbjct: 176 VFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVL 235

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +P+  T + ++S C +   ++ GK +HG A+K G+V  + V NA+V +Y       E
Sbjct: 236 DGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVRE 295

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+ +FD +  RN+I+W +L S YV  G   K +N F E    G+  D   +++++  CS 
Sbjct: 296 AQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQ 355

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +L+ G  +HGFA+KHG + DV + TALV++YA    ++ A+ + D    +    +N++
Sbjct: 356 LKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSL 415

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
            S ++       +  + +F +  L G++PD VT   +L   +    L  G+ +H ++++ 
Sbjct: 416 SSCYVN--CGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRH 473

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G   DV V NAL+++YAKC  +  A  +F  I  R++ SWN +L+AY  +   +  L +F
Sbjct: 474 GMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMF 533

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP-------------- 599
            +M R+    D+I+   V+  C+ +   E  + +F ++ Q  G +P              
Sbjct: 534 SQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKM-QTMGFKPDETTIYSILRACSL 592

Query: 600 -------------ILEHFA--------CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
                        +  H+          +VD+  + G LS + N+ +  P  +    W T
Sbjct: 593 SECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDV-FSWNT 651

Query: 639 LVSVSKLMANSKFSI-LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           ++  + +  N K ++ L  K LL +   D+ +F  V +  +   +++E  ++  +M+
Sbjct: 652 MIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMS 708



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 177/337 (52%), Gaps = 2/337 (0%)

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G    A  ++    +   +P+   F  V   C  +    + KQ H  A + GV+ ++S+G
Sbjct: 19  GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA +  YGK    E A R+FD +  R++++W +L + YV  G   + +N F +     + 
Sbjct: 79  NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +   +++++ GCS   +L+ G ++HGF ++HG + DV + +A V+ YAK   ++ A+ +
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D    +    +N++ S ++       +  + +F +  L G++PDPVT S +LS  +   
Sbjct: 199 FDLMPHRDVVTWNSLSSCYVN--CGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L  G+++H +++K G   +V V NAL+ +Y  C  +  A  +F  +  R++++WN++ S
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            Y   G  +  L +F EM   G  PD +++  +L AC
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPAC 353


>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 713

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/675 (33%), Positives = 372/675 (55%), Gaps = 24/675 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L  G+AVHA ++++G+   T  AN L+N YAK  +L  A  +F+ ++ +  ++W SLI 
Sbjct: 31  NLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLIT 90

Query: 133 GYLDDGDYES---VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           GY  +G   S   V+ +  +M   +   N +T + I +A S L+    G Q HA  +K  
Sbjct: 91  GYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMS 150

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRG--LAYK-DVRCVNFMILEYNKAGESEMAFH 246
              +++V TSL+ MY  +G  +    V+ G  L YK DV           +  +S + F 
Sbjct: 151 SFGDIYVDTSLVGMYCKAG-LKYLYMVYYGFWLCYKKDV---------LRRQLKSSICF- 199

Query: 247 VFVHLLSSDFEPN-DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
               L   + E + DY FT V+S     + V  G+Q+HG+ VK G++  +++ NA+VTMY
Sbjct: 200 ----LEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMY 255

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K     EA +MFD+  +RN I+W+A+++GY ++G   +AI  F      GI      + 
Sbjct: 256 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIV 315

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            V++ CS    L  G QLH F +K G+   +   TALVD+YAK G L  AR   D    +
Sbjct: 316 GVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 375

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
             A + +++SG+++    D E+ ++L+ + + AG+ P+  T + +L   +S A L  G+ 
Sbjct: 376 DVALWTSLISGYVQN--SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 433

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +H ++IK G+  +V +G+AL TMY KCGS++    +F+   ++D+VSWNAM+S  + +G 
Sbjct: 434 VHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 493

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G  AL LFEEM  EG  PDD++ + ++ AC + G  E G   F+ +   +GL P ++H+A
Sbjct: 494 GDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYA 553

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           CMVD+L RAG+L E    I S+       LWR L+S  K   N +  + A ++L+ L  +
Sbjct: 554 CMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSR 613

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           ++ +++ ++ +Y   G + +  +V   M    +SKE GCSWI + ++ H FV     HP 
Sbjct: 614 ESSTYVQLAGIYTALGRMRDVERVWKLMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPR 673

Query: 726 SEEIYSKLDLLNDEM 740
            EE    + L++ +M
Sbjct: 674 IEETKDLVSLVSRQM 688



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 3/112 (2%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T  + L+  +    LV GR++HA  I+TG +      N L+  YAKCG +  A  IF  I
Sbjct: 18  TLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAI 77

Query: 526 SDRDIVSWNAMLSAYALHG---LGKGALLLFEEMKREGFAPDDISILGVLQA 574
             +D+VSWN++++ Y+ +G        + LF EM+ +   P+  ++ G+ +A
Sbjct: 78  ICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKA 129


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/699 (33%), Positives = 370/699 (52%), Gaps = 11/699 (1%)

Query: 58  FNDWPQLVK-----ISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVA 112
           FN  P ++      +   S +L   ++ HA ++ +    D F A  L+  Y+    L+ A
Sbjct: 24  FNQLPTIIHNFLSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAA 83

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL 172
           + +FD       +   +++ GYL  G Y   L +   M     + +  +C+  L+AC+  
Sbjct: 84  RYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASS 143

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
            D   G +I + A++ G E N FVG+S+IS     G   EA+ VF G+  KDV C N +I
Sbjct: 144 LDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSII 203

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             Y +AG  ++AF +F  +  S  +P+  T T++I  C     ++ GK +HG  +  G+ 
Sbjct: 204 GGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLG 263

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            +I V  + V MY K G  E A  +F  +  RNL+SW A+ISG VR+G  G++ + F   
Sbjct: 264 NDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRL 323

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
           +      D + + +++ GCS  ++L  G  LHG AI+  + S++ L TA+VD+Y+K G L
Sbjct: 324 VRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSL 382

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           K A  + +    +    + A+L G  +      ED + LF+Q +  G+  + VTF  L+ 
Sbjct: 383 KQATFVFNRMKDRNVITWTAMLVGLAQN--GHAEDALRLFAQMQEEGIAANSVTFVSLVH 440

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK-GISDRDIV 531
             A    L RGRS+H +  + G+A D++   AL+ MYAKCG I+ A +IF  G   +D+V
Sbjct: 441 SCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVV 500

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
            WN+M++ Y +HG G  A+ ++ +M  EG  P+  + L +L AC +S L E GI LFN +
Sbjct: 501 LWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSM 560

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
           E+ + +RPI +H+AC+VDLL RAGR  EA  LI   PF     +   L+S  +   N   
Sbjct: 561 ERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINL 620

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
            I  S +LL L+  + G +I++SN+YA     D+   +R  M +  L K  G S +E  +
Sbjct: 621 GIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGN 680

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSS 748
            +H F A    HP  EEIY  L+ L   ++    V D+S
Sbjct: 681 WVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTS 719


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/689 (33%), Positives = 382/689 (55%), Gaps = 21/689 (3%)

Query: 73  DLKLGQAVHAFLLKSGS--QNDTFEANNLINLYAKFNRLDVAQKLFDGMLV--RSAITWT 128
           D+ LG+A+   LL++GS  + D   AN+L+ LY+K + +  A+ +FDGM V  R  ++WT
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED-RIFGEQIHAFAIK 187
           ++      +G     L +  +        N  T     +AC   E   + G  +     K
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181

Query: 188 SGF-ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
            GF   +V VG +LI M+  +G       VF GL  + V     +I  Y ++G S+ A  
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F+ +L + F+P+ YT ++++S C E      G+QLH LA++ G+  +  V   +V MY 
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYA 301

Query: 307 K--HGMS-EEAERMFDAISERNLISWTALISGYVRSG-HGGKAINGFLEFLDLGICCDSS 362
           K  +G S   A  +F+ + + N+++WTAL+SGYV+ G    + +  F + L+ GI  +  
Sbjct: 302 KSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHI 361

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL-GTALVDIYAKGGDLKSARMLLDG 421
             ++++  C+   + + G Q+H   +K   L+D+ + G ALV +YA+ G ++ AR   D 
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSN-LADLNVVGNALVSMYAESGSIEEARHAFDQ 420

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    F+  L G      D   +    +  +R+  +     TF  L+S +AS   L 
Sbjct: 421 LYEKNMVSFSGNLDG------DGRSNTYQDYQIERME-LGISTFTFGSLISAAASVGMLT 473

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           +G+ LHA S+K G+ +D  +GN+L++MY++CG +  A Q+F  ++D +++SW +M+S  A
Sbjct: 474 KGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLA 533

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HG    AL LF +M   G  P+D++ + VL AC ++GL + G   F  +++ +GL P +
Sbjct: 534 KHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRM 593

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           EH+ACMVDLLGR+G + +A++ IN  P     L+W+TL+   K   N     +A+  ++ 
Sbjct: 594 EHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQ 653

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           LEP+D   ++L+SN+YA  G+ D+ A++R+ M D  L KE G SW+ +D+ +H F A   
Sbjct: 654 LEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDT 713

Query: 722 DHPESEEIYSKLDLLNDEMKLK--VKDSS 748
            HP++EEIY+KL+ L  E+K+   V D+S
Sbjct: 714 SHPQAEEIYTKLETLIREIKVMGYVPDTS 742


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 225/692 (32%), Positives = 371/692 (53%), Gaps = 11/692 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F  +P L+K   G  D+  G+ +H  LLK G   D F  N+L+ +Y K      A  +F+
Sbjct: 39  FRFFPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFE 98

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKFNEHTCSVILEACSLLEDR 175
            M  R +++W ++I G+   GDY   L +   M +       N   C   L +C+ ++  
Sbjct: 99  RMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCL 158

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG-----LAYKDVRCVNF 230
             G +IH F +K G +++ F+ ++LI MY   G  + AENVF       L  +++   N 
Sbjct: 159 THGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNV 218

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
           MIL Y       +A  +FV +L     P+  T   V+ +C + L +  GKQ+HGL +  G
Sbjct: 219 MILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLG 278

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
           +  ++ VG A++ MY K G  E + ++F      NL+ W +++    ++G+  +A+  F 
Sbjct: 279 LDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFS 338

Query: 351 EF-LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
           EF LD G   D   L   +  CS  S    G+ +HGFAIK G+ SDV +G ALVD Y K 
Sbjct: 339 EFMLDCGFP-DPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKC 397

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           GD++ A+ +  G S +    +NA++SGF +    DE   +  F   +   ++P+ VT + 
Sbjct: 398 GDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADE--ALKAFRDMQSKQIKPNTVTMAC 455

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +LS+    + ++  + +H Y ++  +  + +V N+LI+ YAKCG I  +  +F+ +  R+
Sbjct: 456 ILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRN 515

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
            V+WN++L  + +HG        FE+MK     PD  +   +L +C +SG  + G   FN
Sbjct: 516 EVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFN 575

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            + + Y L P +E + CMVDLLGRAG L++A +LI S P S    +W +L++  K   N+
Sbjct: 576 SMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNT 635

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           K + + +  + +L+    G  +L++N+Y   G L+E  +VRT +  + L K+ GCSWIE+
Sbjct: 636 KLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEV 695

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           D+ +H FVA    H  S +IY+ ++ L+ EMK
Sbjct: 696 DNSIHIFVAGDYSHDRSGDIYATIESLSLEMK 727


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 237/710 (33%), Positives = 386/710 (54%), Gaps = 31/710 (4%)

Query: 47  SSVSCSERTL--LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYA 104
           SS+   E TL  +FN       I  GS D KLG+ VH   +K G  +      +L+++Y 
Sbjct: 87  SSLQPDESTLSCVFN-------ICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYM 139

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           K   ++  +++FD M  R+ ++WTSL+ GY  +G Y  V  + C M       N +T S 
Sbjct: 140 KTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVST 199

Query: 165 ILEACSLLEDRI--FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           ++ A  L+ + +   G Q+HA  +K GFE  + V  SLIS+Y   G  R+A +VF  +  
Sbjct: 200 VIAA--LVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI 257

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +D    N MI  Y + G+    F +F  +  +  +P   TF +VI  C     +   K +
Sbjct: 258 RDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLM 317

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE-RNLISWTALISGYVRSGH 341
              A+K G   +  V  A++    K    ++A  +F  + E +N++SWTA+ISG +++G 
Sbjct: 318 QCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGG 377

Query: 342 GGKAINGFLEFLDLGICCDS---SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
             +A+N F +    G+  +    S + TV     V        ++H   IK  Y     +
Sbjct: 378 NDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVS-------EMHAEVIKTNYERSSSV 430

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           GTAL+D Y K G+   A  + +    K    ++A+L+G+ +    + E+   LF Q    
Sbjct: 431 GTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQ--TGETEEAAKLFHQLIKE 488

Query: 459 GMEPDPVTFSRLLSLSAS-QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           G++P+  TFS +++  AS  A   +G+  HAY+IK      + V +AL+TMYAK G+ID 
Sbjct: 489 GIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDS 548

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A ++FK   +RD+VSWN+M+S Y+ HG  K AL +F+EM++     D ++ +GV+ AC +
Sbjct: 549 AHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTH 608

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           +GL E G   FN +   + + P ++H++CM+DL  RAG L +AM +IN  PF     +WR
Sbjct: 609 AGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWR 668

Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
           TL+  +++  N +   LA+++L+ L+P+D+ +++L+SNMYA  G   E   VR  M+  +
Sbjct: 669 TLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRK 728

Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDS 747
           + KE G SWIE+ +K + F+A    HP S +IYSKL     E+ +++KD+
Sbjct: 729 VKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKL----SELSIRLKDA 774



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 164/644 (25%), Positives = 290/644 (45%), Gaps = 48/644 (7%)

Query: 111 VAQKLFDGMLVRSAI--TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           +A  LFD +  R         L+  Y  D   +  L +   +  S  + +E T S +   
Sbjct: 43  IAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNI 102

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C+   D   G Q+H   +K G  ++V VGTSL+ MY  +    +   VF  +  ++V   
Sbjct: 103 CAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
             ++  Y+  G     + +F  +      PN YT + VI+       V  G Q+H + VK
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G    I V N+++++Y + GM  +A  +FD +  R+ ++W ++I+GYVR+G   +    
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F +    G+       A+VI  C+    L L   +   A+K G+ +D  + TAL+   +K
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSK 342

Query: 409 GGDLKSARMLLDGF-SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
             ++  A  L       K    + A++SG ++   +D+   + LFSQ R  G++P+  T+
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQ--AVNLFSQMRREGVKPNHFTY 400

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           S +L++       V    +HA  IKT Y     VG AL+  Y K G+   A ++F+ I  
Sbjct: 401 SAILTVHYP----VFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEA 456

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEGGIC 586
           +D+++W+AML+ YA  G  + A  LF ++ +EG  P++ +   V+ AC   +  +E G  
Sbjct: 457 KDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQ 516

Query: 587 LFNEIEQIYGLRPILEHFAC----MVDLLGRAGRLSEAMNLINSSPFSESPLL-WRTLVS 641
                   Y ++  L +  C    +V +  + G +  A  +       E  L+ W +++S
Sbjct: 517 F-----HAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQ--KERDLVSWNSMIS 569

Query: 642 VSKLMANSKFSILA----SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM-NDL 696
                  +K ++       KR +D+   DA +FI V       G++++  K   +M ND 
Sbjct: 570 GYSQHGQAKKALEVFDEMQKRNMDV---DAVTFIGVITACTHAGLVEKGQKYFNSMIND- 625

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
                            HH   + K +    ++YS+  +L   M
Sbjct: 626 -----------------HHINPTMKHYSCMIDLYSRAGMLEKAM 652


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/685 (33%), Positives = 369/685 (53%), Gaps = 34/685 (4%)

Query: 72  GDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGML-VRSAITWTS 129
           GDL+LG+A+H  LL+      D   AN+L+ LY++   +  A+ +FDGM  +R  ++WT+
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI--- 186
           +      +G     L +  +M  S    N +T   +  AC       F  +++       
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC-------FPHELYCLVGGVV 174

Query: 187 -----KSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
                K G +  ++ VG++LI M   +G    A  VF GL  K V     +I  Y +   
Sbjct: 175 LGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGEC 234

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +E A  +F+  L   FEP+ YT +++IS C E   V  G QLH LA++ G   +  V   
Sbjct: 235 AEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCG 294

Query: 301 IVTMYGKHGMSEE---AERMFDAISERNLISWTALISGYVRSG-HGGKAINGFLEFLDLG 356
           +V MY K  + +    A ++F+ + + ++ISWTALISGYV+SG    K +  F E L+  
Sbjct: 295 LVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNES 354

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +    ++++  C+  S+ + G Q+H   IK    +   +G ALV +YA+ G ++ AR
Sbjct: 355 IKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEAR 414

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            +           FN +    M     +  D  +     R+  M     TF+ L+S +AS
Sbjct: 415 RV-----------FNQLYERSMISCITEGRDAPLDHRIGRM-DMGISSSTFASLISAAAS 462

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L +G+ LHA ++K G+ +D  V N+L++MY++CG ++ A + F  + DR+++SW +M
Sbjct: 463 VGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSM 522

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S  A HG  + AL LF +M   G  P+D++ + VL AC + GL   G   F  +++ +G
Sbjct: 523 ISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHG 582

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           L P +EH+ACMVDLL R+G + EA+  IN  P     L+W+TL+   +   N +   +A+
Sbjct: 583 LIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAA 642

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           K +++LEP+D   ++L+SN+YA  G+ DE A++R+ M D  L+KE G SW+E+++  H F
Sbjct: 643 KNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEF 702

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
            A    HP +++IY KLD L  E+K
Sbjct: 703 RAGDTSHPRAQDIYGKLDTLVGEIK 727


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 229/685 (33%), Positives = 370/685 (54%), Gaps = 5/685 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++ S+ S  LK G+ +H  ++  G QND +   NLI+LY   N  D A+ +FD +    
Sbjct: 9   LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68

Query: 124 AITWTS-LIKGYLDDGDYESVLGIACD-MYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
            I+  + L+ GY  +  Y+  LG+    M     K + +T   +L+AC  L   + G+ I
Sbjct: 69  EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   +K G   ++ VG+SL+ MY     F  A  +F  +  KDV C N +I  Y ++G+ 
Sbjct: 129 HTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKF 188

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           E A   F  +    FEP+  T T  IS C   L ++ G+++H   V  G   +  V  A+
Sbjct: 189 EEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAAL 248

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V MYGK G  E A  +F+ +  + +++W ++I+GY   G G   I  F      G+    
Sbjct: 249 VDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTL 308

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           + L + +  CS  + L  G  +HG+ I++    D+ L ++L+D+Y K G ++SA  +   
Sbjct: 309 TTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKL 368

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
                T  +N ++SG++ +      D + LF +   + +EPD +TF+ +L+  +  A L 
Sbjct: 369 MPKTTTVSWNVMISGYVTE--GKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALE 426

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           +GR +H   ++     + +V  AL+ MYAKCG+++ AF +FK + +RD+VSW +M++AY 
Sbjct: 427 KGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYG 486

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HG    AL LF EM +    PD ++ L +L AC ++GL + G+  FN++  +YG+ P +
Sbjct: 487 SHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRI 546

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSP-FSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           EH++C++ LLGRAGRL EA  ++ S+P  S+   L  TL S  +L  N    +  ++ L+
Sbjct: 547 EHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLI 606

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           D +P D+ ++I++SNMYA  G  DE   VR+ M DL L K  GCSWIEI+ K+  F    
Sbjct: 607 DKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVED 666

Query: 721 KDHPESEEIYSKLDLLNDEMKLKVK 745
             H   E I + L  L   M+ + K
Sbjct: 667 NSHYHLEGIGNILSYLTSHMEDECK 691



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 228/488 (46%), Gaps = 9/488 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G   + LGQ +H  L+K G   D    ++L+ +YAK N  + A KLFD M 
Sbjct: 109 YPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMP 168

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +    W ++I  Y   G +E  L     M R   + +  T +  + +C+ L D   G +
Sbjct: 169 DKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGRE 228

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   + SGF  + FV  +L+ MY   G    A  VF  +  K V   N MI  Y   G+
Sbjct: 229 IHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGD 288

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
                 +F  + S   +P   T T+ +  C ++  + EGK +HG  ++  +  +I + ++
Sbjct: 289 GISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSS 348

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G  E AE +F  + +   +SW  +ISGYV  G    A+  F E     +  D
Sbjct: 349 LMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPD 408

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +    +V+  CS  + LE G ++H   ++    ++  +  AL+D+YAK G ++ A  +  
Sbjct: 409 AITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFK 468

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               +    + ++++ +         + + LF++   + ++PD VTF  +LS + S A L
Sbjct: 469 CLPERDLVSWTSMITAYGSH--GRVYEALELFAEMLQSNVKPDRVTFLAILS-ACSHAGL 525

Query: 481 VRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKG---ISDRDIVSWNA 535
           V     H   +   Y     + +   LIT+  + G +  A++I +    ISD D    + 
Sbjct: 526 VDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISD-DFQLLST 584

Query: 536 MLSAYALH 543
           + SA  LH
Sbjct: 585 LFSACRLH 592


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 224/700 (32%), Positives = 381/700 (54%), Gaps = 31/700 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           + KLG  +H   L+ G   D    + L+++YAK  RLD +  +F  M  ++ I+W+++I 
Sbjct: 196 NYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIA 255

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G + +   +  L +  +M +     ++   + +L++C+ L D   G Q+HA A+KS F  
Sbjct: 256 GCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVK 315

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  V T+ + MY      ++A+ +F      +++  N MI  Y++      A  +F  L 
Sbjct: 316 DGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLS 375

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S    ++ + +  +  C    G+ EG QLHGLA K    R I V NA + MYGK    +
Sbjct: 376 KSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALD 435

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA R+FD +  ++ +SW A+I+ + ++    K +N  +  L  G+  D     +V+  C+
Sbjct: 436 EACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACA 495

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD------GFSCKY 426
              +L  G+++H   +K G  S+  +G++LVD+Y+K G +  A  + +      G S  Y
Sbjct: 496 -GDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTY 554

Query: 427 T---------------------AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           +                       +NAI+SG++ +     ED    F++    G+ PD  
Sbjct: 555 SEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMR--KQSEDAQRFFNRMMEMGITPDKF 612

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T+S +L   A+ A +  G+ +HA+ IK     DV + + L+ MY+KCG++  +  +F+  
Sbjct: 613 TYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKA 672

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
             RD V+WNAM+  YA HG+G+ A+ LFE M      P+  + + +L+AC + GL E G+
Sbjct: 673 PIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGL 732

Query: 586 CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
             F+ +++ YGL P LEH++ MVD+LG++G + +A+ LI   PF    ++WRTL+S  K+
Sbjct: 733 DYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKI 792

Query: 646 -MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
              N + + +A+  LL L+P+D+ ++IL+SN+YA  GM D+A+++RT M   +L KE GC
Sbjct: 793 NRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKKEPGC 852

Query: 705 SWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKV 744
           SW+EI  + H F+   K HP  +EIY+ L L+ +EM L V
Sbjct: 853 SWVEIRDEFHTFLVGDKAHPRWKEIYNGLALIYNEMNLSV 892



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 192/738 (26%), Positives = 328/738 (44%), Gaps = 89/738 (12%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           +LG+  HA ++ SG +   F +N L+ LY     L  A KLFDGM +R  ++W ++I GY
Sbjct: 66  ELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGY 125

Query: 135 -------------------------------LDDGDYESVLGIACDMYRSEEKFNEHTCS 163
                                          L  G+    + +  +M RS  +F+  + S
Sbjct: 126 AASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFS 185

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
           VIL+ CS+LE+   G QIH  A++ G++ +V  G++L+ MY       E+  VF  +  K
Sbjct: 186 VILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQK 245

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           +    + +I    +    +    +F  +       +   + +V+  C     +  G QLH
Sbjct: 246 NWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLH 305

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
             A+K   V++  V  A + MY K    ++A+R+FD     NL S+ A+I+GY +  +G 
Sbjct: 306 AHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGF 365

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
           +A+  F +     +  D   L+  +  C+    L  GLQLHG A K  +  ++ +  A +
Sbjct: 366 RALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFI 425

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D+Y K   L  A  + D    K    +NAI++   E+  +  + + +L S  R +GMEPD
Sbjct: 426 DMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAH-EQNEERSKTLNILVSMLR-SGMEPD 483

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF- 522
             TF  +L   A  + L  G  +H   +K G A++  +G++L+ MY+KCG ID A +I  
Sbjct: 484 EYTFGSVLKACAGDS-LNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHN 542

Query: 523 ----------------------KGISDRD----IVSWNAMLSAYALHGLGKGALLLFEEM 556
                                 KGI DR     IVSWNA++S Y +    + A   F  M
Sbjct: 543 KIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRM 602

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG--LRPILEH--FAC--MVDL 610
              G  PD  +   VL  C  + L+  G+      +QI+   ++  L++  + C  +VD+
Sbjct: 603 MEMGITPDKFTYSTVLDTC--ANLASIGLG-----KQIHAHVIKKELQYDVYICSTLVDM 655

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAG 668
             + G L ++  +   +P  +  + W  ++       M      +  S  L+++ P  A 
Sbjct: 656 YSKCGNLHDSRLMFEKAPIRDF-VTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHA- 713

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +F+ +    A  G+++        M      KE G     +D +L H+        +S E
Sbjct: 714 TFVSLLRACAHMGLVERGLDYFHMM-----KKEYG-----LDPRLEHYSNMVDILGKSGE 763

Query: 729 IYSKLDLLNDEMKLKVKD 746
           +   L+L+  EM  +  D
Sbjct: 764 VEKALELIQ-EMPFEADD 780



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 245/510 (48%), Gaps = 43/510 (8%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           S + + C+       G+Q HA  I SGF   VFV   L+ +Y + G    A  +F G+  
Sbjct: 53  SFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPL 112

Query: 223 KDVRCVNFMILEYN-------------------------------KAGESEMAFHVFVHL 251
           +DV   N MI  Y                                + GE+  +  VF+ +
Sbjct: 113 RDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEM 172

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             S  E ++ +F+ ++ VC      + G Q+HG+A++ G   ++  G+A++ MY K    
Sbjct: 173 GRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRL 232

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           +E+  +F A+ ++N ISW+A+I+G V++      +  F E   +G+    S  A+V+  C
Sbjct: 233 DESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSC 292

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +   +L LG QLH  A+K  ++ D  + TA +D+YAK  +++ A+ L D         +N
Sbjct: 293 ATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYN 352

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+++G+ +K  D+    ++LF +   + +  D ++ S  L   A+   L  G  LH  + 
Sbjct: 353 AMITGYSQK--DNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLAT 410

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K+ ++ ++ V NA I MY KC ++D A ++F  +  +D VSWNA+++A+  +      L 
Sbjct: 411 KSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLN 470

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           +   M R G  PD+ +   VL+AC    L+ G       ++      P +   + +VD+ 
Sbjct: 471 ILVSMLRSGMEPDEYTFGSVLKACAGDSLNHGMEIHTTIVKLGMASNPYIG--SSLVDMY 528

Query: 612 GRAGRLSEAMNLIN--------SSPFSESP 633
            + G + EA  + N        S+ +SE P
Sbjct: 529 SKCGMIDEAEKIHNKIFIGIGDSNTYSEHP 558



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 247/536 (46%), Gaps = 62/536 (11%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           +F+  E  K    E+      H++ S F P     T  +S C   L +  G   +   + 
Sbjct: 53  SFVFKECAKQRAHELGKQAHAHMIISGFRP-----TVFVSNCLLQLYINCGNLGYATKLF 107

Query: 289 FGV-VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
            G+ +R++   NA++  Y        A   F+ +  R+++SW +++SG++++G   +++ 
Sbjct: 108 DGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVK 167

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
            F+E    G+  D+   + ++  CS+  N +LG Q+HG A++ GY +DV  G+AL+D+YA
Sbjct: 168 VFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYA 227

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           K   L  +  +      K    ++AI++G ++    D    + +F + +  G+      +
Sbjct: 228 KCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLD--GGLKMFKEMQKVGVGVSQSIY 285

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           + +L   A+   L  G  LHA+++K+ +  D IV  A + MYAKC ++  A ++F    +
Sbjct: 286 ASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSEN 345

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEG--- 583
            ++ S+NAM++ Y+    G  ALLLF ++ +     D+IS+ G L+AC    GLSEG   
Sbjct: 346 LNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQL 405

Query: 584 -----------GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
                       IC+ N    +YG    L+    + D +GR   +S              
Sbjct: 406 HGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVS-------------- 451

Query: 633 PLLWRTLVSVSKLMA--NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
              W  +++  +     +   +IL S     +EP D  +F  V    AG   L+   ++ 
Sbjct: 452 ---WNAIIAAHEQNEERSKTLNILVSMLRSGMEP-DEYTFGSVLKACAGDS-LNHGMEIH 506

Query: 691 TTMNDLRLSKE-----------AGCSWIEIDSKLHH--FVASG-----KDHPESEE 728
           TT+  L ++             + C  I+   K+H+  F+  G      +HPE+ E
Sbjct: 507 TTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIE 562



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 53/109 (48%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
            FS +    A Q     G+  HA+ I +G+   V V N L+ +Y  CG++  A ++F G+
Sbjct: 51  NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
             RD+VSWNAM+  YA       A L FE M        +  + G LQ 
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQT 159


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/685 (31%), Positives = 375/685 (54%), Gaps = 9/685 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-LVR 122
            +K  I +    +G  VH  L +S  Q D+   N+LI+LY+K  + + A  +F  M   R
Sbjct: 72  FLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSR 131

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
             I+W++++  + ++      L    DM  +    NE+  +    ACS  E    G+ I 
Sbjct: 132 DLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIF 191

Query: 183 AFAIKSGF-ENNVFVGTSLISMYFHS-GCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
            F +K+G+ +++V VG  LI M+    G    A  VF  +  ++      MI    + G 
Sbjct: 192 GFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGY 251

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +  A  +F+ ++ S +EP+ +T + VIS C     +  G+QLH  A++ G+  +  VG  
Sbjct: 252 AGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCC 311

Query: 301 IVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYV-RSGHGGKAINGFLEFLDLG 356
           ++ MY K    G    A ++FD I + N+ SWTA+I+GYV + G+  +A++ F   +   
Sbjct: 312 LINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTH 371

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  +    ++ +  C+  + L +G Q+   A+K G+ S   +  +L+ +YA+ G +  AR
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR 431

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
              D    K    +N ++  + + +  + E+ + LF++    GM     TF+ LLS +AS
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNL--NSEEALELFNEIEDQGMGASAFTFASLLSGAAS 489

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              + +G  +HA  IK+G   +  V NALI+MY++CG+I+ AFQ+F+ + DR+++SW ++
Sbjct: 490 IGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSI 549

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++ +A HG    AL LF +M  EG  P+ ++ + VL AC + GL   G   F  +   +G
Sbjct: 550 ITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHG 609

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P +EH+ACMVD+LGR+G LSEA+  INS P+    L+WRT +   ++  N +    A+
Sbjct: 610 VIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAA 669

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           K +++ EP D  ++IL+SN+YA     DE + +R  M +  L KEAGCSW+E+++K+H F
Sbjct: 670 KMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKF 729

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
                 HP++ EIY +L  L+ ++K
Sbjct: 730 YVGDTSHPKAAEIYDELQNLSVKIK 754



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 215/419 (51%), Gaps = 7/419 (1%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
            T S+ L+ C        G  +H    +S  + +     SLIS+Y   G + +A ++F+ 
Sbjct: 67  QTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQL 126

Query: 220 L-AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
           + + +D+   + M+  +        A   FV ++ + + PN+Y F      C     V  
Sbjct: 127 MGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSV 186

Query: 279 GKQLHGLAVKFGVVR-EISVGNAIVTMYGK-HGMSEEAERMFDAISERNLISWTALISGY 336
           G  + G  VK G ++ ++ VG  ++ M+ K  G    A ++F+ + ERN ++WT +I+  
Sbjct: 187 GDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL 246

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           ++ G+ G+AI+ FLE +  G   D   L+ VI  C+    L LG QLH  AI+HG   D 
Sbjct: 247 MQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306

Query: 397 RLGTALVDIYAK---GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
            +G  L+++YAK    G + +AR + D         + A+++G+++K   DEE  + LF 
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEE-ALDLFR 365

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
              L  + P+  TFS  L   A+ A L  G  +  +++K G+++   V N+LI+MYA+ G
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
            ID A + F  + +++++S+N ++ AYA +   + AL LF E++ +G      +   +L
Sbjct: 426 RIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G  PD  T+S  L           G  +H    ++    D +  N+LI++Y+KCG  + A
Sbjct: 61  GSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKA 120

Query: 519 FQIFKGI-SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             IF+ + S RD++SW+AM+S +A + +G  ALL F +M   G+ P++       +AC
Sbjct: 121 TSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRAC 178


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 224/674 (33%), Positives = 371/674 (55%), Gaps = 7/674 (1%)

Query: 62  PQLVKISIGSGD---LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           PQLV I     D   L  G+  HA +L +G   +      L+ +Y        A+ +F  
Sbjct: 47  PQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQ 106

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           + +  +  W  +I+G+   G ++  L     M       +++T   +++AC  L     G
Sbjct: 107 LRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H      GFE +VFVG+SLI  Y  +GC  +A  +F  +  KD    N M+  Y K 
Sbjct: 167 RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKN 226

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G+ + A  VF+ +  ++  PN  TF  V+SVC   + +  G QLHGL V  G+  +  V 
Sbjct: 227 GDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVA 286

Query: 299 N--AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           N  A++ +Y K    E A ++FD  +  +++  TA+ISGYV +G    A+  F   L   
Sbjct: 287 NTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 346

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  +S  LA+V+  C+  + L LG +LHG  +K+G+     +G+A++D+YAK G L  A 
Sbjct: 347 MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAH 406

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
               G S K    +N++++   +      E+ + LF Q  +AG + D V+ S  LS  A+
Sbjct: 407 QTFIGISDKDAVCWNSMITSCSQN--GKPEEAIDLFRQMGMAGTKYDCVSISAALSACAN 464

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L  G+ +HA+ ++  + +D+   +ALI MY+KCG++D A ++F  + +++ VSWN++
Sbjct: 465 LPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSI 524

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++AY  HG  K +L LF  M  +G  PD ++ L ++ AC ++G  + GI  F  + +  G
Sbjct: 525 IAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELG 584

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           +   +EH+ACMVDL GRAGRL+EA  +INS PFS    +W TL+   +L  N + + +AS
Sbjct: 585 IMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVAS 644

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           + L DL+P+++G ++L+SN++A  G  +   K+R+ M +  + K  GCSWI++++  H F
Sbjct: 645 RNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMF 704

Query: 717 VASGKDHPESEEIY 730
           VA+ + HP+S +IY
Sbjct: 705 VAADRSHPQSSQIY 718



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 228/490 (46%), Gaps = 10/490 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G   + LG+ VH  +   G + D F  ++LI  Y++   +  A+ LFD M 
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  + W  ++ GY+ +GD+++  G+  +M R+E   N  T + +L  C+      FG Q
Sbjct: 210 SKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQ 269

Query: 181 IHAFAIKSGFENNVFVGTS--LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +H   + SG E +  V  +  LI +YF       A  +F      D+     MI  Y   
Sbjct: 270 LHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLN 329

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G +  A  +F  LL      N  T  +V+  C     +  GK+LHG  +K G      VG
Sbjct: 330 GMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG 389

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           +AI+ MY K G  + A + F  IS+++ + W ++I+   ++G   +AI+ F +    G  
Sbjct: 390 SAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTK 449

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D   ++  +  C+    L  G ++H F ++  + SD+   +AL+D+Y+K G+L  A  +
Sbjct: 450 YDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRV 509

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D    K    +N+I++ +        +D + LF      G++PD VTF  ++S      
Sbjct: 510 FDTMEEKNEVSWNSIIAAYGNH--GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAG 567

Query: 479 CLVRGRSLHAYSIKT---GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWN 534
            +  G  +H +   T   G  A +     ++ ++ + G ++ AF +   +    D   W 
Sbjct: 568 QVDEG--IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWG 625

Query: 535 AMLSAYALHG 544
            +L A  LHG
Sbjct: 626 TLLGACRLHG 635


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 223/669 (33%), Positives = 351/669 (52%), Gaps = 4/669 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK G+ +H  +LKS  Q D    N+++N+Y K   L  A+K FD M +R+ ++WT +I G
Sbjct: 173 LKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISG 232

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G     + +   M +S    +  T   I++AC +  D   G Q+H   IKSG++++
Sbjct: 233 YSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHH 292

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +    +LISMY   G    A +VF  ++ KD+     MI  + + G    A ++F  +  
Sbjct: 293 LIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFR 352

Query: 254 SDF-EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
             F +PN++ F +V S C   L  E G+Q+HG+  KFG+ R +  G ++  MY K G   
Sbjct: 353 QGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLP 412

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A R F  I   +L+SW A+I+ +  SG   +AI  F + +  G+  D     +++  C 
Sbjct: 413 SAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACG 472

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT-AEFN 431
               +  G Q+H + IK G   +  +  +L+ +Y K  +L  A  +    S       +N
Sbjct: 473 SPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWN 532

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           AILS  ++     E  V  LF     +  +PD +T + +L   A  A L  G  +H +S+
Sbjct: 533 AILSACLQHKQAGE--VFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSV 590

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K+G   DV V N LI MYAKCGS+  A  +F    + DIVSW++++  YA  GLG  AL 
Sbjct: 591 KSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALN 650

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF  MK  G  P++++ LGVL AC + GL E G   +N +E   G+ P  EH +CMVDLL
Sbjct: 651 LFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLL 710

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG L EA N I    F+    +W+TL++  K   N   +  A++ +L L+P ++ + +
Sbjct: 711 ARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALV 770

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+SN++A  G   E A++R  M  + + K  G SWI +  ++H F +    H +  +IY+
Sbjct: 771 LLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYT 830

Query: 732 KLDLLNDEM 740
            L+ L  +M
Sbjct: 831 MLEDLWLQM 839


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/687 (32%), Positives = 377/687 (54%), Gaps = 14/687 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K      DL  G  +H   +K G  +  F  N+L+ LYAK N ++ A+KLFD M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 121 VRS-AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF-- 177
           VR+  ++W S+I  Y  +G     L +  +M ++    N +T +  L+AC   ED  F  
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQAC---EDSSFIK 177

Query: 178 -GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G QIHA  +KSG   +V+V  +L++MY   G   EA  +F  L  KD+   N M+  + 
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFI 237

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREI 295
           + G    A   F  L ++D +P+  +  ++I V    LG +  GK++H  A+K G    I
Sbjct: 238 QNGLYSEALEFFYDLQNADLKPDQVSIISII-VASGRLGYLLNGKEIHAYAIKNGFDSNI 296

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VGN ++ MY K        R FD ++ ++LISWT   +GY ++    +A+    +    
Sbjct: 297 LVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQME 356

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D++ + +++  C   + L    ++HG+ I+ G LSD  L   ++D+Y + G +  A
Sbjct: 357 GMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGG-LSDPVLQNTIIDVYGECGIIDYA 415

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
             + +   CK    + +++S ++   +A+   +V   FS  +  G+EPD VT   +LS  
Sbjct: 416 VRIFESIECKDVVSWTSMISCYVHNGLANKALEV---FSSMKETGLEPDYVTLVSILSAV 472

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
            S + L +G+ +H + I+ G+  +  + N L+ MYA+CGS++ A++IF    +R+++ W 
Sbjct: 473 CSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWT 532

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM+SAY +HG G+ A+ LF  MK E   PD I+ L +L AC +SGL   G      ++  
Sbjct: 533 AMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCE 592

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           Y L P  EH+ C+VDLLGR   L EA  ++ S     +P +W  L+   ++ +N +   +
Sbjct: 593 YQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEV 652

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
           A+++LL+L+  + G+++LVSN++A  G   +  +VR  M    L+K  GCSWIE+ +K+H
Sbjct: 653 AAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIH 712

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMK 741
            F++  K HPE ++IY KL  + +++K
Sbjct: 713 AFLSRDKLHPECDKIYQKLAQVTEKLK 739



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 280/548 (51%), Gaps = 20/548 (3%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y K   +  A+ +FD M  RS  TW +++ GY+ +G+    L +  +M      F+ +T
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF-RGL 220
             V+L+AC ++ED   G +IH  AIK G ++ VFV  SL+++Y        A  +F R  
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
              DV   N +I  Y+  G    A  +F  +L +    N YTF   +  C ++  ++ G 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           Q+H   +K G V ++ V NA+V MY + G   EA  +F  +  +++++W ++++G++++G
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +A+  F +  +  +  D   + ++I        L  G ++H +AIK+G+ S++ +G 
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
            L+D+YAK   +       D  + K    +    +G+ +     +   + L  Q ++ GM
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQ--ALELLRQLQMEGM 358

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           + D      +L       CL + + +H Y+I+ G  +D ++ N +I +Y +CG ID A +
Sbjct: 359 DVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVR 417

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA-CIYSG 579
           IF+ I  +D+VSW +M+S Y  +GL   AL +F  MK  G  PD ++++ +L A C  S 
Sbjct: 418 IFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLST 477

Query: 580 LSEGGICLFNEIEQIYG--LRP--ILEHFA--CMVDLLGRAGRLSEAMNLINSSPFSESP 633
           L +G        ++I+G  +R   ILE      +VD+  R G + +A  +   +  + + 
Sbjct: 478 LKKG--------KEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTK-NRNL 528

Query: 634 LLWRTLVS 641
           +LW  ++S
Sbjct: 529 ILWTAMIS 536


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/685 (31%), Positives = 376/685 (54%), Gaps = 9/685 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-LVR 122
            +K  I +    +G  VH  L +S  Q D+   N+LI+LY+K  + + A  +F  M   R
Sbjct: 72  FLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSR 131

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
             I+W++++  + ++      L    DM  +    NE+  +    ACS  E    G+ I 
Sbjct: 132 DLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIF 191

Query: 183 AFAIKSGF-ENNVFVGTSLISMYFHS-GCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
            F IK+G+ +++V VG  LI M+    G    A  VF  +  ++      MI    + G 
Sbjct: 192 GFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGY 251

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +  A  +F+ ++ S +EP+ +T + VIS C     +  G+QLH  A++ G+  +  VG  
Sbjct: 252 AGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCC 311

Query: 301 IVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYV-RSGHGGKAINGFLEFLDLG 356
           ++ MY K    G    A ++FD I + N+ SWTA+I+GYV + G+  +A++ F   +   
Sbjct: 312 LINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTH 371

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  +    ++ +  C+  + L +G Q+   A+K G+ S   +  +L+ +YA+ G +  AR
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR 431

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
              D    K    +N ++  + + +  + E+ + LF++    GM     TF+ LLS +AS
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNL--NSEEALELFNEIEDQGMGASAFTFASLLSGAAS 489

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              + +G  +HA  IK+G   +  V NALI+MY++CG+I+ AFQ+F+ + DR+++SW ++
Sbjct: 490 IGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSI 549

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++ +A HG    AL LF +M  EG  P++++ + VL AC + GL   G   F  +   +G
Sbjct: 550 ITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHG 609

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P +EH+AC+VD+LGR+G LSEA+  INS P+    L+WRT +   ++  N +    A+
Sbjct: 610 VIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAA 669

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           K +++ EP D  ++IL+SN+YA     DE + +R  M +  L KEAGCSW+E+++K+H F
Sbjct: 670 KMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKF 729

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
                 HP++ EIY +L  L+ ++K
Sbjct: 730 YVGDTSHPKAAEIYDELQNLSVKIK 754



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 215/419 (51%), Gaps = 7/419 (1%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
            T S+ L+ C        G  +H    +S  + +     SLIS+Y   G + +A ++FR 
Sbjct: 67  QTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRL 126

Query: 220 L-AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
           + + +D+   + M+  +        A   FV ++ + + PN+Y F      C     V  
Sbjct: 127 MGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSV 186

Query: 279 GKQLHGLAVKFGVVR-EISVGNAIVTMYGK-HGMSEEAERMFDAISERNLISWTALISGY 336
           G  + G  +K G ++ ++ VG  ++ M+ K  G    A ++F+ + ERN ++WT +I+  
Sbjct: 187 GDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL 246

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           ++ G+ G+AI+ FL+ +  G   D   L+ VI  C+    L LG QLH  AI+HG   D 
Sbjct: 247 MQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306

Query: 397 RLGTALVDIYAK---GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
            +G  L+++YAK    G + +AR + D         + A+++G+++K   DEE  + LF 
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEE-ALDLFR 365

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
              L  + P+  TFS  L   A+ A L  G  +  +++K G+++   V N+LI+MYA+ G
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
            ID A + F  + +++++S+N ++ AYA +   + AL LF E++ +G      +   +L
Sbjct: 426 RIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G  PD  T+S  L           G  +H    ++    D +  N+LI++Y+KCG  + A
Sbjct: 61  GSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKA 120

Query: 519 FQIFKGI-SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             IF+ + S RD++SW+AM+S +A + +G  ALL F +M   G+ P++       +AC
Sbjct: 121 TSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRAC 178


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/687 (33%), Positives = 369/687 (53%), Gaps = 38/687 (5%)

Query: 72  GDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGML-VRSAITWTS 129
           GDL+LG+A+H  LL+      D   AN+L+ LY++   +  A+ +FDGM  +R  ++WT+
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI--- 186
           +      +G     L +  +M  S    N +T      AC       F  +++       
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHAC-------FPHELYCLVGGVV 174

Query: 187 -----KSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
                K G +  +V VG++LI M   +G    A  VF GL  K V     +I  Y +   
Sbjct: 175 LGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGEC 234

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +E A  +F+  L   FEP+ YT +++IS C E   V  G QLH LA++ G+  +  V   
Sbjct: 235 AEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCG 294

Query: 301 IVTMYGKHGMSEE---AERMFDAISERNLISWTALISGYVRSG-HGGKAINGFLEFLDLG 356
           +V MY K  + +    A ++F+ + + ++ISWTALISGYV+SG    K +  F E L+  
Sbjct: 295 LVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNES 354

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +    ++++  C+  S+ + G Q+H   IK    S   +G ALV +YA+ G ++ AR
Sbjct: 355 IKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEAR 414

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP--DPVTFSRLLSLS 474
            +           FN +    M     +  D  +     R+  M+      TF+ L+S +
Sbjct: 415 RV-----------FNQLYERSMIPCITEGRDFPL---DHRIVRMDVGISSSTFASLISAA 460

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           AS   L +G+ LHA S+K G+ +D  V N+L++MY++CG ++ A + F  + DR+++SW 
Sbjct: 461 ASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWT 520

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           +M+S  A HG  + AL LF +M   G  P+D++ + VL AC + GL   G   F  +++ 
Sbjct: 521 SMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRD 580

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           +GL P +EH+ACMVDLL R+G + EA+  IN  P     L+W+TL+   +   N +   +
Sbjct: 581 HGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEI 640

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
            +K +++LEP+D   ++L+SN+YA  G+ DE A++R+ M D  L+KE G SW+E+++  H
Sbjct: 641 TAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTH 700

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMK 741
            F A    HP +++IY KLD L  ++K
Sbjct: 701 EFRAGDTSHPRAQDIYGKLDTLVRQIK 727


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/665 (33%), Positives = 337/665 (50%), Gaps = 24/665 (3%)

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC--DMYRSEEKFNEHTCSVIL 166
           L  A  LFD +      T+  LI+ Y       +  G+     M R     N +T    L
Sbjct: 73  LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132

Query: 167 EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR 226
           +ACS L D   G  IH  AI +G + ++FV T+L+ MY    C  +A ++F  +  +D+ 
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLSSDFE-----PNDYTFTNVISVCYENLGVEEGKQ 281
             N M+  Y   G   M  H   HLLS   +     PN  T   ++ +  +   + +G  
Sbjct: 193 AWNAMLAGYAHHG---MYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 282 LHGLAV----------KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
           +H   +          K  +   + +G A++ MY K G    A R+FDA+  RN ++W+A
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           LI G+V      +A   F   L  G+C    + +A+ +  C+   +L +G QLH    K 
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G  +D+  G +L+ +YAK G +  A  L D  + K T  ++A++SG+++      E+  +
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN--GRAEEAFL 427

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           +F + +   +EPD  T   L+   +  A L  GR  H   I  G A++  + NALI MYA
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 487

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG ID + Q+F  +  RDIVSWN M++ Y +HGLGK A  LF EM   GF PD ++ + 
Sbjct: 488 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           +L AC +SGL   G   F+ +   YGL P +EH+ CMVDLL R G L EA   I S P  
Sbjct: 548 LLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 607

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
               +W  L+   ++  N       S+ + +L P+  G+F+L+SN+Y+  G  DEAA+VR
Sbjct: 608 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVR 667

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD-LLNDEMKLKVKDSSA 749
                    K  GCSWIEI+  LH FV   + HP+S EIY +LD +L    KL  +  ++
Sbjct: 668 IIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTS 727

Query: 750 FELQD 754
           F LQD
Sbjct: 728 FVLQD 732



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 247/525 (47%), Gaps = 34/525 (6%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P  +K      D   G+A+H   + +G Q D F +  L+++Y K   L  A  +F  M 
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187

Query: 121 VRSAITWTSLIKGYLDDGDYESVLG--IACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
            R  + W +++ GY   G Y   +   ++  M     + N  T   +L   +       G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247

Query: 179 EQIHAFAIKSGFENN----------VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
             +HA+ I++   +N          V +GT+L+ MY   G    A  VF  +  ++    
Sbjct: 248 TSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTW 307

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSD---FEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
           + +I  +        AF +F  +L+       P   +  + +  C     +  G+QLH L
Sbjct: 308 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHAL 365

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
             K GV  +++ GN++++MY K G+ ++A  +FD ++ ++ +S++AL+SGYV++   G+A
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN---GRA 422

Query: 346 INGFLEFLDLGIC---CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
              FL F  +  C    D++ + ++I  CS  + L+ G   HG  I  G  S+  +  AL
Sbjct: 423 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNAL 482

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+YAK G +  +R + +    +    +N +++G+   I    ++   LF +    G  P
Sbjct: 483 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY--GIHGLGKEATALFLEMNNLGFPP 540

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSI-KTGYAADVIVGN--ALITMYAKCGSIDGAF 519
           D VTF  LLS  +    ++ G+  H + + + GY     + +   ++ + ++ G +D A+
Sbjct: 541 DGVTFICLLSACSHSGLVIEGK--HWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAY 598

Query: 520 QIFKGISDR-DIVSWNAMLSAYALHG---LGKGALLLFEEMKREG 560
           +  + +  R D+  W A+L A  ++    LGK    + +E+  EG
Sbjct: 599 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 643



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 12/242 (4%)

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G L  A  L D         +N ++  +         D + L+ +     + P+  TF  
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
            L   ++ A    GR++H ++I  G  AD+ V  AL+ MY KC  +  A  IF  +  RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 530 IVSWNAMLSAYALHGLGKGAL--LLFEEMKREGFAPDDISILGVLQACIYSG-LSEGG-- 584
           +V+WNAML+ YA HG+   A+  LL  +M+     P+  +++ +L      G L++G   
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 585 ------ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
                  CL +       L   +     ++D+  + G L  A  + ++ P + + + W  
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP-ARNEVTWSA 309

Query: 639 LV 640
           L+
Sbjct: 310 LI 311


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/698 (33%), Positives = 386/698 (55%), Gaps = 25/698 (3%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LV 121
           L+K  I + +  LG+ +H  L  S    DT   N+LI LY+K N    A  +F  M    
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIF--G 178
           R  ++++S+I  + ++ +    + +   +   +  + NE+  + ++ AC  L+   F  G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRAC--LKGGFFKTG 175

Query: 179 EQIHAFAIKSG-FENNVFVGTSLISMYFHSGC----FREAENVFRGLAYKDVRCVNFMIL 233
             +  F +K+G F+++V VG  LI M F  GC       A  VF  +  K+V     MI 
Sbjct: 176 LCLFGFVLKTGYFDSHVCVGCELIDM-FVKGCSLADLESARKVFDKMREKNVVTWTLMIT 234

Query: 234 EYNKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
              + G ++ A  +F+ +L SS + P+ +T T +ISVC E   +  GK+LH   ++ G+V
Sbjct: 235 RLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLV 294

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG--GKAINGFL 350
            ++ VG ++V MY K G+ +EA ++FD + E N++SWTAL++GYVR G G   +A+  F 
Sbjct: 295 LDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFS 354

Query: 351 E-FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
              L  G+  +    + V+  C+   + + G Q+HG  IK G  +   +G  LV +YAK 
Sbjct: 355 NMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKS 414

Query: 410 GDLKSARMLLDG-FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
           G ++SAR   D  F     +E     +   +   + E+D   L  +    G      T++
Sbjct: 415 GRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQD---LDREVEYVGSGVSSFTYA 471

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            LLS +A    + +G  +HA  +K G+  D+ V NALI+MY+KCG+ + A Q+F  + D 
Sbjct: 472 SLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDC 531

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           ++++W ++++ +A HG    AL LF  M   G  P+D++ + VL AC + GL +     F
Sbjct: 532 NVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHF 591

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +   +G+ P +EH+ACMVDLLGR+G LSEA+  INS PF    L+WRT +   ++  N
Sbjct: 592 TSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRN 651

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           +K    A+K +L+ EP D  ++IL+SN+YA +G  ++ A +R  M   +++KEAG SWIE
Sbjct: 652 TKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIE 711

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKD 746
           +++++H F      HP++++IY KL    DE+ LK+K+
Sbjct: 712 VENQVHKFHVGDTLHPKAQQIYEKL----DELALKIKN 745


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/665 (33%), Positives = 337/665 (50%), Gaps = 24/665 (3%)

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC--DMYRSEEKFNEHTCSVIL 166
           L  A  LFD +      T+  LI+ Y       +  G+     M R     N +T    L
Sbjct: 73  LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132

Query: 167 EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR 226
           +ACS L D   G  IH  AI +G + ++FV T+L+ MY    C  +A ++F  +  +D+ 
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLSSDFE-----PNDYTFTNVISVCYENLGVEEGKQ 281
             N M+  Y   G   M  H   HLLS   +     PN  T   ++ +  +   + +G  
Sbjct: 193 AWNAMLAGYAHHG---MYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 282 LHGLAV----------KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
           +H   +          K  +   + +G A++ MY K G    A R+FDA+  RN ++W+A
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           LI G+V      +A   F   L  G+C    + +A+ +  C+   +L +G QLH    K 
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G  +D+  G +L+ +YAK G +  A  L D  + K T  ++A++SG+++      E+  +
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN--GRAEEAFL 427

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           +F + +   +EPD  T   L+   +  A L  GR  H   I  G A++  + NALI MYA
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 487

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG ID + Q+F  +  RDIVSWN M++ Y +HGLGK A  LF EM   GF PD ++ + 
Sbjct: 488 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           +L AC +SGL   G   F+ +   YGL P +EH+ CMVDLL R G L EA   I S P  
Sbjct: 548 LLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 607

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
               +W  L+   ++  N       S+ + +L P+  G+F+L+SN+Y+  G  DEAA+VR
Sbjct: 608 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVR 667

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD-LLNDEMKLKVKDSSA 749
                    K  GCSWIEI+  LH FV   + HP+S EIY +LD +L    KL  +  ++
Sbjct: 668 IIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTS 727

Query: 750 FELQD 754
           F LQD
Sbjct: 728 FVLQD 732



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 241/523 (46%), Gaps = 30/523 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P  +K      D   G+A+H   + +G Q D F +  L+++Y K   L  A  +F  M 
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187

Query: 121 VRSAITWTSLIKGYLDDGDYESVLG--IACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
            R  + W +++ GY   G Y   +   ++  M     + N  T   +L   +       G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247

Query: 179 EQIHAFAI----------KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
             +HA+ I          KS   + V +GT+L+ MY   G    A  VF  +  ++    
Sbjct: 248 TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTW 307

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSD---FEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
           + +I  +        AF +F  +L+       P   +  + +  C     +  G+QLH L
Sbjct: 308 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHAL 365

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
             K GV  +++ GN++++MY K G+ ++A  +FD ++ ++ +S++AL+SGYV++   G+A
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN---GRA 422

Query: 346 INGFLEFLDLGIC---CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
              FL F  +  C    D++ + ++I  CS  + L+ G   HG  I  G  S+  +  AL
Sbjct: 423 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNAL 482

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+YAK G +  +R + +    +    +N +++G+   I    ++   LF +    G  P
Sbjct: 483 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY--GIHGLGKEATALFLEMNNLGFPP 540

Query: 463 DPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           D VTF  LLS  +    ++ G+   H      G    +     ++ + ++ G +D A++ 
Sbjct: 541 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF 600

Query: 522 FKGISDR-DIVSWNAMLSAYALHG---LGKGALLLFEEMKREG 560
            + +  R D+  W A+L A  ++    LGK    + +E+  EG
Sbjct: 601 IQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 643



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 7/185 (3%)

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G L  A  L D         +N ++  +         D + L+ +     + P+  TF  
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
            L   ++ A    GR++H ++I  G  AD+ V  AL+ MY KC  +  A  IF  +  RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 530 IVSWNAMLSAYALHGLGKGAL--LLFEEMKREGFAPDDISILGVL-----QACIYSGLSE 582
           +V+WNAML+ YA HG+   A+  LL  +M+     P+  +++ +L     Q  +  G S 
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 583 GGICL 587
              C+
Sbjct: 251 HAYCI 255


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 207/622 (33%), Positives = 338/622 (54%), Gaps = 21/622 (3%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  ++ + WTS++ GY  +G  E+ L +  DM  S    N+  C+  L AC+ L     G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           EQ+H+ A+++GF  + ++G+ LI MY   G    A+ VF  +   DV     +I  + + 
Sbjct: 61  EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV- 297
           GE E+A    + +L    +PN++T T +++ C   LG    +Q+HG  +K   +R  SV 
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLG----QQIHGYLIKKIGLRSQSVY 176

Query: 298 -GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
              A++  Y ++G  + A+ +FD++  +N++SW +++  Y+R G   +A+  F + +  G
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  +   L+ V+     C ++ LG QLH  AIKH  ++D+R+  AL+ +Y + G ++   
Sbjct: 237 VDPNEFALSIVL---GACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 293

Query: 417 MLLDGFSCKYTAEFNAILS-----GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
            +L+         +   +S     GF EK        + L  Q    G  P+   FS +L
Sbjct: 294 AMLNKIENPDLVSWTTAISANFQNGFGEK-------AIALLCQMHSEGFTPNGYAFSSVL 346

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           S  A  A L +G   H  ++K G  +++  GNALI MY+KCG +  A   F  +   D+ 
Sbjct: 347 SSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVT 406

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           SWN+++  +A HG    AL +F +M+  G  PDD + LGVL  C +SG+ E G   F  +
Sbjct: 407 SWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLM 466

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
              Y   P   H+ACM+D+LGR GR  EA+ +IN  PF    L+W+TL++  KL  N   
Sbjct: 467 IDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDI 526

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
             LA+ RL++L  +D+ S++L+SN+YA  G  ++A KVR  M++  + K+AGCSWIEI++
Sbjct: 527 GKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINN 586

Query: 712 KLHHFVASGKDHPESEEIYSKL 733
           ++H F +    HP S+ IY  L
Sbjct: 587 EVHTFASRDMSHPNSDSIYQML 608



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 248/477 (51%), Gaps = 15/477 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ G+ VH+  +++G   D +  + LI +Y++   L  A+++FD M     + +TSLI
Sbjct: 55  GALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 114

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GF 190
             +  +G++E        M +   K NEHT + IL AC     R+ G+QIH + IK  G 
Sbjct: 115 SAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHGYLIKKIGL 170

Query: 191 EN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            + +V+  T+LI  Y  +G F+ A+ VF  L  K+V     M+  Y + G  E A  VF 
Sbjct: 171 RSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFG 230

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            ++S   +PN++  + V+  C  ++G+  G+QLH  A+K  ++ +I V NA+++MYG+ G
Sbjct: 231 DMISEGVDPNEFALSIVLGAC-GSIGL--GRQLHCSAIKHDLITDIRVSNALLSMYGRTG 287

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           + EE E M + I   +L+SWT  IS   ++G G KAI    +    G   +    ++V+ 
Sbjct: 288 LVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLS 347

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+  ++L+ G+Q H  A+K G  S++  G AL+++Y+K G + SAR+  D         
Sbjct: 348 SCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTS 407

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N+++ G  +    D    + +FS+ R  G++PD  TF  +L +  + + +V    L   
Sbjct: 408 WNSLIHGHAQH--GDANKALEVFSKMRSNGIKPDDSTFLGVL-MGCNHSGMVEEGELFFR 464

Query: 490 SIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            +   Y+      +   +I M  + G  D A ++   +  + D + W  +L++  LH
Sbjct: 465 LMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 521


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/712 (31%), Positives = 375/712 (52%), Gaps = 36/712 (5%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            G+ VH+ L+  G + DTF  N LI++YAK +  +   K+FD M  R+ +TW S+I     
Sbjct: 295  GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 354

Query: 137  DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
             G +   L +   M  S  K N      IL A + L D   G ++H   +++   +++ +
Sbjct: 355  FGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIIL 414

Query: 197  GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD- 255
            G++L+ MY   G   EA  VFR L  ++    N ++  Y + G++E A  ++  + S D 
Sbjct: 415  GSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDG 474

Query: 256  FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             +P+ +TFT ++++C       +G+Q+H   ++  + + I V   +V MY + G    A+
Sbjct: 475  IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 534

Query: 316  RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
             +F+ ++ERN  SW ++I GY ++G   +A+  F +    GI  D   L++++  C   S
Sbjct: 535  EIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594

Query: 376  NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL----------------------- 412
            + + G +LH F +++    +  L   LVD+YAK G +                       
Sbjct: 595  DSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVS 654

Query: 413  --------KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
                      A+ L D    + TA +N+IL+G+  K    E      F +   + +E D 
Sbjct: 655  AFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKES--FNHFLEMLESDIEYDV 712

Query: 465  VTFSRLLSLSASQACLVRGRSLHAYSIKTGYA-ADVIVGNALITMYAKCGSIDGAFQIFK 523
            +T   +++L +S   L  G  LH+  IK G+    V++  AL+ MY+KCG+I  A  +F 
Sbjct: 713  LTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFD 772

Query: 524  GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
             ++ ++IVSWNAM+S Y+ HG  K AL+L+EEM ++G  P++++ L +L AC ++GL E 
Sbjct: 773  NMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEE 832

Query: 584  GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
            G+ +F  +++ Y +    EH+ CMVDLLGRAGRL +A   +   P       W  L+   
Sbjct: 833  GLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGAC 892

Query: 644  KLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAG 703
            ++  +     LA++RL +L+P++ G ++++SN+YA  G   E   +R  M    + K+ G
Sbjct: 893  RVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPG 952

Query: 704  CSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
             SWIEI+S++  F A  K HP++EEIY+ L  L  + K L     ++F LQ+
Sbjct: 953  VSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQN 1004



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 176/636 (27%), Positives = 320/636 (50%), Gaps = 23/636 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD---VAQKLFD 117
           +  L++  I S   + G+++H  ++ +G   D +    ++ LYA+   LD    A+KLF+
Sbjct: 74  YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  R+   W ++I  Y    DY  VL +   M  S    ++ T   +++AC  +ED   
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGG 193

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             Q+ +  +K+G   N+FVG +L+  Y   G   +A      +    V   N +I  Y K
Sbjct: 194 VRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK 253

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
               E A+ +F  +L     P+++TF + + VC      + GKQ+H   +  G   +  V
Sbjct: 254 ILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFV 313

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA++ MY K    E   ++FD + ERN ++W ++IS   + GH   A+  FL   + G 
Sbjct: 314 GNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGY 373

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +   L +++   +  +++  G +LHG  +++   SD+ LG+ALVD+Y+K G ++ A  
Sbjct: 374 KSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQ 433

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +      +    +NA+L+G++++    EE + +    Q   G++PD  TF+ LL+L A+Q
Sbjct: 434 VFRSLLERNEVSYNALLAGYVQE-GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQ 492

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
               +GR +HA+ I+     ++IV   L+ MY++CG ++ A +IF  +++R+  SWN+M+
Sbjct: 493 RNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMI 552

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             Y  +G  + AL LF++M+  G  PD  S+  +L +C+    S+ G  L N I     +
Sbjct: 553 EGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFI-----V 607

Query: 598 RPILEH----FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKF 651
           R  +E        +VD+  + G +  A  + + +   +  +L   +VS  V+   AN   
Sbjct: 608 RNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQT-IKKDVILNNVMVSAFVNSGRAND-- 664

Query: 652 SILASKRLLD-LEPKDAGSFILVSNMYAGQGMLDEA 686
               +K L D +E ++   +  +   YA +G+  E+
Sbjct: 665 ----AKNLFDQMEQRNTALWNSILAGYANKGLKKES 696



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%)

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG---AF 519
           +P+ +S L+          RG+S+H   I  GY  D  +   ++ +YA+ G +D    A 
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
           ++F+ + +R++ +WN M+ AYA        L L+  M+  G   D  +   V++ACI
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACI 186


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/704 (31%), Positives = 369/704 (52%), Gaps = 44/704 (6%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VH  L + G   D +  N+LIN Y+KF  +   +++F  M +R  +TW+S+I  Y  
Sbjct: 97  GKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAG 156

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIFGEQIHAFAIKSGFENN 193
           +            M  +  + N  T   IL+AC   S+LE      +IH     SG E +
Sbjct: 157 NNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEK---AREIHTVVKASGMETD 213

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V V T+LI+MY   G    A  +F+ +  ++V     +I    +  +   AF ++  +L 
Sbjct: 214 VAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ 273

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +   PN  TF ++++ C     +  G+++H    + G+  ++ V NA++TMY K    ++
Sbjct: 274 AGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQD 333

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGK-AINGFLEFLDL----GICCDSSCLATVI 368
           A   FD +S+R++ISW+A+I+GY +SG+  K +++   + L+     G+  +     +++
Sbjct: 334 ARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSIL 393

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA--------------------- 407
             CSV   LE G Q+H    K G+ SD  L TA+ ++YA                     
Sbjct: 394 KACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVV 453

Query: 408 ----------KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
                     K GDL SA  +    S +    +N +++G+ +  + D   V  L S  ++
Sbjct: 454 AWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQ--SGDIAKVFELLSSMKV 511

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
            G +PD VT   +L    + + L RG+ +HA ++K G  +D +V  +LI MY+KCG +  
Sbjct: 512 EGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTE 571

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F  IS+RD V+WNAML+ Y  HG+G  A+ LF+ M +E   P++I+   V+ AC  
Sbjct: 572 ARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGR 631

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           +GL + G  +F  +++ + ++P  +H+ CMVDLLGRAGRL EA   I   P      +W 
Sbjct: 632 AGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWH 691

Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
            L+   K   N + +  A+  +L LEP +A  ++ +SN+YA  G  D++ KVR  M+D  
Sbjct: 692 ALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKG 751

Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           L K+ G S IEID ++H FVA    HPE + I+++L++L  EMK
Sbjct: 752 LKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMK 795



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 145/578 (25%), Positives = 265/578 (45%), Gaps = 40/578 (6%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           N +T   I+E C+ L     G+ +H    + G   ++++G SLI+ Y   G     E VF
Sbjct: 77  NSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVF 136

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
           R +  +DV   + MI  Y        AF  F  +  ++ EPN  TF +++  C     +E
Sbjct: 137 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLE 196

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           + +++H +    G+  +++V  A++TMY K G    A  +F  + ERN++SWTA+I    
Sbjct: 197 KAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANA 256

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           +     +A   + + L  GI  ++    ++++ C+    L  G ++H    + G  +DV 
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV 316

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE---DVMVLFSQ 454
           +  AL+ +Y K   ++ AR   D  S +    ++A+++G+ +    D+E   +V  L  +
Sbjct: 317 VANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLER 376

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD---------------- 498
            R  G+ P+ VTF  +L   +    L +GR +HA   K G+ +D                
Sbjct: 377 MRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGS 436

Query: 499 ---------------VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
                          V+   +L+TMY KCG +  A ++F  +S R++VSWN M++ YA  
Sbjct: 437 IYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQS 496

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIEQIYGLRPILE 602
           G       L   MK EGF PD ++I+ +L+AC   S L  G +     ++   GL     
Sbjct: 497 GDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVK--LGLESDTV 554

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL-D 661
               ++ +  + G ++EA  + +    +   + W  +++          ++   KR+L +
Sbjct: 555 VATSLIGMYSKCGEVTEARTVFDKIS-NRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKE 613

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKV-RTTMNDLRL 698
             P +  +F  V +     G++ E  ++ R    D R+
Sbjct: 614 RVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRM 651



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 203/411 (49%), Gaps = 9/411 (2%)

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           KAG  + A  +   +       N  T+  +I  C +    E+GK +H    + G+  +I 
Sbjct: 55  KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           +GN+++  Y K G     E++F  ++ R++++W+++I+ Y  + H  KA + F    D  
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +     +++  C+  S LE   ++H      G  +DV + TAL+ +Y+K G++  A 
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLAC 234

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            +      +    + AI+    +    +E     L+ +   AG+ P+ VTF  LL+   +
Sbjct: 235 EIFQKMKERNVVSWTAIIQANAQHRKLNE--AFELYEKMLQAGISPNAVTFVSLLNSCNT 292

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L RGR +H++  + G   DV+V NALITMY KC  I  A + F  +S RD++SW+AM
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAM 352

Query: 537 LSAYALHGLGKGALL-----LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           ++ YA  G      L     L E M+REG  P+ ++ + +L+AC   G  E G  +  EI
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI 412

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            ++ G          + ++  + G + EA  +  S   +++ + W +L+++
Sbjct: 413 SKV-GFESDRSLQTAIFNMYAKCGSIYEAEQVF-SKMENKNVVAWASLLTM 461



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 228/513 (44%), Gaps = 50/513 (9%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+  + +H  +  SG + D   A  LI +Y+K   + +A ++F  M  R+ ++WT++I+ 
Sbjct: 195 LEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQA 254

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
                       +   M ++    N  T   +L +C+  E    G +IH+   + G E +
Sbjct: 255 NAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETD 314

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-----AFHVF 248
           V V  +LI+MY    C ++A   F  ++ +DV   + MI  Y ++G  +       F + 
Sbjct: 315 VVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLL 374

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +      PN  TF +++  C  +  +E+G+Q+H    K G   + S+  AI  MY K 
Sbjct: 375 ERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKC 434

Query: 309 GMSEE-------------------------------AERMFDAISERNLISWTALISGYV 337
           G   E                               AE++F  +S RN++SW  +I+GY 
Sbjct: 435 GSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYA 494

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           +SG   K           G   D   + ++++ C   S LE G  +H  A+K G  SD  
Sbjct: 495 QSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTV 554

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK-IADDEEDVMVLFSQQR 456
           + T+L+ +Y+K G++  AR + D  S + T  +NA+L+G+ +  I  +  D+     ++R
Sbjct: 555 VATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKER 614

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSL-----HAYSIKTGYAADVIVGNALITMYAK 511
           +    P+ +TF+ ++S       +  GR +       + +K G          ++ +  +
Sbjct: 615 VP---PNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQH----YGCMVDLLGR 667

Query: 512 CGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            G +  A +  + +  + DI  W+A+L A   H
Sbjct: 668 AGRLQEAEEFIQRMPCEPDISVWHALLGACKSH 700



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 131/301 (43%), Gaps = 45/301 (14%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL- 130
           G L+ G+ +HA + K G ++D      + N+YAK   +  A+++F  M  ++ + W SL 
Sbjct: 400 GALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLL 459

Query: 131 ------------------------------IKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
                                         I GY   GD   V  +   M     + +  
Sbjct: 460 TMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRV 519

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   ILEAC  L     G+ +HA A+K G E++  V TSLI MY   G   EA  VF  +
Sbjct: 520 TIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKI 579

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
           + +D    N M+  Y + G    A  +F  +L     PN+ TFT VIS C     V+EG+
Sbjct: 580 SNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGR 639

Query: 281 QLHGLAVKFGVVRE---ISVGN----AIVTMYGKHGMSEEAERMFDAIS-ERNLISWTAL 332
           ++      F +++E   +  G      +V + G+ G  +EAE     +  E ++  W AL
Sbjct: 640 EI------FRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHAL 693

Query: 333 I 333
           +
Sbjct: 694 L 694


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/680 (32%), Positives = 367/680 (53%), Gaps = 2/680 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +VK     G L LG+ VH      G   D +  + LI +YA    LD A+++FDGM  
Sbjct: 151 PYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDE 210

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  + W  ++ GY+  GD  S +G+   M  S    N  T +  L  C+   D + G Q+
Sbjct: 211 RDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQL 270

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H  A+K G E  V V  +L+SMY    C  EA  +F  +   D+   N MI    + G  
Sbjct: 271 HTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLV 330

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  +F  +  S  +P+  T  +++    E  G ++GK++HG  V+     ++ + +A+
Sbjct: 331 DDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSAL 390

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V +Y K      A+ +FDA    +++  + +ISGYV +     A+  F   L LGI  ++
Sbjct: 391 VDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNA 450

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             +A+ +  C+  + + +G +LHG+ +K+ Y     + +AL+D+Y+K G L  +  +   
Sbjct: 451 VMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSK 510

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            S K    +N+++S F +    + E+ + LF Q  + G++ + VT S +LS  A    + 
Sbjct: 511 MSAKDEVTWNSMISSFAQN--GEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIY 568

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ +H   IK    AD+   +ALI MY KCG+++ A ++F+ + +++ VSWN+++SAY 
Sbjct: 569 YGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYG 628

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HGL K ++ L   M+ EGF  D ++ L ++ AC ++G  + G+ LF  + + Y + P +
Sbjct: 629 AHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQV 688

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           EH +CMVDL  RAG+L +AM  I   PF     +W  L+   ++  N + + +AS+ L  
Sbjct: 689 EHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFK 748

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           L+P + G ++L+SN+ A  G  D  +K+R  M D ++ K  G SW+++++  H FVA+ K
Sbjct: 749 LDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADK 808

Query: 722 DHPESEEIYSKLDLLNDEMK 741
           +HP+SEEIY  L  L  E+K
Sbjct: 809 NHPDSEEIYMSLKSLIIELK 828



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 174/627 (27%), Positives = 307/627 (48%), Gaps = 24/627 (3%)

Query: 30  NTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSG- 88
            +F P P+  ++   S ++ S +  +        L++  +    L LG  +HA  + SG 
Sbjct: 8   RSFKPPPRKWLSAAFSETASSATNASPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGL 67

Query: 89  ----SQNDTFEANNLINLYAKFNRLDVAQKLFDGM---LVRSAITWTSLIKGYLDDGDYE 141
                         L+ +Y    R   A  +F  +      +A+ W  LI+G+   G + 
Sbjct: 68  LDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHR 127

Query: 142 SVLGIACDMYR--SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
             +     M+   S  + + HT   ++++C+ L     G  +H      G + +++VG++
Sbjct: 128 LAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSA 187

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           LI MY  +G    A  VF G+  +D    N M+  Y KAG+   A  +F  + +S  +PN
Sbjct: 188 LIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPN 247

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T    +SVC     +  G QLH LAVK+G+  E++V N +V+MY K    EEA R+F 
Sbjct: 248 FATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFG 307

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            +   +L++W  +ISG V++G    A+  F +    G+  DS  LA+++   +  +  + 
Sbjct: 308 LMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQ 367

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G ++HG+ +++    DV L +ALVDIY K  D++ A+ + D          + ++SG++ 
Sbjct: 368 GKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYV- 426

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
            +    E  + +F      G++P+ V  +  L   AS A +  G+ LH Y +K  Y    
Sbjct: 427 -LNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRC 485

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            V +AL+ MY+KCG +D +  +F  +S +D V+WN+M+S++A +G  + AL LF +M  E
Sbjct: 486 YVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIME 545

Query: 560 GFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           G   ++++I  +L AC     IY G    GI +   I      R  L   + ++D+ G+ 
Sbjct: 546 GVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPI------RADLFAESALIDMYGKC 599

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVS 641
           G L  A+ +    P  ++ + W +++S
Sbjct: 600 GNLELALRVFEHMP-EKNEVSWNSIIS 625


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/678 (33%), Positives = 375/678 (55%), Gaps = 16/678 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  +G+ VH   LKSG   D     +L+++Y K    +  + +FD M +++ ++WTSL+ 
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS 178

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF--GEQIHAFAIKSGF 190
           GY  +G  + V+ +   M       N  T + +L A  L ++ I   G Q+HA  +K+GF
Sbjct: 179 GYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGA--LADESIIEGGVQVHAMIVKNGF 236

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E   FV  +LI MY  S    +AE VF  +  +D    N MI  Y   G     F +F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  +  + +   F   + +C +   +   KQLH   VK G      +  A++  Y K   
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 311 SEEAERMFD-AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            +EA ++F  A +  N+++WTA+I G+V++ +  KA++ F +    G+  +    +TV+ 
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           G        L  QLH   IK  Y     + TAL+D Y K G++  +  +      K    
Sbjct: 417 G----KPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVA 472

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSLHA 488
           ++A+L+G  +    D E  M +F Q    G++P+  TFS +++  +S A  V  G+ +HA
Sbjct: 473 WSAMLTGLAQ--TRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            ++K+G +  + V +AL+TMY+K G+I+ A ++F    +RDIVSWN+M++ Y  HG  K 
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKK 590

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL +F+ M+ +G   DD++ +GVL AC ++GL E G   FN + + Y +   +EH++CMV
Sbjct: 591 ALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMV 650

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DL  RAG   +AM++IN  PF  SP +WRTL++  ++  N +   LA+++L+ L+P DA 
Sbjct: 651 DLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAV 710

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            ++L+SN++A  G  +E A VR  M++ ++ KEAGCSWIEI +++  F+A    HP S+ 
Sbjct: 711 GYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDL 770

Query: 729 IYSKLDLLNDEMKLKVKD 746
           +Y+KL    +E+ +K+KD
Sbjct: 771 VYAKL----EELSIKLKD 784



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 238/512 (46%), Gaps = 13/512 (2%)

Query: 66  KISIGSGDLKLG-QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           KI++G+G L+     +  FL   G     F  +  +   +  +R   A +LFD   ++  
Sbjct: 15  KITVGNGRLQSSIHHIKHFLHPHG-----FLYHQSLPFISLPSRPRYAHQLFDETPLKDI 69

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
             +  L+  +  +      L +  D++ S    +  T S  L+ C +L D++ G Q+H  
Sbjct: 70  SHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQ 129

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           ++KSGF  +V VGTSL+ MY  +  F +   +F  +  K+V     ++  Y + G ++  
Sbjct: 130 SLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEV 189

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            H+   +      PN +TF  V+    +   +E G Q+H + VK G      V NA++ M
Sbjct: 190 IHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICM 249

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K  M  +AE +FD++  R+ ++W  +I GY   G   +    F      G+    +  
Sbjct: 250 YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVF 309

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
            T +  CS    L    QLH   +K+GY     + TAL+  Y+K   +  A  L      
Sbjct: 310 CTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADA 369

Query: 425 KY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    + A++ GF++   ++ E  + LF Q    G+ P+  T+S +L+   S       
Sbjct: 370 AHNVVTWTAMIGGFVQN--NNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL---- 423

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             LHA  IK  Y     V  AL+  Y K G++  + ++F  I  +DIV+W+AML+  A  
Sbjct: 424 SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQT 483

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
              + A+ +F ++ +EG  P++ +   V+ AC
Sbjct: 484 RDSEKAMEVFIQLVKEGVKPNEYTFSSVINAC 515



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 2/173 (1%)

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           + A  L D    K  + +N +L  F     D E   + LF     +G+  D +T S  L 
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDRE--ALHLFKDLHSSGLGVDGLTLSCALK 112

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
           +       V GR +H  S+K+G+  DV VG +L+ MY K    +    IF  +  +++VS
Sbjct: 113 VCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVS 172

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
           W ++LS YA +GL    + L  +M+ EG  P+  +   VL A     + EGG+
Sbjct: 173 WTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGV 225



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 9/160 (5%)

Query: 68  SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
           S  +  ++ G+ +HA  +KSG  N    ++ L+ +Y+K   ++ A+K+F     R  ++W
Sbjct: 516 SSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSW 575

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLE--DRIFGEQIH 182
            S+I GY   GD +  L +   M       ++ T   +L AC+   L+E  ++ F   I 
Sbjct: 576 NSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
            + I    E+     + ++ +Y  +G F +A ++  G+ +
Sbjct: 636 DYHIDKKIEHY----SCMVDLYSRAGMFDKAMDIINGMPF 671


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/637 (34%), Positives = 349/637 (54%), Gaps = 6/637 (0%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           L  ++H  +LK G  N  F ++ LI++Y+K +R+  A+ LFD M  R  ++W S+I GY 
Sbjct: 59  LATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYS 118

Query: 136 DDGDYESVLGIACDMYRSEEKF----NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             G  E   G+ C M  S E +    ++ T + +L+AC  L     G+ +H +A+K GF+
Sbjct: 119 QRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFD 178

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +++FV  S + MY   G    A   F  +  KD+   N MI  Y +    E A  +F  +
Sbjct: 179 SDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQM 238

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
               F+PND TF  V+           G+  H   +K G   ++ V  A+V MY K    
Sbjct: 239 ELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDI 298

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+ ER F  +S+RNL+S+ ALI+GY   G   +A+  + +    G+  DS     +   C
Sbjct: 299 EDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSC 358

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           SV S +  G Q+H  ++K G  SDV +G ++V+ Y+K G   SA    +  +   +  + 
Sbjct: 359 SVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWA 418

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            I+SGF +    + E  ++ F + R    + D  + S ++   +S A + +GR LHA+ +
Sbjct: 419 GIISGFAQN--GEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVM 476

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K+G    + VG+A+I MY+KCG ++ A ++F  + ++++VSWN+M++ YA +G  K ALL
Sbjct: 477 KSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALL 536

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF+EM   G  P  ++ +G+L AC ++GL E G   +N +   YG+ P +EH  CMVDLL
Sbjct: 537 LFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLL 596

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAG L EA   + SS FS+ P +W +L+S   +  NS     A++  L LEP  + S+ 
Sbjct: 597 GRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYT 656

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            +SN+YA + +  E +++R  M D+ + KE GCSWIE
Sbjct: 657 ALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 259/528 (49%), Gaps = 10/528 (1%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           ML  + + WTS I      G  +  L     M R+  + N  T S  + AC+        
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H   +K GF N +FV + LISMY      +EA  +F  +  +D    N MI  Y++ 
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 239 GESEMAFHVFVHLLSS----DFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVR 293
           G +E A  +F  +++S        +D+T   V+  C   LG    GK +HG AVK G   
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKAC-GGLGCSRIGKCVHGYAVKIGFDS 179

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
           ++ V  + V MY K G+ + A   FD I  +++++W  +I+GY ++ +  +AI  F +  
Sbjct: 180 DLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQME 239

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
             G   + +    V+   +  S+  +G   H   +K G   DV + TALVD+Y+K  D++
Sbjct: 240 LEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
                    S +    FNA+++G+   +    E+ + ++SQ +  GMEPD  TF  L S 
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGY--SLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSS 357

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +  + +  G  +H +S+K G  +DV VGN+++  Y+KCG  D A + F+ I+  + V W
Sbjct: 358 CSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCW 417

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
             ++S +A +G G+ AL+ F +M++     D+ S   V++A       E G  L   + +
Sbjct: 418 AGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMK 477

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             GL   +   + ++D+  + G + +A  + +  P  ++ + W ++++
Sbjct: 478 -SGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMIT 523



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 248/500 (49%), Gaps = 10/500 (2%)

Query: 50  SCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN 107
           SC    LL +D+    ++K   G G  ++G+ VH + +K G  +D F + + + +Y K  
Sbjct: 136 SCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCG 195

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE 167
            LD+A   FD +  +  + W ++I GY  +   E  + +   M     K N+ T   +L+
Sbjct: 196 ILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLK 255

Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
           A + + D   G   HA  +K G   +VFV T+L+ MY       + E  F  ++ +++  
Sbjct: 256 ASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVS 315

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
            N +I  Y+  G+ E A  V+  L S   EP+ +TF  + S C  +  V EG Q+H  +V
Sbjct: 316 FNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSV 375

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           KFG+  ++SVGN+IV  Y K G ++ A   F++I+  N + W  +ISG+ ++G G KA+ 
Sbjct: 376 KFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALM 435

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
            F +        D    ++VI   S  + +E G  LH   +K G    + +G+A++D+Y+
Sbjct: 436 QFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYS 495

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           K G ++ A+ +      K    +N++++G+ +     E   ++LF +   +G+ P  VTF
Sbjct: 496 KCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKE--ALLLFQEMTSSGILPTAVTF 553

Query: 468 SRLLSLSASQACLV-RGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSID--GAFQIFK 523
             +L  + S A LV  GR+ +   +   G    +     ++ +  + G ++   AF +  
Sbjct: 554 VGIL-FACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSS 612

Query: 524 GISDRDIVSWNAMLSAYALH 543
             S    + W ++LSA  +H
Sbjct: 613 SFSKEPGI-WGSLLSACGVH 631


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/668 (31%), Positives = 370/668 (55%), Gaps = 29/668 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL++G+ VH  ++ SG + D F AN L+ +YAK +    +++LFD +  R+ ++W +L  
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y+        +G+  +M  S  K NE + S ++ AC+ L D   G+ IH + IK G++ 
Sbjct: 232 CYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           + F   +L+ MY   G   +A +VF  +   D+   N +I         E A        
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQAL------- 344

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                              E LG +  +QLH   +K  +  ++ V   +V MY K  + E
Sbjct: 345 -------------------ELLG-QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 384

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A   F+ + E++LI+W A+ISGY +     +A++ F+E    GI  + + L+T++   +
Sbjct: 385 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 444

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               + +  Q+HG ++K G+ SD+ +  +L+D Y K   ++ A  + +  +      F +
Sbjct: 445 GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTS 504

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++ + +      E+ + LF + +   ++PD    S LL+  A+ +   +G+ LH + +K
Sbjct: 505 MITAYAQ--YGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK 562

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G+  D+  GN+L+ MYAKCGSID A + F  +++R IVSW+AM+   A HG G+ AL L
Sbjct: 563 YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQL 622

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F +M +EG +P+ I+++ VL AC ++GL       F  +E+++G +P+ EH+ACM+DLLG
Sbjct: 623 FNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLG 682

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG+++EA+ L+N  PF  +  +W  L+  +++  + +    A++ L  LEP+ +G+ +L
Sbjct: 683 RAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVL 742

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           ++N+YA  G  +  A+VR  M D ++ KE G SWIE+  K++ F+   + H  S+EIY+K
Sbjct: 743 LANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAK 802

Query: 733 LDLLNDEM 740
           LD L+D M
Sbjct: 803 LDELSDLM 810



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 189/640 (29%), Positives = 315/640 (49%), Gaps = 50/640 (7%)

Query: 10  LQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISI 69
           L  PFK     P L + VP   FS +P++  A L  I   + +  ++ ++   +L+    
Sbjct: 17  LHLPFKPA---PKLIQTVP--QFSEDPQT-TAILNLIDKGNFTPTSVSYS---KLLSQCC 67

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
            +  L+ G  +HA + KSG  +D    N+LINLY+K      A+KL D       ++W++
Sbjct: 68  TTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSA 127

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI GY  +G     L    +M+    K NE T S +L+ACS+++D   G+Q+H   + SG
Sbjct: 128 LISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           FE +VFV  +L+ MY     F +++ +F  +  ++V   N +   Y +      A  +F 
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFY 247

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            ++ S  +PN+++ +++++ C        GK +HG  +K G   +    NA+V MY K G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              +A  +F+ I + +++SW A+I+G V   H  +A    LE L                
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQA----LELLG--------------- 348

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
                   ++  QLH   +K    SD+ +   LVD+Y+K   L+ ARM  +    K    
Sbjct: 349 --------QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIA 400

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NAI+SG+ +   D E   + LF +    G+  +  T S +L  +A    +   R +H  
Sbjct: 401 WNAIISGYSQYWEDME--ALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGL 458

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           S+K+G+ +D+ V N+LI  Y KC  ++ A +IF+  +  D+VS+ +M++AYA +G G+ A
Sbjct: 459 SVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEA 518

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA--CM 607
           L LF EM+     PD      +L AC      E G  L   I + YG   +L+ FA   +
Sbjct: 519 LKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK-YGF--VLDIFAGNSL 575

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           V++  + G + +A        FSE  L  R +VS S ++ 
Sbjct: 576 VNMYAKCGSIDDA-----GRAFSE--LTERGIVSWSAMIG 608



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 2/272 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K + G   + + + VH   +KSG  +D +  N+LI+ Y K + ++ A+++F+   +  
Sbjct: 439 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 498

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++TS+I  Y   G  E  L +  +M   E K +   CS +L AC+ L     G+Q+H 
Sbjct: 499 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 558

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K GF  ++F G SL++MY   G   +A   F  L  + +   + MI    + G    
Sbjct: 559 HILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQ 618

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVGNAIV 302
           A  +F  +L     PN  T  +V+  C     V E K     +   FG          ++
Sbjct: 619 ALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMI 678

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            + G+ G   EA  + + +  E N   W AL+
Sbjct: 679 DLLGRAGKINEAVELVNKMPFEANASVWGALL 710


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/636 (33%), Positives = 366/636 (57%), Gaps = 10/636 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+ G+ V  +++K G+  D F    +I+LYAK   +D A K F  M +R+ ++WT++I 
Sbjct: 263 ELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIIS 322

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE--QIHAFAIKSGF 190
           G++   D  S      +M +  EK N +T + +L AC+  E  +  E  Q+H++  K+GF
Sbjct: 323 GFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACT--EPVMIKEAVQLHSWIFKTGF 380

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGL-AYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             +  V ++LI+MY   G    +E VFR + + K++     MI  + ++G +  A  +F 
Sbjct: 381 YLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQ 440

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +L     P+ +  ++V+S+  ++L +  G+ +H   +K G+  +ISVG+++ TMY K G
Sbjct: 441 RMLQEGLRPDKFCSSSVLSI-IDSLSL--GRLIHCYILKIGLFTDISVGSSLFTMYSKCG 497

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             EE+  +F+ + +++ +SW ++I+G+    H  +A+  F E L   I  D   L   + 
Sbjct: 498 SLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALT 557

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS   +LE G ++HG+A++     +V +G ALV++Y+K G +  AR + D    K    
Sbjct: 558 ACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFS 617

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
            ++++SG+ +      ED ++LF + R+A +  D  T S ++   A    L  G  LHA 
Sbjct: 618 CSSLVSGYAQN--GYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHAC 675

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
             K G  A+V VG++L+TMY+KCGSID   ++F+ I   D++SW AM+ +YA HG G  A
Sbjct: 676 VTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEA 735

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L +++ M++EG  PD ++ +GVL AC ++G+ E G    N + + YG+ P   H+ACMVD
Sbjct: 736 LKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVD 795

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGR+GRL EA   IN+ P     LLW  L++  K+  + +   LA+KR+++LEP +AG+
Sbjct: 796 LLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGA 855

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
           ++ +SN+ A  G  ++  K+R+ M    + KE G S
Sbjct: 856 YVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWS 891



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 270/508 (53%), Gaps = 7/508 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           G   L+  + +HA  LK+   Q++TF  N+L+  Y K N +  A +LFD     + I+W 
Sbjct: 57  GRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWN 116

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
            LI G   +  +E      C M  S    N+ T   +L AC+ L   ++GE +++ A+K+
Sbjct: 117 ILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKN 176

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF +N +V   +I ++     F +A  VF+ +  ++V C N +I    K  E+ +A  +F
Sbjct: 177 GFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLF 236

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +    F PN +TF+++++ C     +E G+ + G  +K G   ++ VG AI+ +Y K 
Sbjct: 237 CQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKC 296

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              ++A + F  +  RN++SWT +ISG+V+      A + F E   +G   ++  + +V+
Sbjct: 297 RDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVL 356

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK-SARMLLDGFSCKYT 427
             C+    ++  +QLH +  K G+  D  + +AL+++Y+K G +  S R+  +  S K  
Sbjct: 357 TACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNL 416

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
           A +  ++S F +  +      + LF +    G+ PD    S +LS+  S   L  GR +H
Sbjct: 417 AMWAVMISAFAQ--SGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDS---LSLGRLIH 471

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            Y +K G   D+ VG++L TMY+KCGS++ ++ +F+ + D+D VSW +M++ ++ H   +
Sbjct: 472 CYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAE 531

Query: 548 GALLLFEEMKREGFAPDDISILGVLQAC 575
            A+ LF EM  E   PD +++   L AC
Sbjct: 532 QAVQLFREMLLEEIRPDQMTLTAALTAC 559



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 18/187 (9%)

Query: 463 DPVTFSRLLSLSASQACLVRG-RSLHAYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQ 520
           DP  F      + S  C +R  + LHA+ +KT    ++  + N+L+  Y K  S+  A +
Sbjct: 45  DPFHF--FSDYTKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALR 102

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F      +++SWN ++S    +   + +   F +M+  GF P+  +   VL AC   G 
Sbjct: 103 LFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGS 162

Query: 581 SEGGICLFNEIEQIYGLRPILEHF------ACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
              G       E +Y L      F      A M+DL  +     +A+ +       E+ +
Sbjct: 163 PLYG-------ELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDV-LCENVV 214

Query: 635 LWRTLVS 641
            W  ++S
Sbjct: 215 CWNAIIS 221


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/688 (31%), Positives = 383/688 (55%), Gaps = 12/688 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G ++ G  +H F+++SG   D +   +LI+ Y+K   ++ A+ +FD +  ++A+TWT++I
Sbjct: 143 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTII 202

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY   G     L +   M  +    + +  S +L ACS+LE    G+QIHA+ ++ G E
Sbjct: 203 AGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 262

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +V V   LI  Y      +    +F  +  K++     MI  Y +      A  +F  +
Sbjct: 263 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 322

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
               ++P+ +  T+V++ C     +E+G+Q+H   +K  +  +  V N ++ MY K  + 
Sbjct: 323 NRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLL 382

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +A+++FD ++E+N+IS+ A+I GY       +A+  F E   + +      L T +   
Sbjct: 383 IDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHE---MRVRLFPPSLLTFVSLL 439

Query: 372 SVCSNL---ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            V ++L   EL  Q+HG  IK G   D+  G+AL+D+Y+K   +K AR + +  + K   
Sbjct: 440 GVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV 499

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +NA+  G+ + +  + E+ + L+S  + +  +P+  TF+ L++ +++ A L  G+  H 
Sbjct: 500 VWNAMFFGYTQHL--ENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHN 557

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             +K G      V NAL+ MYAKCGSI+ A ++F     RD+V WN+M+S +A HG  + 
Sbjct: 558 QLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEE 617

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL +F EM +EG  P+ ++ + VL AC ++G  E G+  FN +   +G++P  EH+AC+V
Sbjct: 618 ALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVV 676

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
            LLGR+G+L EA   I   P   + ++WR+L+S  ++  N +    A++  +  +PKD+G
Sbjct: 677 SLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSG 736

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           S+IL+SN++A +GM  +  KVR  M+   + KE G SWIE+++K++ F+A    H E+ +
Sbjct: 737 SYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREA-D 795

Query: 729 IYSKLDLLNDEMKLK--VKDSSAFELQD 754
           I S LD+L   +K    V D++A  + D
Sbjct: 796 IGSVLDILIQHIKGAGYVPDATALLMND 823



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 180/588 (30%), Positives = 309/588 (52%), Gaps = 13/588 (2%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           ++  L+++SI    +   + +H  ++ SG Q+DTF AN LIN+ +K +R+D A+ +FD M
Sbjct: 29  EFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKM 88

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFG 178
             ++ ITW+S++  Y   G  E  L +  D+ R S E  NE   + ++ AC+ L     G
Sbjct: 89  PHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKG 148

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+H F ++SGF+ +V+VGTSLI  Y  +G   EA  VF  L+ K       +I  Y K 
Sbjct: 149 AQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKC 208

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G S ++  +F  +  ++  P+ Y  ++V+S C     +E GKQ+H   ++ G   ++SV 
Sbjct: 209 GRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV 268

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N ++  Y K    +   ++FD +  +N+ISWT +ISGY+++    +A+  F E   LG  
Sbjct: 269 NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWK 328

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D     +V+  C     LE G Q+H + IK    SD  +   L+D+YAK   L  A+ +
Sbjct: 329 PDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKV 388

Query: 419 LDGFSCKYTAEFNAILSGF--MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            D  + +    +NA++ G+   EK+++  E    LF + R+    P  +TF  LL +SAS
Sbjct: 389 FDVMAEQNVISYNAMIEGYSSQEKLSEALE----LFHEMRVRLFPPSLLTFVSLLGVSAS 444

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L   + +H   IK G + D+  G+ALI +Y+KC  +  A  +F+ ++++DIV WNAM
Sbjct: 445 LFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAM 504

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
              Y  H   + AL L+  ++     P++ +   ++ A         G    N++ ++ G
Sbjct: 505 FFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM-G 563

Query: 597 LR--PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
           L   P + +   +VD+  + G + EA  + NSS + +  + W +++S 
Sbjct: 564 LDFCPFVTN--ALVDMYAKCGSIEEARKMFNSSIWRDV-VCWNSMIST 608



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 167/325 (51%), Gaps = 9/325 (2%)

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
           +  P    F N++ +      +   K +HG  +  G+  +  + N ++ +  K    + A
Sbjct: 22  NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 81

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL----GICCDSSCLATVIDG 370
             +FD +  +NLI+W++++S Y + G+  +A+   + F+DL    G   +   LA+VI  
Sbjct: 82  RVVFDKMPHKNLITWSSMVSMYSQQGYSEEAL---MVFVDLQRKSGEHPNEFVLASVIRA 138

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+    +E G QLHGF ++ G+  DV +GT+L+D Y+K G+++ AR++ D  S K    +
Sbjct: 139 CTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTW 198

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
             I++G+ +         + LF+Q R   + PD    S +LS  +    L  G+ +HAY 
Sbjct: 199 TTIIAGYTK--CGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV 256

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           ++ G   DV V N LI  Y KC  +    ++F  +  ++I+SW  M+S Y  +     A+
Sbjct: 257 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAM 316

Query: 551 LLFEEMKREGFAPDDISILGVLQAC 575
            LF EM R G+ PD  +   VL +C
Sbjct: 317 KLFGEMNRLGWKPDGFACTSVLTSC 341


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/678 (33%), Positives = 374/678 (55%), Gaps = 16/678 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  +G+ VH   LKSG   D     +L+++Y K    +  + +FD M +++ ++WTSL+ 
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS 178

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF--GEQIHAFAIKSGF 190
           GY  +G  + V+ +   M       N  T + +L A  L ++ I   G Q+HA  +K+GF
Sbjct: 179 GYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGA--LADESIIEGGVQVHAMIVKNGF 236

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E   FV  +LI MY  S    +AE VF  +  +D    N MI  Y   G     F +F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  +  + +   F   + +C +   +   KQLH   VK G      +  A++  Y K   
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 311 SEEAERMFD-AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            +EA ++F  A +  N+++WTA+I G+V++ +  KA++ F +    G+  +    +TV+ 
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           G        L  QLH   IK  Y     + TAL+D Y K G++  +  +      K    
Sbjct: 417 G----KPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVA 472

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSLHA 488
           ++A+L+G  +    D E  M +F Q    G++P+  TFS +++  +S A  V  G+ +HA
Sbjct: 473 WSAMLTGLAQ--TRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            ++K+G +  + V +AL+TMY+K G+I+ A ++F    +RDIVSWN+M++ Y  HG  K 
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKK 590

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL +F+ M+ +G   DD++ +GVL AC ++GL E G   FN + + Y +    EH++CMV
Sbjct: 591 ALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMV 650

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DL  RAG   +AM++IN  PF  SP +WRTL++  ++  N +   LA+++L+ L+P DA 
Sbjct: 651 DLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAV 710

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            ++L+SN++A  G  +E A VR  M++ ++ KEAGCSWIEI +++  F+A    HP S+ 
Sbjct: 711 GYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDL 770

Query: 729 IYSKLDLLNDEMKLKVKD 746
           +Y+KL    +E+ +K+KD
Sbjct: 771 VYAKL----EELSIKLKD 784



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 238/512 (46%), Gaps = 13/512 (2%)

Query: 66  KISIGSGDLKLG-QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           KI++G+G L+     +  FL   G     F  +  +   +  +R   A +LFD   ++  
Sbjct: 15  KITVGNGRLQSSIHHIKHFLHPHG-----FLYHQSLPFISLPSRPRYAHQLFDETPLKDI 69

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
             +  L+  +  +      L +  D++ S    +  T S  L+ C +L D++ G Q+H  
Sbjct: 70  SHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQ 129

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           ++KSGF  +V VGTSL+ MY  +  F +   +F  +  K+V     ++  Y + G ++  
Sbjct: 130 SLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEV 189

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            H+   +      PN +TF  V+    +   +E G Q+H + VK G      V NA++ M
Sbjct: 190 IHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICM 249

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K  M  +AE +FD++  R+ ++W  +I GY   G   +    F      G+    +  
Sbjct: 250 YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVF 309

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
            T +  CS    L    QLH   +K+GY     + TAL+  Y+K   +  A  L      
Sbjct: 310 CTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADA 369

Query: 425 KY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    + A++ GF++   ++ +  + LF Q    G+ P+  T+S +L+   S       
Sbjct: 370 AHNVVTWTAMIGGFVQN--NNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL---- 423

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             LHA  IK  Y     V  AL+  Y K G++  + ++F  I  +DIV+W+AML+  A  
Sbjct: 424 SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQT 483

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
              + A+ +F ++ +EG  P++ +   V+ AC
Sbjct: 484 RDSEKAMEVFIQLVKEGVKPNEYTFSSVINAC 515



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 2/173 (1%)

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           + A  L D    K  + +N +L  F     D E   + LF     +G+  D +T S  L 
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDRE--ALHLFKDLHSSGLGVDGLTLSCALK 112

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
           +       V GR +H  S+K+G+  DV VG +L+ MY K    +    IF  +  +++VS
Sbjct: 113 VCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVS 172

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
           W ++LS YA +GL    + L  +M+ EG  P+  +   VL A     + EGG+
Sbjct: 173 WTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGV 225



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 9/160 (5%)

Query: 68  SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
           S  +  ++ G+ +HA  +KSG  N    ++ L+ +Y+K   ++ A+K+F     R  ++W
Sbjct: 516 SSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSW 575

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLE--DRIFGEQIH 182
            S+I GY   GD +  L +   M       ++ T   +L AC+   L+E  ++ F   I 
Sbjct: 576 NSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
            + I    E+     + ++ +Y  +G F +A ++  G+ +
Sbjct: 636 DYHIDKKXEHY----SCMVDLYSRAGMFDKAMDIINGMPF 671


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/644 (32%), Positives = 373/644 (57%), Gaps = 17/644 (2%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  ++W++LI  Y ++      +    DM       NE+  + +  ACS  E+   G+ I
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64

Query: 182 HAFAIKSG-FENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
             F +K+G FE++V VG +LI M+   +G    A  VF  +  ++V     MI  + + G
Sbjct: 65  FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
            S  A  +F+ ++ S + P+ +T + V+S C E   +  G+Q H L +K G+  ++ VG 
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184

Query: 300 AIVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK-AINGFLEFLDL 355
           ++V MY K    G  ++A ++FD +   N++SWTA+I+GYV+SG   + AI  FLE +  
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            +  +    ++V+  C+  S++ LG Q++   +K    S   +G +L+ +Y++ G++++A
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R   D    K    +N I++ + + +  + E+   LF++   AG   +  TF+ LLS ++
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSL--NSEEAFELFNEIEGAGTGVNAFTFASLLSGAS 362

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S   + +G  +H+  +K+G+ +++ + NALI+MY++CG+I+ AFQ+F  + D +++SW +
Sbjct: 363 SIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTS 422

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++ +A HG    AL  F +M   G +P++++ + VL AC + GL   G+  F  ++  +
Sbjct: 423 MITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEH 482

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           G+ P +EH+AC+VDLLGR+G L EAM L+NS PF    L+ RT +   ++  N      A
Sbjct: 483 GIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHA 542

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           ++ +L+ +P D  ++IL+SN++A  G  +E A++R  M +  L+KEAGCSWIE+++K+H 
Sbjct: 543 AEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHK 602

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKLKVKD-----SSAFELQD 754
           F      HP+++EIY +L    D++ LK+K+     S+ F L D
Sbjct: 603 FYVGDTSHPQAQEIYDEL----DQLALKIKELGYIPSTDFVLHD 642



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 190/363 (52%), Gaps = 7/363 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF---NRLDVAQKLFDGMLVRSAITWT 128
           G L LG+  H  ++KSG   D     +L+++YAK      +D A+K+FD M V + ++WT
Sbjct: 159 GLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWT 218

Query: 129 SLIKGYLDDG--DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           ++I GY+  G  D E++  +  +M + + K N  T S +L+AC+ L D   GEQ++A  +
Sbjct: 219 AIITGYVQSGGCDREAI-ELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVV 277

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K    +   VG SLISMY   G    A   F  L  K++   N ++  Y K+  SE AF 
Sbjct: 278 KMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFE 337

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F  +  +    N +TF +++S       + +G+Q+H   +K G    + + NA+++MY 
Sbjct: 338 LFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYS 397

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           + G  E A ++F+ + + N+ISWT++I+G+ + G   +A+  F + L+ G+  +      
Sbjct: 398 RCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIA 457

Query: 367 VIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           V+  CS    +  GL+      ++HG +  +     +VD+  + G L+ A  L++    K
Sbjct: 458 VLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFK 517

Query: 426 YTA 428
             A
Sbjct: 518 ADA 520



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 239/488 (48%), Gaps = 13/488 (2%)

Query: 73  DLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFN-RLDVAQKLFDGMLVRSAITWTSL 130
           ++ LG+ +  FLLK+G  ++D      LI+++ K N  L+ A K+FD M  R+ +TWT +
Sbjct: 57  NISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLM 116

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  +   G     + +  DM  S    +  T S ++ AC+ +     G Q H   +KSG 
Sbjct: 117 ITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGL 176

Query: 191 ENNVFVGTSLISMY---FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFH 246
           + +V VG SL+ MY      G   +A  VF  +   +V     +I  Y ++G  +  A  
Sbjct: 177 DLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIE 236

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F+ ++    +PN +TF++V+  C     +  G+Q++ L VK  +     VGN++++MY 
Sbjct: 237 LFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYS 296

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           + G  E A + FD + E+NL+S+  +++ Y +S +  +A   F E    G   ++   A+
Sbjct: 297 RCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFAS 356

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++ G S    +  G Q+H   +K G+ S++ +  AL+ +Y++ G++++A  + +      
Sbjct: 357 LLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGN 416

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RS 485
              + ++++GF +         +  F +   AG+ P+ VT+  +LS  +    +  G + 
Sbjct: 417 VISWTSMITGFAKH--GFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKH 474

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHG 544
             +  ++ G    +     ++ +  + G ++ A ++   +  + D +     L A  +HG
Sbjct: 475 FKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHG 534

Query: 545 ---LGKGA 549
              LGK A
Sbjct: 535 NMDLGKHA 542



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 139/260 (53%), Gaps = 8/260 (3%)

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
           ++R+L+SW+ALIS Y  +    +AI+ F + L+ G   +  C   V   CS   N+ LG 
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 382 QLHGFAIKHGYL-SDVRLGTALVDIYAKG-GDLKSARMLLDGFSCKYTAEFNAILSGFME 439
            + GF +K GY  SDV +G AL+D++ KG GDL+SA  + D    +    +  +++ F +
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
                  D + LF    L+G  PD  T S ++S  A    L  GR  H   +K+G   DV
Sbjct: 123 --LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180

Query: 500 IVGNALITMYAKC---GSIDGAFQIFKGISDRDIVSWNAMLSAYALH-GLGKGALLLFEE 555
            VG +L+ MYAKC   GS+D A ++F  +   +++SW A+++ Y    G  + A+ LF E
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLE 240

Query: 556 MKREGFAPDDISILGVLQAC 575
           M +    P+  +   VL+AC
Sbjct: 241 MVQGQVKPNHFTFSSVLKAC 260


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/681 (32%), Positives = 360/681 (52%), Gaps = 8/681 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L +I     D   G+ +H  +LK G+  D F  N L+N Y + N L  A KLFD M   +
Sbjct: 41  LQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTN 100

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I++ +L +GY  D  +   L     +++   + N    + +L+    ++       +HA
Sbjct: 101 TISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHA 160

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
              K G   + FVGT+LI  Y   G    A +VF  +  KD+     M+  Y +    E 
Sbjct: 161 CVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEE 220

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNA 300
           +  +F  +    ++PN++T +  +  C   LG+E    GK +HG A+K     ++ VG A
Sbjct: 221 SLQLFNQMRIMGYKPNNFTISGALKSC---LGLEAFNVGKSVHGCALKGCYDHDLFVGIA 277

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G   +A+R+F+ + + +LI W+ +I+ Y +S    +A++ FL      +  +
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +   A+V+  C+   +L+LG Q+H   +K G  S+V +  A++D+YAK G+++++  L +
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFE 397

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               +    +N I+ G+++    D E  M LF+      M+P  VT+S +L  SAS A L
Sbjct: 398 ELPDRNDVTWNTIIVGYVQ--LGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAAL 455

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G  +H+ +IKT Y  D +V N+LI MYAKCG I+ A   F  ++ RD VSWNAM+  Y
Sbjct: 456 EPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGY 515

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           ++HG+   AL LF+ M+     P+ ++ +GVL AC  +GL   G   F  + + Y ++P 
Sbjct: 516 SMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPC 575

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+ CMV LLGR GR  EAM LI    +  S ++WR L+    +        + ++ +L
Sbjct: 576 IEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVL 635

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           ++EP D  + +L+SNMYA  G  D  A VR  M   ++ KE G SW+E    +H+F    
Sbjct: 636 EMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGD 695

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
             HP+ + I + L+ LN + +
Sbjct: 696 TSHPDIKLICAMLEWLNKKTR 716



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 58/110 (52%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  +++ S     L+ G  +H+  +K+    DT  AN+LI++YAK  R++ A+  FD M 
Sbjct: 442 YSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN 501

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
            R  ++W ++I GY   G     L +   M  ++ K N+ T   +L ACS
Sbjct: 502 KRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACS 551


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 224/682 (32%), Positives = 366/682 (53%), Gaps = 7/682 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++  + S  LK G+ +H  ++  G QND F    LIN Y   +  D A+ +FD M    
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68

Query: 124 AIT-WTSLIKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
            I+ W  L+ GY  +  Y   L +   + +    K + +T   + +AC  L   + G+ I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   IK+G   ++ VG+SL+ MY     F +A  +F  +  KDV C N +I  Y ++G  
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A   F  +    FEPN  T T  IS C   L +  G ++H   +  G + +  + +A+
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V MYGK G  E A  +F+ + ++ +++W ++ISGY   G     I  F    + G+    
Sbjct: 249 VDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTL 308

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           + L+++I  CS  + L  G  +HG+ I++    DV + ++L+D+Y K G ++ A  +   
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKL 368

Query: 422 FSCKYTAEFNAILSGFMEKIADDEE-DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                   +N ++SG+   +A+ +  + + LFS+ R + +E D +TF+ +L+  +  A L
Sbjct: 369 IPKSKVVSWNVMISGY---VAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAAL 425

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            +G+ +H   I+     + +V  AL+ MYAKCG++D AF +FK +  RD+VSW +M++AY
Sbjct: 426 EKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG   GAL LF EM +    PD ++ L +L AC ++GL + G   FN++  +YG+ P 
Sbjct: 486 GSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPR 545

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSP-FSESPLLWRTLVSVSKLMANSKFSILASKRL 659
           +EH++C++DLLGRAGRL EA  ++  +P   +   L  TL S  +L  N       ++ L
Sbjct: 546 VEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTL 605

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           +D +P D+ ++IL+SNMYA     DE   VR+ M +L L K  GCSWIEI+ K+  F   
Sbjct: 606 IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVE 665

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
              H   E ++  L  L+D M+
Sbjct: 666 DNSHLHLELVFKCLSYLSDHME 687



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 226/491 (46%), Gaps = 15/491 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P + K   G     LG+ +H  L+K+G   D    ++L+ +Y K N  + A  LF+ M 
Sbjct: 109 YPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMP 168

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +    W ++I  Y   G+++  L     M R   + N  T +  + +C+ L D   G +
Sbjct: 169 EKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGME 228

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   I SGF  + F+ ++L+ MY   G    A  +F  +  K V   N MI  Y   G+
Sbjct: 229 IHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGD 288

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
                 +F  + +   +P   T +++I VC  +  + EGK +HG  ++  +  ++ V ++
Sbjct: 289 IISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSS 348

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G  E AE++F  I +  ++SW  +ISGYV  G   +A+  F E     +  D
Sbjct: 349 LMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESD 408

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +    +V+  CS  + LE G ++H   I+    ++  +  AL+D+YAK G +  A  +  
Sbjct: 409 AITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFK 468

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS-----A 475
               +    + ++++ +           + LF++   + ++PD V F  +LS        
Sbjct: 469 CLPKRDLVSWTSMITAYGSH--GHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLV 526

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG---ISDRDIVS 532
            + C    + ++ Y    G    V   + LI +  + G +  A++I +    I D D+  
Sbjct: 527 DEGCYYFNQMINVY----GIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRD-DVEL 581

Query: 533 WNAMLSAYALH 543
            + + SA  LH
Sbjct: 582 LSTLFSACRLH 592


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/683 (31%), Positives = 372/683 (54%), Gaps = 2/683 (0%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           + +P +VK     G + LG+ VH      G   D F  + LI +YA    L  A+++FDG
Sbjct: 147 HTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDG 206

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R  + W  ++ GY+  G   S + +  DM  S  + N  T +  L   +   D  FG
Sbjct: 207 MAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFG 266

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+H  A+K G E+ V V  +L+SMY    C  +   +F  +   D+   N MI    + 
Sbjct: 267 VQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQN 326

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G  + A  +F  +  S   P+  T  +++    +  G  +GK+LHG  V+  V  ++ + 
Sbjct: 327 GFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLV 386

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           +A+V +Y K      A+ ++D+    +++  + +ISGYV +G   +A+  F   L+ GI 
Sbjct: 387 SALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIR 446

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            ++  +A+V+  C+  + ++LG +LH +A+K+ Y     + +AL+D+YAK G L  +  +
Sbjct: 447 PNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYI 506

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               S K    +N+++S F +    + E+ + LF +  + G++   VT S +LS  AS  
Sbjct: 507 FSKISAKDEVTWNSMISSFAQN--GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLP 564

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            +  G+ +H   IK    AD+   +ALI MY KCG+++ A ++F+ + +++ VSWN++++
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           +Y  +GL K ++ L   M+ EGF  D ++ L ++ AC ++G  + G+ LF  + + Y + 
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P +EHFACMVDL  RAG+L +AM LI   PF     +W  L+   ++  N + + +AS+ 
Sbjct: 685 PRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQE 744

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L  L+P ++G ++L+SN+ A  G  D  +KVR  M D ++ K  G SW+++++  H FVA
Sbjct: 745 LFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVA 804

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
           + K HP+SE+IY  L  +  E++
Sbjct: 805 ADKSHPDSEDIYMSLKSILLELR 827



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 175/584 (29%), Positives = 291/584 (49%), Gaps = 20/584 (3%)

Query: 69  IGSGDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGM---LVRSA 124
           +    L LG  VH   + +G    DT     L+ +Y    R   A  +F  +       A
Sbjct: 50  VSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACA 109

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYR--SEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + W  LI+G    GDY S L     M+   S    + HT   ++++C+ L     G  +H
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             A   G + ++FVG++LI MY + G   +A  VF G+A +D    N M+  Y KAG   
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVS 229

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  +F  + +S  EPN  T    +SV      +  G QLH LAVK+G+  E++V N +V
Sbjct: 230 SAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLV 289

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
           +MY K    ++  ++F  +   +L++W  +ISG V++G   +A+  F +    GI  DS 
Sbjct: 290 SMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            L +++   +  +    G +LHG+ +++    DV L +ALVDIY K   ++ A+ + D  
Sbjct: 350 TLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSS 409

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                   + ++SG++  +    ++ + +F      G+ P+ V  + +L   AS A +  
Sbjct: 410 KAIDVVIGSTMISGYV--LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKL 467

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ LH+Y++K  Y     V +AL+ MYAKCG +D +  IF  IS +D V+WN+M+S++A 
Sbjct: 468 GQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQ 527

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIEQIYGL 597
           +G  + AL LF EM  EG    +++I  VL AC     IY G    G+ +   I      
Sbjct: 528 NGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPI------ 581

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           R  L   + ++D+ G+ G L  A  +  S P  ++ + W ++++
Sbjct: 582 RADLFAESALIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIA 624



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHG-YLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           L  V+ GC   S+L LGLQ+HG A+  G + +D  L T LV +Y      + A  +    
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 423 SCKYTA---EFNAILSGFMEKIADDEEDVMVLFSQQ--RLAGMEPDPVTFSRLLSLSASQ 477
                A    +N ++ G    +A D    ++ + +     +   PD  TF  ++   A+ 
Sbjct: 102 PRGAAACALPWNWLIRGL--TMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAAL 159

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +  GR +H  +   G   D+ VG+ALI MYA  G +  A Q+F G+++RD V WN M+
Sbjct: 160 GAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPD 564
             Y   G    A+ LF +M+  G  P+
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPN 246


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/679 (32%), Positives = 357/679 (52%), Gaps = 2/679 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+K   G  DL LG  +HA  +K+G + D    + L+++Y K   L+ A + F GM  R+
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERN 201

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +++W + I G + +  Y   L +   M R     ++   + +  +C+ +       Q+HA
Sbjct: 202 SVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHA 261

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK+ F  +  VGT+++ +Y  +    +A   F  L    V+  N M++   + G    
Sbjct: 262 HAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAE 321

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +  S    +  + + V S C E  G  +G Q+H LA+K G   ++ V NAI+ 
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILD 381

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           +YGK     EA  +F  + +R+ +SW A+I+   ++      I    E L  G+  D   
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFT 441

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
             +V+  C+   +LE G  +HG AIK G   D  + + +VD+Y K G +  A+ L D   
Sbjct: 442 YGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIG 501

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +N+I+SGF   +    E+    FS+    G++PD  T++ +L   A+ A +  G
Sbjct: 502 GQELVSWNSIISGF--SLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELG 559

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +H   IK     D  + + L+ MYAKCG++  +  +F+     D VSWNAM+  YALH
Sbjct: 560 KQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALH 619

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G  AL +FE M++    P+  + + VL+AC + GL + G   F  +   Y L P LEH
Sbjct: 620 GQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEH 679

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           FACMVD+LGR+    EA+  I S P     ++W+TL+S+ K+  + + +  A+  +L L+
Sbjct: 680 FACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLD 739

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P D+  +IL+SN+YA  G   + ++ R  M   RL KE GCSWIE+ S++H F+A  K H
Sbjct: 740 PDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVH 799

Query: 724 PESEEIYSKLDLLNDEMKL 742
           P S E+Y  L+ L  EMKL
Sbjct: 800 PRSREVYEMLNNLIVEMKL 818



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 158/596 (26%), Positives = 269/596 (45%), Gaps = 40/596 (6%)

Query: 61  WPQLVKISIGSGD--LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           +  L ++  G+G   L  GQA HA +L SG    TF +N L+ +YA+      A+ +FD 
Sbjct: 5   FSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDV 64

Query: 119 MLVRSAITWTSLIKGYLDDGD-------------------------------YESVLGIA 147
           M  R  ++W +++  Y   GD                               +   +G++
Sbjct: 65  MPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLS 124

Query: 148 CDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
            +M R     +  T +V+L+AC  LED   G QIHA A+K+G E +V  G++L+ MY   
Sbjct: 125 VEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKC 184

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
               +A   F G+  ++       I    +  +      +FV +       +   + +V 
Sbjct: 185 RSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVF 244

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
             C     +   +QLH  A+K     +  VG AIV +Y K     +A R F ++    + 
Sbjct: 245 RSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQ 304

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           +  A++ G VR+G G +A+  F      GI  D   L+ V   C+       GLQ+H  A
Sbjct: 305 ACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLA 364

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           IK G+  DV +  A++D+Y K   L  A ++      + +  +NAI++   +   +  ED
Sbjct: 365 IKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQN--ECYED 422

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
            +   ++    GMEPD  T+  +L   A    L  G  +H  +IK+G   D  V + ++ 
Sbjct: 423 TIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVD 482

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY KCG I  A ++   I  +++VSWN+++S ++L+   + A   F EM   G  PD  +
Sbjct: 483 MYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFT 542

Query: 568 ILGVLQACIYSGLSEGGICLFNEI--EQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
              VL  C      E G  +  +I  +++ G   I    + +VD+  + G + +++
Sbjct: 543 YATVLDTCANLATIELGKQIHGQIIKQEMLGDEYI---SSTLVDMYAKCGNMPDSL 595



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 238/522 (45%), Gaps = 41/522 (7%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+  HA  + SGF    FV   L+ MY   G    A  VF  + ++D    N M+  Y  
Sbjct: 23  GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAH 82

Query: 238 AGESEMAFHVF-------------------------------VHLLSSDFEPNDYTFTNV 266
           AG++  A  +F                               V +      P+  T   +
Sbjct: 83  AGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVL 142

Query: 267 ISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           +  C   E+L +  G Q+H +AVK G+  ++  G+A+V MYGK    E+A R F  + ER
Sbjct: 143 LKACGGLEDLAL--GVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGER 200

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           N +SW A I+G V++    + +  F++   LG+       A+V   C+  + L    QLH
Sbjct: 201 NSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLH 260

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
             AIK+ + +D  +GTA+VD+YAK   L  AR              NA++ G +      
Sbjct: 261 AHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGA 320

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
           E   + LF     +G+  D V+ S + S  A     ++G  +H  +IK+G+  DV V NA
Sbjct: 321 E--ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNA 378

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           ++ +Y KC ++  A+ +F+ +  RD VSWNA+++A   +   +  +    EM R G  PD
Sbjct: 379 ILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPD 438

Query: 565 DISILGVLQACI-YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           D +   VL+AC     L  G +     I+   GL   +   + +VD+  + G ++EA  L
Sbjct: 439 DFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVS--STVVDMYCKCGMITEAQKL 496

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
            +     +  + W +++S   L   S+ +      +LD+  K
Sbjct: 497 -HDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVK 537



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 40/196 (20%)

Query: 466 TFSRLLSL--SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           TFS L  L   A ++ L  G++ HA  + +G+     V N L+ MYA+CG    A  +F 
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFE----------------------------- 554
            +  RD VSWN ML+AYA  G    A  LF                              
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 555 --EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI---YGLRPILEHFACMVD 609
             EM R G APD  ++  +L+AC   GL +  + L  +I  +    GL   +   + +VD
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKAC--GGLED--LALGVQIHAVAVKTGLEMDVRAGSALVD 179

Query: 610 LLGRAGRLSEAMNLIN 625
           + G+   L +A+   +
Sbjct: 180 MYGKCRSLEDALRFFH 195


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/672 (32%), Positives = 363/672 (54%), Gaps = 6/672 (0%)

Query: 74  LKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           L+ GQ   A  +       +T   N +I+ Y K   L  A+ LFD M  R+ +TWT L+ 
Sbjct: 55  LRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMG 114

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y  +  ++    +   M RS    +  T + +L  C+    +    Q+HAFA+K GF+ 
Sbjct: 115 WYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 174

Query: 193 NVF--VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           N+F  V   L+  Y        A  +F  +  KD    N +I  Y K G    A H+F+ 
Sbjct: 175 NLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLK 234

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  S  +P+D+TF+ V+           G+QLHGL+V  G  R+ SVGN I+  Y KH  
Sbjct: 235 MRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDR 294

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             E   +F+ + E + +S+  +IS Y ++    +++N F E   +G    +   AT++  
Sbjct: 295 VLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSI 354

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            +  S+L++G Q+H  AI     S + +G +LVD+YAK      A ++    S + T  +
Sbjct: 355 AANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSW 414

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
            A++SG+++K        + LF++ R A +  D  TF+ +L  SA  A L+ G+ LHA+ 
Sbjct: 415 TALISGYVQKGLHGAG--LKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFI 472

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           I++G   +V  G+ L+ MYAKCGSI  A Q+F+ + DR+ VSWNA++SAYA +G G+ A+
Sbjct: 473 IRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAI 532

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
             F +M + G  PD +SILGVL AC + G  E G   F  +  IYG+ P  +H+ACM+DL
Sbjct: 533 GAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDL 592

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGS 669
           LGR GR +EA  L++  PF    ++W ++++  ++  N   +  A+++L  +E  +DA +
Sbjct: 593 LGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAA 652

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++ +SN+YA  G  +    V+  M +  + K    SW+E++ K+H F ++ + HP  +EI
Sbjct: 653 YVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 712

Query: 730 YSKLDLLNDEMK 741
             K++ L  E++
Sbjct: 713 VKKINELTTEIE 724



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 163/358 (45%), Gaps = 1/358 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K  +G  D  LGQ +H   + +G   D    N +++ Y+K +R+   + LF+ M    
Sbjct: 250 VLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELD 309

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++  +I  Y     YE  L +  +M            + +L   + L     G Q+H 
Sbjct: 310 FVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHC 369

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AI +  ++ + VG SL+ MY     F EAE +F+ L+ +       +I  Y + G    
Sbjct: 370 QAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGA 429

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +F  +  ++   +  TF  V+        +  GKQLH   ++ G +  +  G+ +V 
Sbjct: 430 GLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 489

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  ++A ++F+ + +RN +SW ALIS Y  +G G  AI  F + +  G+  DS  
Sbjct: 490 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVS 549

Query: 364 LATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +  V+  CS C  +E G +     +  +G     +    ++D+  + G    A  L+D
Sbjct: 550 ILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 607



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 142/274 (51%), Gaps = 2/274 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ I+     L++G+ VH   + + + +     N+L+++YAK    D A+ +F  +  RS
Sbjct: 351 MLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRS 410

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++WT+LI GY+  G + + L +   M  +  + ++ T + +L+A +     + G+Q+HA
Sbjct: 411 TVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHA 470

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           F I+SG   NVF G+ L+ MY   G  ++A  VF  +  ++    N +I  Y   G+ E 
Sbjct: 471 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEA 530

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIV 302
           A   F  ++ S  +P+  +   V+  C     VE+G +    ++  +G+  +      ++
Sbjct: 531 AIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACML 590

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
            + G++G   EAE++ D +  E + I W+++++ 
Sbjct: 591 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 624


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/669 (33%), Positives = 349/669 (52%), Gaps = 5/669 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK G+ +H  +LKS  Q D    N+++N+Y K   L  A+K FD M +RS ++WT +I G
Sbjct: 96  LKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISG 155

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G     + +   M RS    ++ T   I++AC +  D   G Q+H   IKSG++++
Sbjct: 156 YSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHH 215

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +    +LISMY   G    A +VF  ++ KD+     MI  + + G    A ++F  +  
Sbjct: 216 LIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFR 275

Query: 254 SD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              ++PN++ F +V S C   L  E G+Q+ G+  KFG+ R +  G ++  MY K G   
Sbjct: 276 QGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLP 335

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A+R F  I   +L+SW A+I+    S    +AI  F + + +G+  D      ++  C 
Sbjct: 336 SAKRAFYQIESPDLVSWNAIIAALANSD-VNEAIYFFCQMIHMGLMPDDITFLNLLCACG 394

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT-AEFN 431
               L  G+Q+H + IK G      +  +L+ +Y K  +L  A  +    S       +N
Sbjct: 395 SPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWN 454

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           AILS   +     E     LF     +  +PD +T + +L   A    L  G  +H +S+
Sbjct: 455 AILSACSQHKQPGE--AFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSV 512

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K+G   DV V N LI MYAKCG +  A  +F    + DIVSW++++  YA  GLG+ AL 
Sbjct: 513 KSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALN 572

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF  M+  G  P++++ LGVL AC + GL E G  L+N +E   G+ P  EH +CMVDLL
Sbjct: 573 LFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLL 632

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG L EA N I  + F     +W+TL++  K   N   +  A++ +L L+P ++ + +
Sbjct: 633 ARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALV 692

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+SN++A  G   E A++R  M  + + K  G SWIE+  ++H F +    HP+   IY+
Sbjct: 693 LLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYT 752

Query: 732 KLDLLNDEM 740
            L+ L  +M
Sbjct: 753 MLEDLWLQM 761



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 206/413 (49%), Gaps = 5/413 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           ++ AC+ +    +G++IH   +KS  + ++ +   +++MY   G  ++A   F  +  + 
Sbjct: 86  LILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRS 145

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     MI  Y++ G+   A  +++ +L S + P+  TF ++I  C     ++ G QLHG
Sbjct: 146 VVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHG 205

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             +K G    +   NA+++MY K G    A  +F  IS ++LISW ++I+G+ + G+  +
Sbjct: 206 HVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIE 265

Query: 345 AINGFLEFLDLGICCDSS-CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
           A+  F +    G+   +     +V   C      E G Q+ G   K G   +V  G +L 
Sbjct: 266 ALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLC 325

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D+YAK G L SA+             +NAI++        D  + +  F Q    G+ PD
Sbjct: 326 DMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANS---DVNEAIYFFCQMIHMGLMPD 382

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
            +TF  LL    S   L +G  +H+Y IK G      V N+L+TMY KC ++  AF +FK
Sbjct: 383 DITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFK 442

Query: 524 GISDR-DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            IS+  ++VSWNA+LSA + H     A  LF+ M      PD+I+I  +L  C
Sbjct: 443 DISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTC 495



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 230/485 (47%), Gaps = 7/485 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    +GD+ LG  +H  ++KSG  +     N LI++Y KF ++  A  +F  +  + 
Sbjct: 187 IIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKD 246

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGEQIH 182
            I+W S+I G+   G     L +  DM+R    + NE     +  AC  L    FG QI 
Sbjct: 247 LISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQ 306

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
               K G   NVF G SL  MY   G    A+  F  +   D+   N +I     +  +E
Sbjct: 307 GMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDVNE 366

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A + F  ++     P+D TF N++  C   + + +G Q+H   +K G+ +  +V N+++
Sbjct: 367 -AIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLL 425

Query: 303 TMYGKHGMSEEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           TMY K     +A  +F  ISE  NL+SW A++S   +    G+A   F   L      D+
Sbjct: 426 TMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDN 485

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             + T++  C+   +LE+G Q+H F++K G + DV +   L+D+YAK G LK AR + D 
Sbjct: 486 ITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDS 545

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
                   +++++ G+ +     E   + LF   R  G++P+ VT+  +LS  +    + 
Sbjct: 546 TQNPDIVSWSSLIVGYAQFGLGQE--ALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVE 603

Query: 482 RGRSLH-AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
            G  L+    I+ G        + ++ + A+ G +  A    K    D DI  W  +L++
Sbjct: 604 EGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLAS 663

Query: 540 YALHG 544
              HG
Sbjct: 664 CKTHG 668



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 189/399 (47%), Gaps = 17/399 (4%)

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           HL +S  +    T+ N+I  C     ++ GK++H   +K     ++ + N I+ MYGK G
Sbjct: 70  HLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCG 129

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             ++A + FD +  R+++SWT +ISGY ++G    AI  +++ L  G   D     ++I 
Sbjct: 130 SLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIK 189

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C +  +++LG QLHG  IK GY   +    AL+ +Y K G +  A  +    S K    
Sbjct: 190 ACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLIS 249

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGM-EPDPVTFSRLLSLSASQACLVRGRSLHA 488
           + ++++GF +     E + + LF      G+ +P+   F  + S   S      GR +  
Sbjct: 250 WASMITGFTQ--LGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQG 307

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
              K G   +V  G +L  MYAK G +  A + F  I   D+VSWNA+++A A   + + 
Sbjct: 308 MCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDVNE- 366

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPILE 602
           A+  F +M   G  PDDI+ L +L AC       G     N+  QI+      GL  +  
Sbjct: 367 AIYFFCQMIHMGLMPDDITFLNLLCAC-------GSPMTLNQGMQIHSYIIKMGLDKVAA 419

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               ++ +  +   L +A N+      + + + W  ++S
Sbjct: 420 VCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILS 458


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/733 (31%), Positives = 391/733 (53%), Gaps = 24/733 (3%)

Query: 31  TFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAF-LLKSGS 89
           +F  NP   +A+L SI + + +    ++     L ++S      K GQ   A  L     
Sbjct: 39  SFPHNPCKFMAFLRSIHTTTAASYESIYQTNQLLNQLS------KSGQVNDARKLFDKMP 92

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           Q D +  N +I+ Y    RL  A++LFDG   +S+ITW+S+I GY   G       +   
Sbjct: 93  QKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRS 152

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M     K ++ T   +L  CS L     GE IH F +K+GFE NVFV T L+ MY    C
Sbjct: 153 MRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKC 212

Query: 210 FREAENVFRGLAY--KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
             EAE +F+GL +  K+      M+  Y + G+   A   F ++ +   E N YTF  ++
Sbjct: 213 VSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTIL 272

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
           + C   L    G+Q+HG  VK G    + V +A+V MY K G  + A+ M + + + +++
Sbjct: 273 TACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVV 332

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS-NLELGLQLHGF 386
           SW +L+ G+VR G   +A+  F       +  D     +V++ C V S N +    +HG 
Sbjct: 333 SWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPK---SVHGL 389

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
            IK G+ +   +  ALVD+YAK GD+  A  + +    K    + ++++G+ +   +  E
Sbjct: 390 IIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQN--NSHE 447

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
           + + +F   R+ G+ PD    + +LS  A    L  G+ +H   IK+G      V N+L+
Sbjct: 448 ESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLV 507

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MYAKCG +D A  IF  +  +D+++W A++  YA +G G+ +L  ++ M   G  PD I
Sbjct: 508 AMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFI 567

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + +G+L AC ++GL + G   F ++ ++YG++P  EH+ACM+DL GR+G+L EA  L++ 
Sbjct: 568 TFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQ 627

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
                   +W++L+S  ++  N + +  A+  L +LEP +A  ++++SNMY+     ++ 
Sbjct: 628 MDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDV 687

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKD 746
           AK+R  M    + KE GCSW+EI+S+++ F++  + HP   EIY+K+    DE+ L++K+
Sbjct: 688 AKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKI----DEIILRIKE 743

Query: 747 SS-----AFELQD 754
           +      +F L D
Sbjct: 744 AGYVPDMSFSLHD 756


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/683 (31%), Positives = 372/683 (54%), Gaps = 2/683 (0%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           + +P +VK     G + LG+ VH      G   D F  + LI +YA    L  A+++FDG
Sbjct: 147 HTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDG 206

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R  + W  ++ GY+  G   S + +  DM  S  + N  T +  L   +   D  FG
Sbjct: 207 MAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFG 266

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+H  A+K G E+ V V  +L+SMY    C  +   +F  +   D+   N MI    + 
Sbjct: 267 VQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQN 326

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G  + A  +F  +  S   P+  T  +++    +  G  +GK+LHG  V+  V  ++ + 
Sbjct: 327 GFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLV 386

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           +A+V +Y K      A+ ++D+    +++  + +ISGYV +G   +A+  F   L+ GI 
Sbjct: 387 SALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIR 446

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            ++  +A+V+  C+  + ++LG +LH +A+K+ Y     + +AL+D+YAK G L  +  +
Sbjct: 447 PNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYI 506

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               S K    +N+++S F +    + E+ + LF +  + G++   VT S +LS  AS  
Sbjct: 507 FSKISAKDEVTWNSMISSFAQN--GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLP 564

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            +  G+ +H   IK    AD+   +ALI MY KCG+++ A ++F+ + +++ VSWN++++
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           +Y  +GL K ++ L   M+ EGF  D ++ L ++ AC ++G  + G+ LF  + + Y + 
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P +EHFACMVDL  RAG+L +AM LI   PF     +W  L+   ++  N + + +AS+ 
Sbjct: 685 PRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQE 744

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L  L+P ++G ++L+SN+ A  G  D  +KVR  M D ++ K  G SW+++++  H FVA
Sbjct: 745 LFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVA 804

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
           + K HP+SE+IY  L  +  E++
Sbjct: 805 ADKSHPDSEDIYMSLKSILLELR 827



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 175/584 (29%), Positives = 291/584 (49%), Gaps = 20/584 (3%)

Query: 69  IGSGDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGM---LVRSA 124
           +    L LG  VH   + +G    DT     L+ +Y    R   A  +F  +       A
Sbjct: 50  VSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACA 109

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYR--SEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + W  LI+G    GDY S L     M+   S    + HT   ++++C+ L     G  +H
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             A   G + ++FVG++LI MY + G   +A  VF G+A +D    N M+  Y KAG   
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVS 229

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  +F  + +S  EPN  T    +SV      +  G QLH LAVK+G+  E++V N +V
Sbjct: 230 SAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLV 289

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
           +MY K    ++  ++F  +   +L++W  +ISG V++G   +A+  F +    GI  DS 
Sbjct: 290 SMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            L +++   +  +    G +LHG+ +++    DV L +ALVDIY K   ++ A+ + D  
Sbjct: 350 TLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSS 409

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                   + ++SG++  +    ++ + +F      G+ P+ V  + +L   AS A +  
Sbjct: 410 KAIDVVIGSTMISGYV--LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKL 467

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ LH+Y++K  Y     V +AL+ MYAKCG +D +  IF  IS +D V+WN+M+S++A 
Sbjct: 468 GQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQ 527

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIEQIYGL 597
           +G  + AL LF EM  EG    +++I  VL AC     IY G    G+ +   I      
Sbjct: 528 NGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPI------ 581

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           R  L   + ++D+ G+ G L  A  +  S P  ++ + W ++++
Sbjct: 582 RADLFAESALIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIA 624



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHG-YLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           L  V+ GC   S+L LGLQ+HG A+  G + +D  L T LV +Y      + A  +    
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 423 SCKYTA---EFNAILSGFMEKIADDEEDVMVLFSQQ--RLAGMEPDPVTFSRLLSLSASQ 477
                A    +N ++ G    +A D    ++ + +     +   PD  TF  ++   A+ 
Sbjct: 102 PRGAAACALPWNWLIRGL--TMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAAL 159

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +  GR +H  +   G   D+ VG+ALI MYA  G +  A Q+F G+++RD V WN M+
Sbjct: 160 GAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPD 564
             Y   G    A+ LF +M+  G  P+
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPN 246


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/674 (34%), Positives = 372/674 (55%), Gaps = 10/674 (1%)

Query: 74  LKLGQAVHAFLLKSGSQND-TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           LK GQ +HA ++K    +   + ANNLI  YAK   L  A+ +F+ +  ++ +++  LI 
Sbjct: 23  LKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIH 82

Query: 133 GYLDDGDYES--VLGIACDMYRSEEKFNEHTCSVILEACSL-LEDRIFGEQIHAFAIKSG 189
           G   +G   S  VL +   M  +    + HT   +  A +L L       Q+H   IK+ 
Sbjct: 83  GLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTA 142

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             ++VFVG+SL++ Y   GC  EA  +F  +  +++     MI  Y     ++ A  VF 
Sbjct: 143 SIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFG 202

Query: 250 HLLSSDFEPNDYTFTNVIS--VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
            +   +   N++ FT+V+S  VC E   V+ GKQ+H + VK GV+  +SV NA+VTMY K
Sbjct: 203 LMRLVEGNLNEFVFTSVLSALVCPEF--VDSGKQVHCVVVKNGVLEFVSVLNALVTMYAK 260

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G    +  +F+  S++N I+W+ALI+GY ++G   KA+  F +    G       L  V
Sbjct: 261 CGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGV 320

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  CS  + +E G Q HG+ +K GY + +   TALVD+YAK G    AR   D       
Sbjct: 321 LKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDL 380

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             + +I++G+++      E+ + ++ + ++  + P+ +T + +L   ++ A L +G+ +H
Sbjct: 381 VLWTSIIAGYVQN--GKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIH 438

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           A +IK G   ++ + +AL TMYAKCGS++    IF+ +  RDIVSWNAM+S  + +G G+
Sbjct: 439 ARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGR 498

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL LFEEM+ EG  PD I+ + VL AC + G+ + G   FN +   + L P +EH+ACM
Sbjct: 499 EALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACM 558

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VD+L RAG+L+EA   I S+       LWR L+   +   N +    A ++L++L  +++
Sbjct: 559 VDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRES 618

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
            +++L+S++Y   G L +  +VR  M    + KE GCSWIE+ S +H FV   + HP+ E
Sbjct: 619 SAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQIE 678

Query: 728 EIYSKLDLLNDEMK 741
           EI   +  L   MK
Sbjct: 679 EIQGAIWRLRKHMK 692


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/711 (31%), Positives = 374/711 (52%), Gaps = 9/711 (1%)

Query: 34  PNPKSQVAYLCSISSVS-----CSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLK 86
           PN       LC I+  S      S  +  FN +    L++  I +GD   G+ +H  ++K
Sbjct: 13  PNHCKSNTALCIITQRSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIK 72

Query: 87  SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGI 146
            G+  D F  N L+N Y K++ L  A KLFD M  R+ +++ +LI+GY     +   +G+
Sbjct: 73  KGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGL 132

Query: 147 ACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH 206
              +     + N    S +L+     E    G  +HA   K GF+++ FVGT+LI  Y  
Sbjct: 133 FSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSV 192

Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV 266
            G    A  VF  + YKD+     M+  Y +    E +  +F  +    F+PN++TF +V
Sbjct: 193 CGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASV 252

Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           +  C        GK +HG A K   + E+ VG  ++ +Y K G  ++A ++F+ + + ++
Sbjct: 253 LKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDV 312

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           I W+ +I+ Y +S    +AI  F       +  +   LA+++  C+   +L+LG Q+H  
Sbjct: 313 IPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCH 372

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
            +K G   +V +  AL+D+YAK G ++++  L           +N ++ G+++  A + E
Sbjct: 373 VVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQ--AGNGE 430

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
             ++LF       ++   VT+S +L   A  A L  G  +H+ S+KT Y  + +VGNALI
Sbjct: 431 KALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALI 490

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MYAKCG+I  A  +F  + + D VSWNAM+S Y++HGL   AL  FE M      PD +
Sbjct: 491 DMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKV 550

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + +G+L AC  +GL + G   F  + + Y + P  EH+ CMV LLGR+G L +A  L++ 
Sbjct: 551 TFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHE 610

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            PF  S ++WR L+S   +  + +   ++++R+L++EP+D  + +L+SN+YA        
Sbjct: 611 IPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNV 670

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           A +RT+M    + KE G SWIE   ++H+F      HP+++ I   L+ LN
Sbjct: 671 ASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLN 721


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 227/704 (32%), Positives = 366/704 (51%), Gaps = 44/704 (6%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VH  L + G + D +  N+LIN Y+KF  +  A+++F  M +R  +TW+S+I  Y  
Sbjct: 75  GKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAG 134

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIFGEQIHAFAIKSGFENN 193
           +            M  +  + N  T   IL+AC   S+LE    G +IH      G E +
Sbjct: 135 NNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEK---GRKIHTIVKAMGMETD 191

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V V T+LI+MY   G    A  VF  +  ++V     +I    +  +   AF ++  +L 
Sbjct: 192 VAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ 251

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +   PN  TF ++++ C     +  G+++H    + G+  ++ V NA++TMY K    +E
Sbjct: 252 AGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQE 311

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGK-AINGFLEFLDL----GICCDSSCLATVI 368
           A  +FD +S+R++ISW+A+I+GY +SG+  K +I+   + L+     G+  +     +++
Sbjct: 312 AREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSIL 371

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA--------------------- 407
             C+    LE G Q+H    K G+  D  L TA+ ++YA                     
Sbjct: 372 RACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVV 431

Query: 408 ----------KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
                     K GDL SA  +      +    +N +++G+ +    D   V  L S  + 
Sbjct: 432 AWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQN--GDIVKVFELLSSMKA 489

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
            G +PD VT   +L    + A L RG+ +HA ++K G  +D +V  +LI MY+KCG +  
Sbjct: 490 EGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAE 549

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F  +S+RD V+WNAML+ Y  HG G  A+ LF+ M +E  +P++I++  V+ AC  
Sbjct: 550 ARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSR 609

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           +GL + G  +F  +++ + + P  +H+ CMVDLLGRAGRL EA   I S P      +W 
Sbjct: 610 AGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWH 669

Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
            L+   K   N + +  A+  +L+LEP  A  +I +SN+YA  G  D++ KVR  M+D  
Sbjct: 670 ALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRG 729

Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           L K+ G S IEID ++H FVA    HPE + I+++L+ L  EMK
Sbjct: 730 LKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMK 773



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 241/503 (47%), Gaps = 37/503 (7%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           N +T   ++E C+       G+ +H    + G E ++++G SLI+ Y        AE VF
Sbjct: 55  NSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVF 114

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
           R +  +DV   + MI  Y        AF  F  +  ++ EPN  TF +++  C     +E
Sbjct: 115 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILE 174

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           +G+++H +    G+  +++V  A++TMY K G    A  +F  ++ERN++SWTA+I    
Sbjct: 175 KGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANA 234

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           +     +A   + + L  GI  ++    ++++ C+    L  G ++H    + G  +D+ 
Sbjct: 235 QHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI 294

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE---DVMVLFSQ 454
           +  AL+ +Y K   ++ AR + D  S +    ++A+++G+ +    D+E   +V  L  +
Sbjct: 295 VANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLER 354

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            R  G+ P+ VTF  +L    +   L +GR +HA   K G+  D  +  A+  MYAKCGS
Sbjct: 355 MRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGS 414

Query: 515 IDGAFQIFKGISD-------------------------------RDIVSWNAMLSAYALH 543
           I  A Q+F  +++                               R++VSWN M++ YA +
Sbjct: 415 IYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQN 474

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIEQIYGLRPILE 602
           G       L   MK EGF PD ++++ +L+AC   +GL  G +     ++   GL     
Sbjct: 475 GDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVK--LGLESDTV 532

Query: 603 HFACMVDLLGRAGRLSEAMNLIN 625
               ++ +  + G+++EA  + +
Sbjct: 533 VATSLIGMYSKCGQVAEARTVFD 555



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 207/412 (50%), Gaps = 11/412 (2%)

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           KAG    A  +   +       N  T+  VI  C +    E+GK +H    + GV  +I 
Sbjct: 33  KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           +GN+++  Y K      AE++F  ++ R++++W+++I+ Y  + H  KA + F    D  
Sbjct: 93  LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +     +++  C+  S LE G ++H      G  +DV + TAL+ +Y+K G++  A 
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            +    + +    + AI+    +    +E     L+ Q   AG+ P+ VTF  LL+   +
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNE--AFELYEQMLQAGISPNAVTFVSLLNSCNT 270

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L RGR +H++  + G   D+IV NALITMY KC S+  A +IF  +S RD++SW+AM
Sbjct: 271 PEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAM 330

Query: 537 LSAYALHGLGKG-----ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           ++ YA  G            L E M+REG  P+ ++ + +L+AC   G  E G  +  E+
Sbjct: 331 IAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL 390

Query: 592 EQI-YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            ++ + L   L+    + ++  + G + EA  +  S   +++ + W + +S+
Sbjct: 391 SKVGFELDRSLQ--TAIFNMYAKCGSIYEAEQVF-SKMANKNVVAWTSFLSM 439



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 231/515 (44%), Gaps = 54/515 (10%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +H  +   G + D   A  LI +Y+K   + VA ++F  M  R+ ++WT++I+ 
Sbjct: 173 LEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQA 232

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
                       +   M ++    N  T   +L +C+  E    G +IH+   + G E +
Sbjct: 233 NAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETD 292

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-----AFHVF 248
           + V  +LI+MY      +EA  +F  ++ +DV   + MI  Y ++G  +       F + 
Sbjct: 293 MIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLL 352

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +      PN  TF +++  C  +  +E+G+Q+H    K G   + S+  AI  MY K 
Sbjct: 353 ERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKC 412

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGH-----------------------GGKA 345
           G   EAE++F  ++ +N+++WT+ +S Y++ G                         G A
Sbjct: 413 GSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYA 472

Query: 346 ING-FLEFLDL-------GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
            NG  ++  +L       G   D   + T+++ C   + LE G  +H  A+K G  SD  
Sbjct: 473 QNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTV 532

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           + T+L+ +Y+K G +  AR + D  S + T  +NA+L+G+ +    D  + + LF +   
Sbjct: 533 VATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQH--GDGLEAVDLFKRMLK 590

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSL--------HAYSIKTGYAADVIVGNALITMY 509
             + P+ +T + ++S  +    +  GR +             K  Y         ++ + 
Sbjct: 591 ERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYG-------CMVDLL 643

Query: 510 AKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            + G +  A +  + +  + DI  W+A+L A   H
Sbjct: 644 GRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSH 678



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 132/303 (43%), Gaps = 33/303 (10%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +++     G L+ G+ +HA L K G + D      + N+YAK   +  A+++F  M  ++
Sbjct: 370 ILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKN 429

Query: 124 AITWTSL-------------------------------IKGYLDDGDYESVLGIACDMYR 152
            + WTS                                I GY  +GD   V  +   M  
Sbjct: 430 VVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKA 489

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
              + +  T   ILEAC  L     G+ +HA A+K G E++  V TSLI MY   G   E
Sbjct: 490 EGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAE 549

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF  ++ +D    N M+  Y + G+   A  +F  +L     PN+ T T VIS C  
Sbjct: 550 ARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSR 609

Query: 273 NLGVEEGKQLHGLAVK-FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWT 330
              V+EG+++  +  + F +         +V + G+ G  +EAE    ++  E ++  W 
Sbjct: 610 AGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWH 669

Query: 331 ALI 333
           AL+
Sbjct: 670 ALL 672


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 215/694 (30%), Positives = 381/694 (54%), Gaps = 32/694 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG  +H  +++ G   D   A+ L+++YAK  R   + ++F G+  +++++W+++I 
Sbjct: 153 DTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIA 212

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFN----EHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           G + +    ++L +A   ++  +K N    +   + +L +C+ L +   G Q+HA A+KS
Sbjct: 213 GCVQN----NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 268

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            F  +  V T+ + MY      ++A+ +F      + +  N MI  Y++      A  +F
Sbjct: 269 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 328

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             L+SS    ++ + + V   C    G+ EG Q++GLA+K  +  ++ V NA + MYGK 
Sbjct: 329 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKC 388

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
               EA R+FD +  R+ +SW A+I+ + ++G G + +  F+  L   I  D     +++
Sbjct: 389 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 448

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML---------- 418
             C+  S L  G+++H   +K G  S+  +G +L+D+Y+K G ++ A  +          
Sbjct: 449 KACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 507

Query: 419 ------LDGFSCKYTAE----FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
                 L+    K   E    +N+I+SG++ K  +  ED  +LF++    G+ PD  T++
Sbjct: 508 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMK--EQSEDAQMLFTRMMEMGITPDKFTYA 565

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L   A+ A    G+ +HA  IK    +DV + + L+ MY+KCG +  +  +F+    R
Sbjct: 566 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 625

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D V+WNAM+  YA HG G+ A+ LFE M  E   P+ ++ + +L+AC + GL + G+  F
Sbjct: 626 DFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYF 685

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +++ YGL P L H++ MVD+LG++G++  A+ LI   PF    ++WRTL+ V  +  N
Sbjct: 686 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 745

Query: 649 S-KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           + + +  A+  LL L+P+D+ ++ L+SN+YA  GM ++ + +R  M   +L KE GCSW+
Sbjct: 746 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 805

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           E+  +LH F+   K HP  EEIY +L L+  EMK
Sbjct: 806 ELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 839



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 173/673 (25%), Positives = 299/673 (44%), Gaps = 71/673 (10%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTF-------------------------------EANNLI 100
           G L+LG+  HA ++ SG +  TF                                 N +I
Sbjct: 20  GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMI 79

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
           N Y+K N +  A   F+ M VR  ++W S++ GYL +G+    + +  DM R   +F+  
Sbjct: 80  NGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR 139

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T ++IL+ CS LED   G QIH   ++ G + +V   ++L+ MY     F E+  VF+G+
Sbjct: 140 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 199

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             K+    + +I    +     +A   F  +   +   +   + +V+  C     +  G 
Sbjct: 200 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 259

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           QLH  A+K     +  V  A + MY K    ++A+ +FD     N  S+ A+I+GY +  
Sbjct: 260 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE 319

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
           HG KA+  F   +  G+  D   L+ V   C++   L  GLQ++G AIK     DV +  
Sbjct: 320 HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVAN 379

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           A +D+Y K   L  A  + D    +    +NAI++   E+     E + +  S  R + +
Sbjct: 380 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH-EQNGKGYETLFLFVSMLR-SRI 437

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           EPD  TF  +L  + +   L  G  +H+  +K+G A++  VG +LI MY+KCG I+ A +
Sbjct: 438 EPDEFTFGSILK-ACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 496

Query: 521 IFKGISDRD--------------------IVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           I      R                      VSWN+++S Y +    + A +LF  M   G
Sbjct: 497 IHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 556

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG------LRPILEHFACMVDLLGRA 614
             PD  +   VL  C  + L+  G+      +QI+       L+  +   + +VD+  + 
Sbjct: 557 ITPDKFTYATVLDTC--ANLASAGLG-----KQIHAQVIKKELQSDVYICSTLVDMYSKC 609

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL--DLEPKDAGSFIL 672
           G L ++  L+         + W  ++         + +I   +R++  +++P    +FI 
Sbjct: 610 GDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV-TFIS 667

Query: 673 VSNMYAGQGMLDE 685
           +    A  G++D+
Sbjct: 668 ILRACAHMGLIDK 680



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 248/524 (47%), Gaps = 59/524 (11%)

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG-- 290
           +E  K G  E+      H++ S F P  +    ++ V Y N      +     ++ F   
Sbjct: 14  VECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQV-YTN-----SRDFVSASMVFDKM 67

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
            +R++   N ++  Y K     +A   F+ +  R+++SW +++SGY+++G   K+I  F+
Sbjct: 68  PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 127

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
           +    GI  D    A ++  CS   +  LG+Q+HG  ++ G  +DV   +AL+D+YAKG 
Sbjct: 128 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 187

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
               +  +  G   K +  ++AI++G ++   +     +  F + +          ++ +
Sbjct: 188 RFVESLRVFQGIPEKNSVSWSAIIAGCVQN--NLLSLALKFFKEMQKVNAGVSQSIYASV 245

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           L   A+ + L  G  LHA+++K+ +AAD IV  A + MYAKC ++  A  +F    + + 
Sbjct: 246 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 305

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFN 589
            S+NAM++ Y+    G  ALLLF  +   G   D+IS+ GV +AC +  GLSEG      
Sbjct: 306 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG------ 359

Query: 590 EIEQIYGL--RPILEHFACM----VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
              QIYGL  +  L    C+    +D+ G+   L+EA  + +     ++ + W  +++  
Sbjct: 360 --LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA-VSWNAIIAAH 416

Query: 644 KLMANSK--------FSILASKRLLDLEPKDAGSFILVSNMYA------GQGMLDEAAKV 689
           +   N K         S+L S+    +EP +   F   S + A      G GM   ++ V
Sbjct: 417 E--QNGKGYETLFLFVSMLRSR----IEPDE---FTFGSILKACTGGSLGYGMEIHSSIV 467

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           ++ M     +   GCS I++ SK            E+E+I+S+ 
Sbjct: 468 KSGMAS---NSSVGCSLIDMYSKCGMI-------EEAEKIHSRF 501


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 215/694 (30%), Positives = 381/694 (54%), Gaps = 32/694 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG  +H  +++ G   D   A+ L+++YAK  R   + ++F G+  +++++W+++I 
Sbjct: 195 DTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIA 254

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFN----EHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           G + +    ++L +A   ++  +K N    +   + +L +C+ L +   G Q+HA A+KS
Sbjct: 255 GCVQN----NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 310

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            F  +  V T+ + MY      ++A+ +F      + +  N MI  Y++      A  +F
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 370

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             L+SS    ++ + + V   C    G+ EG Q++GLA+K  +  ++ V NA + MYGK 
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKC 430

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
               EA R+FD +  R+ +SW A+I+ + ++G G + +  F+  L   I  D     +++
Sbjct: 431 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML---------- 418
             C+  S L  G+++H   +K G  S+  +G +L+D+Y+K G ++ A  +          
Sbjct: 491 KACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549

Query: 419 ------LDGFSCKYTAE----FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
                 L+    K   E    +N+I+SG++ K  +  ED  +LF++    G+ PD  T++
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMK--EQSEDAQMLFTRMMEMGITPDKFTYA 607

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L   A+ A    G+ +HA  IK    +DV + + L+ MY+KCG +  +  +F+    R
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D V+WNAM+  YA HG G+ A+ LFE M  E   P+ ++ + +L+AC + GL + G+  F
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYF 727

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +++ YGL P L H++ MVD+LG++G++  A+ LI   PF    ++WRTL+ V  +  N
Sbjct: 728 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 787

Query: 649 S-KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           + + +  A+  LL L+P+D+ ++ L+SN+YA  GM ++ + +R  M   +L KE GCSW+
Sbjct: 788 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           E+  +LH F+   K HP  EEIY +L L+  EMK
Sbjct: 848 ELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 178/703 (25%), Positives = 312/703 (44%), Gaps = 78/703 (11%)

Query: 42  YLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTF------- 94
           +L  ++SVS +  + +F +  +        G L+LG+  HA ++ SG +  TF       
Sbjct: 39  FLNQVNSVSTTNFSFVFKECAK-------QGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91

Query: 95  ------------------------EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
                                     N +IN Y+K N +  A   F+ M VR  ++W S+
Sbjct: 92  VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           + GYL +G+    + +  DM R   +F+  T ++IL+ CS LED   G QIH   ++ G 
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + +V   ++L+ MY     F E+  VF+G+  K+    + +I    +     +A   F  
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +   +   +   + +V+  C     +  G QLH  A+K     +  V  A + MY K   
Sbjct: 272 MQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDN 331

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            ++A+ +FD     N  S+ A+I+GY +  HG KA+  F   +  G+  D   L+ V   
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C++   L  GLQ++G AIK     DV +  A +D+Y K   L  A  + D    +    +
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NAI++   E+     E + +  S  R + +EPD  TF  +L  + +   L  G  +H+  
Sbjct: 452 NAIIAAH-EQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILK-ACTGGSLGYGMEIHSSI 508

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD--------------------I 530
           +K+G A++  VG +LI MY+KCG I+ A +I      R                      
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC 568

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           VSWN+++S Y +    + A +LF  M   G  PD  +   VL  C  + L+  G+     
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC--ANLASAGLG---- 622

Query: 591 IEQIYG------LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
            +QI+       L+  +   + +VD+  + G L ++  L+         + W  ++    
Sbjct: 623 -KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYA 680

Query: 645 LMANSKFSILASKRLL--DLEPKDAGSFILVSNMYAGQGMLDE 685
                + +I   +R++  +++P    +FI +    A  G++D+
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHV-TFISILRACAHMGLIDK 722


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/675 (33%), Positives = 365/675 (54%), Gaps = 16/675 (2%)

Query: 76  LGQAVHAFLLKSGSQN-DTFEANNLINLYAKFNRLDVAQKLFDGML-VRSAITWTSLIKG 133
           LG+A+H  LL +   + D   AN+L+ +Y+K   +  A+++FDGM  +R  ++WT++   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED-RIFGEQIHAFAIKSGF-E 191
              +G  +  L +  +M  S  + N  T      AC   E  R  G  +  FAIK+GF  
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +V VG +LI M+  +G    A  VF GL  + V     MI  Y + G +  A  +F+ +
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           L   FEP+ YT ++++S C E      G+QLH L ++ G+V +  V   +V MY K  M 
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300

Query: 312 EE---AERMFDAISERNLISWTALISGYVR-SGHGGKAINGFLEFLDLGICCDSSCLATV 367
           +    A ++F  +   N++SWTALISGYV+  G    A+    E L+  I  +    +++
Sbjct: 301 QSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSL 360

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C+  S+ + G Q+H   +K    +   +G ALV +YA+ G ++ AR   D       
Sbjct: 361 LKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQL----- 415

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +   L      I +         SQ     +     TF+ LLS +A+     +G+ LH
Sbjct: 416 --YERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLH 473

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLG 546
           A SIKTG+ +D  + N+L++MY++CG +D A + F  + D  +++SW +++SA A HG  
Sbjct: 474 ALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHA 533

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           + AL LF +M   G  P+D++ + VL AC + GL + G   F  +++ + L P +EH+AC
Sbjct: 534 ERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYAC 593

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           MVDLL R+G + EA+  IN  P     L+W+TL+   +   N +   +A++ ++DLEP+D
Sbjct: 594 MVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQD 653

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
              ++L+SN+YA  G+ DE A++R+ M    LSKE G SW+ + + +H F A    HP +
Sbjct: 654 PAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRA 713

Query: 727 EEIYSKLDLLNDEMK 741
           +EIY+KL +L  E+K
Sbjct: 714 QEIYAKLAVLIREIK 728


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/671 (32%), Positives = 368/671 (54%), Gaps = 6/671 (0%)

Query: 74   LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            L  G  VHA  LK G  ++ +  ++L+++YAK  +++ A+K+FD +  ++ + W +++ G
Sbjct: 343  LDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGG 402

Query: 134  YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            Y+ +G    V+ +  +M       ++ T S IL AC+ L+    G Q+H+  IK+ F +N
Sbjct: 403  YVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASN 462

Query: 194  VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            +FVG +L+ MY  SG   +A   F  +  +D    N +I+ Y +  +   AFH+F  +  
Sbjct: 463  LFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNL 522

Query: 254  SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
                P++ +  +++S C    G+E+GKQ+H L+VK G   ++  G++++ MY K G  + 
Sbjct: 523  LGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDS 582

Query: 314  AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
            A ++   + ER+++S  ALI+GY +  +  +A+N F + L  GI       A+++D C  
Sbjct: 583  AHKILACMPERSVVSMNALIAGYAQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACHE 641

Query: 374  CSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-FN 431
               L LG Q+H   +K G  L D  LG +L+ +Y        A +L   FS   +A  + 
Sbjct: 642  QQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWT 701

Query: 432  AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            A++SG  +   D     + L+ + R   + PD  TF   L   A  + +  G   H+   
Sbjct: 702  AMISGLSQN--DCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIF 759

Query: 492  KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGLGKGAL 550
             TG+ +D +  +AL+ MYAKCG +  + Q+FK +S  +D++SWN+M+  +A +G  + AL
Sbjct: 760  HTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDAL 819

Query: 551  LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
             +F+EMK+    PDD++ LGVL AC +SG    G  +F+ +  +YG++P  +H ACMVDL
Sbjct: 820  RVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDL 879

Query: 611  LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
            LGR G L EA   IN   F     +W T++   ++  +      A+++L++LEP+++  +
Sbjct: 880  LGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPY 939

Query: 671  ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
            +L+SN+YA  G  DE   +R  M +  + K  GCSWI +  + + FVA  K H  + EI 
Sbjct: 940  VLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEID 999

Query: 731  SKLDLLNDEMK 741
            + L  L   M+
Sbjct: 1000 AILKDLTPLMR 1010



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 170/598 (28%), Positives = 288/598 (48%), Gaps = 22/598 (3%)

Query: 57  LFNDWPQLVKISIGS---GDLKLG---QAVHAF--LLKSGSQNDTFEANNLINLYAKFNR 108
           +F+   +L K+S  S   G +K+G   +AV  F  + K G + D      +IN Y    R
Sbjct: 217 IFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGR 276

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           LD A  LF  M  R+ + W  +I G+   G     +    +M ++  K    T   +L A
Sbjct: 277 LDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSA 336

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
            + L    FG  +HA A+K G  +NV+VG+SL+SMY   G    A+ VF  L  ++V   
Sbjct: 337 IASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLW 396

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N M+  Y + G +     +F ++ S  F P+D+T+++++S C     ++ G QLH + +K
Sbjct: 397 NAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIK 456

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
                 + VGNA+V MY K G  E+A + F+ I  R+ +SW  +I GYV+     +A + 
Sbjct: 457 NKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHL 516

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F     LGI  D   LA+++  C+    LE G Q+H  ++K G  + +  G++L+D+YAK
Sbjct: 517 FRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAK 576

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G + SA  +L     +     NA+++G+ +    + E  + LF    + G+    +TF+
Sbjct: 577 CGAIDSAHKILACMPERSVVSMNALIAGYAQI---NLEQAVNLFRDMLVEGINSTEITFA 633

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAA-DVIVGNALITMYAKCGSIDGAFQIFKGISD 527
            LL     Q  L  GR +H+  +K G    D  +G +L+ MY        A  +F   S+
Sbjct: 634 SLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSN 693

Query: 528 -RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGI 585
            +  V W AM+S  + +     AL L++EM+     PD  + +  L+AC + S + +G  
Sbjct: 694 PKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDG-- 751

Query: 586 CLFNEIEQIY---GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
               E   +    G        + +VD+  + G +  +M +       +  + W +++
Sbjct: 752 ---TETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMI 806



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 178/623 (28%), Positives = 291/623 (46%), Gaps = 57/623 (9%)

Query: 28  PINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKS 87
           P +T  P   + +   C   S      +L F++ PQ  ++S  S   K+   +HA  LK 
Sbjct: 35  PSHTLKPRIYTHILQNCLQKSKQVKTHSL-FDEIPQ--RLSQFSTTNKI---IHAQSLKL 88

Query: 88  GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIA 147
           G  +     N +++LYAK   +D A++ F  +  +  + W S++  +   G    V+   
Sbjct: 89  GFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYF 148

Query: 148 CDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
             ++ S    NE T +++L +C+ LE    G Q+H   +K GFE+  +   +LI MY   
Sbjct: 149 GLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKC 208

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
               +A ++F G    D      MI  Y K G  E A  VF  +     EP+   F  VI
Sbjct: 209 NFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVI 268

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
                                          NA V +    G  + A  +F  +  RN++
Sbjct: 269 -------------------------------NAYVDL----GRLDNASDLFSRMPNRNVV 293

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           +W  +ISG+ + G+G +AI  F      GI    S L +V+   +  + L+ GL +H  A
Sbjct: 294 AWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEA 353

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           +K G  S+V +G++LV +YAK G +++A+ + D  + +    +NA+L G+++    +E  
Sbjct: 354 LKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANE-- 411

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
           VM LF   +  G  PD  T+S +LS  A    L  G  LH+  IK  +A+++ VGNAL+ 
Sbjct: 412 VMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVD 471

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MYAK G+++ A Q F+ I +RD VSWN ++  Y        A  LF  M   G  PD++S
Sbjct: 472 MYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVS 531

Query: 568 ILGVLQACI-YSGLSEGGI--CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
           +  +L AC    GL +G    CL  +     G    L   + ++D+  + G +  A  ++
Sbjct: 532 LASILSACASVRGLEQGKQVHCLSVKT----GQETKLYSGSSLIDMYAKCGAIDSAHKIL 587

Query: 625 NSSPFSESPLLWRTLVSVSKLMA 647
              P        R++VS++ L+A
Sbjct: 588 ACMPE-------RSVVSMNALIA 603



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 146/319 (45%), Gaps = 15/319 (4%)

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H  ++K G+ S   LG  +VD+YAK  D+  A         K    +N+ILS  M    
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILS--MHSKQ 138

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
                V+  F     +G+ P+  TF+ +LS  A    +  GR +H   +K G+ +     
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
            ALI MYAKC  +  A  IF G  + D VSW +M+  Y   GL + A+ +F+EM++ G  
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258

Query: 563 PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM- 621
           PD ++ + V+ A +  G  +    LF+ +      R ++  +  M+    + G   EA+ 
Sbjct: 259 PDQVAFVTVINAYVDLGRLDNASDLFSRMPN----RNVVA-WNLMISGHAKGGYGVEAIE 313

Query: 622 ---NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD--LEPKDAGSFILVSNM 676
              N+  +   S    L   L +++ L A   F +L     L   L         LVS M
Sbjct: 314 FFQNMRKAGIKSTRSTLGSVLSAIASLAA-LDFGLLVHAEALKQGLHSNVYVGSSLVS-M 371

Query: 677 YAGQGMLDEAAKVRTTMND 695
           YA  G ++ A KV  T+N+
Sbjct: 372 YAKCGKMEAAKKVFDTLNE 390


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/678 (31%), Positives = 360/678 (53%), Gaps = 7/678 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           LVK  +  GDL   +     L       + F  N +I  Y K   L  A+ LFD M  R+
Sbjct: 107 LVKSFLQRGDLNGARK----LFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRT 162

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           A+TWT LI GY  +  +    G+  +M R     +  + + +L   +  +      Q+H+
Sbjct: 163 AVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHS 222

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             IK G+++ + V  SL+  Y  +     A  +F  +  +D    N ++  Y+K G +  
Sbjct: 223 HVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNRE 282

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A ++F  +    + P ++TF  +++   +   +E G+Q+HG  VK   V  + V NA++ 
Sbjct: 283 AINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLD 342

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y KH    EA ++F  + E + IS+  L++ Y  +G   +++  F E    G    +  
Sbjct: 343 FYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFP 402

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            AT++   ++  NL++G Q+H   I    +S++ +G +LVD+YAK G+   A  +    +
Sbjct: 403 FATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLA 462

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            + +  + A++S +++K     ED + LF + + A +  D  T++ ++   AS A L  G
Sbjct: 463 IQSSVPWTAMISSYVQK--GLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLG 520

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + LH++ I +GY ++V  G+AL+ MYAKCGSI  A Q+F+ +  R+ VSWNA++SAYA +
Sbjct: 521 KQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQN 580

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G   L LFEEM R G  PD +S+L +L AC + GL E G+  F+ + +IY L P  EH
Sbjct: 581 GDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEH 640

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           +A  +D+L R GR  EA  L+   PF    ++W ++++   +  N + +  A+ +L +++
Sbjct: 641 YASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMK 700

Query: 664 P-KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
             +DA  ++ +SN+YA  G  D   KV+  M +  + K    SW+EI  K H F A+ K 
Sbjct: 701 VLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKT 760

Query: 723 HPESEEIYSKLDLLNDEM 740
           HP+  EI  KLD L ++M
Sbjct: 761 HPQMREIMKKLDELEEKM 778



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 230/502 (45%), Gaps = 53/502 (10%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            + A  IK+GF  N +    L+  +   G    A  +F  + +K++   N MI+ Y K+G
Sbjct: 87  HVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG 146

Query: 240 -------------------------------ESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
                                          +   AF +F+ +     +P+  +   ++S
Sbjct: 147 NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS 206

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
              E   V E +Q+H   +K G    + V N+++  Y K      A ++F+ I ER+ ++
Sbjct: 207 GFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVT 266

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           + AL++GY + G   +AIN F +  ++G        A ++       ++E G Q+HGF +
Sbjct: 267 FNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVV 326

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARML------LDGFSCKYTAEFNAILSGFMEKIA 442
           K  ++ +V +  AL+D Y+K   +  A  L      +DG S      +N +++ +     
Sbjct: 327 KCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGIS------YNVLVTCYAWNGR 380

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
             E   + LF + +  G +     F+ LLS++A    L  GR +H+ +I T   ++++VG
Sbjct: 381 VKES--LELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVG 438

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
           N+L+ MYAKCG    A +IF  ++ +  V W AM+S+Y   GL +  L LF EM+R    
Sbjct: 439 NSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIG 498

Query: 563 PDDISILGVLQACIYSGLSEGGICLFNEIE-QIYGLRPILEHF--ACMVDLLGRAGRLSE 619
            D  +   +++AC     S   + L  ++   I G   I   F  + +VD+  + G + +
Sbjct: 499 ADAATYASIVRACA----SLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKD 554

Query: 620 AMNLINSSPFSESPLLWRTLVS 641
           A+ +    P   S + W  L+S
Sbjct: 555 ALQMFQEMPVRNS-VSWNALIS 575



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 186/428 (43%), Gaps = 40/428 (9%)

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVE---EGKQLHGLA--VKFGVVREISVGNAIVTM 304
           H  S  +E       N+I  C  NL          LH  A  +K G        N +V  
Sbjct: 51  HFGSKQYELTLSLMNNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKS 110

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH----------------------- 341
           + + G    A ++FD +  +N+ S   +I GY++SG+                       
Sbjct: 111 FLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLI 170

Query: 342 GGKAING--------FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
           GG A N         F+E    GI  D   LAT++ G +   ++    Q+H   IK GY 
Sbjct: 171 GGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYD 230

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           S + +  +L+D Y K   L  A  L +    + +  FNA+L+G+  K   + E + + F 
Sbjct: 231 STLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGY-SKEGFNREAINLFFK 289

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
            Q + G  P   TF+ +L+       +  G+ +H + +K  +  +V V NAL+  Y+K  
Sbjct: 290 MQEV-GYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHD 348

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            +  A ++F  + + D +S+N +++ YA +G  K +L LF+E++  GF   +     +L 
Sbjct: 349 RVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLS 408

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
               S   + G  + ++      +  IL   + +VD+  + G   EA N I S    +S 
Sbjct: 409 IAAISLNLDIGRQIHSQTIVTDAISEILVGNS-LVDMYAKCGEFGEA-NRIFSDLAIQSS 466

Query: 634 LLWRTLVS 641
           + W  ++S
Sbjct: 467 VPWTAMIS 474



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 43/271 (15%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  +V+       L LG+ +H+ ++ SG  ++ F  + L+++YAK   +  A ++F  M 
Sbjct: 504 YASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMP 563

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--R 175
           VR++++W +LI  Y  +GD +  L +  +M RS  + +  +   IL ACS   L+E+  +
Sbjct: 564 VRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQ 623

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
            F      + +    E+      S I M    G F EAE +   +               
Sbjct: 624 YFDSMTRIYKLVPKKEHY----ASTIDMLCRGGRFDEAEKLMAQMP-------------- 665

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
                               FEP++  +++V++ C  +   E  K+         V+R+ 
Sbjct: 666 --------------------FEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDA 705

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           +    +  +Y   G  +   ++  A+ ER +
Sbjct: 706 APYVTMSNIYAAAGEWDNVGKVKKAMRERGV 736


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/673 (31%), Positives = 382/673 (56%), Gaps = 8/673 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  +++LG+ +   +L+ G   D F A++LI LYA    ++ A++ FD M+
Sbjct: 13  FPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMI 72

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE-ACS--LLEDRIF 177
            +  + W  +I GY+  G+ +S + +  DM  SE K +  T + +L  +CS  ++E   +
Sbjct: 73  DKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVE---Y 129

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G Q+H   ++SG +    VG +L+++Y       +A  +F  +   D+   N MI  Y +
Sbjct: 130 GRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQ 189

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  + A  +F  ++S+  +P+  TFT+ +    E+  +++ K++HG  V+ GV+ ++ +
Sbjct: 190 NGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYL 249

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            +A++ +Y K   +  A +MF+  ++ +++ +TA+ISGYV +G    A+  F   L   +
Sbjct: 250 NSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKM 309

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             ++   ++++  C+  + ++LG +LHG+ IK+       +G+A++++YAK G L  A +
Sbjct: 310 IPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHL 369

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +    S K    +N+I++ F +      E+ + LF Q  + G++ D VT S  LS  A+ 
Sbjct: 370 IFGRISIKDAICWNSIITSFSQD--GKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANI 427

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  G+ +H + IK  + +D+   +ALI MYAKCG ++ A  +F  + +++ V+WN+++
Sbjct: 428 PALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSII 487

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +AY  HG    +L LF  M  EG  PD I+ L +L +C ++G  E G+  F  + + YG+
Sbjct: 488 AAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGI 547

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
              +EH+ACM DL GRAG L EA  +I S PF  +  +W TL+   ++  N + + +AS+
Sbjct: 548 PAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASR 607

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            LLDLEPK++G ++L++++ A  G      K++  M +  + K  GCSWIE+++    F 
Sbjct: 608 YLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFF 667

Query: 718 ASGKDHPESEEIY 730
           A+   HPES +IY
Sbjct: 668 AADGSHPESPQIY 680



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/419 (32%), Positives = 230/419 (54%), Gaps = 4/419 (0%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +++T   +++ C+ L +   G+ I    ++ GF+ ++FV +SLI +Y  +GC  +A   F
Sbjct: 9   DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFF 68

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +  KD    N MI  Y + GES+ A  +F  ++SS+ +P+  TF  V+S+      VE
Sbjct: 69  DKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVE 128

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
            G+QLHGL V+ G+     VGN +VT+Y K     +A ++FD + + +L+ W  +I GYV
Sbjct: 129 YGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYV 188

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           ++G    A   F E +  GI  DS    + +   +  S+L+   ++HG+ ++HG + DV 
Sbjct: 189 QNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVY 248

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
           L +AL+D+Y K  D   A  + +  S K+    + A++SG++  +    +D + +F    
Sbjct: 249 LNSALIDLYFKCRDAVMACKMFN-LSTKFDIVIYTAMISGYV--LNGMNKDALEIFRWLL 305

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
              M P+ +TFS +L   A  A +  GR LH Y IK        VG+A++ MYAKCG +D
Sbjct: 306 QKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLD 365

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            A  IF  IS +D + WN+++++++  G  + A+ LF +M  EG   D +++   L AC
Sbjct: 366 LAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSAC 424



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 194/389 (49%), Gaps = 14/389 (3%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+ YTF  VI  C     V  GK +  + ++ G   ++ V ++++ +Y  +G  E+A R 
Sbjct: 8   PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRF 67

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD + +++ + W  +I+GYV+ G    AI  F + +      DS   A V+      + +
Sbjct: 68  FDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMV 127

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           E G QLHG  ++ G      +G  LV +Y+KG  L  AR L D         +N ++ G+
Sbjct: 128 EYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGY 187

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           ++    D  D  +LF++   AG++PD +TF+  L   A  + L + + +H Y ++ G   
Sbjct: 188 VQNGFMD--DASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           DV + +ALI +Y KC     A ++F   +  DIV + AM+S Y L+G+ K AL +F  + 
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLL 305

Query: 558 REGFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           ++   P+ ++   +L AC     I  G    G  + NE+E+   +       + ++++  
Sbjct: 306 QKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVG------SAIMNMYA 359

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           + GRL  A +LI      +  + W ++++
Sbjct: 360 KCGRLDLA-HLIFGRISIKDAICWNSIIT 387



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G+ PD  TF  ++        +  G+ +    ++ G+  D+ V ++LI +YA  G I+ A
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            + F  + D+D V WN M++ Y   G    A+ LF++M      PD ++   VL      
Sbjct: 65  RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124

Query: 579 GLSEGGICLFNEIEQIYGL 597
            + E G        Q++GL
Sbjct: 125 AMVEYG-------RQLHGL 136


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/653 (31%), Positives = 354/653 (54%), Gaps = 3/653 (0%)

Query: 95  EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE 154
           E N ++    K   L+ A++LFD ML R  I+WT++I GY++  +    L +   M+   
Sbjct: 3   EINLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEP 62

Query: 155 E-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
               +    S+ L+AC L     FGE +H +++K+ F N+VFVG++L+ MY   G   E 
Sbjct: 63  GLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEG 122

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
             VF+ +  ++V     +I    +AG ++ A   F  +       + YTF++ +  C ++
Sbjct: 123 CIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADS 182

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             +  G+++H   +K G      V N + TMY K G  +   R+F+++++R+++SWT +I
Sbjct: 183 GALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTII 242

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
              V+ G    A+  F    +  +  +    A VI GC+    +E G QLH   I+ G +
Sbjct: 243 MSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLV 302

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
             + +  +++ +Y+K   L  A  +  G S +    ++ ++SG+ +      E+     S
Sbjct: 303 DSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQ--GGCGEEAFDYLS 360

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
             R  G  P+   F+ +LS+  + A L +G+ LHA+ +  G   + +V +ALI MY+KCG
Sbjct: 361 WMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCG 420

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           SI  A +IF      +IVSW AM++ YA HG  + A+ LF+++ + G  PD ++ + VL 
Sbjct: 421 SIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLA 480

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC ++GL + G   FN + +++ + P  +H+ CM+DLL RAGRL++A ++I S PF    
Sbjct: 481 ACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDD 540

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           ++W TL+   ++  +      A++++L L+P  A + I ++NMYA +G   EAA+VR  M
Sbjct: 541 VVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMM 600

Query: 694 NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKD 746
               + KE G SWI+   ++  FV+  + HPE E IY  LDLL  + ++ +++
Sbjct: 601 KSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAEMHMQE 653



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 233/475 (49%), Gaps = 8/475 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           +  G+++H + +K+   N  F  + L+++Y K  ++D    +F  M +R+ ++WT++I G
Sbjct: 84  VSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAG 143

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            +  G  +  L    DM+  +   + +T S  L+AC+      +G +IH   +K GF   
Sbjct: 144 LVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAV 203

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            FV  +L +MY   G       +F  +  +DV     +I+   + G+ E A   F  +  
Sbjct: 204 SFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRE 263

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +D  PN++TF  VIS C     +E G+QLH   ++ G+V  +SV N+I+ MY K    + 
Sbjct: 264 TDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDL 323

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F  +S R++ISW+ +ISGY + G G +A +        G   +    A+V+  C  
Sbjct: 324 ASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGN 383

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + LE G QLH   +  G   +  + +AL+++Y+K G +K A  + D         + A+
Sbjct: 384 MAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAM 443

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++G+ E      ++ + LF +    G+ PD VTF  +L+ + S A LV     H ++  +
Sbjct: 444 INGYAEH--GYSQEAIDLFKKLPKVGLRPDSVTFIAVLA-ACSHAGLV-DLGFHYFNSLS 499

Query: 494 GYAADVIVGN---ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
                    +    +I +  + G ++ A  + + +   RD V W+ +L A  +HG
Sbjct: 500 KVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHG 554



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 186/386 (48%), Gaps = 8/386 (2%)

Query: 37  KSQVAYLCS--ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTF 94
           K  +AY     I  V C   T         +K    SG L  G+ +H   LK G    +F
Sbjct: 151 KEALAYFSDMWIQKVGCDTYTF-----SSALKACADSGALNYGREIHCQTLKKGFTAVSF 205

Query: 95  EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE 154
            AN L  +Y K  +LD   +LF+ M  R  ++WT++I   +  G  E+ +     M  ++
Sbjct: 206 VANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETD 265

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
              NE T + ++  C+ L    +GEQ+HA  I+ G  +++ V  S+++MY        A 
Sbjct: 266 VSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLAS 325

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
            VF+GL+ +D+   + MI  Y + G  E AF     +      PN++ F +V+SVC    
Sbjct: 326 TVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMA 385

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
            +E+GKQLH   +  G+ +   V +A++ MY K G  +EA ++FD     N++SWTA+I+
Sbjct: 386 ILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMIN 445

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYL 393
           GY   G+  +AI+ F +   +G+  DS     V+  CS    ++LG    +  +  H   
Sbjct: 446 GYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQIC 505

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLL 419
                   ++D+  + G L  A  ++
Sbjct: 506 PSKDHYGCMIDLLCRAGRLNDAESMI 531


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 227/720 (31%), Positives = 373/720 (51%), Gaps = 45/720 (6%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P+L+     S D+  G A+HA +++ G           +NLY+K     VA+KL     
Sbjct: 53  YPKLLLQFTASKDVSSGMAIHARIIRLGLLGLRNRL---VNLYSKCQCFRVARKLVIDSS 109

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL--------- 171
               ++W++LI GY+ +G  E  L    +MY    K NE T S +L+ CSL         
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169

Query: 172 -------------------------------LEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
                                          LED  +G ++H + IK G++++ F   +L
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           + MY  SGC   A  VF  +   D+   N +I       ++++A  +   + S    P+ 
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           +T ++ +  C     V+ G+QLH   +K  +  +  VG  ++ MY K G+ ++A  +FD 
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           +  +++I W ++ISGY   G+  +A++ F      G+  + + L+T++   +        
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q+H  +IK GY  D  +  +L+D Y K   L+ A  + +    +    + ++++ + + 
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
              +E   M L  Q R   ++PD   FS L +  A+ +   +G+ +H + +K G  +DV 
Sbjct: 470 GLGEEALKMYLRMQDR--DIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVF 527

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
            GN+L+ MYAKCGSID A  IF  IS R IVSW+AM+   A HG G+ AL LF +M + G
Sbjct: 528 AGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNG 587

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             P+ I+++ VL AC ++GL       F  +E+++G+ P  EH+ACMVD+LGR GRL EA
Sbjct: 588 ILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEA 647

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
           M L+   PF  S  +W  L+  +++  N +    A++ LL LEP+ +G+ IL++N+YA  
Sbjct: 648 MVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYAST 707

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           GM D  AKVR +M +  + KE G SWIE+  K++ F+   + HP S+EIY KLD L + +
Sbjct: 708 GMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERL 767


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/705 (30%), Positives = 382/705 (54%), Gaps = 8/705 (1%)

Query: 51  CSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD 110
           CS   L    +  L+        L+ G+ +H  +L    Q D    N+++++Y K   L 
Sbjct: 91  CSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLK 150

Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
            A+ +FD M +++ ++WTS+I GY   G+ ++ + +   M RS    +  T   I+++CS
Sbjct: 151 EARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCS 210

Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
            L+D     Q+HA  +KS F  ++    +LISMY       +A NVF  +  KD+     
Sbjct: 211 GLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGS 270

Query: 231 MILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
           MI  +++ G    A   F  +LS S ++PN++ F +  S C + L  + G+Q+HGL +KF
Sbjct: 271 MIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKF 330

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           G+  ++  G ++  MY K G  E A  +F  I + +L++W A+I+G+    +  ++ + F
Sbjct: 331 GLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFF 390

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
            +    G+  +   + +++  CS    L  G+Q+H + +K G+  D+ +  +L+ +Y+K 
Sbjct: 391 SQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKC 450

Query: 410 GDLKSARMLLDGFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            +L  A  + +    K     +N +L+  +++  +   +V+ L      + ++PD VT +
Sbjct: 451 SNLNDALQVFEDIGNKADIVSWNTLLTACLQQ--NQAGEVLRLTKLMFASRIKPDHVTLT 508

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L  S   A    G  +H + +K+G   D+ V NALI MY KCGS++ A ++F  I + 
Sbjct: 509 NVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNP 568

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           DI+SW++++  YA  G GK A  LF  M+  G  P++I+ +G+L AC + G+ E G+ L+
Sbjct: 569 DIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLY 628

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +++ Y + P  EH +CMVDLL RAG L  A + I   PF    ++W+TL++  K+  N
Sbjct: 629 RTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGN 688

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            +    A++ +L ++P ++ + +++ N++A  G   + A++R++M  + + K  G SWIE
Sbjct: 689 LEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIE 748

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFELQ 753
           I  K+H F+A    HPE  +IY+ L    +E+ L++ D S   LQ
Sbjct: 749 IKDKVHVFLAEDNLHPERGKIYTML----EELMLQILDDSCDPLQ 789


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 227/683 (33%), Positives = 361/683 (52%), Gaps = 11/683 (1%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           ++    S  LK G+ +H  +   G Q++   + +LI  Y   +    A+ +F        
Sbjct: 10  LRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLD 69

Query: 125 IT-WTSLIKGYLDDGDYESVLGI----ACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
           ++ W +L+  Y ++  +   L +     C+ Y   + +   T  V+L+AC  L   I+G 
Sbjct: 70  VSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFY---TYPVVLKACGGLGRVIYGR 126

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IH   +K+G   +VFVG+SL++MY     F +A  +F     +DV C N +I  Y K G
Sbjct: 127 RIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDG 186

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           ++EMA   F  +    FEPN  TFT V+S C   L +E GK++H   ++  ++ +  V +
Sbjct: 187 KAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLS 246

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+V MYGK G  E A+ +F+ I  +N I+W A+I+GY   G     I   +   D G   
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKP 306

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
               L ++I   S    L  G  +HG+ +++    D+ +  +L+D Y K G + SA  + 
Sbjct: 307 TLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIF 366

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
              S      +N ++SG +  +  +    + ++   +   ++PD +TFS  LS  +  A 
Sbjct: 367 RTISKNEVVSWNVMISGHV--MVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAA 424

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L +GR LH   I     A+ IV  AL+ MYAKCG +D A ++F  +  RD+VSW +M+ A
Sbjct: 425 LDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFA 484

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y  HG    AL LF+EM++     D ++ L VL AC ++GL + G   FNE+   Y ++P
Sbjct: 485 YGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKP 544

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKR 658
            +EH++C++DLLGRAGRL EA  ++  S  + S + L  TL S   L  N    I   K 
Sbjct: 545 GIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKM 604

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L++++P D  ++IL+SNMYA     DE  KVR  M +L L K  GCSWIEI+ ++H F A
Sbjct: 605 LIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFA 664

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
             K +P ++ +Y  L++L   M+
Sbjct: 665 EDKSNPLADGVYECLNILGCHME 687



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 239/508 (47%), Gaps = 20/508 (3%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F  +P ++K   G G +  G+ +H  LLK+G   D F  ++L+N+YAK ++   A KLFD
Sbjct: 106 FYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFD 165

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
               R    W ++I  Y  DG  E  L     M     + N  T +V++ +C+ L +   
Sbjct: 166 EFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLER 225

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+++H   I+     + FV ++L+ MY   GC   A+ VF  +  K+    N MI  Y+ 
Sbjct: 226 GKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSL 285

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G+S     + + +     +P   T T++I     ++ +  GK +HG  ++  +  +I +
Sbjct: 286 KGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFI 345

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             +++  Y K G    AE +F  IS+  ++SW  +ISG+V  G+  +A++ +    +  +
Sbjct: 346 DVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHV 405

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D+   ++ +  CS  + L+ G +LH   I H   ++  +  AL+D+YAK GD+  AR 
Sbjct: 406 KPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARK 465

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L      +    + +++  F         + + LF + +   +  D VTF  +LS + S 
Sbjct: 466 LFHQLPKRDLVSWTSMI--FAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLS-ACSH 522

Query: 478 ACLVRGRSLH------AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR--D 529
           A LV    ++       Y IK G        + LI +  + G +  A++I +   +   D
Sbjct: 523 AGLVDEGYMYFNEMVVQYDIKPGIEH----YSCLIDLLGRAGRLHEAYEILQRSKETRSD 578

Query: 530 IVSWNAMLSAYALH-----GLGKGALLL 552
           I   + + SA  LH     G+  G +L+
Sbjct: 579 IGLLSTLFSACLLHNNFVLGIQIGKMLI 606



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 10/286 (3%)

Query: 48  SVSCSERTLLFND---WPQLVKI------SIGSGDLKLGQAVHAFLLKSGSQNDTFEANN 98
           S SC E  +  ND    P L+ +      S  S  L+ G+ +H ++L++    D F   +
Sbjct: 289 SRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVS 348

Query: 99  LINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFN 158
           LI+ Y K   +  A+ +F  +     ++W  +I G++  G++   L I  +M     K +
Sbjct: 349 LIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPD 408

Query: 159 EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR 218
             T S  L ACS L     G ++H   I    E N  V  +L+ MY   G   EA  +F 
Sbjct: 409 ALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFH 468

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            L  +D+     MI  Y   G++  A  +F  +   +   +  TF  V+S C     V+E
Sbjct: 469 QLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDE 528

Query: 279 GKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
           G    + + V++ +   I   + ++ + G+ G   EA  +     E
Sbjct: 529 GYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKE 574


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/684 (31%), Positives = 369/684 (53%), Gaps = 3/684 (0%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           + +  +++ +I + D   G+++H  +LK G+  D F  N L+N Y  F  L+ A KLFD 
Sbjct: 4   HSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDE 63

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M + + +++ +L +G+     ++    +   ++R   + N+   + +L+    ++     
Sbjct: 64  MPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTC 123

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +HA+  K G + + FVGT+LI  Y   G    A  VF G+ +KD+     M+  Y + 
Sbjct: 124 LSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              E +  +F  +    + PN++T +  +  C      + GK +HG A+K    R++ VG
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVG 243

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A++ +Y K G   EA++ F+ + + +LI W+ +IS Y +S    +A+  F       + 
Sbjct: 244 IALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVV 303

Query: 359 CDSS-CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             ++   A+V+  C+    L LG Q+H   +K G  S+V +  AL+D+YAK G+++++  
Sbjct: 304 VPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVK 363

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L  G + K    +N I+ G+++    D E  + LFS      ++P  VT+S +L  SAS 
Sbjct: 364 LFTGSTEKNEVAWNTIIVGYVQ--LGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASL 421

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  GR +H+ +IKT Y  D +V N+LI MYAKCG ID A   F  +  +D VSWNA++
Sbjct: 422 VALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALI 481

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             Y++HGLG  AL LF+ M++    P+ ++ +GVL AC  +GL + G   F  + Q YG+
Sbjct: 482 CGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGI 541

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P +EH+ CMV LLGR+G+  EA+ LI   PF  S ++WR L+    +  N     + ++
Sbjct: 542 EPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQ 601

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           R+L++EP+D  + +L+SNMYA     D  A VR  M   ++ KE G SW+E    +H+F 
Sbjct: 602 RVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFT 661

Query: 718 ASGKDHPESEEIYSKLDLLNDEMK 741
                HP  + I++ L+ L  + +
Sbjct: 662 VGDTSHPNIKLIFAMLEWLYKKTR 685



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 189/417 (45%), Gaps = 19/417 (4%)

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           + +++ N++     N     GK LH   +K G   ++   N ++  Y   G  E+A ++F
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           D +   N +S+  L  G+ RS    +A    L     G   +     T++         +
Sbjct: 62  DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
             L +H +  K G+ +D  +GTAL+D Y+  G++ +AR + DG   K    +  +++ + 
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
           E      ED ++LF Q R+ G  P+  T S  L           G+S+H  ++K  Y  D
Sbjct: 182 ENYC--HEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRD 239

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           + VG AL+ +Y K G I  A Q F+ +   D++ W+ M+S YA     K AL LF  M++
Sbjct: 240 LYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299

Query: 559 EG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPILEHFACMVDLL 611
                P++ +   VLQAC         + L N   QI+      GL   +     ++D+ 
Sbjct: 300 SSVVVPNNFTFASVLQAC-------ASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVY 352

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRT-LVSVSKLMANSKFSILASKRL-LDLEPKD 666
            + G +  ++ L   S   ++ + W T +V   +L    K   L S  L LD++P +
Sbjct: 353 AKCGEIENSVKLFTGST-EKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTE 408


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/664 (31%), Positives = 360/664 (54%), Gaps = 26/664 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G++VHA   K G  ++TF  N LI LY +     +A+++F  M  R  +T+ +LI G+  
Sbjct: 162 GRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQ 221

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
               E  L I  +M  S    +  T S +L AC+ L D   G Q+H++  K+G  ++  +
Sbjct: 222 CAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIM 281

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL+ +Y   G    A  +F      +V   N +++ + +  +   +F +F  + ++  
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGI 341

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN +T+  ++  C     ++ G+Q+H L+VK G   ++ V   ++ MY K+G  E+A R
Sbjct: 342 RPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           + + + E++++SWT++I+GYV+  +   A+  F E    GI  D+  LA+ I GC+    
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKA 461

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           +  GLQ+H      GY  DV +  ALV++YA+ G ++ A    +    K    +N ++SG
Sbjct: 462 MRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F +  +   E+ + +F +   +G++ +  TF   LS SA+ A + +G+ +HA  IKTG++
Sbjct: 522 FAQ--SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +  VGNALI++Y KCGS + A   F  +S+R+ VSWN ++++ + HG G  AL  F++M
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQM 639

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K+EG +                         F  +   YG+RP  +H+AC++D+ GRAG+
Sbjct: 640 KKEGLS------------------------YFKSMSDKYGIRPRPDHYACVIDIFGRAGQ 675

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A   +   P +   ++WRTL+S  K+  N +   LA+K LL+LEP D+ S++L+SN 
Sbjct: 676 LDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNA 735

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA  G      +VR  M D  + KE G SWIE+ + +H F    + HP +E+IY+ L ++
Sbjct: 736 YAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVI 795

Query: 737 NDEM 740
           ND +
Sbjct: 796 NDRV 799



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 253/495 (51%), Gaps = 2/495 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA  +  G   D    N LI+LY+K   +  A+++F+ +  R  ++W +++ GY  +G 
Sbjct: 64  IHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E  L +   M+R+      +  S +L +C+  E    G  +HA   K GF +  FVG +
Sbjct: 124 GEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNA 183

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           LI++Y   G FR AE VF  + ++D    N +I  + +    E A  +F  + SS   P+
Sbjct: 184 LITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPD 243

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T +++++ C     +++G QLH    K G+  +  +  +++ +Y K G  E A  +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFN 303

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
             +  N++ W  ++  + +     K+   F +    GI  +      ++  C+    ++L
Sbjct: 304 LGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDL 363

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G Q+H  ++K G+ SD+ +   L+D+Y+K G L+ AR +L+    K    + ++++G+++
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ 423

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
              +  +D +  F + +  G+ PD +  +  +S  A    + +G  +HA    +GY+ DV
Sbjct: 424 H--EYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDV 481

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            + NAL+ +YA+CG I  AF  F+ I  +D ++WN ++S +A  GL + AL +F  M + 
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541

Query: 560 GFAPDDISILGVLQA 574
           G   +  + +  L A
Sbjct: 542 GVKHNVFTFVSALSA 556



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 250/528 (47%), Gaps = 13/528 (2%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI-F 177
           M  R A +    + G+L   D   VL +  D  R          +  L AC     R   
Sbjct: 1   MTRRGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             +IHA AI  G   +  VG  LI +Y  +G    A  VF  L+ +D      M+  Y +
Sbjct: 61  VPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  ++  +  +   P  Y  ++V+S C +     +G+ +H    K G   E  V
Sbjct: 121 NGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFV 180

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA++T+Y + G    AER+F  +  R+ +++  LISG+ +  HG  A+  F E    G+
Sbjct: 181 GNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGL 240

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   +++++  C+   +L+ G QLH +  K G  SD  +  +L+D+Y K GD+++A +
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALV 300

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +  +      +N IL  F +   +D      LF Q + AG+ P+  T+  +L      
Sbjct: 301 IFNLGNRTNVVLWNLILVAFGQ--INDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCT 358

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +  G  +H+ S+KTG+ +D+ V   LI MY+K G ++ A ++ + + ++D+VSW +M+
Sbjct: 359 GEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMI 418

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y  H   K AL  F+EM++ G  PD+I +   +  C        G+ +   +  + G 
Sbjct: 419 AGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARV-YVSGY 477

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE----SPLLWRTLVS 641
              +  +  +V+L  R GR+ EA      S F E      + W  LVS
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAF-----SSFEEIEHKDEITWNGLVS 520



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 212/473 (44%), Gaps = 26/473 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+ G  +H++L K+G  +D     +L++LY K   ++ A  +F+     + + W  ++
Sbjct: 258 GDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLIL 317

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             +    D      + C M  +  + N+ T   IL  C+   +   GEQIH+ ++K+GFE
Sbjct: 318 VAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFE 377

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++++V   LI MY   G   +A  V   L  KDV     MI  Y +    + A   F  +
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEM 437

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P++    + IS C     + +G Q+H      G   ++S+ NA+V +Y + G  
Sbjct: 438 QKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRI 497

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            EA   F+ I  ++ I+W  L+SG+ +SG   +A+  F+     G+  +     + +   
Sbjct: 498 REAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSAS 557

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  + ++ G Q+H   IK G+  +  +G AL+ +Y K G  + A+M     S +    +N
Sbjct: 558 ANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            I++   +     E   +  F Q +  G+       S   S+S      +R R  H    
Sbjct: 618 TIITSCSQHGRGLE--ALDFFDQMKKEGL-------SYFKSMSDKYG--IRPRPDH---- 662

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
              YA        +I ++ + G +D A +  + +    D + W  +LSA  +H
Sbjct: 663 ---YA-------CVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVH 705



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 163/297 (54%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++    +G++ LG+ +H+  +K+G ++D + +  LI++Y+K+  L+ A+++ + + 
Sbjct: 348 YPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK 407

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  ++WTS+I GY+     +  L    +M +     +    +  +  C+ ++    G Q
Sbjct: 408 EKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQ 467

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA    SG+  +V +  +L+++Y   G  REA + F  + +KD    N ++  + ++G 
Sbjct: 468 IHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGL 527

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VF+ +  S  + N +TF + +S       +++GKQ+H   +K G   E  VGNA
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           ++++YGK G  E+A+  F  +SERN +SW  +I+   + G G +A++ F +    G+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGL 644


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 216/622 (34%), Positives = 322/622 (51%), Gaps = 22/622 (3%)

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M R     N +T    L+ACS L D   G  IH  AI +G + ++FV T+L+ MY    C
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE-----PNDYTFT 264
             +A ++F  +  +D+   N M+  Y   G   M  H   HLLS   +     PN  T  
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHG---MYHHAVAHLLSMQMQMHRLRPNASTLV 117

Query: 265 NVISVCYENLGVEEGKQLHGLAV----------KFGVVREISVGNAIVTMYGKHGMSEEA 314
            ++ +  +   + +G  +H   +          K  +   + +G A++ MY K G    A
Sbjct: 118 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 177

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSV 373
            R+FDA+  RN ++W+ALI G+V      +A   F   L  G+C    + +A+ +  C+ 
Sbjct: 178 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 237

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +L +G QLH    K G  +D+  G +L+ +YAK G +  A  L D  + K T  ++A+
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SG+++      E+  ++F + +   +EPD  T   L+   +  A L  GR  H   I  
Sbjct: 298 VSGYVQN--GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G A++  + NALI MYAKCG ID + Q+F  +  RDIVSWN M++ Y +HGLGK A  LF
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            EM   GF PD ++ + +L AC +SGL   G   F+ +   YGL P +EH+ CMVDLL R
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
            G L EA   I S P      +W  L+   ++  N       S+ + +L P+  G+F+L+
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 535

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+Y+  G  DEAA+VR         K  GCSWIEI+  LH FV   + HP+S EIY +L
Sbjct: 536 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 595

Query: 734 D-LLNDEMKLKVKDSSAFELQD 754
           D +L    KL  +  ++F LQD
Sbjct: 596 DNILVGIKKLGYQPDTSFVLQD 617



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 241/523 (46%), Gaps = 30/523 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P  +K      D   G+A+H   + +G Q D F +  L+++Y K   L  A  +F  M 
Sbjct: 13  FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 72

Query: 121 VRSAITWTSLIKGYLDDGDYESVLG--IACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
            R  + W +++ GY   G Y   +   ++  M     + N  T   +L   +       G
Sbjct: 73  ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 132

Query: 179 EQIHAFAI----------KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
             +HA+ I          KS   + V +GT+L+ MY   G    A  VF  +  ++    
Sbjct: 133 TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTW 192

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSD---FEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
           + +I  +        AF +F  +L+       P   +  + +  C     +  G+QLH L
Sbjct: 193 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHAL 250

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
             K GV  +++ GN++++MY K G+ ++A  +FD ++ ++ +S++AL+SGYV++   G+A
Sbjct: 251 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN---GRA 307

Query: 346 INGFLEFLDLGIC---CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
              FL F  +  C    D++ + ++I  CS  + L+ G   HG  I  G  S+  +  AL
Sbjct: 308 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNAL 367

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+YAK G +  +R + +    +    +N +++G+   I    ++   LF +    G  P
Sbjct: 368 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY--GIHGLGKEATALFLEMNNLGFPP 425

Query: 463 DPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           D VTF  LLS  +    ++ G+   H      G    +     ++ + ++ G +D A++ 
Sbjct: 426 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF 485

Query: 522 FKGISDR-DIVSWNAMLSAYALHG---LGKGALLLFEEMKREG 560
            + +  R D+  W A+L A  ++    LGK    + +E+  EG
Sbjct: 486 IQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 528


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 216/622 (34%), Positives = 322/622 (51%), Gaps = 22/622 (3%)

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M R     N +T    L+ACS L D   G  IH  AI +G + ++FV T+L+ MY    C
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE-----PNDYTFT 264
             +A ++F  +  +D+   N M+  Y   G   M  H   HLLS   +     PN  T  
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHG---MYHHAVAHLLSMQMQMHRLRPNASTLV 117

Query: 265 NVISVCYENLGVEEGKQLHGLAV----------KFGVVREISVGNAIVTMYGKHGMSEEA 314
            ++ +  +   + +G  +H   +          K  +   + +G A++ MY K G    A
Sbjct: 118 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 177

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSV 373
            R+FDA+  RN ++W+ALI G+V      +A   F   L  G+C    + +A+ +  C+ 
Sbjct: 178 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 237

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +L +G QLH    K G  +D+  G +L+ +YAK G +  A  L D  + K T  ++A+
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SG+++      E+  ++F + +   +EPD  T   L+   +  A L  GR  H   I  
Sbjct: 298 VSGYVQN--GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G A++  + NALI MYAKCG ID + Q+F  +  RDIVSWN M++ Y +HGLGK A  LF
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            EM   GF PD ++ + +L AC +SGL   G   F+ +   YGL P +EH+ CMVDLL R
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
            G L EA   I S P      +W  L+   ++  N       S+ + +L P+  G+F+L+
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 535

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+Y+  G  DEAA+VR         K  GCSWIEI+  LH FV   + HP+S EIY +L
Sbjct: 536 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 595

Query: 734 D-LLNDEMKLKVKDSSAFELQD 754
           D +L    KL  +  ++F LQD
Sbjct: 596 DNILVGIKKLGYQPDTSFVLQD 617



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 241/523 (46%), Gaps = 30/523 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P  +K      D   G+A+H   + +G Q D F +  L+++Y K   L  A  +F  M 
Sbjct: 13  FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 72

Query: 121 VRSAITWTSLIKGYLDDGDYESVLG--IACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
            R  + W +++ GY   G Y   +   ++  M     + N  T   +L   +       G
Sbjct: 73  ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 132

Query: 179 EQIHAFAI----------KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
             +HA+ I          KS   + V +GT+L+ MY   G    A  VF  +  ++    
Sbjct: 133 TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTW 192

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSD---FEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
           + +I  +        AF +F  +L+       P   +  + +  C     +  G+QLH L
Sbjct: 193 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHAL 250

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
             K GV  +++ GN++++MY K G+ ++A  +FD ++ ++ +S++AL+SGYV++   G+A
Sbjct: 251 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN---GRA 307

Query: 346 INGFLEFLDLGIC---CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
              FL F  +  C    D++ + ++I  CS  + L+ G   HG  I  G  S+  +  AL
Sbjct: 308 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNAL 367

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+YAK G +  +R + +    +    +N +++G+   I    ++   LF +    G  P
Sbjct: 368 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY--GIHGLGKEATALFLEMNNLGFPP 425

Query: 463 DPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           D VTF  LLS  +    ++ G+   H      G    +     ++ + ++ G +D A++ 
Sbjct: 426 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF 485

Query: 522 FKGISDR-DIVSWNAMLSAYALHG---LGKGALLLFEEMKREG 560
            + +  R D+  W A+L A  ++    LGK    + +E+  EG
Sbjct: 486 IQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 528


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 226/672 (33%), Positives = 364/672 (54%), Gaps = 24/672 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+ G+A+HA LL++GS +  +  N+L+NLYAK   +  A+ +F+ +  +  ++W  LI 
Sbjct: 25  DLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLIN 84

Query: 133 GYLDDGD--YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           GY   G   Y  V+ +   M       N HT S +  A S   +   G Q HA AIK+  
Sbjct: 85  GYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSN 144

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             +VFVG+SLI+MY   GC  +A  VF  +  ++      +I  Y     +  A+ +F+ 
Sbjct: 145 FYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLL 204

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +   +   + + +T+V+S       V  GKQ+H LA+K G++   SVGNA+VTMYGK G 
Sbjct: 205 MRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGC 264

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            ++A + F+   +++ I+W+A+I+GY ++G   +A+N F      G          VI+ 
Sbjct: 265 LDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINA 324

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           CS    LE G Q+HG+++K GY   +        + AK G L  AR   D          
Sbjct: 325 CSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLK------- 377

Query: 431 NAILSGFMEKIADDEEDVMVLFS-QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
                         E D+++  S + ++  + P  +T + +L   +S A L +G+ +HA 
Sbjct: 378 --------------EPDIVLWTSCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQ 423

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           +IK G++ +V +G+AL TMYAKCGS++    +F+ +  RDI++WNAM+S  + +G G  A
Sbjct: 424 TIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKA 483

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LFEE++     PD ++ + VL AC + GL E G   F  +   +G+ P +EH+ACMVD
Sbjct: 484 LELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVD 543

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           +L RAG+L E    I S+       LWR L+   +   N +    A ++L++L  +++ +
Sbjct: 544 ILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSA 603

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           +IL+S++Y   G  D+  +VR  M    ++KE GCSWIE+ S++H FV   + HP+  +I
Sbjct: 604 YILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKI 663

Query: 730 YSKLDLLNDEMK 741
            S+L  L D MK
Sbjct: 664 CSELRRLRDHMK 675



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 222/479 (46%), Gaps = 24/479 (5%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L  C+  +D   G+ IHA  +++G  ++V++  SL+++Y   G   +A+ VF  +  KD
Sbjct: 16  LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75

Query: 225 VRCVNFMILEYNKAGESEMAF--HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           V   N +I  Y++ G    +F   +F  + + +  PN +TF+ V +    +     G Q 
Sbjct: 76  VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H LA+K     ++ VG++++ MY K G   +A ++FD I ERN +SW  +ISGY      
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +A   FL         D     +V+   +V   +  G Q+H  A+K+G LS   +G AL
Sbjct: 196 FEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNAL 255

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           V +Y K G L  A    +    K    ++A+++G+ +  A D  + + LF    L G +P
Sbjct: 256 VTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQ--AGDSHEALNLFYNMHLNGNKP 313

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
              TF  +++  +    L  G+ +H YS+K GY   +        + AKCGS+  A + F
Sbjct: 314 SEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGF 373

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             + + DIV W +                    M+ E   P ++++  VL+AC      E
Sbjct: 374 DYLKEPDIVLWTSC------------------RMQMERIMPHELTMASVLRACSSLAALE 415

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            G  +  +  + YG    +   + +  +  + G L +  NL+     S   + W  ++S
Sbjct: 416 QGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDG-NLVFRRMPSRDIMTWNAMIS 472



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 175/342 (51%), Gaps = 13/342 (3%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P   +F +++  C     +++GK +H   ++ G    + + N++V +Y K G   +A+ +
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 318 FDAISERNLISWTALISGYVRSGHGGKA--INGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           F++I+ ++++SW  LI+GY + G  G +  +  F          +    + V    S   
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
               GLQ H  AIK     DV +G++L+++Y K G +  AR + D    + T  +  I+S
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187

Query: 436 GF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           G+ ME++A +  ++ +L  ++  A    D   ++ +LS       +  G+ +H  ++K G
Sbjct: 188 GYAMERMAFEAWELFLLMRREEGA---HDKFIYTSVLSALTVPDLVHYGKQIHCLALKNG 244

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             +   VGNAL+TMY KCG +D AF+ F+   D+D ++W+AM++ YA  G    AL LF 
Sbjct: 245 LLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFY 304

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
            M   G  P + + +GV+ AC   G  E G       +QI+G
Sbjct: 305 NMHLNGNKPSEFTFVGVINACSDIGALEEG-------KQIHG 339



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 17/327 (5%)

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+   +L+ G  +H   ++ G  S V L  +LV++YAK G +  A+++ +  + K    +
Sbjct: 20  CTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSW 79

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N +++G+ +K       VM LF + R     P+  TFS + + ++S      G   HA +
Sbjct: 80  NCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALA 139

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IKT    DV VG++LI MY K G +  A ++F  I +R+ VSW  ++S YA+  +   A 
Sbjct: 140 IKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAW 199

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPILEHF 604
            LF  M+RE  A D      VL A     L   G       +QI+      GL  I    
Sbjct: 200 ELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYG-------KQIHCLALKNGLLSIASVG 252

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK--FSILASKRLLDL 662
             +V + G+ G L +A      S   +  + W  +++      +S    ++  +  L   
Sbjct: 253 NALVTMYGKCGCLDDAFKTFELSG-DKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKV 689
           +P +  +F+ V N  +  G L+E  ++
Sbjct: 312 KPSEF-TFVGVINACSDIGALEEGKQI 337



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 20/264 (7%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ G+ +H + LK+G +   +       L AK   L  A+K FD +     + WTS  
Sbjct: 329 GALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTS-- 386

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
                           C M       +E T + +L ACS L     G+QIHA  IK GF 
Sbjct: 387 ----------------CRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFS 430

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             V +G++L +MY   G   +   VFR +  +D+   N MI   ++ GE   A  +F  L
Sbjct: 431 LEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEEL 490

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV-KFGVVREISVGNAIVTMYGKHG- 309
                +P+  TF NV+S C     VE GK    + + +FG++  +     +V +  + G 
Sbjct: 491 RHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGK 550

Query: 310 MSEEAERMFDAISERNLISWTALI 333
           + E  E +  A  +  +  W  L+
Sbjct: 551 LHETKEFIESATIDHGMCLWRILL 574



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 101/190 (53%), Gaps = 16/190 (8%)

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           + P   +F  LL     Q  L +G+++HA  ++TG  + V + N+L+ +YAKCGSI  A 
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 520 QIFKGISDRDIVSWNAMLSAYALHG-LGKGALL-LFEEMKREGFAPDDISILGVLQACIY 577
            +F+ I+++D+VSWN +++ Y+  G +G   ++ LF+ M+ E   P+  +  GV  A   
Sbjct: 66  LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHF------ACMVDLLGRAGRLSEAMNLINSSPFSE 631
           S  + GG+       Q + L     +F      + ++++  + G + +A  + ++ P   
Sbjct: 126 SPETFGGL-------QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIP-ER 177

Query: 632 SPLLWRTLVS 641
           + + W T++S
Sbjct: 178 NTVSWATIIS 187


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 215/694 (30%), Positives = 380/694 (54%), Gaps = 32/694 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG  +H  +++ G   D   A+ L+++YAK  R   + ++F G+  +++++W+++I 
Sbjct: 153 DTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIA 212

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFN----EHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           G + +    ++L +A   ++  +K N    +   + +L +C+ L +   G Q+HA A+KS
Sbjct: 213 GCVQN----NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 268

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            F  +  V T+ + MY      ++A+ +F      + +  N MI  Y++      A  +F
Sbjct: 269 DFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLF 328

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             L+SS    ++ + + V   C    G+ EG Q++ LA+K  +  ++ V NA + MYGK 
Sbjct: 329 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKC 388

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
               EA R+FD +  R+ +SW A+I+ + ++G G + +  F+  L   I  D     +V+
Sbjct: 389 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVL 448

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML---------- 418
             C+  S L  G+++H   +K G  S+  +G +L+D+Y+K G ++ A  +          
Sbjct: 449 KACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNV 507

Query: 419 ------LDGFSCKYTAE----FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
                 L+    K   E    +N+I+SG++ K  +  ED  +LF++    G+ PD  T++
Sbjct: 508 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMK--EQSEDAQMLFTRMMEMGITPDKFTYA 565

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L   A+ A    G+ +HA  IK    +DV + + L+ MY+KCG +  +  +F+    R
Sbjct: 566 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRR 625

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D V+WNAM+  YA HG G+ A+ LFE M  E   P+ ++ + +L+AC + GL + G+  F
Sbjct: 626 DFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYF 685

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +++ YGL P L H++ MVD+LG++G++  A+ LI   PF    ++WRTL+ V  +  N
Sbjct: 686 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 745

Query: 649 S-KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           + + +  A+  LL L+P+D+ ++ L+SN+YA  GM ++ + +R  M   +L KE GCSW+
Sbjct: 746 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 805

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           E+  +LH F+   K HP  EEIY +L L+  EMK
Sbjct: 806 ELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 839



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 173/673 (25%), Positives = 299/673 (44%), Gaps = 71/673 (10%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTF-------------------------------EANNLI 100
           G L+LG+  HA ++ SG +  TF                                 N +I
Sbjct: 20  GALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMI 79

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
           N YAK N +  A   F+ M VR  ++W S++ GYL +G+    + +  DM R+  +F+  
Sbjct: 80  NGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGR 139

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T ++IL+ CS LED   G QIH   ++ G + +V   ++L+ MY     F E+  VF+G+
Sbjct: 140 TFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 199

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             K+    + +I    +     +A   F  +   +   +   + +V+  C     +  G 
Sbjct: 200 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 259

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           QLH  A+K     +  V  A + MY K    ++A+ +FD     N  S+ A+I+GY +  
Sbjct: 260 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEE 319

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
           HG KA+  F   +  G+  D   L+ V   C++   L  GLQ++  AIK     DV +  
Sbjct: 320 HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVAN 379

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           A +D+Y K   L  A  + D    +    +NAI++   E+     E + +  S  R + +
Sbjct: 380 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH-EQNGKGYETLFLFVSMLR-SRI 437

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           EPD  TF  +L  + +   L  G  +H+  +K+G A++  VG +LI MY+KCG I+ A +
Sbjct: 438 EPDEFTFGSVLK-ACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 496

Query: 521 IFKGISDRD--------------------IVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           I      R                      VSWN+++S Y +    + A +LF  M   G
Sbjct: 497 IHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 556

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG------LRPILEHFACMVDLLGRA 614
             PD  +   VL  C  + L+  G+      +QI+       L+  +   + +VD+  + 
Sbjct: 557 ITPDKFTYATVLDTC--ANLASAGLG-----KQIHAQVIKKELQSDVYISSTLVDMYSKC 609

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL--DLEPKDAGSFIL 672
           G L ++  L+         + W  ++         + +I   +R++  +++P    +FI 
Sbjct: 610 GDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV-TFIS 667

Query: 673 VSNMYAGQGMLDE 685
           +    A  G++D+
Sbjct: 668 ILRACAHMGLIDK 680



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 243/518 (46%), Gaps = 47/518 (9%)

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG-- 290
           +E  K G  E+      H++ S F P  +    ++ V Y N      +     ++ F   
Sbjct: 14  VECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQV-YTN-----SRDFVSASMVFDRM 67

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
            +R++   N ++  Y K     +A   F+ +  R+++SW +++SGY+++G   K+I  F+
Sbjct: 68  PLRDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFV 127

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
           +    G   D    A ++  CS   +  LG+Q+HG  ++ G  +DV   +AL+D+YAKG 
Sbjct: 128 DMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGK 187

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
               +  +  G   K +  ++AI++G ++   +     +  F + +          ++ +
Sbjct: 188 RFVESLRVFQGIPEKNSVSWSAIIAGCVQN--NLLSLALKFFKEMQKVNAGVSQSIYASV 245

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           L   A+ + L  G  LHA+++K+ +AAD IV  A + MYAKC ++  A  +F    + + 
Sbjct: 246 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNR 305

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFN 589
            S+NAM++ Y+    G  ALLLF  +   G   D+IS+ GV +AC +  GLSEG      
Sbjct: 306 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG------ 359

Query: 590 EIEQIYGL--RPILEHFACM----VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
              QIY L  +  L    C+    +D+ G+   L+EA  + +     ++ + W  +++  
Sbjct: 360 --LQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA-VSWNAIIAAH 416

Query: 644 KLMANSKFSILASKRLL--DLEPKDAGSFILVSNMYA------GQGMLDEAAKVRTTMND 695
           +       ++     +L   +EP +   F   S + A      G GM   ++ V++ M  
Sbjct: 417 EQNGKGYETLFLFVSMLRSRIEPDE---FTFGSVLKACTGGSLGYGMEIHSSIVKSGMAS 473

Query: 696 LRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
              +   GCS I++ SK            E+E+I+S+ 
Sbjct: 474 ---NSSVGCSLIDMYSKCGMI-------EEAEKIHSRF 501


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/604 (32%), Positives = 340/604 (56%), Gaps = 2/604 (0%)

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G  +  LGI   M     +        +L+ C+ L     G ++HA  +KSG + N ++ 
Sbjct: 75  GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 134

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +L+SMY   G   +A  VF G+  +++     MI  +    ++  A+  +  +  +  +
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+  TF ++++       ++ G+++H    K G+  E  VG ++V MY K G   +A+ +
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD + E+N+++WT LI+GY + G    A+    +     +  +     +++ GC+    L
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           E G ++H + I+ GY  ++ +  AL+ +Y K G LK AR L      +    + A+++G+
Sbjct: 315 EHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGY 374

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +    DE   + LF + +  G++PD +TF+  L+  +S A L  G+S+H   +  GY+ 
Sbjct: 375 AQLGFHDE--AIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL 432

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           DV + +AL++MYAKCGS+D A  +F  +S+R++V+W AM++  A HG  + AL  FE+MK
Sbjct: 433 DVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMK 492

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
           ++G  PD ++   VL AC + GL E G   F  +   YG++P++EH++C VDLLGRAG L
Sbjct: 493 KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 552

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
            EA N+I + PF   P +W  L+S  ++ ++ +    A++ +L L+P D G+++ +SN+Y
Sbjct: 553 EEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIY 612

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           A  G  ++A KVR  M    + KE G SWIE+D K+H F    K HPE++EIY++L  L 
Sbjct: 613 AAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLT 672

Query: 738 DEMK 741
           +++K
Sbjct: 673 EQIK 676



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 247/480 (51%), Gaps = 20/480 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VHA +LKSG Q + +  N L+++YAK   L  A+++FDG+  R+ ++WT++I+ 
Sbjct: 112 LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEA 171

Query: 134 YLDDGD-------YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           ++           YE++    C       K ++ T   +L A +  E    G+++H    
Sbjct: 172 FVAGNQNLEAYKCYETMKLAGC-------KPDKVTFVSLLNAFTNPELLQVGQKVHMEIA 224

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K+G E    VGTSL+ MY   G   +A+ +F  L  K+V     +I  Y + G+ ++A  
Sbjct: 225 KAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALE 284

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +   +  ++  PN  T+T+++  C   L +E GK++H   ++ G  REI V NA++TMY 
Sbjct: 285 LLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYC 344

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  +EA ++F  +  R++++WTA+++GY + G   +AI+ F      GI  D     +
Sbjct: 345 KCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTS 404

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
            +  CS  + L+ G  +H   +  GY  DV L +ALV +YAK G +  AR++ +  S + 
Sbjct: 405 ALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERN 464

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              + A+++G  +     E   +  F Q +  G++PD VTF+ +LS       +  GR  
Sbjct: 465 VVAWTAMITGCAQHGRCRE--ALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK- 521

Query: 487 HAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
           H  S+   Y    +V +    + +  + G ++ A  +   +  +   S W A+LSA  +H
Sbjct: 522 HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIH 581


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/672 (31%), Positives = 364/672 (54%), Gaps = 6/672 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P + K   G  D++LG+AVHA  LK+G  +D F  N LI +Y K   ++ A K+F+ M  
Sbjct: 199 PCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRN 258

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF---NEHTCSVILEACSLLEDRIFG 178
           R+ ++W S++    ++G +    G+   +  SEE+    +  T   ++ AC+ + +   G
Sbjct: 259 RNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMG 318

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H  A K G    V V  SL+ MY   G   EA  +F     K+V   N +I  Y+K 
Sbjct: 319 MVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKE 378

Query: 239 GESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           G+    F +   +   +    N+ T  NV+  C     +   K++HG A + G +++  V
Sbjct: 379 GDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELV 438

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA V  Y K    + AER+F  +  + + SW ALI  + ++G  GK+++ FL  +D G+
Sbjct: 439 ANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGM 498

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   + +++  C+    L  G ++HGF +++G   D  +G +L+ +Y +   +   ++
Sbjct: 499 DPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKL 558

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +N +++GF +     E   +  F Q    G++P  +  + +L   +  
Sbjct: 559 IFDKMENKSLVCWNVMITGFSQNELPCE--ALDTFRQMLSGGIKPQEIAVTGVLGACSQV 616

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           + L  G+ +H++++K   + D  V  ALI MYAKCG ++ +  IF  ++++D   WN ++
Sbjct: 617 SALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVII 676

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y +HG G  A+ LFE M+ +G  PD  + LGVL AC ++GL   G+    +++ +YG+
Sbjct: 677 AGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGV 736

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
           +P LEH+AC+VD+LGRAG+L+EA+ L+N  P      +W +L+S  +   + +     SK
Sbjct: 737 KPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSK 796

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +LL+LEP  A +++L+SN+YAG G  DE  KVR  M +  L K+AGCSWIEI   ++ F+
Sbjct: 797 KLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFL 856

Query: 718 ASGKDHPESEEI 729
            S     ES++I
Sbjct: 857 VSDGSLSESKKI 868



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 234/473 (49%), Gaps = 13/473 (2%)

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFR 211
           S    ++    ++L AC   ++   G ++HA    S    N+V + T +I+MY   G   
Sbjct: 86  SSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPS 145

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVC 270
           ++  VF     KD+   N ++  Y++      A  +F+ LLS +D  P+++T   V   C
Sbjct: 146 DSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKAC 205

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
                VE G+ +H LA+K G   +  VGNA++ MYGK G  E A ++F+ +  RNL+SW 
Sbjct: 206 AGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWN 265

Query: 331 ALISGYVRSGHGGKAINGFLEFL---DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           +++     +G  G+    F   L   + G+  D + + TVI  C+    + +G+ +HG A
Sbjct: 266 SVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLA 325

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
            K G   +V +  +LVD+Y+K G L  AR L D    K    +N I+ G+  K  D    
Sbjct: 326 FKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGY-SKEGDFRGV 384

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
             +L   QR   +  + VT   +L   + +  L+  + +H Y+ + G+  D +V NA + 
Sbjct: 385 FELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVA 444

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
            YAKC S+D A ++F G+  + + SWNA++ A+A +G    +L LF  M   G  PD  +
Sbjct: 445 AYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFT 504

Query: 568 ILGVLQAC-----IYSGLSEGGICLFN--EIEQIYGLRPILEHFACMVDLLGR 613
           I  +L AC     +  G    G  L N  E+++  G+  +  +  C   LLG+
Sbjct: 505 IGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGK 557



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 248/518 (47%), Gaps = 26/518 (5%)

Query: 73  DLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           ++ +G+ VHA +  S   +ND   +  +I +Y+       ++ +FD    +    + +L+
Sbjct: 107 NIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALL 166

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GY  +  +   + +  ++  + +   ++ T   + +AC+ + D   GE +HA A+K+G 
Sbjct: 167 SGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGG 226

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            ++ FVG +LI+MY   G    A  VF  +  +++   N ++   ++ G       VF  
Sbjct: 227 FSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKR 286

Query: 251 LLSSDFE---PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           LL S+ E   P+  T   VI  C     V  G  +HGLA K G+  E++V N++V MY K
Sbjct: 287 LLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSK 346

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-----DLGICCDSS 362
            G   EA  +FD    +N++SW  +I GY + G       G  E L     +  +  +  
Sbjct: 347 CGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGD----FRGVFELLQEMQREEKVRVNEV 402

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +  V+  CS    L    ++HG+A +HG+L D  +  A V  YAK   L  A  +  G 
Sbjct: 403 TVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGM 462

Query: 423 SCKYTAEFNAIL-----SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
             K  + +NA++     +GF  K  D       LF     +GM+PD  T   LL   A  
Sbjct: 463 EGKTVSSWNALIGAHAQNGFPGKSLD-------LFLVMMDSGMDPDRFTIGSLLLACARL 515

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  G+ +H + ++ G   D  +G +L+++Y +C S+     IF  + ++ +V WN M+
Sbjct: 516 KFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMI 575

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           + ++ + L   AL  F +M   G  P +I++ GVL AC
Sbjct: 576 TGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGAC 613


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 215/697 (30%), Positives = 377/697 (54%), Gaps = 16/697 (2%)

Query: 53   ERTLLFNDWP--------QLVKISIGSGDLKLGQAVHAFLLKSG--SQNDTFEANNLINL 102
            E T L   WP        +L++  +  GD + G+AVH  +++SG  ++ D F AN L+N+
Sbjct: 415  ELTSLAFPWPGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNM 474

Query: 103  YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC 162
            Y K      A ++FDG+  R+ +++ +L++G+   G++E    +   +     + N+   
Sbjct: 475  YTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVL 534

Query: 163  SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
            + +L+    ++       +HA A K G + N FVG++LI  Y   G   +A  VF G+  
Sbjct: 535  TTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVG 594

Query: 223  KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI--SVCYENLGVEEGK 280
            KD      M+  Y++    E    +F  +  +  + N +  T+V+  +VC  ++ +  GK
Sbjct: 595  KDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVL--GK 652

Query: 281  QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
             +H  +VK     E  V  A++ MY K G  E+A   F+ ++  ++I W+ +IS Y +  
Sbjct: 653  GIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCN 712

Query: 341  HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
               +A   F+  +   +  +   L++V+  C+    L+LG Q+H  AIK G+ S++ +G 
Sbjct: 713  QNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGN 772

Query: 401  ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
            AL+D+YAK  D++S+  +           +N I+ G+ +  +   E  + +F + R A +
Sbjct: 773  ALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSK--SGFGEAALSVFREMRAASV 830

Query: 461  EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
                VT+S +L   AS A +     +H    K+ + +D IV N+LI  YAKCG I  A +
Sbjct: 831  PSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDARE 890

Query: 521  IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
            IF+ + + D+VSWNA++S YA+HG    A  LF+ M +     +DI+ + +L  C  +GL
Sbjct: 891  IFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGL 950

Query: 581  SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
               G+ LF+ +   +G+ P +EH+ C+V LLGRAGRL++A+N I   P + S ++WR L+
Sbjct: 951  VSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALL 1010

Query: 641  SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
            S   +  N +    +++++L++EP+D  +++L+SNMY+  G LD+ A  R +M ++ + K
Sbjct: 1011 SSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRK 1070

Query: 701  EAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
            E G SW+EI  ++H F    +DHP    I + L+ LN
Sbjct: 1071 EPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLN 1107


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/705 (30%), Positives = 381/705 (54%), Gaps = 8/705 (1%)

Query: 51  CSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD 110
           CS   L    +  L+        L+ G+ +H  +L    Q D    N+++++Y K   L 
Sbjct: 91  CSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLK 150

Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
            A+ +FD M +++ ++WTS+I GY   G+ ++ + +   M RS    +  T   I+++CS
Sbjct: 151 EARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCS 210

Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
            L+D     Q+HA  +KS F  ++    +LISMY       +A NVF  +  KD+     
Sbjct: 211 GLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGS 270

Query: 231 MILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
           MI  +++ G    A   F  +LS S ++PN++ F +  S C + L  + G+Q+HGL +KF
Sbjct: 271 MIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKF 330

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           G+  ++  G ++  MY K G  E A  +F  I + +L++W A+I+G+    +  ++ + F
Sbjct: 331 GLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFF 390

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
            +    G+  +   + +++  CS    L  G+Q+H + +K G+  D+ +  +L+ +Y+K 
Sbjct: 391 SQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKC 450

Query: 410 GDLKSARMLLDGFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            +L  A  + +    K     +N +L+  +++  +   +V+ L      + ++PD VT +
Sbjct: 451 SNLNDALQVFEDIGNKADIVSWNTLLTACLQQ--NQAGEVLRLTKLMFASRIKPDHVTLT 508

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L  S   A    G  +H + +K+G   D+ V NALI MY KCGS++ A ++F  I + 
Sbjct: 509 NVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNP 568

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           DI+SW++++  YA  G GK A  LF  M+  G  P++I+ +G+L AC + G+ E G+ L+
Sbjct: 569 DIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLY 628

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +++ Y + P  EH +CMVDLL RAG L  A + I   PF    ++W+TL++  K+  N
Sbjct: 629 RTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGN 688

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            +    A++ +L ++P ++ + +++ N++A  G   + A++R++M  + + K  G SWIE
Sbjct: 689 LEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIE 748

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFELQ 753
           I  K+H F+A    HPE  +IY+ L    +E+ L++ D     LQ
Sbjct: 749 IKDKVHVFLAEDNLHPERGKIYTML----EELMLQILDDGCDPLQ 789


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/680 (31%), Positives = 376/680 (55%), Gaps = 5/680 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH++++KSG   D +   +L+ LYAK   +D A+ +FDG+++++ +TWT++I GY  
Sbjct: 161 GSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTK 220

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G  E  L +   M  S    +++  S IL ACS+L     G+QIHA+ ++S  + +V  
Sbjct: 221 SGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVST 280

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              LI  Y   G  +  + +F  L  K++     MI  Y +      A  +   +    +
Sbjct: 281 YNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGW 340

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +P++Y  ++V++ C     ++ G+Q+H   +K  +  +  V NA++ MY K    ++A+R
Sbjct: 341 KPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKR 400

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD ++  +++ + A+I GY R G+   A+  F E     +        +++   +    
Sbjct: 401 VFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLC 460

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L+L  Q+HG  IK+G+  D    +AL+D+Y+K   ++ AR + +G + K    +N++ SG
Sbjct: 461 LQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSG 520

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           +  ++    E+   L+S  +L+   P+  TF+ L + ++  A L  G+  H   +K G  
Sbjct: 521 YNLQL--KSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLE 578

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           +D  + NAL+ MYAKCGS++ A +IF     +D   WN+M+S YA HG  + AL +FE M
Sbjct: 579 SDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETM 638

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
                 P+ ++ + VL AC + G  E G+  +N + + YG+ P +EH+A +V LLGRAGR
Sbjct: 639 VSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGR 697

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L+EA   I       + L+WR+L+S  ++  N + +  A++  + ++P D+GS++++SN+
Sbjct: 698 LTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNI 757

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           +A +GM  +  ++R  M+   + KE G SWIE++ ++H FV+  K H E++ IY  LD L
Sbjct: 758 FASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDEL 817

Query: 737 NDEMKLK--VKDSSAFELQD 754
             +MK    V D++  E+ D
Sbjct: 818 TTQMKDVGCVHDTTILEMID 837



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 292/568 (51%), Gaps = 9/568 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + VH  ++  G Q D F +N L++ Y K   +  A  LFD M  R+ ++W+S++  Y   
Sbjct: 60  RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119

Query: 138 GDYESVLGIACDMYRS-EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           G  E  L    +  R+  +K NE+  + I+ AC   +    G Q+H++ IKSGF  +V+V
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYV 179

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GTSL+ +Y   G   +A  VF GL  K       +I  Y K+G SE++  +F  ++ S+ 
Sbjct: 180 GTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNV 239

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ Y  +++++ C     ++ GKQ+H   ++     ++S  N ++  Y K G  +  + 
Sbjct: 240 IPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKA 299

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD +  +N+ISWT +I+GY+++ +  +A+    E   +G   D    ++V+  C     
Sbjct: 300 LFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDA 359

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L+ G Q+H + IK     D  +  AL+D+Y+K   L  A+ + D  +C     +NA++ G
Sbjct: 360 LQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEG 419

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           +  +        + +F + RL  + P  +TF  LL LSA+  CL   + +H   IK G++
Sbjct: 420 YSRQ--GYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFS 477

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            D    +ALI +Y+KC  I  A  +F+G +++DIV WN++ S Y L    + A  L+ ++
Sbjct: 478 LDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDL 537

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR--PILEHFACMVDLLGRA 614
           +     P++ +   +  A         G    N++ ++ GL   P + +   +VD+  + 
Sbjct: 538 QLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKM-GLESDPFITN--ALVDMYAKC 594

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSV 642
           G + EA  + +SS + ++   W +++S+
Sbjct: 595 GSVEEAEKIFSSSVWKDTA-CWNSMISM 621



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 201/389 (51%), Gaps = 3/389 (0%)

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
           ++  ++H   +  G + +VF+   L+  YF  G   +A  +F  +  +++   + ++  Y
Sbjct: 57  LYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMY 116

Query: 236 NKAGESEMAFHVFVHLLSSDFEP-NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
            + G +E A   F+    +  +  N+Y   ++I  C +  G E G Q+H   +K G   +
Sbjct: 117 TQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGED 176

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
           + VG ++V +Y KHG  ++A  +FD +  +  ++WTA+I+GY +SG    ++  F   ++
Sbjct: 177 VYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMME 236

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             +  D   L+++++ CSV   L+ G Q+H + ++     DV     L+D Y K G +K+
Sbjct: 237 SNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKA 296

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            + L D    K    +  +++G+M+   D E   + L  +    G +PD    S +L+  
Sbjct: 297 GKALFDRLDVKNIISWTTMIAGYMQNSYDWE--AVELVGEMFRMGWKPDEYACSSVLTSC 354

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
            S   L  GR +H+Y IK     D  V NALI MY+KC ++D A ++F  ++   +V +N
Sbjct: 355 GSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYN 414

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAP 563
           AM+  Y+  G   GAL +F+EM+ +  +P
Sbjct: 415 AMIEGYSRQGYLCGALEVFQEMRLKHVSP 443



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 242/485 (49%), Gaps = 25/485 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G LK G+ +HA++L+S ++ D    N LI+ Y K  R+   + LFD + V++ I+WT++I
Sbjct: 257 GYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMI 316

Query: 132 KGYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GY+ +  D+E+V  +  +M+R   K +E+ CS +L +C  ++    G QIH++ IK   
Sbjct: 317 AGYMQNSYDWEAV-ELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCL 375

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E++ FV  +LI MY       +A+ VF  +    V   N MI  Y++ G    A  VF  
Sbjct: 376 EHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQE 435

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +      P+  TF +++ +    L ++  KQ+HGL +K+G   +    +A++ +Y K   
Sbjct: 436 MRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSC 495

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS---CLATV 367
             +A  +F+  + ++++ W +L SGY       K+   F  + DL +  +       A +
Sbjct: 496 IRDARYVFEGTTNKDIVVWNSLFSGY---NLQLKSEEAFKLYSDLQLSRERPNEFTFAAL 552

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
               S+ ++L  G Q H   +K G  SD  +  ALVD+YAK G ++ A  +      K T
Sbjct: 553 TTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDT 612

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG---- 483
           A +N+++S + +      E+ + +F       + P+ VTF  +LS  +    +  G    
Sbjct: 613 ACWNSMISMYAQH--GKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHY 670

Query: 484 RSLHAYSIKTG---YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD-IVSWNAMLSA 539
            S+  Y I+ G   YA       +++T+  + G +  A +  + ++ R   + W ++LSA
Sbjct: 671 NSMARYGIEPGIEHYA-------SVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSA 723

Query: 540 YALHG 544
             + G
Sbjct: 724 CRVFG 728



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 6/206 (2%)

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F   I+ + + ++  FS Q +   +      + LL    S   ++  R +H   +  G  
Sbjct: 16  FFSSISPNVQPMLPSFSSQNV---KVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQ 72

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            DV + N L+  Y K GS+  A  +F  + +R++VSW++++S Y   G  + ALL F E 
Sbjct: 73  YDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEF 132

Query: 557 KREGFAPDDISILG-VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           +R      +  IL  +++AC+     E G  + + + +  G    +     +V L  + G
Sbjct: 133 QRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIK-SGFGEDVYVGTSLVVLYAKHG 191

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVS 641
            + +A  L+      ++P+ W  +++
Sbjct: 192 EIDKA-RLVFDGLVLKTPVTWTAIIT 216


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 217/670 (32%), Positives = 367/670 (54%), Gaps = 2/670 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  ++ L   VH      G   D F  + LI LYA    +  A+++FD + 
Sbjct: 115 FPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELP 174

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           +R  I W  +++GY+  GD+++ +G  C+M  S    N  T + IL  C+   +   G Q
Sbjct: 175 LRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQ 234

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H   I SGFE +  V  +L++MY   G    A  +F  +   D    N +I  Y + G 
Sbjct: 235 LHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGF 294

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           ++ A  +F  ++S+  +P+  TF + +    E+  +   K++H   V+  V  ++ + +A
Sbjct: 295 TDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSA 354

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G  E A ++F      ++   TA+ISGYV  G    AIN F   +  G+  +
Sbjct: 355 LIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTN 414

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  +A+V+  C+  + L+ G +LH   +K    + V +G+A+ D+YAK G L  A     
Sbjct: 415 SLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFR 474

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             S + +  +N+++S F +      E  + LF Q  ++G + D V+ S  LS +A+   L
Sbjct: 475 RMSDRDSVCWNSMISSFSQN--GKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPAL 532

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H Y I+  +++D  V + LI MY+KCG++  A+ +F  +  ++ VSWN++++AY
Sbjct: 533 YYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAY 592

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG  +  L L+ EM R G  PD ++ L ++ AC ++GL + GI  F+ + + YG+   
Sbjct: 593 GNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGAR 652

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+ACMVDL GRAGR+ EA + I S PF+    +W TL+   +L  N + + LAS+ LL
Sbjct: 653 MEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLL 712

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L+PK++G ++L+SN++A  G      KVR+ M +  + K  G SWI+++   H F A+ 
Sbjct: 713 ELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAAD 772

Query: 721 KDHPESEEIY 730
            +HPES EIY
Sbjct: 773 GNHPESVEIY 782



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 247/493 (50%), Gaps = 2/493 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++  + VH  ++  G  +    ++ ++ LY    R   A  LF  + +R A+ W  +I+G
Sbjct: 27  VQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRG 86

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               G ++  L     M  S    +++T   +++AC  L +      +H  A   GF  +
Sbjct: 87  LYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVD 146

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +F G++LI +Y  +G  R+A  VF  L  +D    N M+  Y K+G+ + A   F  + +
Sbjct: 147 LFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRT 206

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           S    N  T+T ++S+C        G QLHGL +  G   +  V N +V MY K G    
Sbjct: 207 SYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLY 266

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++F+ + + + ++W  LI+GYV++G   +A   F   +  G+  DS   A+ +     
Sbjct: 267 ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILE 326

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +L    ++H + ++H    DV L +AL+D+Y KGGD++ AR +         A   A+
Sbjct: 327 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAM 386

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SG++  +     D +  F      GM  + +T + +L   A+ A L  G+ LH + +K 
Sbjct: 387 ISGYV--LHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKK 444

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
                V VG+A+  MYAKCG +D A++ F+ +SDRD V WN+M+S+++ +G  + A+ LF
Sbjct: 445 RLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLF 504

Query: 554 EEMKREGFAPDDI 566
            +M   G   D +
Sbjct: 505 RQMGMSGAKFDSV 517



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 218/477 (45%), Gaps = 4/477 (0%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +  ACS         Q+H   I  G  +     + ++ +Y   G FR+A N+F  L  + 
Sbjct: 17  LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
               N+MI      G  + A   +  +L S+  P+ YTF  VI  C     V     +H 
Sbjct: 77  ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            A   G   ++  G+A++ +Y  +G   +A R+FD +  R+ I W  ++ GYV+SG    
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           AI  F E        +S     ++  C+   N   G QLHG  I  G+  D ++   LV 
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y+K G+L  AR L +      T  +N +++G+++    DE     LF+    AG++PD 
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDE--AAPLFNAMISAGVKPDS 314

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           VTF+  L        L   + +H+Y ++     DV + +ALI +Y K G ++ A +IF+ 
Sbjct: 315 VTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQ 374

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
               D+    AM+S Y LHGL   A+  F  + +EG   + +++  VL AC      + G
Sbjct: 375 NILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPG 434

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             L   I +   L  I+   + + D+  + GRL  A          +S + W +++S
Sbjct: 435 KELHCHILK-KRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDS-VCWNSMIS 489



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 151/315 (47%), Gaps = 2/315 (0%)

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           ++   C +   V++ +Q+H   +  G+    +  + ++ +Y   G   +A  +F  +  R
Sbjct: 16  SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
             + W  +I G    G    A+  + + L   +  D      VI  C   +N+ L + +H
Sbjct: 76  YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
             A   G+  D+  G+AL+ +YA  G ++ AR + D    + T  +N +L G+++  + D
Sbjct: 136 DTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVK--SGD 193

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
            ++ +  F + R +    + VT++ +LS+ A++     G  LH   I +G+  D  V N 
Sbjct: 194 FDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANT 253

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           L+ MY+KCG++  A ++F  +   D V+WN +++ Y  +G    A  LF  M   G  PD
Sbjct: 254 LVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 313

Query: 565 DISILGVLQACIYSG 579
            ++    L + + SG
Sbjct: 314 SVTFASFLPSILESG 328



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 24/288 (8%)

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L ++   CS  S ++   Q+H   I  G        + ++ +Y   G  + A  L     
Sbjct: 14  LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE 73

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL-AGMEPDPVTFSRLLS----LSASQA 478
            +Y   +N ++ G          D  +LF  + L + + PD  TF  ++     L+    
Sbjct: 74  LRYALPWNWMIRGLYML---GWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL 130

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
           C+V    +H  +   G+  D+  G+ALI +YA  G I  A ++F  +  RD + WN ML 
Sbjct: 131 CMV----VHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLR 186

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI---- 594
            Y   G    A+  F EM+      + ++   +L  C     + G  C   ++  +    
Sbjct: 187 GYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICA----TRGNFCAGTQLHGLVIGS 242

Query: 595 -YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            +   P + +   +V +  + G L  A  L N+ P +++ + W  L++
Sbjct: 243 GFEFDPQVAN--TLVAMYSKCGNLLYARKLFNTMPQTDT-VTWNGLIA 287


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/660 (33%), Positives = 348/660 (52%), Gaps = 22/660 (3%)

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF----NEHTCS 163
           +L +A+++FD +    A  + +LI+ Y   G + +    A D+YRS  +F    N++T  
Sbjct: 49  QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHA----AIDLYRSMLRFRVAPNKYTFP 104

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
            +L+ACS L D   G  IHA A  +G   ++FV T+LI +Y     F  A NVF  +  +
Sbjct: 105 FVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR 164

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSD----FEPNDYTFTNVISVCYENLGVEEG 279
           DV   N M+  Y   G   M  H   HLL         PN  T  +++ +  ++  + +G
Sbjct: 165 DVVAWNAMLAGYANHG---MYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221

Query: 280 KQLHGLAVKFGVVR---EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
             +H   ++  + +   ++ +G A++ MY K      A R+F  +  RN ++W+ALI G+
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGF 281

Query: 337 VRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           V      +A N F + L  G+C   ++ +A+ +  C+  ++L +G QLH    K G  +D
Sbjct: 282 VLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHAD 341

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           +    +L+ +YAK G +  A M  D  + K T  + A+LSG ++      E+  ++F + 
Sbjct: 342 LTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN--GKAEEAFLVFKKM 399

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           +   MEPD  T   L+   +  A L  G+  H   I  G A +  + N+LI MYAKCG I
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKI 459

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           D + Q+F  +  RD+VSWN M++ Y +HGLGK A  LF  MK +GFAPDD++ + ++ AC
Sbjct: 460 DLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAAC 519

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            +SGL   G   F+ +   YG+ P +EH+ CMVDLL R G L EA   I S P      +
Sbjct: 520 SHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRV 579

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W  L+   ++  N       S+ +  L P+  G+F+L+SN+++  G  DEAA+VR     
Sbjct: 580 WGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKV 639

Query: 696 LRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD-LLNDEMKLKVKDSSAFELQD 754
               K  G SWIEI+  LH FV   + HP S +IY +LD ++ D  KL  +  ++F LQD
Sbjct: 640 KGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQD 699



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 238/517 (46%), Gaps = 26/517 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      DL+ G+ +HA    +G   D F +  LI+LY +  R   A+ +F  M 
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGE 179
           +R  + W +++ GY + G Y   +    DM      + N  T   +L   +       G 
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222

Query: 180 QIHAFAIKSGFENN---VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            IHA+ +++  E N   V +GT+L+ MY        A  VF G+  ++    + +I  + 
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282

Query: 237 KAGESEMAFHVFVHLLSSDF-EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
                  AF++F  +L       +  +  + + VC     +  G QLH L  K G+  ++
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           +  N++++MY K G+  EA   FD I+ ++ IS+ AL+SG V++   GKA   FL F  +
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN---GKAEEAFLVFKKM 399

Query: 356 GIC---CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
             C    D + + ++I  CS  + L+ G   HG  I  G   +  +  +L+D+YAK G +
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKI 459

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             +R + D    +    +N +++G+   I    ++   LF   +  G  PD VTF  L++
Sbjct: 460 DLSRQVFDKMPARDVVSWNTMIAGY--GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517

Query: 473 LSASQACLVRGRS-----LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
             +    +  G+       H Y I       +     ++ + A+ G +D A+Q  + +  
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEAYQFIQSMPL 573

Query: 528 R-DIVSWNAMLSAYALHG---LGKGALLLFEEMKREG 560
           + D+  W A+L A  +H    LGK    + +++  EG
Sbjct: 574 KADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEG 610



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 211/448 (47%), Gaps = 13/448 (2%)

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           +  +   G    A  VF  +   D R  N +I  Y+  G    A  ++  +L     PN 
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           YTF  V+  C   + +  G+ +H  A   G+  ++ V  A++ +Y +      A  +F  
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLEL 379
           +  R++++W A+++GY   G    AI   L+  D  G+  ++S L +++   +    L  
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 380 GLQLHGFAIK---HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           G  +H + ++         V +GTAL+D+YAK   L  A  +  G   +    ++A++ G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 437 FMEKIADDEEDVMVLFSQQRLAGM-EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           F+  + D   +   LF    + G+      + +  L + AS A L  G  LHA   K+G 
Sbjct: 281 FV--LCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGI 338

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            AD+   N+L++MYAK G I+ A   F  I+ +D +S+ A+LS    +G  + A L+F++
Sbjct: 339 HADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKK 398

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC--MVDLLGR 613
           M+     PD  +++ ++ AC +    + G C    +  I GL   LE   C  ++D+  +
Sbjct: 399 MQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV-IIRGL--ALETSICNSLIDMYAK 455

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVS 641
            G++  +  + +  P +   + W T+++
Sbjct: 456 CGKIDLSRQVFDKMP-ARDVVSWNTMIA 482


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/660 (33%), Positives = 348/660 (52%), Gaps = 22/660 (3%)

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF----NEHTCS 163
           +L +A+++FD +    A  + +LI+ Y   G + +    A D+YRS  +F    N++T  
Sbjct: 49  QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHA----AIDLYRSMLRFRVAPNKYTFP 104

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
            +L+ACS L D   G  IHA A  +G   ++FV T+LI +Y     F  A NVF  +  +
Sbjct: 105 FVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR 164

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSD----FEPNDYTFTNVISVCYENLGVEEG 279
           DV   N M+  Y   G   M  H   HLL         PN  T  +++ +  ++  + +G
Sbjct: 165 DVVAWNAMLAGYANHG---MYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221

Query: 280 KQLHGLAVKFGVVR---EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
             +H   ++  + +   ++ +G A++ MY K      A R+F  +  RN ++W+ALI G+
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGF 281

Query: 337 VRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           V      +A N F + L  G+C   ++ +A+ +  C+  ++L +G QLH    K G  +D
Sbjct: 282 VLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHAD 341

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           +    +L+ +YAK G +  A M  D  + K T  + A+LSG ++      E+  ++F + 
Sbjct: 342 LTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN--GKAEEAFLVFKKM 399

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           +   MEPD  T   L+   +  A L  G+  H   I  G A +  + N+LI MYAKCG I
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKI 459

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           D + Q+F  +  RD+VSWN M++ Y +HGLGK A  LF  MK +GFAPDD++ + ++ AC
Sbjct: 460 DLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAAC 519

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            +SGL   G   F+ +   YG+ P +EH+ CMVDLL R G L EA   I S P      +
Sbjct: 520 SHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRV 579

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W  L+   ++  N       S+ +  L P+  G+F+L+SN+++  G  DEAA+VR     
Sbjct: 580 WGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKV 639

Query: 696 LRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD-LLNDEMKLKVKDSSAFELQD 754
               K  G SWIEI+  LH FV   + HP S +IY +LD ++ D  KL  +  ++F LQD
Sbjct: 640 KGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQD 699



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 238/517 (46%), Gaps = 26/517 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      DL+ G+ +HA    +G   D F +  LI+LY +  R   A+ +F  M 
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGE 179
           +R  + W +++ GY + G Y   +    DM      + N  T   +L   +       G 
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222

Query: 180 QIHAFAIKSGFENN---VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            IHA+ +++  E N   V +GT+L+ MY        A  VF G+  ++    + +I  + 
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282

Query: 237 KAGESEMAFHVFVHLLSSDF-EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
                  AF++F  +L       +  +  + + VC     +  G QLH L  K G+  ++
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           +  N++++MY K G+  EA   FD I+ ++ IS+ AL+SG V++   GKA   FL F  +
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN---GKAEEAFLVFKKM 399

Query: 356 GIC---CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
             C    D + + ++I  CS  + L+ G   HG  I  G   +  +  +L+D+YAK G +
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKI 459

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             +R + D    +    +N +++G+   I    ++   LF   +  G  PD VTF  L++
Sbjct: 460 DLSRQVFDKMPARDVVSWNTMIAGY--GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517

Query: 473 LSASQACLVRGRS-----LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
             +    +  G+       H Y I       +     ++ + A+ G +D A+Q  + +  
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEAYQFIQSMPL 573

Query: 528 R-DIVSWNAMLSAYALHG---LGKGALLLFEEMKREG 560
           + D+  W A+L A  +H    LGK    + +++  EG
Sbjct: 574 KADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEG 610


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 232/681 (34%), Positives = 369/681 (54%), Gaps = 20/681 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGML--VRSAITWTSL 130
           + G A+H + LKSG+ + T  +N+LI  Y    R  L  A  +F  +   +R   +W SL
Sbjct: 31  RAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSL 90

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFGEQIHAFAIK- 187
           +   L      + L     M  S +      H+ + +  A + +     G   HAFA K 
Sbjct: 91  LNP-LSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKL 149

Query: 188 --SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
             S   NNVFV T+L++MY   G   +A  VF  + +++      M+  Y     SE AF
Sbjct: 150 PSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAF 209

Query: 246 HVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            +F  +L     E N++  T V+S     LG+  G QLHGL +K G+V  +SV N++VTM
Sbjct: 210 ELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTM 269

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K    + A  +F +  ERN I+W+A+I+GY ++G    A   FL+    G        
Sbjct: 270 YAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTF 329

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
             +++  S    L +G Q HG  +K G+   V + +ALVD+YAK G    A+   DGF  
Sbjct: 330 VGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAK---DGFHQ 386

Query: 425 KYTAE----FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            Y  +    + A+++G ++    + E+ ++L+S+    G+ P  +T + +L   A  A L
Sbjct: 387 LYDVDDVVIWTAMITGHVQN--GEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAAL 444

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ LHA  +K G+     VG AL TMY+KCG+++ +  +F+ + DRDI+SWN+++S +
Sbjct: 445 EPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGF 504

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           + HG G+ AL LFEEMK EG APD I+ + VL AC + GL + G   F  + + YGL P 
Sbjct: 505 SQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPK 564

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           L+H+AC+VD+L RAG+L EA + I S        LWR ++   + + +      A ++L+
Sbjct: 565 LDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLM 624

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L  +D+ ++IL+SN+YA Q   ++  +VR  M    +SK+ GCSW+E++++++ FV   
Sbjct: 625 ELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGE 684

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
           + HPE+E+I  +L  L   MK
Sbjct: 685 QQHPEAEKINVELIRLAKHMK 705



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 228/503 (45%), Gaps = 26/503 (5%)

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY------FH 206
           S  +F EH    +  A S +  R  G+ +H +A+KSG  ++  V  SLI+ Y        
Sbjct: 12  SHAQFIEH----LRCAASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLL 67

Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD-FEPNDYTFTN 265
              F    ++  GL  +DV   N ++   ++        H    + S+D   P  ++F  
Sbjct: 68  GAAFAVFADIPAGL--RDVASWNSLLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAA 125

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGV---VREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           V +          G   H  A K         + V  A++ MY K G   +A R+FD + 
Sbjct: 126 VFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMP 185

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT-VIDGCSVCSNLELGL 381
            RN +SW A++SGY       +A   F   L       +  +AT V+   SV   L +G+
Sbjct: 186 HRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGV 245

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           QLHG  +K G +  V +  +LV +YAK   + +A  +      + +  ++A+++G+ +  
Sbjct: 246 QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQ-- 303

Query: 442 ADDEED-VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
            + E D    +F Q   AG  P   TF  +L+ S+    LV G+  H   +K G+   V 
Sbjct: 304 -NGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVY 362

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
           V +AL+ MYAKCG    A   F  + D  D+V W AM++ +  +G  + AL+L+  M +E
Sbjct: 363 VKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKE 422

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI-YGLRPILEHFACMVDLLGRAGRLS 618
           G  P  +++  VL+AC      E G  L  +I +  +GL   +     +  +  + G L 
Sbjct: 423 GVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVG--TALSTMYSKCGNLE 480

Query: 619 EAMNLINSSPFSESPLLWRTLVS 641
           ++M +    P     + W +++S
Sbjct: 481 DSMVVFRRMP-DRDIISWNSIIS 502



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 184/382 (48%), Gaps = 3/382 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L  +S+  G L +G  +H  +LK G        N+L+ +YAK   +D A  +F     R+
Sbjct: 232 LSAVSVPLG-LLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERN 290

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +ITW+++I GY  +G+ +    +   M+ +     E T   IL A S +   + G+Q H 
Sbjct: 291 SITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHG 350

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESE 242
             +K GFE  V+V ++L+ MY   GC  +A++ F  L    DV     MI  + + GE E
Sbjct: 351 LMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHE 410

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  ++  +      P+  T T+V+  C     +E GKQLH   +K G     SVG A+ 
Sbjct: 411 EALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALS 470

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
           TMY K G  E++  +F  + +R++ISW ++ISG+ + G G  A++ F E    GI  D  
Sbjct: 471 TMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHI 530

Query: 363 CLATVIDGCSVCSNLELG-LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
               V+  CS    ++ G       +  +G +  +     +VDI ++ G LK A+  ++ 
Sbjct: 531 TFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIES 590

Query: 422 FSCKYTAEFNAILSGFMEKIAD 443
            +  +      I+ G    + D
Sbjct: 591 ITIDHGTCLWRIVLGACRSLRD 612


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 229/704 (32%), Positives = 378/704 (53%), Gaps = 15/704 (2%)

Query: 49  VSCSERTLLFNDWPQLVKISI--------GSGDLKLGQAVHAFLLKSGSQNDTFEANNLI 100
           V C  R L+F   P    +SI        G+   + G+ +H F+L++    D+F    LI
Sbjct: 153 VGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALI 212

Query: 101 NLYAKFNRLDVAQKLFDGMLVRS-AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
           ++Y KF     A ++F  +  +S  + W  +I G+   G  ES L +      +  K   
Sbjct: 213 DMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVS 272

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
            + +  L ACS  E+  FG QIH   +K G  N+ +V TSL+SMY   G   EAE VF  
Sbjct: 273 TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSC 332

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE- 278
           +  K +   N M+  Y +      A  +F  +      P+ +T +NVIS C   LG+   
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC-SVLGLYNY 391

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           GK +H    K  +    ++ +A++T+Y K G   +A  +F ++ E+++++W +LISG  +
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451

Query: 339 SGHGGKAINGF--LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           +G   +A+  F  ++  D  +  DS  + +V + C+    L  GLQ+HG  IK G + +V
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +G++L+D+Y+K G  + A  +    S +    +N+++S +     +  E  + LF+   
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN--NLPELSIDLFNLML 569

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
             G+ PD V+ + +L   +S A L++G+SLH Y+++ G  +D  + NALI MY KCG   
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A  IFK +  + +++WN M+  Y  HG    AL LF+EMK+ G +PDD++ L ++ AC 
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
           +SG  E G  +F  ++Q YG+ P +EH+A MVDLLGRAG L EA + I + P      +W
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             L+S S+   N +  IL++++LL +EP+   +++ + N+Y   G+ +EAAK+   M + 
Sbjct: 750 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
            L K+ GCSWIE+  + + F + G   P   EI++ L+ L   M
Sbjct: 810 GLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 257/526 (48%), Gaps = 14/526 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD--- 117
           +P L+K      +L  G+ +H  ++  G + D F A +L+N+Y K   LD A ++FD   
Sbjct: 63  FPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 122

Query: 118 ----GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
               G+  R    W S+I GY     ++  +G    M     + +  + S+++       
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182

Query: 174 D--RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNF 230
           +  R  G+QIH F +++  + + F+ T+LI MYF  G   +A  VF  +  K +V   N 
Sbjct: 183 NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
           MI+ +  +G  E +  +++   ++  +    +FT  +  C ++     G+Q+H   VK G
Sbjct: 243 MIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
           +  +  V  ++++MY K GM  EAE +F  + ++ L  W A+++ Y  + +G  A++ F 
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
                 +  DS  L+ VI  CSV      G  +H    K    S   + +AL+ +Y+K G
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG 422

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR--LAGMEPDPVTFS 468
               A ++      K    + +++SG  +      ++ + +F   +     ++PD    +
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCKN--GKFKEALKVFGDMKDDDDSLKPDSDIMT 480

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            + +  A    L  G  +H   IKTG   +V VG++LI +Y+KCG  + A ++F  +S  
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           ++V+WN+M+S Y+ + L + ++ LF  M  +G  PD +SI  VL A
Sbjct: 541 NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 187/403 (46%), Gaps = 24/403 (5%)

Query: 215 NVFRGL-----AYKDVRCVNFMILEYNKAGESEMAFHVFV-HLLSSDFEPNDYTFTNVIS 268
           ++ RGL     +Y     +N  I    + GE   A H++  H  SS F  + +TF +++ 
Sbjct: 9   HIRRGLCCVADSYISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLK 68

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD-------AI 321
            C     +  GK +HG  V  G   +  +  ++V MY K G  + A ++FD        +
Sbjct: 69  ACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGV 128

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL--EL 379
           S R++  W ++I GY +     + +  F   L  G+  D+  L+ V+       N   E 
Sbjct: 129 SARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE 188

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGG-DLKSARMLLDGFSCKYTAEFNAILSGF- 437
           G Q+HGF +++   +D  L TAL+D+Y K G  + + R+ ++         +N ++ GF 
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
              I +   D+ +L     +  +     +F+  L   +       GR +H   +K G   
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVS---TSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D  V  +L++MY+KCG +  A  +F  + D+ +  WNAM++AYA +  G  AL LF  M+
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           ++   PD  ++  V+  C   GL   G  +  E+ +    RPI
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK----RPI 404


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 218/681 (32%), Positives = 367/681 (53%), Gaps = 10/681 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G  VHA  +K G ++  + A++LIN+Y K    D A+++FD +  ++ I W +++  
Sbjct: 233 LNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGV 292

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G   +V+ +  DM       +E T + IL  C+  E    G Q+H+  IK  F +N
Sbjct: 293 YSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSN 352

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FV  +LI MY  +G  +EA   F  + Y+D    N +I+ Y +      AF +F  ++ 
Sbjct: 353 LFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMIL 412

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P++ +  +++S C     +E G+Q H L+VK G+   +  G++++ MY K G  ++
Sbjct: 413 DGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKD 472

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A + + ++ ER+++S  ALI+GY    +  ++IN   E   LG+       A++ID C  
Sbjct: 473 AHKTYSSMPERSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKG 531

Query: 374 CSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFN 431
            + + LGLQ+H   +K G L     LGT+L+ +Y     L  A +L   FS  K    + 
Sbjct: 532 SAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWT 591

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A++SG ++    D    + L+ + R   + PD  TF  +L   A  + L  GR +H+   
Sbjct: 592 ALISGHIQNECSDV--ALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIF 649

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHGLGKGAL 550
            TG+  D +  +AL+ MYAKCG +  + Q+F+ + + +D++SWN+M+  +A +G  K AL
Sbjct: 650 HTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCAL 709

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            +F+EM +    PDD++ LGVL AC ++G    G  +F+ +   YG+ P ++H+ACMVDL
Sbjct: 710 KVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDL 769

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGR G L EA   I+      + ++W  L+   ++  + K    A+K+L++LEP+ +  +
Sbjct: 770 LGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPY 829

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           +L+SNMYA  G  DEA  +R TM    + K  GCSWI +  + + FVA    H   +EI 
Sbjct: 830 VLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEIS 889

Query: 731 SKLDLLNDEMKLKVKDSSAFE 751
             L      +   +KD++ F+
Sbjct: 890 KAL----KHLTALIKDNNRFQ 906



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/549 (28%), Positives = 278/549 (50%), Gaps = 15/549 (2%)

Query: 47  SSVSCSERTLLFNDWPQLVKIS---IGSGDLKLG---QAVHAF-LLKSGSQNDTFEANNL 99
           +S++C+        +P L  +S   + SG ++ G   +A+H F  +++ +  D      +
Sbjct: 96  NSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTV 155

Query: 100 INLYAKFNRLDVAQKLFDGMLV--RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF 157
           +N Y    +LD A +LF  M +  R+ + W  +I G+     YE  L     M +   K 
Sbjct: 156 LNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKS 215

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +  T + +L A + L     G  +HA AIK GFE++++V +SLI+MY       +A  VF
Sbjct: 216 SRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVF 275

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             ++ K++   N M+  Y++ G       +F+ ++S    P+++T+T+++S C     +E
Sbjct: 276 DAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLE 335

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
            G+QLH   +K      + V NA++ MY K G  +EA + F+ ++ R+ ISW A+I GYV
Sbjct: 336 VGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYV 395

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           +      A + F   +  GI  D   LA+++  C     LE G Q H  ++K G  +++ 
Sbjct: 396 QEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLF 455

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
            G++L+D+Y+K GD+K A         +     NA+++G+  K  + +E + +L   Q L
Sbjct: 456 AGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALK--NTKESINLLHEMQIL 513

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAADVIVGNALITMYAKCGSID 516
            G++P  +TF+ L+ +    A ++ G  +H   +K G       +G +L+ MY     + 
Sbjct: 514 -GLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLA 572

Query: 517 GAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            A  +F   S  + IV W A++S +  +     AL L+ EM+    +PD  + + VLQAC
Sbjct: 573 DANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQAC 632

Query: 576 -IYSGLSEG 583
            + S L +G
Sbjct: 633 ALLSSLHDG 641



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 249/507 (49%), Gaps = 43/507 (8%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR--SAITWTSL 130
           +L LG+AVH+ ++KSG ++ +F    LI+LYAK N L  A+ +F          ++WT+L
Sbjct: 62  NLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTAL 121

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY+  G     L I          F++   S + +  +L+                  
Sbjct: 122 ISGYVQAGLPHEALHI----------FDKMRNSAVPDQVALV------------------ 153

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFHVF 248
                   ++++ Y   G   +A  +F+ +    ++V   N MI  + K    E A   F
Sbjct: 154 --------TVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFF 205

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +     + +  T  +V+S       +  G  +H  A+K G    I V ++++ MYGK 
Sbjct: 206 HQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKC 265

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
            M ++A ++FDAIS++N+I W A++  Y ++G     +  FL+ +  GI  D     +++
Sbjct: 266 QMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSIL 325

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+    LE+G QLH   IK  + S++ +  AL+D+YAK G LK A    +  + +   
Sbjct: 326 STCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHI 385

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +NAI+ G++++  + E     LF +  L G+ PD V+ + +LS   +   L  G+  H 
Sbjct: 386 SWNAIIVGYVQE--EVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHC 443

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            S+K G   ++  G++LI MY+KCG I  A + +  + +R +VS NA+++ YAL    K 
Sbjct: 444 LSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNT-KE 502

Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC 575
           ++ L  EM+  G  P +I+   ++  C
Sbjct: 503 SINLLHEMQILGLKPSEITFASLIDVC 529



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 254/542 (46%), Gaps = 67/542 (12%)

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
           E VL        S    ++ T +V L AC+ L++   G  +H+  IKSG E+  F   +L
Sbjct: 29  ERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGAL 88

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNF--MILEYNKAGESEMAFHVFVHLLSSDFEP 258
           I +Y        A  +F    +  +  V++  +I  Y +AG    A H+F  + +S   P
Sbjct: 89  IHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-P 147

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +      V+                               NA +++    G  ++A ++F
Sbjct: 148 DQVALVTVL-------------------------------NAYISL----GKLDDACQLF 172

Query: 319 D--AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
               I  RN+++W  +ISG+ ++ H  +A+  F +    G+    S LA+V+   +  + 
Sbjct: 173 QQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAA 232

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL-- 434
           L  GL +H  AIK G+ S + + ++L+++Y K      AR + D  S K    +NA+L  
Sbjct: 233 LNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGV 292

Query: 435 ---SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
              +GF+        +VM LF      G+ PD  T++ +LS  A    L  GR LH+  I
Sbjct: 293 YSQNGFL-------SNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAII 345

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K  + +++ V NALI MYAK G++  A + F+ ++ RD +SWNA++  Y    +  GA  
Sbjct: 346 KKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFS 405

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF  M  +G  PD++S+  +L AC    + E G   F+ +    GL   L   + ++D+ 
Sbjct: 406 LFRRMILDGIVPDEVSLASILSACGNIKVLEAGQ-QFHCLSVKLGLETNLFAGSSLIDMY 464

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA-----NSKFSI--LASKRLLDLEP 664
            + G + +A    +S P        R++VSV+ L+A     N+K SI  L   ++L L+P
Sbjct: 465 SKCGDIKDAHKTYSSMPE-------RSVVSVNALIAGYALKNTKESINLLHEMQILGLKP 517

Query: 665 KD 666
            +
Sbjct: 518 SE 519


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 224/671 (33%), Positives = 366/671 (54%), Gaps = 8/671 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL--DVAQKLFDGM--LVRSAITWTSLIK 132
           G+A+HA+ LKSGS +    +N+LI  Y+ F RL    A  +F  +    R   +W SL+ 
Sbjct: 31  GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-SGFE 191
                    ++      +  S    + H+ +    A +       G  +HA A K     
Sbjct: 91  PLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSAS 150

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +NVFV T+L++MY   G   +A+ VF  + +++      M+  Y     S+ AF +F  +
Sbjct: 151 SNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQM 210

Query: 252 LSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L       N++  T V+S     LG+  G Q+HGL VK G+V  +SV N++VTMY K G 
Sbjct: 211 LGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGC 270

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            + A  +F++  ERN I+W+A+I+GY ++G+   A+  F +    G       L  V++ 
Sbjct: 271 MDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNA 330

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           CS    L  G Q HG  +K G+   V + +ALVD+YAK G +  A+   + FS      +
Sbjct: 331 CSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLW 390

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
            A+++G ++    + E  ++L+++    G+ P+ +T + LL   A  A L  G+ LH   
Sbjct: 391 TAMVTGHVQN--GEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQI 448

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +K G+     VG+AL TMY+KCG+++    +F+ +  RD+++WN+++S ++ +G G  A+
Sbjct: 449 LKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAI 508

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            LFEEMK EG APD ++ + VL AC + GL + G   F  + + YGL P L+H+ACMVD+
Sbjct: 509 NLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDI 568

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           L RAG LSEA + I S        LWR ++   + + +      A ++L+DL   D+ ++
Sbjct: 569 LSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAY 628

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           IL+SN+YA Q   ++  +VR  M  + +SK+ GCSW+E++S++H FV   + HP++E I 
Sbjct: 629 ILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIIN 688

Query: 731 SKLDLLNDEMK 741
           ++L  L   MK
Sbjct: 689 TELRRLGKHMK 699



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 186/381 (48%), Gaps = 2/381 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L  IS+  G L +G  VH  ++K G        N+L+ +YAK   +D A  +F+    R+
Sbjct: 227 LSAISVPLG-LPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERN 285

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +ITW+++I GY  +G+ ES + +   M+ +     E T   +L ACS +   + G+Q H 
Sbjct: 286 SITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHG 345

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K GFE  V+V ++L+ MY   GC  +A+  F   +  D+     M+  + + GE E 
Sbjct: 346 LMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQ 405

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  ++  +      PN  T T+++  C     +E GKQLH   +KFG     SVG+A+ T
Sbjct: 406 ALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALST 465

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  E+   +F  +  R++I+W ++ISG+ ++G G  AIN F E    G   D   
Sbjct: 466 MYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVT 525

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
              V+  CS    ++ G       IK +G    +     +VDI ++ G L  A+  ++  
Sbjct: 526 FINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESI 585

Query: 423 SCKYTAEFNAILSGFMEKIAD 443
           +  +      I+ G    + D
Sbjct: 586 TIDHGTCLWRIVLGACRSLRD 606



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 178/382 (46%), Gaps = 32/382 (8%)

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG--MSEEAERMFDAI--SERNLISWTAL 332
            +G+ LH  A+K G      V N+++T Y          A  +F  I  + R++ SW +L
Sbjct: 29  RDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSL 88

Query: 333 ISGYVRSGHGG-KAINGFLEFLDLGICCDSS-CLATVIDGCSVCSNLELGLQLHGFAIK- 389
           ++    S H    A++ F   L       S    A      +   +   G  +H  A K 
Sbjct: 89  LNPL--SHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKL 146

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
               S+V + TAL+++Y K G +  A+++ D    +    + A+++G+  +    E    
Sbjct: 147 PSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQE--AF 204

Query: 450 VLFSQQRLAGMEP---DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
            LF Q  + G  P   +    + +LS  +    L  G  +H   +K G    V V N+L+
Sbjct: 205 ELFRQ--MLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLV 262

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
           TMYAK G +D AF +F+   +R+ ++W+AM++ Y+ +G  + A+ +F +M   GF P + 
Sbjct: 263 TMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEF 322

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH------FACMVDLLGRAGRLSEA 620
           +++GVL AC     S+ G  +  E +Q +GL   L         + +VD+  + G + +A
Sbjct: 323 TLVGVLNAC-----SDVGTLM--EGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDA 375

Query: 621 MNLINSSPFSE-SPLLWRTLVS 641
               N   FSE   +LW  +V+
Sbjct: 376 KECFNQ--FSELDIVLWTAMVT 395


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 223/717 (31%), Positives = 391/717 (54%), Gaps = 26/717 (3%)

Query: 50  SCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN 107
           SCSE+    N++    +V+     G+L     +H F++K G   D +   +LI+ YAK  
Sbjct: 147 SCSEKP---NEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRG 203

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE 167
            +D A+ +FDG+ V++ +TWT++I GY   G  E  L +   M   +   + +  S +L 
Sbjct: 204 YVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLS 263

Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
           ACS+LE    G+QIH + ++ GF+ +V V   +I  Y      +    +F  L  KDV  
Sbjct: 264 ACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVS 323

Query: 228 VNFMILEYNKAGESEMAFH-----VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
              MI     AG  + +FH     +FV ++   ++P+ +  T+V++ C     +++G+Q+
Sbjct: 324 WTTMI-----AGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQV 378

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H  A+K  +  +  V N ++ MY K      A ++FD ++  N++S+ A+I GY R    
Sbjct: 379 HAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKL 438

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL---QLHGFAIKHGYLSDVRLG 399
            +A++ F E   + +      L T +    + S+L L     Q+H   IK G   D   G
Sbjct: 439 VEALDLFRE---MRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAG 495

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           +AL+D+Y+K   +  AR++ +    +    +NA+ SG+ +++ ++E   + L+   +++ 
Sbjct: 496 SALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEES--LKLYKDLQMSR 553

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           ++P+  TF+ +++ +++ A L  G+  H   IK G   D  V N+L+ MYAKCGSI+ + 
Sbjct: 554 LKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESH 613

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           + F   + RDI  WN+M+S YA HG    AL +FE M  EG  P+ ++ +G+L AC ++G
Sbjct: 614 KAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAG 673

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           L + G   F  + + +G+ P ++H+ACMV LLGRAG++ EA   +   P   + ++WR+L
Sbjct: 674 LLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSL 732

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           +S  ++  + +    A++  +  +P D+GS+IL+SN++A +GM      VR  M+  R+ 
Sbjct: 733 LSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVV 792

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK--LKVKDSSAFELQD 754
           KE G SWIE+++++H F+A    H +S  I   LD L  ++K    V +++ F L D
Sbjct: 793 KEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGYVPNAATFFLDD 849



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 173/569 (30%), Positives = 294/569 (51%), Gaps = 10/569 (1%)

Query: 78  QAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           + +HA ++  G  Q+D F  N L++ Y+K N    AQKLFD M  R+ +TW+S++  Y  
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 137 DGDYESVLGIACDMYRS-EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            G     L + C   RS  EK NE+  + ++ AC+ L +     Q+H F +K GF  +V+
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           VGTSLI  Y   G   EA  +F GL  K       +I  Y K G SE++  +F  +   D
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGD 250

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P+ Y  ++V+S C     +E GKQ+HG  ++ G   ++SV N I+  Y K    +   
Sbjct: 251 VYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGR 310

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++F+ + +++++SWT +I+G +++   G A++ F+E +  G   D+    +V++ C    
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ 370

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L+ G Q+H +AIK    +D  +   L+D+YAK   L +AR + D  +      +NA++ 
Sbjct: 371 ALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIE 430

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+  +  D   + + LF + RL+   P  +TF  LL LS+S   L     +H   IK G 
Sbjct: 431 GYSRQ--DKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGV 488

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
           + D   G+ALI +Y+KC  +  A  +F+ I DRDIV WNAM S Y+     + +L L+++
Sbjct: 489 SLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKD 548

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL--RPILEHFACMVDLLGR 613
           ++     P++ +   V+ A         G    N++ ++ GL   P + +   +VD+  +
Sbjct: 549 LQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKM-GLDDDPFVTN--SLVDMYAK 605

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            G + E+    +S+        W +++S 
Sbjct: 606 CGSIEESHKAFSSTN-QRDIACWNSMIST 633


>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 736

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 232/681 (34%), Positives = 370/681 (54%), Gaps = 20/681 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGM--LVRSAITWTSL 130
           + G+A+H + LKSG+ +    +N+LI  Y    R  L  A  +F  +   +R   +W SL
Sbjct: 31  RTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSL 90

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFGEQIHAFAIK- 187
           +   L      S L     M  S E    + H+ +    A + +     G   HA A K 
Sbjct: 91  LNP-LSRHHPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKL 149

Query: 188 --SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
             S   NNVFV T+L++MY   G   +A+ VF G+ +++      M+  Y     SE AF
Sbjct: 150 PSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAF 209

Query: 246 HVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            +F  +L     E N++  T V+S     LG+  G QLHGL +K G+V  +SV N++VTM
Sbjct: 210 ELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTM 269

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K    + A R+F +  ERN I+W+A+I+GY ++G    A   FL+    G        
Sbjct: 270 YAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTF 329

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
             V++ CS    L +G Q H   +K G+ + V + +ALVD+YAK G +  A+   DGF  
Sbjct: 330 VGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAK---DGFHQ 386

Query: 425 KYTAE----FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            Y  +    + A+++G ++    + E+ ++L+S+    G+ P  +T + +L   A  A L
Sbjct: 387 LYDVDDVVLWTAMITGHVQN--GEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAAL 444

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ LHA  +K  ++    VG AL TMY+KCG+++ +  +F+ + DRD++SWN+++S +
Sbjct: 445 DLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVF 504

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           + HG G  AL +FEEMK EG APD I+ + +L AC + GL + G   F  + + Y L P 
Sbjct: 505 SQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPT 564

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           L+H+ACMVD+L RAG+L EA + I+S        LWR ++   + + +      A ++L+
Sbjct: 565 LDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLM 624

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L  +D+ ++IL+SN+YA Q   ++  +VR  M    +SK+ GCSW+E+ +++H FV   
Sbjct: 625 ELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVGE 684

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
           + HPE+E I  +L  L   MK
Sbjct: 685 QQHPEAENINVELIRLAKHMK 705



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 181/387 (46%), Gaps = 13/387 (3%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L  +S+  G L +G  +H  +LK G        N+L+ +YAK   +D A ++F     R+
Sbjct: 232 LSAVSVPLG-LLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERN 290

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +ITW+++I GY  +G+      +   M+ S     E T   +L ACS +   + G+Q H 
Sbjct: 291 SITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHC 350

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESE 242
             +K GFE  V+V ++L+ MY   GC  +A++ F  L    DV     MI  + + GE E
Sbjct: 351 LMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHE 410

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  ++  +      P+  T T+V+  C     ++ GKQLH   +K       SVG A+ 
Sbjct: 411 EALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALS 470

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
           TMY K G  E++  +F  + +R++ISW ++IS + + G G  A++ F E    G   D  
Sbjct: 471 TMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHI 530

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL------VDIYAKGGDLKSAR 416
               ++  CS      +GL   G+        D  L   L      VDI ++ G LK A+
Sbjct: 531 TFINLLSACS-----HMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAK 585

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIAD 443
             +D  +  +      I+ G    + D
Sbjct: 586 DFIDSITIDHGTCLWRIVLGACRSLRD 612


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 215/652 (32%), Positives = 341/652 (52%), Gaps = 9/652 (1%)

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           L +A+ LFD +       + +LI+ Y   G   ++        R   + N +T   +L+A
Sbjct: 79  LSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKA 138

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           CS L D      +H  A ++G   ++FV T+L+ +Y     FR A  VFR +  +DV   
Sbjct: 139 CSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAW 198

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N M+  Y   G+        + L+  D  PN  T   ++ +  ++  + +G+ +H  +V+
Sbjct: 199 NAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVR 257

Query: 289 FGVVRE----ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
              + +    + VG A++ MY K G    A R+F+A++ RN ++W+AL+ G+V  G   +
Sbjct: 258 ACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLE 317

Query: 345 AINGFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
           A + F + L  G+C    + +A+ +  C+  S+L LG QLH    K G  +D+  G +L+
Sbjct: 318 AFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLL 377

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
            +YAK G +  A  L D    K T  ++A++SG+++    DE     +F + +   ++PD
Sbjct: 378 SMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADE--AFRVFRKMQACNVQPD 435

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
             T   L+   +  A L  G+  H   I  G A++  + NALI MYAKCG ID + QIF 
Sbjct: 436 VATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFD 495

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            +  RDIVSWN M++ Y +HGLGK A  LF +MK +   PDD++ + ++ AC +SGL   
Sbjct: 496 VMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTE 555

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
           G   F+ +   YG+ P +EH+  MVDLL R G L EA   I   P      +W  L+   
Sbjct: 556 GKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGAC 615

Query: 644 KLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAG 703
           ++  N       S  +  L P+  G+F+L+SN+++  G  DEAA+VR    +    K  G
Sbjct: 616 RVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPG 675

Query: 704 CSWIEIDSKLHHFVASGKDHPESEEIYSKLD-LLNDEMKLKVKDSSAFELQD 754
           CSWIEI+  LH F+   + H +S EIY +LD +L D  KL  +  ++F LQD
Sbjct: 676 CSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQD 727



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 245/513 (47%), Gaps = 19/513 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      DL+  +AVH    ++G   D F +  L+++YAK      A  +F  M 
Sbjct: 132 FPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP 191

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIAC-DMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            R  + W +++ GY   G Y     IAC  + + +   N  T   +L   +       G 
Sbjct: 192 ARDVVAWNAMLAGYALHGKYSDT--IACLLLMQDDHAPNASTLVALLPLLAQHGALSQGR 249

Query: 180 QIHAFAIKS----GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
            +HA+++++      ++ V VGT+L+ MY   G    A  VF  +A ++    + ++  +
Sbjct: 250 AVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGF 309

Query: 236 NKAGESEMAFHVFVHLLSSD---FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
              G    AF +F  +L+       P   +  + +  C     +  GKQLH L  K G+ 
Sbjct: 310 VLCGRMLEAFSLFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAKSGLH 367

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            +++ GN++++MY K G+ ++A  +FD +  ++ +S++AL+SGYV++G   +A   F + 
Sbjct: 368 TDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM 427

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
               +  D + + ++I  CS  + L+ G   HG  I  G  S+  +  AL+D+YAK G +
Sbjct: 428 QACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRI 487

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             +R + D    +    +N +++G+   I    ++   LF   +    EPD VTF  L+S
Sbjct: 488 DLSRQIFDVMPARDIVSWNTMIAGY--GIHGLGKEATALFLDMKHQACEPDDVTFICLIS 545

Query: 473 LSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DI 530
             +    +  G R  H  + K G    +     ++ + A+ G +D A+Q  +G+  + D+
Sbjct: 546 ACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADV 605

Query: 531 VSWNAMLSAYALH---GLGKGALLLFEEMKREG 560
             W A+L A  +H    LGK    + +++  EG
Sbjct: 606 RVWGALLGACRVHKNIDLGKQVSSMIQQLGPEG 638



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 4/175 (2%)

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           GDL  AR L D        ++NA++  +   +      + +  S +R    +P+  TF  
Sbjct: 77  GDLSLARHLFDQIPAPGIHDYNALIRAY--SLRGPALALRLYRSLRRRRLPQPNNYTFPF 134

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +L   ++   L   R++H ++ + G  AD+ V  AL+ +YAKC S   A  +F+ +  RD
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG-LSEG 583
           +V+WNAML+ YALHG     +     M+ +  AP+  +++ +L      G LS+G
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQ-DDHAPNASTLVALLPLLAQHGALSQG 248


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 212/667 (31%), Positives = 358/667 (53%), Gaps = 7/667 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +H+  LK G  +D+F    L  LYA++  L  A KLF+    ++   W +L++ Y  +G 
Sbjct: 23  LHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGK 82

Query: 140 YESVLGIACDMYR---SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +   L +   M     +EE+ + +T S+ L++CS L+    G+ IH F  K   +N++FV
Sbjct: 83  WVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFV 142

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SD 255
           G++LI +Y   G   +A  VF     +DV     +I  Y + G  E+A   F  ++    
Sbjct: 143 GSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQ 202

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P+  T  +  S C +      G+ +HG   + G   ++ + N+I+ +YGK G    A 
Sbjct: 203 VSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAA 262

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F  +  +++ISW+++++ Y  +G    A+N F E +D  I  +   + + +  C+  S
Sbjct: 263 NLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSS 322

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           NLE G  +H  A+ +G+  D+ + TAL+D+Y K    K+A  L +    K    +  + S
Sbjct: 323 NLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFS 382

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+ E I    + + V F      G  PD +   ++L+ S+    + +   LHA+  K+G+
Sbjct: 383 GYAE-IGMAHKSLGV-FCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGF 440

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +  +G +LI +YAKC SID A ++FKG+  +D+V+W+++++AY  HG G+ AL LF +
Sbjct: 441 DNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQ 500

Query: 556 MKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           M       P+D++ + +L AC ++GL E GI +F+ +   Y L P  EH+  MVDLLGR 
Sbjct: 501 MSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRM 560

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G L +A+++IN  P    P +W  L+   ++  N K   LA+  L  L+P  AG + L+S
Sbjct: 561 GELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLS 620

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           N+Y       +AAK+RT + + R  K  G S +EI +++H F+AS + H ES++IY  L 
Sbjct: 621 NIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYGMLR 680

Query: 735 LLNDEMK 741
            L+  MK
Sbjct: 681 KLDARMK 687



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 224/477 (46%), Gaps = 4/477 (0%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G   L+LG+ +H FL K    ND F  + LI LY+K  +++ A K+F     +  + WTS
Sbjct: 117 GLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTS 176

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV-ILEACSLLEDRIFGEQIHAFAIKS 188
           +I GY  +G  E  L     M   E+   +    V    AC+ L D   G  +H F  + 
Sbjct: 177 IITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRR 236

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF+  + +  S++++Y  +G  R A N+FR + YKD+   + M+  Y   G    A ++F
Sbjct: 237 GFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLF 296

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             ++    E N  T  + +  C  +  +EEGK +H LAV +G   +I+V  A++ MY K 
Sbjct: 297 NEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKC 356

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              + A  +F+ + +++++SW  L SGY   G   K++  F   L  G   D+  L  ++
Sbjct: 357 FSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKIL 416

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
              S    ++  L LH F  K G+ ++  +G +L+++YAK   + +A  +  G   K   
Sbjct: 417 AASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVV 476

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLH 487
            +++I++ +       EE + + +     + ++P+ VTF  +LS  +    +  G +  H
Sbjct: 477 TWSSIIAAYGFH-GQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFH 535

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
               +     +      ++ +  + G +D A  +   +        W A+L A  +H
Sbjct: 536 VMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIH 592



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 23/288 (7%)

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L  +++ C  CS + +  QLH   +K G   D  + T L  +YA+   L  A  L +   
Sbjct: 7   LVKLLETC--CSKISIP-QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETP 63

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM---EPDPVTFSRLLSLSASQACL 480
           CK    +NA+L  +   +     + + LF Q     +    PD  T S  L   +    L
Sbjct: 64  CKTVYLWNALLRSYF--LEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKL 121

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H +  K     D+ VG+ALI +Y+KCG ++ A ++F     +D+V W ++++ Y
Sbjct: 122 ELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGY 181

Query: 541 ALHGLGKGALLLFEEM-KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL-- 597
             +G  + AL  F  M   E  +PD ++++    AC  + LS+     FN    ++G   
Sbjct: 182 EQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASAC--AQLSD-----FNLGRSVHGFVK 234

Query: 598 RPILEHFACM----VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           R   +   C+    ++L G+ G +  A NL    P+ +  + W ++V+
Sbjct: 235 RRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKD-IISWSSMVA 281


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 219/676 (32%), Positives = 367/676 (54%), Gaps = 9/676 (1%)

Query: 74   LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            L  G  VHA  +K G  ++ +  ++LIN+YAK  +++ A+K+FD +  R+ + W +++ G
Sbjct: 365  LNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGG 424

Query: 134  YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            Y  +G    V+ +  +M       +E T + IL AC+ LE    G Q+H+F IK  FE N
Sbjct: 425  YAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYN 484

Query: 194  VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            +FV  +L+ MY   G   EA   F  +  +D    N +I+ Y +  + + AF++F  ++ 
Sbjct: 485  LFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMIL 544

Query: 254  SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
                P++ +  +++S C     +E+G+Q+H   VK G+   +  G++++ MY K G  E 
Sbjct: 545  DGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEA 604

Query: 314  AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
            A  +F  +  R+++S  A+I+GY ++    +AI+ F E  + G+       A+++D C+ 
Sbjct: 605  ARYVFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTG 663

Query: 374  CSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFN 431
               L LG Q+H    K G L D   LG +L+ +Y        A +L   F   K T  + 
Sbjct: 664  PYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWT 723

Query: 432  AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            AI+SG  +      E+ + L+ +       PD  TF+ +L   +  A L  GR +H+   
Sbjct: 724  AIISGHTQNGC--SEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIF 781

Query: 492  KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHGLGKGAL 550
              G  +D + G+A++ MYAKCG +  + Q+F+ + S  D++SWN+M+  +A +G  + AL
Sbjct: 782  HVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENAL 841

Query: 551  LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
             +F+EMK     PDD++ LGVL AC ++G    G  +F+ +   Y + P L+H ACM+DL
Sbjct: 842  KIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDL 901

Query: 611  LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
            LGR G L EA   I+   F  + ++W TL+   ++  +      A+++L++LEP+++  +
Sbjct: 902  LGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPY 961

Query: 671  ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
            +L+SN+YA  G  DE   VR  M +  L K  GCSWI +  K + FVA  K HP + EI+
Sbjct: 962  VLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIH 1021

Query: 731  SKLDLLNDEMKLKVKD 746
            +   LL D + L  +D
Sbjct: 1022 A---LLKDLIALMKED 1034



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 168/596 (28%), Positives = 279/596 (46%), Gaps = 62/596 (10%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F++ PQ  +++  S   +  + +HA  LK G  +     + +++LYAK   ++ A K F+
Sbjct: 86  FDETPQ--RLAQAS---RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFN 140

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            +  R  + W S++  Y   G  E V+     +       N+ T +++L +C+ L D   
Sbjct: 141 QLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDL 200

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+H   IK GFE N F   SLI MY   G   +A  +F  +   D      MI  Y +
Sbjct: 201 GKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQ 260

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  VF  +      P+   F  VI+ C             GL            
Sbjct: 261 VGLPEEALKVFEDMQKLGLVPDQVAFVTVITACV------------GL------------ 296

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
                      G  ++A  +F  +   N+++W  +ISG+V+ G   +AI+ F      G+
Sbjct: 297 -----------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGV 345

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
               S L +V+   +    L  GL +H  AIK G  S+V +G++L+++YAK   +++A+ 
Sbjct: 346 KSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKK 405

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    +    +NA+L G+ +        VM LFS+ R  G  PD  T++ +LS  A  
Sbjct: 406 VFDALDERNLVLWNAMLGGYAQN--GYASKVMKLFSEMRGCGFWPDEFTYTSILSACACL 463

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
            CL  GR LH++ IK  +  ++ V N L+ MYAKCG+++ A Q F+ I +RD VSWNA++
Sbjct: 464 ECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAII 523

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY-- 595
             Y        A  +F  M  +G APD++S+  +L  C      E G       EQ++  
Sbjct: 524 VGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQG-------EQVHCF 576

Query: 596 ----GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
               GL+  L   + ++D+  + G +  A  + +  P        R++VS++ ++A
Sbjct: 577 LVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPS-------RSVVSMNAIIA 625



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 262/503 (52%), Gaps = 38/503 (7%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D+ LG+ VH  ++K G + ++F   +LI++Y+K   L  A+K+FD ++    ++WT++I 
Sbjct: 197 DIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIA 256

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY+  G  E  L +  DM                +   L+ D++      AF        
Sbjct: 257 GYVQVGLPEEALKVFEDM----------------QKLGLVPDQV------AF-------- 286

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            V V T+ + +    G   +A ++F  +   +V   N MI  + K G    A   F ++ 
Sbjct: 287 -VTVITACVGL----GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMW 341

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +  +    T  +V+S       +  G  +H  A+K G+   + VG++++ MY K    E
Sbjct: 342 KTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKME 401

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A+++FDA+ ERNL+ W A++ GY ++G+  K +  F E    G   D     +++  C+
Sbjct: 402 AAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACA 461

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               LE+G QLH F IKH +  ++ +   LVD+YAK G L+ AR   +    +    +NA
Sbjct: 462 CLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNA 521

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I+ G++++  +DE++   +F +  L G+ PD V+ + +LS  A+   L +G  +H + +K
Sbjct: 522 IIVGYVQE--EDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVK 579

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +G    +  G++LI MY KCG+I+ A  +F  +  R +VS NA+++ YA + L + A+ L
Sbjct: 580 SGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVE-AIDL 638

Query: 553 FEEMKREGFAPDDISILGVLQAC 575
           F+EM+ EG  P +I+   +L AC
Sbjct: 639 FQEMQNEGLNPSEITFASLLDAC 661



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 241/480 (50%), Gaps = 8/480 (1%)

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE 167
           RLD A  LF  M   + + W  +I G++  G     +    +M+++  K    T   +L 
Sbjct: 298 RLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLS 357

Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
           A + LE   +G  +HA AIK G  +NV+VG+SLI+MY        A+ VF  L  +++  
Sbjct: 358 AIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVL 417

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
            N M+  Y + G +     +F  +    F P+++T+T+++S C     +E G+QLH   +
Sbjct: 418 WNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFII 477

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           K      + V N +V MY K G  EEA + F+ I  R+ +SW A+I GYV+     +A N
Sbjct: 478 KHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFN 537

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
            F   +  GI  D   LA+++ GC+    LE G Q+H F +K G  + +  G++L+D+Y 
Sbjct: 538 MFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYV 597

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           K G +++AR +      +     NAI++G+ +   +D  + + LF + +  G+ P  +TF
Sbjct: 598 KCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ---NDLVEAIDLFQEMQNEGLNPSEITF 654

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTG--YAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           + LL        L  GR +H    K G  Y  D + G +L+ MY        A  +F   
Sbjct: 655 ASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFL-GVSLLVMYMNSQRKTDADILFSEF 713

Query: 526 S-DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEG 583
              +  + W A++S +  +G  + AL L++EM R    PD  +   VL+AC I + L +G
Sbjct: 714 QYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDG 773



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 222/483 (45%), Gaps = 54/483 (11%)

Query: 153 SEEKFNEHTCSVILEACSLLEDR-IFGEQ-------------IHAFAIKSGFENNVFVGT 198
           SE K   H   + L+ C  ++ R  F E              IHA  +K GF +   +G+
Sbjct: 61  SEHKIFTHLLKICLQQCQRIKIRHPFDETPQRLAQASRTSKTIHAQTLKFGFGSKGRLGS 120

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +++ +Y   G    A   F  L  +D+   N ++  Y++ G  E     F  L +    P
Sbjct: 121 AIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSP 180

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           N +T+  V+S C   + ++ GKQ+H   +K G         +++ MY K G   +A ++F
Sbjct: 181 NQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIF 240

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           DA+ + + +SWTA+I+GYV+ G   +A+  F +   LG+  D     TVI  C       
Sbjct: 241 DAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITAC------- 293

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
           +GL         G L D        D++ +  +                  +N ++SG +
Sbjct: 294 VGL---------GRLDDA------CDLFVQMPNTN-------------VVAWNVMISGHV 325

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
           ++  D E   +  F      G++    T   +LS  AS   L  G  +HA +IK G  ++
Sbjct: 326 KRGCDIE--AIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSN 383

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           V VG++LI MYAKC  ++ A ++F  + +R++V WNAML  YA +G     + LF EM+ 
Sbjct: 384 VYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRG 443

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFN-EIEQIYGLRPILEHFACMVDLLGRAGRL 617
            GF PD+ +   +L AC      E G  L +  I+  +     +E+   +VD+  + G L
Sbjct: 444 CGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVEN--TLVDMYAKCGAL 501

Query: 618 SEA 620
            EA
Sbjct: 502 EEA 504



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H   +K G+ S  RLG+A+VD+YAK G+++ A    +    +    +N++LS +  +  
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ-- 160

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
              E V+  F   +  G+ P+  T++ +LS  A    +  G+ +H   IK G+  +    
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
            +LI MY+KCGS+  A +IF  + D D VSW AM++ Y   GL + AL +FE+M++ G  
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280

Query: 563 PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS--EA 620
           PD ++ + V+ AC+  G  +    LF ++       P     A  V + G   R    EA
Sbjct: 281 PDQVAFVTVITACVGLGRLDDACDLFVQM-------PNTNVVAWNVMISGHVKRGCDIEA 333

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD---LEPKDAGSFILVSNMY 677
           ++   +        +W+T V  ++    S  S +AS   L+   L    A    L SN+Y
Sbjct: 334 IDFFKN--------MWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVY 385

Query: 678 AGQGMLDEAAK 688
            G  +++  AK
Sbjct: 386 VGSSLINMYAK 396



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 13/242 (5%)

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
           QR+    P   T  RL   S +       +++HA ++K G+ +   +G+A++ +YAKCG+
Sbjct: 78  QRIKIRHPFDETPQRLAQASRT------SKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGN 131

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           ++ A + F  +  RDI++WN++LS Y+  G  +  +  F  ++  G +P+  +   VL +
Sbjct: 132 VEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSS 191

Query: 575 CI-YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           C     +  G       I+  +      E    ++D+  + G L +A  + + +      
Sbjct: 192 CARLVDIDLGKQVHCGVIKMGFEFNSFCE--GSLIDMYSKCGSLVDARKIFD-AVVDPDT 248

Query: 634 LLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
           + W  +++  V   +      +    + L L P D  +F+ V     G G LD+A  +  
Sbjct: 249 VSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVP-DQVAFVTVITACVGLGRLDDACDLFV 307

Query: 692 TM 693
            M
Sbjct: 308 QM 309


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 224/703 (31%), Positives = 373/703 (53%), Gaps = 13/703 (1%)

Query: 49   VSCSERTLLFNDWPQLVKISI--------GSGDLKLGQAVHAFLLKSGSQNDTFEANNLI 100
            V C  R L+    P    +SI        G+   + G+ +H ++L++    D+F    LI
Sbjct: 652  VGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALI 711

Query: 101  NLYAKFNRLDVAQKLFDGMLVRS-AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
            ++Y KF     A ++F  +  +S  + W  +I G+      ES L +      +  K   
Sbjct: 712  DMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVS 771

Query: 160  HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
             + +  L ACS  E+  FG QIH   +K G +N+ +V TSL+SMY   G   EAE VF  
Sbjct: 772  TSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSC 831

Query: 220  LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
            +  K +   N M+  Y +      A  +F  +      P+ +T +NVIS C      + G
Sbjct: 832  VVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYG 891

Query: 280  KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
            K +H    K  +    ++ +A++T+Y K G   +A  +F ++ E+++++W +LISG  ++
Sbjct: 892  KSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKN 951

Query: 340  GHGGKAINGF--LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
            G   +A+  F  ++  D  +  DS  + +VI+ C+    L  GLQ+HG  IK G + +V 
Sbjct: 952  GKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVF 1011

Query: 398  LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
            +G++L+D+Y+K G  + A  +      +    +N+++S +     +  E  + LF+    
Sbjct: 1012 VGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRN--NLPELSIELFNLMLS 1069

Query: 458  AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
             G+ PD V+ + +L   +S A L++G+SLH Y+++ G  +D  + NALI MY KCG    
Sbjct: 1070 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 1129

Query: 518  AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
            A  IFK +  + +++WN M+  Y  HG  + AL LF+E+K+ G  PDD++ L ++ AC +
Sbjct: 1130 AENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNH 1189

Query: 578  SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
            SG  E G   F  ++Q YG+ P +EH+A MVDLLGRAGRL EA + I + P      +W 
Sbjct: 1190 SGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWL 1249

Query: 638  TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
             L+S S+   N +  IL++++LL +EP+   +++ + N+Y   G+ +EAAK+   M +  
Sbjct: 1250 CLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERG 1309

Query: 698  LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
            L K+ GCSWIE+    + F + G   P   EI+  L+ L   M
Sbjct: 1310 LQKQPGCSWIEVSDISNVFFSGGSSSPIKAEIFKVLNRLKSNM 1352



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 258/526 (49%), Gaps = 16/526 (3%)

Query: 61   WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD--- 117
            +P L+K      +L  G+ +H  ++  G + D F A +L+N+Y K   LD A ++FD   
Sbjct: 564  FPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 623

Query: 118  --GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
              G+  R      S+I GY     ++  +G    M     + +  + S+++    L ++ 
Sbjct: 624  QSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSV--LCKEG 681

Query: 176  IF----GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNF 230
             F    G+QIH + +++  + + F+ T+LI MYF  G   +A  VF  +  K +V   N 
Sbjct: 682  NFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNV 741

Query: 231  MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
            MI+ +  +   E +  +++   S+  +    +FT  +  C ++     G+Q+H   VK G
Sbjct: 742  MIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMG 801

Query: 291  VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
            +  +  V  ++++MY K GM  EAE +F  + ++ L  W A+++ YV + +G  A+  F 
Sbjct: 802  LDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFG 861

Query: 351  EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
                  +  DS  L+ VI  CS+    + G  +H    K    S   + +AL+ +Y+K G
Sbjct: 862  FMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCG 921

Query: 411  DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR--LAGMEPDPVTFS 468
                A ++      K    + +++SG  +      ++ + +F   +     ++PD    +
Sbjct: 922  CDTDAYLVFKSMEEKDMVAWGSLISGLCKN--GKFKEALKVFGDMKDDDDSLKPDSDIMT 979

Query: 469  RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
             +++  A    L  G  +H   IKTG   +V VG++LI +Y+KCG  + A ++F  +   
Sbjct: 980  SVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPE 1039

Query: 529  DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
            +IV+WN+M+S Y+ + L + ++ LF  M  +G  PD +SI  VL A
Sbjct: 1040 NIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVA 1085



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 201/436 (46%), Gaps = 21/436 (4%)

Query: 228 VNFMILEYNKAGESEMAFHVFV-HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
           VN  I    + GE   A H++  H  SS    + +TF +++  C     +  GK +HG  
Sbjct: 528 VNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSI 587

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFD-----AISERNLISWTALISGYVRSGH 341
           +  G   +  +  ++V MY K G  + A ++FD      +S R++    ++I GY +   
Sbjct: 588 IVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRR 647

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL--ELGLQLHGFAIKHGYLSDVRLG 399
             + +  F   L LG+  D+  L+ V+       N   E G Q+HG+ +++    D  L 
Sbjct: 648 FKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLK 707

Query: 400 TALVDIYAKGG-DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           TAL+D+Y K G    + R+ ++         +N ++ GF    ++  E  + L+   +  
Sbjct: 708 TALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGG--SEICESSLELYMLAKSN 765

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
            ++    +F+  L   +       GR +H   +K G   D  V  +L++MY+KCG +  A
Sbjct: 766 SVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEA 825

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             +F  + D+ +  WNAM++AY  +  G  AL LF  M+++   PD  ++  V+  C   
Sbjct: 826 ETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMF 885

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFA---CMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
           GL + G  +  E+ +    RPI    A    ++ L  + G  ++A  L+  S   +  + 
Sbjct: 886 GLYDYGKSVHAELFK----RPIQSTPAIESALLTLYSKCGCDTDAY-LVFKSMEEKDMVA 940

Query: 636 WRTLVSVSKLMANSKF 651
           W +L  +S L  N KF
Sbjct: 941 WGSL--ISGLCKNGKF 954


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 212/657 (32%), Positives = 357/657 (54%), Gaps = 7/657 (1%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
             +T   N +I+ + K   +  A+ LFD M  R+ +TWT L+  Y  +  ++    +   
Sbjct: 76  HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135

Query: 150 MYRSEE-KFNEH-TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS--LISMYF 205
           M RS      +H T + +L  C+    +    Q+HAFA+K GF+ N F+  S  L+  Y 
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195

Query: 206 HSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
                  A  +F  +  KD    N +I  Y K G    + H+F+ +  S  +P+D+TF+ 
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
           V+           G+QLH L+V  G  R+ SVGN I+  Y KH    E   +FD + E +
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
            +S+  +IS Y ++     +++ F E   +G    +   AT++   +  S+L++G QLH 
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
            A+     S + +G +LVD+YAK    + A ++      + T  + A++SG+++K     
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
              + LF++ R + +  D  TF+ +L  SAS A L+ G+ LHA+ I++G   +V  G+ L
Sbjct: 436 G--LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL 493

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           + MYAKCGSI  A Q+F+ + DR+ VSWNA++SA+A +G G+ A+  F +M   G  PD 
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553

Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
           +SILGVL AC + G  E G   F  +  IYG+ P  +H+ACM+DLLGR GR +EA  L++
Sbjct: 554 VSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613

Query: 626 SSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGSFILVSNMYAGQGMLD 684
             PF    ++W ++++  ++  N   +  A+++L  +E  +DA +++ +SN+YA  G  +
Sbjct: 614 EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWE 673

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +   V+  M +  + K    SW+E++ K+H F ++ + HP  +EI  K++ L  E++
Sbjct: 674 KVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 244/507 (48%), Gaps = 48/507 (9%)

Query: 76  LGQAVHAFLLKSGSQNDTF--EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           +GQ VHAF +K G   + F   +N L+  Y +  RLD+A  LF+ +  + ++T+ +LI G
Sbjct: 166 VGQ-VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  DG Y   + +   M +S  + ++ T S +L+A   L D   G+Q+HA ++ +GF  +
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             VG  ++  Y       E   +F  +   D    N +I  Y++A + E + H F  +  
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
             F+  ++ F  ++S+      ++ G+QLH  A+       + VGN++V MY K  M EE
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           AE +F ++ +R  +SWTALISGYV+ G  G  +  F +     +  D S  ATV+   + 
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            ++L LG QLH F I+ G L +V  G+ LVD+YAK G +K A  + +    +    +NA+
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +S   +    D E  +  F++   +G++PD V+                           
Sbjct: 525 ISAHADN--GDGEAAIGAFAKMIESGLQPDSVS--------------------------- 555

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-----WNAMLSAYALHGLGKG 548
                 I+G  ++T  + CG ++   + F+ +S    ++     +  ML     +G    
Sbjct: 556 ------ILG--VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607

Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC 575
           A  L +EM    F PD+I    VL AC
Sbjct: 608 AEKLMDEMP---FEPDEIMWSSVLNAC 631



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 164/358 (45%), Gaps = 1/358 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K  +G  D  LGQ +HA  + +G   D    N +++ Y+K +R+   + LFD M    
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++  +I  Y     YE+ L    +M            + +L   + L     G Q+H 
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            A+ +  ++ + VG SL+ MY     F EAE +F+ L  +       +I  Y + G    
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +F  +  S+   +  TF  V+        +  GKQLH   ++ G +  +  G+ +V 
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  ++A ++F+ + +RN +SW ALIS +  +G G  AI  F + ++ G+  DS  
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555

Query: 364 LATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +  V+  CS C  +E G +     +  +G     +    ++D+  + G    A  L+D
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 143/274 (52%), Gaps = 2/274 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ I+     L++G+ +H   L + + +     N+L+++YAK    + A+ +F  +  R+
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++WT+LI GY+  G + + L +   M  S  + ++ T + +L+A +     + G+Q+HA
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           F I+SG   NVF G+ L+ MY   G  ++A  VF  +  ++    N +I  +   G+ E 
Sbjct: 477 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEA 536

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIV 302
           A   F  ++ S  +P+  +   V++ C     VE+G +    ++  +G+  +      ++
Sbjct: 537 AIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACML 596

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
            + G++G   EAE++ D +  E + I W+++++ 
Sbjct: 597 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 206/674 (30%), Positives = 362/674 (53%), Gaps = 9/674 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            +L+ G+ +H+ ++K+G Q D    N+L+++Y K   L  A+++F G+  R  +++ +++
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA---CSLLEDRIFGEQIHAFAIKS 188
             Y      +  LG+   M       ++ T   +L+A    S+L++   G++IH   ++ 
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE---GKRIHKLTVEE 258

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  +++ VGT+L++M    G    A+  F+G+A +DV   N +I    + G +  AF  +
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQY 318

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             + S     N  T+ ++++ C  +  +E GK +H    + G   ++ +GNA+++MY + 
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC 378

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G   +A  +F  + +R+LISW A+I+GY R    G+A+  + +    G+         ++
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+  S    G  +H   ++ G  S+  L  AL+++Y + G L  A+ + +G   +   
Sbjct: 439 SACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVI 498

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N++++G  +      E    LF + +   +EPD +TF+ +LS   +   L  G+ +H 
Sbjct: 499 SWNSMIAGHAQH--GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
              ++G   DV +GNALI MY +CGS+  A  +F  +  RD++SW AM+   A  G    
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616

Query: 549 ALLLFEEMKREGFAPDDISIL-GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
           A+ LF +M+ EGF P D S    +L AC ++GL   G  +F+ +E  YG+ P +EH+ C+
Sbjct: 617 AIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCL 676

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           V LLGRA R  EA  LIN  PF     +W TL+   ++  N   +  A+   L L  ++ 
Sbjct: 677 VGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNP 736

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
             +IL+SN+YA  G  D+ AK+R  M    + KE G SWIE+D+ +H F+A+ + HPE+ 
Sbjct: 737 AVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETA 796

Query: 728 EIYSKLDLLNDEMK 741
           EIY++L  L+ EM+
Sbjct: 797 EIYAELKRLSVEME 810



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 178/615 (28%), Positives = 314/615 (51%), Gaps = 25/615 (4%)

Query: 14  FKSQQSLPPLKKKVPINTFSPNPKS--QVAYLCSISSVSCSERTLLFNDWPQLVKISIGS 71
            ++++   P ++ V  NT  P P    +  Y+  + +  C+ + LL    P+  +I    
Sbjct: 1   MRNERHCGPDREDVS-NTHQPRPTETDRATYVALLQN--CTRKRLL----PEAKRI---- 49

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
                    HA ++++G   D F +N LIN+Y K   +  A ++F  M  R  I+W SLI
Sbjct: 50  ---------HAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLI 100

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y   G  +    +  +M  +    N+ T   IL AC    +   G++IH+  IK+G++
Sbjct: 101 SCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQ 160

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +  V  SL+SMY   G    A  VF G++ +DV   N M+  Y +    +    +F  +
Sbjct: 161 RDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM 220

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            S    P+  T+ N++        ++EGK++H L V+ G+  +I VG A+VTM  + G  
Sbjct: 221 SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDV 280

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           + A++ F  I++R+++ + ALI+   + GH  +A   +      G+  + +   ++++ C
Sbjct: 281 DSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S    LE G  +H    + G+ SDV++G AL+ +YA+ GDL  AR L      +    +N
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           AI++G+  +  +D  + M L+ Q +  G++P  VTF  LLS  A+ +    G+ +H   +
Sbjct: 401 AIIAGYARR--EDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           ++G  ++  + NAL+ MY +CGS+  A  +F+G   RD++SWN+M++ +A HG  + A  
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYK 518

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF+EM+ E   PD+I+   VL  C      E G  +   I +  GL+  +     ++++ 
Sbjct: 519 LFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE-SGLQLDVNLGNALINMY 577

Query: 612 GRAGRLSEAMNLINS 626
            R G L +A N+ +S
Sbjct: 578 IRCGSLQDARNVFHS 592



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 256/485 (52%), Gaps = 12/485 (2%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   +L+ C+        ++IHA  +++G   ++F+   LI+MY       +A  VF+ +
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             +DV   N +I  Y + G  + AF +F  + ++ F PN  T+ ++++ CY    +E GK
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++H   +K G  R+  V N++++MYGK G    A ++F  IS R+++S+  ++  Y +  
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
           +  + +  F +    GI  D      ++D  +  S L+ G ++H   ++ G  SD+R+GT
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           ALV +  + GD+ SA+    G + +    +NA+++   +   + E      + + R  G+
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVE--AFEQYYRMRSDGV 326

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
             +  T+  +L+  ++   L  G+ +H++  + G+++DV +GNALI+MYA+CG +  A +
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F  +  RD++SWNA+++ YA       A+ L+++M+ EG  P  ++ L +L AC  S  
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446

Query: 581 SEGGICLFNEIEQIYGLRPILE---HFA-CMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
              G  +  +I     LR  ++   H A  ++++  R G L EA N+   +  +   + W
Sbjct: 447 YADGKMIHEDI-----LRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ-ARDVISW 500

Query: 637 RTLVS 641
            ++++
Sbjct: 501 NSMIA 505



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 194/385 (50%), Gaps = 4/385 (1%)

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E +  T+  ++  C     + E K++H   V+ GV  +I + N ++ MY K     +A +
Sbjct: 24  ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  +  R++ISW +LIS Y + G   KA   F E  + G   +     +++  C   + 
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           LE G ++H   IK GY  D R+  +L+ +Y K GDL  AR +  G S +    +N +L  
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           + +K    E   + LF Q    G+ PD VT+  LL    + + L  G+ +H  +++ G  
Sbjct: 204 YAQKAYVKE--CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           +D+ VG AL+TM  +CG +D A Q FKGI+DRD+V +NA+++A A HG    A   +  M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           + +G A +  + L +L AC  S   E G  + + I +  G    ++    ++ +  R G 
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGD 380

Query: 617 LSEAMNLINSSPFSESPLLWRTLVS 641
           L +A  L  + P     + W  +++
Sbjct: 381 LPKARELFYTMP-KRDLISWNAIIA 404


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 220/689 (31%), Positives = 370/689 (53%), Gaps = 15/689 (2%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSG--SQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +L++ S     LK  +++H F++K     ++ T   N L+  Y+K +    A+++FD + 
Sbjct: 66  ELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIP 125

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +S  +WT L+ G  ++G Y   +    ++   +   +E+  S  ++AC  ++  + GE 
Sbjct: 126 QKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEM 185

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +HA  I  GF +  FV TSL+ MY   G   ++  VF  L  ++    N MI  +   G 
Sbjct: 186 VHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGL 245

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A++ F+ +L  +  PN   F +V     +   VE+G+ ++ +A + G+   I VG A
Sbjct: 246 YAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTA 305

Query: 301 IVTMYGKHGMSEEAERMFDAISERNL------ISWTALISGYVRSGHGGKAINGFLEFLD 354
           ++ M+ K G   E+  +F +    N       + W A+ISG+  SGHG +A+  FL    
Sbjct: 306 LIDMFAKCGCVTESWSVFVS----NFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQ 361

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             I  D     + ++  +   +LE   QLHG   K G +  V L  AL+D YAK G+L +
Sbjct: 362 NNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIG-VSLCNALMDAYAKCGELDA 420

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            R L D +       +  +++ + +  + + ED + +FSQ R  G +P+ VTFS +L+  
Sbjct: 421 MRKLFDTWEESNQISWTTLVTAYSQ--SSEWEDALSVFSQMREMGFQPNQVTFSGVLASC 478

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           AS   L  G+ +H+ + KTG+A D  V + LI MYAKCGS+  A ++F+ + D D++SW 
Sbjct: 479 ASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWT 538

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM+S YA HG+ K AL LF +M+     P+  + L +L AC + GL + G+  F+ +E+ 
Sbjct: 539 AMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEER 598

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           YGL P +EH+AC+VD+LGR GRL+EA   I   P      +W TL+   ++  N + + +
Sbjct: 599 YGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKI 658

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
           A++++L   P D  + +L+SN Y   G ++    VR  M    + KE G SWI I  K+H
Sbjct: 659 AAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKSQAMRKETGMSWICIGGKIH 718

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMKLK 743
            F +  + HP+ ++IY  L++L ++++ K
Sbjct: 719 KFCSGDQYHPQKDDIYKTLNVLMEKVQGK 747


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 228/685 (33%), Positives = 372/685 (54%), Gaps = 14/685 (2%)

Query: 68  SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
           S+ +  L L + +   + KSG  +D +  + L++ +AK   +  A+ +F  M  R+ ++ 
Sbjct: 294 SLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSL 353

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED-RIFGEQIHA 183
             LI G +     E  + +  +M  S E  N ++  +IL A     +LE+ +  G ++HA
Sbjct: 354 NGLIIGLVRQKRGEEAVELFMEMKDSVE-LNPNSYMIILTAFPEFHVLENGKRKGSEVHA 412

Query: 184 FAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           F I+SG  N  + +G  LI+MY   G   +A  VFR +  KD    N MI   ++  +  
Sbjct: 413 FLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFL 472

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A   F  +  ++  P+++T  + +S C     +  G+QLH   +K G+  ++SV NA++
Sbjct: 473 EAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALL 532

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG-KAINGFLEFLDLGICCDS 361
            +YG+ G  +E ++ F  + + + +SW +LI     S     +A+  FL  +  G   + 
Sbjct: 533 ALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNR 592

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
               T++   S  S  ELG Q+H   +K    +D  +  AL+  Y K GD+     +   
Sbjct: 593 VTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSR 652

Query: 422 FSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            S +     +N+++SG++      +   MV F  Q+  G   D  TF+ +LS  A+ A L
Sbjct: 653 MSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQK--GQRLDGFTFATVLSACATVATL 710

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            RG  +H  S++    +D+++G+AL+ MYAKCG ID A + F+ +  R++ SWN+M+S Y
Sbjct: 711 ERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGY 770

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           A HG G  +L LF +MK +G  PD ++ +GVL AC ++GL   G   F+ + +IYGL P 
Sbjct: 771 ARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPR 830

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL---ASK 657
           +EHF+CMVDLLGR G L++  + +N  P   + L+WRT++      AN + + L   A++
Sbjct: 831 MEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGAC-CRANGRNTALGRRAAE 889

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            LL++EP +A ++IL+SNMYA  G  D+ AK R  M    + KEAGCSW+ +   +H FV
Sbjct: 890 MLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFV 949

Query: 718 ASGKDHPESEEIYSKLDLLNDEMKL 742
           A  K HPE + IY KL  LN +M+L
Sbjct: 950 AGDKSHPEKDLIYEKLKELNGKMRL 974



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 169/610 (27%), Positives = 286/610 (46%), Gaps = 54/610 (8%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           Q  + S GS D    + +H  L K+G  ND F  N LIN+YA+   L   +K+FD M +R
Sbjct: 81  QRYRYSCGSKD---AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLR 137

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKF--NEHTCSVILEACSLLEDR--I 176
           + ++W+ LI GY  +     +   AC+++R    + F  N +    ++ AC    +    
Sbjct: 138 NLVSWSCLISGYTRN----RMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLK 193

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHS-GCFREAENVFRGLAYKDVRCVNFMILEY 235
           FG QIH    K+ + N+V     LISMY ++ G    A   F  +  +++  +N MI  Y
Sbjct: 194 FGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVY 253

Query: 236 NKAGESEMAFHVFV----HLLSSDFEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVKF 289
            + G++  AF +F      ++    +PN+YTF ++IS      N G+   +QL     K 
Sbjct: 254 CQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKS 313

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           G + ++ VG+A+V+ + K G    A+ +F  +S RN++S   LI G VR   G +A+  F
Sbjct: 314 GFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELF 373

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLE----LGLQLHGFAIKHGYL-SDVRLGTALVD 404
           +E  D  +  + +    ++        LE     G ++H F I+ G L + + +G  L++
Sbjct: 374 MEMKD-SVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLIN 432

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSG------FMEKIADDEEDVMVLFSQQRLA 458
           +YAK G +  A ++      K +  +N++++G      F+E +          F + R  
Sbjct: 433 MYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKT--------FQEMRRT 484

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
            + P   T    LS  AS   +  G  LH   +K G   DV V NAL+ +Y +CG +   
Sbjct: 485 ELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKEC 544

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGK-GALLLFEEMKREGFAPDDISILGVLQACIY 577
            + F  + D D VSWN+++ A A        A+  F  M R G+ P+ ++ + +L A   
Sbjct: 545 QKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSS 604

Query: 578 SGLSEGGICLFNEIEQIYGL---RPILEHFACMVDLL---GRAGRLSEAMNLINSSPFSE 631
             L E G       +QI+ L   R +    A    LL   G+ G +    N+ +     +
Sbjct: 605 LSLHELG-------KQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQ 657

Query: 632 SPLLWRTLVS 641
             + W +++S
Sbjct: 658 DEVSWNSMIS 667


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 213/651 (32%), Positives = 353/651 (54%), Gaps = 3/651 (0%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           DTF AN +I +Y K    + A+++FD +  R+A +W+ L++ Y+ +  Y+  L +  +M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
           R E   + +T S +L AC+ L D   G  +   A + GFE +V V TSLI ++   GC  
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 212 EAENVFRGL-AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           EAE+VFR + A +D+  V  MI  Y + G++++A   +  + S   EP+ +T+  ++  C
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
                + +GK +H   ++      ISV NA++TMY K G  ++++ +F  +  ++++SW 
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           A+I+ Y   GH   A + F     LG   D    ++++  C+    LE G  LH      
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G+  D  +   L+ ++ + G L+SAR        K    +N +L+ + +   D  +D + 
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQ--FDKGKDALF 358

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           L+    L G  PD  TFS ++   AS   L  G+ +H  S   G+  DVI+G AL+ MYA
Sbjct: 359 LYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYA 418

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCGS+  A + F GIS++D+VSW+AM++A A HG  + AL L   M  +G A ++++   
Sbjct: 419 KCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASS 478

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC + G    GI  F  + Q +G+    E+    +DLLGRAG L EA +++++ PF 
Sbjct: 479 VLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFK 538

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
            S +   TL+   K+  + +     +KR++ LEP++ GS++L++NMYA  G  D+ AK+R
Sbjct: 539 VSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLR 598

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             M    + ++ GCS IE   K++ F      +P + EI ++L+ L   MK
Sbjct: 599 RYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMK 649



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 169/351 (48%), Gaps = 15/351 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL- 135
           G+ +H  +L+S    +    N LI +YAK   L  ++ LF  M V+  ++W ++I  Y  
Sbjct: 189 GKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTL 248

Query: 136 --DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGF 190
              D D  S+    C +  + + +   T S IL AC+    LED   G  +H      GF
Sbjct: 249 YGHDKDAFSLFHRMCTLGHTPDIY---TFSSILGACASPKRLED---GRMLHVRITARGF 302

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + +  +  +LISM+   G    A   F  +  K++   N M+  Y +  + + A  ++ +
Sbjct: 303 DRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKN 362

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +L   F P+ +TF++V+  C     + EGK +H  +   G  +++ +G A+V MY K G 
Sbjct: 363 MLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGS 422

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVID 369
             +A++ FD IS ++++SW+A+I+   + GH  +A+      ++L GI  +    ++V+ 
Sbjct: 423 LADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALE-LSHLMNLQGIAQNEVTASSVLH 481

Query: 370 GCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
            CS    L  G+    G +   G   D       +D+  + G LK A  +L
Sbjct: 482 ACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVL 532



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 126/263 (47%), Gaps = 5/263 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +H  +   G   D    NNLI+++ +   L+ A++ F  +  +    W +++  
Sbjct: 287 LEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAA 346

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y      +  L +  +M       +  T S ++++C+ L     G+ IH  +   GFE +
Sbjct: 347 YAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKD 406

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V +GT+L++MY   G   +A+  F G++ KDV   + MI    + G +E A  +  HL++
Sbjct: 407 VILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALEL-SHLMN 465

Query: 254 -SDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 N+ T ++V+  C     + EG     GL+  FG+ R+       + + G+ G  
Sbjct: 466 LQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWL 525

Query: 312 EEAERMFDAISERNLISWTALIS 334
           +EAE +   +  +  +S+ AL++
Sbjct: 526 KEAEHVLHTMPFK--VSFVALVT 546



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 11/158 (6%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ G+ +H      G + D      L+N+YAK   L  A+K FDG+  +  ++W+++I
Sbjct: 386 GALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMI 445

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS----LLE--DRIFGEQIHAFA 185
                 G  E  L ++  M       NE T S +L ACS    L E  D   G     F 
Sbjct: 446 AASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLS-QDFG 504

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
           I+   EN V      I +   +G  +EAE+V   + +K
Sbjct: 505 IERDEENTV----GFIDLLGRAGWLKEAEHVLHTMPFK 538


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 204/657 (31%), Positives = 350/657 (53%), Gaps = 2/657 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L++G+ +H  +LK G  +DT+  N L++LY     L  A+ +F  M  R A+T+ +LI G
Sbjct: 264 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 323

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               G  E  + +   M+    + + +T + ++ ACS       G+Q+HA+  K GF +N
Sbjct: 324 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 383

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             +  +L+++Y        A + F     ++V   N M++ Y    +   +F +F  +  
Sbjct: 384 NKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 443

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            +  PN YT+ +++  C     +E G+Q+H   +K        V + ++ MY K G  + 
Sbjct: 444 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 503

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +    + ++++SWT +I+GY +     KA+  F + LD GI  D   L   +  C+ 
Sbjct: 504 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 563

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L+ G Q+H  A   G+ SD+    ALV +Y++ G ++ + +  +         +NA+
Sbjct: 564 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 623

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SGF +  + + E+ + +F +    G++ +  TF   +  ++  A + +G+ +HA   KT
Sbjct: 624 VSGFQQ--SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 681

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY ++  V NALI+MYAKCGSI  A + F  +S ++ VSWNA+++AY+ HG G  AL  F
Sbjct: 682 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 741

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           ++M      P+ ++++GVL AC + GL + GI  F  +   YGL P  EH+ C+VD+L R
Sbjct: 742 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 801

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AG LS A   I   P     L+WRTL+S   +  N +    A+  LL+LEP+D+ +++L+
Sbjct: 802 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 861

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           SN+YA     D     R  M +  + KE G SWIE+ + +H F    ++HP ++EI+
Sbjct: 862 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 918



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 174/618 (28%), Positives = 287/618 (46%), Gaps = 22/618 (3%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L  G+ +H+ +LK G  ++   +  L + Y     L  A K+FD M  R+  TW  +
Sbjct: 58  NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 117

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIFGEQIHAFAIK 187
           IK          V G+   M       NE T S +LEAC   S+  D +  EQIHA  + 
Sbjct: 118 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--EQIHARILY 175

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G  ++  V   LI +Y  +G    A  VF GL  KD      MI   +K      A  +
Sbjct: 176 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 235

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +      P  Y F++V+S C +   +E G+QLHGL +K G   +  V NA+V++Y  
Sbjct: 236 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 295

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G    AE +F  +S+R+ +++  LI+G  + G+G KA+  F      G+  DS+ LA++
Sbjct: 296 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 355

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  CS    L  G QLH +  K G+ S+ ++  AL+++YAK  D+++A         +  
Sbjct: 356 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 415

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +N +L  +   + DD  +   +F Q ++  + P+  T+  +L        L  G  +H
Sbjct: 416 VLWNVMLVAY--GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 473

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           +  IKT +  +  V + LI MYAK G +D A+ I    + +D+VSW  M++ Y  +    
Sbjct: 474 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 533

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPIL 601
            AL  F +M   G   D++ +   + AC        G+    E +QI+      G    L
Sbjct: 534 KALTTFRQMLDRGIRSDEVGLTNAVSAC-------AGLQALKEGQQIHAQACVSGFSSDL 586

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
                +V L  R G++ E+      +   ++ + W  LVS  +   N++ ++    R ++
Sbjct: 587 PFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALRVFVR-MN 644

Query: 662 LEPKDAGSFILVSNMYAG 679
            E  D  +F   S + A 
Sbjct: 645 REGIDNNNFTFGSAVKAA 662



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 250/508 (49%), Gaps = 8/508 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           GS    + + +HA +L  G ++ T   N LI+LY++   +D+A+++FDG+ ++   +W +
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G   +      + + CDMY        +  S +L AC  +E    GEQ+H   +K G
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 278

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F ++ +V  +L+S+YFH G    AE++F  ++ +D    N +I   ++ G  E A  +F 
Sbjct: 279 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 338

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +     EP+  T  +++  C  +  +  G+QLH    K G      +  A++ +Y K  
Sbjct: 339 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 398

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG---ICCDSSCLAT 366
             E A   F      N++ W  ++  Y   G      N F  F  +    I  +     +
Sbjct: 399 DIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 455

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++  C    +LELG Q+H   IK  +  +  + + L+D+YAK G L +A  +L  F+ K 
Sbjct: 456 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 515

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +  +++G+ +   DD+   +  F Q    G+  D V  +  +S  A    L  G+ +
Sbjct: 516 VVSWTTMIAGYTQYNFDDK--ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 573

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HA +  +G+++D+   NAL+T+Y++CG I+ ++  F+     D ++WNA++S +   G  
Sbjct: 574 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 633

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQA 574
           + AL +F  M REG   ++ +    ++A
Sbjct: 634 EEALRVFVRMNREGIDNNNFTFGSAVKA 661



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 220/488 (45%), Gaps = 6/488 (1%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           N    LV      G L  GQ +HA+  K G  ++      L+NLYAK   ++ A   F  
Sbjct: 350 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 409

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
             V + + W  ++  Y    D  +   I   M   E   N++T   IL+ C  L D   G
Sbjct: 410 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 469

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           EQIH+  IK+ F+ N +V + LI MY   G    A ++    A KDV     MI  Y + 
Sbjct: 470 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 529

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              + A   F  +L      ++   TN +S C     ++EG+Q+H  A   G   ++   
Sbjct: 530 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 589

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA+VT+Y + G  EE+   F+     + I+W AL+SG+ +SG+  +A+  F+     GI 
Sbjct: 590 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 649

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            ++    + +   S  +N++ G Q+H    K GY S+  +  AL+ +YAK G +  A   
Sbjct: 650 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 709

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               S K    +NAI++ + +     E   +  F Q   + + P+ VT   +LS + S  
Sbjct: 710 FLEVSTKNEVSWNAIINAYSKHGFGSE--ALDSFDQMIHSNVRPNHVTLVGVLS-ACSHI 766

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNA 535
            LV     +  S+ + Y       +   ++ M  + G +  A +  + +  + D + W  
Sbjct: 767 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 826

Query: 536 MLSAYALH 543
           +LSA  +H
Sbjct: 827 LLSACVVH 834


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 204/657 (31%), Positives = 350/657 (53%), Gaps = 2/657 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L++G+ +H  +LK G  +DT+  N L++LY     L  A+ +F  M  R A+T+ +LI G
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               G  E  + +   M+    + + +T + ++ ACS       G+Q+HA+  K GF +N
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 423

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             +  +L+++Y        A + F     ++V   N M++ Y    +   +F +F  +  
Sbjct: 424 NKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 483

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            +  PN YT+ +++  C     +E G+Q+H   +K        V + ++ MY K G  + 
Sbjct: 484 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +    + ++++SWT +I+GY +     KA+  F + LD GI  D   L   +  C+ 
Sbjct: 544 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 603

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L+ G Q+H  A   G+ SD+    ALV +Y++ G ++ + +  +         +NA+
Sbjct: 604 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SGF +  + + E+ + +F +    G++ +  TF   +  ++  A + +G+ +HA   KT
Sbjct: 664 VSGFQQ--SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY ++  V NALI+MYAKCGSI  A + F  +S ++ VSWNA+++AY+ HG G  AL  F
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           ++M      P+ ++++GVL AC + GL + GI  F  +   YGL P  EH+ C+VD+L R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AG LS A   I   P     L+WRTL+S   +  N +    A+  LL+LEP+D+ +++L+
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           SN+YA     D     R  M +  + KE G SWIE+ + +H F    ++HP ++EI+
Sbjct: 902 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 170/583 (29%), Positives = 274/583 (46%), Gaps = 27/583 (4%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L  G+ +H+ +LK G  ++   +  L + Y     L  A K+FD M  R+  TW  +
Sbjct: 98  NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIFGEQIHAFAIK 187
           IK          V G+   M       NE T S +LEAC   S+  D +  EQIHA  + 
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--EQIHARILY 215

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G  ++  V   LI +Y  +G    A  VF GL  KD      MI   +K      A  +
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +      P  Y F++V+S C +   +E G+QLHGL +K G   +  V NA+V++Y  
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G    AE +F  +S+R+ +++  LI+G  + G+G KA+  F      G+  DS+ LA++
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF---SC 424
           +  CS    L  G QLH +  K G+ S+ ++  AL+++YAK  D+++A   LD F     
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA---LDYFLETEV 452

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           +    +N +L  +   + DD  +   +F Q ++  + P+  T+  +L        L  G 
Sbjct: 453 ENVVLWNVMLVAY--GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +H+  IKT +  +  V + LI MYAK G +D A+ I    + +D+VSW  M++ Y  + 
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLR 598
               AL  F +M   G   D++ +   + AC        G+    E +QI+      G  
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSAC-------AGLQALKEGQQIHAQACVSGFS 623

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             L     +V L  R G++ E+      +   ++ + W  LVS
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVS 665



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 250/508 (49%), Gaps = 8/508 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           GS    + + +HA +L  G ++ T   N LI+LY++   +D+A+++FDG+ ++   +W +
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G   +      + + CDMY        +  S +L AC  +E    GEQ+H   +K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F ++ +V  +L+S+YFH G    AE++F  ++ +D    N +I   ++ G  E A  +F 
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +     EP+  T  +++  C  +  +  G+QLH    K G      +  A++ +Y K  
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG---ICCDSSCLAT 366
             E A   F      N++ W  ++  Y   G      N F  F  +    I  +     +
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++  C    +LELG Q+H   IK  +  +  + + L+D+YAK G L +A  +L  F+ K 
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +  +++G+ +   DD+   +  F Q    G+  D V  +  +S  A    L  G+ +
Sbjct: 556 VVSWTTMIAGYTQYNFDDK--ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HA +  +G+++D+   NAL+T+Y++CG I+ ++  F+     D ++WNA++S +   G  
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQA 574
           + AL +F  M REG   ++ +    ++A
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKA 701



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 220/488 (45%), Gaps = 6/488 (1%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           N    LV      G L  GQ +HA+  K G  ++      L+NLYAK   ++ A   F  
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
             V + + W  ++  Y    D  +   I   M   E   N++T   IL+ C  L D   G
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           EQIH+  IK+ F+ N +V + LI MY   G    A ++    A KDV     MI  Y + 
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              + A   F  +L      ++   TN +S C     ++EG+Q+H  A   G   ++   
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA+VT+Y + G  EE+   F+     + I+W AL+SG+ +SG+  +A+  F+     GI 
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            ++    + +   S  +N++ G Q+H    K GY S+  +  AL+ +YAK G +  A   
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               S K    +NAI++ + +     E   +  F Q   + + P+ VT   +LS + S  
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSE--ALDSFDQMIHSNVRPNHVTLVGVLS-ACSHI 806

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNA 535
            LV     +  S+ + Y       +   ++ M  + G +  A +  + +  + D + W  
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866

Query: 536 MLSAYALH 543
           +LSA  +H
Sbjct: 867 LLSACVVH 874


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 211/696 (30%), Positives = 365/696 (52%), Gaps = 9/696 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  D++LG+ +H  ++K G   D F  N L+ +Y K   +D A K+FD M 
Sbjct: 149 FPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP 208

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLEDRIFGE 179
             + ++W S+I  + ++G       +  +M   E    +  T   IL  C+   +   G 
Sbjct: 209 ETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGM 268

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            IH  A+K G    V V  +++ MY   G   EA+  F     K+V   N MI  ++  G
Sbjct: 269 GIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEG 328

Query: 240 ESEMAFHVF--VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           +   AF++   + +   + + N+ T  NV+  C + L +   K+LHG + +    + + +
Sbjct: 329 DVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRH-CFQHVEL 387

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA +  Y K G    AE++F  I ++ + SW ALI G+ ++G   KA++   +    G 
Sbjct: 388 SNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQ 447

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   +++++  C+   +L+ G ++HG+ +++G  +D  +GT+L+  Y   G   SAR+
Sbjct: 448 QPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARV 507

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L D    K    +NA++SG+ +     E   + LF +    G++   +    +    +  
Sbjct: 508 LFDRMKDKNLVSWNAMISGYSQNGLPYES--LALFRKSLSEGIQSHEIAIVSVFGACSQL 565

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           + L  G+  H Y +K     D  VG ++I MYAK G I  + ++F G+ D+++ SWNA++
Sbjct: 566 SALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAII 625

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            A+ +HG GK A+ L+E MK+ G  PD  + +G+L AC ++GL E G+  F E++    +
Sbjct: 626 VAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLI 685

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P LEH+AC++D+L RAGRL +A+ L+N  P      +W +L+   +     +     +K
Sbjct: 686 EPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAK 745

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +LL+LEP  A +++L+SN+YAG G  D   +VR  M ++ L K+AGCSWIE+  +++ FV
Sbjct: 746 KLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFV 805

Query: 718 ASGKDHPESEE---IYSKLDLLNDEMKLKVKDSSAF 750
                 P+S E   I+ +L+    E+  K   SS  
Sbjct: 806 VGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVL 841



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 178/654 (27%), Positives = 305/654 (46%), Gaps = 29/654 (4%)

Query: 73  DLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           D++ G+ +H F+  S   +ND      LI +YA       ++ +FD M  ++ I W +L+
Sbjct: 58  DIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALV 117

Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GY  +G Y  V+ +  D+    + + +  T   +++AC  + D   GE IH   IK G 
Sbjct: 118 SGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGL 177

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             +VFVG +L+ MY   G   EA  VF  +   ++   N MI  +++ G S  +F + + 
Sbjct: 178 VLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLME 237

Query: 251 LLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           +L  +   P+  T   ++ VC     V+ G  +HGLAVK G+  E+ V NA+V MY K G
Sbjct: 238 MLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCG 297

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG--ICCDSSCLATV 367
              EA+  F   + +N++SW  +IS +   G   +A N   E    G  +  +   +  V
Sbjct: 298 YLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNV 357

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C     L    +LHG++ +H +   V L  A +  YAK G L SA  +  G   K  
Sbjct: 358 LPACLDKLQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTV 416

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
           + +NA++ G  +    D    + L  Q   +G +PD  T S LL   A    L  G+ +H
Sbjct: 417 SSWNALIGGHAQN--GDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIH 474

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            Y ++ G   D  VG +L++ Y  CG    A  +F  + D+++VSWNAM+S Y+ +GL  
Sbjct: 475 GYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPY 534

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA-- 605
            +L LF +   EG    +I+I+ V  AC     S+       +    Y L+ +    A  
Sbjct: 535 ESLALFRKSLSEGIQSHEIAIVSVFGAC-----SQLSALRLGKEAHGYVLKALQTEDAFV 589

Query: 606 --CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL- 662
              ++D+  ++G + E+  + +     ++   W  ++    +  + K +I   +R+  + 
Sbjct: 590 GCSIIDMYAKSGCIKESRKVFDGLK-DKNVASWNAIIVAHGIHGHGKEAIELYERMKKVG 648

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           +  D  ++I +       G+++E  K    M +  L          I+ KL H+
Sbjct: 649 QMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNL----------IEPKLEHY 692



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 226/419 (53%), Gaps = 8/419 (1%)

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           ++L+AC   +D   G ++H F   S  + N+  + T LI MY   G   ++  VF  +  
Sbjct: 48  LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQ 281
           K++   N ++  Y + G       VF+ L+S +DF+P+++TF +VI  C   L V  G+ 
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HG+ +K G+V ++ VGNA+V MYGK G  +EA ++FD + E NL+SW ++I  +  +G 
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGF 227

Query: 342 GGKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              + +  +E L + G+  D   + T++  C+    +++G+ +HG A+K G   +V +  
Sbjct: 228 SRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNN 287

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG- 459
           A+V +Y+K G L  A+M     + K    +N ++S F   +  D  +   L  + ++ G 
Sbjct: 288 AMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAF--SLEGDVNEAFNLLQEMQIQGE 345

Query: 460 -MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
            M+ + VT   +L     +  L   + LH YS +  +   V + NA I  YAKCG+++ A
Sbjct: 346 EMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKCGALNSA 404

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
            ++F GI D+ + SWNA++  +A +G  + AL L  +M   G  PD  +I  +L AC +
Sbjct: 405 EKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  368 bits (945), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 212/689 (30%), Positives = 374/689 (54%), Gaps = 11/689 (1%)

Query: 61   WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
            +P ++K   G  D+ +G AVH  ++K+G   D F  N L++ Y     +  A +LFD M 
Sbjct: 545  YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 604

Query: 121  VRSAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKF--NEHTCSVILEACSLLEDRI 176
             R+ ++W S+I+ + D+G  E    +  +M     +  F  +  T   +L  C+   +  
Sbjct: 605  ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 664

Query: 177  FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
             G+ +H +A+K   +  + +  +L+ MY   GC   A+ +F+    K+V   N M+  ++
Sbjct: 665  LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 724

Query: 237  KAGESEMAFHVFVHLLS--SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
              G++   F V   +L+   D + ++ T  N + VC+    +   K+LH  ++K   V  
Sbjct: 725  AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 784

Query: 295  ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
              V NA V  Y K G    A+R+F  I  + + SW ALI G+ +S     +++  L+   
Sbjct: 785  ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 844

Query: 355  LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             G+  DS  + +++  CS   +L LG ++HGF I++    D+ +  +++ +Y   G+L +
Sbjct: 845  SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 904

Query: 415  ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
             + L D    K    +N +++G+++    D    + +F Q  L G++   ++   +    
Sbjct: 905  VQALFDAMEDKSLVSWNTVITGYLQNGFPDR--ALGVFRQMVLYGIQLCGISMMPVFGAC 962

Query: 475  ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
            +    L  GR  HAY++K     D  +  +LI MYAK GSI  + ++F G+ ++   SWN
Sbjct: 963  SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 1022

Query: 535  AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
            AM+  Y +HGL K A+ LFEEM+R G  PDD++ LGVL AC +SGL   G+   ++++  
Sbjct: 1023 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 1082

Query: 595  YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSI 653
            +GL+P L+H+AC++D+LGRAG+L +A+ ++      E+ + +W++L+S  ++  N +   
Sbjct: 1083 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 1142

Query: 654  LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
              + +L +LEP+   +++L+SN+YAG G  ++  KVR  MN++ L K+AGCSWIE++ K+
Sbjct: 1143 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 1202

Query: 714  HHFVASGKDHPESEEIYSKLDLLNDEMKL 742
              FV   +     EEI S   +L  EMK+
Sbjct: 1203 FSFVVGERFLDGFEEIKSLWSIL--EMKI 1229



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/577 (25%), Positives = 275/577 (47%), Gaps = 25/577 (4%)

Query: 64   LVKISIGSGDLKLGQAVHAFLLKSGS---QNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
            L++ S    D+++G+ +H   L SGS   +ND      +I +YA     D ++ +FD + 
Sbjct: 445  LLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 502

Query: 121  VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLEDRIFGE 179
             ++   W ++I  Y  +  Y+ VL    +M  + +   +H T   +++AC+ + D   G 
Sbjct: 503  SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 562

Query: 180  QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
             +H   +K+G   +VFVG +L+S Y   G   +A  +F  +  +++   N MI  ++  G
Sbjct: 563  AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 622

Query: 240  ESEMAFHVFVHLLSSD----FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
             SE +F +   ++  +    F P+  T   V+ VC     +  GK +HG AVK  + +E+
Sbjct: 623  FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 682

Query: 296  SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
             + NA++ MY K G    A+ +F   + +N++SW  ++ G+   G      +   + L  
Sbjct: 683  VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 742

Query: 356  G--ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
            G  +  D   +   +  C   S L    +LH +++K  ++ +  +  A V  YAK G L 
Sbjct: 743  GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 802

Query: 414  SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
             A+ +  G   K    +NA++ G  +  ++D    +    Q +++G+ PD  T   LLS 
Sbjct: 803  YAQRVFHGIRSKTVNSWNALIGGHAQ--SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 860

Query: 474  SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
             +    L  G+ +H + I+     D+ V  +++++Y  CG +     +F  + D+ +VSW
Sbjct: 861  CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 920

Query: 534  NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIE 592
            N +++ Y  +G    AL +F +M   G     IS++ V  AC +   L  G         
Sbjct: 921  NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG------REA 974

Query: 593  QIYGLRPILEH---FAC-MVDLLGRAGRLSEAMNLIN 625
              Y L+ +LE     AC ++D+  + G ++++  + N
Sbjct: 975  HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN 1011



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 215/421 (51%), Gaps = 12/421 (2%)

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           ++L+A    +D   G +IH     S    N+  + T +I+MY   G   ++  VF  L  
Sbjct: 444 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 503

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQ 281
           K++   N +I  Y++    +     F+ ++S+ D  P+ +T+  VI  C     V  G  
Sbjct: 504 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 563

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HGL VK G+V ++ VGNA+V+ YG HG   +A ++FD + ERNL+SW ++I  +  +G 
Sbjct: 564 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 623

Query: 342 GGKAINGFLEFL----DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
             ++     E +    D     D + L TV+  C+    + LG  +HG+A+K     ++ 
Sbjct: 624 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 683

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           L  AL+D+Y+K G + +A+M+    + K    +N ++ GF  +  D      VL  +Q L
Sbjct: 684 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE-GDTHGTFDVL--RQML 740

Query: 458 AGME---PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
           AG E    D VT    + +   ++ L   + LH YS+K  +  + +V NA +  YAKCGS
Sbjct: 741 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 800

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +  A ++F GI  + + SWNA++  +A     + +L    +MK  G  PD  ++  +L A
Sbjct: 801 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 860

Query: 575 C 575
           C
Sbjct: 861 C 861



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 143/323 (44%), Gaps = 46/323 (14%)

Query: 54   RTLLFNDWPQLVKISIGSGD-----------------------------------LKLGQ 78
            R+   N W  L+     S D                                   L+LG+
Sbjct: 812  RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 871

Query: 79   AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
             VH F++++  + D F   ++++LY     L   Q LFD M  +S ++W ++I GYL +G
Sbjct: 872  EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG 931

Query: 139  DYESVLGIACDMYRSEEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
              +  LG+    +R    +    C +    +  ACSLL     G + HA+A+K   E++ 
Sbjct: 932  FPDRALGV----FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA 987

Query: 195  FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            F+  SLI MY  +G   ++  VF GL  K     N MI+ Y   G ++ A  +F  +  +
Sbjct: 988  FIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRT 1047

Query: 255  DFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+D TF  V++ C  +  + EG + L  +   FG+   +     ++ M G+ G  ++
Sbjct: 1048 GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDK 1107

Query: 314  AERMF--DAISERNLISWTALIS 334
            A R+   +   E ++  W +L+S
Sbjct: 1108 ALRVVAEEMSEEADVGIWKSLLS 1130


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 207/657 (31%), Positives = 352/657 (53%), Gaps = 2/657 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L++G+ +H  +LK G  +DT+  N L++LY     L  A+ +F  M  R A+T+ +LI G
Sbjct: 287 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLING 346

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               G  E  + +   M     + + +T + ++ ACS       G+Q+HA+  K GF +N
Sbjct: 347 LSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASN 406

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             +  +L+++Y        A N F     ++V   N M++ Y    +   +F +F  +  
Sbjct: 407 DKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 466

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            +  PN YT+ +++  C     +E G+Q+H   +K        V + ++ MY K G  + 
Sbjct: 467 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDT 526

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +    + ++++SWT +I+GY +     KA+  F + LD GI  D   L   +  C+ 
Sbjct: 527 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 586

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L+ G Q+H  A   G+ SD+    ALV +Y+K G+++ A +  +         +NA+
Sbjct: 587 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNAL 646

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SGF +  + + E+ + +F++    G++ +  TF   +  ++  A + +G+ +HA   KT
Sbjct: 647 VSGFQQ--SGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKT 704

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY ++  V NA+I+MYAKCGSI  A + F  +S ++ VSWNAM++AY+ HG G  AL  F
Sbjct: 705 GYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSF 764

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           ++M      P+ ++++GVL AC + GL + GI  F  +   YGL P  EH+ C+VD+L R
Sbjct: 765 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTR 824

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AG LS A + I   P     L+WRTL+S   +  N +    A+  LL+LEP+D+ +++L+
Sbjct: 825 AGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 884

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           SN+YA     D     R  M +  + KE G SWIE+ + +H F    ++HP ++EI+
Sbjct: 885 SNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 941



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 176/618 (28%), Positives = 287/618 (46%), Gaps = 22/618 (3%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L  G+ +H+ +LK G  N+   +  L++ Y     LD A K+FD M  R+  TW  +
Sbjct: 81  NGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKM 140

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIFGEQIHAFAIK 187
           IK          V  +   M       NE T S +LEAC   S+  D +  EQIHA  I 
Sbjct: 141 IKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVV--EQIHARIIY 198

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G   +  V   LI +Y  +G    A  VF GL  KD      MI   +K      A  +
Sbjct: 199 QGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRL 258

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +      P  Y F++V+S C +   +E G+QLHGL +K G   +  V NA+V++Y  
Sbjct: 259 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 318

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G    AE +F  +S+R+ +++  LI+G  + G+G KA+  F      G+  DS+ LA++
Sbjct: 319 LGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASL 378

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  CS    L  G QLH +  K G+ S+ ++  AL+++YAK  D+++A         +  
Sbjct: 379 VVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENV 438

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +N +L  +   + DD  +   +F Q ++  + P+  T+  +L        L  G  +H
Sbjct: 439 VLWNVMLVAY--GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 496

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           +  IKT +  +  V + LI MYAK G +D A+ I    + +D+VSW  M++ Y  +    
Sbjct: 497 SQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 556

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPIL 601
            AL  F +M   G   D++ +   + AC        G+    E +QI+      G    L
Sbjct: 557 KALTTFRQMLDRGIRSDEVGLTNAVSAC-------AGLQALKEGQQIHAQACVSGFSSDL 609

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
                +V L  + G + EA      +   ++ + W  LVS  +   N++ ++    R ++
Sbjct: 610 PFQNALVTLYSKCGNIEEAYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALRVFAR-MN 667

Query: 662 LEPKDAGSFILVSNMYAG 679
            E  D+ +F   S + A 
Sbjct: 668 REGIDSNNFTFGSAVKAA 685



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 248/508 (48%), Gaps = 8/508 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           GS    + + +HA ++  G    T   N LI+LY++   +D A+++FDG+ ++   +W +
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G   +      + + CDMY        +  S +L AC  +E    GEQ+H   +K G
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 301

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F ++ +V  +L+S+YFH G    AE++F  ++ +D    N +I   ++ G  E A  +F 
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 361

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +     EP+  T  +++  C  +  +  G+QLH    K G      +  A++ +Y K  
Sbjct: 362 RMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCS 421

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG---ICCDSSCLAT 366
             E A   F      N++ W  ++  Y   G      N F  F  +    I  +     +
Sbjct: 422 DIETALNYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 478

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++  C    +LELG Q+H   IK  +  +  + + L+D+YAK G L +A  +L  F+ K 
Sbjct: 479 ILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 538

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +  +++G+ +   DD+   +  F Q    G+  D V  +  +S  A    L  G+ +
Sbjct: 539 VVSWTTMIAGYTQYNFDDK--ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 596

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HA +  +G+++D+   NAL+T+Y+KCG+I+ A+  F+     D ++WNA++S +   G  
Sbjct: 597 HAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNN 656

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQA 574
           + AL +F  M REG   ++ +    ++A
Sbjct: 657 EEALRVFARMNREGIDSNNFTFGSAVKA 684



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 221/488 (45%), Gaps = 6/488 (1%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           N    LV      G L  GQ +HA+  K G + ND  E   L+NLYAK + ++ A   F 
Sbjct: 373 NTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGA-LLNLYAKCSDIETALNYFL 431

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
              V + + W  ++  Y    D  +   I   M   E   N++T   IL+ C  L D   
Sbjct: 432 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 491

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           GEQIH+  IK+ F+ N +V + LI MY   G    A ++    A KDV     MI  Y +
Sbjct: 492 GEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 551

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
               + A   F  +L      ++   TN +S C     ++EG+Q+H  A   G   ++  
Sbjct: 552 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 611

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA+VT+Y K G  EEA   F+     + I+W AL+SG+ +SG+  +A+  F      GI
Sbjct: 612 QNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGI 671

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             ++    + +   S  +N++ G Q+H    K GY S+  +  A++ +YAK G +  A+ 
Sbjct: 672 DSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKK 731

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
                S K    +NA+++ + +     E   +  F Q   + + P+ VT   +LS  +  
Sbjct: 732 QFLELSMKNEVSWNAMINAYSKHGFGSE--ALDSFDQMIHSNVRPNHVTLVGVLSACSHI 789

Query: 478 ACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ-IFKGISDRDIVSWNA 535
             + +G     + + + G A        ++ M  + G +  A   I +   + D + W  
Sbjct: 790 GLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRT 849

Query: 536 MLSAYALH 543
           +LSA  +H
Sbjct: 850 LLSACVVH 857


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 211/624 (33%), Positives = 341/624 (54%), Gaps = 5/624 (0%)

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           D   V   I+   ++ GYL  G Y ++L    DM  S+ + ++ T  ++L     L+   
Sbjct: 280 DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLA 339

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+Q+H  A+K G +  + V  SLI+MY        A  VF  ++ +D+   N +I    
Sbjct: 340 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIA 399

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREI 295
           ++     A  +F+ LL    +P+ YT T+V+        G+   KQ+H  A+K   V + 
Sbjct: 400 QSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADS 459

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V  A++  Y ++   +EAE +F   +  +L++W A++SGY +S  G K +  F      
Sbjct: 460 FVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQ 518

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   D   LATV+  C     +  G Q+H +AIK GY  D+ + + ++D+Y K GD+ +A
Sbjct: 519 GERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 578

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           +   D         +  ++SG +E    +EE  + +FSQ RL G+ PD  T + L   S+
Sbjct: 579 QFAFDSIPVPDDVAWTTLISGCIEN--GEEERALHVFSQMRLMGVLPDEFTIATLAKASS 636

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
               L +GR +HA ++K    +D  VG +L+ MYAKCGSID A+ +FK I   +I +WNA
Sbjct: 637 CLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNA 696

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ML   A HG GK AL LF++M+  G  PD ++ +GVL AC +SGL          + + Y
Sbjct: 697 MLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDY 756

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           G++P +EH++C+ D LGRAG + EA NLI+S     S  ++RTL++  ++  +++     
Sbjct: 757 GIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRV 816

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           + +LL+LEP D+ +++L+SNMYA     DE    RT M   ++ K+ G SWIE+ +K+H 
Sbjct: 817 ATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHL 876

Query: 716 FVASGKDHPESEEIYSKL-DLLND 738
           FV   + +P++E IY K+ D++ D
Sbjct: 877 FVVDDRSNPQTELIYKKVKDMIRD 900



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 165/643 (25%), Positives = 299/643 (46%), Gaps = 44/643 (6%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K+ + SG +   ++ H +  K G   D F A  L+N+Y KF ++   + LF+ M  R 
Sbjct: 158 MLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRD 217

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W  ++K YL+ G  E  + ++   + S    NE T  ++         RI G+   A
Sbjct: 218 VVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLL--------SRISGDDSEA 269

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +KS FEN                   +A       A  ++   N ++  Y  AG+   
Sbjct: 270 GQVKS-FENG-----------------NDAS------AVSEIISRNKILSGYLHAGQYSA 305

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
               F+ ++ SD E +  TF  V++       +  G+Q+H +A+K G+   ++V N+++ 
Sbjct: 306 LLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLIN 365

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K      A  +F+ +SER+LISW ++I+G  +S    +A+  F++ L  G+  D   
Sbjct: 366 MYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYT 425

Query: 364 LATVIDGC-SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           + +V+    S+   L L  Q+H  AIK   ++D  + TAL+D Y++   +K A +L    
Sbjct: 426 MTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRN 485

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
           +    A +NA++SG+ +  + D    + LF+     G   D  T + +L        + +
Sbjct: 486 NFDLVA-WNAMMSGYTQ--SHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQ 542

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +HAY+IK+GY  D+ V + ++ MY KCG +  A   F  I   D V+W  ++S    
Sbjct: 543 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIE 602

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQA--CIYSGLSEGGICLFNEIEQIYGLRPI 600
           +G  + AL +F +M+  G  PD+ +I  + +A  C+ + L +G     N ++      P 
Sbjct: 603 NGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCL-TALEQGRQIHANALKLNCTSDPF 661

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL-MANSKFSILASKRL 659
           +     +VD+  + G + +A  L               LV +++         +      
Sbjct: 662 VG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMES 719

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAK-VRTTMNDLRLSKE 701
           L ++P D  +FI V +  +  G++ EA K +R+   D  +  E
Sbjct: 720 LGIKP-DKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPE 761



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 270/590 (45%), Gaps = 55/590 (9%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
            ++ +I + DL LG+  HA +L      + F  NNLI++Y+K   L  A+++FD M  R 
Sbjct: 52  FLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERD 111

Query: 124 AITWTSLIKGYLD--DGDYESVLG--IACDMYRSEEKFNEH-TCSVILEACSLLEDRIFG 178
            ++W S++  Y    +G  E+V    +   + R +  +    T S +L+ C         
Sbjct: 112 LVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCAS 171

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           E  H +A K G + + FV  +L+++Y   G  +E   +F  + Y+DV   N M+  Y + 
Sbjct: 172 ESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEM 231

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G  E A  +     +S   PN+ T   +              ++ G   + G V+    G
Sbjct: 232 GFKEEAIDLSSAFHTSGLHPNEITLRLL-------------SRISGDDSEAGQVKSFENG 278

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N                   DA +   +IS   ++SGY+ +G     +  F++ ++  + 
Sbjct: 279 N-------------------DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLE 319

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
           CD      V+       +L LG Q+H  A+K G    + +  +L+++Y K   +  AR +
Sbjct: 320 CDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTV 379

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS-Q 477
            +  S +    +N++++G  +  +D E + + LF Q    G++PD  T + +L  ++S  
Sbjct: 380 FNNMSERDLISWNSVIAGIAQ--SDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLP 437

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L   + +H ++IKT   AD  V  ALI  Y++   +  A  +F G ++ D+V+WNAM+
Sbjct: 438 EGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMM 496

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY-- 595
           S Y     G   L LF  M ++G   DD ++  VL+ C       G +   N+ +Q++  
Sbjct: 497 SGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTC-------GFLFAINQGKQVHAY 549

Query: 596 ----GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               G    L   + ++D+  + G +S A    +S P  +  + W TL+S
Sbjct: 550 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD-VAWTTLIS 598



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 128/247 (51%), Gaps = 1/247 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VHA+ +KSG   D + ++ ++++Y K   +  AQ  FD + V   + WT+LI G ++
Sbjct: 543 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIE 602

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G+ E  L +   M       +E T + + +A S L     G QIHA A+K    ++ FV
Sbjct: 603 NGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFV 662

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GTSL+ MY   G   +A  +F+ +   ++   N M++   + GE + A  +F  + S   
Sbjct: 663 GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGI 722

Query: 257 EPNDYTFTNVISVC-YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           +P+  TF  V+S C +  L  E  K +  +   +G+  EI   + +    G+ G+ +EAE
Sbjct: 723 KPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAE 782

Query: 316 RMFDAIS 322
            + D++S
Sbjct: 783 NLIDSMS 789



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 4/209 (1%)

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           C   + D  S  S+L LG   H   +      +  L   L+ +Y+K G L  AR + D  
Sbjct: 49  CFGFLRDAIST-SDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKM 107

Query: 423 SCKYTAEFNAILSGFM---EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
             +    +N+IL+ +    E + ++ ++  +LF   R   +    +T S +L L      
Sbjct: 108 PERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 167

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           +    S H Y+ K G   D  V  AL+ +Y K G +     +F+ +  RD+V WN ML A
Sbjct: 168 VCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKA 227

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISI 568
           Y   G  + A+ L       G  P++I++
Sbjct: 228 YLEMGFKEEAIDLSSAFHTSGLHPNEITL 256


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 220/675 (32%), Positives = 354/675 (52%), Gaps = 5/675 (0%)

Query: 71   SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
            +G L+  + VH+  + +G   D    N L+++YAK   +D A+ +FDGM  R   +WT +
Sbjct: 333  AGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVM 392

Query: 131  IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI--FGEQIHAFAIKS 188
            I G    G  +    +   M R+    N  T   IL A ++       + + +H  A ++
Sbjct: 393  IGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEA 452

Query: 189  GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            GF +++ +G +LI MY   G   +A  VF G+  +DV   N M+    + G    AF VF
Sbjct: 453  GFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVF 512

Query: 249  VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
            + +      P+  T+ ++++       +E   ++H  AV+ G++ +  VG+A + MY + 
Sbjct: 513  LQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRC 572

Query: 309  GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
            G  ++A  +FD +S R++ +W A+I G  +   G +A++ FL+    G   D++    ++
Sbjct: 573  GSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINIL 632

Query: 369  DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
                    LE   ++H  A   G L D+R+G ALV  Y+K G++K A+ + D    +   
Sbjct: 633  SANVDEEALEWVKEVHSHATDAG-LVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVT 691

Query: 429  EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
             +  ++ G  +       D    F Q    G+ PD  T+  +LS  AS   L   + +H 
Sbjct: 692  TWTMMIGGLAQHGCG--HDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHN 749

Query: 489  YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            +++  G  +D+ VGNAL+ MYAKCGSID A  +F  + +RD+ SW  M+   A HG G  
Sbjct: 750  HAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLE 809

Query: 549  ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
            AL  F +MK EGF P+  S + VL AC ++GL + G   F  + Q YG+ P +EH+ CMV
Sbjct: 810  ALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMV 869

Query: 609  DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
            DLLGRAG L EA   I + P       W  L+       N + +  A+K  L L+PK A 
Sbjct: 870  DLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSAS 929

Query: 669  SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            +++L+SN+YA  G  ++   VR+ M    + KE G SWIE+D+++H FV     HPES+E
Sbjct: 930  TYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKE 989

Query: 729  IYSKLDLLNDEMKLK 743
            IY++L+ L + +K K
Sbjct: 990  IYAQLNDLIERLKAK 1004



 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 165/504 (32%), Positives = 282/504 (55%), Gaps = 4/504 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D+ L + VH  ++KSG + + + AN L+ +Y +  RL  A+++FD +L ++   WT++I 
Sbjct: 133 DILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIG 192

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY + G  E  + +   M +   + NE T   IL+AC    +  +G++IHA  I+SGF++
Sbjct: 193 GYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQS 252

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +V V T+L++MY   G   +A+ +F  +  ++V     MI      G  + AFH+F+ + 
Sbjct: 253 DVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQ 312

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              F PN YT+ ++++       +E  K++H  AV  G+  ++ VGNA+V MY K G  +
Sbjct: 313 REGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSID 372

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A  +FD ++ER++ SWT +I G  + G G +A + FL+    G   + +   ++++  +
Sbjct: 373 DARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASA 432

Query: 373 VCSN--LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           + S   LE    +H  A + G++SD+R+G AL+ +YAK G +  AR++ DG   +    +
Sbjct: 433 IASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISW 492

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NA++ G  +     E     +F Q +  G+ PD  T+  LL+   S   L     +H ++
Sbjct: 493 NAMMGGLAQNGCGHE--AFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHA 550

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           ++TG  +D  VG+A I MY +CGSID A  +F  +S R + +WNAM+   A    G+ AL
Sbjct: 551 VETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREAL 610

Query: 551 LLFEEMKREGFAPDDISILGVLQA 574
            LF +M+REGF PD  + + +L A
Sbjct: 611 SLFLQMQREGFIPDATTFINILSA 634



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/410 (32%), Positives = 225/410 (54%), Gaps = 4/410 (0%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           IL+ C   ED +  +Q+H   IKSG E N++V   L+ +Y   G  + A  VF  L  K+
Sbjct: 124 ILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKN 183

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +     MI  Y + G +E A  V+  +     +PN+ T+ +++  C   + ++ GK++H 
Sbjct: 184 IYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHA 243

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             ++ G   ++ V  A+V MY K G  E+A+ +FD + ERN+ISWT +I G    G G +
Sbjct: 244 HIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQE 303

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A + FL+    G   +S    ++++  +    LE   ++H  A+  G   D+R+G ALV 
Sbjct: 304 AFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVH 363

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +YAK G +  AR++ DG + +    +  ++ G  +      ++   LF Q +  G  P+ 
Sbjct: 364 MYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH--GRGQEAFSLFLQMQRNGCLPNL 421

Query: 465 VTFSRLLSLS--ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
            T+  +L+ S  AS + L   + +H ++ + G+ +D+ +GNALI MYAKCGSID A  +F
Sbjct: 422 TTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVF 481

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
            G+ DRD++SWNAM+   A +G G  A  +F +M++EG  PD  + L +L
Sbjct: 482 DGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 170/316 (53%), Gaps = 2/316 (0%)

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           + +++ N++  C +   +   KQ+H   +K G+ + + V N ++ +Y + G  + A ++F
Sbjct: 117 DSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVF 176

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           D + ++N+  WT +I GY   GH   A+  + +        +     +++  C    NL+
Sbjct: 177 DKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLK 236

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
            G ++H   I+ G+ SDVR+ TALV++Y K G ++ A+++ D    +    +  ++ G  
Sbjct: 237 WGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLA 296

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
                  ++   LF Q +  G  P+  T+  +L+ +AS   L   + +H++++  G A D
Sbjct: 297 HY--GRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALD 354

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           + VGNAL+ MYAK GSID A  +F G+++RDI SW  M+   A HG G+ A  LF +M+R
Sbjct: 355 LRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQR 414

Query: 559 EGFAPDDISILGVLQA 574
            G  P+  + L +L A
Sbjct: 415 NGCLPNLTTYLSILNA 430



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 2/227 (0%)

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           GI  DS     ++  C    ++ L  Q+H   IK G   ++ +   L+ +Y + G L+ A
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCA 172

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R + D    K    +  ++ G+ E      ED M ++ + R    +P+ +T+  +L    
Sbjct: 173 RQVFDKLLKKNIYIWTTMIGGYAEY--GHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
               L  G+ +HA+ I++G+ +DV V  AL+ MY KCGSI+ A  IF  + +R+++SW  
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           M+   A +G G+ A  LF +M+REGF P+  + + +L A   +G  E
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 78/147 (53%), Gaps = 2/147 (1%)

Query: 431 NAILSGFMEKIAD--DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           NA + G  E+  +    +D + +   +   G+  D  ++  +L     Q  ++  + +H 
Sbjct: 83  NASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHV 142

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             IK+G   ++ V N L+ +Y +CG +  A Q+F  +  ++I  W  M+  YA +G  + 
Sbjct: 143 CIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAED 202

Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC 575
           A+ ++++M++E   P++I+ L +L+AC
Sbjct: 203 AMRVYDKMRQECGQPNEITYLSILKAC 229


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  368 bits (944), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 212/689 (30%), Positives = 374/689 (54%), Gaps = 11/689 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  D+ +G AVH  ++K+G   D F  N L++ Y     +  A +LFD M 
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKF--NEHTCSVILEACSLLEDRI 176
            R+ ++W S+I+ + D+G  E    +  +M     +  F  +  T   +L  C+   +  
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+ +H +A+K   +  + +  +L+ MY   GC   A+ +F+    K+V   N M+  ++
Sbjct: 310 LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 369

Query: 237 KAGESEMAFHVFVHLLS--SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
             G++   F V   +L+   D + ++ T  N + VC+    +   K+LH  ++K   V  
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
             V NA V  Y K G    A+R+F  I  + + SW ALI G+ +S     +++  L+   
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G+  DS  + +++  CS   +L LG ++HGF I++    D+ +  +++ +Y   G+L +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            + L D    K    +N +++G+++    D    + +F Q  L G++   ++   +    
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDR--ALGVFRQMVLYGIQLCGISMMPVFGAC 607

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           +    L  GR  HAY++K     D  +  +LI MYAK GSI  + ++F G+ ++   SWN
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM+  Y +HGL K A+ LFEEM+R G  PDD++ LGVL AC +SGL   G+   ++++  
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSI 653
           +GL+P L+H+AC++D+LGRAG+L +A+ ++      E+ + +W++L+S  ++  N +   
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
             + +L +LEP+   +++L+SN+YAG G  ++  KVR  MN++ L K+AGCSWIE++ K+
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 847

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMKL 742
             FV   +     EEI S   +L  EMK+
Sbjct: 848 FSFVVGERFLDGFEEIKSLWSIL--EMKI 874



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/577 (25%), Positives = 275/577 (47%), Gaps = 25/577 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGS---QNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           L++ S    D+++G+ +H   L SGS   +ND      +I +YA     D ++ +FD + 
Sbjct: 90  LLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 147

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLEDRIFGE 179
            ++   W ++I  Y  +  Y+ VL    +M  + +   +H T   +++AC+ + D   G 
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            +H   +K+G   +VFVG +L+S Y   G   +A  +F  +  +++   N MI  ++  G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267

Query: 240 ESEMAFHVFVHLLSSD----FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            SE +F +   ++  +    F P+  T   V+ VC     +  GK +HG AVK  + +E+
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            + NA++ MY K G    A+ +F   + +N++SW  ++ G+   G      +   + L  
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387

Query: 356 G--ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
           G  +  D   +   +  C   S L    +LH +++K  ++ +  +  A V  YAK G L 
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            A+ +  G   K    +NA++ G  +  ++D    +    Q +++G+ PD  T   LLS 
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQ--SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +    L  G+ +H + I+     D+ V  +++++Y  CG +     +F  + D+ +VSW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIE 592
           N +++ Y  +G    AL +F +M   G     IS++ V  AC +   L  G         
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG------REA 619

Query: 593 QIYGLRPILEH---FAC-MVDLLGRAGRLSEAMNLIN 625
             Y L+ +LE     AC ++D+  + G ++++  + N
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN 656



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 215/421 (51%), Gaps = 12/421 (2%)

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           ++L+A    +D   G +IH     S    N+  + T +I+MY   G   ++  VF  L  
Sbjct: 89  LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQ 281
           K++   N +I  Y++    +     F+ ++S+ D  P+ +T+  VI  C     V  G  
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HGL VK G+V ++ VGNA+V+ YG HG   +A ++FD + ERNL+SW ++I  +  +G 
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268

Query: 342 GGKAINGFLEFL----DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
             ++     E +    D     D + L TV+  C+    + LG  +HG+A+K     ++ 
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           L  AL+D+Y+K G + +A+M+    + K    +N ++ GF  +  D      VL  +Q L
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE-GDTHGTFDVL--RQML 385

Query: 458 AGME---PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
           AG E    D VT    + +   ++ L   + LH YS+K  +  + +V NA +  YAKCGS
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +  A ++F GI  + + SWNA++  +A     + +L    +MK  G  PD  ++  +L A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505

Query: 575 C 575
           C
Sbjct: 506 C 506



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 143/323 (44%), Gaps = 46/323 (14%)

Query: 54  RTLLFNDWPQLVKISIGSGD-----------------------------------LKLGQ 78
           R+   N W  L+     S D                                   L+LG+
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
            VH F++++  + D F   ++++LY     L   Q LFD M  +S ++W ++I GYL +G
Sbjct: 517 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG 576

Query: 139 DYESVLGIACDMYRSEEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
             +  LG+    +R    +    C +    +  ACSLL     G + HA+A+K   E++ 
Sbjct: 577 FPDRALGV----FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA 632

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           F+  SLI MY  +G   ++  VF GL  K     N MI+ Y   G ++ A  +F  +  +
Sbjct: 633 FIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRT 692

Query: 255 DFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              P+D TF  V++ C  +  + EG + L  +   FG+   +     ++ M G+ G  ++
Sbjct: 693 GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDK 752

Query: 314 AERMF--DAISERNLISWTALIS 334
           A R+   +   E ++  W +L+S
Sbjct: 753 ALRVVAEEMSEEADVGIWKSLLS 775


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 228/681 (33%), Positives = 369/681 (54%), Gaps = 9/681 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           ++K+     D  LG+ +H   ++ G  + D     +L+++Y K++ +   +K+F+ M  R
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + +TWTSL+ GY+ DG    V+ +   M       N  T + +L   +       G ++H
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A ++K G  + VFV  SL++MY   G   EA  VF G+  +D+   N ++      G   
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  +F    SS       T+  VI +C     +   +QLH   +K G     +V  A++
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALM 348

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
             Y K G    A  +F  +S  +N++SWTA+I+G +++G    A   F    + G+  + 
Sbjct: 349 DAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPND 408

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
              +T++   SV S   L  Q+H   IK  Y     +GTAL+  Y+K  + + A  +   
Sbjct: 409 FTYSTILTA-SVAS---LPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKM 464

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    ++A+L+ + +  A D +    +F +  + G++P+  T S ++   AS    V
Sbjct: 465 IDQKDVVSWSAMLTCYAQ--AGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGV 522

Query: 482 R-GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             GR  HA SIK      + V +AL++MYA+ GSI+ A  IF+  +DRD+VSWN+MLS Y
Sbjct: 523 DLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGY 582

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           A HG  + AL +F +M+ EG   D ++ L V+  C ++GL E G   F+ + + YG+ P 
Sbjct: 583 AQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPT 642

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+ACMVDL  RAG+L EAM+LI    F   P++WRTL+   K+  N +   LA+++LL
Sbjct: 643 MEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLL 702

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
            LEP D+ +++L+SN+Y+  G   E  +VR  M+  ++ KEAGCSWI+I +K+H F+AS 
Sbjct: 703 SLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASD 762

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
           K HP SE+IY+KL  +  ++K
Sbjct: 763 KSHPLSEQIYAKLRAMTTKLK 783


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 211/683 (30%), Positives = 366/683 (53%), Gaps = 16/683 (2%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQ-------NDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           I   + KL   V A  +    Q        +T   N +++ Y K   L  A++LF+ M  
Sbjct: 46  ISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFS 105

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL---EACSLLEDRIFG 178
           R+ ++WT +I GY  +   +    +  +M RS  K +  T + +L   +  + L++ +  
Sbjct: 106 RNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVL-- 163

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            QIH+  I+ GF  ++ V  SL+  Y  + C   A  +F  +  KD    N MI  Y K 
Sbjct: 164 -QIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKY 222

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G  E A  +F+ + + DF+P+ +TF  ++ +   +  V  G+Q+HGLA+K   V +I V 
Sbjct: 223 GFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVA 282

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA++  Y KH   + A+ +FD + E + +S+  +I+GY  +G   K+ + F         
Sbjct: 283 NALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFD 342

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
             +   AT++   ++  NL +G Q H  A+    +S+V++G ALVD+YAK    + A  +
Sbjct: 343 RKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRI 402

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               + + +  + AI+S +++K     E+ + +F +     +  D  TF+  L  SA+ A
Sbjct: 403 FANLAYRNSVPWTAIISIYVQK--GFHEEALKMFKEMNRENVHGDQATFASTLKASANLA 460

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            +  G+ LH+  I+ G  + V  G+ L+ MYA CGS+  A ++FK + DR+IV WNA++S
Sbjct: 461 SVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALIS 520

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           AY+ +G  +     F +M   G  PD +S L VL AC + GL E  +  FN + Q+Y L 
Sbjct: 521 AYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLD 580

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P  +H+A M+D+L R+GR +EA NLI+  PF    ++W ++++  ++  N   +  A+ +
Sbjct: 581 PRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQ 640

Query: 659 LLDLEP-KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           L  ++  +DA +++ +SN+YA  G  + AAKV+  M +  + K    SW+EID ++H F 
Sbjct: 641 LFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFT 700

Query: 718 ASGKDHPESEEIYSKLDLLNDEM 740
           A+ + HP++E+I  K++ L + M
Sbjct: 701 ANDRTHPQTEQIRRKINSLVELM 723



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 168/358 (46%), Gaps = 3/358 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ +S+GS D+  GQ +H   +K+    D F AN L++ Y+K + +D+A+ LFD M    
Sbjct: 250 MLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELD 309

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++  +I GY  +G YE    +   +  +         + +L   ++  +   G Q HA
Sbjct: 310 GVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHA 369

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            A+ +   + V VG +L+ MY     F +A  +F  LAY++      +I  Y + G  E 
Sbjct: 370 QAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEE 429

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +   +   +  TF + +        V  GKQLH   ++ G++  +  G+ +V 
Sbjct: 430 ALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVD 489

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY   G  ++A  +F  + +RN++ W ALIS Y ++G      + F + ++ G+  DS  
Sbjct: 490 MYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVS 549

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLL 419
             +V+  CS    +E  L     ++   Y  D R      ++D+  + G    A  L+
Sbjct: 550 FLSVLTACSHRGLVEKALWYFN-SMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLI 606


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 208/668 (31%), Positives = 359/668 (53%), Gaps = 5/668 (0%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            GQ +HA  +  G   + F  ++LINLYAK      A+ +FD    ++ + W +++ G++ 
Sbjct: 354  GQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 413

Query: 137  DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            +   E  + +   M R   + +E T   IL AC+ L     G+Q+H   IK+  + ++FV
Sbjct: 414  NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 473

Query: 197  GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              + + MY   G   +A+ +F  + YKD    N + +   +  E E A  +   +     
Sbjct: 474  ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 533

Query: 257  EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
             P+D +F+  I+ C      E GKQ+H LA+K+G+    +VG++++ +Y KHG  E + +
Sbjct: 534  TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 593

Query: 317  MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            +F  +   +++   ALI+G+V++ +  +AI  F + L  G+   S   ++++ GCS   N
Sbjct: 594  IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN 653

Query: 377  LELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAIL 434
              +G Q+H + +K G L  D  LG +L  IY K   L+ A  LL      K   E+ AI+
Sbjct: 654  SAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAII 713

Query: 435  SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
            SG+ +    D    +V F + R   +  D  TF+ +L   +       G+ +H    K+G
Sbjct: 714  SGYAQNGYGDHS--LVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSG 771

Query: 495  YAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLF 553
            + +     +ALI MY+KCG +  +F+ FK + ++ DI+ WN+M+  +A +G    ALLLF
Sbjct: 772  FGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLF 831

Query: 554  EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            ++M+     PD+++ LGVL AC +SGL   G   F  + ++YGL P L+H+AC +DLLGR
Sbjct: 832  QKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGR 891

Query: 614  AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
             G L EA   I+  PF    ++W T ++  ++  + +   +A+++L++LEP+ + +++L+
Sbjct: 892  GGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLL 951

Query: 674  SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
            S+++A  G   EA   R +M +  ++K  GCSWI + +K   F+   K HP++  IY  L
Sbjct: 952  SSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEML 1011

Query: 734  DLLNDEMK 741
              L   MK
Sbjct: 1012 GDLTGMMK 1019



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 273/539 (50%), Gaps = 11/539 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++      G  +   A+ + + K GS  D      +I+  A   RLD A  L   M 
Sbjct: 237 WSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMP 296

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
             S + W ++I G+   G   +VLG+  DM          T + +L A + ++  + G+Q
Sbjct: 297 TPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQ 356

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +HA A+  G + NVFVG+SLI++Y   GC  +A+NVF     K++   N M+  + +   
Sbjct: 357 MHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNEL 416

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  +F +++    + +++TF +++  C        GKQ+H + +K  +   + V NA
Sbjct: 417 PEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANA 476

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
            + MY K+G   +A+ +F  I  ++ ISW AL  G  ++    +A+         GI  D
Sbjct: 477 TLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPD 536

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               +T I+ CS     E G Q+H  AIK+G  S+  +G++L+D+Y+K GD++S+R +  
Sbjct: 537 DVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFA 596

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                     NA+++GF++   ++E++ + LF Q    G++P  VTFS +LS  +     
Sbjct: 597 QVDASSIVPINALIAGFVQN--NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNS 654

Query: 481 VRGRSLHAYSIKTGYAA-DVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLS 538
             G+ +H Y++K+G    D ++G +L  +Y K   ++ A ++   + D +++  W A++S
Sbjct: 655 AIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIIS 714

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            YA +G G  +L+ F  M+      D+ +   VL+AC         +  F + ++I+GL
Sbjct: 715 GYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKAC-------SDVTAFADGKEIHGL 766



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 222/503 (44%), Gaps = 46/503 (9%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           +A+H  +L+ GS       ++L+ LY K  R+  A         R++   +SL+  +   
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145

Query: 138 GDYESVLG----IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           G    VLG    I C      ++F     +V+L ACS +    +G Q+H   +KSGF ++
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFG---LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 202

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VF   +L+ MY   G    A  VF G+A  D  C + MI  Y++ G  + A  +F  +  
Sbjct: 203 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDK 262

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+  T   +IS                                        G  + 
Sbjct: 263 MGSAPDQVTLVTIIST-----------------------------------LASSGRLDH 287

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +   +   + ++W A+ISG+ +SG     +  + +    G+    S  A+++   + 
Sbjct: 288 ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAAN 347

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFNA 432
                 G Q+H  A+ HG  ++V +G++L+++YAK G    A+ + D  SC K    +NA
Sbjct: 348 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNA 406

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +L+GF++   +  E+ + +F       ++ D  TF  +L      +    G+ +H  +IK
Sbjct: 407 MLTGFVQN--ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 464

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                 + V NA + MY+K G+I  A  +F  I  +D +SWNA+    A +   + A+ +
Sbjct: 465 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 524

Query: 553 FEEMKREGFAPDDISILGVLQAC 575
            + M+  G  PDD+S    + AC
Sbjct: 525 LKRMRLHGITPDDVSFSTAINAC 547



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 156/369 (42%), Gaps = 52/369 (14%)

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           + LHG  ++ G      +G+++V +Y K G    A        ER   + ++L+S + RS
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145

Query: 340 GHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           G  G  +  F       G   D   LA V+  CS    L  G Q+H   +K G+ S V  
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
             ALVD+YAK GD+ +AR + DG +C                                  
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIAC---------------------------------- 231

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
              PD + +S +++      C     +L +   K G A D +    +I+  A  G +D A
Sbjct: 232 ---PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHA 288

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             + K +     V+WNA++S +A  GL    L L+++M+  G  P   +   +L A    
Sbjct: 289 TALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA---- 344

Query: 579 GLSEGGICLFNEIEQ------IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
                 +  F E +Q      ++GL   +   + +++L  + G  S+A N+ + S   ++
Sbjct: 345 ---AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLS-CEKN 400

Query: 633 PLLWRTLVS 641
            ++W  +++
Sbjct: 401 IVMWNAMLT 409


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 217/681 (31%), Positives = 367/681 (53%), Gaps = 2/681 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +VK   G   +K+G+ VH  +   G + D F  ++LI LYA+   L  AQ LFD + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            + ++ W  ++ GY+ +GD  + + I  +M  SE K N  T + +L  C+       G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H  A+  G E +  V  +L++MY    C + A  +F      D+   N +I  Y + G 
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A H+F  ++S+  +P+  TF + +    E L ++  K++HG  ++  VV ++ + +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K    E A+++    S  + +  T +ISGYV +G   +A+  F   +   +   
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S   +++    +  + L LG +LHG  IK        +G+A++D+YAK G L  A  + +
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             + K    +N++++   +     E   + LF Q  + G   D V+ S  LS  A+   L
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGE--AINLFRQMGMEGTRYDCVSISGALSACANLPAL 478

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H   IK    +D+   ++LI MYAKCG+++ + ++F  + +R+ VSWN+++SAY
Sbjct: 479 HYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAY 538

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG  K  L LF EM R G  PD ++ LG++ AC ++G  + GI  ++ + + YG+   
Sbjct: 539 GNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPAR 598

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+AC+ D+ GRAGRL EA   INS PF     +W TL+    +  N + + +ASK L 
Sbjct: 599 MEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLF 658

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           DL+P ++G ++L++N+ AG G   +  KVR+ M +  + K  G SWIE+++  H FVA+ 
Sbjct: 659 DLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAAD 718

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
             HP + +IYS LD L  E+K
Sbjct: 719 GSHPLTAQIYSVLDSLLLELK 739



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 251/475 (52%), Gaps = 4/475 (0%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y +   L  A+ LF  + +     W  +I+G+   G +   L     M  +    +++T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
              +++AC  L+    G+ +H      G + +VFVG+SLI +Y  +G   +A+ +F  + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            KD    N M+  Y K G+S  A  +F+ +  S+ +PN  TF  V+SVC     ++ G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           LHG+AV  G+  +  V N ++ MY K    + A ++FD   + +L+SW  +ISGYV++G 
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
            G+A + F   +  GI  DS   A+ +   +   +L+   ++HG+ I+H  + DV L +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE-DVMVLFSQQRLAGM 460
           L+DIY K  D++ A+ +L   S   T     ++SG++    + E  +      Q+R   M
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER---M 357

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +P  VTFS +    A  A L  G+ LH   IKT       VG+A++ MYAKCG +D A +
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +F  I+++D + WN+M+++ + +G    A+ LF +M  EG   D +SI G L AC
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSAC 472


>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 226/676 (33%), Positives = 367/676 (54%), Gaps = 14/676 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGM--LVRSAITWTSL 130
           + G+A+HA+ LKSG+ +    AN+LIN Y+   R  L  A  +FD +    R   +W SL
Sbjct: 29  RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-SG 189
           +         +++      +  S    + H+ +    A +       G   HA A K   
Sbjct: 89  LNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             +NV+V TSL++MY   G   +A  VF G+  ++    + M+  Y     SE AF +F 
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208

Query: 250 HLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
            +L     E +++  T V+S     LG+  G+Q+HGL VK G++  +SV N++VTMY K 
Sbjct: 209 LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKA 268

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A  +F++  ERN I+W+A+I+GY ++G    A++ F +    G          V+
Sbjct: 269 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 328

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           +  S    L +G Q HG  +K G+   + + +ALVD+YAK G +  A+   +GF   Y  
Sbjct: 329 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAK---EGFDQLYEV 385

Query: 429 E---FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
           +   + A++SG ++    + E+ + L+++    G+ P   T +  L   A  A L  G+ 
Sbjct: 386 DIVLWTAMVSGHVQN--GEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQ 443

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           LH   +K G      VG+AL TMY+KCG+++    +F+ I DRD+++WN+++S ++ +G 
Sbjct: 444 LHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGC 503

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G GAL LFEEMK EG  PD+I+ + +L AC + GL + G   F+ + + YGL P L+H+A
Sbjct: 504 GNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYA 563

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           CMVD+L RAG L EA + I S        LWR ++   + + +      A +RL++L   
Sbjct: 564 CMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTG 623

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           D+ ++IL+SN+YA Q   ++  +VR  M    ++K+ GCSW+E++S++H FV   + HPE
Sbjct: 624 DSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPE 683

Query: 726 SEEIYSKLDLLNDEMK 741
           +E I ++L  L   MK
Sbjct: 684 AENINAQLRRLAKHMK 699



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 2/381 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L  +S+  G L +G+ +H  ++K G  +     N+L+ +YAK   +  A  +F+    R+
Sbjct: 227 LSAVSVPLG-LLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERN 285

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +ITW+++I GY  +G+ +S + +   M+ +     E T   +L A S L     G+Q H 
Sbjct: 286 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 345

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K GFE  ++V ++L+ MY   GC  +A+  F  L   D+     M+  + + GE E 
Sbjct: 346 LMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 405

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  ++  +      P+  T  + +  C     +E GKQLH   VK+G+     VG+A+ T
Sbjct: 406 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 465

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  E+   +F  I +R++I+W ++ISG+ ++G G  A++ F E    G   D+  
Sbjct: 466 MYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNIT 525

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
              ++  CS    ++ G +      K +G    +     +VDI ++ G LK A+  ++  
Sbjct: 526 FINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESI 585

Query: 423 SCKYTAEFNAILSGFMEKIAD 443
           +  +      I+ G    + D
Sbjct: 586 TIDHGTCLWRIVLGACRSLRD 606



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 6/81 (7%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS--IDGAFQIFKG 524
           F  LL   AS  C   G +LHA+++K+G A+   V N+LI  Y+      +  AF +F  
Sbjct: 17  FIELLRRRAS--CPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDD 74

Query: 525 I--SDRDIVSWNAMLSAYALH 543
           I  + RD+ SWN++L+  + H
Sbjct: 75  IPPAARDVTSWNSLLNPLSGH 95


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 208/668 (31%), Positives = 359/668 (53%), Gaps = 5/668 (0%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            GQ +HA  +  G   + F  ++LINLYAK      A+ +FD    ++ + W +++ G++ 
Sbjct: 344  GQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 403

Query: 137  DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            +   E  + +   M R   + +E T   IL AC+ L     G+Q+H   IK+  + ++FV
Sbjct: 404  NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463

Query: 197  GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              + + MY   G   +A+ +F  + YKD    N + +   +  E E A  +   +     
Sbjct: 464  ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523

Query: 257  EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
             P+D +F+  I+ C      E GKQ+H LA+K+G+    +VG++++ +Y KHG  E + +
Sbjct: 524  TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583

Query: 317  MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            +F  +   +++   ALI+G+V++ +  +AI  F + L  G+   S   ++++ GCS   N
Sbjct: 584  IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN 643

Query: 377  LELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAIL 434
              +G Q+H + +K G L  D  LG +L  IY K   L+ A  LL      K   E+ AI+
Sbjct: 644  SAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAII 703

Query: 435  SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
            SG+ +    D    +V F + R   +  D  TF+ +L   +       G+ +H    K+G
Sbjct: 704  SGYAQNGYGDHS--LVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSG 761

Query: 495  YAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLF 553
            + +     +ALI MY+KCG +  +F+ FK + ++ DI+ WN+M+  +A +G    ALLLF
Sbjct: 762  FGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLF 821

Query: 554  EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            ++M+     PD+++ LGVL AC +SGL   G   F  + ++YGL P L+H+AC +DLLGR
Sbjct: 822  QKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGR 881

Query: 614  AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
             G L EA   I+  PF    ++W T ++  ++  + +   +A+++L++LEP+ + +++L+
Sbjct: 882  GGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLL 941

Query: 674  SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
            S+++A  G   EA   R +M +  ++K  GCSWI + +K   F+   K HP++  IY  L
Sbjct: 942  SSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEML 1001

Query: 734  DLLNDEMK 741
              L   MK
Sbjct: 1002 GDLTGMMK 1009



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 273/539 (50%), Gaps = 11/539 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++      G  +   A+ + + K GS  D      +I+  A   RLD A  L   M 
Sbjct: 227 WSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMP 286

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
             S + W ++I G+   G   +VLG+  DM          T + +L A + ++  + G+Q
Sbjct: 287 TPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQ 346

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +HA A+  G + NVFVG+SLI++Y   GC  +A+NVF     K++   N M+  + +   
Sbjct: 347 MHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNEL 406

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  +F +++    + +++TF +++  C        GKQ+H + +K  +   + V NA
Sbjct: 407 PEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANA 466

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
            + MY K+G   +A+ +F  I  ++ ISW AL  G  ++    +A+         GI  D
Sbjct: 467 TLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPD 526

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               +T I+ CS     E G Q+H  AIK+G  S+  +G++L+D+Y+K GD++S+R +  
Sbjct: 527 DVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFA 586

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                     NA+++GF++   ++E++ + LF Q    G++P  VTFS +LS  +     
Sbjct: 587 QVDASSIVPINALIAGFVQN--NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNS 644

Query: 481 VRGRSLHAYSIKTGYAA-DVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLS 538
             G+ +H Y++K+G    D ++G +L  +Y K   ++ A ++   + D +++  W A++S
Sbjct: 645 AIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIIS 704

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            YA +G G  +L+ F  M+      D+ +   VL+AC         +  F + ++I+GL
Sbjct: 705 GYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKAC-------SDVTAFADGKEIHGL 756



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 222/503 (44%), Gaps = 46/503 (9%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           +A+H  +L+ GS       ++L+ LY K  R+  A         R++   +SL+  +   
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 138 GDYESVLG----IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           G    VLG    I C      ++F     +V+L ACS +    +G Q+H   +KSGF ++
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFG---LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VF   +L+ MY   G    A  VF G+A  D  C + MI  Y++ G  + A  +F  +  
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDK 252

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+  T   +IS                                        G  + 
Sbjct: 253 MGSAPDQVTLVTIIST-----------------------------------LASSGRLDH 277

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +   +   + ++W A+ISG+ +SG     +  + +    G+    S  A+++   + 
Sbjct: 278 ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAAN 337

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFNA 432
                 G Q+H  A+ HG  ++V +G++L+++YAK G    A+ + D  SC K    +NA
Sbjct: 338 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNA 396

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +L+GF++   +  E+ + +F       ++ D  TF  +L      +    G+ +H  +IK
Sbjct: 397 MLTGFVQN--ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                 + V NA + MY+K G+I  A  +F  I  +D +SWNA+    A +   + A+ +
Sbjct: 455 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 514

Query: 553 FEEMKREGFAPDDISILGVLQAC 575
            + M+  G  PDD+S    + AC
Sbjct: 515 LKRMRLHGITPDDVSFSTAINAC 537



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 156/369 (42%), Gaps = 52/369 (14%)

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           + LHG  ++ G      +G+++V +Y K G    A        ER   + ++L+S + RS
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 340 GHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           G  G  +  F       G   D   LA V+  CS    L  G Q+H   +K G+ S V  
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
             ALVD+YAK GD+ +AR + DG +C                                  
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIAC---------------------------------- 221

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
              PD + +S +++      C     +L +   K G A D +    +I+  A  G +D A
Sbjct: 222 ---PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHA 278

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             + K +     V+WNA++S +A  GL    L L+++M+  G  P   +   +L A    
Sbjct: 279 TALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA---- 334

Query: 579 GLSEGGICLFNEIEQ------IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
                 +  F E +Q      ++GL   +   + +++L  + G  S+A N+ + S   ++
Sbjct: 335 ---AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLS-CEKN 390

Query: 633 PLLWRTLVS 641
            ++W  +++
Sbjct: 391 IVMWNAMLT 399


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 208/668 (31%), Positives = 359/668 (53%), Gaps = 5/668 (0%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            GQ +HA  +  G   + F  ++LINLYAK      A+ +FD    ++ + W +++ G++ 
Sbjct: 344  GQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 403

Query: 137  DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            +   E  + +   M R   + +E T   IL AC+ L     G+Q+H   IK+  + ++FV
Sbjct: 404  NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463

Query: 197  GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              + + MY   G   +A+ +F  + YKD    N + +   +  E E A  +   +     
Sbjct: 464  ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523

Query: 257  EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
             P+D +F+  I+ C      E GKQ+H LA+K+G+    +VG++++ +Y KHG  E + +
Sbjct: 524  TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583

Query: 317  MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            +F  +   +++   ALI+G+V++ +  +AI  F + L  G+   S   ++++ GCS   N
Sbjct: 584  IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN 643

Query: 377  LELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAIL 434
              +G Q+H + +K G L  D  LG +L  IY K   L+ A  LL      K   E+ AI+
Sbjct: 644  SAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAII 703

Query: 435  SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
            SG+ +    D    +V F + R   +  D  TF+ +L   +       G+ +H    K+G
Sbjct: 704  SGYAQNGYGDHS--LVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSG 761

Query: 495  YAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLF 553
            + +     +ALI MY+KCG +  +F+ FK + ++ DI+ WN+M+  +A +G    ALLLF
Sbjct: 762  FGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLF 821

Query: 554  EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            ++M+     PD+++ LGVL AC +SGL   G   F  + ++YGL P L+H+AC +DLLGR
Sbjct: 822  QKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGR 881

Query: 614  AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
             G L EA   I+  PF    ++W T ++  ++  + +   +A+++L++LEP+ + +++L+
Sbjct: 882  GGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLL 941

Query: 674  SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
            S+++A  G   EA   R +M +  ++K  GCSWI + +K   F+   K HP++  IY  L
Sbjct: 942  SSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEML 1001

Query: 734  DLLNDEMK 741
              L   MK
Sbjct: 1002 GDLTGMMK 1009



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 273/539 (50%), Gaps = 11/539 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++      G  +   A+ + + K GS  D      +I+  A   RLD A  L   M 
Sbjct: 227 WSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMP 286

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
             S + W ++I G+   G   +VLG+  DM          T + +L A + ++  + G+Q
Sbjct: 287 TPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQ 346

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +HA A+  G + NVFVG+SLI++Y   GC  +A+NVF     K++   N M+  + +   
Sbjct: 347 MHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNEL 406

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  +F +++    + +++TF +++  C        GKQ+H + +K  +   + V NA
Sbjct: 407 PEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANA 466

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
            + MY K+G   +A+ +F  I  ++ ISW AL  G  ++    +A+         GI  D
Sbjct: 467 TLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPD 526

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               +T I+ CS     E G Q+H  AIK+G  S+  +G++L+D+Y+K GD++S+R +  
Sbjct: 527 DVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFA 586

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                     NA+++GF++   ++E++ + LF Q    G++P  VTFS +LS  +     
Sbjct: 587 QVDASSIVPINALIAGFVQN--NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNS 644

Query: 481 VRGRSLHAYSIKTGYAA-DVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLS 538
             G+ +H Y++K+G    D ++G +L  +Y K   ++ A ++   + D +++  W A++S
Sbjct: 645 AIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIIS 704

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            YA +G G  +L+ F  M+      D+ +   VL+AC         +  F + ++I+GL
Sbjct: 705 GYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKAC-------SDVTAFADGKEIHGL 756



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 222/503 (44%), Gaps = 46/503 (9%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           +A+H  +L+ GS       ++L+ LY K  R+  A         R++   +SL+  +   
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 138 GDYESVLG----IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           G    VLG    I C      ++F     +V+L ACS +    +G Q+H   +KSGF ++
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFG---LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VF   +L+ MY   G    A  VF G+A  D  C + MI  Y++ G  + A  +F  +  
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDK 252

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+  T   +IS                                        G  + 
Sbjct: 253 MGSAPDQVTLVTIIST-----------------------------------LASSGRLDH 277

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +   +   + ++W A+ISG+ +SG     +  + +    G+    S  A+++   + 
Sbjct: 278 ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAAN 337

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFNA 432
                 G Q+H  A+ HG  ++V +G++L+++YAK G    A+ + D  SC K    +NA
Sbjct: 338 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNA 396

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +L+GF++   +  E+ + +F       ++ D  TF  +L      +    G+ +H  +IK
Sbjct: 397 MLTGFVQN--ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                 + V NA + MY+K G+I  A  +F  I  +D +SWNA+    A +   + A+ +
Sbjct: 455 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 514

Query: 553 FEEMKREGFAPDDISILGVLQAC 575
            + M+  G  PDD+S    + AC
Sbjct: 515 LKRMRLHGITPDDVSFSTAINAC 537



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 156/369 (42%), Gaps = 52/369 (14%)

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           + LHG  ++ G      +G+++V +Y K G    A        ER   + ++L+S + RS
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 340 GHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           G  G  +  F       G   D   LA V+  CS    L  G Q+H   +K G+ S V  
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
             ALVD+YAK GD+ +AR + DG +C                                  
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIAC---------------------------------- 221

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
              PD + +S +++      C     +L +   K G A D +    +I+  A  G +D A
Sbjct: 222 ---PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHA 278

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             + K +     V+WNA++S +A  GL    L L+++M+  G  P   +   +L A    
Sbjct: 279 TALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA---- 334

Query: 579 GLSEGGICLFNEIEQ------IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
                 +  F E +Q      ++GL   +   + +++L  + G  S+A N+ + S   ++
Sbjct: 335 ---AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLS-CEKN 390

Query: 633 PLLWRTLVS 641
            ++W  +++
Sbjct: 391 IVMWNAMLT 399


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 207/672 (30%), Positives = 369/672 (54%), Gaps = 10/672 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS-AITWTSLI 131
           D + G  VH   +K G  +  F AN+++ +Y K N L+ A++LFD M  +   ++W S+I
Sbjct: 231 DRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMI 290

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ---IHAFAIKS 188
             Y  +G     L +  +M ++    N +T    L+AC   ED  F +Q   IHA  +KS
Sbjct: 291 SAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC---EDSSFIKQGMFIHATVLKS 347

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            +  NVFV  +LI+MY   G   EA N+F  +   D    N M+  + + G    A   +
Sbjct: 348 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +  +  +P+     ++I+    +     G Q+H  A+K G+  ++ VGN++V MY K 
Sbjct: 408 HEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 467

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              +  + +FD + +++++SWT +I+G+ ++G   +A+  F E    GI  D   +++++
Sbjct: 468 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 527

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS    +    ++H + I+ G LSD+ L   +VD+Y + G++  A  + +    K   
Sbjct: 528 LACSGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVV 586

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            + +++S ++     +E   + LF   +  G+EPD ++   +LS +AS + L +G+ +H 
Sbjct: 587 SWTSMISCYVHNGLANE--ALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHG 644

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           + I+ G+  +  + + L+ MYA+CG+++ +  +F  I ++D+V W +M++AY +HG G+ 
Sbjct: 645 FLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRA 704

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A+ LF  M+ E  APD I+ + VL AC +SGL   G      ++  Y L P  EH+ C+V
Sbjct: 705 AIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLV 764

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGRA  L EA   +       +  +W  L+   ++ +N +   +A+++LL+++P++ G
Sbjct: 765 DLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPG 824

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++LVSN+YA +    +  +VR  M    L K  GCSWIE+ +K+H F+A  K HP+S E
Sbjct: 825 NYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYE 884

Query: 729 IYSKLDLLNDEM 740
           IYSKL  + +++
Sbjct: 885 IYSKLSQITEKL 896



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 194/704 (27%), Positives = 347/704 (49%), Gaps = 33/704 (4%)

Query: 11  QPPFKSQQSLPPLK-KKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQ------ 63
            P  K     PPLK  K P+         ++    S++    S   L  N  P       
Sbjct: 56  HPVLKKIHQNPPLKISKFPLKPVETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDE 115

Query: 64  ----LVKISIGSGDLKLGQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQKLFDG 118
               ++++      L  GQ VHA ++ S +  N  F +  L+ +Y K   L  A+KLFDG
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  ++  TW ++I  Y+ +G+    L +  +M  S    +  T   IL+AC LL+DR  G
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNK 237
            ++H  AIK G+ + VFV  S++ MY        A  +F  +  K DV   N MI  Y+ 
Sbjct: 236 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 295

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G+S  A  +F  +  +   PN YTF   +  C ++  +++G  +H   +K      + V
Sbjct: 296 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA++ MY + G   EA  +F  + + + ISW +++SG+V++G   +A+  + E  D G 
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   + ++I   +   N   G+Q+H +A+K+G  SD+++G +LVD+YAK   +K    
Sbjct: 416 KPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 475

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +  I++G  +         + LF + +L G++ D +  S +L   +  
Sbjct: 476 IFDKMPDKDVVSWTTIIAGHAQN--GSHSRALELFREVQLEGIDLDVMMISSILLACSGL 533

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +   + +H+Y I+ G  +D+++ N ++ +Y +CG++D A ++F+ I  +D+VSW +M+
Sbjct: 534 KLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMI 592

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG- 596
           S Y  +GL   AL LF  MK  G  PD IS++ +L A       + G       ++I+G 
Sbjct: 593 SCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKG-------KEIHGF 645

Query: 597 -LRP--ILEH--FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
            +R   +LE    + +VD+  R G L ++ N+ N    ++  +LW ++++   +    + 
Sbjct: 646 LIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR-NKDLVLWTSMINAYGMHGCGRA 704

Query: 652 SILASKRLLD--LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           +I   +R+ D  + P D  +F+ V    +  G+++E  +   +M
Sbjct: 705 AIDLFRRMEDESIAP-DHIAFVAVLYACSHSGLMNEGRRFLESM 747


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 207/672 (30%), Positives = 369/672 (54%), Gaps = 10/672 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS-AITWTSLI 131
           D + G  VH   +K G  +  F AN+++ +Y K N L+ A++LFD M  +   ++W S+I
Sbjct: 195 DRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMI 254

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ---IHAFAIKS 188
             Y  +G     L +  +M ++    N +T    L+AC   ED  F +Q   IHA  +KS
Sbjct: 255 SAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC---EDSSFIKQGMFIHATVLKS 311

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            +  NVFV  +LI+MY   G   EA N+F  +   D    N M+  + + G    A   +
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +  +  +P+     ++I+    +     G Q+H  A+K G+  ++ VGN++V MY K 
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 431

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              +  + +FD + +++++SWT +I+G+ ++G   +A+  F E    GI  D   +++++
Sbjct: 432 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 491

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS    +    ++H + I+ G LSD+ L   +VD+Y + G++  A  + +    K   
Sbjct: 492 LACSGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVV 550

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            + +++S ++     +E   + LF   +  G+EPD ++   +LS +AS + L +G+ +H 
Sbjct: 551 SWTSMISCYVHNGLANE--ALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHG 608

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           + I+ G+  +  + + L+ MYA+CG+++ +  +F  I ++D+V W +M++AY +HG G+ 
Sbjct: 609 FLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRA 668

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A+ LF  M+ E  APD I+ + VL AC +SGL   G      ++  Y L P  EH+AC+V
Sbjct: 669 AIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLV 728

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGRA  L EA   +       +  +W  L+   ++ +N +   +A+++LL+++P++ G
Sbjct: 729 DLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPG 788

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++LVSN+Y+ +    +   VR  M    L K  GCSWIE+ +K+H F+A  K HP+S E
Sbjct: 789 NYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYE 848

Query: 729 IYSKLDLLNDEM 740
           IYSKL  + +++
Sbjct: 849 IYSKLSQITEKL 860



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 194/704 (27%), Positives = 348/704 (49%), Gaps = 33/704 (4%)

Query: 11  QPPFKSQQSLPPLK-KKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQ------ 63
            P  K     PPLK  K P+         ++    S++    S   L  N  P       
Sbjct: 20  HPVLKKIHQNPPLKISKFPLKPVETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDE 79

Query: 64  ----LVKISIGSGDLKLGQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQKLFDG 118
               ++++      L  GQ VHA ++ S +  N  F +  L+ +Y K   L  A+KLFDG
Sbjct: 80  AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  ++  TW ++I  Y+ +G+    L +  +M  S    +  T   IL+AC LL+DR +G
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNK 237
            ++H  AIK G+ + VFV  S++ MY        A  +F  +  K DV   N MI  Y+ 
Sbjct: 200 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 259

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G+S  A  +F  +  +   PN YTF   +  C ++  +++G  +H   +K      + V
Sbjct: 260 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA++ MY + G   EA  +F  + + + ISW +++SG+V++G   +A+  + E  D G 
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   + ++I   +   N   G+Q+H +A+K+G  SD+++G +LVD+YAK   +K    
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 439

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +  I++G  +         + LF + +L G++ D +  S +L   +  
Sbjct: 440 IFDKMPDKDVVSWTTIIAGHAQN--GSHSRALELFREVQLEGIDLDVMMISSILLACSGL 497

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             +   + +H+Y I+ G  +D+++ N ++ +Y +CG++D A ++F+ I  +D+VSW +M+
Sbjct: 498 KLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMI 556

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG- 596
           S Y  +GL   AL LF  MK  G  PD IS++ +L A       + G       ++I+G 
Sbjct: 557 SCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKG-------KEIHGF 609

Query: 597 -LRP--ILEH--FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
            +R   +LE    + +VD+  R G L ++ N+ N    ++  +LW ++++   +    + 
Sbjct: 610 LIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR-NKDLVLWTSMINAYGMHGCGRA 668

Query: 652 SILASKRLLD--LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           +I   +R+ D  + P D  +F+ V    +  G+++E  +   +M
Sbjct: 669 AIDLFRRMEDESIAP-DHIAFVAVLYACSHSGLMNEGRRFLESM 711


>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 225/676 (33%), Positives = 368/676 (54%), Gaps = 14/676 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGM--LVRSAITWTSL 130
           + G+A+HA+ LKSG+ +    AN+LIN Y+   R  L  A  +FD +    R   +W SL
Sbjct: 29  RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-SG 189
           +         +++      +  S    + H+ +    A +       G   HA A K   
Sbjct: 89  LNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             +NV+V TSL++MY   G   +A  +F G+  ++    + M+  Y     SE AF +F 
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208

Query: 250 HLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
            +L     E +++  T V+S     LG+  G+Q+HGL VK G++  +SV N++VTMY K 
Sbjct: 209 LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKA 268

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A  +F++  ERN I+W+A+I+GY ++G    A++ F +    G          V+
Sbjct: 269 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 328

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           +  S    L +G Q HG  +K G+   + + +ALVD+YAK G +  A+   +GF   Y  
Sbjct: 329 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAK---EGFDQLYEV 385

Query: 429 E---FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
           +   + A++SG ++    + E+ + L+++    G+ P   T +  L   A  A L  G+ 
Sbjct: 386 DIVLWTAMVSGHVQN--GEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQ 443

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           LH   +K G      VG+AL TMY+KCG+++    +F+ I DRD+++WN+++S ++ +G 
Sbjct: 444 LHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGC 503

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G GAL LFEEMK EG  PD+I+ + +L AC + GL + G   F+ + + YGL P L+H+A
Sbjct: 504 GNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYA 563

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           CMVD+L RAG L EA + I S        LWR ++   + + +      A +RL++L  +
Sbjct: 564 CMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTR 623

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           D+ ++IL+SN+YA Q   ++  +VR  M    ++K+ GCSW+E++S++H FV   + HPE
Sbjct: 624 DSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPE 683

Query: 726 SEEIYSKLDLLNDEMK 741
           +E I ++L  L   MK
Sbjct: 684 AENINAQLRRLAKHMK 699



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 2/381 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L  +S+  G L +G+ +H  ++K G  +     N+L+ +YAK   +  A  +F+    R+
Sbjct: 227 LSAVSVPLG-LLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERN 285

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +ITW+++I GY  +G+ +S + +   M+ +     E T   +L A S L     G+Q H 
Sbjct: 286 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 345

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K GFE  ++V ++L+ MY   GC  +A+  F  L   D+     M+  + + GE E 
Sbjct: 346 LMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 405

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  ++  +      P+  T  + +  C     +E GKQLH   VK+G+     VG+A+ T
Sbjct: 406 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 465

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  E+   +F  I +R++I+W ++ISG+ ++G G  A++ F E    G   D+  
Sbjct: 466 MYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNIT 525

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
              ++  CS    ++ G +      K +G    +     +VDI ++ G LK A+  ++  
Sbjct: 526 FINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESI 585

Query: 423 SCKYTAEFNAILSGFMEKIAD 443
           +  +      I+ G    + D
Sbjct: 586 TIDHGTCLWRIVLGACRSLRD 606



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 6/81 (7%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS--IDGAFQIFKG 524
           F  LL   AS  C   G +LHA+++K+G A+   V N+LI  Y+      +  AF +F  
Sbjct: 17  FIELLRRRAS--CPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDD 74

Query: 525 I--SDRDIVSWNAMLSAYALH 543
           I  + RD+ SWN++L+  + H
Sbjct: 75  IPPAARDVASWNSLLNPLSRH 95


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 219/689 (31%), Positives = 368/689 (53%), Gaps = 23/689 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+LG  VH   ++ G ++D +  N LI++Y++F  LD A+ +F+ M  R +++W SLI 
Sbjct: 136 DLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLIS 195

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNE-------HTCSVILEACSLLEDRIFGEQIHAFA 185
           GY  +G +E  L    DMY    KF          T S +L AC  L     G  +H   
Sbjct: 196 GYCSNGFWEDAL----DMY---HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
            K G   +V +G  L+SMYF     REA  VF  +A KD    N MI  Y + G  E + 
Sbjct: 249 EKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASV 308

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +F+ ++   F P+  + T+ I  C ++  ++ GK +H   +  G   +    N ++ MY
Sbjct: 309 KLFMDMIDG-FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMY 367

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G    A+ +FD    ++ ++W +LI+GY +SG+  + +  F + + +    DS    
Sbjct: 368 AKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFV 426

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            ++   S  +++  G  +H   IK G+ +++ +G +L+D+YAK G++     +    S  
Sbjct: 427 LLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH 486

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N +++  +    DD      + ++ R  G+ PD  T   +L + +  A   +G+ 
Sbjct: 487 DIISWNTVIASSVH--FDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKE 544

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +H Y  K+G+ ++V +GNALI MY+KCGS++   ++FK + ++D+V+W A++SA+ ++G 
Sbjct: 545 IHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGE 604

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           GK AL  F++M+  G  PD ++ +  + AC +SG+ + G+  F+ ++  Y L P +EH+A
Sbjct: 605 GKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYA 664

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           C+VDLL R+G L++A   I S P      LW  L+S  +   N+  +   SK++L+L   
Sbjct: 665 CVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSD 724

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           D G ++LVSN+YA  G  D+   VR +M    L KE G SWIEI  +++ F    K    
Sbjct: 725 DTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDK---- 780

Query: 726 SEEIYSKL-DLLNDEMKLKVKDSSAFELQ 753
           S E Y K+ DLL   ++L  K+    +LQ
Sbjct: 781 SFEQYDKVKDLLEYLVRLMAKEGYVADLQ 809



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 258/500 (51%), Gaps = 7/500 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-LVRSAITWTSLIKGYLD 136
           + VH+ ++ SG       +  LI+ YA+      +  +F  +    +   W S+I+    
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G +   LG   +M   + + +  T   ++ +C+ + D   G  +H  A++ GFE+++++
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G +LI MY        A  VF  ++ +D    N +I  Y   G  E A  ++     +  
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ +T ++V+  C   + V+EG  +HG+  K G+  ++ +GN +++MY K     EA R
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  ++ ++ ++W  +I GY + G    ++  F++ +D G   D   + + I  C    +
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGD 337

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L++G  +H + I  G+  D      L+D+YAK GDL +A+ + D   CK +  +N++++G
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397

Query: 437 FMEKIADDEE-DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           + +     E  +   +   +R    +PD VTF  LLS+ +  A + +GR +H   IK G+
Sbjct: 398 YTQSGYYKEGLESFKMMKMER----KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF 453

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            A++I+GN+L+ +YAKCG +D   ++F  +S  DI+SWN ++++            +  E
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINE 513

Query: 556 MKREGFAPDDISILGVLQAC 575
           M+ EG  PD+ ++LG+L  C
Sbjct: 514 MRTEGLMPDEATVLGILPMC 533



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 197/403 (48%), Gaps = 7/403 (1%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAG 239
           +H+  I SG   +V     LIS Y        + +VFR ++   +V   N +I      G
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
               A   +  +     +P+ +TF +VI+ C   L +E G  +H  A++ G   ++ +GN
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ MY +    + A  +F+ +S R+ +SW +LISGY  +G    A++ + +F   G+  
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   +++V+  C     ++ G+ +HG   K G   DV +G  L+ +Y K   L+ AR + 
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
              + K +  +N ++ G+ + +   E  V +      + G  PD ++ +  +        
Sbjct: 281 SKMAVKDSVTWNTMICGYAQ-LGRHEASVKLFMDM--IDGFVPDMLSITSTIRACGQSGD 337

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  G+ +H Y I +G+  D +  N LI MYAKCG +  A ++F     +D V+WN++++ 
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           Y   G  K  L  F+ MK E   PD ++   VL   I+S L++
Sbjct: 398 YTQSGYYKEGLESFKMMKMER-KPDSVTF--VLLLSIFSQLAD 437



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 181/369 (49%), Gaps = 5/369 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SGDL++G+ VH +L+ SG + DT   N LI++YAK   L  AQ++FD    + ++TW SL
Sbjct: 335 SGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSL 394

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY   G Y+  L  +  M + E K +  T  ++L   S L D   G  IH   IK GF
Sbjct: 395 INGYTQSGYYKEGLE-SFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF 453

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E  + +G SL+ +Y   G   +   VF  ++  D+   N +I       +  + F +   
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINE 513

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + +    P++ T   ++ +C       +GK++HG   K G    + +GNA++ MY K G 
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGS 573

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E   ++F  + E+++++WTALIS +   G G KA+  F +    G+  DS      I  
Sbjct: 574 LENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFA 633

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           CS    ++ GL+     +K  Y  + R+     +VD+ A+ G L  A   +     K  A
Sbjct: 634 CSHSGMVKEGLRFFD-RMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDA 692

Query: 429 E-FNAILSG 436
             + A+LS 
Sbjct: 693 SLWGALLSA 701



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 3/175 (1%)

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS- 526
           S LL   +S     + R++H+  I +G +  VI    LI+ YA+      +  +F+ IS 
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
             ++  WN+++ A   +GL   AL  + EM+ +   PD  +   V+ +C      E G C
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELG-C 141

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           + +E     G    L     ++D+  R   L  A  +       +S + W +L+S
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDS-VSWNSLIS 195


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 210/689 (30%), Positives = 367/689 (53%), Gaps = 12/689 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +VK   G  ++++G AVH  ++K+    D F +N L++ Y     +  A ++F  M 
Sbjct: 187 FPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMP 246

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF----NEHTCSVILEACSLLEDRI 176
            R+ ++W S+I+ + D+G  E    +   M   +++     +  T + +L  C+   +  
Sbjct: 247 ERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIG 306

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+ +H  A+K   +  V V  +L+ MY   GC  +A+ +F+    K+V   N M+  ++
Sbjct: 307 VGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFS 366

Query: 237 KAGESEMAFHVFVHLLSS--DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
            AG+    F +   +L+   D   ++ T  N + VC+E   +   K+LH  ++K   V  
Sbjct: 367 AAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHN 426

Query: 295 IS-VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
              V NA V  Y K G    A R+F +I  + + SW ALI GY +S     +++ + +  
Sbjct: 427 NELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMK 486

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
             G+  D   + +++  CS   +L+LG ++HG  I++    D  +  +L+ +Y   G+L 
Sbjct: 487 SSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELS 546

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           +A +L D    K    +N +++G+++      E  + LF Q  L G++P  ++   +   
Sbjct: 547 TAHVLFDAMEDKTLVSWNTMVNGYLQN--GFPERALSLFRQMVLYGVQPCEISMMSVFGA 604

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +    L  GR  H Y++K     +  +  ++I MYAK GS+  +F++F G+ +R + SW
Sbjct: 605 CSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASW 664

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           NAM+  Y +HG  K A+ LFEEM+R G  PD+++ LGVL AC +SGL   G+   ++++ 
Sbjct: 665 NAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKT 724

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP--LLWRTLVSVSKLMANSKF 651
           ++G+ P L+H+AC++D+L RAG+L EA+  I +   SE P   +W  L+S  ++  N + 
Sbjct: 725 LFGMNPTLKHYACVIDMLVRAGKLDEALK-IATEEMSEEPGVGIWNFLLSSCRIHKNLEM 783

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
               + +L   EP+   +++L+SN+YAG G  DE  KVR  M ++ L K+AGCSWIE++ 
Sbjct: 784 GEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNG 843

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           K+  FVA        EEI S   +L  E+
Sbjct: 844 KVFSFVAGESSLDGFEEIKSLWSVLEREI 872



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 273/570 (47%), Gaps = 28/570 (4%)

Query: 73  DLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           D++LG+ +H  + +S    ND      +I +Y+     D ++ +FD +  ++   W ++I
Sbjct: 96  DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
             Y  +  Y +VL +   M        ++ T   +++AC+ + +   G  +H   +K+  
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             +VFV  +L+S Y  +G   +A  VF+ +  +++   N MI  ++  G SE  F +   
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275

Query: 251 LLSSD----FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           ++  D    F P+  T   V+ VC  +  +  GK +HGLA+K  + +E+ V NA++ MY 
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYS 335

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG--ICCDSSCL 364
           K G   +A+ +F   + +N++SW  ++ G+  +G   K  +   + L  G  +  D   +
Sbjct: 336 KCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTI 395

Query: 365 ATVIDGC---SVCSNLELGLQLHGFAIKHGYLSDVRL-GTALVDIYAKGGDLKSARMLLD 420
              +  C   SV  NL+   +LH +++K  ++ +  L   A V  YAK G L  A  +  
Sbjct: 396 LNAVPVCFEESVLPNLK---ELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFC 452

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               K    +NA++ G+ +  + D    +  + Q + +G+ PD  T   LLS  +    L
Sbjct: 453 SIRSKTVNSWNALIGGYSQ--SSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSL 510

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H   I+     D  V  +L+++Y  CG +  A  +F  + D+ +VSWN M++ Y
Sbjct: 511 KLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGY 570

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIEQIYGLRP 599
             +G  + AL LF +M   G  P +IS++ V  AC +   L  G           Y L+ 
Sbjct: 571 LQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLG------REAHGYALKC 624

Query: 600 ILEH---FAC-MVDLLGRAGRLSEAMNLIN 625
           +LE     AC ++D+  + G + E+  + N
Sbjct: 625 LLEDNAFIACSVIDMYAKNGSVMESFKVFN 654



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 211/419 (50%), Gaps = 13/419 (3%)

Query: 167 EACSLLEDRIFGEQIHAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           +A    +D   G +IH    +S    N+  + T +I+MY   G   ++ +VF  L  K++
Sbjct: 89  QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
              N +I  Y++         +FV +++ S   P+++TF  V+  C     V+ G  +HG
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
           L VK  +V ++ V NA+V+ YG +G   +A R+F  + ERNL+SW ++I  +  +G   +
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268

Query: 345 A---INGFLEFLD-LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
               +   +E  D +    D + LATV+  C+    + +G  +HG A+K     +V +  
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNN 328

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG- 459
           AL+D+Y+K G +  A+++    + K    +N ++ GF    A D      L  +Q LAG 
Sbjct: 329 ALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGF--SAAGDIHKTFDLL-RQMLAGG 385

Query: 460 --MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA-ADVIVGNALITMYAKCGSID 516
             +  D VT    + +   ++ L   + LH YS+K  +   + +V NA +  YAKCGS+ 
Sbjct: 386 GDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLS 445

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            A ++F  I  + + SWNA++  Y+     + +L  + +MK  G  PD  ++  +L AC
Sbjct: 446 YAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC 504


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 217/681 (31%), Positives = 367/681 (53%), Gaps = 2/681 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +VK   G   +K+G+ VH  +   G + D F  ++LI LYA+   L  AQ LFD + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            + ++ W  ++ GY+ +GD  + + I  +M  SE K N  T + +L  C+       G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H  A+  G E +  V  +L++MY    C + A  +F  L   D+   N +I  Y + G 
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A H+F  ++S+  +P+  TF + +    E L ++  K++HG  ++  VV ++ + +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K    E A++     S  + +  T +ISGYV +G   +A+  F   +   +   
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S   +++    +  + L LG +LHG  IK        +G+A++D+YAK G L  A  + +
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             + K    +N++++   +     E   + LF Q  + G   D V+ S  LS  A+   L
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGE--AINLFRQMGMEGTRYDCVSISGALSACANLPAL 478

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H   IK    +D+   ++LI MYAKCG+++ + ++F  + +++ VSWN+++SAY
Sbjct: 479 HYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAY 538

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG  K  L LF EM R G  PD ++ LG++ AC ++G  + GI  ++ + + YG+   
Sbjct: 539 GNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPAR 598

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+AC+ D+ GRAGRL EA   INS PF     +W TL+    +  N + + +ASK L 
Sbjct: 599 MEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLF 658

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           DL+P ++G ++L++N+ AG G   +  KVR+ M +  + K  G SWIE+++  H FVA+ 
Sbjct: 659 DLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAAD 718

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
             HP + +IYS LD L  E+K
Sbjct: 719 GSHPLTAQIYSVLDSLLLELK 739



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 251/475 (52%), Gaps = 4/475 (0%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y +   L  A+ LF  + +     W  +I+G+   G +   L     M  +    +++T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
              +++AC  L+    G+ +H      G + +VFVG+SLI +Y  +G   +A+ +F  + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            KD    N M+  Y K G+S  A  +F+ +  S+ +PN  TF  V+SVC     ++ G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           LHG+AV  G+  +  V N ++ MY K    + A ++FD + + +L+SW  +ISGYV++G 
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
            G+A + F   +  GI  DS   A+ +   +   +L+   ++HG+ I+H  + DV L +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE-DVMVLFSQQRLAGM 460
           L+DIY K  D++ A+  L   S   T     ++SG++    + E  +      Q+R   M
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER---M 357

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +P  VTFS +    A  A L  G+ LH   IKT       VG+A++ MYAKCG +D A +
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +F  I+++D + WN+M+++ + +G    A+ LF +M  EG   D +SI G L AC
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSAC 472


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 218/682 (31%), Positives = 372/682 (54%), Gaps = 12/682 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ +  GS +  +G+ VH   +K G  +     N+L+++Y K   +   +++FD M  R 
Sbjct: 108 VLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRD 167

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W SL+ GY  +   + V  + C M     + + +T S ++ A +       G QIHA
Sbjct: 168 VVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHA 227

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K GFE    V  SLISM   SG  R+A  VF  +  KD    N MI  +   G+   
Sbjct: 228 LVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLE 287

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           AF  F ++  +  +P   TF +VI  C   + LG+   + LH   +K G+    +V  A+
Sbjct: 288 AFETFNNMQLAGAKPTHATFASVIKSCASLKELGLV--RVLHCKTLKSGLSTNQNVLTAL 345

Query: 302 VTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +    K    ++A  +F  +   ++++SWTA+ISGY+++G   +A+N F      G+  +
Sbjct: 346 MVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPN 405

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               +T++       +     ++H   IK  Y     +GTAL+D + K G++  A  + +
Sbjct: 406 HFTYSTIL----TVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFE 461

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQAC 479
               K    ++A+L+G+ +  A + E+   +F Q    G++P+  TF  ++ + +A  A 
Sbjct: 462 LIETKDVIAWSAMLAGYAQ--AGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTAS 519

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           + +G+  HAY+IK      + V ++L+T+YAK G+I+ A +IFK   +RD+VSWN+M+S 
Sbjct: 520 VEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISG 579

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           YA HG  K AL +FEEM++     D I+ +GV+ AC ++GL   G   FN +   + + P
Sbjct: 580 YAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINP 639

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            +EH++CM+DL  RAG L +AM++IN  PF  +  +WR +++ S++  N +   LA++++
Sbjct: 640 TMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKI 699

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           + LEP+ + +++L+SN+YA  G   E   VR  M+  R+ KE G SWIE+ +K + F+A 
Sbjct: 700 ISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAG 759

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
              HP S+ IYSKL  LN  ++
Sbjct: 760 DLSHPLSDHIYSKLSELNTRLR 781



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 230/465 (49%), Gaps = 7/465 (1%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           AQ+LFD   +R       L+  Y      +  L +   +YRS    + +T S +L  C+ 
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
             +   GEQ+H   +K G  +++ VG SL+ MY  +G  R+   VF  +  +DV   N +
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           +  Y+    ++  + +F  +    + P+ YT + VI+       V  G Q+H L VK G 
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
             E  V N++++M  K GM  +A  +FD +  ++ +SW ++I+G+V +G   +A   F  
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
               G     +  A+VI  C+    L L   LH   +K G  ++  + TAL+    K  +
Sbjct: 295 MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKE 354

Query: 412 LKSARMLLD-GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
           +  A  L       +    + A++SG+++    D +  + LFS  R  G++P+  T+S +
Sbjct: 355 IDDAFSLFSLMHGVQSVVSWTAMISGYLQN--GDTDQAVNLFSLMRREGVKPNHFTYSTI 412

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           L++  +    V    +HA  IKT Y     VG AL+  + K G+I  A ++F+ I  +D+
Sbjct: 413 LTVQHA----VFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDV 468

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           ++W+AML+ YA  G  + A  +F ++ REG  P++ +   ++ AC
Sbjct: 469 IAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINAC 513



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 194/363 (53%), Gaps = 3/363 (0%)

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           R A+ +F     +D++  N ++  Y++  +++ A H+FV L  S   P+ YT + V+SVC
Sbjct: 53  RFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVC 112

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
             +     G+Q+H   VK G+V  +SVGN++V MY K G   +  R+FD + +R+++SW 
Sbjct: 113 AGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWN 172

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           +L++GY  +    +    F      G   D   ++TVI   +    + +G+Q+H   +K 
Sbjct: 173 SLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKL 232

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G+ ++  +  +L+ + +K G L+ AR++ D    K +  +N++++G +  I   + +   
Sbjct: 233 GFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHV--INGQDLEAFE 290

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
            F+  +LAG +P   TF+ ++   AS   L   R LH  ++K+G + +  V  AL+    
Sbjct: 291 TFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALT 350

Query: 511 KCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           KC  ID AF +F  +   + +VSW AM+S Y  +G    A+ LF  M+REG  P+  +  
Sbjct: 351 KCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYS 410

Query: 570 GVL 572
            +L
Sbjct: 411 TIL 413


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 219/689 (31%), Positives = 368/689 (53%), Gaps = 23/689 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+LG  VH   ++ G ++D +  N LI++Y++F  LD A+ +F+ M  R +++W SLI 
Sbjct: 136 DLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLIS 195

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNE-------HTCSVILEACSLLEDRIFGEQIHAFA 185
           GY  +G +E  L    DMY    KF          T S +L AC  L     G  +H   
Sbjct: 196 GYCSNGFWEDAL----DMY---HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
            K G   +V +G  L+SMYF     REA  VF  +A KD    N MI  Y + G  E + 
Sbjct: 249 EKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASV 308

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +F+ ++   F P+  + T+ I  C ++  ++ GK +H   +  G   +    N ++ MY
Sbjct: 309 KLFMDMIDG-FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMY 367

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G    A+ +FD    ++ ++W +LI+GY +SG+  + +  F + + +    DS    
Sbjct: 368 AKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFV 426

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            ++   S  +++  G  +H   IK G+ +++ +G +L+D+YAK G++     +    S  
Sbjct: 427 LLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH 486

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N +++  +    DD      + ++ R  G+ PD  T   +L + +  A   +G+ 
Sbjct: 487 DIISWNTVIASSVH--FDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKE 544

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +H Y  K+G+ ++V +GNALI MY+KCGS++   ++FK + ++D+V+W A++SA+ ++G 
Sbjct: 545 IHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGE 604

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           GK AL  F++M+  G  PD ++ +  + AC +SG+ + G+  F+ ++  Y L P +EH+A
Sbjct: 605 GKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYA 664

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           C+VDLL R+G L++A   I S P      LW  L+S  +   N+  +   SK++L+L   
Sbjct: 665 CVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSD 724

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           D G ++LVSN+YA  G  D+   VR +M    L KE G SWIEI  +++ F    K    
Sbjct: 725 DTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDK---- 780

Query: 726 SEEIYSKL-DLLNDEMKLKVKDSSAFELQ 753
           S E Y K+ DLL   ++L  K+    +LQ
Sbjct: 781 SFEQYDKVKDLLEYLVRLMAKEGYVADLQ 809



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 258/500 (51%), Gaps = 7/500 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-LVRSAITWTSLIKGYLD 136
           + VH+ ++ SG       +  LI+ YA+      +  +F  +    +   W S+I+    
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G +   LG   +M   + + +  T   ++ +C+ + D   G  +H  A++ GFE+++++
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G +LI MY        A  VF  ++ +D    N +I  Y   G  E A  ++     +  
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ +T ++V+  C   + V+EG  +HG+  K G+  ++ +GN +++MY K     EA R
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  ++ ++ ++W  +I GY + G    ++  F++ +D G   D   + + I  C    +
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGD 337

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L++G  +H + I  G+  D      L+D+YAK GDL +A+ + D   CK +  +N++++G
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397

Query: 437 FMEKIADDEE-DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           + +     E  +   +   +R    +PD VTF  LLS+ +  A + +GR +H   IK G+
Sbjct: 398 YTQSGYYKEGLESFKMMKMER----KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF 453

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            A++I+GN+L+ +YAKCG +D   ++F  +S  DI+SWN ++++            +  E
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINE 513

Query: 556 MKREGFAPDDISILGVLQAC 575
           M+ EG  PD+ ++LG+L  C
Sbjct: 514 MRTEGLMPDEATVLGILPMC 533



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 197/403 (48%), Gaps = 7/403 (1%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAG 239
           +H+  I SG   +V     LIS Y        + +VFR ++   +V   N +I      G
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
               A   +  +     +P+ +TF +VI+ C   L +E G  +H  A++ G   ++ +GN
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ MY +    + A  +F+ +S R+ +SW +LISGY  +G    A++ + +F   G+  
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   +++V+  C     ++ G+ +HG   K G   DV +G  L+ +Y K   L+ AR + 
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
              + K +  +N ++ G+ + +   E  V +      + G  PD ++ +  +        
Sbjct: 281 SKMAVKDSVTWNTMICGYAQ-LGRHEASVKLFMDM--IDGFVPDMLSITSTIRACGQSGD 337

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  G+ +H Y I +G+  D +  N LI MYAKCG +  A ++F     +D V+WN++++ 
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           Y   G  K  L  F+ MK E   PD ++   VL   I+S L++
Sbjct: 398 YTQSGYYKEGLESFKMMKMER-KPDSVTF--VLLLSIFSQLAD 437



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 181/369 (49%), Gaps = 5/369 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SGDL++G+ VH +L+ SG + DT   N LI++YAK   L  AQ++FD    + ++TW SL
Sbjct: 335 SGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSL 394

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY   G Y+  L  +  M + E K +  T  ++L   S L D   G  IH   IK GF
Sbjct: 395 INGYTQSGYYKEGLE-SFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF 453

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E  + +G SL+ +Y   G   +   VF  ++  D+   N +I       +  + F +   
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINE 513

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + +    P++ T   ++ +C       +GK++HG   K G    + +GNA++ MY K G 
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGS 573

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E   ++F  + E+++++WTALIS +   G G KA+  F +    G+  DS      I  
Sbjct: 574 LENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFA 633

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           CS    ++ GL+     +K  Y  + R+     +VD+ A+ G L  A   +     K  A
Sbjct: 634 CSHSGMVKEGLRFFD-RMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDA 692

Query: 429 E-FNAILSG 436
             + A+LS 
Sbjct: 693 SLWGALLSA 701



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 3/175 (1%)

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS- 526
           S LL   +S     + R++H+  I +G +  VI    LI+ YA+      +  +F+ IS 
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
             ++  WN+++ A   +GL   AL  + EM+ +   PD  +   V+ +C      E G C
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELG-C 141

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           + +E     G    L     ++D+  R   L  A  +       +S + W +L+S
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDS-VSWNSLIS 195


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 217/685 (31%), Positives = 356/685 (51%), Gaps = 6/685 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG+ +   ++KSG ++     N+LI++      +D A  +FD M  R  I+W S+  
Sbjct: 265 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 324

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y  +G  E    I   M R  ++ N  T S +L     ++ + +G  IH   +K GF++
Sbjct: 325 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 384

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            V V  +L+ MY  +G   EA  VF+ +  KD+   N ++  +   G S  A  +   ++
Sbjct: 385 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 444

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           SS    N  TFT+ ++ C+     E+G+ LHGL V  G+     +GNA+V+MYGK G   
Sbjct: 445 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 504

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           E+ R+   +  R++++W ALI GY       KA+  F      G+  +   + +V+  C 
Sbjct: 505 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 564

Query: 373 VCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  +L E G  LH + +  G+ SD  +  +L+ +YAK GDL S++ L +G   +    +N
Sbjct: 565 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 624

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+L+          E+V+ L S+ R  G+  D  +FS  LS +A  A L  G+ LH  ++
Sbjct: 625 AMLAANAHH--GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 682

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+  D  + NA   MY+KCG I    ++     +R + SWN ++SA   HG  +    
Sbjct: 683 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 742

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
            F EM   G  P  ++ + +L AC + GL + G+  ++ I + +GL P +EH  C++DLL
Sbjct: 743 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 802

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GR+GRL+EA   I+  P   + L+WR+L++  K+  N      A++ L  LEP+D   ++
Sbjct: 803 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 862

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L SNM+A  G  ++   VR  M    + K+  CSW+++  K+  F    + HP++ EIY+
Sbjct: 863 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 922

Query: 732 KLDLLNDEMKLK--VKDSSAFELQD 754
           KL+ +   +K    V D+S   LQD
Sbjct: 923 KLEDIKKLIKESGYVADTSQ-ALQD 946



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 167/577 (28%), Positives = 274/577 (47%), Gaps = 52/577 (9%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH F+ KSG  +D + +  +++LY  +  +  ++K+F+ M  R+ ++WTSL+ GY D
Sbjct: 193 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 252

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G+ E V+    D+Y+ E                       G QI    +KSG E+ + V
Sbjct: 253 KGEPEEVI----DIYKDES---------------------LGRQIIGQVVKSGLESKLAV 287

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLISM    G    A  +F  ++ +D    N +   Y + G  E +F +F  +     
Sbjct: 288 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 347

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E N  T + ++SV       + G+ +HGL VK G    + V N ++ MY   G S EA  
Sbjct: 348 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 407

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  +  ++LISW +L++ +V  G    A+      +  G   +     + +  C     
Sbjct: 408 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 467

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
            E G  LHG  +  G   +  +G ALV +Y K G++  +R +L     +    +NA++ G
Sbjct: 468 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 527

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV------RGRSLHAYS 490
           + E   +D +  +  F   R+ G+  + +T   +LS     ACL+      RG+ LHAY 
Sbjct: 528 YAED--EDPDKALAAFQTMRVEGVSSNYITVVSVLS-----ACLLPGDLLERGKPLHAYI 580

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +  G+ +D  V N+LITMYAKCG +  +  +F G+ +R+I++WNAML+A A HG G+  L
Sbjct: 581 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 640

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL--EH----F 604
            L  +M+  G + D  S    L A          + +  E +Q++GL   L  EH    F
Sbjct: 641 KLVSKMRSFGVSLDQFSFSEGLSAA-------AKLAVLEEGQQLHGLAVKLGFEHDSFIF 693

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               D+  + G + E + ++  S     P  W  L+S
Sbjct: 694 NAAADMYSKCGEIGEVVKMLPPSVNRSLP-SWNILIS 729



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 245/507 (48%), Gaps = 34/507 (6%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+AVHA  +K   +      N LIN+Y KF R+  A+ LFD M VR+ ++W +++ G + 
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEAC----SLLEDRIFGEQIHAFAIKSGFEN 192
            G Y   +     M     K +    + ++ AC    S+  +   G Q+H F  KSG  +
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE---GVQVHGFVAKSGLLS 207

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +V+V T+++ +Y   G    +  VF  +  ++V     +++ Y+  GE E    ++    
Sbjct: 208 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD-- 265

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                              E+L    G+Q+ G  VK G+  +++V N++++M G  G  +
Sbjct: 266 -------------------ESL----GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 302

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +FD +SER+ ISW ++ + Y ++GH  ++   F          +S+ ++T++    
Sbjct: 303 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 362

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              + + G  +HG  +K G+ S V +   L+ +YA  G    A ++      K    +N+
Sbjct: 363 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNS 422

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++ F+        D + L      +G   + VTF+  L+   +     +GR LH   + 
Sbjct: 423 LMASFVND--GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 480

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +G   + I+GNAL++MY K G +  + ++   +  RD+V+WNA++  YA       AL  
Sbjct: 481 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 540

Query: 553 FEEMKREGFAPDDISILGVLQACIYSG 579
           F+ M+ EG + + I+++ VL AC+  G
Sbjct: 541 FQTMRVEGVSSNYITVVSVLSACLLPG 567



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 206/471 (43%), Gaps = 44/471 (9%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G  +HA  +K     +V    +LI+MY   G  + A ++F  +  ++    N M+    +
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREIS 296
            G        F  +     +P+ +   ++++ C  +  +  EG Q+HG   K G++ ++ 
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V  AI+ +YG +G+   + ++F+ + +RN++SWT+L+ GY   G   + I+         
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVID--------- 261

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
                           +  +  LG Q+ G  +K G  S + +  +L+ +    G++  A 
Sbjct: 262 ----------------IYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN 305

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            + D  S + T  +N+I + + +      E+   +FS  R    E +  T S LLS+   
Sbjct: 306 YIFDQMSERDTISWNSIAAAYAQN--GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 363

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
                 GR +H   +K G+ + V V N L+ MYA  G    A  +FK +  +D++SWN++
Sbjct: 364 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 423

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI----- 591
           ++++   G    AL L   M   G + + ++    L AC      E G  L   +     
Sbjct: 424 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 483

Query: 592 --EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
              QI G          +V + G+ G +SE+  ++   P     + W  L+
Sbjct: 484 FYNQIIG--------NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 525



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 220/483 (45%), Gaps = 80/483 (16%)

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV---------NFMILEYNK 237
           K GF++ +F GT++      +G       VF G  +   + +         N  I  + K
Sbjct: 3   KVGFKSLIFPGTTVEHRRIRAGQLATQSPVFSGRRFSFAQWICLPPVQDATNLDIAMFEK 62

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE-EGKQLHGLAVKFGVVR-EI 295
           +G  +           + + P    F     + +  + +E  G+ +H L VK G+VR  +
Sbjct: 63  SGRKK-----------NHWNPEISCFDQ---IGFSQITIETTGRAVHALCVK-GLVRLSV 107

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
              N ++ MY K G  + A  +FD +  RN +SW  ++SG VR G   + +  F +  DL
Sbjct: 108 LHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL 167

Query: 356 GICCDSSCLATVIDGCSVCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
           GI   S  +A+++  C    ++   G+Q+HGF  K G LSDV + TA++ +Y   G +  
Sbjct: 168 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 227

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           +R + +    +    + +++ G+ +K   + E+V+ ++  + L                 
Sbjct: 228 SRKVFEEMPDRNVVSWTSLMVGYSDK--GEPEEVIDIYKDESL----------------- 268

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
                   GR +    +K+G  + + V N+LI+M    G++D A  IF  +S+RD +SWN
Sbjct: 269 --------GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 320

Query: 535 AMLSAYALHGLGKGALLLFEEMKR---EGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           ++ +AYA +G  + +  +F  M+R   E  +    ++L VL    +     G        
Sbjct: 321 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG-------- 372

Query: 592 EQIYGL--RPILEHFACMVDLLGR----AGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
             I+GL  +   +   C+ + L R    AGR  EA NL+    F + P   + L+S + L
Sbjct: 373 --IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA-NLV----FKQMPT--KDLISWNSL 423

Query: 646 MAN 648
           MA+
Sbjct: 424 MAS 426


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 214/717 (29%), Positives = 385/717 (53%), Gaps = 16/717 (2%)

Query: 38  SQVAYLCSISSVSCSERTLLFNDWPQ-----LVKI-SIGSGDLKLGQAVHAFLLKSGSQN 91
           S+  +L   + +  +   L F++W       LVK+       L + Q +H+  LK+G  +
Sbjct: 111 SRFTHLIIFTKIVENSELLKFHEWLMERRNLLVKLLETCCSKLSISQ-LHSQCLKAGLVH 169

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D+F    L  LYA++  +  A KLF     R+   W +L++ Y  +G++   L +   M 
Sbjct: 170 DSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMN 229

Query: 152 RS-----EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH 206
                  EE+ + ++ S+ L++C+ L   + G+ IH F  K   + ++FVG++LI +Y  
Sbjct: 230 NVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTK 289

Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD-FEPNDYTFTN 265
            G   +A  VF      DV     +I  Y ++G  E+A   F  ++ S+   P+  T  +
Sbjct: 290 CGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVS 349

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
           V S C +    + G+ +HG   + G+  ++ + N+++ +YGK G  + A  +F  +S+++
Sbjct: 350 VASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKD 409

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
           +ISW+ +++ Y  +G     ++ F E LD  I  +   + +V+  C+  SNLE G+++H 
Sbjct: 410 IISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE 469

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
            A+ +G+  +  + TAL+D+Y K    + A  L +    K    +  + SG+ +     E
Sbjct: 470 LAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHE 529

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
              M +F     +G  PD +   ++L+  +    L +   LHA+ IK G+  +  +G +L
Sbjct: 530 S--MWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASL 587

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-FAPD 564
           I +YAKC SI+ A ++FKG++ +D+V+W+++++AY  HG G+ AL LF +M       P+
Sbjct: 588 IEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPN 647

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
           +++ + +L AC +SGL + GI +F+ +   Y L+P  EH+A MVDLLGR G L  A+++I
Sbjct: 648 NVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVI 707

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
           N+ P    P +W  L+   ++  N K   +A+K L  L+P  AG +IL+SN+Y+      
Sbjct: 708 NNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWH 767

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            A K+R  + + RL+K  G S +E+ +++  F+A  + H ES+ IY  L  L+ +M+
Sbjct: 768 SATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMR 824


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 213/704 (30%), Positives = 384/704 (54%), Gaps = 24/704 (3%)

Query: 50  SCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN 107
           SC+E+    N++    +V+     G L     +H  ++K G   D +   +LI+ Y K  
Sbjct: 134 SCNEKP---NEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHA 190

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE 167
            +D A+ LFDG+ V+++ TWT++I GY   G  +  L +   M       +++  S +L 
Sbjct: 191 CIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLS 250

Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
           AC +L+    G+QIH + ++SG   +V +    I  YF     +    +F  +  K+V  
Sbjct: 251 ACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVS 310

Query: 228 VNFMILEYNKAGESEMAFH-----VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
              +I     AG  + +FH     +FV +    + P+ +  T+V++ C   + +E+G+Q+
Sbjct: 311 WTTVI-----AGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQV 365

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H  A+K  +  +  V N ++ MY K     +A ++F+ ++  +L+S+ A+I GY R    
Sbjct: 366 HAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKL 425

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVC-SNLELGLQLHGFAIKHGYLSDVRLGTA 401
            +A++ F E + L +   +  +   + G S    +LEL  Q+HG  IK+G   D   G+A
Sbjct: 426 CEALDLFRE-MRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSA 484

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L+D+Y+K   +  AR++ +    K    + A+ SG+ ++   + E+ + L+   +++ ++
Sbjct: 485 LIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQ--SENEESLKLYKCLQMSRLK 542

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           P+  TF+ +++ +++ A L  G+  H   IK G+  D  V N L+ MYAK GSI+ A + 
Sbjct: 543 PNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKA 602

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           F   + +D   WN+M++ YA HG  + AL +FE+M  EG  P+ ++ +GVL AC ++GL 
Sbjct: 603 FISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLL 662

Query: 582 EGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           + G   F+ + Q +G+ P +EH+ CMV LLGRAG+L EA   I   P  ++ ++WR+L+S
Sbjct: 663 DLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLS 721

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
             ++  N +    A++  +   P D+GS++L+SN++A +GM     ++R  M+   + KE
Sbjct: 722 ACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKE 781

Query: 702 AGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVK 745
            GCSWIE+++++H F+A    H +S  I     L+ D + L++K
Sbjct: 782 PGCSWIEVNNEIHKFIAKDTAHRDSAPI----SLVLDNLLLQIK 821



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 285/568 (50%), Gaps = 8/568 (1%)

Query: 78  QAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           + +H+ ++  G  ++D F  N L++ Y+K N ++ A KLFD M  ++ +TW+S++  Y  
Sbjct: 58  KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117

Query: 137 DGDYESVLGIACDMYRS-EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
                  L +     RS  EK NE+  + ++ AC+         QIH   +K G+  +V+
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V TSLI  Y    C  +A  +F GL  K       +I  Y+K G S+++  +F  +    
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGH 237

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P+ Y  ++V+S C     +E GKQ+H   ++ G+V ++S+ N  +  Y K    +   
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGR 297

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++FD + ++N++SWT +I+G +++     A++ F+E   +G   D+    +V++ C    
Sbjct: 298 KLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLV 357

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            LE G Q+H +AIK    +D  +   L+D+YAK   L  AR + +  +      +NA++ 
Sbjct: 358 ALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIE 417

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+  +  D   + + LF + RL+   P  + F  LL +SAS   L     +H   IK G 
Sbjct: 418 GYSRQ--DKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGV 475

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
           + D   G+ALI +Y+KC  +  A  +F+ I D+DIV W AM S Y      + +L L++ 
Sbjct: 476 SLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKC 535

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI-YGLRPILEHFACMVDLLGRA 614
           ++     P++ +   V+ A         G    N++ ++ +   P + +   +VD+  ++
Sbjct: 536 LQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVAN--TLVDMYAKS 593

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSV 642
           G + EA     S+ + ++   W ++++ 
Sbjct: 594 GSIEEAHKAFISTNWKDTA-CWNSMIAT 620



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 144/294 (48%), Gaps = 3/294 (1%)

Query: 49  VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           +S S  TLL   +  L+ +S     L+L   +H  ++K G   D F  + LI++Y+K +R
Sbjct: 437 LSLSSPTLLI--FVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSR 494

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           +  A+ +F+ +  +  + WT++  GY    + E  L +   +  S  K NE T + ++ A
Sbjct: 495 VGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITA 554

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
            S +     G+Q H   IK GF+++ FV  +L+ MY  SG   EA   F    +KD  C 
Sbjct: 555 ASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACW 614

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N MI  Y + GE+E A  VF  ++    +PN  TF  V+S C     ++ G        +
Sbjct: 615 NSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ 674

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGH 341
           FG+   I     +V++ G+ G   EA+   + +  ++  + W +L+S    SG+
Sbjct: 675 FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGN 728


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 212/688 (30%), Positives = 375/688 (54%), Gaps = 14/688 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML--- 120
           L+K  I + D +LG+ VHA L++   + D+   N+LI+LY+K      A+ +F+ M    
Sbjct: 68  LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  ++W++++  Y ++G     + +  +        N++  + ++ ACS  +    G  
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 181 IHAFAIKSG-FENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
              F +K+G FE++V VG SLI M+      F  A  VF  ++  +V     MI    + 
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G    A   F+ ++ S FE + +T ++V S C E   +  GKQLH  A++ G+V ++   
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC- 306

Query: 299 NAIVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYVRSGH-GGKAINGFLEFLD 354
            ++V MY K    G  ++  ++FD + + +++SWTALI+GY+++ +   +AIN F E + 
Sbjct: 307 -SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365

Query: 355 LG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
            G +  +    ++    C   S+  +G Q+ G A K G  S+  +  +++ ++ K   ++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            A+   +  S K    +N  L G    +  + E    L S+     +     TF+ LLS 
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNL--NFEQAFKLLSEITERELGVSAFTFASLLSG 483

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            A+   + +G  +H+  +K G + +  V NALI+MY+KCGSID A ++F  + +R+++SW
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            +M++ +A HG     L  F +M  EG  P++++ + +L AC + GL   G   FN + +
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            + ++P +EH+ACMVDLL RAG L++A   IN+ PF    L+WRT +   ++ +N++   
Sbjct: 604 DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGK 663

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
           LA++++L+L+P +  ++I +SN+YA  G  +E+ ++R  M +  L KE GCSWIE+  K+
Sbjct: 664 LAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKI 723

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK 741
           H F      HP + +IY +LD L  E+K
Sbjct: 724 HKFYVGDTAHPNAHQIYDELDRLITEIK 751



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 217/441 (49%), Gaps = 28/441 (6%)

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVI 165
           NR++VA +L               I  +L+ GD    +     M R      +  T S +
Sbjct: 24  NRINVADRL---------------ILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSL 68

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF---RGLAY 222
           L++C    D   G+ +HA  I+   E +  +  SLIS+Y  SG   +AE+VF   R    
Sbjct: 69  LKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK 128

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +DV   + M+  Y   G    A  VFV  L     PNDY +T VI  C  +  V  G+  
Sbjct: 129 RDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVT 188

Query: 283 HGLAVKFGVVR-EISVGNAIVTMYGKHGMS-EEAERMFDAISERNLISWTALISGYVRSG 340
            G  +K G    ++ VG +++ M+ K   S E A ++FD +SE N+++WT +I+  ++ G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +AI  FL+ +  G   D   L++V   C+   NL LG QLH +AI+ G + DV    
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--C 306

Query: 401 ALVDIYAK---GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +LVD+YAK    G +   R + D         + A+++G+M K  +   + + LFS+   
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM-KNCNLATEAINLFSEMIT 365

Query: 458 AG-MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
            G +EP+  TFS       + +    G+ +   + K G A++  V N++I+M+ K   ++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425

Query: 517 GAFQIFKGISDRDIVSWNAML 537
            A + F+ +S++++VS+N  L
Sbjct: 426 DAQRAFESLSEKNLVSYNTFL 446


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 211/675 (31%), Positives = 358/675 (53%), Gaps = 31/675 (4%)

Query: 69  IGSGDLKLGQAVHAFLLKSGS--QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           I  GD + G+AVH  +++ G   + D F AN L+N+Y K   L  A++LFD M  R+ ++
Sbjct: 70  IARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVS 129

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           + +L++ +   GD+E+   +   +     + N+   + +L+    ++       +H+ A 
Sbjct: 130 FVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW 189

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G ++N FVG+ LI  Y       +AE+VF G+  KD      M+  Y++    E AF 
Sbjct: 190 KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR 249

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYEN---LGVEEGKQ-LHGLAVKFGVVREISVGNAIV 302
                                  C ++   L +   +Q +HG A+K     E  VG A++
Sbjct: 250 -----------------------CAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALL 286

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G  ++A   F+ I   ++I  + +IS Y +S    +A   FL  +   +  +  
Sbjct: 287 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 346

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            L++V+  C+    L+ G Q+H  AIK G+ SD+ +G AL+D YAK  D+ S+  +    
Sbjct: 347 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 406

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                  +N I+ GF +  +   E+ + +F + + A M    VT+S +L   AS A +  
Sbjct: 407 RDANEVSWNTIVVGFSQ--SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRH 464

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
              +H    K+ +  D ++GN+LI  YAKCG I  A ++F+ + +RDI+SWNA++S YAL
Sbjct: 465 AGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYAL 524

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG    AL LF+ M +     +DI+ + +L  C  +GL   G+ LF+ +   +G++P +E
Sbjct: 525 HGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSME 584

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ C+V LLGRAGRL++A+  I   P + S ++WR L+S   +  N      +++++L++
Sbjct: 585 HYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEI 644

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EP+D  +++L+SNMYA  G LD+ A +R +M ++ + K  G SW+EI  ++H F     D
Sbjct: 645 EPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVD 704

Query: 723 HPESEEIYSKLDLLN 737
           HP+   I + L+ LN
Sbjct: 705 HPDMRVINAMLEWLN 719



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 240/482 (49%), Gaps = 23/482 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K++I      L   VH+   K G  ++ F  + LI+ Y+  + +  A+ +F+G++ + 
Sbjct: 168 MLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKD 227

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           A+ WT+++  Y ++   E                N   C+   ++CSLL      + IH 
Sbjct: 228 AVVWTAMVSCYSENDCPE----------------NAFRCA---QSCSLLAISCARQGIHG 268

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK+  +    VG +L+ MY   G  ++A   F  + Y DV  ++FMI  Y ++ ++E 
Sbjct: 269 CAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQ 328

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           AF +F+ L+ S   PN+Y+ ++V+  C   + ++ GKQ+H  A+K G   ++ VGNA++ 
Sbjct: 329 AFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMD 388

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K    + + ++F ++ + N +SW  ++ G+ +SG G +A++ F E     + C    
Sbjct: 389 FYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVT 448

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            ++V+  C+  +++    Q+H    K  + +D  +G +L+D YAK G ++ A  +     
Sbjct: 449 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLM 508

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +NAI+SG+   +     D + LF +   + +E + +TF  LLS+  S   +  G
Sbjct: 509 ERDIISWNAIISGY--ALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHG 566

Query: 484 RSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYA 541
            SL  +  I  G    +     ++ +  + G ++ A Q    I S    + W A+LS+  
Sbjct: 567 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 626

Query: 542 LH 543
           +H
Sbjct: 627 IH 628



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 24/278 (8%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS--DVRLGTALVDIYAKGGDLKSARM 417
           DS   A  + GC    +   G  +HG  ++ G +   D+     L+++Y K G L SAR 
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L D    +    F  ++    ++   D E    LF + R  G E +    + +L L+ + 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQR--GDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
                   +H+ + K G+  +  VG+ LI  Y+ C  +  A  +F GI  +D V W AM+
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           S Y+ +   + A    +            S+L +  +C   G+    I   N+ E   G 
Sbjct: 236 SCYSENDCPENAFRCAQS----------CSLLAI--SCARQGIHGCAIKTLNDTEPHVG- 282

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
                    ++D+  + G + +A       P+ +  LL
Sbjct: 283 -------GALLDMYAKCGDIKDARLAFEMIPYDDVILL 313



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)

Query: 47  SSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF 106
           + + C++ T     +  +++    +  ++    +H  + KS   NDT   N+LI+ YAK 
Sbjct: 440 AQMPCTQVT-----YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKC 494

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL 166
             +  A K+F  ++ R  I+W ++I GY   G     L +   M +S  + N+ T   +L
Sbjct: 495 GYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 554

Query: 167 EAC 169
             C
Sbjct: 555 SVC 557


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 247/777 (31%), Positives = 393/777 (50%), Gaps = 62/777 (7%)

Query: 12  PPFKSQ--QSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISI 69
           PP KS   + L P +    +     + K+  ++ C+ +  S SE       +  L+    
Sbjct: 58  PPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSH-CNTTLFSSSE------TFESLINRYQ 110

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           GS   +  + +H   +K G   + F +N LIN+Y +   L  AQKLFD M  R+ +TW  
Sbjct: 111 GSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWAC 170

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC--SLLEDRIFGEQIHAFAIK 187
           LI GY  +G  +       DM R+    N +     L AC  S       G QIH    K
Sbjct: 171 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 230

Query: 188 SGFENNVFVGTSLISMYFHSGCF---REAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           + + ++V V   LISMY    C     +A +VF G+  ++    N +I  Y++ G++  A
Sbjct: 231 TRYGSDVVVCNVLISMY--GSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSA 288

Query: 245 FHVFVHL----LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGN 299
           + +F  +    L   F+PND  F+   SV  E  G  +G+++H   ++ G+   ++++GN
Sbjct: 289 YDLFSSMQKEGLGFSFKPND-AFSE-FSVLEE--GRRKGREVHAHVIRTGLNDNKVAIGN 344

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS-------------------- 339
            +V MY K G   +A  +F+ + E++ +SW +LISG  ++                    
Sbjct: 345 GLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVS 404

Query: 340 ------------GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
                           +A+  FL+ +  G          ++   S  S  E+  Q+H   
Sbjct: 405 WNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALV 464

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAILSGFMEKIADDEE 446
           +K+    D  +G AL+  Y K G++     +    S  +    +N+++SG++      + 
Sbjct: 465 LKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKA 524

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
             +V F  Q+  G   D  TF+ +LS  AS A L RG  +HA  I+    +DV+VG+AL+
Sbjct: 525 MDLVWFMMQK--GQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALV 582

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MY+KCG ID A + F+ +  R++ SWN+M+S YA HG G+ AL LF  M  +G  PD +
Sbjct: 583 DMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHV 642

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + +GVL AC + G  E G   F  + ++Y L P +EHF+CMVDLLGRAG+L E  + INS
Sbjct: 643 TFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINS 702

Query: 627 SPFSESPLLWRTLVSVSKLM--ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
            P   + L+WRT++         N++    A++ LL+LEP++A +++L++NMYA     +
Sbjct: 703 MPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWE 762

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           + AK RT M +  + KEAGCSW+ +   +H FVA  K HPE + IY KL  LN +M+
Sbjct: 763 DVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMR 819


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 217/685 (31%), Positives = 356/685 (51%), Gaps = 6/685 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG+ +   ++KSG ++     N+LI++      +D A  +FD M  R  I+W S+  
Sbjct: 175 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 234

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y  +G  E    I   M R  ++ N  T S +L     ++ + +G  IH   +K GF++
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            V V  +L+ MY  +G   EA  VF+ +  KD+   N ++  +   G S  A  +   ++
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           SS    N  TFT+ ++ C+     E+G+ LHGL V  G+     +GNA+V+MYGK G   
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           E+ R+   +  R++++W ALI GY       KA+  F      G+  +   + +V+  C 
Sbjct: 415 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 474

Query: 373 VCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  +L E G  LH + +  G+ SD  +  +L+ +YAK GDL S++ L +G   +    +N
Sbjct: 475 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 534

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+L+          E+V+ L S+ R  G+  D  +FS  LS +A  A L  G+ LH  ++
Sbjct: 535 AMLAANAHH--GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 592

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+  D  + NA   MY+KCG I    ++     +R + SWN ++SA   HG  +    
Sbjct: 593 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 652

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
            F EM   G  P  ++ + +L AC + GL + G+  ++ I + +GL P +EH  C++DLL
Sbjct: 653 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 712

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GR+GRL+EA   I+  P   + L+WR+L++  K+  N      A++ L  LEP+D   ++
Sbjct: 713 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 772

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L SNM+A  G  ++   VR  M    + K+  CSW+++  K+  F    + HP++ EIY+
Sbjct: 773 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 832

Query: 732 KLDLLNDEMKLK--VKDSSAFELQD 754
           KL+ +   +K    V D+S   LQD
Sbjct: 833 KLEDIKKLIKESGYVADTSQ-ALQD 856



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 173/577 (29%), Positives = 285/577 (49%), Gaps = 27/577 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH F+ KSG  +D + +  +++LY  +  +  ++K+F+ M  R+ ++WTSL+ GY D
Sbjct: 78  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G+ E V+ I   M       NE++ S+++ +C LL+D   G QI    +KSG E+ + V
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 197

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLISM    G    A  +F  ++ +D    N +   Y + G  E +F +F  +     
Sbjct: 198 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 257

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E N  T + ++SV       + G+ +HGL VK G    + V N ++ MY   G S EA  
Sbjct: 258 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  +  ++LISW +L++ +V  G    A+      +  G   +     + +  C     
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
            E G  LHG  +  G   +  +G ALV +Y K G++  +R +L     +    +NA++ G
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV------RGRSLHAYS 490
           + E   +D +  +  F   R+ G+  + +T   +LS     ACL+      RG+ LHAY 
Sbjct: 438 YAED--EDPDKALAAFQTMRVEGVSSNYITVVSVLS-----ACLLPGDLLERGKPLHAYI 490

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +  G+ +D  V N+LITMYAKCG +  +  +F G+ +R+I++WNAML+A A HG G+  L
Sbjct: 491 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 550

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL--EH----F 604
            L  +M+  G + D  S    L A          + +  E +Q++GL   L  EH    F
Sbjct: 551 KLVSKMRSFGVSLDQFSFSEGLSAA-------AKLAVLEEGQQLHGLAVKLGFEHDSFIF 603

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               D+  + G + E + ++  S     P  W  L+S
Sbjct: 604 NAAADMYSKCGEIGEVVKMLPPSVNRSLP-SWNILIS 639



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 238/482 (49%), Gaps = 9/482 (1%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y KF R+  A+ LFD M VR+ ++W +++ G +  G Y   +     M     K +   
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 162 CSVILEAC----SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
            + ++ AC    S+  +   G Q+H F  KSG  ++V+V T+++ +Y   G    +  VF
Sbjct: 61  IASLVTACGRSGSMFRE---GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +  ++V     +++ Y+  GE E    ++  +       N+ + + VIS C       
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
            G+Q+ G  VK G+  +++V N++++M G  G  + A  +FD +SER+ ISW ++ + Y 
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           ++GH  ++   F          +S+ ++T++       + + G  +HG  +K G+ S V 
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +   L+ +YA  G    A ++      K    +N++++ F+        D + L      
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND--GRSLDALGLLCSMIS 355

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G   + VTF+  L+   +     +GR LH   + +G   + I+GNAL++MY K G +  
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           + ++   +  RD+V+WNA++  YA       AL  F+ M+ EG + + I+++ VL AC+ 
Sbjct: 416 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 475

Query: 578 SG 579
            G
Sbjct: 476 PG 477



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 205/446 (45%), Gaps = 19/446 (4%)

Query: 203 MYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYT 262
           MY   G  + A ++F  +  ++    N M+    + G        F  +     +P+ + 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 263 FTNVISVCYENLGV-EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
             ++++ C  +  +  EG Q+HG   K G++ ++ V  AI+ +YG +G+   + ++F+ +
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
            +RN++SWT+L+ GY   G   + I+ +      G+ C+ + ++ VI  C +  +  LG 
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           Q+ G  +K G  S + +  +L+ +    G++  A  + D  S + T  +N+I + + +  
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN- 239

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
               E+   +FS  R    E +  T S LLS+         GR +H   +K G+ + V V
Sbjct: 240 -GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            N L+ MYA  G    A  +FK +  +D++SWN++++++   G    AL L   M   G 
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEI-------EQIYGLRPILEHFACMVDLLGRA 614
           + + ++    L AC      E G  L   +        QI G          +V + G+ 
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG--------NALVSMYGKI 410

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLV 640
           G +SE+  ++   P     + W  L+
Sbjct: 411 GEMSESRRVLLQMP-RRDVVAWNALI 435


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 217/685 (31%), Positives = 356/685 (51%), Gaps = 6/685 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG+ +   ++KSG ++     N+LI++      +D A  +FD M  R  I+W S+  
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y  +G  E    I   M R  ++ N  T S +L     ++ + +G  IH   +K GF++
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 277

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            V V  +L+ MY  +G   EA  VF+ +  KD+   N ++  +   G S  A  +   ++
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 337

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           SS    N  TFT+ ++ C+     E+G+ LHGL V  G+     +GNA+V+MYGK G   
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           E+ R+   +  R++++W ALI GY       KA+  F      G+  +   + +V+  C 
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457

Query: 373 VCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  +L E G  LH + +  G+ SD  +  +L+ +YAK GDL S++ L +G   +    +N
Sbjct: 458 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 517

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+L+          E+V+ L S+ R  G+  D  +FS  LS +A  A L  G+ LH  ++
Sbjct: 518 AMLAANAHH--GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 575

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+  D  + NA   MY+KCG I    ++     +R + SWN ++SA   HG  +    
Sbjct: 576 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 635

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
            F EM   G  P  ++ + +L AC + GL + G+  ++ I + +GL P +EH  C++DLL
Sbjct: 636 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 695

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GR+GRL+EA   I+  P   + L+WR+L++  K+  N      A++ L  LEP+D   ++
Sbjct: 696 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 755

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L SNM+A  G  ++   VR  M    + K+  CSW+++  K+  F    + HP++ EIY+
Sbjct: 756 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 815

Query: 732 KLDLLNDEMKLK--VKDSSAFELQD 754
           KL+ +   +K    V D+S   LQD
Sbjct: 816 KLEDIKKLIKESGYVADTSQ-ALQD 839



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 173/577 (29%), Positives = 285/577 (49%), Gaps = 27/577 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH F+ KSG  +D + +  +++LY  +  +  ++K+F+ M  R+ ++WTSL+ GY D
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G+ E V+ I   M       NE++ S+++ +C LL+D   G QI    +KSG E+ + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLISM    G    A  +F  ++ +D    N +   Y + G  E +F +F  +     
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E N  T + ++SV       + G+ +HGL VK G    + V N ++ MY   G S EA  
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  +  ++LISW +L++ +V  G    A+      +  G   +     + +  C     
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
            E G  LHG  +  G   +  +G ALV +Y K G++  +R +L     +    +NA++ G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV------RGRSLHAYS 490
           + E   +D +  +  F   R+ G+  + +T   +LS     ACL+      RG+ LHAY 
Sbjct: 421 YAED--EDPDKALAAFQTMRVEGVSSNYITVVSVLS-----ACLLPGDLLERGKPLHAYI 473

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +  G+ +D  V N+LITMYAKCG +  +  +F G+ +R+I++WNAML+A A HG G+  L
Sbjct: 474 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 533

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL--EH----F 604
            L  +M+  G + D  S    L A          + +  E +Q++GL   L  EH    F
Sbjct: 534 KLVSKMRSFGVSLDQFSFSEGLSAA-------AKLAVLEEGQQLHGLAVKLGFEHDSFIF 586

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               D+  + G + E + ++  S     P  W  L+S
Sbjct: 587 NAAADMYSKCGEIGEVVKMLPPSVNRSLP-SWNILIS 622



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 187/392 (47%), Gaps = 19/392 (4%)

Query: 257 EPNDYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           +P+ +   ++++ C  +  +  EG Q+HG   K G++ ++ V  AI+ +YG +G+   + 
Sbjct: 38  KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 97

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++F+ + +RN++SWT+L+ GY   G   + I+ +      G+ C+ + ++ VI  C +  
Sbjct: 98  KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +  LG Q+ G  +K G  S + +  +L+ +    G++  A  + D  S + T  +N+I +
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
            + +      E+   +FS  R    E +  T S LLS+         GR +H   +K G+
Sbjct: 218 AYAQN--GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 275

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            + V V N L+ MYA  G    A  +FK +  +D++SWN++++++   G    AL L   
Sbjct: 276 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 335

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI-------EQIYGLRPILEHFACMV 608
           M   G + + ++    L AC      E G  L   +        QI G          +V
Sbjct: 336 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG--------NALV 387

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            + G+ G +SE+  ++   P     + W  L+
Sbjct: 388 SMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 418



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 167/335 (49%), Gaps = 29/335 (8%)

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL-ELGLQ 382
           RN +SW  ++SG VR G   + +  F +  DLGI   S  +A+++  C    ++   G+Q
Sbjct: 4   RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +HGF  K G LSDV + TA++ +Y   G +  +R + +    +    + +++ G+ +K  
Sbjct: 64  VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK-- 121

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
            + E+V+ ++   R  G+  +  + S ++S          GR +    +K+G  + + V 
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR---E 559
           N+LI+M    G++D A  IF  +S+RD +SWN++ +AYA +G  + +  +F  M+R   E
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL--RPILEHFACMVDLLGR---- 613
             +    ++L VL    +     G          I+GL  +   +   C+ + L R    
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRG----------IHGLVVKMGFDSVVCVCNTLLRMYAG 291

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
           AGR  EA NL+    F + P   + L+S + LMA+
Sbjct: 292 AGRSVEA-NLV----FKQMPT--KDLISWNSLMAS 319


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 208/655 (31%), Positives = 338/655 (51%), Gaps = 3/655 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G    K    VH  ++K    +D +  ++L+  Y     LD A+ +  G+  RS
Sbjct: 157 VLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERS 216

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W +L+ GY   GDY  V+ I   +  S ++ +++T   +L+ C  L    +G+ +HA
Sbjct: 217 DVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHA 276

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             IK G E +  + + L+ MY       EA  VF  +   DV   + MI  +++   +  
Sbjct: 277 SVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWE 336

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +FV +     +PN Y F  +  V          + +H   VK G      VG+AI+ 
Sbjct: 337 ALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILN 396

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  ++A   FD I E +  SW  ++S +    +  + +  F +    G   +   
Sbjct: 397 MYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYT 456

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
             +V+  C+   NL  G Q+H   +K G  +D  +   LVD+YA+ G   SA ++ +   
Sbjct: 457 YVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK 516

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +  I+SG+ +   ++ E V+  F       + P   T +  LS+ +  A L  G
Sbjct: 517 ERDAFSWTVIMSGYAK--TEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSG 574

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             LH+++IK+G+ + V+ G AL+ MY KCG+I  A  +F     RD V+WN ++  Y+ H
Sbjct: 575 LQLHSWAIKSGWNSSVVSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQH 633

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G  AL  F++M  EG  PD I+ +GVL AC ++GL   G   F  +  IYG+ P +EH
Sbjct: 634 GHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEH 693

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           +ACMVD+L +AGRL EA +LIN  P +    +WRT++   ++  N + +  A++RL +LE
Sbjct: 694 YACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELE 753

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           P DA S IL+SN+YA  G   +  +VR  + D  + KE GCSWIEI+ ++H F++
Sbjct: 754 PHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLS 808



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/616 (25%), Positives = 285/616 (46%), Gaps = 6/616 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ GQ +HA LL+S    DTF  ++L+N+Y K  RL  A+++FDGM  R  + WT++I  
Sbjct: 66  LRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISA 125

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +   GD +  L +   M +     N  T + +L+ACS      F  Q+H   +K    ++
Sbjct: 126 HTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDD 185

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            +VG+SL+  Y   G    AE V  GL  +     N ++  Y + G+      +   L++
Sbjct: 186 PYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVA 245

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           S  E + YT   V+  C E    + G+ +H   +K G+  +  + + +V MY +   +EE
Sbjct: 246 SGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEE 305

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F  I E +++  +A+IS + R     +A++ F++   +G+  +      +    S 
Sbjct: 306 AYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASR 365

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +  L   +H + +K G+     +G A++++Y K G ++ A +  D      T  +N I
Sbjct: 366 TGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTI 425

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           LS F      + E  + +F Q    G   +  T+  +L    S   L  G  +HA  +K+
Sbjct: 426 LSAFYS--GSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKS 483

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G   D  V   L+ MYA+ G    A  +F+ + +RD  SW  ++S YA     +  +  F
Sbjct: 484 GLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYF 543

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
             M RE   P D ++   L  C        G+ L +   +      ++     +VD+  +
Sbjct: 544 RSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVS--GALVDMYVK 601

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG-SFIL 672
            G +++A  L + S  +   + W T++       +   ++ A K+++D   +  G +F+ 
Sbjct: 602 CGNIADAEMLFHESE-TRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVG 660

Query: 673 VSNMYAGQGMLDEAAK 688
           V +  +  G+L+E  K
Sbjct: 661 VLSACSHAGLLNEGRK 676



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 198/410 (48%), Gaps = 2/410 (0%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L+ C++      G+++HA  ++S    + F+  SL++MY   G   +A  VF G+ ++D+
Sbjct: 57  LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDI 116

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
                MI  +  AG+S+ A  +F  +      PN +T  +V+  C      +   Q+HG 
Sbjct: 117 VAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQ 176

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
            VK   + +  VG+++V  Y   G  + AE +   + ER+ +SW AL++GY R G   + 
Sbjct: 177 VVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRV 236

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +    + +  G       L TV+  C      + G  +H   IK G  +D  L + LV++
Sbjct: 237 MIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEM 296

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           Y++    + A  +            +A++S F     D   + + LF +    G++P+  
Sbjct: 297 YSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRH--DMAWEALDLFVKMSGMGVKPNHY 354

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
            F  +  +++        RS+HAY +K+G+A    VG+A++ MY K G++  A   F  I
Sbjct: 355 IFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLI 414

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            + D  SWN +LSA+      +  L +F++M  EGF+ +  + + VL+ C
Sbjct: 415 HEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCC 464



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 189/423 (44%), Gaps = 3/423 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K  +  G  K GQ+VHA ++K G + D    + L+ +Y++    + A ++F  +  
Sbjct: 256 PTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDE 315

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              +  +++I  +         L +   M     K N +    I    S   D      +
Sbjct: 316 PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSV 375

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA+ +KSGF     VG ++++MY   G  ++A   F  +   D    N ++  +      
Sbjct: 376 HAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNC 435

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           E    +F  +    F  N YT+ +V+  C   + +  G Q+H   +K G+  +  V   +
Sbjct: 436 EQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRML 495

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V MY + G    A  +F+ + ER+  SWT ++SGY ++    K +  F   L   I    
Sbjct: 496 VDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSD 555

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           + LA  +  CS  ++L  GLQLH +AIK G+ S V  G ALVD+Y K G++  A ML   
Sbjct: 556 ATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVSG-ALVDMYVKCGNIADAEMLFHE 614

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              +    +N I+ G+ +         +  F Q    G  PD +TF  +LS  +    L 
Sbjct: 615 SETRDQVAWNTIICGYSQH--GHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLN 672

Query: 482 RGR 484
            GR
Sbjct: 673 EGR 675



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 3/256 (1%)

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           A  +  C+V   L  G +LH   ++     D  L  +L+++Y K G L  AR + DG   
Sbjct: 54  AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           +    + A++S      A D +  + +F++    G+ P+  T + +L   +  +      
Sbjct: 114 RDIVAWTAMISA--HTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTH 171

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +H   +K     D  VG++L+  Y  CG +D A  +  G+ +R  VSWNA+L+ YA HG
Sbjct: 172 QVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHG 231

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
             +  +++ E++   G      ++  VL+ C+  GL++ G  +   + +  GL       
Sbjct: 232 DYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIK-RGLETDNVLN 290

Query: 605 ACMVDLLGRAGRLSEA 620
           +C+V++  R     EA
Sbjct: 291 SCLVEMYSRCLSAEEA 306


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 224/675 (33%), Positives = 355/675 (52%), Gaps = 16/675 (2%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H  +LK G  +D F  N LIN+Y +      A+KLFD M  R+ +TW  LI GY  +G  
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEAC--SLLEDRIFGEQIHAFAIKSGFEN-NVFVG 197
           E   G+  +M       N       + AC  S+L  R  G Q+H +AI++G  +  V VG
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRK-GRQVHGYAIRTGLNDAKVAVG 141

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
             LI+MY   G    A +VF  +  KD    N MI   ++    E A   +  +  +   
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+++   + +S C     +  G+Q HG  +K G+  ++SV N ++ +Y +     E +++
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261

Query: 318 FDAISERNLISWTALISGYVRSGHG-GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           F  + ER+ +SW  +I     SG    +AI  FLE +  G   +      ++   S  S 
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY-TAEFNAILS 435
            +L  Q+H   +K+    D  +  AL+  Y K G++++   +    S +     +N+++S
Sbjct: 322 SKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G++      +   +V    QR  G   D  TF+ +LS  A+ A L  G  +HA +I+   
Sbjct: 382 GYIHNELLCKAMDLVWLMMQR--GQRLDCFTFATVLSACATVATLECGMEVHACAIRACL 439

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +DV++G+AL+ MY+KCG ID A + F  +  R++ SWN+M+S YA HG G  AL LF  
Sbjct: 440 ESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTR 499

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           MK  G  PD I+ +GVL AC + GL + G   F  + ++YGL P +EH++CMVDLLGRAG
Sbjct: 500 MKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAG 559

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL---ASKRLLDLEPKDAGSFIL 672
            L +  N IN  P   + L+WRT++       N + + L   A++ L +++P++A +++L
Sbjct: 560 ELDKIENFINKMPIKPNILIWRTVLGAC-CRGNGRKTELGRRAAEMLFNMDPQNAVNYVL 618

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SNMYA  G  ++ A+ R  M +  + KEAGCSW+ +   +H FVA    HPE   IY+K
Sbjct: 619 LSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAK 678

Query: 733 LDLLNDEMKLKVKDS 747
           L     E+  K++D+
Sbjct: 679 L----KELDKKIRDA 689



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 158/349 (45%), Gaps = 13/349 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G + LGQ  H   +K G   D   +N L+ LYA+ +RL   QK+F  ML R  ++W ++I
Sbjct: 218 GCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVI 277

Query: 132 KGYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
               D G      + +  +M R+    N  T   +L   S L       QIHA  +K   
Sbjct: 278 GALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNV 337

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFHVFV 249
           +++  +  +L++ Y  SG     E +F  ++  +D    N MI  Y        A  +  
Sbjct: 338 KDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVW 397

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            ++      + +TF  V+S C     +E G ++H  A++  +  ++ +G+A+V MY K G
Sbjct: 398 LMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCG 457

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             + A R F+ +  RNL SW ++ISGY R GHG  A+  F      G   D      V+ 
Sbjct: 458 RIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLS 517

Query: 370 GCSVCSNLELGLQLHGFAI------KHGYLSDVRLGTALVDIYAKGGDL 412
            CS      +GL   GF         +G +  V   + +VD+  + G+L
Sbjct: 518 ACS-----HIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGEL 561


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 208/664 (31%), Positives = 360/664 (54%), Gaps = 2/664 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            +LG+ +H  ++K G  ++T+  N L+ LY++  +L  A+++F  M  R  +++ SLI G
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            +  G  +  L +   M R   K +  T + +L AC+ +     G Q+H+ AIK+G   +
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + +  SL+ +Y        A   F     +++   N M++ Y +      +F +F  +  
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               PN +T+ +++  C     +  G+Q+H   +K G    + V + ++ MY K+G    
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLAL 516

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A R+   + E +++SWTA+I+GYV+     +A+  F E    GI  D+   A+ I  C+ 
Sbjct: 517 ALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L  G Q+H  +   G+ +D+ +  AL+ +YA+ G ++ A +  +    K    +N++
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSL 636

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SG  +  +   E+ + +F +      E +  T+   +S +AS A + +G+ +H+  +KT
Sbjct: 637 VSGLAQ--SGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT 694

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY ++  V N+LI++YAK GSI  A++ F  +S+R+++SWNAM++ Y+ HG G  AL LF
Sbjct: 695 GYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLF 754

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           EEMK  G  P+ ++ +GVL AC + GL + G+  F  + +I+ L P  EH+ C+VDLLGR
Sbjct: 755 EEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGR 814

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AG+L  AM  I   P     ++WRTL+S   +  N +    A+  LL+LEP+D+ +++L+
Sbjct: 815 AGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLI 874

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+YA           R  M D  + KE G SWIE+ + +H F A  K HP + +IY  +
Sbjct: 875 SNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYI 934

Query: 734 DLLN 737
             LN
Sbjct: 935 GHLN 938



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 284/592 (47%), Gaps = 19/592 (3%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           + ++  L++  + SG L     +H  + KSG   +    ++L++ Y +      A K+FD
Sbjct: 58  YQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFD 117

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
               RS  +W  +I  ++       V  +   M       N +T + +L+AC +  D  F
Sbjct: 118 ENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC-VGGDIAF 176

Query: 178 G--EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
              +Q+H+     GF+++  V   LI +Y  +G    A+ VF  +  KD+     MI   
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
           ++ G  E A  +F  + +S+  P  Y  ++V+S   +    E G+QLH L +K+G   E 
Sbjct: 237 SQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V N +V +Y +      AER+F  ++ R+ +S+ +LISG V+ G   +A+  F +    
Sbjct: 297 YVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD 356

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            +  D   +A+++  C+    L  G+QLH  AIK G  +D+ L  +L+D+Y+K  D+++A
Sbjct: 357 CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETA 416

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
                    +    +N +L  + +   D+  D   +F Q ++ GM P+  T+  +L    
Sbjct: 417 HKFFLXTETENIVLWNVMLVAYGQ--LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S   L  G  +H + IKTG+  +V V + LI MYAK G +  A +I + + + D+VSW A
Sbjct: 475 SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++ Y  H +   AL LFEEM+  G   D+I     + AC        GI    + +QI+
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC-------AGIRALRQGQQIH 587

Query: 596 ------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
                 G    L     ++ L  R GR+ EA  L       ++ + W +LVS
Sbjct: 588 AQSYAAGFGADLSINNALISLYARCGRIQEAY-LAFEKIGDKNNISWNSLVS 638



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 251/497 (50%), Gaps = 5/497 (1%)

Query: 64  LVKISIGSGDLKLG--QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           ++K  +G GD+     + VH+     G  +    AN LI+LY+K   ++ A+K+F+ + +
Sbjct: 165 VLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           +  +TW ++I G   +G  E  + + CDM+ SE     +  S +L A + ++    GEQ+
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL 283

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   IK GF +  +V   L+++Y  S     AE +F  +  +D    N +I    + G S
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFS 343

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  +F  +     +P+  T  +++S C     + +G QLH  A+K G+  +I +  ++
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSL 403

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + +Y K    E A + F      N++ W  ++  Y +  +   +   F +    G+  + 
Sbjct: 404 LDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQ 463

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
               +++  C+    L LG Q+H   IK G+  +V + + L+D+YAK G L  A  +L  
Sbjct: 464 FTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR 523

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
                   + A+++G+++   D   + + LF +    G++ D + F+  +S  A    L 
Sbjct: 524 LPEDDVVSWTAMIAGYVQH--DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALR 581

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           +G+ +HA S   G+ AD+ + NALI++YA+CG I  A+  F+ I D++ +SWN+++S  A
Sbjct: 582 QGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLA 641

Query: 542 LHGLGKGALLLFEEMKR 558
             G  + AL +F  M R
Sbjct: 642 QSGYFEEALQVFVRMLR 658



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 183/356 (51%), Gaps = 1/356 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++     G L LG+ +H  ++K+G Q + +  + LI++YAK+ +L +A ++   + 
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               ++WT++I GY+    +   L +  +M     +F+    +  + AC+ +     G+Q
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA +  +GF  ++ +  +LIS+Y   G  +EA   F  +  K+    N ++    ++G 
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGY 645

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VFV +L ++ E N +T+ + IS       +++G+Q+H + +K G   E  V N+
Sbjct: 646 FEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNS 705

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++++Y K G   +A R F+ +SERN+ISW A+I+GY + G G +A+  F E    GI  +
Sbjct: 706 LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPN 765

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSA 415
                 V+  CS    ++ GL       K H  +        +VD+  + G L  A
Sbjct: 766 HVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRA 821


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 208/664 (31%), Positives = 360/664 (54%), Gaps = 2/664 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            +LG+ +H  ++K G  ++T+  N L+ LY++  +L  A+++F  M  R  +++ SLI G
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            +  G  +  L +   M R   K +  T + +L AC+ +     G Q+H+ AIK+G   +
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + +  SL+ +Y        A   F     +++   N M++ Y +      +F +F  +  
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               PN +T+ +++  C     +  G+Q+H   +K G    + V + ++ MY K+G    
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLAL 516

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A R+   + E +++SWTA+I+GYV+     +A+  F E    GI  D+   A+ I  C+ 
Sbjct: 517 ALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L  G Q+H  +   G+ +D+ +  AL+ +YA+ G ++ A +  +    K    +N++
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSL 636

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SG  +  +   E+ + +F +      E +  T+   +S +AS A + +G+ +H+  +KT
Sbjct: 637 VSGLAQ--SGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT 694

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY ++  V N+LI++YAK GSI  A++ F  +S+R+++SWNAM++ Y+ HG G  AL LF
Sbjct: 695 GYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLF 754

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           EEMK  G  P+ ++ +GVL AC + GL + G+  F  + +I+ L P  EH+ C+VDLLGR
Sbjct: 755 EEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGR 814

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AG+L  AM  I   P     ++WRTL+S   +  N +    A+  LL+LEP+D+ +++L+
Sbjct: 815 AGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLI 874

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+YA           R  M D  + KE G SWIE+ + +H F A  K HP + +IY  +
Sbjct: 875 SNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYI 934

Query: 734 DLLN 737
             LN
Sbjct: 935 GHLN 938



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 284/592 (47%), Gaps = 19/592 (3%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           + ++  L++  + SG L     +H  + KSG   +    ++L++ Y +      A K+FD
Sbjct: 58  YQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFD 117

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
               RS  +W  +I  ++       V  +   M       N +T + +L+AC +  D  F
Sbjct: 118 ENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC-VGGDIAF 176

Query: 178 G--EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
              +Q+H+     GF+++  V   LI +Y  +G    A+ VF  +  KD+     MI   
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
           ++ G  E A  +F  + +S+  P  Y  ++V+S   +    E G+QLH L +K+G   E 
Sbjct: 237 SQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V N +V +Y +      AER+F  ++ R+ +S+ +LISG V+ G   +A+  F +    
Sbjct: 297 YVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD 356

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            +  D   +A+++  C+    L  G+QLH  AIK G  +D+ L  +L+D+Y+K  D+++A
Sbjct: 357 CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETA 416

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
                    +    +N +L  + +   D+  D   +F Q ++ GM P+  T+  +L    
Sbjct: 417 HKFFLTTETENIVLWNVMLVAYGQ--LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S   L  G  +H + IKTG+  +V V + LI MYAK G +  A +I + + + D+VSW A
Sbjct: 475 SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++ Y  H +   AL LFEEM+  G   D+I     + AC        GI    + +QI+
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC-------AGIRALRQGQQIH 587

Query: 596 ------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
                 G    L     ++ L  R GR+ EA  L       ++ + W +LVS
Sbjct: 588 AQSYAAGFGADLSINNALISLYARCGRIQEAY-LAFEKIGDKNNISWNSLVS 638



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 251/497 (50%), Gaps = 5/497 (1%)

Query: 64  LVKISIGSGDLKLG--QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           ++K  +G GD+     + VH+     G  +    AN LI+LY+K   ++ A+K+F+ + +
Sbjct: 165 VLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           +  +TW ++I G   +G  E  + + CDM+ SE     +  S +L A + ++    GEQ+
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL 283

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   IK GF +  +V   L+++Y  S     AE +F  +  +D    N +I    + G S
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFS 343

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  +F  +     +P+  T  +++S C     + +G QLH  A+K G+  +I +  ++
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSL 403

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + +Y K    E A + F      N++ W  ++  Y +  +   +   F +    G+  + 
Sbjct: 404 LDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQ 463

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
               +++  C+    L LG Q+H   IK G+  +V + + L+D+YAK G L  A  +L  
Sbjct: 464 FTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR 523

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
                   + A+++G+++   D   + + LF +    G++ D + F+  +S  A    L 
Sbjct: 524 LPEDDVVSWTAMIAGYVQH--DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALR 581

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           +G+ +HA S   G+ AD+ + NALI++YA+CG I  A+  F+ I D++ +SWN+++S  A
Sbjct: 582 QGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLA 641

Query: 542 LHGLGKGALLLFEEMKR 558
             G  + AL +F  M R
Sbjct: 642 QSGYFEEALQVFVRMLR 658



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 183/356 (51%), Gaps = 1/356 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++     G L LG+ +H  ++K+G Q + +  + LI++YAK+ +L +A ++   + 
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               ++WT++I GY+    +   L +  +M     +F+    +  + AC+ +     G+Q
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA +  +GF  ++ +  +LIS+Y   G  +EA   F  +  K+    N ++    ++G 
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGY 645

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  VFV +L ++ E N +T+ + IS       +++G+Q+H + +K G   E  V N+
Sbjct: 646 FEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNS 705

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++++Y K G   +A R F+ +SERN+ISW A+I+GY + G G +A+  F E    GI  +
Sbjct: 706 LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPN 765

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSA 415
                 V+  CS    ++ GL       K H  +        +VD+  + G L  A
Sbjct: 766 HVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRA 821


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 202/620 (32%), Positives = 338/620 (54%), Gaps = 8/620 (1%)

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI  Y+ +        I   M  ++ + +      +L+AC L+   + G+++H F +K+G
Sbjct: 95  LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F  +VFV  +LI MY   G    A  +F  +  KDV   + MI  Y+++G  + A  +  
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE--ISVGNAIVTMYGK 307
            +     +P++    ++  V  E   ++ GK +H   ++ G   +  + +  A++ MY K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
                 A R+FD +S+ ++ISWTA+I+ Y+   +  + +  F++ L  G+  +   + ++
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C     LELG  LH F +++G+   + L TA +D+Y K GD++SAR + D F  K  
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDL 394

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             ++A++S + +    DE     +F      G+ P+  T   LL + A    L  G+ +H
Sbjct: 395 MMWSAMISSYAQNNCIDE--AFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIH 452

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           +Y  K G   D+I+  + + MYA CG ID A ++F   +DRDI  WNAM+S +A+HG G+
Sbjct: 453 SYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGE 512

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL LFEEM+  G  P+DI+ +G L AC +SGL + G  LF+++   +G  P +EH+ CM
Sbjct: 513 AALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCM 572

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VDLLGRAG L EA  LI S P   +  ++ + ++  KL  N K    A+K+ L LEP  +
Sbjct: 573 VDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKS 632

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
           G  +L+SN+YA      + A +R  M D  + KE G S IE++  LH F+   ++HP+++
Sbjct: 633 GYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAK 692

Query: 728 EIYSKLDLLNDEMKLKVKDS 747
           ++Y  +    DEM+ K++D+
Sbjct: 693 KVYEMI----DEMREKLEDA 708



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 232/486 (47%), Gaps = 6/486 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K         LGQ VH F++K+G   D F  N LI +Y++   L +A+ LFD +  
Sbjct: 128 PSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIEN 187

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           +  ++W+++I+ Y   G  +  L +  DM+    K +E     I    + L D   G+ +
Sbjct: 188 KDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAM 247

Query: 182 HAFAIKSGF--ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           HA+ +++G   ++ V + T+LI MY        A  VF GL+   +     MI  Y    
Sbjct: 248 HAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCN 307

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
                  +FV +L     PN+ T  +++  C     +E GK LH   ++ G    + +  
Sbjct: 308 NLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLAT 367

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A + MYGK G    A  +FD+   ++L+ W+A+IS Y ++    +A + F+     GI  
Sbjct: 368 AFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRP 427

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   + +++  C+   +LE+G  +H +  K G   D+ L T+ VD+YA  GD+ +A  L 
Sbjct: 428 NERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLF 487

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
              + +  + +NA++SGF   +    E  + LF +    G+ P+ +TF   L   +    
Sbjct: 488 AEATDRDISMWNAMISGF--AMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGL 545

Query: 480 LVRGRSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAML 537
           L  G+ L H    + G+   V     ++ +  + G +D A ++ K +  R +I  + + L
Sbjct: 546 LQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFL 605

Query: 538 SAYALH 543
           +A  LH
Sbjct: 606 AACKLH 611


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 212/691 (30%), Positives = 376/691 (54%), Gaps = 14/691 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  L+K  I + D +LG+ VHA L++   + D+   N+LI+LY+K      A+ +F+ M 
Sbjct: 65  FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124

Query: 121 ---VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
               R  ++W++++  Y ++G     + +  +        N++  + ++ ACS  +    
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184

Query: 178 GEQIHAFAIKSG-FENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEY 235
           G     F +K+G FE++V VG SLI M+      F  A  VF  ++  +V     MI   
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G    A   F+ ++ S FE + +T ++V S C E   +  GKQLH  A++ G+V ++
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV 304

Query: 296 SVGNAIVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYVRSGH-GGKAINGFLE 351
               ++V MY K    G  ++  ++FD + + +++SWTALI+GY+++ +   +AIN F E
Sbjct: 305 EC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362

Query: 352 FLDLG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
            +  G +  +    ++    C   S+  +G Q+ G A K G  S+  +  +++ ++ K  
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
            ++ A+   +  S K    +N  L G    +  + E    L S+     +     TF+ L
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNL--NFEQAFKLLSEITERELGVSAFTFASL 480

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           LS  A+   + +G  +H+  +K G + +  V NALI+MY+KCGSID A ++F  + +R++
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           +SW +M++ +A HG     L  F +M  EG  P++++ + +L AC + GL   G   FN 
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           + + + ++P +EH+ACMVDLL RAG L++A   IN+ PF    L+WRT +   ++ +N++
Sbjct: 601 MYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE 660

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
              LA++++L+L+P +  ++I +SN+YA  G  +E+ ++R  M +  L KE GCSWIE+ 
Sbjct: 661 LGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVG 720

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            K+H F      HP + +IY +LD L  E+K
Sbjct: 721 DKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 210/418 (50%), Gaps = 13/418 (3%)

Query: 130 LIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           LI  +L+ GD    +     M R      +  T S +L++C    D   G+ +HA  I+ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVF---RGLAYKDVRCVNFMILEYNKAGESEMAF 245
             E +  +  SLIS+Y  SG   +AE+VF   R    +DV   + M+  Y   G    A 
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR-EISVGNAIVTM 304
            VFV  L     PNDY +T VI  C  +  V  G+   G  +K G    ++ VG +++ M
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 305 YGKHGMS-EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           + K   S E A ++FD +SE N+++WT +I+  ++ G   +AI  FL+ +  G   D   
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK---GGDLKSARMLLD 420
           L++V   C+   NL LG QLH +AI+ G + DV    +LVD+YAK    G +   R + D
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFD 329

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG-MEPDPVTFSRLLSLSASQAC 479
                    + A+++G+M K  +   + + LFS+    G +EP+  TFS       + + 
Sbjct: 330 RMEDHSVMSWTALITGYM-KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
              G+ +   + K G A++  V N++I+M+ K   ++ A + F+ +S++++VS+N  L
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFL 446


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 215/678 (31%), Positives = 355/678 (52%), Gaps = 7/678 (1%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           V+  +  GDL   +     L       +    N +I  Y K   L  A+ LFD M+ RS 
Sbjct: 49  VQTHLQRGDLGAARK----LFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSV 104

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           +TWT LI GY     +     +  DM R     +  T + +L   +  E      Q+H  
Sbjct: 105 VTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGH 164

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +K G+++ + V  SL+  Y  +     A ++F+ +A KD    N ++  Y+K G +  A
Sbjct: 165 VVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDA 224

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            ++F  +    F P+++TF  V++   +   +E G+Q+H   VK   V  + V NA++  
Sbjct: 225 INLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDF 284

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y KH    EA ++F  + E + IS+  LI+    +G   +++  F E             
Sbjct: 285 YSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPF 344

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           AT++   +   NLE+G Q+H  AI    +S+V +G +LVD+YAK      A  +    + 
Sbjct: 345 ATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAH 404

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           + +  + A++SG+++K     ED + LF +   A +  D  T++ +L   A+ A L  G+
Sbjct: 405 QSSVPWTALISGYVQK--GLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGK 462

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            LH+  I++G  ++V  G+AL+ MYAKCGSI  A Q+F+ +  R+ VSWNA++SAYA +G
Sbjct: 463 QLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNG 522

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
            G  AL  FE+M   G  P+ +S L +L AC + GL E G+  FN + Q+Y L P  EH+
Sbjct: 523 DGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHY 582

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
           A MVD+L R+GR  EA  L+   PF    ++W ++++  ++  N + +I A+ +L +++ 
Sbjct: 583 ASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKG 642

Query: 665 -KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
            +DA  ++ +SN+YA  G  D   KV+  + +  + K    SW+EI  K H F A+   H
Sbjct: 643 LRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSH 702

Query: 724 PESEEIYSKLDLLNDEMK 741
           P+++EI  KLD L  +M+
Sbjct: 703 PQTKEITRKLDELEKQME 720



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 150/273 (54%), Gaps = 2/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ I+  S +L++G+ +H+  + + + ++    N+L+++YAK ++   A ++F  +  +S
Sbjct: 347 LLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQS 406

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           ++ WT+LI GY+  G +E  L +  +M+R++   +  T + IL AC+ L     G+Q+H+
Sbjct: 407 SVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHS 466

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+SG  +NVF G++L+ MY   G  +EA  +F+ +  ++    N +I  Y + G+   
Sbjct: 467 RIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGH 526

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIV 302
           A   F  ++ S  +PN  +F +++  C     VEEG Q  + +   + +        ++V
Sbjct: 527 ALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMV 586

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
            M  + G  +EAE++   +  E + I W+++++
Sbjct: 587 DMLCRSGRFDEAEKLMARMPFEPDEIMWSSILN 619


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 220/691 (31%), Positives = 360/691 (52%), Gaps = 20/691 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K   G  D+ LG++VH   +K G   D F  N +I LY K   LD A +LFD M 
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH---------TCSVILEACSL 171
            ++ I+W SLI+G+ ++G +        + YR+     E          T   +L  CS 
Sbjct: 273 EQNLISWNSLIRGFSENGFW-------LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
             +   G  IH  A+K G  + + V  +LI MY   GC  EA  +FR +  K V   N M
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385

Query: 232 ILEYNKAGESEMAFHVFVHLLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
           I  Y++ G     F +   +   +   E N+ T  N++  C E   +   + LHG +++ 
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRH 445

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
               +  + NA +  Y K G    AE +F  ++ +++ SW A+I G+ ++G   KA++ +
Sbjct: 446 SFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFY 505

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
            E   LGI  D   + +++  C     L+ G ++HGF +++G   +  +  +L+ +Y   
Sbjct: 506 FEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHC 565

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
                 R   +    K +  +NA+LSG+ +    +E   + LF Q    G+EPD +  + 
Sbjct: 566 SKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNE--ALSLFRQMLSDGLEPDEIAIAS 623

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +L   +  + L  G+ +H +++K     D  V  +L+ MYAK G +  + +IF  ++ ++
Sbjct: 624 ILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKE 683

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           + SWN M++ + +HG G  A+ LFE+MKR    PD  + LGVLQAC ++GL   G+    
Sbjct: 684 VASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLA 743

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
           +++ +Y L P LEH+AC++D+LGRAGRL+EA+N IN  P      +W +L+S S    + 
Sbjct: 744 QMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDL 803

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +     +++LL LE   A S+IL+SN+YA  G  D    VR  M DL L K+ GCSWIE+
Sbjct: 804 EMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIEL 863

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
             K++ F+A    +P S+EI    + L  ++
Sbjct: 864 RGKVYSFIAGENSNPSSDEIRKMWNRLEKQI 894



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 236/427 (55%), Gaps = 8/427 (1%)

Query: 164 VILEACSLLEDRIFGEQI-HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           ++L+ C   ++   G ++     + S F  +  + T LI+MY   G   E+  VF  L  
Sbjct: 112 MLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQ 281
           K++   N ++  Y +    + A H F+ L+S ++F+P+++TF  +I  C     +  GK 
Sbjct: 172 KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS 231

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HG+AVK G++ ++ VGNA++ +YGK G  +EA  +FD + E+NLISW +LI G+  +G 
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291

Query: 342 GGKAINGFLEFLDL--GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
             +A   F   L+   G+  D + + T++  CS   N+++G+ +HG A+K G + ++ + 
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVC 351

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK--IADDEEDVMVLFSQQRL 457
            AL+D+Y+K G L  A +L      K    +N+++  +  +  + +  + +  ++ ++ L
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
             ME + VT   LL     ++ L+  R+LH YS++  +    ++ NA I  YAKCGS+  
Sbjct: 412 --MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVF 469

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F G++ + + SWNA++  +A +G    AL  + EM R G  PDD SI+ +L AC  
Sbjct: 470 AEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGR 529

Query: 578 SGLSEGG 584
            GL + G
Sbjct: 530 LGLLQYG 536



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 272/566 (48%), Gaps = 23/566 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANN-LINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           ++++G+ +   L  S   +  F  N  LI +Y+       ++ +FD +L ++   W +L+
Sbjct: 122 NVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALV 181

Query: 132 KGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GY+ +  Y+  +    ++   +E + +  T   +++AC+   D   G+ +H  A+K G 
Sbjct: 182 SGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGL 241

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             ++FVG ++I++Y   G   EA  +F  +  +++   N +I  +++ G    A+  F  
Sbjct: 242 IMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRS 301

Query: 251 LLSS--DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           LL S     P+  T   ++ VC     V+ G  +HG+AVK G+V E+ V NA++ MY K 
Sbjct: 302 LLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKC 361

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL------EFLDLGICCDSS 362
           G   EA  +F  I  ++++SW ++I  Y R G   +  +         E +++    +  
Sbjct: 362 GCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV----NEV 417

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +  ++  C   S L     LHG++++H +     +  A +  YAK G L  A  +  G 
Sbjct: 418 TILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGM 477

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
           + K  + +NA++ G  +   D  + +   F   RL G+ PD  +   LL        L  
Sbjct: 478 NTKSVSSWNAVIGGHAQN-GDPIKALDFYFEMTRL-GILPDDFSIVSLLLACGRLGLLQY 535

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +H + ++ G   +  V  +L+++Y  C         F+ + D++ V WNAMLS Y+ 
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQ 595

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           + L   AL LF +M  +G  PD+I+I  +L AC  S LS  G  L  E+        ++E
Sbjct: 596 NELPNEALSLFRQMLSDGLEPDEIAIASILGAC--SQLSALG--LGKEVHCFALKNSLME 651

Query: 603 H--FAC-MVDLLGRAGRLSEAMNLIN 625
               AC ++D+  ++G L  +  + N
Sbjct: 652 DNFVACSLMDMYAKSGFLGHSQRIFN 677


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 205/633 (32%), Positives = 333/633 (52%), Gaps = 5/633 (0%)

Query: 112  AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
            A K+F      +   W   +  +L  G   + +     + RS    +  T  +IL A   
Sbjct: 847  AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906

Query: 172  LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
             +D   GEQIHA  IKS F   V V  SL++MY  +G    AE  F      D+   N M
Sbjct: 907  ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966

Query: 232  ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY---ENLGVEEGKQLHGLAVK 288
            I  Y +      A   F  LL    +P+ +T  +V+  C    E      G Q+H  A+K
Sbjct: 967  ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026

Query: 289  FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
             G++ +  V  A++ +Y K G  +EAE +     + +L SW A++ GY++S    KA+  
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086

Query: 349  FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
            F    ++GI  D   LAT I       NL+ G Q+  +AIK G+ +D+ + + ++D+Y K
Sbjct: 1087 FSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146

Query: 409  GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
             GD+ +A  L    S      +  ++SG++E    DE+  + ++   R++G++PD  TF+
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIEN--GDEDHALSVYHLMRVSGVQPDEYTFA 1204

Query: 469  RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
             L+  S+    L +G+ +HA  +K  Y+ D  VG +L+ MY KCGS+  A+++F+ +  R
Sbjct: 1205 TLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR 1264

Query: 529  DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
             +V WNAML   A HG    AL LF  M+  G  PD ++ +GVL AC +SGL       F
Sbjct: 1265 KVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYF 1324

Query: 589  NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
            + + + YG+ P +EH++C+VD LGRAGR+ EA N+I S PF  S  ++R L+   +   +
Sbjct: 1325 DAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGD 1384

Query: 649  SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            ++ +   + +LL L+P D+ +++L+SN+YA     D+    R  M    + K+ G SWI+
Sbjct: 1385 AETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWID 1444

Query: 709  IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            + +K+H FV   + HP++  IY K++ L   ++
Sbjct: 1445 VKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIR 1477



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 163/678 (24%), Positives = 283/678 (41%), Gaps = 81/678 (11%)

Query: 66   KISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
            + +I   DLKLG+  HA ++ SG   D +  NNLI +Y+K   L  A+++FD    R  +
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 126  TWTSLIKGY--LDDGDYESVL------GIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            TW S++  Y    D  YE+VL      G+  +   S  +        +      ++    
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQ---V 735

Query: 178  GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             E +H +A+K GFE ++FV  +L+++Y   G   +A  +F  +  +D    N M+  Y +
Sbjct: 736  SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 238  AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREIS 296
                + A   F     S F P+   F+N+  V    N  V   ++ H   VK        
Sbjct: 796  NSFQDEALRFFSAFHRSGFXPD---FSNLHCVIGGVNSDVSNNRKRHAEQVK-------- 844

Query: 297  VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
                             A +MF      N+ +W   ++ ++ +G    AI+ F   L   
Sbjct: 845  ---------------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 357  ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
            I  DS  L  ++       +L+LG Q+H   IK  +   V +  +L+++Y+K G + +A 
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 417  MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL---SL 473
                         +N ++S + +   + E + +  F      G++PD  T + +L   S 
Sbjct: 950  KTFINSPELDLISWNTMISSYAQN--NLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007

Query: 474  SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
                     G  +H Y+IK G   D  V  ALI +Y+K G +D A  +  G  D D+ SW
Sbjct: 1008 GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASW 1067

Query: 534  NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN--EI 591
            NA++  Y      + AL  F  M   G   D+I++   ++A   SG      CL N  + 
Sbjct: 1068 NAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA---SG------CLINLKQG 1118

Query: 592  EQIY------GLRPILEHFACMVDLLGRAGRLSEAMNLIN--SSPFSESPLLWRTLVS-- 641
            +QI       G    L   + ++D+  + G +  A+ L    S P     + W T++S  
Sbjct: 1119 KQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRP---DEVAWTTMISGY 1175

Query: 642  VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
            +     +   S+    R+  ++P +     L+              K  + +  L   K+
Sbjct: 1176 IENGDEDHALSVYHLMRVSGVQPDEYTFATLI--------------KASSCLTALEQGKQ 1221

Query: 702  AGCSWIEIDSKLHHFVAS 719
               + +++D  L HFV +
Sbjct: 1222 IHANVVKLDYSLDHFVGT 1239



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 180/398 (45%), Gaps = 4/398 (1%)

Query: 76   LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
            LG  VH + +K G  ND+F +  LI+LY+K  ++D A+ L  G       +W +++ GY+
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075

Query: 136  DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
                    L     M+      +E T +  ++A   L +   G+QI A+AIK GF N+++
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLW 1135

Query: 196  VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
            V + ++ MY   G    A  +F  ++  D      MI  Y + G+ + A  V+  +  S 
Sbjct: 1136 VSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSG 1195

Query: 256  FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             +P++YTF  +I        +E+GKQ+H   VK     +  VG ++V MY K G  ++A 
Sbjct: 1196 VQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAY 1255

Query: 316  RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            R+F  +  R ++ W A++ G  + GH  +A+N F      GI  D      V+  CS   
Sbjct: 1256 RVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSG 1315

Query: 376  NLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
                  +      K +G   ++   + LVD   + G ++ A  ++     K +A     L
Sbjct: 1316 LFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRAL 1375

Query: 435  SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             G      D E    V     +L  ++P   +   LLS
Sbjct: 1376 LGACRTKGDAETAKRV---ADKLLALDPSDSSAYVLLS 1410



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 131/246 (53%), Gaps = 1/246 (0%)

Query: 73   DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
            +LK G+ + A+ +K G  ND + ++ ++++Y K   +  A +LF  +     + WT++I 
Sbjct: 1114 NLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS 1173

Query: 133  GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            GY+++GD +  L +   M  S  + +E+T + +++A S L     G+QIHA  +K  +  
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233

Query: 193  NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            + FVGTSL+ MY   G  ++A  VFR +  + V   N M+L   + G  + A ++F  + 
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293

Query: 253  SSDFEPNDYTFTNVISVC-YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            S+  +P+  TF  V+S C +  L  E  K    +   +G+  EI   + +V   G+ G  
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353

Query: 312  EEAERM 317
            +EAE +
Sbjct: 1354 QEAENV 1359



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 17/238 (7%)

Query: 40   VAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNL 99
            V +L  +S V   E T     +  L+K S     L+ G+ +HA ++K     D F   +L
Sbjct: 1187 VYHLMRVSGVQPDEYT-----FATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSL 1241

Query: 100  INLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
            +++Y K   +  A ++F  M VR  + W +++ G    G  +  L +   M  +  + ++
Sbjct: 1242 VDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDK 1301

Query: 160  HTCSVILEACS---LLED--RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
             T   +L ACS   L  +  + F      + I    E+     + L+     +G  +EAE
Sbjct: 1302 VTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHY----SCLVDALGRAGRIQEAE 1357

Query: 215  NVFRGLAYKDVRCVNFMILEYNKA-GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
            NV   + +K    +   +L   +  G++E A  V   LL+ D  P+D +   ++S  Y
Sbjct: 1358 NVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALD--PSDSSAYVLLSNIY 1413


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 205/633 (32%), Positives = 333/633 (52%), Gaps = 5/633 (0%)

Query: 112  AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
            A K+F      +   W   +  +L  G   + +     + RS    +  T  +IL A   
Sbjct: 847  AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906

Query: 172  LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
             +D   GEQIHA  IKS F   V V  SL++MY  +G    AE  F      D+   N M
Sbjct: 907  ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966

Query: 232  ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY---ENLGVEEGKQLHGLAVK 288
            I  Y +      A   F  LL    +P+ +T  +V+  C    E      G Q+H  A+K
Sbjct: 967  ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026

Query: 289  FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
             G++ +  V  A++ +Y K G  +EAE +     + +L SW A++ GY++S    KA+  
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086

Query: 349  FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
            F    ++GI  D   LAT I       NL+ G Q+  +AIK G+ +D+ + + ++D+Y K
Sbjct: 1087 FSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146

Query: 409  GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
             GD+ +A  L    S      +  ++SG++E    DE+  + ++   R++G++PD  TF+
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIEN--GDEDHALSVYHLMRVSGVQPDEYTFA 1204

Query: 469  RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
             L+  S+    L +G+ +HA  +K  Y+ D  VG +L+ MY KCGS+  A+++F+ +  R
Sbjct: 1205 TLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR 1264

Query: 529  DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
             +V WNAML   A HG    AL LF  M+  G  PD ++ +GVL AC +SGL       F
Sbjct: 1265 KVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYF 1324

Query: 589  NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
            + + + YG+ P +EH++C+VD LGRAGR+ EA N+I S PF  S  ++R L+   +   +
Sbjct: 1325 DAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGD 1384

Query: 649  SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            ++ +   + +LL L+P D+ +++L+SN+YA     D+    R  M    + K+ G SWI+
Sbjct: 1385 AETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWID 1444

Query: 709  IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            + +K+H FV   + HP++  IY K++ L   ++
Sbjct: 1445 VKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIR 1477



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 163/678 (24%), Positives = 283/678 (41%), Gaps = 81/678 (11%)

Query: 66   KISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
            + +I   DLKLG+  HA ++ SG   D +  NNLI +Y+K   L  A+++FD    R  +
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 126  TWTSLIKGY--LDDGDYESVL------GIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            TW S++  Y    D  YE+VL      G+  +   S  +        +      ++    
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQ---V 735

Query: 178  GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             E +H +A+K GFE ++FV  +L+++Y   G   +A  +F  +  +D    N M+  Y +
Sbjct: 736  SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 238  AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREIS 296
                + A   F     S F P+   F+N+  V    N  V   ++ H   VK        
Sbjct: 796  NSFQDEALRFFSAFHRSGFFPD---FSNLHCVIGGVNSDVSNNRKRHAEQVK-------- 844

Query: 297  VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
                             A +MF      N+ +W   ++ ++ +G    AI+ F   L   
Sbjct: 845  ---------------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 357  ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
            I  DS  L  ++       +L+LG Q+H   IK  +   V +  +L+++Y+K G + +A 
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 417  MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL---SL 473
                         +N ++S + +   + E + +  F      G++PD  T + +L   S 
Sbjct: 950  KTFINSPELDLISWNTMISSYAQN--NLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007

Query: 474  SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
                     G  +H Y+IK G   D  V  ALI +Y+K G +D A  +  G  D D+ SW
Sbjct: 1008 GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASW 1067

Query: 534  NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN--EI 591
            NA++  Y      + AL  F  M   G   D+I++   ++A   SG      CL N  + 
Sbjct: 1068 NAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA---SG------CLINLKQG 1118

Query: 592  EQIY------GLRPILEHFACMVDLLGRAGRLSEAMNLIN--SSPFSESPLLWRTLVS-- 641
            +QI       G    L   + ++D+  + G +  A+ L    S P     + W T++S  
Sbjct: 1119 KQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRP---DEVAWTTMISGY 1175

Query: 642  VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
            +     +   S+    R+  ++P +     L+              K  + +  L   K+
Sbjct: 1176 IENGDEDHALSVYHLMRVSGVQPDEYTFATLI--------------KASSCLTALEQGKQ 1221

Query: 702  AGCSWIEIDSKLHHFVAS 719
               + +++D  L HFV +
Sbjct: 1222 IHANVVKLDYSLDHFVGT 1239



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 180/398 (45%), Gaps = 4/398 (1%)

Query: 76   LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
            LG  VH + +K G  ND+F +  LI+LY+K  ++D A+ L  G       +W +++ GY+
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075

Query: 136  DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
                    L     M+      +E T +  ++A   L +   G+QI A+AIK GF N+++
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLW 1135

Query: 196  VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
            V + ++ MY   G    A  +F  ++  D      MI  Y + G+ + A  V+  +  S 
Sbjct: 1136 VSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSG 1195

Query: 256  FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             +P++YTF  +I        +E+GKQ+H   VK     +  VG ++V MY K G  ++A 
Sbjct: 1196 VQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAY 1255

Query: 316  RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            R+F  +  R ++ W A++ G  + GH  +A+N F      GI  D      V+  CS   
Sbjct: 1256 RVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSG 1315

Query: 376  NLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
                  +      K +G   ++   + LVD   + G ++ A  ++     K +A     L
Sbjct: 1316 LFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRAL 1375

Query: 435  SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             G      D E    V     +L  ++P   +   LLS
Sbjct: 1376 LGACRTKGDAETAKRV---ADKLLALDPSDSSAYVLLS 1410



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 131/246 (53%), Gaps = 1/246 (0%)

Query: 73   DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
            +LK G+ + A+ +K G  ND + ++ ++++Y K   +  A +LF  +     + WT++I 
Sbjct: 1114 NLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS 1173

Query: 133  GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            GY+++GD +  L +   M  S  + +E+T + +++A S L     G+QIHA  +K  +  
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233

Query: 193  NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            + FVGTSL+ MY   G  ++A  VFR +  + V   N M+L   + G  + A ++F  + 
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293

Query: 253  SSDFEPNDYTFTNVISVC-YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            S+  +P+  TF  V+S C +  L  E  K    +   +G+  EI   + +V   G+ G  
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353

Query: 312  EEAERM 317
            +EAE +
Sbjct: 1354 QEAENV 1359



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 17/238 (7%)

Query: 40   VAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNL 99
            V +L  +S V   E T     +  L+K S     L+ G+ +HA ++K     D F   +L
Sbjct: 1187 VYHLMRVSGVQPDEYT-----FATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSL 1241

Query: 100  INLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
            +++Y K   +  A ++F  M VR  + W +++ G    G  +  L +   M  +  + ++
Sbjct: 1242 VDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDK 1301

Query: 160  HTCSVILEACS---LLED--RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
             T   +L ACS   L  +  + F      + I    E+     + L+     +G  +EAE
Sbjct: 1302 VTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHY----SCLVDALGRAGRIQEAE 1357

Query: 215  NVFRGLAYKDVRCVNFMILEYNKA-GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
            NV   + +K    +   +L   +  G++E A  V   LL+ D  P+D +   ++S  Y
Sbjct: 1358 NVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALD--PSDSSAYVLLSNIY 1413


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 207/655 (31%), Positives = 342/655 (52%), Gaps = 4/655 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L   ++GS DL     VHA  +K     D + +++L+  Y     +DVA++      VRS
Sbjct: 168 LKACTVGS-DLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRS 226

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W +L+  Y  DGDY  V+ +   +  S ++ +++T   +L+ C  L     G+ +H 
Sbjct: 227 DVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHG 286

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             IK G E +  +   LI MY       +A  VF  +   DV   + MI  +++   +  
Sbjct: 287 LVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPE 346

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           AF +F+ +     +PN YTF  +  V      V   + +H   VK G  R   V +AIV 
Sbjct: 347 AFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVG 406

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  ++A   FD +   ++ SW  L+SG+    +    +  F E +  G+  +   
Sbjct: 407 MYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYT 466

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
              ++  C+   +L  G Q+H   +K G+  D  +   L+D+Y + G   +AR++ D   
Sbjct: 467 YVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLK 526

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +  ++S + +   D+ E  +  F         P+  T +  LS+ +  ACL  G
Sbjct: 527 ERDVFSWTVVMSTYAK--TDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSG 584

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             LH+Y+IK+G+ + V V +AL+ MY KCG++  A  +F      D+V WN ++  YA H
Sbjct: 585 LQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQH 643

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G  AL  F+EM  EG  PD+I+ +GVL AC ++GL + G   F  +  +YG+ P LEH
Sbjct: 644 GHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEH 703

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           +ACMVD+L +AG+L+EA +LIN  P +    LW+T++   ++  N + +  A+++L + +
Sbjct: 704 YACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQ 763

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           P D  S IL+SN+YA     ++ AK+R+ + D  + KE GCSWIEI+ KLH F++
Sbjct: 764 PDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLS 818



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 158/616 (25%), Positives = 287/616 (46%), Gaps = 6/616 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+A+HA LL+SG + D F  ++L+N+Y K  RL  A+ +FDGM  R  + WT+++  
Sbjct: 76  LRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSA 135

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               GD  + L +  +M       N    +  L+AC++  D  F  Q+HA A+K     +
Sbjct: 136 ITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFD 195

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            +V +SL+  Y   G    AE        +     N ++ EY + G+      VF  L+ 
Sbjct: 196 PYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVE 255

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           S  E + YT   V+  C E    + G+ +HGL +K G+  +  + N ++ MY K   +E+
Sbjct: 256 SGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAED 315

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F  I E +++  + +IS + R     +A + F++  D+G+  +      +    S 
Sbjct: 316 AYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASR 375

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             ++ L   +H   +K G+     +  A+V +Y K G ++ A +  D       A +N +
Sbjct: 376 TGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTL 435

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           LSGF     ++ E  + +F +    G+  +  T+  +L    S   L  G  +HA  +K+
Sbjct: 436 LSGFYS--GNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKS 493

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+  D  V   L+ MY + G    A  +F  + +RD+ SW  ++S YA    G+ A+  F
Sbjct: 494 GFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECF 553

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
             M RE   P+D ++   L  C        G+ L +   +      ++   + +VD+  +
Sbjct: 554 RSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSVVS--SALVDMYVK 611

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL-EPKDAGSFIL 672
            G L++A  L + S  +   + W T++       +   ++ A + ++D     D  +F+ 
Sbjct: 612 CGNLADAEMLFDESD-THDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVG 670

Query: 673 VSNMYAGQGMLDEAAK 688
           V +  +  G+LDE  +
Sbjct: 671 VLSACSHAGLLDEGRR 686



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 227/526 (43%), Gaps = 18/526 (3%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K  +  G  K GQAVH  ++K G + D    N LI +Y+K    + A ++F   + 
Sbjct: 266 PTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVF-ARID 324

Query: 122 RSAITWTSLIKGYLDDGDY-ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
              +   SL+    D  D       I   M     K N++T   +    S   D      
Sbjct: 325 EPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRS 384

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA  +KSGF     V  +++ MY  +G  ++A   F  +   D+   N ++  +     
Sbjct: 385 IHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNN 444

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E    +F  L+      N YT+  ++  C   + +  G Q+H   +K G   +  V   
Sbjct: 445 CEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKM 504

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY + G    A  +FD + ER++ SWT ++S Y ++  G KAI  F   L      +
Sbjct: 505 LLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPN 564

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            + LAT +  CS  + L  GLQLH + IK G+ S V + +ALVD+Y K G+L  A ML D
Sbjct: 565 DATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFD 623

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                   E+N I+ G+ +         +  F +    G  PD +TF  +LS  +    L
Sbjct: 624 ESDTHDLVEWNTIICGYAQH--GHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLL 681

Query: 481 VRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
             GR      S   G    +     ++ + AK G +  A  +   +    D   W  +L 
Sbjct: 682 DEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILG 741

Query: 539 AYALHG----LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           A  +HG      + A  LFE        PDDIS   +L + IY+ L
Sbjct: 742 ACRMHGNIEIAERAAEKLFESQ------PDDISSC-ILLSNIYADL 780



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 188/410 (45%), Gaps = 2/410 (0%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L+ C+       G+ +HA  ++SG   + F+  SL++MY   G   +A +VF G+ ++DV
Sbjct: 67  LQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDV 126

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
                M+     AG++  A  +F  +      PN +     +  C     +    Q+H  
Sbjct: 127 VAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQ 186

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
           AVK   + +  V +++V  Y   G  + AER       R+ +SW AL++ Y R G   K 
Sbjct: 187 AVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKV 246

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +  F + ++ G       L TV+  C      + G  +HG  IK G  +D  L   L+++
Sbjct: 247 MLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEM 306

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           Y+K    + A  +            + ++S F     D   +   +F Q    G++P+  
Sbjct: 307 YSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRH--DMAPEAFDIFMQMSDMGVKPNQY 364

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           TF  L  +++    +   RS+HA+ +K+G++    V +A++ MY K G++  A   F  +
Sbjct: 365 TFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLM 424

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
              DI SWN +LS +      +  L +F+E+  EG   +  + +G+L+ C
Sbjct: 425 QGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCC 474



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 154/311 (49%), Gaps = 4/311 (1%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           ++   +  C  +  +  GK LH   ++ G   +  + ++++ MY K G   +A  +FD +
Sbjct: 62  SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
             R++++WTA++S    +G  G A+  F E  + G+  +   LA  +  C+V S+L    
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA-RMLLDGFSCKYTAEFNAILSGFMEK 440
           Q+H  A+K   L D  + ++LV+ Y   G++  A R LLD    +    +NA+L+ +   
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDS-PVRSDVSWNALLNEYARD 240

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
              D   VM++F +   +G E    T   +L           G+++H   IK G   D +
Sbjct: 241 --GDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRV 298

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           + N LI MY+KC S + A+++F  I + D+V  + M+S +  H +   A  +F +M   G
Sbjct: 299 LNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMG 358

Query: 561 FAPDDISILGV 571
             P+  + +G+
Sbjct: 359 VKPNQYTFVGL 369



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 63/110 (57%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           +++  L   A+   L RG++LHA  +++G   D  + ++L+ MY KCG +  A  +F G+
Sbjct: 62  SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             RD+V+W AM+SA    G    AL LF EM  EG  P+  ++   L+AC
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKAC 171


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 220/691 (31%), Positives = 360/691 (52%), Gaps = 20/691 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K   G  D+ LG++VH   +K G   D F  N +I LY K   LD A +LFD M 
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH---------TCSVILEACSL 171
            ++ I+W SLI+G+ ++G +        + YR+     E          T   +L  CS 
Sbjct: 273 EQNLISWNSLIRGFSENGFW-------LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
             +   G  IH  A+K G  + + V  +LI MY   GC  EA  +FR +  K V   N M
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385

Query: 232 ILEYNKAGESEMAFHVFVHLLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
           I  Y++ G     F +   +   +   E N+ T  N++  C E   +   + LHG +++ 
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRH 445

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
               +  + NA +  Y K G    AE +F  ++ +++ SW A+I G+ ++G   KA++ +
Sbjct: 446 SFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFY 505

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
            E   LGI  D   + +++  C     L+ G ++HGF +++G   +  +  +L+ +Y   
Sbjct: 506 FEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHC 565

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
                 R   +    K +  +NA+LSG+ +    +E   + LF Q    G+EPD +  + 
Sbjct: 566 SKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNE--ALSLFRQMLSDGLEPDEIAIAS 623

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +L   +  + L  G+ +H +++K     D  V  +L+ MYAK G +  + +IF  ++ ++
Sbjct: 624 ILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKE 683

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           + SWN M++ + +HG G  A+ LFE+MKR    PD  + LGVLQAC ++GL   G+    
Sbjct: 684 VASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLA 743

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
           +++ +Y L P LEH+AC++D+LGRAGRL+EA+N IN  P      +W +L+S S    + 
Sbjct: 744 QMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDL 803

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +     +++LL LE   A S+IL+SN+YA  G  D    VR  M DL L K+ GCSWIE+
Sbjct: 804 EMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIEL 863

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
             K++ F+A    +P S+EI    + L  ++
Sbjct: 864 RGKVYSFIAGENSNPSSDEIRKMWNRLEKQI 894



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 236/427 (55%), Gaps = 8/427 (1%)

Query: 164 VILEACSLLEDRIFGEQI-HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           ++L+ C   ++   G ++     + S F  +  + T LI+MY   G   E+  VF  L  
Sbjct: 112 MLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQ 281
           K++   N ++  Y +    + A H F+ L+S ++F+P+++TF  +I  C     +  GK 
Sbjct: 172 KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS 231

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HG+AVK G++ ++ VGNA++ +YGK G  +EA  +FD + E+NLISW +LI G+  +G 
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291

Query: 342 GGKAINGFLEFLDL--GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
             +A   F   L+   G+  D + + T++  CS   N+++G+ +HG A+K G + ++ + 
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVC 351

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK--IADDEEDVMVLFSQQRL 457
            AL+D+Y+K G L  A +L      K    +N+++  +  +  + +  + +  ++ ++ L
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
             ME + VT   LL     ++ L+  R+LH YS++  +    ++ NA I  YAKCGS+  
Sbjct: 412 --MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVF 469

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F G++ + + SWNA++  +A +G    AL  + EM R G  PDD SI+ +L AC  
Sbjct: 470 AEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGR 529

Query: 578 SGLSEGG 584
            GL + G
Sbjct: 530 LGLLQYG 536



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 272/566 (48%), Gaps = 23/566 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANN-LINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           ++++G+ +   L  S   +  F  N  LI +Y+       ++ +FD +L ++   W +L+
Sbjct: 122 NVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALV 181

Query: 132 KGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GY+ +  Y+  +    ++   +E + +  T   +++AC+   D   G+ +H  A+K G 
Sbjct: 182 SGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGL 241

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             ++FVG ++I++Y   G   EA  +F  +  +++   N +I  +++ G    A+  F  
Sbjct: 242 IMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRS 301

Query: 251 LLSS--DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           LL S     P+  T   ++ VC     V+ G  +HG+AVK G+V E+ V NA++ MY K 
Sbjct: 302 LLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKC 361

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL------EFLDLGICCDSS 362
           G   EA  +F  I  ++++SW ++I  Y R G   +  +         E +++    +  
Sbjct: 362 GCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV----NEV 417

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +  ++  C   S L     LHG++++H +     +  A +  YAK G L  A  +  G 
Sbjct: 418 TILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGM 477

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
           + K  + +NA++ G  +   D  + +   F   RL G+ PD  +   LL        L  
Sbjct: 478 NTKSVSSWNAVIGGHAQN-GDPIKALDFYFEMTRL-GILPDDFSIVSLLLACGRLGLLQY 535

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +H + ++ G   +  V  +L+++Y  C         F+ + D++ V WNAMLS Y+ 
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQ 595

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           + L   AL LF +M  +G  PD+I+I  +L AC  S LS  G  L  E+        ++E
Sbjct: 596 NELPNEALSLFRQMLSDGLEPDEIAIASILGAC--SQLSALG--LGKEVHCFALKNSLME 651

Query: 603 H--FAC-MVDLLGRAGRLSEAMNLIN 625
               AC ++D+  ++G L  +  + N
Sbjct: 652 DNFVACSLMDMYAKSGFLGHSQRIFN 677


>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 827

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 251/855 (29%), Positives = 404/855 (47%), Gaps = 139/855 (16%)

Query: 1   MHTLLPANLLQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFND 60
           MHTL+   L  PP    Q+ PP       +     P +   Y   + S            
Sbjct: 1   MHTLVSDPLTLPPLPKHQTKPP-----NFSLLHTPPLTSTTYSTILQS------------ 43

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
                     S  L LG+ +H+  +K+G  N  F    L+ +Y+  +  + A  +FD M 
Sbjct: 44  ----------SNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMT 93

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGI----ACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           +++  +WT++++ +L+ G +     +     CD     EK +     V+L  C  L D  
Sbjct: 94  LKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGL--GEKLDFFVFPVVLNICCGLGDLE 151

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G Q+H   +K GF  NV+VG +LI MY   G   EA+ V  G+  KD    N +I    
Sbjct: 152 LGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACV 211

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVI----SVCYENLGVE--------------- 277
             G    A  +  ++L S+ EPN  T++ VI    S  Y+   VE               
Sbjct: 212 ANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDAR 271

Query: 278 ----------------EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
                            GK+LHG  V+  +     V NA+V MY + G  + A ++F   
Sbjct: 272 TLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKF 331

Query: 322 SERNLISWTALISGYVRSGHGGKA----------------------INGFLE-------- 351
           + +   S+  +I GY+ +G+ GKA                      I+G ++        
Sbjct: 332 ARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDAL 391

Query: 352 --FLDL---GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
             F DL   GI  DS  L +++ G +  + +  G ++H  AI  G  S+  +G ALV++Y
Sbjct: 392 MLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMY 451

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGF------------MEKIADD--EEDV---- 448
            K  D+ +A+M  D  S + T+ +NA++SG+            +E++  D  E +V    
Sbjct: 452 CKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWN 511

Query: 449 ---------------MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
                          M LF++ +++ + PD  T   +L+  +  A + RG+ +HAYSI+ 
Sbjct: 512 SILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRA 571

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           GY +D  +G  L+ MYAKCGSI   +Q++  IS+ ++V  NAML+AYA+HG G+  +++F
Sbjct: 572 GYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIF 631

Query: 554 EEMKREGFAPDDISILGVLQACIYSG-LSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
             M      PD ++ L VL +C+++G +  G  C +  + + Y + P L+H+ CMVDLL 
Sbjct: 632 RRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFY--LMETYNITPTLKHYTCMVDLLS 689

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG+L EA  LI + P     + W  L+    +        +A+++L++LEP + G+++L
Sbjct: 690 RAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVL 749

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           ++N+YA  G   + AK R  MND  + K  GCSWIE    +H F+AS K H   EEIY  
Sbjct: 750 LANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFM 809

Query: 733 LDLLNDEMKLKVKDS 747
           LD L   +++K   S
Sbjct: 810 LDNLTKFIRIKEHKS 824


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 215/672 (31%), Positives = 363/672 (54%), Gaps = 12/672 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +H+ + K+G  +DTF A  L +LYAK   L  A+K+FD     +   W S ++ Y  +  
Sbjct: 23  LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82

Query: 140 YESVLGI----ACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-FENNV 194
           +E  L +     C    + + F   T  + L+AC+ L     G+ IH FA K+    +++
Sbjct: 83  WEETLRLFHLMICTAGEAPDNF---TIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDM 139

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           FVG++L+ +Y   G   EA  VF      D      M+  Y +  + E A  +F  ++  
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199

Query: 255 DFEPND-YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           D    D  T  +V+S C + L V+ G  +HGL ++     ++ + N+++ +Y K G  + 
Sbjct: 200 DCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F  + E+++ISW+ +I+ Y  +    +A+N F E ++     +S  + + +  C+V
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             NLE G ++H  A+  G+  D  + TAL+D+Y K      A  L      K    + A+
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           LSG+ +     +   M +F      G++PD V   ++L+ S+      +   LH Y +++
Sbjct: 380 LSGYAQNGMAYKS--MGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS 437

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+ ++V VG +LI +Y+KCGS+  A ++FKG+  RD+V W++M++AY +HG G  AL +F
Sbjct: 438 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIF 497

Query: 554 EEM-KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           ++M K     P++++ L +L AC ++GL E G+ +F+ +   Y LRP  EHF  MVDLLG
Sbjct: 498 DQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLG 557

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           R G+L +AM++IN  P    P +W  L+   ++  N +    A+K L  L+P  AG +IL
Sbjct: 558 RIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYIL 617

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+YA  G  D  A++RT + +  L K  G S +E+   +H F+AS + HP+S++IY  
Sbjct: 618 LSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYEL 677

Query: 733 LDLLNDEMKLKV 744
           L  L  +M  +V
Sbjct: 678 LRKLEAQMGKEV 689



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 247/462 (53%), Gaps = 2/462 (0%)

Query: 280  KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
            K+ H     +G+  +  +      MY      + A  +F+ I       W  +I G+   
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 340  GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
            G    ++  + + ++ G+  D       +  C+  S+L+ G  +H   +  G  +D+ + 
Sbjct: 797  GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 400  TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
             ALVD+YAK GD+++AR++ D  + +    + +++SG+     + E   +  F   R +G
Sbjct: 857  AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSE--TLGFFDLMRSSG 914

Query: 460  MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
            + P+ V+   +L    +   L +G   H+Y I+TG+  D++V  A++ MY+KCGS+D A 
Sbjct: 915  VIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR 974

Query: 520  QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
             +F   + +D+V W+AM+++Y +HG G+ A+ LF++M + G  P  ++   VL AC +SG
Sbjct: 975  CLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 1034

Query: 580  LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
            L E G   F  + + + +   L ++ACMVDLLGRAG+LSEA++LI + P      +W +L
Sbjct: 1035 LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094

Query: 640  VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
            +   ++  N   +   +  L  L+P  AG  +L+SN+YA +   +E  KVR  M     +
Sbjct: 1095 LGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGAN 1154

Query: 700  KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            K  G S +E D+++H F    + HP+ E++Y+KL+ L   MK
Sbjct: 1155 KIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMK 1196



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 243/495 (49%), Gaps = 23/495 (4%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           P  +K   G   L+LG+ +H F  K+    +D F  + L+ LY+K  ++  A K+F+   
Sbjct: 107 PIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ 166

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGE 179
               + WTS++ GY  + D E  L +   M   +    +  T   ++ AC+ L +   G 
Sbjct: 167 RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGS 226

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            +H   I+  F+ ++ +  SL+++Y  +GC + A N+F  +  KDV   + MI  Y    
Sbjct: 227 CVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNE 286

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
            +  A ++F  ++   FEPN  T  + +  C  +  +EEGK++H +AV  G   + SV  
Sbjct: 287 AANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVST 346

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ MY K    +EA  +F  + +++++SW AL+SGY ++G   K++  F   L  GI  
Sbjct: 347 ALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQP 406

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D+  +  ++   S     +  L LHG+ ++ G+ S+V +G +L+++Y+K G L  A  L 
Sbjct: 407 DAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLF 466

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ-RLAGMEPDPVTFSRLLSLSASQA 478
            G   +    ++++++ +   I     + + +F Q  + + + P+ VTF  +LS + S A
Sbjct: 467 KGMIVRDVVIWSSMIAAY--GIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILS-ACSHA 523

Query: 479 CLVR------GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
            LV        R +H Y ++     D      ++ +  + G +  A  I   I+   I +
Sbjct: 524 GLVEEGLKIFDRMVHDYQLR----PDSEHFGIMVDLLGRIGQLGKAMDI---INRMPIPA 576

Query: 533 ----WNAMLSAYALH 543
               W A+L A  +H
Sbjct: 577 GPHVWGALLGACRIH 591



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 227/465 (48%), Gaps = 7/465 (1%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           Q+H+   K+G  ++ F  T L S+Y      + A  VF    + +V   N  +  Y +  
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 240 ESEMAFHVFVHLLSSDFE-PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISV 297
           + E    +F  ++ +  E P+++T    +  C     +E GK +HG A K   +  ++ V
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG- 356
           G+A+V +Y K G   EA ++F+     + + WT++++GY ++    +A+  F + + +  
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D   L +V+  C+   N++ G  +HG  I+  +  D+ L  +L+++YAK G  K A 
Sbjct: 202 VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAA 261

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            L      K    ++ +++ +    A +E   + LF +      EP+ VT    L   A 
Sbjct: 262 NLFSKMPEKDVISWSTMIACYANNEAANE--ALNLFHEMIEKRFEPNSVTVVSALQACAV 319

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L  G+ +H  ++  G+  D  V  ALI MY KC   D A  +F+ +  +D+VSW A+
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           LS YA +G+   ++ +F  M  +G  PD ++++ +L A    G+ +  +CL   + +  G
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVR-SG 438

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               +   A +++L  + G L +A+ L       +  ++W ++++
Sbjct: 439 FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDV-VIWSSMIA 482



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 168/381 (44%), Gaps = 20/381 (5%)

Query: 78   QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
            +  HA +   G Q D+        +Y  FNR+D A  +F+ +    +  W  +I+G+  D
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 138  GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
            G + S L +   M     K ++      L++C+ L D   G+ IH   +  G  N++FV 
Sbjct: 797  GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 198  TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
             +L+ MY   G    A  VF  +A +D+     MI  Y   G +      F  + SS   
Sbjct: 857  AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916

Query: 258  PNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN  +  +V+  C  NLG + +G+  H   ++ G   +I V  AI+ MY K G  + A  
Sbjct: 917  PNRVSILSVLLAC-GNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 317  MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            +FD  + ++L+ W+A+I+ Y   GHG KAI+ F + +  G+         V+  CS    
Sbjct: 976  LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035

Query: 377  LELG-----LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
            LE G     L    F I    LS+      +VD+  + G L  A  L++    +  A   
Sbjct: 1036 LEEGKMYFQLMTEEFVIARK-LSNY---ACMVDLLGRAGQLSEAVDLIENMPVEPDASIW 1091

Query: 432  AILSG---------FMEKIAD 443
              L G           EKIAD
Sbjct: 1092 GSLLGACRIHNNLDLAEKIAD 1112



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 137/275 (49%), Gaps = 2/275 (0%)

Query: 61   WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
            +P  +K   G  DL+ G+ +H  L+  G  ND F    L+++YAK   ++ A+ +FD M 
Sbjct: 821  FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880

Query: 121  VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            VR  ++WTS+I GY  +G     LG    M  S    N  +   +L AC  L     GE 
Sbjct: 881  VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940

Query: 181  IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
             H++ I++GFE ++ V T+++ MY   G    A  +F   A KD+ C + MI  Y   G 
Sbjct: 941  FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000

Query: 241  SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV-KFGVVREISVGN 299
               A  +F  ++ +   P+  TFT V+S C  +  +EEGK    L   +F + R++S   
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 1060

Query: 300  AIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
             +V + G+ G   EA  + + +  E +   W +L+
Sbjct: 1061 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 9/280 (3%)

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            ++D    C+N     QLH    K G L D    T L  +YAK   L++AR + D     
Sbjct: 6   VLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHP 65

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N+ L  +  +    EE + +       AG  PD  T    L   A    L  G+ 
Sbjct: 66  NVHLWNSTLRSYCRE-KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKV 124

Query: 486 LHAYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
           +H ++ K     +D+ VG+AL+ +Y+KCG +  A ++F+     D V W +M++ Y  + 
Sbjct: 125 IHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184

Query: 545 LGKGALLLFEEM-KREGFAPDDISILGVLQACIYSGLSEGGICLFNEI--EQIYGLRPIL 601
             + AL LF +M   +    D ++++ V+ AC      + G C+   +   +  G  P++
Sbjct: 185 DPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLV 244

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
                +++L  + G    A NL +  P  +  + W T+++
Sbjct: 245 N---SLLNLYAKTGCEKIAANLFSKMP-EKDVISWSTMIA 280



 Score = 42.7 bits (99), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           +C    +  HA     G   D  +      MY     ID A  +F+ I +     WN M+
Sbjct: 731 SCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMI 790

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             +A  G    +L L+ +M  +G  PD  +    L++C  +GLS+
Sbjct: 791 RGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSC--AGLSD 833


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 210/672 (31%), Positives = 361/672 (53%), Gaps = 4/672 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  L  G+ +H  +L S  + DT   N+++++Y K   L  A+++FD M  R+ +++TS+
Sbjct: 80  SRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 139

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY  +G     + +   M + +   ++     I++AC+   D   G+Q+HA  IK   
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG-ESEMAFHVFV 249
            +++    +LI+MY       +A  VF G+  KD+   + +I  +++ G E E   H+  
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 259

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            L    F PN+Y F + +  C   L  + G Q+HGL +K  +      G ++  MY + G
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCG 319

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A R+FD I   +  SW  +I+G   +G+  +A++ F +    G   D+  L +++ 
Sbjct: 320 FLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLC 379

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY-TA 428
             +    L  G+Q+H + IK G+L+D+ +  +L+ +Y    DL     L + F     + 
Sbjct: 380 AQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSV 439

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N IL+  ++   +   +++ LF    ++  EPD +T   LL      + L  G  +H 
Sbjct: 440 SWNTILTACLQH--EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC 497

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           YS+KTG A +  + N LI MYAKCGS+  A +IF  + +RD+VSW+ ++  YA  G G+ 
Sbjct: 498 YSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEE 557

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL+LF+EMK  G  P+ ++ +GVL AC + GL E G+ L+  ++  +G+ P  EH +C+V
Sbjct: 558 ALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVV 617

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLL RAGRL+EA   I+        ++W+TL+S  K   N   +  A++ +L ++P ++ 
Sbjct: 618 DLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNST 677

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           + +L+ +M+A  G  + AA +R++M    + K  G SWIEI+ K+H F A    HPE ++
Sbjct: 678 AHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDD 737

Query: 729 IYSKLDLLNDEM 740
           IY+ L  +  +M
Sbjct: 738 IYTVLHNIWSQM 749



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 255/539 (47%), Gaps = 25/539 (4%)

Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
           ACS       G +IH   + S  + +  +   ++SMY   G  R+A  VF  +  +++  
Sbjct: 76  ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 135

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
              +I  Y++ G+   A  +++ +L  D  P+ + F ++I  C  +  V  GKQLH   +
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           K      +   NA++ MY +     +A R+F  I  ++LISW+++I+G+ + G   +A++
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255

Query: 348 GFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
              E L  G+   +     + +  CS     + G Q+HG  IK     +   G +L D+Y
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
           A+ G L SAR + D      TA +N I++G       DE   + +FSQ R +G  PD ++
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE--AVSVFSQMRSSGFIPDAIS 373

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI- 525
              LL        L +G  +H+Y IK G+ AD+ V N+L+TMY  C  +   F +F+   
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGG 584
           ++ D VSWN +L+A   H      L LF+ M      PD I++  +L+ C+  S L  G 
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493

Query: 585 ICLFNEIEQIYGLRPILEHFA--CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
                 ++   GL P  E F    ++D+  + G L +A  + +S       +  R +VS 
Sbjct: 494 QVHCYSLKT--GLAP--EQFIKNGLIDMYAKCGSLGQARRIFDS-------MDNRDVVSW 542

Query: 643 SKLMANSKFSILASKRLLDL-EPKDAG------SFILVSNMYAGQGMLDEAAKVRTTMN 694
           S L+     S    + L+   E K AG      +F+ V    +  G+++E  K+  TM 
Sbjct: 543 STLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 236/485 (48%), Gaps = 6/485 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    S D+ LG+ +HA ++K  S +     N LI +Y +FN++  A ++F G+ ++ 
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233

Query: 124 AITWTSLIKGYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
            I+W+S+I G+   G ++E++  +   +       NE+     L+ACS L    +G QIH
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
              IKS    N   G SL  MY   G    A  VF  +   D    N +I      G ++
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  VF  + SS F P+  +  +++    + + + +G Q+H   +K+G + +++V N+++
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413

Query: 303 TMYGKHGMSEEAERMF-DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           TMY           +F D  +  + +SW  +++  ++     + +  F   L      D 
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             +  ++ GC   S+L+LG Q+H +++K G   +  +   L+D+YAK G L  AR + D 
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              +    ++ ++ G+ +  +   E+ ++LF + + AG+EP+ VTF  +L+  +    + 
Sbjct: 534 MDNRDVVSWSTLIVGYAQ--SGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE 591

Query: 482 RGRSLHA-YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
            G  L+A    + G +      + ++ + A+ G ++ A +    +  + D+V W  +LSA
Sbjct: 592 EGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651

Query: 540 YALHG 544
               G
Sbjct: 652 CKTQG 656



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 163/322 (50%), Gaps = 1/322 (0%)

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +S F+    T+ ++I  C  +  + +G+++H   +      +  + N I++MYGK G   
Sbjct: 60  NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLR 119

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A  +FD + ERNL+S+T++I+GY ++G G +AI  +L+ L   +  D     ++I  C+
Sbjct: 120 DAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             S++ LG QLH   IK    S +    AL+ +Y +   +  A  +  G   K    +++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I++GF  ++  + E +  L          P+   F   L   +S      G  +H   IK
Sbjct: 240 IIAGF-SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK 298

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +  A + I G +L  MYA+CG ++ A ++F  I   D  SWN +++  A +G    A+ +
Sbjct: 299 SELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSV 358

Query: 553 FEEMKREGFAPDDISILGVLQA 574
           F +M+  GF PD IS+  +L A
Sbjct: 359 FSQMRSSGFIPDAISLRSLLCA 380


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 210/667 (31%), Positives = 359/667 (53%), Gaps = 8/667 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +H+  LK G   D+F    L  LYA++  L  A KLF+    ++   W +L++ Y  +G 
Sbjct: 23  LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGK 82

Query: 140 YESVLGIACDMYR---SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +   L +   M     +EE+ + +T S+ L++CS L+    G+ IH F +K   ++++FV
Sbjct: 83  WVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMFV 141

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SD 255
           G++LI +Y   G   +A  VF      DV     +I  Y + G  E+A   F  ++    
Sbjct: 142 GSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQ 201

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P+  T  +  S C +      G+ +HG   + G   ++ + N+I+ +YGK G    A 
Sbjct: 202 VSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAA 261

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F  +  +++ISW+++++ Y  +G    A+N F E +D  I  +   + + +  C+  S
Sbjct: 262 NLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSS 321

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           NLE G Q+H  A+ +G+  D+ + TAL+D+Y K    ++A  L +    K    +  + S
Sbjct: 322 NLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFS 381

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+ E I    + + V F      G  PD +   ++L+ S+    + +   LHA+  K+G+
Sbjct: 382 GYAE-IGMAHKSLGV-FCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGF 439

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +  +G +LI +YAKC SID A ++FKG+   D+V+W+++++AY  HG G+ AL L  +
Sbjct: 440 DNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQ 499

Query: 556 MKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           M       P+D++ + +L AC ++GL E GI +F+ +   Y L P +EH+  MVDLLGR 
Sbjct: 500 MSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRM 559

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G L +A+++IN+ P    P +W  L+   ++  N K   LA+  L  L+P  AG + L+S
Sbjct: 560 GELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLS 619

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           N+Y       +AAK+RT + + RL K  G S +EI +++H F+AS + H ES++IY  L 
Sbjct: 620 NIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYEMLR 679

Query: 735 LLNDEMK 741
            L+  M+
Sbjct: 680 KLDARMR 686



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 223/477 (46%), Gaps = 5/477 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G   L+LG+ +H FL K    +D F  + LI LY+K  +++ A K+F        + WTS
Sbjct: 117 GLQKLELGKMIHGFL-KKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTS 175

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV-ILEACSLLEDRIFGEQIHAFAIKS 188
           +I GY  +G  E  L     M   E+   +    V    AC+ L D   G  +H F  + 
Sbjct: 176 IITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRR 235

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF+  + +  S++++Y  +G  R A N+FR + YKD+   + M+  Y   G    A ++F
Sbjct: 236 GFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLF 295

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             ++    E N  T  + +  C  +  +EEGKQ+H LAV +G   +I+V  A++ MY K 
Sbjct: 296 NEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKC 355

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              E A  +F+ + +++++SW  L SGY   G   K++  F   L  G   D+  L  ++
Sbjct: 356 FSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKIL 415

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
              S    ++  L LH F  K G+ ++  +G +L+++YAK   + +A  +  G       
Sbjct: 416 AASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVV 475

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLH 487
            +++I++ +       EE + +       + ++P+ VTF  +LS  +    +  G +  H
Sbjct: 476 TWSSIIAAYGFH-GQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFH 534

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
               +     ++     ++ +  + G +D A  +   +        W A+L A  +H
Sbjct: 535 VMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIH 591



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 24/288 (8%)

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L  +++ C  CS + +  QLH   +K G   D  + T L  +YA+   L  A  L +   
Sbjct: 7   LVKLLETC--CSKISIT-QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETP 63

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM---EPDPVTFSRLLSLSASQACL 480
           CK    +NA+L  +   +     + + LF Q     +    PD  T S  L   +    L
Sbjct: 64  CKTVYLWNALLRSYF--LEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKL 121

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H + +K    +D+ VG+ALI +Y+KCG ++ A ++F      D+V W ++++ Y
Sbjct: 122 ELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGY 180

Query: 541 ALHGLGKGALLLFEEM-KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL-- 597
             +G  + AL  F  M   E  +PD ++++    AC  + LS+     FN    ++G   
Sbjct: 181 EQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASAC--AQLSD-----FNLGRSVHGFVK 233

Query: 598 RPILEHFACM----VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           R   +   C+    ++L G+ G +  A NL    P+ +  + W ++V+
Sbjct: 234 RRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKD-IISWSSMVA 280


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 209/686 (30%), Positives = 370/686 (53%), Gaps = 22/686 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  D+ +G AVH  ++K+G   D F  N L++ Y     +  A KLFD M 
Sbjct: 190 FPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP 249

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ ++W S+I+ + D+GD  + +             +  T   +L  C+   +   G+ 
Sbjct: 250 ERNLVSWNSMIRVFSDNGDDGAFMP------------DVATVVTVLPVCAREREIGVGKG 297

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H +A+K   +  + V  +L+ MY   GC  +++ +F+    K+V   N M+  ++  G+
Sbjct: 298 VHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGD 357

Query: 241 SEMAFHVFVHLL--SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
               F +   +L  S D + ++ T  N + VC++   +   K+LH  ++K   V +  + 
Sbjct: 358 IHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLA 417

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA V  Y K G    A+R+F  I  + L SW ALI GY +S     +++  L+  + G+ 
Sbjct: 418 NAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLL 477

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D+  + +++  CS   +L LG ++HGF I++    D+ +  +++ +Y   G+L + ++L
Sbjct: 478 PDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVL 537

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D         +N +++G ++      E  + LF Q  L G++P  ++   +    +   
Sbjct: 538 FDAMEDNSLVSWNTVITGHLQN--GFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLP 595

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L  GR  HAY++K     +  +  ++I MYAK G+I  + ++F G+ ++   SWNAM+ 
Sbjct: 596 SLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIM 655

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            Y +HG  K A+ LFEEM+R G  PDD++ LGVL AC +SGL   G+   ++++  +GL+
Sbjct: 656 GYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLK 715

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL--LWRTLVSVSKLMANSKFSILAS 656
           P L+H+AC++D+LGRAG+L  A+ +  ++  SE P   +W +L+S  ++  N +     +
Sbjct: 716 PNLKHYACVIDMLGRAGQLDNALRV--AAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVA 773

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
            +L  LEP+   +++L+SN+YAG G  D+  +VR  M ++ L K+AGCSWIE++ K+  F
Sbjct: 774 AKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSF 833

Query: 717 VASGKDHPESEEIYSKLDLLNDEMKL 742
           V   +     EEI S   +L  EMK+
Sbjct: 834 VVGERFLDGFEEIKSLWSIL--EMKI 857



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 146/577 (25%), Positives = 269/577 (46%), Gaps = 41/577 (7%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGS---QNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           L++ S    D+++G+ +H   L SGS   ++D      +I +YA     D ++  FD + 
Sbjct: 90  LLQASGKRKDIEMGRKIHH--LVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALR 147

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLEDRIFGE 179
            ++   W ++I  Y  +  Y  VL +   M        ++ T   +++AC+ + D   G 
Sbjct: 148 SKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGL 207

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            +H   +K+G   ++FVG +L+S Y   G   +A  +F  +  +++   N MI  ++  G
Sbjct: 208 AVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG 267

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           +               F P+  T   V+ VC     +  GK +HG AVK  + +E+ V N
Sbjct: 268 D------------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNN 315

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ MY K G   +++ +F   + +N++SW  ++ G+   G     I+G  + L   +  
Sbjct: 316 ALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGD----IHGTFDLLRQMLAG 371

Query: 360 DSSCLA---TVIDGCSVC---SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
                A   T+++   VC   S L    +LH +++K  ++ D  L  A V  YAK G L 
Sbjct: 372 SEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLS 431

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            A+ +  G   K    +NA++ G+ +  + D    +    Q + +G+ PD  T   LLS 
Sbjct: 432 YAQRVFHGIRSKTLNSWNALIGGYAQ--SSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSA 489

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +    L  G+ +H + I+     D+ V  +++++Y  CG +     +F  + D  +VSW
Sbjct: 490 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSW 549

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIE 592
           N +++ +  +G  + AL LF +M   G  P  IS++ V  AC +   L  G         
Sbjct: 550 NTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLG------REA 603

Query: 593 QIYGLRPILEH---FAC-MVDLLGRAGRLSEAMNLIN 625
             Y L+ +LE     AC ++D+  + G ++++  + N
Sbjct: 604 HAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFN 640



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 213/419 (50%), Gaps = 24/419 (5%)

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           ++L+A    +D   G +IH     S    ++  + T +I+MY   G   ++ + F  L  
Sbjct: 89  LLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRS 148

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQ 281
           K++   N +I  Y++         +F+ ++S +   P+++TF  VI  C     V  G  
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HGL VK G+V ++ VGNA+V+ YG HG   +A ++FD + ERNL+SW ++I  +  +G 
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD 268

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
            G     F+         D + + TV+  C+    + +G  +HG+A+K     ++ +  A
Sbjct: 269 DG----AFMP--------DVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNA 316

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS--QQRLAG 459
           L+D+Y+K G +  ++M+    + K    +N ++ GF       E D+   F   +Q LAG
Sbjct: 317 LMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGF-----SAEGDIHGTFDLLRQMLAG 371

Query: 460 ME---PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
            E    D VT    + +   ++ L   + LH YS+K  +  D ++ NA +  YAKCGS+ 
Sbjct: 372 SEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLS 431

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            A ++F GI  + + SWNA++  YA     + +L    +MK  G  PD+ ++  +L AC
Sbjct: 432 YAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSAC 490


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1038

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 213/685 (31%), Positives = 358/685 (52%), Gaps = 6/685 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG+ +   ++KSG ++     N+LI+++     +D A  +F+ +  R  I+W S++ 
Sbjct: 276 DESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVA 335

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y  +G  E    I   M R  ++ N  T S +L     ++ + +G  IH   +K GF++
Sbjct: 336 AYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDS 395

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            V V  +L+ MY  +G   EA+ VF+ +  KD+   N ++  +   G S  A  +   ++
Sbjct: 396 VVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMI 455

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +    N  TFT+ ++ C+     ++G+ LHGL V  G+     +GNA+V+MYGK G   
Sbjct: 456 RTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMS 515

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            + R+   +  R++++W ALI GY  +    KA+  F      G+  +   + +V+  C 
Sbjct: 516 TSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACL 575

Query: 373 VCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           V  +L E G  LH + +  G+ SD  +  +L+ +YAK GDL S++ L +G   +    +N
Sbjct: 576 VPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWN 635

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           AIL+          E+V+ L S+ R  G+  D  +FS  LS +A  A L  G+ LH  ++
Sbjct: 636 AILAANAHH--GHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 693

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+  D  + NA   MY+KCG I    ++     +R + SWN ++SA   HG  +    
Sbjct: 694 KLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCE 753

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
            F EM   G  P  ++ + +L AC + GL + G+  ++ I + +GL P +EH  C++DLL
Sbjct: 754 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLL 813

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GR+GRL+EA   I+  P   + L+WR+L++  K+  +      A++ L  LEP+D   F+
Sbjct: 814 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFV 873

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L SNM+A  G  ++   VR  M    + K+  CSW+++  K+  F    + HP++ EIY+
Sbjct: 874 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 933

Query: 732 KLDLLNDEMKLK--VKDSSAFELQD 754
           KL+ +   +K    V D+S   LQD
Sbjct: 934 KLEDIKKLIKESGYVADTSQ-ALQD 957



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 171/577 (29%), Positives = 288/577 (49%), Gaps = 27/577 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH F+ KSG  +D + +  +++LY  +  +  ++K+F+ M  R+ ++WTSL+ GY D
Sbjct: 179 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 238

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G+ E V+ I   M     + NE++ S+++ +C LL+D   G QI    IKSG E+ + V
Sbjct: 239 KGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAV 298

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLISM+ + G    A  +F  ++ +D    N ++  Y + G  E +  +F  +     
Sbjct: 299 ENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHD 358

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E N  T + ++SV  +    + G+ +HGL VK G    + V N ++ MY   G SEEA+ 
Sbjct: 359 EVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADL 418

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  +  ++LISW +L++ +V  G    A+      +  G   +     + +  C     
Sbjct: 419 VFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEF 478

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
            + G  LHG  +  G   +  +G ALV +Y K G + ++R +L     +    +NA++ G
Sbjct: 479 FDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGG 538

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV------RGRSLHAYS 490
           + E   +D +  +  F   R+ G+  + +T   +LS     ACLV      RG+ LHAY 
Sbjct: 539 YAEN--EDPDKALAAFQTLRVEGVSANYITVVSVLS-----ACLVPGDLLERGKPLHAYI 591

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +  G+ +D  V N+LITMYAKCG +  +  +F G+ +R I++WNA+L+A A HG G+  L
Sbjct: 592 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVL 651

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH------F 604
            L  +M+  G + D  S    L A          + +  E +Q++GL   L        F
Sbjct: 652 KLVSKMRSFGLSLDQFSFSEGLSAA-------AKLAVLEEGQQLHGLAVKLGFELDCFIF 704

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               D+  + G + E + ++  S     P  W  L+S
Sbjct: 705 NAAADMYSKCGEIGEVVKMLPPSVNRSLP-SWNILIS 740



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 256/510 (50%), Gaps = 15/510 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+A+HA  +K   +      N LIN+Y KF R+  A+ LFD M VR+ ++W +++ G + 
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEAC----SLLEDRIFGEQIHAFAIKSGFEN 192
            G Y   +     M     K +    + ++ AC    S+  +   G Q+H F  KSG  +
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFRE---GVQVHGFVAKSGLLS 193

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +V+V T+++ +Y   G    +  VF  +  ++V     +++ Y+  GE E    ++  + 
Sbjct: 194 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMR 253

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               E N+ + + VIS C        G+Q+ G  +K G+  +++V N++++M+G  G  +
Sbjct: 254 GEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVD 313

Query: 313 EAERMFDAISERNLISWTALISGYVRSGH---GGKAINGFLEFLDLGICCDSSCLATVID 369
            A  +F+ ISER+ ISW ++++ Y ++GH     +  N    F D     +S+ ++T++ 
Sbjct: 314 YANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDE---VNSTTVSTLLS 370

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
                 + + G  +HG  +K G+ S V +   L+ +YA  G  + A ++      K    
Sbjct: 371 VLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLIS 430

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N++++ F+        D + +       G   + VTF+  L+   S     +GR LH  
Sbjct: 431 WNSLMASFVND--GRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGL 488

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            + +G   + I+GNAL++MY K G +  + ++   +  RD+V+WNA++  YA +     A
Sbjct: 489 VVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKA 548

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSG 579
           L  F+ ++ EG + + I+++ VL AC+  G
Sbjct: 549 LAAFQTLRVEGVSANYITVVSVLSACLVPG 578



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 219/471 (46%), Gaps = 19/471 (4%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G  +HA  +K     +V    +LI+MY   G  + A  +F  +  ++    N M+    +
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREIS 296
            G        F  +     +P+ +   ++++ C  +  +  EG Q+HG   K G++ ++ 
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V  AI+ +YG +G+   + ++F+ + +RN++SWT+L+ GY   G   + I+ +      G
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           + C+ + ++ VI  C +  +  LG Q+ G  IK G  S + +  +L+ ++   G++  A 
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            + +  S + T  +N+I++ + +    +E     +F+  R    E +  T S LLS+   
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESS--RIFNLMRRFHDEVNSTTVSTLLSVLGD 374

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
                 GR +H   +K G+ + V V N L+ MYA  G  + A  +FK +  +D++SWN++
Sbjct: 375 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSL 434

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI----- 591
           ++++   G    AL +   M R G + + ++    L AC      + G  L   +     
Sbjct: 435 MASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGL 494

Query: 592 --EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
              QI G          +V + G+ G +S +  ++   P     + W  L+
Sbjct: 495 FDNQIIG--------NALVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALI 536


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 213/682 (31%), Positives = 356/682 (52%), Gaps = 15/682 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEA--NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G ++  +AVH  +LKS  ++       N+  ++Y+K +    A  +FD M  R+  +WT 
Sbjct: 78  GSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTV 137

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G  + G +       C+M  S    ++   S I+++C  L+    G+ +HA  +  G
Sbjct: 138 MIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRG 197

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F  ++FV TSL++MY   G   ++  VF  +   +    N MI      G    AF +FV
Sbjct: 198 FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFV 257

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            + +    PN YT  +V     + + V  GK++   A + G+   + VG A++ MY K G
Sbjct: 258 RMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCG 317

Query: 310 MSEEAERMFDAISERNLIS------WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
              +A  +FD     N I+      W A+ISGY +SG   +A+  +++    GI  D   
Sbjct: 318 SLHDARSVFDT----NFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYT 373

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
             +V +  +   +L+ G  +HG  +K G  L  V +  A+ D Y+K G L+  R + D  
Sbjct: 374 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 433

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             +    +  +++ + +  +   E+ +  F   R  G  P+  TFS +L   AS   L  
Sbjct: 434 EERDIVSWTTLVTAYSQ--SSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEY 491

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           GR +H    K G   +  + +ALI MYAKCGSI  A ++F  IS+ DIVSW A++S YA 
Sbjct: 492 GRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQ 551

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HGL + AL LF  M+  G   + +++L VL AC + G+ E G+  F ++E  YG+ P +E
Sbjct: 552 HGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEME 611

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+AC++DLLGR GRL +AM  I   P   + ++W+TL+   ++  N +   +A++++L +
Sbjct: 612 HYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSI 671

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
            P+ + +++L+SN Y   G  ++   +R  M D  + KE G SWI +  ++H F +  + 
Sbjct: 672 RPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQ 731

Query: 723 HPESEEIYSKLDLLNDEMKLKV 744
           HP+ +EIY KL+ L +++K  V
Sbjct: 732 HPQKKEIYVKLEELREKIKAMV 753



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 244/493 (49%), Gaps = 15/493 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  +++  IG   L+LG+ VHA ++  G     F + +L+N+YAK   ++ +  +F+ M 
Sbjct: 170 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 229

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
             + ++W ++I G   +G +     +   M       N +T   + +A   L D   G++
Sbjct: 230 EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE 289

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC-----VNFMILEY 235
           +   A + G E NV VGT+LI MY   G   +A +VF       + C      N MI  Y
Sbjct: 290 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT---NFINCGVNTPWNAMISGY 346

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VRE 294
           +++G S+ A  ++V +  +    + YT+ +V +    +  ++ G+ +HG+ +K G+ +  
Sbjct: 347 SQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMV 406

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
           +SV NAI   Y K G  E+  ++FD + ER+++SWT L++ Y +S  G +A+  F    +
Sbjct: 407 VSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMRE 466

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G   +    ++V+  C+    LE G Q+HG   K G  ++  + +AL+D+YAK G +  
Sbjct: 467 EGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITE 526

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A  + D  S      + AI+SG+ +      ED + LF +  L+G++ + VT   +L  +
Sbjct: 527 AGKVFDKISNPDIVSWTAIISGYAQH--GLVEDALQLFRRMELSGIKANAVTLLCVL-FA 583

Query: 475 ASQACLVRGRSLHAYSIKTGYAA--DVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIV 531
            S   +V     +   ++ GY    ++     +I +  + G +D A +  + +  + + +
Sbjct: 584 CSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEM 643

Query: 532 SWNAMLSAYALHG 544
            W  +L    +HG
Sbjct: 644 VWQTLLGGCRVHG 656



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 20/321 (6%)

Query: 265 NVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +V+  C E   + E K +HGL +K  F     + + N    +Y K      A  +FD + 
Sbjct: 69  DVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP 128

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           +RN+ SWT +I G    G        F E L+ GI  D    + +I  C    +LELG  
Sbjct: 129 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 188

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H   +  G+ + + + T+L+++YAK G ++ +  + +  +      +NA++SG      
Sbjct: 189 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 248

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV---RGRSLHAYSIKTGYAADV 499
             E     LF + +     P+  T   L+S+S +   LV    G+ +   + + G   +V
Sbjct: 249 HLE--AFDLFVRMKNGACTPNMYT---LVSVSKAVGKLVDVNMGKEVQNCASELGIEGNV 303

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVS------WNAMLSAYALHGLGKGALLLF 553
           +VG ALI MY+KCGS+  A  +F    D + ++      WNAM+S Y+  G  + AL L+
Sbjct: 304 LVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCSQEALELY 359

Query: 554 EEMKREGFAPDDISILGVLQA 574
            +M + G   D  +   V  A
Sbjct: 360 VQMCQNGITSDLYTYCSVFNA 380


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 205/650 (31%), Positives = 350/650 (53%), Gaps = 3/650 (0%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD-YESVLGIA 147
           S ++  E N+ +    K  +L  A+ +FD M  R  I+WT+LI GY++  D YE+++  +
Sbjct: 53  SVHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFS 112

Query: 148 CDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
                   + ++   SV L+AC+L  +  FGE +H F++KSG  ++VFV ++LI MY   
Sbjct: 113 NMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKV 172

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
           G   +   VF  +  ++V     +I     AG +      F  +  S    + +TF   +
Sbjct: 173 GKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIAL 232

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
               ++  +  GK +H   +K G      V N + TMY K G  +   R+F+ +   +++
Sbjct: 233 KASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVV 292

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           SWT LIS YV+ G    A+  F       +  +    A VI  C+  +  + G Q+HG  
Sbjct: 293 SWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHV 352

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           ++ G ++ + +  +++ +Y+K G LKSA ++  G + K    ++ I+S + +      ++
Sbjct: 353 LRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQ--GGYAKE 410

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
                S  R  G +P+    S +LS+  S A L +G+ +HA+ +  G   + +V +A+I+
Sbjct: 411 AFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIIS 470

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY+KCGS+  A +IF G+   DI+SW AM++ YA HG  + A+ LFE++   G  PD + 
Sbjct: 471 MYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVM 530

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            +GVL AC ++G+ + G   F  +  +Y + P  EH+ C++DLL RAGRLSEA ++I S 
Sbjct: 531 FIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSM 590

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           PF    ++W TL+   ++  +       +++LL L+P  AG+ I ++N+YA +G   EAA
Sbjct: 591 PFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAA 650

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
            +R  M    + KE G SW+ ++ +L+ FVA  + HP+SE I + L LL+
Sbjct: 651 HIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLS 700



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 239/485 (49%), Gaps = 32/485 (6%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
            G+ +H F +KSG  +  F ++ LI++Y K  +++   ++F+ M+ R+ ++WT++I G +
Sbjct: 142 FGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLV 201

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEA---CSLLEDRIFGEQIHAFAIKSGFEN 192
             G     L    +M+RS+  ++ HT ++ L+A    SLL     G+ IH   IK GF+ 
Sbjct: 202 HAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHH---GKAIHTQTIKQGFDE 258

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           + FV  +L +MY   G       +F  +   DV     +I  Y + GE E A   F  + 
Sbjct: 259 SSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMR 318

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S   PN YTF  VIS C      + G+Q+HG  ++ G+V  +SV N+I+T+Y K G+ +
Sbjct: 319 KSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLK 378

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +F  I+ +++ISW+ +IS Y + G+  +A +        G   +   L++V+  C 
Sbjct: 379 SASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCG 438

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             + LE G Q+H   +  G   +  + +A++ +Y+K G ++ A  + +G        + A
Sbjct: 439 SMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTA 498

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++G+ E      ++ + LF +    G++PD V F  +L+     AC       HA  + 
Sbjct: 499 MINGYAEH--GYSQEAINLFEKISSVGLKPDYVMFIGVLT-----AC------NHAGMVD 545

Query: 493 TGYAADVIVGNA------------LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
            G+   +++ N             LI +  + G +  A  I + +    D V W+ +L A
Sbjct: 546 LGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRA 605

Query: 540 YALHG 544
             +HG
Sbjct: 606 CRVHG 610



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 169/317 (53%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K S  S  L  G+A+H   +K G    +F  N L  +Y K  + D   +LF+ M +   
Sbjct: 232 LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDV 291

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WT+LI  Y+  G+ E  +     M +S    N++T + ++ +C+ L    +GEQIH  
Sbjct: 292 VSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGH 351

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            ++ G  N + V  S+I++Y   G  + A  VF G+  KD+   + +I  Y++ G ++ A
Sbjct: 352 VLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEA 411

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F     +     +PN++  ++V+SVC     +E+GKQ+H   +  G+  E  V +AI++M
Sbjct: 412 FDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISM 471

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  +EA ++F+ +   ++ISWTA+I+GY   G+  +AIN F +   +G+  D    
Sbjct: 472 YSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMF 531

Query: 365 ATVIDGCSVCSNLELGL 381
             V+  C+    ++LG 
Sbjct: 532 IGVLTACNHAGMVDLGF 548


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 206/659 (31%), Positives = 354/659 (53%), Gaps = 5/659 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K    S  ++ G+ +H  + K G  +D F  N L+  Y     L   +++FD ML
Sbjct: 10  FPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEML 69

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            R  ++W S+I  +   G Y   + + C+M  RS  + N  +   +L  C+ LED + G 
Sbjct: 70  ERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGR 129

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           QIH + +K+G ++ V VG +L+ +Y   G  +++  VF  ++ ++    N +I       
Sbjct: 130 QIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLE 189

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
            ++ A  +F  ++    +PN  TF++++ V  E    + GK++HG +++FG+  +I V N
Sbjct: 190 RNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVAN 249

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ MY K G S +A  +F+ I E+N++SW A+++ + ++     A++   +    G   
Sbjct: 250 ALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIP 309

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +S     V+  C+    L  G ++H  AI+ G   D+ +  AL D+YAK G L  AR + 
Sbjct: 310 NSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF 369

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
              S +    +N ++ G+ +     E   + LF +  + GM+ D V++  ++S  A+ A 
Sbjct: 370 K-ISLRDEVSYNILIIGYSQTTNCSES--LRLFLEMGIKGMKLDVVSYMGVISACANLAA 426

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L +G+ +H  +++      + + NAL+  Y KCG ID A ++F+ I  RD  SWN+M+  
Sbjct: 427 LKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILG 486

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y + G    A+ LFE MK +G   D +S + VL AC + GL E G   F  + Q+  ++P
Sbjct: 487 YGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QVQNIKP 545

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
              H+ACMVDLLGRAG + EA+ LI S P      +W  L+   ++    + +  A++ L
Sbjct: 546 TQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHL 605

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
             L+P+ +G + ++SNMYA  G  DEA +VR  M      K  GCSW++ID+++H FVA
Sbjct: 606 FKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVA 664



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 184/329 (55%), Gaps = 7/329 (2%)

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +D+TF  V+  C ++L V++G+++HG+  K G   ++ VGN ++  YG  G  ++ +R+F
Sbjct: 6   DDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVF 65

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVCSNL 377
           D + ER+++SW ++I  +   G   +AI+ F E  L  G   +   + +V+  C+   + 
Sbjct: 66  DEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDG 125

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS-- 435
             G Q+H + +K G  S V +G ALVD+Y K G +K +R + D  S +    +NAI++  
Sbjct: 126 VTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSL 185

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
            ++E+     +D + +F      G++P+ VTFS +L +         G+ +H +S++ G 
Sbjct: 186 AYLER----NQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGL 241

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +D+ V NALI MYAK G    A  +F  I +++IVSWNAM++ +A + L   A+ L  +
Sbjct: 242 ESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQ 301

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGG 584
           M+ +G  P+ ++   VL AC   G    G
Sbjct: 302 MQADGEIPNSVTFTNVLPACARIGFLRPG 330



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 10/275 (3%)

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
           +G+  D      V+  C+   +++ G ++HG   K G+ SDV +G  L+  Y   G LK 
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL-AGMEPDPVTFSRLLSL 473
            + + D    +    +N+++  F   +     + + LF +  L +G  P+ V+   +L +
Sbjct: 61  VKRVFDEMLERDVVSWNSVIGVF--SVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPV 118

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            A     V GR +H Y +KTG  + V VGNAL+ +Y KCG +  + ++F  IS+R+ VSW
Sbjct: 119 CAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSW 178

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           NA++++ A     + AL +F  M   G  P+ ++   +L   +   L + G     EI  
Sbjct: 179 NAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFG----KEIHG 234

Query: 594 I---YGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
               +GL   +     ++D+  ++GR  +A N+ N
Sbjct: 235 FSLRFGLESDIFVANALIDMYAKSGRSLQASNVFN 269


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 213/670 (31%), Positives = 360/670 (53%), Gaps = 2/670 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  ++ L + VH      G   D F  ++LI LY     +  A+ LFD + 
Sbjct: 180 FPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELP 239

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           VR  I W  ++ GY+ +GD+ S LG   +M  S  K N  +   +L  C+       G Q
Sbjct: 240 VRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQ 299

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H   I+SGFE++  V  ++I+MY   G   +A  +F  +   D    N +I  Y + G 
Sbjct: 300 LHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGF 359

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           ++ A  +F  +++S  + +  TF + +    ++  ++  K++H   V+ GV  ++ + +A
Sbjct: 360 TDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSA 419

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V +Y K G  E A + F   +  ++   TA+ISGYV +G   +A+N F   +  G+  +
Sbjct: 420 LVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPN 479

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              +A+V+  C+  ++L+LG +LH   +K G  +  ++G+++  +YAK G L  A     
Sbjct: 480 CLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFR 539

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               K +  +N ++  F +      E  + LF Q   +G + D V+ S  LS  A+   L
Sbjct: 540 RMPVKDSVCWNLMIVSFSQN--GKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPAL 597

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ LH + ++  + +D  V + LI MY+KCG +  A  +F  +  ++ VSWN++++AY
Sbjct: 598 YYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAY 657

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG  +  L LF EM   G  PD ++ L ++ AC ++GL + GI  F  + + YG+   
Sbjct: 658 GNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICAR 717

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EHFACMVDL GRAGRL EA + I S PF+     W +L+   +L  N + + LASK L+
Sbjct: 718 MEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLV 777

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L+P ++G ++L+SN++AG G  +   KVR+ M +  + K  G SWI+++   H F A+ 
Sbjct: 778 ELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAAD 837

Query: 721 KDHPESEEIY 730
             HP+S EIY
Sbjct: 838 GCHPQSVEIY 847



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 254/507 (50%), Gaps = 3/507 (0%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA +L  G        + ++ +Y           LF  + +  ++ W  LI+G+   
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G ++  L     M  S    +++T   +++AC  L +    + +H  A   GF  ++F+G
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           +SLI +Y  +G   +A+ +F  L  +D    N M+  Y K G+   A   F  + +S  +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           PN  +F  ++SVC     V  G QLHGL ++ G   + +V N I+TMY K G   +A ++
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD + + + ++W  LI+GYV++G   +A+  F   +  G+  DS   A+ +       +L
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           +   ++H + ++HG   DV L +ALVDIY KGGD++ A       +    A   A++SG+
Sbjct: 396 KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGY 455

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           +    + E   + LF      GM P+ +T + +L   A+ A L  G+ LH   +K G   
Sbjct: 456 VLNGLNVE--ALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLEN 513

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
              VG+++  MYAK G +D A+Q F+ +  +D V WN M+ +++ +G  + A+ LF +M 
Sbjct: 514 VCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMG 573

Query: 558 REGFAPDDISILGVLQACI-YSGLSEG 583
             G   D +S+   L AC  Y  L  G
Sbjct: 574 TSGTKFDSVSLSATLSACANYPALYYG 600



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 234/471 (49%), Gaps = 6/471 (1%)

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVN 229
           SL++ ++   QIHA  +  G   ++ +G+ ++ MY     F++  N+F  L        N
Sbjct: 89  SLVKQQV--RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWN 146

Query: 230 FMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
           ++I  ++  G  + A   F  +L S+  P+ YTF  VI  C     V   K +H LA   
Sbjct: 147 WLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSM 206

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           G   ++ +G++++ +Y  +G   +A+ +FD +  R+ I W  +++GYV++G    A+  F
Sbjct: 207 GFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTF 266

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
            E  +  +  +S     ++  C+    +  G+QLHG  I+ G+ SD  +   ++ +Y+K 
Sbjct: 267 QEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKC 326

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G+L  AR + D      T  +N +++G+++    DE   + LF     +G++ D +TF+ 
Sbjct: 327 GNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDE--AVALFKAMVTSGVKLDSITFAS 384

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
            L        L   + +H+Y ++ G   DV + +AL+ +Y K G ++ A + F+  +  D
Sbjct: 385 FLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVD 444

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           +    AM+S Y L+GL   AL LF  + +EG  P+ +++  VL AC      + G  L  
Sbjct: 445 VAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHC 504

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           +I +  GL  + +  + +  +  ++GRL  A       P  +S + W  ++
Sbjct: 505 DILK-KGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDS-VCWNLMI 553



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 9/221 (4%)

Query: 468 SRLLSLSASQACLVRG--RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           S   +   S A LV+   R +HA  +  G    + +G+ ++ MY  C S      +F  +
Sbjct: 78  SMFRAFPNSDASLVKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRL 137

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
                + WN ++  +++ G    AL+ F  M     APD  +   V++AC   GL+   +
Sbjct: 138 QLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKAC--GGLNNVPL 195

Query: 586 C-LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--V 642
           C + +E+ +  G    L   + ++ L    G + +A  L +  P  +  +LW  +++  V
Sbjct: 196 CKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDC-ILWNVMLNGYV 254

Query: 643 SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
                NS        R   ++P    SF+ + ++ A +G++
Sbjct: 255 KNGDFNSALGTFQEMRNSCVKPNSV-SFVCLLSVCATRGIV 294


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 205/650 (31%), Positives = 353/650 (54%), Gaps = 3/650 (0%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD-YESVLGIA 147
           S ++  E N+ +    K  +L  ++ +FD M  R  I+WT+LI GY++  D YE+++  +
Sbjct: 86  SVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFS 145

Query: 148 CDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
               +   + ++   SV L+AC L  +  FGE +H F++KSG  N+VFV ++LI MY   
Sbjct: 146 NMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKV 205

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
           G   +   VF+ +  ++V     +I     AG +  A   F  +  S    + +TF   +
Sbjct: 206 GKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIAL 265

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
               ++  +  GK +H   +K G      V N + TMY K G ++   R+F+ +   +++
Sbjct: 266 KASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVV 325

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           SWT LI+ YV+ G    A+  F       +  +    A VI  C+  +  + G Q+HG  
Sbjct: 326 SWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHV 385

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           ++ G +  + +  ++V +Y+K G LKSA ++  G + K    ++ I++ + +      ++
Sbjct: 386 LRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQ--GGYAKE 443

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
                S  R  G +P+    S +LS+  S A L +G+ +HA+ +  G   + +V +ALI+
Sbjct: 444 AFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALIS 503

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY+KCGS++ A +IF G+   +I+SW AM++ YA HG  + A+ LFE++   G  PD ++
Sbjct: 504 MYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVT 563

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            +GVL AC ++G+ + G   F  +   Y + P  EH+ C++DLL RAGRLSEA ++I S 
Sbjct: 564 FIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSM 623

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           P     ++W TL+   ++  +       +++LL L+P  AG+ I ++N+YA +G   EAA
Sbjct: 624 PCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAA 683

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
            +R  M    + KE G SW+ ++ KL+ FVA  + HP+SE I + L+LL+
Sbjct: 684 HIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLS 733



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 239/483 (49%), Gaps = 28/483 (5%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
            G+ +H F +KSG  N  F ++ LI++Y K  +++   ++F  M  R+ ++WT++I G +
Sbjct: 175 FGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLV 234

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
             G     L    +M+ S+  ++ HT ++ L+A +       G+ IH   IK GF+ + F
Sbjct: 235 HAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSF 294

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  +L +MY   G       +F  +   DV     +I  Y + GE E A   F  +  S+
Sbjct: 295 VINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSN 354

Query: 256 FEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
             PN YTF  VIS C  NL + + G+Q+HG  ++ G+V  +SV N+IVT+Y K G+ + A
Sbjct: 355 VSPNKYTFAAVISAC-ANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSA 413

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
             +F  I+ +++ISW+ +I+ Y + G+  +A +        G   +   L++V+  C   
Sbjct: 414 SLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSM 473

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           + LE G Q+H   +  G   +  + +AL+ +Y+K G ++ A  + +G        + A++
Sbjct: 474 ALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMI 533

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G+ E      ++ + LF +    G++PD VTF  +L+     AC       HA  +  G
Sbjct: 534 NGYAEH--GYSQEAINLFEKISSVGLKPDYVTFIGVLT-----AC------SHAGMVDLG 580

Query: 495 YAADVIVGN------------ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYA 541
           +   +++ N             +I +  + G +  A  + + +    D V W+ +L +  
Sbjct: 581 FYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCR 640

Query: 542 LHG 544
           +HG
Sbjct: 641 VHG 643



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 186/364 (51%), Gaps = 2/364 (0%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K S  S  L  G+A+H   +K G    +F  N L  +Y K  + D   +LF+ M +   
Sbjct: 265 LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDV 324

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WT+LI  Y+  G+ E  +     M +S    N++T + ++ AC+ L    +GEQIH  
Sbjct: 325 VSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGH 384

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            ++ G  + + V  S++++Y  SG  + A  VF G+  KD+   + +I  Y++ G ++ A
Sbjct: 385 VLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEA 444

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F     +     +PN++  ++V+SVC     +E+GKQ+H   +  G+  E  V +A+++M
Sbjct: 445 FDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISM 504

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  EEA ++F+ +   N+ISWTA+I+GY   G+  +AIN F +   +G+  D    
Sbjct: 505 YSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTF 564

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYAKGGDLKSARMLLDGFS 423
             V+  CS    ++LG            +S  +     ++D+  + G L  A  ++    
Sbjct: 565 IGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMP 624

Query: 424 CKYT 427
           C YT
Sbjct: 625 C-YT 627


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 198/577 (34%), Positives = 311/577 (53%), Gaps = 2/577 (0%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ C   +D +  +Q+H   IKS  E N  V  +L+ +Y   G  +EA  VF  L  K 
Sbjct: 34  VLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKS 93

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
               N MI  Y +   +E A  +F  +     +PN  T+  ++  C     ++ GK++H 
Sbjct: 94  GASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHA 153

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
                G+  ++ VG A++ MYGK G   EA R+FD +   ++ISWT +I  Y +SG+G +
Sbjct: 154 CIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKE 213

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A    L+    G   ++    ++++ C+    L+   ++H  A+  G   DVR+GTALV 
Sbjct: 214 AYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQ 273

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +YAK G +  AR++ D    +    +N ++  F E     E     LF Q +  G +PD 
Sbjct: 274 MYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHE--AYDLFLQMQTEGCKPDA 331

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           + F  +L+  AS   L   + +H +++ +G   DV VG AL+ MY+K GSID A  +F  
Sbjct: 332 IMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDR 391

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           +  R++VSWNAM+S  A HGLG+ AL +F  M   G  PD ++ + VL AC ++GL + G
Sbjct: 392 MKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEG 451

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
              +  + Q+YG+ P + H  CMVDLLGRAGRL EA   I++         W  L+   +
Sbjct: 452 RSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCR 511

Query: 645 LMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
              N +   L +K  L L+PK+A +++L+SN+YA  G  D  + VRT M +  + KE G 
Sbjct: 512 TYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGR 571

Query: 705 SWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           SWIE+D+K+H F+ +   HPE +EI    D + +++K
Sbjct: 572 SWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIK 608



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 257/498 (51%), Gaps = 5/498 (1%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           +++K  +   DL   + VH  ++KS  + +    NNL+++Y +  RL  A+ +FD ++ +
Sbjct: 33  EVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKK 92

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           S  +W ++I GY++    E  + +  +M     + N  T  +IL+AC+ L    +G+++H
Sbjct: 93  SGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVH 152

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A     G E++V VGT+L+ MY   G   EA  +F  L   D+     MI  Y ++G  +
Sbjct: 153 ACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGK 212

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A+ + + +    F+PN  T+ ++++ C     ++  K++H  A+  G+  ++ VG A+V
Sbjct: 213 EAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALV 272

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G  ++A  +FD +  R+++SW  +I  +   G G +A + FL+    G   D+ 
Sbjct: 273 QMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAI 332

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
              ++++ C+    LE   ++H  A+  G   DVR+GTALV +Y+K G +  AR++ D  
Sbjct: 333 MFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRM 392

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             +    +NA++SG  +      +D + +F +    G++PD VTF  +LS  +    +  
Sbjct: 393 KVRNVVSWNAMISGLAQHGLG--QDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDE 450

Query: 483 GRSLH-AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAY 540
           GRS + A +   G   DV   N ++ +  + G +  A      ++ D D  +W A+L + 
Sbjct: 451 GRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSC 510

Query: 541 ALHG-LGKGALLLFEEMK 557
             +G +  G L+  E +K
Sbjct: 511 RTYGNVELGELVAKERLK 528



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 178/340 (52%), Gaps = 4/340 (1%)

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  V ++ L      + + +  V+  C +   +   KQ+H   +K  + +   V N ++ 
Sbjct: 12  AIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLH 71

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           +Y + G  +EA  +FDA+ +++  SW A+I+GYV   H   A+  F E    G+  ++  
Sbjct: 72  VYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGT 131

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGF 422
              ++  C+  S L+ G ++H   I+HG L SDVR+GTAL+ +Y K G +  AR + D  
Sbjct: 132 YMIILKACASLSALKWGKEVHA-CIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                  +  ++  + +  + + ++   L  Q    G +P+ +T+  +L+  AS+  L  
Sbjct: 191 MNHDIISWTVMIGAYAQ--SGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKW 248

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
            + +H +++  G   DV VG AL+ MYAK GSID A  +F  +  RD+VSWN M+ A+A 
Sbjct: 249 VKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAE 308

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           HG G  A  LF +M+ EG  PD I  L +L AC  +G  E
Sbjct: 309 HGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALE 348



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 22/278 (7%)

Query: 446 EDVMVLFSQ-QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
           E ++VL ++ QR  G+  D   +  +L     Q  L+  + +H   IK+    +  V N 
Sbjct: 11  EAIVVLMNRLQR--GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           L+ +Y +CG +  A  +F  +  +   SWNAM++ Y  H   + A+ LF EM  EG  P+
Sbjct: 69  LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM--- 621
             + + +L+AC      + G  +   I    GL   +     ++ + G+ G ++EA    
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHACIRH-GGLESDVRVGTALLRMYGKCGSINEARRIF 187

Query: 622 -NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK----DAGSFILVSNM 676
            NL+N    S     W  ++       N K    A + +L +E +    +A +++ + N 
Sbjct: 188 DNLMNHDIIS-----WTVMIGAYAQSGNGKE---AYRLMLQMEQEGFKPNAITYVSILNA 239

Query: 677 YAGQGMLDEAAKVRTTMND--LRLSKEAGCSWIEIDSK 712
            A +G L    +V     D  L L    G + +++ +K
Sbjct: 240 CASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAK 277


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 213/686 (31%), Positives = 373/686 (54%), Gaps = 7/686 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P LVK  +   + K    +   +   G   + F A++LI  Y ++ ++DV  KLFD +L
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL 200

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS--LLEDRIFG 178
            +  + W  ++ GY   G  +SV+     M   +   N  T   +L  C+  LL D   G
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID--LG 258

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+H   + SG +    +  SL+SMY   G F +A  +FR ++  D    N MI  Y ++
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G  E +   F  ++SS   P+  TF++++    +   +E  KQ+H   ++  +  +I + 
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           +A++  Y K      A+ +F   +  +++ +TA+ISGY+ +G    ++  F   + + I 
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +   L +++    +   L+LG +LHGF IK G+ +   +G A++D+YAK G +  A  +
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +  S +    +N++++   +  +D+    + +F Q  ++G+  D V+ S  LS  A+  
Sbjct: 499 FERLSKRDIVSWNSMITRCAQ--SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLP 556

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
               G+++H + IK   A+DV   + LI MYAKCG++  A  +FK + +++IVSWN++++
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616

Query: 539 AYALHGLGKGALLLFEEM-KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           A   HG  K +L LF EM ++ G  PD I+ L ++ +C + G  + G+  F  + + YG+
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
           +P  EH+AC+VDL GRAGRL+EA   + S PF     +W TL+   +L  N + + +AS 
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASS 736

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +L+DL+P ++G ++L+SN +A     +   KVR+ M +  + K  G SWIEI+ + H FV
Sbjct: 737 KLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFV 796

Query: 718 ASGKDHPESEEIYSKLDLLNDEMKLK 743
           +   +HPES  IYS L+ L  E++L+
Sbjct: 797 SGDVNHPESSHIYSLLNSLLGELRLE 822



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 165/610 (27%), Positives = 283/610 (46%), Gaps = 22/610 (3%)

Query: 19  SLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQ 78
           ++ P KK +P+   S   +  +    S+   +CS   LL                 + G+
Sbjct: 13  AIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLL-----------------RQGK 55

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-LVRSAI-TWTSLIKGYLD 136
            VHAFL+ +    D++    ++ +YA         K+F  + L RS+I  W S+I  ++ 
Sbjct: 56  QVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVR 115

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G     L     M       +  T   +++AC  L++    + +       G + N FV
Sbjct: 116 NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFV 175

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
            +SLI  Y   G       +F  +  KD    N M+  Y K G  +     F  +     
Sbjct: 176 ASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQI 235

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN  TF  V+SVC   L ++ G QLHGL V  GV  E S+ N++++MY K G  ++A +
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  +S  + ++W  +ISGYV+SG   +++  F E +  G+  D+   ++++   S   N
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           LE   Q+H + ++H    D+ L +AL+D Y K   +  A+ +    +      F A++SG
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           ++        D + +F       + P+ +T   +L +      L  GR LH + IK G+ 
Sbjct: 416 YLHN--GLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
               +G A+I MYAKCG ++ A++IF+ +S RDIVSWN+M++  A       A+ +F +M
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
              G   D +SI   L AC        G  +   + + + L   +   + ++D+  + G 
Sbjct: 534 GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGN 592

Query: 617 LSEAMNLINS 626
           L  AMN+  +
Sbjct: 593 LKAAMNVFKT 602


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 225/739 (30%), Positives = 379/739 (51%), Gaps = 28/739 (3%)

Query: 23  LKKKVPINTFSP------NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGD--- 73
           L+K   I+  +P      NP S +  LC    +   E+ L+  D  Q +++S+       
Sbjct: 43  LRKHHEISVLNPSSITAQNPNSLILELCLKGDL---EKALIHLDSMQELQVSVEEETYIA 99

Query: 74  -LKL---------GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
            L+L         G  VH+++ K+ ++      N L++++ +F  L  A  +F  M  R 
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERD 159

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W  L+ GY   G ++  L +   M     + + +T   +L  C  L D   G ++H 
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+ GFE++V V  +LI+MY   G    A  VF  +  +D    N MI  Y +      
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIV 302
              +F  +     +P+  T T+VIS C E LG E  G+++HG  +K G V E+SV N+++
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISAC-EALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            M+   G  +EAE +F  +  ++L+SWTA+ISGY ++G   KA+  +      G+  D  
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +A+V+  C+    L+ G+ LH FA + G  S V +  +L+D+Y+K   +  A  +    
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    + +I+ G        E    + F QQ +  ++P+ VT   +LS  A    L  
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEA---LFFFQQMILSLKPNSVTLVSVLSACARIGALSC 515

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +HA++++TG   D  + NAL+ MY +CG ++ A+  F    ++D+ SWN +L+ YA 
Sbjct: 516 GKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQ 574

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
            G G  A+ LF +M      PD+I+   +L AC  SG+   G+  F  +E  + + P L+
Sbjct: 575 QGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLK 634

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+A +VDLLGRAGRL +A   I   P    P +W  L++  ++  N +   LA++ + ++
Sbjct: 635 HYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEM 694

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           + K  G +IL+ N+YA  G  DE A+VR  M + RL+ + GCSW+E+  ++H F+     
Sbjct: 695 DTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDF 754

Query: 723 HPESEEIYSKLDLLNDEMK 741
           HP+ +EI + L+   ++M+
Sbjct: 755 HPQIKEINAVLEGFYEKME 773


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 210/676 (31%), Positives = 355/676 (52%), Gaps = 12/676 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  + LG+ VH   +K     + +    LINLYAK   +D A  +F  + VR+ +TW ++
Sbjct: 133 SKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTV 192

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY   G     L +   M     + +    +  + ACS L     G QIH +A +S  
Sbjct: 193 ITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSAT 252

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E +  V   LI +Y        A  +F  + Y+++     MI  Y +   +  A  +F +
Sbjct: 253 ETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWN 312

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  + ++P+ +  T++++ C     + +G+Q+H   +K  +  +  V NA++ MY K   
Sbjct: 313 MTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEH 372

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEFLDLGICCDSSCLATVI 368
             EA  +FDA++E + IS+ A+I GY ++    +A+N F  + F  L        L T +
Sbjct: 373 LTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSL-----RPSLLTFV 427

Query: 369 DGCSVCSN---LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
               V S+   +EL  Q+HG  IK G   D+   +AL+D+Y+K   +  A+ + +    K
Sbjct: 428 SLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYK 487

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N+++ G  +   +  E+ + LF+Q  L+GM P+  TF  L++++++ A +  G+ 
Sbjct: 488 DMVIWNSMIFGHAQN--EQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQ 545

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
            HA+ IK G   D  V NALI MYAKCG I     +F+     D++ WN+M++ YA HG 
Sbjct: 546 FHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGH 605

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
            + AL +F  M      P+ ++ +GVL AC ++G    G+  FN ++  Y + P +EH+A
Sbjct: 606 AEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYA 665

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
            +V+L GR+G+L  A   I   P   +  +WR+L+S   L  N++    A++  L  +P 
Sbjct: 666 SVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPT 725

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           D+G ++L+SN+YA +G+  +   +R  M+     KE GCSWIE+  ++H F+  G++HPE
Sbjct: 726 DSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPE 785

Query: 726 SEEIYSKLDLLNDEMK 741
           +E IYS LD L   +K
Sbjct: 786 AELIYSVLDELTSLIK 801



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 254/499 (50%), Gaps = 3/499 (0%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           +L  A+HA    +G  +D F  N L+  Y+   RL  A+ LFD M  R+ ++W S+I  Y
Sbjct: 35  RLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMY 94

Query: 135 LDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
              G  +  + +     ++  E  NE   + +L AC+  +    GEQ+H  A+K   + N
Sbjct: 95  TQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDAN 154

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V+VGT+LI++Y   GC  EA  VF  L  +     N +I  Y + G   +A  +F  +  
Sbjct: 155 VYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGI 214

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+ +   + +S C     +E G+Q+HG A +     + SV N ++ +Y K      
Sbjct: 215 EGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSA 274

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++FD +  RNL+SWT +ISGY+++    +AI  F      G   D     ++++ C  
Sbjct: 275 ARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGS 334

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + +  G Q+H   IK    +D  +  AL+D+YAK   L  AR + D  +      +NA+
Sbjct: 335 LAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAM 394

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + G+ +    D  + + +F + R   + P  +TF  LL +S+SQ  +   + +H   IK+
Sbjct: 395 IEGYSKN--RDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKS 452

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G + D+   +ALI +Y+KC  ++ A  +F  +  +D+V WN+M+  +A +  G+ A+ LF
Sbjct: 453 GTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLF 512

Query: 554 EEMKREGFAPDDISILGVL 572
            ++   G AP++ + + ++
Sbjct: 513 NQLLLSGMAPNEFTFVALV 531



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 144/296 (48%), Gaps = 8/296 (2%)

Query: 48  SVSCSERTLLFNDWPQLVK----ISIGSGDL--KLGQAVHAFLLKSGSQNDTFEANNLIN 101
           +V+  +R   F+  P L+     + + S  L  +L + +H  ++KSG+  D + A+ LI+
Sbjct: 407 AVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALID 466

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y+K + ++ A+ +F+ +  +  + W S+I G+  +   E  + +   +  S    NE T
Sbjct: 467 VYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFT 526

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
              ++   S L     G+Q HA+ IK+G +N+  V  +LI MY   G  +E   +F    
Sbjct: 527 FVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTC 586

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-K 280
            +DV C N MI  Y + G +E A  VF  +  ++ EPN  TF  V+S C     V EG  
Sbjct: 587 GEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLN 646

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS-WTALISG 335
             + +   + +   I    ++V ++G+ G    A+   + +  +   + W +L+S 
Sbjct: 647 HFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 212/688 (30%), Positives = 376/688 (54%), Gaps = 14/688 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML--- 120
           L+K  I +   +LG+ VHA L++   + D+   N+LI+LY+K   L  A+ +F+ M    
Sbjct: 68  LLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFG 127

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  ++W++++  + ++G     + +  +        N++  + ++ ACS  +    G  
Sbjct: 128 KRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 181 IHAFAIKSG-FENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           I  F +K+G FE++V VG SLI M+      F  A  VF  ++  +V     MI    + 
Sbjct: 188 ILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G    A   F+ ++ S FE + +T ++V S C E   +  G+QLH  A++ G+  ++   
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVEC- 306

Query: 299 NAIVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYVRSGH-GGKAINGFLEFLD 354
            ++V MY K    G  ++  ++FD + + +++SWTALI+GY+++ +   +AIN F E + 
Sbjct: 307 -SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMIT 365

Query: 355 LG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
            G +  +    ++    C   S+  +G Q+ G A K G  S+  +  +++ ++ K   ++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRME 425

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            AR   +  S K    +N  L G    +  D E    L S+     +     TF+ LLS 
Sbjct: 426 DARTAFESLSEKNLVSYNTFLDGTCRNL--DFEHAFELLSEIAERELGVSAFTFASLLSG 483

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            A+   L +G  +H+  +K G + +  V NALI+MY+KCGSID A ++F  + +R+++SW
Sbjct: 484 VANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISW 543

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            +M++ +A HG  +  L  F +M +EG  P++++ + +L AC + GL   G   FN + +
Sbjct: 544 TSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            + ++P +EH+ACMVDLL RAG L++A   IN+ PF    L+WRT +   ++ +N++   
Sbjct: 604 DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGK 663

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
           LA++++L+ +P +  ++I +SN+YA  G  +E+ ++R  M +  L KE GCSWIE+  K+
Sbjct: 664 LAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKV 723

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK 741
           H F      HP + +IY +LD L  E+K
Sbjct: 724 HKFYVGDTSHPNAHQIYDELDWLITEIK 751



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 217/441 (49%), Gaps = 28/441 (6%)

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVI 165
           NR++VA +L               I  +L+ GD    +     M R      +  T S +
Sbjct: 24  NRINVADRL---------------ILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSL 68

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY--- 222
           L++C        G+ +HA  I+   E +  +  SLIS+Y  SG   +A++VF  +     
Sbjct: 69  LKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGK 128

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +DV   + M+  +   G    A  +FV  L     PNDY +T VI  C  +  V  G+ +
Sbjct: 129 RDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVI 188

Query: 283 HGLAVKFGVVR-EISVGNAIVTMYGKHGMS-EEAERMFDAISERNLISWTALISGYVRSG 340
            G  +K G    ++ VG +++ M+ K   S E A ++FD +SE N+++WT +I+  ++ G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +AI  FL+ +  G   D   L++V   C+   NL LG QLH +AI+ G   DV    
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVE--C 306

Query: 401 ALVDIYAK---GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +LVD+YAK    G +   R + D         + A+++G+M+   +   + + LFS+   
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQN-CNLATEAINLFSEMIT 365

Query: 458 AG-MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
            G +EP+  TFS       + +    G+ +  ++ K G A++  V N++I+M+ KC  ++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRME 425

Query: 517 GAFQIFKGISDRDIVSWNAML 537
            A   F+ +S++++VS+N  L
Sbjct: 426 DARTAFESLSEKNLVSYNTFL 446



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 4/121 (3%)

Query: 459 GMEP-DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           G+ P D VTFS LL           G+ +HA  I+     D ++ N+LI++Y+K G +  
Sbjct: 56  GIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTK 115

Query: 518 AFQIFKGI---SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           A  +F+ +     RD+VSW+AM++ +  +G    A+ LF E    G  P+D     V++A
Sbjct: 116 AKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRA 175

Query: 575 C 575
           C
Sbjct: 176 C 176


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 190/569 (33%), Positives = 330/569 (57%), Gaps = 5/569 (0%)

Query: 164 VILEACSLLEDRIFGEQIHAF-AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           V+L+AC   +D   G ++H   +  + F N+  + T +I+MY   G   ++  VF  L  
Sbjct: 110 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 169

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQ 281
           K++   N ++  Y +    E A  +F  L+S ++ +P+++T   VI  C   L +  G+ 
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 229

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA-ERMFDAISERNLISWTALISGYVRSG 340
           +HG+A K  +V ++ VGNA++ MYGK G+ EEA +R+FD +  + + SW AL+ GY ++ 
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS 289

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              KA++ +L+  D G+  D   + +++  CS   +L  G ++HGFA+++G   D  +G 
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           +L+ +Y   G   +A++L DG   +    +N +++G+ +    DE   + LF Q    G+
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDE--AINLFRQMLSDGI 407

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +P  +    +    +  + L  G+ LH +++K     D+ V +++I MYAK G I  + +
Sbjct: 408 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQR 467

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           IF  + ++D+ SWN +++ Y +HG GK AL LFE+M R G  PDD +  G+L AC ++GL
Sbjct: 468 IFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGL 527

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            E G+  FN++  ++ + P LEH+ C+VD+LGRAGR+ +A+ LI   P      +W +L+
Sbjct: 528 VEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 587

Query: 641 SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
           S  ++  N       + +LL+LEP+   +++L+SN++AG G  D+  +VR  M D+ L K
Sbjct: 588 SSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQK 647

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           +AGCSWIE+  K+H+F+   +  PE EE+
Sbjct: 648 DAGCSWIEVGGKVHNFLIGDEMLPELEEV 676



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 262/513 (51%), Gaps = 18/513 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANN-LINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           D+++G+ +H  +  S    + F  N  +I +Y+       ++ +FD +  ++   W +++
Sbjct: 120 DIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIV 179

Query: 132 KGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
             Y  +  +E  + I  ++   +E K +  T   +++AC+ L D   G+ IH  A K   
Sbjct: 180 SAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDL 239

Query: 191 ENNVFVGTSLISMYFHSGCFREA-ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            ++VFVG +LI+MY   G   EA + VF  +  K V   N ++  Y +  +   A  +++
Sbjct: 240 VSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYL 299

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +  S  +P+ +T  +++  C     +  G+++HG A++ G+  +  +G +++++Y   G
Sbjct: 300 QMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCG 359

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A+ +FD +  R+L+SW  +I+GY ++G   +AIN F + L  GI      +  V  
Sbjct: 360 KPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCG 419

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS  S L LG +LH FA+K     D+ + ++++D+YAKGG +  ++ + D    K  A 
Sbjct: 420 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 479

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR------G 483
           +N I++G+   I    ++ + LF +    G++PD  TF+ +L ++ S A LV        
Sbjct: 480 WNVIIAGY--GIHGRGKEALELFEKMLRLGLKPDDFTFTGIL-MACSHAGLVEDGLEYFN 536

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
           + L+ ++I+        V    + M  + G ID A ++ + +  D D   W+++LS+  +
Sbjct: 537 QMLNLHNIEPKLEHYTCV----VDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRI 592

Query: 543 HG-LGKGALLLFEEMKREGFAPDDISILGVLQA 574
           HG LG G  +  + ++ E   P++  ++  L A
Sbjct: 593 HGNLGLGEKVANKLLELEPEKPENYVLISNLFA 625



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 183/361 (50%), Gaps = 2/361 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVA-QKLFDGML 120
           P ++K   G  DL LGQ +H    K    +D F  N LI +Y K   ++ A +++FD M 
Sbjct: 212 PCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMD 271

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            ++  +W +L+ GY  + D    L +   M  S    +  T   +L ACS ++   +GE+
Sbjct: 272 TKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEE 331

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH FA+++G   + F+G SL+S+Y   G    A+ +F G+ ++ +   N MI  Y++ G 
Sbjct: 332 IHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGL 391

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + A ++F  +LS   +P +     V   C +   +  GK+LH  A+K  +  +I V ++
Sbjct: 392 PDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSS 451

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           I+ MY K G    ++R+FD + E+++ SW  +I+GY   G G +A+  F + L LG+  D
Sbjct: 452 IIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPD 511

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 ++  CS    +E GL+     +  H     +   T +VD+  + G +  A  L+
Sbjct: 512 DFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLI 571

Query: 420 D 420
           +
Sbjct: 572 E 572


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 225/739 (30%), Positives = 379/739 (51%), Gaps = 28/739 (3%)

Query: 23  LKKKVPINTFSP------NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGD--- 73
           L+K   I+  +P      NP S +  LC    +   E+ L+  D  Q +++S+       
Sbjct: 43  LRKHHEISVLNPSSITAQNPNSLILELCLKGDL---EKALIHLDSMQELQVSVEEETYIA 99

Query: 74  -LKL---------GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
            L+L         G  VH+++ K+ ++      N L++++ +F  L  A  +F  M  R 
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERD 159

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W  L+ GY   G ++  L +   M     + + +T   +L  C  L D   G ++H 
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+ GFE++V V  +LI+MY   G    A  VF  +  +D    N MI  Y +      
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIV 302
              +F  +     +P+  T T+VIS C E LG E  G+++HG  +K G V E+SV N+++
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISAC-EALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            M+   G  +EAE +F  +  ++L+SWTA+ISGY ++G   KA+  +      G+  D  
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +A+V+  C+    L+ G+ LH FA + G  S V +  +L+D+Y+K   +  A  +    
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    + +I+ G        E    + F QQ +  ++P+ VT   +LS  A    L  
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEA---LFFFQQMILSLKPNSVTLVSVLSACARIGALSC 515

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +HA++++TG   D  + NAL+ MY +CG ++ A+  F    ++D+ SWN +L+ YA 
Sbjct: 516 GKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQ 574

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
            G G  A+ LF +M      PD+I+   +L AC  SG+   G+  F  +E  + + P L+
Sbjct: 575 QGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLK 634

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+A +VDLLGRAGRL +A   I   P    P +W  L++  ++  N +   LA++ + ++
Sbjct: 635 HYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEM 694

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           + K  G +IL+ N+YA  G  DE A+VR  M + RL+ + GCSW+E+  ++H F+     
Sbjct: 695 DTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDF 754

Query: 723 HPESEEIYSKLDLLNDEMK 741
           HP+ +EI + L+   ++M+
Sbjct: 755 HPQIKEINAVLEGFYEKME 773


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 226/683 (33%), Positives = 368/683 (53%), Gaps = 13/683 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           ++KI     D  LG+ +HA  ++ G    D     +L+++Y  ++ +   +K+F+GML R
Sbjct: 61  IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + +TWTSL+ GY+  G    V+ +   M       N  T S +L   +       G+ +H
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A +IK G  + VFV  SL++MY   G   EA  VF  +  +D+   N ++      G   
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDL 240

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            A  +F    SS     + T++ VI++C   ++LG+   +QLH   +K G     +V  A
Sbjct: 241 EALQLFHDSRSSITMLTESTYSTVINLCANLKHLGL--ARQLHSSVLKHGFHSYGNVMTA 298

Query: 301 IVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           ++  Y K G  ++A  +F  +S  +N++SWTA+I G +++G    A   F    + G+  
Sbjct: 299 LMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAP 358

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +    +T++      S      Q+H   IK  Y     +GTAL+  Y+K    + A  + 
Sbjct: 359 NDLTYSTIL----TVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIF 414

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                K    ++A+L+ + +  A D       F +  + G++P+  T S  +   AS A 
Sbjct: 415 KMIDQKDVVSWSAMLTCYAQ--AGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAA 472

Query: 480 LVR-GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            V  GR  HA SIK      + V +AL++MYA+ GSI+ A  +F+  +DRD++SWN+MLS
Sbjct: 473 GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLS 532

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            YA HG  + AL +F +M+ EG   D ++ L V+  C ++GL E G   F+ + + YG+ 
Sbjct: 533 GYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGIT 592

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P ++H+ACMVDL  RAG+L E M+LI   PF   P +WR L+   ++  N +   LA+++
Sbjct: 593 PTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEK 652

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           LL LEP D+ +++L+SN+Y+  G   E  +VR  M+  ++ KEAGCSWI+I +K+H F+A
Sbjct: 653 LLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIA 712

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
           S K HP SE+IY+KL  +  ++K
Sbjct: 713 SDKSHPLSEQIYAKLRAMTAKLK 735



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 9/301 (2%)

Query: 344 KAINGFLE-FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTA 401
           +A++ FL+     G C     L  +I  C    +  LG QLH   ++ G+   D+R+GT+
Sbjct: 37  QALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTS 96

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           LVD+Y     +   R + +G   +    + ++L+G+++  A    DVM LF + R  G+ 
Sbjct: 97  LVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQ--AGVLLDVMSLFFRMRAEGVW 154

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           P+P TFS +LS+ ASQ  +  G+ +HA SIK G  + V V N+L+ MYAKCG ++ A  +
Sbjct: 155 PNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVV 214

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           F  +  RD+VSWN +++   L+G    AL LF + +       + +   V+  C  + L 
Sbjct: 215 FCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLC--ANLK 272

Query: 582 EGGIC--LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
             G+   L + + + +G          ++D   +AG+L +A+++      S++ + W  +
Sbjct: 273 HLGLARQLHSSVLK-HGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAM 331

Query: 640 V 640
           +
Sbjct: 332 I 332


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 214/636 (33%), Positives = 336/636 (52%), Gaps = 21/636 (3%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R+ ++W SLI GY   G Y  V+ +  +   S+ + ++ T S  L  C    D   G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             IHA    SG    V +  SLI MY   G    A  VF      D    N +I  Y + 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG--VEEGKQLHGLAVKFGVVREIS 296
           G ++    + V +L      N Y   + +  C  N    +E GK LHG AVK G+  ++ 
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR-----SGHGGKAINGFLE 351
           VG A++  Y K G  E+A ++F  + + N++ + A+I+G+++          +A+  F E
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
               G+       ++++  CS     E G Q+H    K+   SD  +G ALV++Y+  G 
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 300

Query: 412 LKSARMLLDGFSCKYTA------EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           ++      DG  C ++        + +++ G ++      E  + LF +   +G +PD  
Sbjct: 301 IE------DGLKCFHSTPKLDVVSWTSLIVGHVQN--GQFEGGLTLFHELLFSGRKPDEF 352

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T S +LS  A+ A +  G  +HAY+IKTG     I+ N+ I MYAKCG ID A   FK  
Sbjct: 353 TISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKET 412

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
            + DIVSW+ M+S+ A HG  K A+ LFE MK  G AP+ I+ LGVL AC + GL E G+
Sbjct: 413 KNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGL 472

Query: 586 CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
             F  +++ +G+ P ++H AC+VDLLGRAGRL+EA + I  S F   P++WR+L+S  ++
Sbjct: 473 RYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRV 532

Query: 646 MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
              +      ++R+++LEP+ A S++L+ N+Y   G+   A ++R  M D  + KE G S
Sbjct: 533 HKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLS 592

Query: 706 WIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           WIE+ + +H FVA  + HP S+ IY +L+ + +E+K
Sbjct: 593 WIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIK 628



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 231/481 (48%), Gaps = 13/481 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+LG+ +HA +  SG        N+LI++Y K  R+D A+ +F+      +++W SLI 
Sbjct: 56  DLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIA 115

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC-SLLEDRI-FGEQIHAFAIKSGF 190
           GY+  G  + +L +   M R     N +     L+AC S     I  G+ +H  A+K G 
Sbjct: 116 GYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL 175

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI-----LEYNKAGESEMAF 245
           + +V VGT+L+  Y   G   +A  +F+ +   +V   N MI     +E      +  A 
Sbjct: 176 DLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAM 235

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           ++F  + S   +P+++TF++++  C      E GKQ+H    K+ +  +  +GNA+V +Y
Sbjct: 236 YLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 295

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
              G  E+  + F +  + +++SWT+LI G+V++G     +  F E L  G   D   ++
Sbjct: 296 SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 355

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            ++  C+  + ++ G Q+H +AIK G  +   +  + + +YAK GD+ SA M        
Sbjct: 356 IMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNP 415

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-R 484
               ++ ++S   +     E   + LF   + +G+ P+ +TF  +L   +    +  G R
Sbjct: 416 DIVSWSVMISSNAQHGCAKE--AVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLR 473

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA--FQIFKGISDRDIVSWNAMLSAYAL 542
                    G   +V     ++ +  + G +  A  F +  G  + D V W ++LSA  +
Sbjct: 474 YFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGF-EGDPVMWRSLLSACRV 532

Query: 543 H 543
           H
Sbjct: 533 H 533



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 6/351 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  ++ G+ +H   +K G   D      L++ YAK   L+ A K+F  M   + + + ++
Sbjct: 157 SSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAM 216

Query: 131 IKGYLD-----DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
           I G+L      D      + +  +M     K +E T S IL+ACS +E    G+QIHA  
Sbjct: 217 IAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQI 276

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
            K   +++ F+G +L+ +Y  SG   +    F      DV     +I+ + + G+ E   
Sbjct: 277 FKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGL 336

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +F  LL S  +P+++T + ++S C     V+ G+Q+H  A+K G+     + N+ + MY
Sbjct: 337 TLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMY 396

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G  + A   F      +++SW+ +IS   + G   +A++ F      GI  +     
Sbjct: 397 AKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFL 456

Query: 366 TVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSA 415
            V+  CS    +E GL+      K HG   +V+    +VD+  + G L  A
Sbjct: 457 GVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEA 507


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 208/672 (30%), Positives = 363/672 (54%), Gaps = 4/672 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  L  G+ +H  +L S  + DT   N+++++Y K   L  A+++FD M  R+ +++TS+
Sbjct: 77  SRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 136

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY  +G     + +   M +++   ++     I++AC+   D + G+Q+HA  IK   
Sbjct: 137 ITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLES 196

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG-ESEMAFHVFV 249
            +++    +LI+MY       +A  VF G+  KD+   + +I  +++ G E E   H+  
Sbjct: 197 SSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKE 256

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            L    F PN+Y F + +  C   L  + G Q+HGL +K  +      G ++  MY + G
Sbjct: 257 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCG 316

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             + A R+F+ I   +  SW  +I+G   +G+  +A++ F E  + G   D+  L +++ 
Sbjct: 317 FLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLC 376

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY-TA 428
             +    L  G+Q+H F IK G+L+D+ +  +L+ +Y    DL     L + F  K  + 
Sbjct: 377 AQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSV 436

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +NAIL+  ++   +   +++ LF    ++  EPD +T   LL      + L  G  +H 
Sbjct: 437 SWNAILTACLQH--EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC 494

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           YS KTG   +  + N LI MYAKCGS+  A +IF  + + D+VSW+ ++  YA  G G+ 
Sbjct: 495 YSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEE 554

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL+LF EMK  G  P+ ++ +GVL AC + GL E G+ L+  ++  +G+ P  EH +C+V
Sbjct: 555 ALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVV 614

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLL RAG L+EA   I+        ++W+TL+S  K   N   +  A++ +L ++P ++ 
Sbjct: 615 DLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNST 674

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           + +L+ +M+A  G  ++AA +R++M    + K  G SWI+++ K+H F A    HPE ++
Sbjct: 675 AHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLHPERDD 734

Query: 729 IYSKLDLLNDEM 740
           IY+ L  +  +M
Sbjct: 735 IYTVLHNIWSQM 746



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 231/480 (48%), Gaps = 16/480 (3%)

Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
           ACS       G +IH   + S  + +  +   ++SMY   G  R+A  VF  +  +++  
Sbjct: 73  ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 132

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
              +I  Y++ G+   A  +++ +L +D  P+ + F ++I  C     V  GKQLH   +
Sbjct: 133 YTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVI 192

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           K      +   NA++ MY +     +A ++F  I  ++LISW+++I+G+ + G   +A++
Sbjct: 193 KLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALS 252

Query: 348 GFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
              E L  G+   +     + +  CS     + G Q+HG  IK     +   G +L D+Y
Sbjct: 253 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMY 312

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
           A+ G L SAR + +      TA +N I++G       DE   + +FS+ R +G  PD ++
Sbjct: 313 ARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADE--AVSVFSEMRNSGFIPDAIS 370

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
              LL        L +G  +H++ IK G+ AD+ V N+L+TMY  C  +   F +F+   
Sbjct: 371 LRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFR 430

Query: 527 DR-DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGG 584
           ++ D VSWNA+L+A   H      L LF+ M      PD I++  +L+ C+  S L  G 
Sbjct: 431 NKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 490

Query: 585 ICLFNEIEQIYGLRP--ILEHFA--CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
                     Y  +   +LE F    ++D+  + G L +A  + +S    +  + W TL+
Sbjct: 491 QV------HCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDV-VSWSTLI 543



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 235/485 (48%), Gaps = 6/485 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    +GD+ LG+ +HA ++K  S +     N LI +Y +FN++  A K+F G+  + 
Sbjct: 171 IIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKD 230

Query: 124 AITWTSLIKGYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
            I+W+S+I G+   G ++E++  +   +       NE+     L+ACS L    +G QIH
Sbjct: 231 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 290

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
              IK     N   G SL  MY   G    A  VF  +   D    N +I      G ++
Sbjct: 291 GLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYAD 350

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  VF  + +S F P+  +  +++    + + + +G Q+H   +K G + ++SV N+++
Sbjct: 351 EAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLL 410

Query: 303 TMYGKHGMSEEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           TMY           +F+    + + +SW A+++  ++     + +  F   L      D 
Sbjct: 411 TMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDH 470

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             +  ++ GC   S+L+LG Q+H ++ K G + +  +   L+D+YAK G L+ AR + D 
Sbjct: 471 ITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDS 530

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
                   ++ ++ G+ +  +   E+ ++LF + + +G+EP+ VTF  +L+  +    + 
Sbjct: 531 MDNGDVVSWSTLIVGYAQ--SGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVE 588

Query: 482 RGRSLHA-YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
            G  L+A    + G +      + ++ + A+ G ++ A +    +  + D+V W  +LSA
Sbjct: 589 EGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSA 648

Query: 540 YALHG 544
               G
Sbjct: 649 CKTQG 653



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 159/322 (49%), Gaps = 1/322 (0%)

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +S F+    T+ ++I  C  +  + +G+++H   +      +  + N I++MYGK G   
Sbjct: 57  NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLR 116

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A  +FD + ERNL+S+T++I+GY ++G   +AI  +L+ L   +  D     ++I  C+
Sbjct: 117 DAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACA 176

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              ++ LG QLH   IK    S +    AL+ +Y +   +  A  +  G   K    +++
Sbjct: 177 CAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSS 236

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I++GF  ++  + E +  L          P+   F   L   +S      G  +H   IK
Sbjct: 237 IIAGF-SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK 295

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                + I G +L  MYA+CG +D A ++F  I   D  SWN +++  A +G    A+ +
Sbjct: 296 LELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSV 355

Query: 553 FEEMKREGFAPDDISILGVLQA 574
           F EM+  GF PD IS+  +L A
Sbjct: 356 FSEMRNSGFIPDAISLRSLLCA 377


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 212/679 (31%), Positives = 355/679 (52%), Gaps = 15/679 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEA--NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G ++  +AVH  +LKS  ++       N+  ++Y+K +    A  +FD M  R+  +WT 
Sbjct: 132 GSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTV 191

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G  + G +       C+M  S    ++   S I+++C  L+    G+ +HA  +  G
Sbjct: 192 MIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRG 251

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F  ++FV TSL++MY   G   ++  VF  +   +    N MI      G    AF +FV
Sbjct: 252 FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFV 311

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            + +    PN YT  +V     + + V  GK++   A + G+   + VG A++ MY K G
Sbjct: 312 RMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCG 371

Query: 310 MSEEAERMFDAISERNLIS------WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
              +A  +FD     N I+      W A+ISGY +SG   +A+  +++    GI  D   
Sbjct: 372 SLHDARSVFDT----NFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYT 427

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
             +V +  +   +L+ G  +HG  +K G  L  V +  A+ D Y+K G L+  R + D  
Sbjct: 428 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 487

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             +    +  +++ + +  +   E+ +  F   R  G  P+  TFS +L   AS   L  
Sbjct: 488 EERDIVSWTTLVTAYSQ--SSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEY 545

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           GR +H    K G   +  + +ALI MYAKCGSI  A ++F  IS+ DIVSW A++S YA 
Sbjct: 546 GRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQ 605

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HGL + AL LF  M+  G   + +++L VL AC + G+ E G+  F ++E  YG+ P +E
Sbjct: 606 HGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEME 665

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+AC++DLLGR GRL +AM  I   P   + ++W+TL+   ++  N +   +A++++L +
Sbjct: 666 HYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSI 725

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
            P+ + +++L+SN Y   G  ++   +R  M D  + KE G SWI +  ++H F +  + 
Sbjct: 726 RPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQ 785

Query: 723 HPESEEIYSKLDLLNDEMK 741
           HP+ +EIY KL+ L +++K
Sbjct: 786 HPQKKEIYVKLEELREKIK 804



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 244/493 (49%), Gaps = 15/493 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  +++  IG   L+LG+ VHA ++  G     F + +L+N+YAK   ++ +  +F+ M 
Sbjct: 224 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 283

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
             + ++W ++I G   +G +     +   M       N +T   + +A   L D   G++
Sbjct: 284 EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE 343

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC-----VNFMILEY 235
           +   A + G E NV VGT+LI MY   G   +A +VF       + C      N MI  Y
Sbjct: 344 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT---NFINCGVNTPWNAMISGY 400

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VRE 294
           +++G S+ A  ++V +  +    + YT+ +V +    +  ++ G+ +HG+ +K G+ +  
Sbjct: 401 SQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMV 460

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
           +SV NAI   Y K G  E+  ++FD + ER+++SWT L++ Y +S  G +A+  F    +
Sbjct: 461 VSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMRE 520

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G   +    ++V+  C+    LE G Q+HG   K G  ++  + +AL+D+YAK G +  
Sbjct: 521 EGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITE 580

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A  + D  S      + AI+SG+ +      ED + LF +  L+G++ + VT   +L  +
Sbjct: 581 AGKVFDKISNPDIVSWTAIISGYAQH--GLVEDALQLFRRMELSGIKANAVTLLCVL-FA 637

Query: 475 ASQACLVRGRSLHAYSIKTGYAA--DVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIV 531
            S   +V     +   ++ GY    ++     +I +  + G +D A +  + +  + + +
Sbjct: 638 CSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEM 697

Query: 532 SWNAMLSAYALHG 544
            W  +L    +HG
Sbjct: 698 VWQTLLGGCRVHG 710



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 20/321 (6%)

Query: 265 NVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +V+  C E   + E K +HGL +K  F     + + N    +Y K      A  +FD + 
Sbjct: 123 DVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP 182

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           +RN+ SWT +I G    G        F E L+ GI  D    + +I  C    +LELG  
Sbjct: 183 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 242

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H   +  G+ + + + T+L+++YAK G ++ +  + +  +      +NA++SG      
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 302

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV---RGRSLHAYSIKTGYAADV 499
             E     LF + +     P+  T   L+S+S +   LV    G+ +   + + G   +V
Sbjct: 303 HLE--AFDLFVRMKNGACTPNMYT---LVSVSKAVGKLVDVNMGKEVQNCASELGIEGNV 357

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVS------WNAMLSAYALHGLGKGALLLF 553
           +VG ALI MY+KCGS+  A  +F    D + ++      WNAM+S Y+  G  + AL L+
Sbjct: 358 LVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCSQEALELY 413

Query: 554 EEMKREGFAPDDISILGVLQA 574
            +M + G   D  +   V  A
Sbjct: 414 VQMCQNGITSDLYTYCSVFNA 434


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 223/794 (28%), Positives = 413/794 (52%), Gaps = 58/794 (7%)

Query: 6   PANLLQPPFKSQQ-SLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFND---- 60
           P+   QPP   Q+ +  PL  K P    SP+ +S  +++ ++ S +   R+  F +    
Sbjct: 24  PSLQTQPPPSIQKPTASPLTSKTPPKPTSPS-RSTASWVDALRSRT---RSNDFREAIST 79

Query: 61  ---------------WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYA 104
                          +P ++K   G  DLK G+ +HA  +K G  + +   AN L+N+Y 
Sbjct: 80  YIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYG 139

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           K   +    K+FD +  R  ++W S I        +E  L     M     + +  T   
Sbjct: 140 KCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVS 199

Query: 165 ILEACS---LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
           +  ACS   ++     G+Q+H ++++ G +   F   +L++MY   G   +++ +F    
Sbjct: 200 VALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFV 258

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            +D+   N MI  ++++     A   F  ++    E +  T  +V+  C     ++ GK+
Sbjct: 259 DRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKE 318

Query: 282 LHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           +H   ++   + E S VG+A+V MY      E   R+FD I  R +  W A+ISGY R+G
Sbjct: 319 IHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNG 378

Query: 341 HGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
              KA+  F+E + + G+  +++ +A+V+  C  C        +HG+A+K G+  D  + 
Sbjct: 379 LDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQ 438

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ-QRLA 458
            AL+D+Y++ G +  +  + D    +    +N +++G++  ++    + +VL  + QR+ 
Sbjct: 439 NALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYV--LSGRYSNALVLLHEMQRME 496

Query: 459 GM----------------EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
                             +P+ +T   +L   A+ A + +G+ +HAY+I+   A+D+ VG
Sbjct: 497 NTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVG 556

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-- 560
           +AL+ MYAKCG ++ + ++F  + ++++++WN ++ A  +HG G+ AL LF+ M  E   
Sbjct: 557 SALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGR 616

Query: 561 ---FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
                P++++ + V  AC +SGL   G+ LF  ++  +G+ P  +H+AC+VDLLGRAG+L
Sbjct: 617 GGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQL 676

Query: 618 SEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
            EA  L+N+ P     +  W +L+   ++  N +   +A+K LL LEP  A  ++L+SN+
Sbjct: 677 EEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNI 736

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           Y+  G+ ++A +VR  M  + + KE GCSWIE   ++H F+A    HP+SE+++  L+ L
Sbjct: 737 YSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETL 796

Query: 737 NDEMKLK--VKDSS 748
           +++M+ +  V D+S
Sbjct: 797 SEKMRKEGYVPDTS 810


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 206/654 (31%), Positives = 361/654 (55%), Gaps = 2/654 (0%)

Query: 88  GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIA 147
           G   D F  ++LI LYA+   ++ A++LFD M  +  + W  ++ G++  G+  S + + 
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 148 CDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
            DM   + K N  T + +L  C+      FG Q+H   I  GF  +  V  +L++MY   
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
           G   +A  +F  +   +V   N MI  + + G  + A  +F  ++S+   P+  TF + +
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
               E+  +++GK++HG  ++ G+  ++ + +A++ +Y K      A ++F   +  +++
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
             TA+ISGYV +G    A+  F   L+  +  ++  LA+V+  C+  + L LG +LH   
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           +KHG      +G+A++D+YAK G L  A  +      K    +NAI++   +      ++
Sbjct: 302 LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQN--GKPQE 359

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
            + LF Q    G+  D V+ S  LS  A+   L  G+++H++ IK  + ++V   +ALI 
Sbjct: 360 AIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALID 419

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY KCG++  A  +F  + +++ VSWN++++AY  HG  + +L LF +M  +G  PD ++
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            L +L AC ++G  + GI  F  + + YG+   +EH+AC+VDL GRAGRL+EA   I + 
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNM 539

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           PFS    +W TL+   ++  N + + +AS+ LLDL+P+++G ++L+SN++A  G      
Sbjct: 540 PFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVR 599

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           K+R+ M    + K  G SWIE++   H FVA+   HPES +IYS L+ L  E++
Sbjct: 600 KIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELR 653



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 222/472 (47%), Gaps = 4/472 (0%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + G  +H  ++  G   D   AN L+ +Y+KF +L  A KLF+ M   + +TW  +I G+
Sbjct: 90  EFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGF 149

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           + +G  +    +  +M  +    +  T +  L + +       G++IH + ++ G   +V
Sbjct: 150 VQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDV 209

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           F+ ++LI +YF       A  +F+     D+     +I  Y   G +  A  +F  LL  
Sbjct: 210 FLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEE 269

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              PN  T  +V+  C     +  GK+LH   +K G+     VG+AI+ MY K G  + A
Sbjct: 270 KMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLA 329

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            ++F  + E++ + W A+I+   ++G   +AI+ F +    G+  D   ++  +  C+  
Sbjct: 330 YQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANL 389

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
             L  G  +H F IK  + S+V   +AL+D+Y K G+L  AR + D    K    +N+I+
Sbjct: 390 PALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSII 449

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKT 493
           + +        E  + LF +    G++PD VTF  +LS       + +G +     + + 
Sbjct: 450 AAYGSH--GHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEY 507

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           G  A +     ++ ++ + G ++ AF+  K +    D   W  +L A  +HG
Sbjct: 508 GIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHG 559



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 163/346 (47%), Gaps = 1/346 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  LK G+ +H ++L+ G   D F  + LI++Y K   + +A K+F        +  T++
Sbjct: 187 SASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAI 246

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY+ +G     L I   +   +   N  T + +L AC+ L     G+++HA  +K G 
Sbjct: 247 ISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGL 306

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           +    VG++++ MY   G    A  +FR +  KD  C N +I   ++ G+ + A  +F  
Sbjct: 307 DERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQ 366

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +       +  + +  +S C     +  GK +H   +K     E+   +A++ MYGK G 
Sbjct: 367 MGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGN 426

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A  +FD + E+N +SW ++I+ Y   GH   ++  F + L+ GI  D     T++  
Sbjct: 427 LSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSA 486

Query: 371 CSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           C     ++ G+Q       ++G  + +     +VD++ + G L  A
Sbjct: 487 CGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEA 532



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 1/246 (0%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G   L LG+ +HA +LK G        + ++++YAK  RLD+A ++F  M  + A+ W +
Sbjct: 287 GLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNA 346

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I     +G  +  + +   M R    ++  + S  L AC+ L     G+ IH+F IK  
Sbjct: 347 IITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGA 406

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F++ VF  ++LI MY   G    A  VF  +  K+    N +I  Y   G  E++  +F 
Sbjct: 407 FDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFH 466

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKH 308
            +L    +P+  TF  ++S C     V++G Q    +  ++G+   +     IV ++G+ 
Sbjct: 467 KMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRA 526

Query: 309 GMSEEA 314
           G   EA
Sbjct: 527 GRLNEA 532


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 210/647 (32%), Positives = 349/647 (53%), Gaps = 6/647 (0%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
            N L++++ +F  L  A  +F  M  R   +W  L+ GY   G ++  L +   M  +E 
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + N +T   +L+ C+ + D   G++IHA  I+ GFE++V VG +LI+MY   G    A  
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F  +  +D    N MI  Y + G       +F  +     +P+  T T V S C E L 
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC-ELLD 313

Query: 276 VEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
            E  G+ +HG  VK     +IS+ N+++ MY   G  EEAE +F  +  ++++SWTA+I+
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
             V      KA+  +      GI  D   L +V+  C+   +L+LG++LH  AIK G +S
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
            V +  +L+D+Y+K   + +A  +    S K    + +++ G   +I +   + ++ F Q
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGL--RINNRSFEALLFFRQ 491

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            +   M+P+ VT   +LS  A    L+RG+ +HA++++TG   D  + NA++ MY +CG 
Sbjct: 492 MK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGR 550

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
              A   F     +D+ +WN +L+ YA  G  K A+ LF++M      PD+I+ + +L A
Sbjct: 551 KVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCA 609

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C  SG+   G+  FN ++  Y L P L+H+AC+VD+LGRAG+L +A + I   P      
Sbjct: 610 CSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAA 669

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           +W  L++  ++  N +   +A+KR+ + + K  G +IL+ N+YAG G  D+ +KVR+ M 
Sbjct: 670 IWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMR 729

Query: 695 DLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +  LS + GCSW+EI  K+H F++    H +S+EI   LD    +MK
Sbjct: 730 ERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMK 776



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 252/504 (50%), Gaps = 9/504 (1%)

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V +G +L+SM+   G   +A  VF  ++ +DV   N ++  Y KAG  + A +++  +L 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           ++  PN YTF +V+  C     +  GK++H   ++FG   ++ VGNA++TMY K G    
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +FD + +R+ ISW A+ISGY  +G G + +  F    +L +  D   + TV   C +
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             N  LG  +HG+ +K  +  D+ +  +L+ +Y+  G L+ A  +      K    + A+
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++  +      +   +  +    L G+ PD +T   +LS  A    L  G  LH  +IKT
Sbjct: 372 IASLVSHKLPFK--AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT 429

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G  + VIV N+LI MY+KC  +D A ++F+ IS +++VSW +++    ++     ALL F
Sbjct: 430 GLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFF 489

Query: 554 EEMKREGFAPDDISILGVLQACIYSG-LSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
            +MK E   P+ ++++ VL AC   G L  G     + +    G    L +   ++D+  
Sbjct: 490 RQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN--AILDMYV 546

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE-PKDAGSFI 671
           R GR   A+N  NS    +    W  L++       +K ++    ++L+LE   D  +FI
Sbjct: 547 RCGRKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFI 604

Query: 672 LVSNMYAGQGMLDEAAKVRTTMND 695
            +    +  GM+ E  +    M +
Sbjct: 605 SLLCACSKSGMVTEGLEYFNIMKN 628



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 190/369 (51%), Gaps = 3/369 (0%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N  + E    G  E A      +L    E  +  +  ++ +C      +EG +++ L   
Sbjct: 66  NLELRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSS 125

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
                 + +GNA+++M+ + G   +A  +F  +SER++ SW  L+ GY ++G   +A+N 
Sbjct: 126 SKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNL 185

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           +   L   I  +     +V+  C+  S++  G ++H   I+ G+ SDV +G AL+ +Y K
Sbjct: 186 YHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVK 245

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            GD+ +ARML D    +    +NA++SG+ E     E   + LFS  R   ++PD +T +
Sbjct: 246 CGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEG--LELFSMMRELSVDPDLITMT 303

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            + S          GR +H Y +K+ +  D+ + N+LI MY+  G ++ A  +F  +  +
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D+VSW AM+++   H L   A+  ++ M+ EG  PD+I+++ VL AC   G  + GI L 
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL- 422

Query: 589 NEIEQIYGL 597
           +EI    GL
Sbjct: 423 HEIAIKTGL 431



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 231/489 (47%), Gaps = 14/489 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  D+  G+ +HA +++ G ++D    N LI +Y K   +  A+ LFD M 
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMP 260

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  I+W ++I GY ++G     L +   M       +  T + +  AC LL++   G  
Sbjct: 261 KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRG 320

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H + +KS F  ++ +  SLI MY   G   EAE VF  +  KDV     MI        
Sbjct: 321 VHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKL 380

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A   +  +      P++ T  +V+S C     ++ G +LH +A+K G+V  + V N+
Sbjct: 381 PFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNS 440

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K    + A  +F  IS +N++SWT+LI G   +    +A+  F +  +  +  +
Sbjct: 441 LIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPN 499

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  L +V+  C+    L  G ++H  A++ G   D  L  A++D+Y + G    A   L+
Sbjct: 500 SVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA---LN 556

Query: 421 GFSC--KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            F+   K    +N +L+G+ ++     +  + LF +     + PD +TF  LL   +   
Sbjct: 557 QFNSQKKDVTAWNILLTGYAQQ--GQAKLAVELFDKMLELEIHPDEITFISLLCACSKSG 614

Query: 479 CLVRGRSLHAYSI---KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWN 534
            +  G  L  ++I   K     ++     ++ +  + G +D A+   + +  R D   W 
Sbjct: 615 MVTEG--LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWG 672

Query: 535 AMLSAYALH 543
           A+L+A  +H
Sbjct: 673 ALLNACRIH 681


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 210/647 (32%), Positives = 349/647 (53%), Gaps = 6/647 (0%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
            N L++++ +F  L  A  +F  M  R   +W  L+ GY   G ++  L +   M  +E 
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + N +T   +L+ C+ + D   G++IHA  I+ GFE++V VG +LI+MY   G    A  
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F  +  +D    N MI  Y + G       +F  +     +P+  T T V S C E L 
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC-ELLD 313

Query: 276 VEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
            E  G+ +HG  VK     +IS+ N+++ MY   G  EEAE +F  +  ++++SWTA+I+
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
             V      KA+  +      GI  D   L +V+  C+   +L+LG++LH  AIK G +S
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
            V +  +L+D+Y+K   + +A  +    S K    + +++ G   +I +   + ++ F Q
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGL--RINNRSFEALLFFRQ 491

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            +   M+P+ VT   +LS  A    L+RG+ +HA++++TG   D  + NA++ MY +CG 
Sbjct: 492 MK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGR 550

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
              A   F     +D+ +WN +L+ YA  G  K A+ LF++M      PD+I+ + +L A
Sbjct: 551 KVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCA 609

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C  SG+   G+  FN ++  Y L P L+H+AC+VD+LGRAG+L +A + I   P      
Sbjct: 610 CSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAA 669

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           +W  L++  ++  N +   +A+KR+ + + K  G +IL+ N+YAG G  D+ +KVR+ M 
Sbjct: 670 IWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMR 729

Query: 695 DLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +  LS + GCSW+EI  K+H F++    H +S+EI   LD    +MK
Sbjct: 730 ERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMK 776



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 252/504 (50%), Gaps = 9/504 (1%)

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V +G +L+SM+   G   +A  VF  ++ +DV   N ++  Y KAG  + A +++  +L 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           ++  PN YTF +V+  C     +  GK++H   ++FG   ++ VGNA++TMY K G    
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +FD + +R+ ISW A+ISGY  +G G + +  F    +L +  D   + TV   C +
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             N  LG  +HG+ +K  +  D+ +  +L+ +Y+  G L+ A  +      K    + A+
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++  +      +   +  +    L G+ PD +T   +LS  A    L  G  LH  +IKT
Sbjct: 372 IASLVSHKLPFK--AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT 429

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G  + VIV N+LI MY+KC  +D A ++F+ IS +++VSW +++    ++     ALL F
Sbjct: 430 GLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFF 489

Query: 554 EEMKREGFAPDDISILGVLQACIYSG-LSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
            +MK E   P+ ++++ VL AC   G L  G     + +    G    L +   ++D+  
Sbjct: 490 RQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN--AILDMYV 546

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE-PKDAGSFI 671
           R GR   A+N  NS    +    W  L++       +K ++    ++L+LE   D  +FI
Sbjct: 547 RCGRKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFI 604

Query: 672 LVSNMYAGQGMLDEAAKVRTTMND 695
            +    +  GM+ E  +    M +
Sbjct: 605 SLLCACSKSGMVTEGLEYFNIMKN 628



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 190/369 (51%), Gaps = 3/369 (0%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N  + E    G  E A      +L    E  +  +  ++ +C      +EG +++ L   
Sbjct: 66  NLELRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSS 125

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
                 + +GNA+++M+ + G   +A  +F  +SER++ SW  L+ GY ++G   +A+N 
Sbjct: 126 SKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNL 185

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           +   L   I  +     +V+  C+  S++  G ++H   I+ G+ SDV +G AL+ +Y K
Sbjct: 186 YHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVK 245

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            GD+ +ARML D    +    +NA++SG+ E     E   + LFS  R   ++PD +T +
Sbjct: 246 CGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEG--LELFSMMRELSVDPDLITMT 303

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            + S          GR +H Y +K+ +  D+ + N+LI MY+  G ++ A  +F  +  +
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D+VSW AM+++   H L   A+  ++ M+ EG  PD+I+++ VL AC   G  + GI L 
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL- 422

Query: 589 NEIEQIYGL 597
           +EI    GL
Sbjct: 423 HEIAIKTGL 431



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 231/489 (47%), Gaps = 14/489 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  D+  G+ +HA +++ G ++D    N LI +Y K   +  A+ LFD M 
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMP 260

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  I+W ++I GY ++G     L +   M       +  T + +  AC LL++   G  
Sbjct: 261 KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRG 320

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H + +KS F  ++ +  SLI MY   G   EAE VF  +  KDV     MI        
Sbjct: 321 VHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKL 380

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A   +  +      P++ T  +V+S C     ++ G +LH +A+K G+V  + V N+
Sbjct: 381 PFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNS 440

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K    + A  +F  IS +N++SWT+LI G   +    +A+  F +  +  +  +
Sbjct: 441 LIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPN 499

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  L +V+  C+    L  G ++H  A++ G   D  L  A++D+Y + G    A   L+
Sbjct: 500 SVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA---LN 556

Query: 421 GFSC--KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            F+   K    +N +L+G+ ++     +  + LF +     + PD +TF  LL   +   
Sbjct: 557 QFNSQKKDVTAWNILLTGYAQQ--GQAKLAVELFDKMLELEIHPDEITFISLLCACSKSG 614

Query: 479 CLVRGRSLHAYSI---KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWN 534
            +  G  L  ++I   K     ++     ++ +  + G +D A+   + +  R D   W 
Sbjct: 615 MVTEG--LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWG 672

Query: 535 AMLSAYALH 543
           A+L+A  +H
Sbjct: 673 ALLNACRIH 681


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 219/665 (32%), Positives = 359/665 (53%), Gaps = 12/665 (1%)

Query: 86  KSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLG 145
           KSG   D + ++ L++ +A+F   D A+ +F+ M VR+ ++   L+ G +     E+   
Sbjct: 310 KSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 369

Query: 146 IACDMYRSEEKFNEHTCSVILEACS----LLEDRIFGEQIHAFAIKSGF-ENNVFVGTSL 200
           +  +M +     N  +  V+L A S    L E R  G ++HA  I++G  +N V +G  L
Sbjct: 370 VFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGL 428

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           ++MY  SG   +A +VF  +  KD    N +I   ++   SE A   F  +  +   P++
Sbjct: 429 VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSN 488

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           +T  + +S C     +  G+Q+H   +K G+  ++SV NA++ +Y + G   E  ++F  
Sbjct: 489 FTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL 548

Query: 321 ISERNLISWTALISGYVRS-GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
           + E + +SW ++I     S     +A+  FL+ +  G          ++   S  S  E+
Sbjct: 549 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 608

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAILSGFM 438
             Q+H   +K+    D  +G AL+  Y K G++     +    S  +    +N+++SG++
Sbjct: 609 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 668

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
                 +   +V F  Q+  G   D  TF+ +LS  AS A L RG  +HA  I+    +D
Sbjct: 669 HNELLHKAMDLVWFMMQK--GQRLDSFTFATILSACASVATLERGMEVHACGIRACLESD 726

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           V+VG+AL+ MY+KCG ID A + F+ +  R++ SWN+M+S YA HG G+ AL LF  M  
Sbjct: 727 VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMML 786

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS 618
           +G  PD ++ +GVL AC + G  E G   F  + ++Y L P +EHF+CMVDLLGRAG+L 
Sbjct: 787 DGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 846

Query: 619 EAMNLINSSPFSESPLLWRTLVSVSKLM--ANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           E  + INS P   + L+WRT++         N++    A++ LL+LEP++A +++L++NM
Sbjct: 847 EVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANM 906

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA     ++ AK RT M +  + KEAGCSW+ +   +H FVA  K HPE + IY KL  L
Sbjct: 907 YASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLREL 966

Query: 737 NDEMK 741
           N +M+
Sbjct: 967 NRKMR 971



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 180/661 (27%), Positives = 308/661 (46%), Gaps = 56/661 (8%)

Query: 12  PPFKSQ--QSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISI 69
           PP KS   + L P +    +     + K+  ++ C+ +  S SE       +  L+    
Sbjct: 30  PPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSH-CNTTLFSSSE------TFESLINRYQ 82

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           GS   +  + +H   +K G   + F +N LIN+Y +   L  AQKLFD M  R+ +TW  
Sbjct: 83  GSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWAC 142

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC--SLLEDRIFGEQIHAFAIK 187
           LI GY  +G  +       DM R+    N +     L AC  S       G QIH    K
Sbjct: 143 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 202

Query: 188 SGFENNVFVGTSLISMYFHSGCF---REAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           + + ++V V   LISMY    C     +A +VF G+  ++    N +I  Y++ G++  A
Sbjct: 203 TRYGSDVVVCNVLISMY--GSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSA 260

Query: 245 FHVFVHL----LSSDFEPNDYTFTNVISVCYE--NLGVEEGKQLHGLAVKFGVVREISVG 298
           + +F  +    L   F+PN+YTF ++I+      + G+   +Q+     K G ++++ V 
Sbjct: 261 YDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVS 320

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GI 357
           +A+V+ + + G++++A+ +F+ +  RN++S   L+ G V+   G  A   F E  DL GI
Sbjct: 321 SALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGI 380

Query: 358 CCDSSCLATVIDGCSVCSNLE----LGLQLHGFAIKHGYLSD--VRLGTALVDIYAKGGD 411
             DS     ++   S  S LE     G ++H   I+ G L+D  V +G  LV++YAK G 
Sbjct: 381 NSDS--YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTG-LNDNKVAIGNGLVNMYAKSGA 437

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           +  A  + +    K +  +N+++SG  +   +  ED    F + R  G  P   T    L
Sbjct: 438 IADACSVFELMVEKDSVSWNSLISGLDQN--ECSEDAAESFHRMRRTGSMPSNFTLISTL 495

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           S  AS   ++ G  +H   +K G   DV V NAL+ +YA+ G      ++F  + + D V
Sbjct: 496 SSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQV 555

Query: 532 SWNAMLSAYA-LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           SWN+++ A +        A+  F +M R G+    ++ + +L A   S LS     L   
Sbjct: 556 SWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAV--SSLS-----LHEV 608

Query: 591 IEQIYGLRPILEHFACMVD----------LLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
             QI+ L  +L++  C+ D            G+ G ++E   +      +   + W +++
Sbjct: 609 SHQIHAL--VLKY--CLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 664

Query: 641 S 641
           S
Sbjct: 665 S 665



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 11/119 (9%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G  VHA  +++  ++D    + L+++Y+K  R+D A + F+ M +R+  +W S+I G
Sbjct: 708 LERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISG 767

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           Y   G  E  L +   M    +  +  T   +L ACS           H   ++ GFE+
Sbjct: 768 YARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACS-----------HVGFVEEGFEH 815


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 206/682 (30%), Positives = 365/682 (53%), Gaps = 4/682 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      D+  G  +H  ++K G  +  F AN+L+++YAK N +  A+KLFD M 
Sbjct: 13  FPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMN 72

Query: 121 VRS-AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            R+  ++W S+I  Y  +G     LG+  +M ++    N +T    L+AC     +  G 
Sbjct: 73  ERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGM 132

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IHA  +KS    +V+V  +L++M+   G    A  +F  L  KD    N MI  + + G
Sbjct: 133 EIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNG 192

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
               A   F  L  ++ +P++ +  ++++       +  GK++H  A+K  +   + +GN
Sbjct: 193 LYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGN 252

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            ++ MY K      A  +FD +  ++LISWT +I+ Y ++    +A+    +    G+  
Sbjct: 253 TLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDV 312

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D+  + + +  CS    L    ++HG+ +K G LSD+ +   ++D+YA  G++  A  + 
Sbjct: 313 DTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG-LSDLMMQNMIIDVYADCGNINYATRMF 371

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +   CK    + +++S ++     +E   + +F   +   +EPD +T   +LS +AS + 
Sbjct: 372 ESIKCKDVVSWTSMISCYVHNGLANE--ALGVFYLMKETSVEPDSITLVSILSAAASLSA 429

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L +G+ +H +  + G+  +    N+L+ MYA CGS++ A+++F     + +V W  M++A
Sbjct: 430 LNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINA 489

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y +HG GK A+ LF  M+ +   PD I+ L +L AC +SGL   G  L   ++  Y L P
Sbjct: 490 YGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEP 549

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             EH+AC+VDLLGRA  L EA + + S     +  +W   +   ++ +N K   +A+++L
Sbjct: 550 WPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKL 609

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           LDL+P   GS++L+SN++A  G   +  +VR  M    L K  GCSWIE+ +K+H F+  
Sbjct: 610 LDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVR 669

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
            K HPES +IY KL  + ++++
Sbjct: 670 DKSHPESYKIYQKLAQITEKLE 691



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 267/546 (48%), Gaps = 21/546 (3%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
           F+  T   +L+AC ++ED   G +IH   IK G+++ VFV  SL+SMY        A  +
Sbjct: 8   FDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKL 67

Query: 217 F-RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           F R     DV   N +I  Y+  G+   A  +F  +  +    N YT    +  C ++  
Sbjct: 68  FDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSF 127

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
            + G ++H   +K   V ++ V NA+V M+ + G    A R+FD + E++ I+W ++I+G
Sbjct: 128 KKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAG 187

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           + ++G   +A+  F    D  +  D   L +++        L  G ++H +A+K+   S+
Sbjct: 188 FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN 247

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           +R+G  L+D+Y+K   +  A ++ D    K    +  +++ + +     E   + L  + 
Sbjct: 248 LRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTE--ALKLLRKV 305

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           +  GM+ D +     L   +   CL   + +H Y++K G  +D+++ N +I +YA CG+I
Sbjct: 306 QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNI 364

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           + A ++F+ I  +D+VSW +M+S Y  +GL   AL +F  MK     PD I+++ +L A 
Sbjct: 365 NYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAA 424

Query: 576 IYSGLSEGGICLFNEIEQ-IYGLRPILE--HFACMVDLLGRAGRLSEAMNLINSSPFSES 632
                   G     EI   I+    +LE      +VD+    G L  A  +   +  S+S
Sbjct: 425 ASLSALNKG----KEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTR-SKS 479

Query: 633 PLLWRTLVSVSKLMANSK-----FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
            +LW T+++   +    K     FSI+  ++L+     D  +F+ +    +  G+++E  
Sbjct: 480 LVLWTTMINAYGMHGRGKAAVELFSIMEDQKLI----PDHITFLALLYACSHSGLINEGK 535

Query: 688 KVRTTM 693
           ++  TM
Sbjct: 536 RLLETM 541



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 173/408 (42%), Gaps = 8/408 (1%)

Query: 60  DWPQLVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           D   L+ I   SG L     G+ +HA+ +K+   ++    N LI++Y+K   +  A  +F
Sbjct: 212 DEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVF 271

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           D M+ +  I+WT++I  Y  +  +   L +   +       +       L ACS L    
Sbjct: 272 DKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLS 331

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
             +++H + +K G  +++ +   +I +Y   G    A  +F  +  KDV     MI  Y 
Sbjct: 332 HAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYV 390

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             G +  A  VF  +  +  EP+  T  +++S       + +GK++HG   + G + E S
Sbjct: 391 HNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGS 450

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
             N++V MY   G  E A ++F     ++L+ WT +I+ Y   G G  A+  F    D  
Sbjct: 451 TVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQK 510

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           +  D      ++  CS    +  G + L     K+           LVD+  +   L+ A
Sbjct: 511 LIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEA 570

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
              +     + TAE   +   F+          +   + Q+L  ++PD
Sbjct: 571 YHFVKSMQIEPTAE---VWCAFLGACRIHSNKKLGEIAAQKLLDLDPD 615



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 3/221 (1%)

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
           LG+  DS     V+  C V  ++  G ++HG  IK GY S V +  +LV +YAK  D+  
Sbjct: 4   LGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILG 63

Query: 415 ARMLLDGFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           AR L D  + +     +N+I+S +   +     + + LF + + AG+  +  T    L  
Sbjct: 64  ARKLFDRMNERNDVVSWNSIISAY--SLNGQCMEALGLFREMQKAGVGANTYTLVAALQA 121

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
               +    G  +HA  +K+    DV V NAL+ M+ + G +  A +IF  + ++D ++W
Sbjct: 122 CEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITW 181

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           N+M++ +  +GL   AL  F  ++     PD++S++ +L A
Sbjct: 182 NSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAA 222



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 1/131 (0%)

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           R+ G+  D  TF  +L        + RG  +H   IK GY + V V N+L++MYAKC  I
Sbjct: 2   RVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDI 61

Query: 516 DGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
            GA ++F  +++R D+VSWN+++SAY+L+G    AL LF EM++ G   +  +++  LQA
Sbjct: 62  LGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQA 121

Query: 575 CIYSGLSEGGI 585
           C  S   + G+
Sbjct: 122 CEDSSFKKLGM 132


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 208/644 (32%), Positives = 337/644 (52%), Gaps = 31/644 (4%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D    N +I  YA   RL+ A+KLF    +RS ITW+SLI GY   G     L +  +M 
Sbjct: 71  DECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQ 130

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
              E+ N+ T   +L  CS+      G+QIHA AIK+ F++N FV T L+ MY    C  
Sbjct: 131 YEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCIL 190

Query: 212 EAENVFRGLAYKDVRCV-NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           EAE +F     K    +   M+  Y++ G+   A   F  +     E N +TF ++++ C
Sbjct: 191 EAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTAC 250

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
                   G Q+HG  V+ G    + VG+A+V MY K G    A RM + +   + +SW 
Sbjct: 251 GSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWN 310

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           ++I G VR G G +A++ F       +  D     +V++  S   ++   + +H   +K 
Sbjct: 311 SMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKT 370

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G+ +   +  ALVD+YAK G    A  + +  + K    + ++++G +       E+ + 
Sbjct: 371 GFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN--GSYEEALR 428

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           LF + R+ G+ PD +  + +LS  A    L  G+ +HA  +K+G  + + V N+L++MYA
Sbjct: 429 LFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYA 488

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG I+ A ++F  +  +D+++W A++  YA +G G+                       
Sbjct: 489 KCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD---------------------- 526

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
                 ++GL E G   F  +E++YG++P  EH+ACM+DLLGR+G+L EA  L+N     
Sbjct: 527 ------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQ 580

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
               +W+ L++  ++  N +    A+  L +LEPK+A  ++L+SN+Y+  G  +EAAK R
Sbjct: 581 PDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTR 640

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
             M    +SKE GCSWIE+ SK+H F++  + HP + EIYSK+D
Sbjct: 641 RLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVD 684



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 212/433 (48%), Gaps = 7/433 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD-GM 119
           W  ++++      L+ G+ +HA  +K+   ++ F    L+++YAK   +  A+ LF+   
Sbjct: 141 WGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAP 200

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             R+ + WT+++ GY  +GD    +    DM     + N+ T   IL AC  +    FG 
Sbjct: 201 DKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGA 260

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           Q+H   ++SGF  NVFVG++L+ MY   G    A  +   +   D    N MI+   + G
Sbjct: 261 QVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQG 320

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             E A  +F  +     + +++T+ +V++     + +     +H L VK G      V N
Sbjct: 321 LGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNN 380

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+V MY K G  + A  +F+ ++++++ISWT+L++G V +G   +A+  F E   +GI  
Sbjct: 381 ALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHP 440

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   +A V+  C+  + LE G Q+H   +K G  S + +  +LV +YAK G ++ A  + 
Sbjct: 441 DQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVF 500

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMV------LFSQQRLAGMEPDPVTFSRLLSL 473
           D    +    + A++ G+ +     +   +V        S + + G++P P  ++ ++ L
Sbjct: 501 DSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDL 560

Query: 474 SASQACLVRGRSL 486
                 L+  + L
Sbjct: 561 LGRSGKLMEAKEL 573



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 153/345 (44%), Gaps = 36/345 (10%)

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           YTF+    VC++    E    +       G V   S  N +++   K G  ++A ++FD 
Sbjct: 9   YTFSR--KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDV 66

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEF----------LDLGIC---CDSSCL--- 364
           + +R+  SW  +I  Y  SG   +A   F E           L  G C   CD   L   
Sbjct: 67  MPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELF 126

Query: 365 ---------------ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
                           +V+  CS+   LE G Q+H  AIK  + S+  + T LVD+YAK 
Sbjct: 127 WEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKC 186

Query: 410 GDLKSARMLLDGFSCKYT-AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
             +  A  L +    K     + A+++G+ +    D    +  F   R  G+E +  TF 
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQN--GDGHKAIECFRDMRGEGIECNQFTFP 244

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L+   S +    G  +H   +++G+ A+V VG+AL+ MY+KCG +  A ++ + +   
Sbjct: 245 SILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVD 304

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           D VSWN+M+      GLG+ AL LF  M       D+ +   VL 
Sbjct: 305 DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLN 349


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 214/731 (29%), Positives = 359/731 (49%), Gaps = 73/731 (9%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           + + + +HA L+  G ++  F  N+L+N+Y+    +  A ++F G++  +  +W ++I G
Sbjct: 20  IPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISG 79

Query: 134 YLDDGDYESVLGIACDMYRSEE---------KFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           + D G       +   M   +           F+       ++A   L       Q+H F
Sbjct: 80  FADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGF 139

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           A K  F  +  V TS++ MY   G    A+ VF       + C N MI  Y+K G  + A
Sbjct: 140 AEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKA 199

Query: 245 FHVFVHLLSSD-------------------------------FEPNDYTFTNVISVCYEN 273
             +F  +   D                               F PN  T+ +V+S C   
Sbjct: 200 LELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSI 259

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             +E G  LH   V+     ++  G  ++ MY K G  E A ++FD ++E N +SWT+LI
Sbjct: 260 YDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLI 319

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
            G  ++G   +A+  F +  ++ +  D   LATV+  C    ++ +G QLH   I  G  
Sbjct: 320 GGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLD 379

Query: 394 SDVRLGTALVDIYAK-------------------------------GGDLKSARMLLDGF 422
           S V +  ALV +YAK                                GD++ AR   D  
Sbjct: 380 SSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKM 439

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             +    +N++L+ +M++     E+ + ++ Q    G++ D +TFS  +S  A  A L+ 
Sbjct: 440 PERNVISWNSMLATYMQR--GYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLIL 497

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G  + A + K G++++V V N+++TMY++CG I+ A ++F  I  +++VSWNAM++ YA 
Sbjct: 498 GNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQ 557

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           +G G+  + +FE+M   G  PD IS + VL  C +SG    G   F  + + +G+ P+ E
Sbjct: 558 NGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSE 617

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           HF CMVDLLGRAG+L +A NLIN  PF  +  +W  L++  ++  N+K + LA K LL+L
Sbjct: 618 HFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLEL 677

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           + +  GS+ L++N+Y+  G +     VR  M D  + K  GCSWIE+D+++H F     +
Sbjct: 678 DAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTN 737

Query: 723 HPESEEIYSKL 733
           HP+ ++++  L
Sbjct: 738 HPQIKDVHRML 748



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 252/557 (45%), Gaps = 89/557 (15%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           ++ C+ L       ++HA  I  G ++++F+   L++MY + G   +A  VF G+ + +V
Sbjct: 11  MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE------- 278
              N MI  +  +G+   A  +F  +   D      ++ +++S  + N  +E        
Sbjct: 71  YSWNTMISGFADSGQMREAEKLFEKMPERD----SVSWNSMMSGYFHNGELEATIKASGS 126

Query: 279 ------GKQLHGLAVKF----GVVREISV---------------------------GNAI 301
                   QLHG A KF        E SV                            N++
Sbjct: 127 LGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSM 186

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           +  Y K+G  ++A  +F  + ER+ +SW  +IS   + G G + +N FLE  + G   +S
Sbjct: 187 IYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNS 246

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
              A+V+  C+   +LE G  LH   ++     DV  G  L+D+YAK G L+SAR + DG
Sbjct: 247 MTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDG 306

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            +      + +++ G  +  A  +E+ +VLF+Q R   +  D  T + +L +  SQ  + 
Sbjct: 307 LTEHNAVSWTSLIGGVAQ--AGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDIS 364

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI---DGAFQI----------------- 521
            G  LHA++I  G  + V V NAL+TMYAKCG +   + AF++                 
Sbjct: 365 IGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFS 424

Query: 522 -----------FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
                      F  + +R+++SWN+ML+ Y   G  +  L ++ +M REG   D I+   
Sbjct: 425 QAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFST 484

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
            + AC    +   G  +  + E++ G    +     +V +  R G++ EA  + +S    
Sbjct: 485 SISACADLAVLILGNQILAQAEKL-GFSSNVSVANSVVTMYSRCGQIEEAQKMFSS---- 539

Query: 631 ESPLLWRTLVSVSKLMA 647
              ++ + LVS + +MA
Sbjct: 540 ---IVMKNLVSWNAMMA 553



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 188/389 (48%), Gaps = 34/389 (8%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+ G  +HA +++     D +    LI++YAK  RL+ A+++FDG+   +A++WTSLI 
Sbjct: 261 DLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIG 320

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G    G  E  L +   M       ++ T + +L  C   +D   GEQ+HA  I  G ++
Sbjct: 321 GVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDS 380

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA-------- 244
           +V V  +L++MY   G   +A + F  +  +D+     MI  +++AG+ E A        
Sbjct: 381 SVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMP 440

Query: 245 -----------------------FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
                                    V++ +L    + +  TF+  IS C +   +  G Q
Sbjct: 441 ERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQ 500

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +   A K G    +SV N++VTMY + G  EEA++MF +I  +NL+SW A+++GY ++G 
Sbjct: 501 ILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQ 560

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK--HGYLSDVRLG 399
           G K I  F + L++G   D     +V+ GCS    +  G Q +  ++   HG        
Sbjct: 561 GRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEG-QYYFLSMTKDHGISPMSEHF 619

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             +VD+  + G L+ A+ L++    K  A
Sbjct: 620 VCMVDLLGRAGQLEQAKNLINQMPFKPNA 648



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/564 (23%), Positives = 236/564 (41%), Gaps = 71/564 (12%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K S   G LKL   +H F  K     DT    +++++Y K   +D AQK+F      S 
Sbjct: 121 IKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSL 180

Query: 125 ITWTSLIKGYLDDGDYESVLGIAC-------------------------------DMYRS 153
             W S+I GY   G  +  L +                                 +M+  
Sbjct: 181 FCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQ 240

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
             + N  T + +L AC+ + D  +G  +HA  ++     +V+ G  LI MY   G    A
Sbjct: 241 GFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESA 300

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
             VF GL   +      +I    +AG  E A  +F  +       + +T   V+ VC   
Sbjct: 301 RQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQ 360

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-------------------------- 307
             +  G+QLH   +  G+   + V NA+VTMY K                          
Sbjct: 361 KDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMI 420

Query: 308 -----HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
                 G  E+A   FD + ERN+ISW ++++ Y++ G+  + +  +++ L  G+  D  
Sbjct: 421 TAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWI 480

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
             +T I  C+  + L LG Q+   A K G+ S+V +  ++V +Y++ G ++ A+ +    
Sbjct: 481 TFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI 540

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    +NA+++G+ +        V+ +F +    G  PD +++  +LS   S +  V 
Sbjct: 541 VMKNLVSWNAMMAGYAQN--GQGRKVIEIFEKMLNIGNVPDQISYVSVLS-GCSHSGFVS 597

Query: 483 GRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSA 539
               +  S+   +    +  +   ++ +  + G ++ A  +   +  + +   W A+L+A
Sbjct: 598 EGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAA 657

Query: 540 YALHGLGKGALLLFE---EMKREG 560
             +HG  K A L  +   E+  EG
Sbjct: 658 CRIHGNTKLAELAVKNLLELDAEG 681


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 216/696 (31%), Positives = 380/696 (54%), Gaps = 13/696 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K+S    D   G+ +H   +K G  +D     +L++ Y K +     +K+FD M  R+
Sbjct: 99  VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE--QI 181
            +TWT+LI GY  +   + VL +   M     + N  T +  L    L E+ + G   Q+
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV--LAEEGVGGRGLQV 216

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   +K+G +  + V  SLI++Y   G  R+A  +F     K V   N MI  Y   G  
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A  +F  +  +    ++ +F +VI +C     +   +QLH   VK+G + + ++  A+
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336

Query: 302 VTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +  Y K     +A R+F  I    N++SWTA+ISG++++    +A++ F E    G+  +
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPN 396

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               + ++    V S  E+    H   +K  Y     +GTAL+D Y K G ++ A  +  
Sbjct: 397 EFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL-SASQAC 479
           G   K    ++A+L+G+ +    + E  + +F +    G++P+  TFS +L++ +A+ A 
Sbjct: 453 GIDDKDIVAWSAMLAGYAQ--TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           + +G+  H ++IK+   + + V +AL+TMYAK G+I+ A ++FK   ++D+VSWN+M+S 
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           YA HG    AL +F+EMK+     D ++ +GV  AC ++GL E G   F+ + +   + P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             EH +CMVDL  RAG+L +AM +I + P      +WRT+++  ++   ++   LA++++
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           + ++P+D+ +++L+SNMYA  G   E AKVR  MN+  + KE G SWIE+ +K + F+A 
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 750

Query: 720 GKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
            + HP  ++IY KL+ L+  +K L  +  +++ LQD
Sbjct: 751 DRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQD 786



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 243/478 (50%), Gaps = 7/478 (1%)

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL 166
           +RL  A  LFD    R   ++ SL+ G+  DG  +    +  +++R   + +    S +L
Sbjct: 41  SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100

Query: 167 EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR 226
           +  + L D +FG Q+H   IK GF ++V VGTSL+  Y     F++   VF  +  ++V 
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
               +I  Y +   ++    +F+ + +   +PN +TF   + V  E      G Q+H + 
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI 346
           VK G+ + I V N+++ +Y K G   +A  +FD    +++++W ++ISGY  +G   +A+
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
             F       +    S  A+VI  C+    L    QLH   +K+G+L D  + TAL+  Y
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340

Query: 407 AKGGDLKSARMLLDGFSC-KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           +K   +  A  L     C      + A++SGF++   D +E+ + LFS+ +  G+ P+  
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN--DGKEEAVDLFSEMKRKGVRPNEF 398

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T+S +L+       ++    +HA  +KT Y     VG AL+  Y K G ++ A ++F GI
Sbjct: 399 TYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            D+DIV+W+AML+ YA  G  + A+ +F E+ + G  P++ +   +L  C  +  S G
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 512



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 8/247 (3%)

Query: 399 GTALVDIYAKG----GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           G A V IY  G      L +A  L D    +    + ++L GF  +    +E   +  + 
Sbjct: 26  GVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGF-SRDGRTQEAKRLFLNI 84

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            RL GME D   FS +L +SA+    + GR LH   IK G+  DV VG +L+  Y K  +
Sbjct: 85  HRL-GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
                ++F  + +R++V+W  ++S YA + +    L LF  M+ EG  P+  +    L  
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV 203

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
               G+   G+ +   + +  GL   +     +++L  + G + +A  L + +   +S +
Sbjct: 204 LAEEGVGGRGLQVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVV 261

Query: 635 LWRTLVS 641
            W +++S
Sbjct: 262 TWNSMIS 268


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 198/667 (29%), Positives = 364/667 (54%), Gaps = 5/667 (0%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            GQ +HA  +K G   + F  ++LINLY K   +  A+K+FD    ++ + W +++ G++ 
Sbjct: 346  GQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQ 405

Query: 137  DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            +   E  + +   M R++ + ++ T   +L AC  L+    G Q+H   IK+  + ++FV
Sbjct: 406  NDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFV 465

Query: 197  GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              +++ MY   G    A+ +F  +  KD    N +I+      E E A ++   +     
Sbjct: 466  ANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGI 525

Query: 257  EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
             P++ +F   I+ C      E GKQ+H  ++K+ V    +VG++++ +Y K G  E + +
Sbjct: 526  APDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRK 585

Query: 317  MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            +   +   +++   ALI+G V++    +AI  F + L  G    +   A+++ GC+   +
Sbjct: 586  VLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVS 645

Query: 377  LELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSA-RMLLDGFSCKYTAEFNAIL 434
              +G Q+H + +K   L+ D  LG +LV IY K   L+ A ++L +    K   E+ A +
Sbjct: 646  SVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATI 705

Query: 435  SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
            SG+ +    D+   +V+F + R   +  D  TF+ +L   +  A L  G+ +H   IK+G
Sbjct: 706  SGYAQNGYSDQS--LVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSG 763

Query: 495  YAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLF 553
            + +     +AL+ MY+KCG +  +F+IFK + ++ +I+ WN+M+  +A +G    ALLLF
Sbjct: 764  FVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLF 823

Query: 554  EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            ++M+     PD++++LGVL AC ++GL   G  LF+ + Q+YG+ P ++H+AC++DLLGR
Sbjct: 824  QKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGR 883

Query: 614  AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
             G L EA  +I+  PF    ++W T ++  ++  + +   +A+K+L+++EP+ + +++ +
Sbjct: 884  GGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFL 943

Query: 674  SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
            S+++A  G   EA   R  M +  + K  GCSWI + +K + FV     HP++  IY  L
Sbjct: 944  SSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKML 1003

Query: 734  DLLNDEM 740
            D L   M
Sbjct: 1004 DDLTGMM 1010



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 153/539 (28%), Positives = 271/539 (50%), Gaps = 11/539 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++      G  +   A+ + + K GS  D      +I+  A   RL  A+ L   + 
Sbjct: 229 WASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQ 288

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           + S + W ++I  Y   G    V G+  DM R        T + +L A + +     G+Q
Sbjct: 289 MPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQ 348

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA A+K G + NVFVG+SLI++Y   GC  +A+ VF     K++   N M+  + +   
Sbjct: 349 IHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDL 408

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E    +F ++  +D E +D+TF +V+  C     ++ G+Q+H + +K  +  ++ V NA
Sbjct: 409 QEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANA 468

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K G  + A+ +F  I  ++ +SW ALI G   +    +A+         GI  D
Sbjct: 469 MLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPD 528

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               AT I+ CS     E G Q+H  +IK+   S+  +G++L+D+Y+K GD++S+R +L 
Sbjct: 529 EVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLA 588

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                     NA+++G ++   + E++ + LF Q    G +P   TF+ +LS        
Sbjct: 589 HVDASSMVPINALITGLVQN--NREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSS 646

Query: 481 VRGRSLHAYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLS 538
           V G+ +H+Y++K+     D  +G +L+ +Y KC  ++ A ++   + D +++V W A +S
Sbjct: 647 VIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATIS 706

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            YA +G    +L++F  M+      D+ +   VL+AC     SE  I    + ++I+GL
Sbjct: 707 GYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKAC-----SE--IAALTDGKEIHGL 758



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 200/422 (47%), Gaps = 37/422 (8%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           +V+L ACS L     G Q+H   +KSGF ++ F    L+ MY      ++A  VF G+A 
Sbjct: 164 AVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIAC 223

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
            D  C   MI  Y++ G  + A  +F  +      P+  T+  +IS              
Sbjct: 224 PDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIIST------------- 270

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
                             + +M    G   +A  +   I   + ++W A+IS Y +SG  
Sbjct: 271 ------------------LASM----GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLE 308

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +    + +    G+    S  A+++   +  +  + G Q+H  A+KHG  ++V +G++L
Sbjct: 309 SEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSL 368

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +++Y K G +  A+ + D  + K    +NA+L GF++   D +E+ + +F   R A +E 
Sbjct: 369 INLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQN--DLQEETIQMFQYMRRADLEA 426

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D  TF  +L    +   L  GR +H  +IK    AD+ V NA++ MY+K G+ID A  +F
Sbjct: 427 DDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALF 486

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             I  +D VSWNA++   A +   + A+ + + MK  G APD++S    + AC     +E
Sbjct: 487 SLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATE 546

Query: 583 GG 584
            G
Sbjct: 547 TG 548



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 12/217 (5%)

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L LGL L G           RLG ALVD+Y + G +  A   L   +    +   A    
Sbjct: 83  LRLGLPLRG-----------RLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVL 131

Query: 437 FMEKIADDEEDVMVLFSQQRLA-GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
                +    DV+  F + R + G  PD    + +LS  +    L +GR +H   +K+G+
Sbjct: 132 SCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGF 191

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +       L+ MYAKC  +  A ++F GI+  D + W +M++ Y   G  + AL LF  
Sbjct: 192 CSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSR 251

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           M++ G APD ++ + ++      G       L   I+
Sbjct: 252 MEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQ 288


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 209/679 (30%), Positives = 358/679 (52%), Gaps = 5/679 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VR 122
           ++K S   GD + G  VH   +K G    TF AN LI +YAK   LD A ++F+ M   R
Sbjct: 170 VLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGR 229

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
              +W S+I G L +G +   L +   M R+    N +T   +L+ C+ L     G ++H
Sbjct: 230 DVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELH 289

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A  +KSG E N+    +L+ MY   G    A  VFR +  KD    N M+  Y + G   
Sbjct: 290 AALLKSGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYA 348

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A      +L   F+P+     ++ S       +  GK++H  A+K  +  +  VGN ++
Sbjct: 349 EAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLM 408

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K    E +  +FD +  ++ ISWT +I+ Y +S    +A+  F E    GI  D  
Sbjct: 409 DMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPM 468

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            + ++++ CS    + L  QLH +AI++G L D+ +   ++DIY + G++  +  + +  
Sbjct: 469 MIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETV 527

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    + ++++ +      +E   +VLF++ +   ++PD V    +L      + L +
Sbjct: 528 EQKDIVTWTSMINCYANSGLLNE--ALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAK 585

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +H + I+  +  +  + ++L+ MY+ CGS+ GA ++F  +  +D+V W AM++A  +
Sbjct: 586 GKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGM 645

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG GK A+ LF+ M + G  PD +S L +L AC +S L   G C  + +   Y L P  E
Sbjct: 646 HGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQE 705

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+AC+VDLLGR+G+  EA   I S P     ++W +L+   ++  N + +++A+ RLL+L
Sbjct: 706 HYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLEL 765

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EP + G+++LVSN++A  G  + A +VR  +++  L K+  CSWIEI + +H F      
Sbjct: 766 EPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNS 825

Query: 723 HPESEEIYSKLDLLNDEMK 741
           H ++E I  KL  + + ++
Sbjct: 826 HRDAERINLKLAEITERLR 844



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 179/670 (26%), Positives = 319/670 (47%), Gaps = 43/670 (6%)

Query: 13  PFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFN----DWPQ----- 63
           P+K   + PP        + SP   + +  LC   ++  + R L         PQ     
Sbjct: 12  PYKKFSTTPP--------SISPPDPTSLKQLCKEGNLRQALRLLTSQTPGRSPPQEHYGW 63

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGS--QNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           ++ +      +  G  VHA  + +GS   +D F A  L+ +Y K  R+  A+ LFDGM  
Sbjct: 64  VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK---FNEHTCSVILEACSLLEDRIFG 178
           R+  +W +LI  YL  G     LG+   M  S       +  T + +L+A  +  D   G
Sbjct: 124 RTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCG 183

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNK 237
            ++H  A+K G + + FV  +LI+MY   G    A  VF  +   +DV   N MI    +
Sbjct: 184 CEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQ 243

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G    A  +F  +  +    N YT   V+ VC E   +  G++LH   +K G    I  
Sbjct: 244 NGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC 303

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA++ MY K G  + A R+F  I E++ ISW +++S YV++G   +AI    E L  G 
Sbjct: 304 -NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGF 362

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D +C+ ++         L  G ++H +AIK    SD ++G  L+D+Y K   ++ +  
Sbjct: 363 QPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAH 422

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +  I++ + +  +    + + +F + +  G++ DP+    +L   +  
Sbjct: 423 VFDRMRIKDHISWTTIITCYAQ--SSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGL 480

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             ++  + LH Y+I+ G   D++V N +I +Y +CG +  + ++F+ +  +DIV+W +M+
Sbjct: 481 ETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMI 539

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + YA  GL   AL+LF EM+     PD ++++ +L A        GG+    + ++++G 
Sbjct: 540 NCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAI-------GGLSSLAKGKEVHGF 592

Query: 598 RPILEHF-------ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
             I  +F       + +VD+    G LS A+ + N+    +  +LW  +++ + +  + K
Sbjct: 593 L-IRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDM-VLWTAMINATGMHGHGK 650

Query: 651 FSILASKRLL 660
            +I   KR+L
Sbjct: 651 QAIDLFKRML 660


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 194/605 (32%), Positives = 338/605 (55%), Gaps = 3/605 (0%)

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G  +  LGI   M     +        +L+ C+ L     G ++HA  +KSG + N ++ 
Sbjct: 26  GRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 85

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +L+SMY   G   +A  VF  +  +++     MI  +    ++  AF  +  +  +  +
Sbjct: 86  NTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCK 145

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+  TF ++++       ++ G+++H   V+ G+  E  VG ++V MY K G   +A  +
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD + E+N+++WT LI+GY + G    A+          +  +    A+++ GC+  + L
Sbjct: 206 FDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAAL 265

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           E G ++H + I+ GY  ++ +  +L+ +Y K G L+ AR L      +    + A+++G+
Sbjct: 266 EHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGY 325

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +    DE   + LF + +  G++PD +TF+ +L+  +S A L  G+ +H   +  GY  
Sbjct: 326 AQLGFHDE--AINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL 383

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY-ALHGLGKGALLLFEEM 556
           DV + +AL++MYAKCGS+D A  +F  +S+R++V+W A+++   A HG  + AL  F++M
Sbjct: 384 DVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQM 443

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K++G  PD ++   VL AC + GL E G   F  +   YG++P++EH++C VDLLGRAG 
Sbjct: 444 KKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGH 503

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L EA N+I S PF   P +W  L+S  ++ ++ +    A++ +L L+P D G+++ +S++
Sbjct: 504 LEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSI 563

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA  G  ++A KVR  M    + KE G SWIE+D K+H F    K HPESE+IY +L  L
Sbjct: 564 YAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKL 623

Query: 737 NDEMK 741
            +++K
Sbjct: 624 TEQIK 628



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 241/473 (50%), Gaps = 5/473 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VHA +LKSG Q + +  N L+++YAK   L  A+++FD +  R+ ++WT++I+ 
Sbjct: 63  LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEA 122

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           ++              M  +  K ++ T   +L A +  E    G+++H   +++G E  
Sbjct: 123 FVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELE 182

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             VGTSL+ MY   G   +A  +F  L  K+V     +I  Y + G+ ++A  +   +  
Sbjct: 183 PRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQ 242

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           ++  PN  TF +++  C     +E GK++H   ++ G  RE+ V N+++TMY K G  EE
Sbjct: 243 AEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEE 302

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++F  +  R++++WTA+++GY + G   +AIN F      GI  D     +V+  CS 
Sbjct: 303 ARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSS 362

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + L+ G ++H   +  GY  DV L +ALV +YAK G +  A ++ +  S +    + AI
Sbjct: 363 PAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAI 422

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++G   +     E  +  F Q +  G++PD VTF+ +LS       +  GR  H  S+  
Sbjct: 423 ITGCCAQHGRCRE-ALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYL 480

Query: 494 GYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
            Y    +V +    + +  + G ++ A  +   +      S W A+LSA  +H
Sbjct: 481 DYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVH 533


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 210/674 (31%), Positives = 352/674 (52%), Gaps = 5/674 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI-TWTS 129
           +  L+  + VH  +L  G + D     +LIN+Y        A+ +F+   +RS +  W S
Sbjct: 17  TKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNS 76

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           L+ GY  +  +   L +   +        +  T   +++A   L     G  IH   +KS
Sbjct: 77  LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKS 136

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G+  +V V +SL+ MY     F  +  VF  +  +DV   N +I  + ++GE+E A  +F
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             + SS FEPN  + T  IS C   L +E GK++H   VK G   +  V +A+V MYGK 
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              E A  +F  +  ++L++W ++I GYV  G     +      +  G     + L +++
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS   NL  G  +HG+ I+    +D+ +  +L+D+Y K G+   A  +          
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE 376

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N ++S ++     +    + ++ Q    G++PD VTF+ +L   +  A L +G+ +H 
Sbjct: 377 SWNVMISSYIS--VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL 434

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
              ++    D ++ +AL+ MY+KCG+   AF+IF  I  +D+VSW  M+SAY  HG  + 
Sbjct: 435 SISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPRE 494

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL  F+EM++ G  PD +++L VL AC ++GL + G+  F+++   YG+ PI+EH++CM+
Sbjct: 495 ALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMI 554

Query: 609 DLLGRAGRLSEAMNLINSSP-FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           D+LGRAGRL EA  +I  +P  S++  L  TL S   L          ++ L++  P DA
Sbjct: 555 DILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDA 614

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
            +++++ N+YA     D A +VR  M ++ L K+ GCSWIE+  K+ HF A  + H  +E
Sbjct: 615 STYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAE 674

Query: 728 EIYSKLDLLNDEMK 741
            +Y  L LL+  M+
Sbjct: 675 NVYECLALLSGHME 688



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 248/524 (47%), Gaps = 25/524 (4%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K     G   LG+ +H  ++KSG   D   A++L+ +YAKFN  + + ++FD M 
Sbjct: 110 FPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP 169

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R   +W ++I  +   G+ E  L +   M  S  + N  + +V + ACS L     G++
Sbjct: 170 ERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKE 229

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   +K GFE + +V ++L+ MY    C   A  VF+ +  K +   N MI  Y   G+
Sbjct: 230 IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD 289

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           S+    +   ++     P+  T T+++  C  +  +  GK +HG  ++  V  +I V  +
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCS 349

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G +  AE +F    +    SW  +IS Y+  G+  KA+  + + + +G+  D
Sbjct: 350 LIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPD 409

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLL 419
                +V+  CS  + LE G Q+H  +I    L +D  L +AL+D+Y+K G+ K A  + 
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIH-LSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    K    +  ++S +         + +  F + +  G++PD VT   +LS       
Sbjct: 469 NSIPKKDVVSWTVMISAYGSH--GQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGL 526

Query: 480 LVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVSWNA-- 535
           +  G    +  +++ Y  + I+ +   +I +  + G +  A++I +   +    S NA  
Sbjct: 527 IDEGLKFFS-QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE---TSDNAEL 582

Query: 536 ---MLSAYAL---HGLG-KGALLLFEEMKREGFAPDDISILGVL 572
              + SA  L   H LG + A LL E        PDD S   VL
Sbjct: 583 LSTLFSACCLHLEHSLGDRIARLLVENY------PDDASTYMVL 620


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 206/673 (30%), Positives = 362/673 (53%), Gaps = 6/673 (0%)

Query: 72   GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
             +L LG  VHA  +K G  ++ +  ++L+++Y+K  +++ A K+F+ +  R+ + W ++I
Sbjct: 341  ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMI 400

Query: 132  KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            +GY  +G+   V+ +  DM  S    ++ T + +L  C++  D   G Q H+  IK    
Sbjct: 401  RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLT 460

Query: 192  NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             N+FVG +L+ MY   G   +A  +F  +  +D    N +I  Y +      AF +F+ +
Sbjct: 461  KNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRM 520

Query: 252  LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             S     +     + +  C    G+ +GKQ+H L+VK G+ R +  G++++ MY K G+ 
Sbjct: 521  NSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGII 580

Query: 312  EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            E+A ++F ++ E +++S  ALI+GY ++ +  +A+  F E L  G+       AT+++ C
Sbjct: 581  EDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEAC 639

Query: 372  SVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSC-KYTAE 429
                +L LG Q HG  IK G+ S+   LG +L+ +Y     +  A  L    S  K    
Sbjct: 640  HKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVL 699

Query: 430  FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
            +  ++SG  +      E+ +  + + R  G  PD  TF  +L + +  + L  GR++H+ 
Sbjct: 700  WTGMMSGHSQN--GFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSL 757

Query: 490  SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKG 548
                 +  D +  N LI MYAKCG +  + Q+F  +  R ++VSWN++++ YA +G  + 
Sbjct: 758  IFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAED 817

Query: 549  ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
            AL +F+ M++    PD+I+ LGVL AC ++G    G  +F  +   YG+   ++H ACMV
Sbjct: 818  ALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMV 877

Query: 609  DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
            DLLGR G L EA + I +        LW +L+   ++  +     +A++RL++LEP+++ 
Sbjct: 878  DLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSS 937

Query: 669  SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            +++L+SN+YA QG  +EA  +R  M D  + K  G SWI++  + H F A  + H +  +
Sbjct: 938  AYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGK 997

Query: 729  IYSKLDLLNDEMK 741
            I   L+ L D MK
Sbjct: 998  IEMFLEDLYDLMK 1010



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 171/636 (26%), Positives = 305/636 (47%), Gaps = 22/636 (3%)

Query: 71  SGDLKLG---QAVHAF--LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
           SG +K G   +AV  F  +   G + D      +IN Y    +L  A+ LF  M     +
Sbjct: 234 SGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVV 293

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
            W  +I G+   G     +    +M +S  K    T   +L A  ++ +   G  +HA A
Sbjct: 294 AWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA 353

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           IK G  +N++VG+SL+SMY        A  VF  L  ++    N MI  Y   GES    
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVM 413

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +F+ + SS +  +D+TFT+++S C  +  +E G Q H + +K  + + + VGNA+V MY
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMY 473

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G  E+A ++F+ + +R+ +SW  +I GYV+  +  +A + F+     GI  D +CLA
Sbjct: 474 AKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLA 533

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           + +  C+    L  G Q+H  ++K G    +  G++L+D+Y+K G ++ AR +       
Sbjct: 534 STLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEW 593

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
                NA+++G+ +   ++ E+ +VLF +    G+ P  +TF+ ++        L  G  
Sbjct: 594 SVVSMNALIAGYSQ---NNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQ 650

Query: 486 LHAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALH 543
            H   IK G++++   +G +L+ +Y     +  A  +F  +S  + IV W  M+S ++ +
Sbjct: 651 FHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQN 710

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIEQ-IYGLRPIL 601
           G  + AL  ++EM+ +G  PD  + + VL+ C + S L EG       I   I+ L   L
Sbjct: 711 GFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREG-----RAIHSLIFHLAHDL 765

Query: 602 EHFA--CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASK 657
           +      ++D+  + G +  +  + +      + + W +L++       A     I  S 
Sbjct: 766 DELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           R   + P D  +F+ V    +  G + +  K+   M
Sbjct: 826 RQSHIMP-DEITFLGVLTACSHAGKVSDGRKIFEMM 860



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 156/579 (26%), Positives = 263/579 (45%), Gaps = 58/579 (10%)

Query: 57  LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           +F++ P  + ++     L++G+AVH+  L  G  ++    N +++LYAK  ++  A+K F
Sbjct: 64  VFDEMPHRLALA-----LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF 118

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           +  L +    W S++  Y   G    VL     ++ +    N+ T S++L   +   +  
Sbjct: 119 NS-LEKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVE 177

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           FG QIH   IK G E N + G +L+ MY       +A+ VF G+   +  C   +   Y 
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYV 237

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           KAG  E A  VF  +      P+   F  VI+                            
Sbjct: 238 KAGLPEEAVIVFERMRGEGHRPDHLAFVTVINT--------------------------- 270

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
                   Y   G  ++A  +F  +   ++++W  +ISG+ + G    AI  FL      
Sbjct: 271 --------YISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSS 322

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +    S L +V+    + +NL+LGL +H  AIK G  S++ +G++LV +Y+K   +++A 
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            + +    +    +NA++ G+      +   VM LF   + +G   D  TF+ LLS  A 
Sbjct: 383 KVFEALEERNDVLWNAMIRGYAHN--GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAV 440

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L  G   H+  IK     ++ VGNAL+ MYAKCG+++ A QIF+ + DRD VSWN +
Sbjct: 441 SHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTI 500

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQIY 595
           +  Y        A  LF  M   G   D   +   L+AC    GL +G        +Q++
Sbjct: 501 IGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQG--------KQVH 552

Query: 596 ------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
                 GL  +L   + ++D+  + G + +A  + +S P
Sbjct: 553 CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 213/478 (44%), Gaps = 50/478 (10%)

Query: 148 CDMYRSEEKFNE--HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYF 205
           C +++S + F+E  H  ++ L           G+ +H+ ++  G ++   +G +++ +Y 
Sbjct: 56  CKLFKSRKVFDEMPHRLALALR---------IGKAVHSKSLILGIDSEGRLGNAIVDLYA 106

Query: 206 HSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
                  AE  F  L  KDV   N M+  Y+  G+       FV L  +   PN +TF+ 
Sbjct: 107 KCAQVSYAEKQFNSLE-KDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSI 165

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
           V+S       VE G+Q+H   +K G+ R    G A+V MY K     +A+R+FD I + N
Sbjct: 166 VLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPN 225

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
            + WT L SGYV++G   +A+  F      G   D     TVI                 
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVI----------------- 268

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
                             + Y   G LK AR+L           +N ++SG  ++    E
Sbjct: 269 ------------------NTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGC--E 308

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
              +  F   R + ++    T   +LS     A L  G  +HA +IK G A+++ VG++L
Sbjct: 309 IVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSL 368

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           ++MY+KC  ++ A ++F+ + +R+ V WNAM+  YA +G     + LF +MK  G+  DD
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428

Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
            +   +L  C  S   E G   F+ I     L   L     +VD+  + G L +A  +
Sbjct: 429 FTFTSLLSTCAVSHDLEMG-SQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQI 485



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 21/316 (6%)

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L +G  +H  ++  G  S+ RLG A+VD+YAK   +  A    +      TA +N++LS 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEKDVTA-WNSMLS- 133

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
            M         V+  F       + P+  TFS +LS SA +  +  GR +H   IK G  
Sbjct: 134 -MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLE 192

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +   G AL+ MYAKC  +  A ++F GI D + V W  + S Y   GL + A+++FE M
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG- 615
           + EG  PD ++ + V+   I  G  +    LF E+       P +  +  M+   G+ G 
Sbjct: 253 RGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKRGC 307

Query: 616 ---RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
               +   +N+  SS  S    L   L ++  ++AN    ++     + L         L
Sbjct: 308 EIVAIEYFLNMRKSSVKSTRSTLGSVLSAIG-IVANLDLGLVVHAEAIKLG--------L 358

Query: 673 VSNMYAGQGMLDEAAK 688
            SN+Y G  ++   +K
Sbjct: 359 ASNIYVGSSLVSMYSK 374


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 194/585 (33%), Positives = 322/585 (55%), Gaps = 8/585 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+AC  +     G++IH F +K G + +VFVG +L+ MY    C   A  VF  +  +D
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V   + MI   ++  E +MA  +   +      P++    +++++  +   +  GK +H 
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219

Query: 285 LAVKFGVVREISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
             ++      + V    A++ MY K G    A ++F+ ++++ ++SWTA+I+G +RS   
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +    F+   +  I  +   + ++I  C     L+LG QLH + +++G+   + L TAL
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATAL 339

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y K  D+++AR L D    +    + A+LS + +    D+     LF Q R +G+ P
Sbjct: 340 VDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQ--AFNLFDQMRTSGVRP 397

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
             VT   LLSL A    L  G+ +H+Y  K     D I+  AL+ MYAKCG I+ A ++F
Sbjct: 398 TKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLF 457

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
                RDI  WNA+++ +A+HG G+ AL +F EM+R+G  P+DI+ +G+L AC ++GL  
Sbjct: 458 IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVT 517

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            G  LF ++   +GL P +EH+ CMVDLLGRAG L EA  +I S P   + ++W  LV+ 
Sbjct: 518 EGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 577

Query: 643 SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
            +L  N +   LA+ +LL++EP++ G  +L+SN+YA      +AA VR TM  + + KE 
Sbjct: 578 CRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEP 637

Query: 703 GCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDS 747
           G S IE++  +H F+   + HP+   I   L     EM+ K+ ++
Sbjct: 638 GHSVIEVNGTVHEFLMGDQSHPQIRRINEML----AEMRRKLNEA 678



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 242/489 (49%), Gaps = 12/489 (2%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K        +LG+ +H F+LK G   D F  N L+ +Y +   ++ A+ +FD M+ 
Sbjct: 98  PSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME 157

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  ++W+++I+    + +++  L +  +M   + + +E     ++   +   +   G+ +
Sbjct: 158 RDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAM 217

Query: 182 HAFAIKSGFENNVFVG----TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           HA+ I++   NN  +G    T+L+ MY   G    A  +F GL  K V     MI    +
Sbjct: 218 HAYVIRN--SNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIR 275

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           +   E    +F+ +   +  PN+ T  ++I  C     ++ GKQLH   ++ G    +++
Sbjct: 276 SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLAL 335

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             A+V MYGK      A  +FD+   R+++ WTA++S Y ++    +A N F +    G+
Sbjct: 336 ATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 395

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA-R 416
                 + +++  C+V   L+LG  +H +  K     D  L TALVD+YAK GD+ +A R
Sbjct: 396 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGR 455

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           + ++  S +    +NAI++GF   +    E+ + +F++    G++P+ +TF  LL   + 
Sbjct: 456 LFIEAIS-RDICMWNAIITGF--AMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH 512

Query: 477 QACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWN 534
              +  G+ L    + T G    +     ++ +  + G +D A ++ K +  + + + W 
Sbjct: 513 AGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 572

Query: 535 AMLSAYALH 543
           A+++A  LH
Sbjct: 573 ALVAACRLH 581



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 215/439 (48%), Gaps = 11/439 (2%)

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
           ++   +V+  C +    + GK++HG  +K G+ R++ VGNA++ MYG+    E A  +FD
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            + ER+++SW+ +I    R+     A+    E   + +      + ++++  +  +N+ +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213

Query: 380 GLQLHGFAIKHGYLSD--VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           G  +H + I++       V   TAL+D+YAK G L  AR L +G + K    + A+++G 
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           +   ++  E+   LF + +   + P+ +T   L+        L  G+ LHAY ++ G++ 
Sbjct: 274 IR--SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSV 331

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
            + +  AL+ MY KC  I  A  +F    +RD++ W AMLSAYA       A  LF++M+
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIE-QIYGLRPILEHFACMVDLLGRAGR 616
             G  P  ++I+ +L  C  +G  + G  + + I+ +   +  IL     +VD+  + G 
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN--TALVDMYAKCGD 449

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKL--MANSKFSILASKRLLDLEPKDAGSFILVS 674
           ++ A  L   +  S    +W  +++   +         I A      ++P D  +FI + 
Sbjct: 450 INAAGRLFIEA-ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDI-TFIGLL 507

Query: 675 NMYAGQGMLDEAAKVRTTM 693
           +  +  G++ E  K+   M
Sbjct: 508 HACSHAGLVTEGKKLFEKM 526


>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 212/646 (32%), Positives = 350/646 (54%), Gaps = 4/646 (0%)

Query: 93  TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL--DDGDYESVLGIACDM 150
           TF+ N+ +        L VA+++FD M  R  ++WT++IKGY+  ++ D   +L  A  +
Sbjct: 34  TFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRV 93

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
                  +    SV+L+AC    +  +GE +HA+A+K+   ++VFVG+SL+ MY   G  
Sbjct: 94  VDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKI 153

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
            ++  VF  + +++      +I     AG  +     F  + SS+   + +TF   +  C
Sbjct: 154 EKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKAC 213

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
                V+ GKQ+H   +  G    + V N++ TMY + G   +   +F+ +SER+++SWT
Sbjct: 214 AGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWT 273

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           +LI  Y R GH  KA+  F++  +  +  +    AT+   C+  S L  G QLH      
Sbjct: 274 SLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSL 333

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G    + +  +++ +Y+  G L SA +L  G  C+    ++ I+ G+ +  A   E+   
Sbjct: 334 GLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQ--AGFGEEAFK 391

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
            FS  R +G +P     + LLS+S + A L  GR +HA +   G   +  V + LI MY+
Sbjct: 392 YFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYS 451

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG+I  A +IF+     DIVS  AM++ YA HG  K A+ LFE+  + GF+PD ++ + 
Sbjct: 452 KCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFIS 511

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC +SG  + G   FN +++ Y +RP  EH+ CMVDLL RAGRLSEA  +I+   + 
Sbjct: 512 VLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWK 571

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
           +  ++W TL+   K   + +    A++R+L+L+P  A + + ++N+Y+  G L+EAA VR
Sbjct: 572 KDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVR 631

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
             M    + KE G S I+I   +  FV+  + HP SE+IY+ L+L+
Sbjct: 632 KNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPLSEDIYNILELV 677



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 207/402 (51%), Gaps = 2/402 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S ++  G+++HA+ +K+   +  F  ++L+++Y +  +++ + ++F  M  R+A+TWT++
Sbjct: 115 SSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAI 174

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G +  G Y+  L    +M  SEE  +  T ++ L+AC+ L    +G+QIH   I  GF
Sbjct: 175 ITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGF 234

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           +  V+V  SL +MY   G  R+   +F  ++ +DV     +I+ YN+ G  E A   F+ 
Sbjct: 235 DATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIK 294

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + +S   PN+ TF  + S C     +  G+QLH      G+   +SV N+++ MY   G 
Sbjct: 295 MRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGK 354

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            + A  +F  +  R++ISW+ +I GY ++G G +A   F      G       LA+++  
Sbjct: 355 LDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSV 414

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
               + LE G Q+H  A   G   +  + + L+++Y+K G++K A  + +          
Sbjct: 415 SGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSL 474

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            A+++G+ E      ++ + LF +    G  PD VTF  +L+
Sbjct: 475 TAMINGYAEH--GKSKEAIDLFEKSLKVGFSPDSVTFISVLT 514



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 178/364 (48%), Gaps = 5/364 (1%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K   G   +K G+ +H  ++  G     + AN+L  +Y +   +     LF+ M  R  
Sbjct: 210 LKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDV 269

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WTSLI  Y   G  E  +     M  S+   NE T + +  AC+ L   ++GEQ+H  
Sbjct: 270 VSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCN 329

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
               G  +++ V  S++ MY   G    A  +F+G+  +D+   + +I  Y++AG  E A
Sbjct: 330 VFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEA 389

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F  F  +  S  +P D+   +++SV      +E G+Q+H LA  FG+ +  +V + ++ M
Sbjct: 390 FKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINM 449

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  +EA ++F+     +++S TA+I+GY   G   +AI+ F + L +G   DS   
Sbjct: 450 YSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTF 509

Query: 365 ATVIDGCSVCSNLELGLQLHGFAI---KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
            +V+  C+    L+LG   H F +   K+           +VD+  + G L  A  ++D 
Sbjct: 510 ISVLTACTHSGQLDLG--FHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDE 567

Query: 422 FSCK 425
            S K
Sbjct: 568 MSWK 571


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 209/672 (31%), Positives = 363/672 (54%), Gaps = 7/672 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K  +G  D++LG+AVH F LK+   +D F  N LI +Y KF  ++ A K+FD M  
Sbjct: 200 PCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQ 259

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFGE 179
           R+ ++W S++   L++G +E   G+   +   +E    +  T   ++  C+   +   G 
Sbjct: 260 RNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM 319

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
             H  A+K G    + V +SL+ MY   G   EA  +F     K+V   N MI  Y+K  
Sbjct: 320 VFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDR 378

Query: 240 ESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-V 297
           +   AF +   +   D  + N+ T  NV+ VC E +   + K++HG A++ G ++    V
Sbjct: 379 DFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELV 438

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA V  Y K G    AE +F  +  + + SW ALI G+V++G   KA++ +L     G+
Sbjct: 439 ANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGL 498

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   +A+++  C+   +L  G ++HG  +++G+  D  +  +LV +Y + G +  A++
Sbjct: 499 EPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKL 558

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
             D    K    +N +++GF +   +   D + +F Q   + + PD ++    L   +  
Sbjct: 559 FFDNMEEKNLVCWNTMINGFSQN--EFPFDALDMFHQMLSSKIWPDEISIIGALGACSQV 616

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           + L  G+ LH +++K+       V  +LI MYAKCG ++ +  IF  +  +  V+WN ++
Sbjct: 617 SALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLI 676

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y +HG G+ A+ LF+ M+  GF PD ++ + +L AC ++GL   G+    +++ ++G+
Sbjct: 677 TGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGI 736

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
           +P LEH+AC+VD+LGRAGRL+EA+ L+N  P      +W +L+S  +   +       + 
Sbjct: 737 KPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVAN 796

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +LL+L P  A +++L+SN YA  G  DE  K+R  M ++ L K+AGCSWIEI  K+  F+
Sbjct: 797 KLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFL 856

Query: 718 ASGKDHPESEEI 729
              +   +S +I
Sbjct: 857 VGDESLLQSMKI 868



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 175/682 (25%), Positives = 324/682 (47%), Gaps = 40/682 (5%)

Query: 73  DLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           ++++G+ +H F+  S   QND      L+ +Y+  +    +  +F+    ++   W +L+
Sbjct: 108 NIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALL 167

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GYL +  +   + +  +M    E   ++ T   +++AC  + D   GE +H FA+K+  
Sbjct: 168 SGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKV 227

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            ++VFVG +LI+MY   G    A  VF  +  +++   N ++    + G  E ++ +F  
Sbjct: 228 LSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKG 287

Query: 251 LLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           LL+ D    P+  T   VI +C     V  G   HGLA+K G+  E+ V ++++ MY K 
Sbjct: 288 LLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKC 347

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL--AT 366
           G   EA  +FD  +E+N+ISW ++I GY +     +   G  E L      D   +   T
Sbjct: 348 GYLCEARVLFDT-NEKNVISWNSMIGGYSKD----RDFRGAFELLRKMQMEDKVKVNEVT 402

Query: 367 VIDGCSVCSN----LELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDG 421
           +++   VC      L+L  ++HG+A++HG++ SD  +  A V  YAK G L  A  +  G
Sbjct: 403 LLNVLPVCEEEIQFLKLK-EIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCG 461

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K  + +NA++ G ++         + L+   R +G+EPD  T + LLS  A    L 
Sbjct: 462 MESKMVSSWNALIGGHVQN--GFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLS 519

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ +H   ++ G+  D  +  +L+++Y +CG I  A   F  + ++++V WN M++ ++
Sbjct: 520 CGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFS 579

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            +     AL +F +M      PD+ISI+G L AC  S +S   + L  E+        + 
Sbjct: 580 QNEFPFDALDMFHQMLSSKIWPDEISIIGALGAC--SQVS--ALRLGKELHCFAVKSHLT 635

Query: 602 EH--FAC-MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           EH    C ++D+  + G + ++ N+ +     +  + W  L++   +  + + +I   K 
Sbjct: 636 EHSFVTCSLIDMYAKCGCMEQSQNIFDRVHL-KGEVTWNVLITGYGIHGHGRKAIELFKS 694

Query: 659 LLD--LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           + +    P D+ +FI +       G++ E  +    M  L            I  KL H+
Sbjct: 695 MQNAGFRP-DSVTFIALLTACNHAGLVAEGLEYLGQMQSL----------FGIKPKLEHY 743

Query: 717 VASGKDHPESEEIYSKLDLLND 738
                    +  +   L+L+N+
Sbjct: 744 ACVVDMLGRAGRLNEALELVNE 765



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 227/432 (52%), Gaps = 7/432 (1%)

Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF-AIKSGFENNVFVGTSLISMYFHS 207
           D+  S     +    ++L+ C   ++   G +IH F +    F+N+V + T L++MY   
Sbjct: 83  DVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSIC 142

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNV 266
               ++  VF     K++   N ++  Y +      A  VFV ++S ++F P+++T   V
Sbjct: 143 DSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCV 202

Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           I  C     V  G+ +HG A+K  V+ ++ VGNA++ MYGK G  E A ++FD + +RNL
Sbjct: 203 IKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNL 262

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFL--DLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           +SW +++   + +G   ++   F   L  D G+  D + + TVI  C+    + LG+  H
Sbjct: 263 VSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFH 322

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
           G A+K G   ++++ ++L+D+Y+K G L  AR+L D    K    +N+++ G+  K  D 
Sbjct: 323 GLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGY-SKDRDF 380

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-AADVIVGN 503
                +L   Q    ++ + VT   +L +   +   ++ + +H Y+++ G+  +D +V N
Sbjct: 381 RGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVAN 440

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           A +  YAKCGS+  A  +F G+  + + SWNA++  +  +G  + AL L+  M+  G  P
Sbjct: 441 AFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEP 500

Query: 564 DDISILGVLQAC 575
           D  +I  +L AC
Sbjct: 501 DLFTIASLLSAC 512


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 202/604 (33%), Positives = 333/604 (55%), Gaps = 43/604 (7%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + N F   SLIS+   SG   EA  +F  +   D    N M+  + +    E +   FV 
Sbjct: 78  QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +   DF  N+Y+F + +S C   + +  G Q+H L  K     ++ +G+A++ MY K G 
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              AE +F  + ERNL++W +LI+ Y ++G   +A+  F+  +D G+  D   LA+V+  
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSA 257

Query: 371 CSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAK--------------------- 408
           C+    L+ GLQ+H   +K + +  D+ LG ALVD+YAK                     
Sbjct: 258 CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVS 317

Query: 409 ----------GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
                        +K+AR +    + +    +NA+++G+ +    + E+ + LF   +  
Sbjct: 318 ETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQN--GENEEALRLFRLLKRE 375

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA------ADVIVGNALITMYAKC 512
            + P   TF  LLS  A+ A L+ GR  H + +K G+       +D+ VGN+LI MY KC
Sbjct: 376 SIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKC 435

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           GSI+   ++F+ + +RD VSWNA++  YA +G G  AL +F +M   G  PD ++++GVL
Sbjct: 436 GSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVL 495

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC ++GL E G   F  +E+ +GL P+ +H+ CMVDLLGRAG L+EA NLI + P +  
Sbjct: 496 CACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPD 554

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
            ++W +L++  K+  N +    A+++LL+++P ++G ++L+SNMYA  G   +  +VR  
Sbjct: 555 AVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKL 614

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL--KVKDSSAF 750
           M    ++K+ GCSWIE++S++H F+   K HP  ++IYS L +L ++MK    + D++ F
Sbjct: 615 MRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDF 674

Query: 751 ELQD 754
           E  D
Sbjct: 675 EAYD 678



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 245/543 (45%), Gaps = 75/543 (13%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK-----GY 134
           VHA +L +    + F  N LI++Y K + LD A+KLFD M  R+  TW SLI      G+
Sbjct: 37  VHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGF 96

Query: 135 LDDG--------------------------DYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           LD+                            +E  L     M+R +   NE++    L A
Sbjct: 97  LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSA 156

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C+ L D   G Q+HA   KS +  +V++G++LI MY   G    AE VF G+  +++   
Sbjct: 157 CAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTW 216

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N +I  Y + G +  A  VFV ++ S  EP++ T  +V+S C     ++EG Q+H   VK
Sbjct: 217 NSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVK 276

Query: 289 FGVVR-EISVGNAIVTMYGKHGMSEEAERMFDAIS------------------------- 322
               R ++ +GNA+V MY K     EA R+FD +S                         
Sbjct: 277 TNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARF 336

Query: 323 ------ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
                 +RN++SW ALI+GY ++G   +A+  F       I         ++  C+  ++
Sbjct: 337 MFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLAD 396

Query: 377 LELGLQLH------GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           L LG Q H      GF  + G  SD+ +G +L+D+Y K G ++    + +    +    +
Sbjct: 397 LLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSW 456

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NAI+ G+ +     E   + +F +  + G +PD VT   +L   +    +  GR      
Sbjct: 457 NAIIVGYAQNGYGAE--ALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM 514

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LG 546
            + G          ++ +  + G ++ A  + + +  + D V W ++L+A  +HG   +G
Sbjct: 515 EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMG 574

Query: 547 KGA 549
           K A
Sbjct: 575 KHA 577



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 183/391 (46%), Gaps = 38/391 (9%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G  DL +G  VHA + KS    D +  + LI++Y+K   +  A+++F GM+ R+ +TW S
Sbjct: 159 GLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNS 218

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI  Y  +G     L +   M  S  + +E T + ++ AC+ L     G QIHA  +K+ 
Sbjct: 219 LITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTN 278

Query: 190 -FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD----------------VRCVNFM- 231
            F +++ +G +L+ MY       EA  VF  ++ ++                V+   FM 
Sbjct: 279 KFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMF 338

Query: 232 --------------ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
                         I  Y + GE+E A  +F  L      P  YTF N++S C     + 
Sbjct: 339 SKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLL 398

Query: 278 EGKQLH------GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
            G+Q H      G   + G   +I VGN+++ MY K G  E+  R+F+ + ER+ +SW A
Sbjct: 399 LGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNA 458

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           +I GY ++G+G +A+  F + L  G   D   +  V+  CS    +E G        +HG
Sbjct: 459 IIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHG 518

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +      T +VD+  + G L  A+ L++  
Sbjct: 519 LIPLKDHYTCMVDLLGRAGCLNEAKNLIEAM 549



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 176/396 (44%), Gaps = 68/396 (17%)

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           MA H  V  L   + PN   F  ++  C  +      + +H   +      EI + N ++
Sbjct: 1   MAKHGLVRDL---YLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLI 57

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +YGK    ++A ++FD + +RN  +W +LIS   +SG   +A   F    +   C  +S
Sbjct: 58  DVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNS 117

Query: 363 CLA-------------------------------TVIDGCSVCSNLELGLQLHGFAIKHG 391
            ++                               + +  C+   +L +G Q+H    K  
Sbjct: 118 MVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSR 177

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
           Y +DV +G+AL+D+Y+K G +  A  +  G   +    +N++++ + +     E   + +
Sbjct: 178 YSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASE--ALEV 235

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAADVIVGNALITMYA 510
           F +   +G+EPD VT + ++S  AS   L  G  +HA  +KT  +  D+++GNAL+ MYA
Sbjct: 236 FVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYA 295

Query: 511 KCGSIDGAFQIFKGIS-------------------------------DRDIVSWNAMLSA 539
           KC  ++ A ++F  +S                                R++VSWNA+++ 
Sbjct: 296 KCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAG 355

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           Y  +G  + AL LF  +KRE   P   +   +L AC
Sbjct: 356 YTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSAC 391



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 39/301 (12%)

Query: 74  LKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT------ 126
           LK G  +HA ++K+   ++D    N L+++YAK ++++ A+++FD M +R+ ++      
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVS 323

Query: 127 -------------------------WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
                                    W +LI GY  +G+ E  L +   + R       +T
Sbjct: 324 GYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYT 383

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFE------NNVFVGTSLISMYFHSGCFREAEN 215
              +L AC+ L D + G Q H   +K GFE      +++FVG SLI MY   G   +   
Sbjct: 384 FGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSR 443

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +  +D    N +I+ Y + G    A  +F  +L    +P+  T   V+  C     
Sbjct: 444 VFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGL 503

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
           VEEG+       + G++        +V + G+ G   EA+ + +A+    + + W +L++
Sbjct: 504 VEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLA 563

Query: 335 G 335
            
Sbjct: 564 A 564


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 200/676 (29%), Positives = 363/676 (53%), Gaps = 4/676 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++    G  D ++ +++H  +L  G  +D +  N LI++Y +FN LD A+K+F+ M 
Sbjct: 177 FPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 236

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           +R  ++W SLI GY  +G +   L I           + +T S +L AC  L     G+ 
Sbjct: 237 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI 296

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH    K G + +V V   L+SMY       +   +F  +  +D    N MI  Y++ G 
Sbjct: 297 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGL 356

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E +  +F+ +++  F+P+  T T+++  C     +E GK +H   +  G   + +  N 
Sbjct: 357 YEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI 415

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K G    ++ +F  +  ++ +SW ++I+ Y+++G   +A+  F + +   +  D
Sbjct: 416 LINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPD 474

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S     ++   +   +L LG +LH    K G+ S++ +   LVD+YAK G++  +  + +
Sbjct: 475 SVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFE 534

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               +    +N I++  +   ++D    + + S+ R  G+ PD  T   +L + +  A  
Sbjct: 535 NMKARDIITWNTIIASCVH--SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 592

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            +G+ +H    K G  +DV VGN LI MY+KCGS+  +FQ+FK +  +D+V+W A++SA 
Sbjct: 593 RQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISAC 652

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
            ++G GK A+  F EM+  G  PD ++ + ++ AC +SGL E G+  F+ +++ Y + P 
Sbjct: 653 GMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPR 712

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+AC+VDLL R+  L +A + I S P      +W  L+S  ++  +++ +   S+R++
Sbjct: 713 IEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERII 772

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L P D G ++LVSN+YA  G  D+   +R ++    L K+ GCSW+EI +K++ F    
Sbjct: 773 ELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGT 832

Query: 721 KDHPESEEIYSKLDLL 736
           K   + EE+   L +L
Sbjct: 833 KFSEQFEEVNKLLGML 848



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 276/583 (47%), Gaps = 15/583 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD-GMLVRSAITWTSLIKGYLD 136
             +H+ ++  G  +    +  LI  YA F     +  +F       +   W S+I+    
Sbjct: 92  HKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTH 151

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G +   L +  +  R   + + +T   ++ AC+ L D    + IH   +  GF +++++
Sbjct: 152 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYI 211

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G +LI MY       +A  VF  +  +DV   N +I  YN  G    A  ++    +   
Sbjct: 212 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 271

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ YT ++V+  C     VEEG  +HGL  K G+ +++ V N +++MY K     +  R
Sbjct: 272 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 331

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD +  R+ +SW  +I GY + G   ++I  F+E ++     D   + +++  C    +
Sbjct: 332 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGD 390

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           LE G  +H + I  GY  D      L+++YAK G+L +++ +  G  CK +  +N++++ 
Sbjct: 391 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 450

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           +++  + DE   M LF   +   ++PD VT+  LLS+S     L  G+ LH    K G+ 
Sbjct: 451 YIQNGSFDE--AMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFN 507

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           ++++V N L+ MYAKCG +  + ++F+ +  RDI++WN ++++          L +   M
Sbjct: 508 SNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRM 567

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGI----CLFNEIEQIYGLRPILEHFACMVDLLG 612
           + EG  PD  ++L +L  C        G     C+F       GL   +     ++++  
Sbjct: 568 RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK-----LGLESDVPVGNVLIEMYS 622

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           + G L  +  +      ++  + W  L+S   +    K ++ A
Sbjct: 623 KCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYGEGKKAVRA 664



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 15/182 (8%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           FS +    AS A   +   LH+  I  G    VI    LI  YA       +F +F+  S
Sbjct: 75  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134

Query: 527 -DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
              ++  WN+++ A   +GL   AL L+ E +R    PD  +   V+ AC        G+
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC-------AGL 187

Query: 586 CLFNEIEQIY------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
             F   + I+      G    L     ++D+  R   L +A  +    P  +  + W +L
Sbjct: 188 LDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDV-VSWNSL 246

Query: 640 VS 641
           +S
Sbjct: 247 IS 248


>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 221/678 (32%), Positives = 362/678 (53%), Gaps = 6/678 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++ G+++HA LLK G  + T   N++++ Y K   LD A  +FD M  R +++W  +I G
Sbjct: 65  VRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHG 124

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +L  G  +  L           + N  T  + + AC  L     G ++H + I+SGF + 
Sbjct: 125 HLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDI 184

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             V  SL+SMY  +   R AE +F  +  +DV   + MI  Y + GE++MA  +F+ + S
Sbjct: 185 PSVQNSLLSMYADNDMER-AEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTS 243

Query: 254 -SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +  E +  T  +V+  C     +  G+ +HG+ +  G+  ++ VGN+I+ MY K    E
Sbjct: 244 NASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHE 303

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A + F+ +  RN +SW ++ISG VR+    +A++ F      G   D   L  ++  C 
Sbjct: 304 SAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCK 363

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +      +H   I+ GY  +  +  +L+D Y+K   ++ A  L D    K T  ++A
Sbjct: 364 YFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSA 423

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++GF      DE   + LF +   A  +P+ VT   LL   +  A L R +  H  +I+
Sbjct: 424 MIAGFNHCGKPDE--AIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR 481

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G AA+V VG A++ MYAKCG I  + + F  I +++IVSW AM++A  ++GL + AL L
Sbjct: 482 RGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALAL 541

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
             EMK  G  P+ ++ L VL AC + GL E G+  F  + Q +G+ P LEH++CMVD+L 
Sbjct: 542 LSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLS 601

Query: 613 RAGRLSEAMNLINSSP--FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           RAG+L+ AMNLI   P    +   LW  L+S  +   NS+    A+ R+L+LEP+ +  +
Sbjct: 602 RAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGY 661

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
            L S+MYA  G+  +AA++R  +    +   AG S + ++ K   FVA  + HP + EI+
Sbjct: 662 FLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIW 721

Query: 731 SKLDLLNDEMKLKVKDSS 748
             ++ L+D MK+  ++ S
Sbjct: 722 GVVEQLHDCMKIAERNES 739



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 244/500 (48%), Gaps = 13/500 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G ++ G  +H ++++SG  +     N+L+++YA  N ++ A++LFD M  R  I+W+ +I
Sbjct: 164 GAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMI 222

Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GY+  G+ +  L +  +M  +   + +  T   +L+AC+   D   G  +H   I  G 
Sbjct: 223 GGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGL 282

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + ++FVG S+I MY        A   F  +  ++    N +I    +  +   A  +F  
Sbjct: 283 DYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYS 342

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  + F  ++ T  N++  C   +   + K +H + +++G      V N+++  Y K  +
Sbjct: 343 MGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDL 402

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A ++FD +  ++ +SW+A+I+G+   G   +AI  F E        +   + ++++ 
Sbjct: 403 IELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEA 462

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            SV ++L+     HG AI+ G  ++V +GTA++D+YAK G++  +R   D    K    +
Sbjct: 463 FSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSW 522

Query: 431 NAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
            A+++   M  +A    D + L S+ +L G++P+ VT   +LS  +    +  G S    
Sbjct: 523 GAMIAACGMNGLA---RDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFEN 579

Query: 490 SIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR---DIVSWNAMLSAYALHG- 544
            ++  G    +   + ++ M ++ G ++ A  + + + +R       W A+LSA    G 
Sbjct: 580 MVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGN 639

Query: 545 --LGKGALLLFEEMKREGFA 562
             LG GA     E++ +  A
Sbjct: 640 SRLGAGAAFRVLELEPQSSA 659



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 178/358 (49%), Gaps = 1/358 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    +GD+ +G++VH  ++  G   D F  N++I++Y+K +  + A K F+ M  R+
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRN 316

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W S+I G +    +   L +   M ++  + +E T   +L++C    D    + IH+
Sbjct: 317 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHS 376

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+ G+E N FV  SLI  Y        A  +F  L  KD    + MI  +N  G+ + 
Sbjct: 377 IVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDE 436

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +  +  +PN  T  +++     +  ++  K  HG+A++ G+  E++VG AI+ 
Sbjct: 437 AIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILD 496

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G    + + FD I E+N++SW A+I+    +G    A+    E    G+  +   
Sbjct: 497 MYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVT 556

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
             +V+  CS    +E GL      ++ HG    +   + +VD+ ++ G L SA  L++
Sbjct: 557 TLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIE 614



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 158/319 (49%), Gaps = 2/319 (0%)

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
            D T  + I     +L V  GK +H   +K G     S GN+++  Y K G  + A  +F
Sbjct: 48  TDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVF 107

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           D++  R+ +SW  +I G++  G   K +  F +   +    + S L   I  C     +E
Sbjct: 108 DSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAME 167

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
            GL++HG+ I+ G+L    +  +L+ +YA   D++ A  L D    +    ++ ++ G++
Sbjct: 168 EGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYV 226

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
           +   + +  + +       A +E D +T   +L   A+   +  GRS+H   I  G   D
Sbjct: 227 Q-TGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYD 285

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           + VGN++I MY+KC   + AF+ F  +  R+ VSWN+++S          AL LF  M +
Sbjct: 286 LFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGK 345

Query: 559 EGFAPDDISILGVLQACIY 577
            GF  D+++++ +LQ+C Y
Sbjct: 346 AGFRADEVTLVNLLQSCKY 364



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 452 FSQQRLAGME-PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           + Q + AG +  DP     +L  + S   +  G+S+HA  +K G+ +    GN+++  Y 
Sbjct: 37  YHQMKKAGAQLTDPTLVHSILK-ACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYM 95

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           K G++D A  +F  +  RD VSWN M+  +   G     L  F + +   F P+  +++ 
Sbjct: 96  KTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVL 155

Query: 571 VLQACIYSGLSEGGI 585
            + AC   G  E G+
Sbjct: 156 AIHACRSLGAMEEGL 170


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 205/695 (29%), Positives = 372/695 (53%), Gaps = 7/695 (1%)

Query: 45  SISSVSCSERTLLFND---WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLIN 101
           ++S  S ++R  L  D   +P ++    G  D ++ +++H  +L  G  +D +  N LI+
Sbjct: 99  ALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALID 158

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y +FN LD A+K+F+ M +R  ++W SLI GY  +G +   L I           + +T
Sbjct: 159 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYT 218

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
            S +L AC  L     G+ IH    K G + +V V   L+SMY       +   +F  + 
Sbjct: 219 MSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV 278

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            +D    N MI  Y++ G  E +  +F+ +++  F+P+  T T+++  C     +E GK 
Sbjct: 279 LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKY 337

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +H   +  G   + +  N ++ MY K G    ++ +F  +  ++ +SW ++I+ Y+++G 
Sbjct: 338 VHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGS 397

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             +A+  F + +   +  DS     ++   +   +L LG +LH    K G+ S++ +   
Sbjct: 398 FDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNT 456

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           LVD+YAK G++  +  + +    +    +N I++  +   ++D    + + S+ R  G+ 
Sbjct: 457 LVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVH--SEDCNLGLRMISRMRTEGVT 514

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           PD  T   +L + +  A   +G+ +H    K G  +DV VGN LI MY+KCGS+  +FQ+
Sbjct: 515 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQV 574

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           FK +  +D+V+W A++SA  ++G GK A+  F EM+  G  PD ++ + ++ AC +SGL 
Sbjct: 575 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 634

Query: 582 EGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           E G+  F+ +++ Y + P +EH+AC+VDLL R+  L +A + I S P      +W  L+S
Sbjct: 635 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 694

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
             ++  +++ +   S+R+++L P D G ++LVSN+YA  G  D+   +R ++    L K+
Sbjct: 695 ACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKD 754

Query: 702 AGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
            GCSW+EI +K++ F    K   + EE+   L +L
Sbjct: 755 PGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGML 789



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 276/583 (47%), Gaps = 15/583 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD-GMLVRSAITWTSLIKGYLD 136
             +H+ ++  G  +    +  LI  YA F     +  +F       +   W S+I+    
Sbjct: 33  HKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTH 92

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G +   L +  +  R   + + +T   ++ AC+ L D    + IH   +  GF +++++
Sbjct: 93  NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYI 152

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G +LI MY       +A  VF  +  +DV   N +I  YN  G    A  ++    +   
Sbjct: 153 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 212

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ YT ++V+  C     VEEG  +HGL  K G+ +++ V N +++MY K     +  R
Sbjct: 213 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 272

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD +  R+ +SW  +I GY + G   ++I  F+E ++     D   + +++  C    +
Sbjct: 273 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGD 331

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           LE G  +H + I  GY  D      L+++YAK G+L +++ +  G  CK +  +N++++ 
Sbjct: 332 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 391

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           +++  + DE   M LF   +   ++PD VT+  LLS+S     L  G+ LH    K G+ 
Sbjct: 392 YIQNGSFDE--AMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFN 448

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           ++++V N L+ MYAKCG +  + ++F+ +  RDI++WN ++++          L +   M
Sbjct: 449 SNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRM 508

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGI----CLFNEIEQIYGLRPILEHFACMVDLLG 612
           + EG  PD  ++L +L  C        G     C+F       GL   +     ++++  
Sbjct: 509 RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK-----LGLESDVPVGNVLIEMYS 563

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           + G L  +  +      ++  + W  L+S   +    K ++ A
Sbjct: 564 KCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYGEGKKAVRA 605



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 15/182 (8%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           FS +    AS A   +   LH+  I  G    VI    LI  YA       +F +F+  S
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75

Query: 527 -DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
              ++  WN+++ A   +GL   AL L+ E +R    PD  +   V+ AC        G+
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC-------AGL 128

Query: 586 CLFNEIEQIY------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
             F   + I+      G    L     ++D+  R   L +A  +    P  +  + W +L
Sbjct: 129 LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD-VVSWNSL 187

Query: 640 VS 641
           +S
Sbjct: 188 IS 189


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 210/662 (31%), Positives = 353/662 (53%), Gaps = 10/662 (1%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           LL      ++F  + +I+ Y K   L VA+++FD    R+ + WT++I  Y     +   
Sbjct: 65  LLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDA 124

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
             +  +M+RS  + +  T   +L  C+ LE      Q HA  +K G   N  V  +L+  
Sbjct: 125 FKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDS 184

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           YF +G    A  +F  +   D    N MI  Y   G +E A  +FV + +  F+P+D+TF
Sbjct: 185 YFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTF 244

Query: 264 TNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
             VIS    ++G+++   G+Q+HG  VK   +R + VGNA +  Y KH    E  ++F+ 
Sbjct: 245 AAVISA---SVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNE 301

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + E + +S+  +I+ Y   G   ++I+ F E         +    T++   +   +L++G
Sbjct: 302 MPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMG 361

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            QLH   +      D R+  +LVD+YAK G  + A  +    S + T  + A++S  +++
Sbjct: 362 RQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQR 421

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                E+ + LF + R A +  D  TF+ +L  SA+ A ++ G+ LH+  I++G+  +V 
Sbjct: 422 GL--HENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVY 478

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
            G AL+ MYA C SI  A + F+ +S+R++V+WNA+LSAYA +G GKG L  FEEM   G
Sbjct: 479 SGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSG 538

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
           + PD +S L +L AC +  L E G+  FN++  +Y L P  EH+  MVD L R+GR  EA
Sbjct: 539 YQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEA 598

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGSFILVSNMYAG 679
             L+   PF    ++W ++++  ++  N   +  A+ +L +++  +DA  ++ +SN++A 
Sbjct: 599 EKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAE 658

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE 739
            G  D   KV+  M D  + K    SW+EI  K+H F A+   HP+  EI  K+++L ++
Sbjct: 659 AGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQ 718

Query: 740 MK 741
           M+
Sbjct: 719 ME 720



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 240/491 (48%), Gaps = 12/491 (2%)

Query: 60  DWPQLVKISIGSGDLKLGQAV---HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           D+   + +  G  DL++ + +   HA ++K G   +    N L++ Y K   LD A++LF
Sbjct: 139 DYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLF 198

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
             M    ++++  +I GY ++G  E  + +  +M     K ++ T + ++ A   L+D  
Sbjct: 199 LEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTA 258

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           FG+QIH F +K+ F  NVFVG + +  Y    C  E   +F  +   D    N +I  Y 
Sbjct: 259 FGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             G+ + +  +F  L  + F+  ++ F  ++S+   +L ++ G+QLH   V      +  
Sbjct: 319 WVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFR 378

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V N++V MY K G  EEA+R+F  +S R+ + WTA+IS  V+ G     +  F E     
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRAN 438

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D +  A V+   +  +++ LG QLH   I+ G++ +V  G AL+D+YA    +K A 
Sbjct: 439 VSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVYSGCALLDMYANCASIKDAI 497

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
              +  S +    +NA+LS + +    D +  +  F +  ++G +PD V+F  L  L+A 
Sbjct: 498 KTFEEMSERNVVTWNALLSAYAQN--GDGKGTLKSFEEMIMSGYQPDSVSF--LCILTAC 553

Query: 477 QACLVRGRSLHAYSIKTGY---AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVS 532
             C +    L  ++  +G    A       A++    + G  D A ++   +  + D + 
Sbjct: 554 SHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIV 613

Query: 533 WNAMLSAYALH 543
           W ++L++  +H
Sbjct: 614 WTSVLNSCRIH 624



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 150/371 (40%), Gaps = 80/371 (21%)

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFME--------KIADDEE--------------- 446
           G L  AR LLD    + +   + I+SG+++        +I DD +               
Sbjct: 57  GQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYS 116

Query: 447 ------DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                 D   LF++   +G +PD VT+  LL+              HA  +K G+  +  
Sbjct: 117 KSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHR 176

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           V N L+  Y K G +D A ++F  +   D VS+N M++ YA +GL + A+ LF EM+  G
Sbjct: 177 VCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLG 236

Query: 561 FAPDDISILGVLQACIYSGLSEGGI-------------------------------CLFN 589
           F P D +   V+ A +  GL +                                  C+ N
Sbjct: 237 FKPSDFTFAAVISASV--GLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCV-N 293

Query: 590 EIEQIYGLRPILE--HFACMVDLLGRAGRLSEAMNLINS---SPFSESPLLWRTLVSVS- 643
           E+ +++   P L+   +  ++      G++ E+++L      + F      + T++S++ 
Sbjct: 294 EVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAA 353

Query: 644 ---KLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
               L    +        + D + + + S +   +MYA  G  +EA ++      LRLS 
Sbjct: 354 SSLDLQMGRQLHAQVVVSMADPDFRVSNSLV---DMYAKCGKFEEADRIF-----LRLSS 405

Query: 701 EAGCSWIEIDS 711
            +   W  + S
Sbjct: 406 RSTVPWTAMIS 416


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 213/662 (32%), Positives = 344/662 (51%), Gaps = 44/662 (6%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           L +     +T   N +I+ Y K   L  A+KLFDGM+ R+A+TWT LI GY     ++  
Sbjct: 69  LFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEA 128

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
             +   M R   + +  T   +L  C+  E      Q+    IK G+++ + VG +L+  
Sbjct: 129 FELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDS 188

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y  S     A  +F+ +                                    E + +TF
Sbjct: 189 YCKSNRLDLACQLFKEMP-----------------------------------EIDSFTF 213

Query: 264 TNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
             V+     N+G+++   G+Q+H   +K   V  + V NA++  Y KH    +A ++FD 
Sbjct: 214 AAVLCA---NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDE 270

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + E++ +S+  +ISGY   G    A + F E             AT++   S   + E+G
Sbjct: 271 MPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMG 330

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q+H   I     S++ +G +LVD+YAK G  + A M+    + +    + A++S +++K
Sbjct: 331 RQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQK 390

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                E+ + LF++ R A +  D  TF+ LL  SAS A L  G+ LH++ IK+G+ ++V 
Sbjct: 391 --GFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVF 448

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
            G+AL+ +YAKCGSI  A Q F+ + DR+IVSWNAM+SAYA +G  +  L  F+EM   G
Sbjct: 449 SGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSG 508

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             PD +S LGVL AC +SGL E G+  FN + QIY L P  EH+A +VD+L R+GR +EA
Sbjct: 509 LQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEA 568

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGSFILVSNMYAG 679
             L+   P     ++W ++++  ++  N + +  A+ +L ++E  +DA  ++ +SN+YA 
Sbjct: 569 EKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAA 628

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE 739
            G  +  +KV   M D  + K    SW+EI  + H F A+ + HP+ EEI  K+D+L   
Sbjct: 629 AGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKT 688

Query: 740 MK 741
           M+
Sbjct: 689 ME 690



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 173/354 (48%), Gaps = 3/354 (0%)

Query: 68  SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
           +IG  D+ LGQ +H+F++K+    + F +N L++ Y+K + +  A+KLFD M  +  +++
Sbjct: 220 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY 279

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
             +I GY  DG ++    +  ++  +     +   + +L   S   D   G QIHA  I 
Sbjct: 280 NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIV 339

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
           +  ++ + VG SL+ MY   G F EAE +F  L ++       MI  Y + G  E    +
Sbjct: 340 TTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQL 399

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +  +    +  TF +++        +  GKQLH   +K G +  +  G+A++ +Y K
Sbjct: 400 FNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAK 459

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G  ++A + F  + +RN++SW A+IS Y ++G     +  F E +  G+  DS     V
Sbjct: 460 CGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGV 519

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLL 419
           +  CS    +E GL  H  ++   Y  D R     ++VD+  + G    A  L+
Sbjct: 520 LSACSHSGLVEEGL-WHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLM 572



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 148/279 (53%), Gaps = 4/279 (1%)

Query: 61  WPQLVKISIGSG--DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           +P    +SI S   D ++G+ +HA  + + + ++    N+L+++YAK  + + A+ +F  
Sbjct: 312 FPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTN 371

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           +  RSA+ WT++I  Y+  G YE  L +   M ++    ++ T + +L A + +     G
Sbjct: 372 LTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLG 431

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q+H+F IKSGF +NVF G++L+ +Y   G  ++A   F+ +  +++   N MI  Y + 
Sbjct: 432 KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQN 491

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISV 297
           GE+E     F  ++ S  +P+  +F  V+S C  +  VEEG    + +   + +      
Sbjct: 492 GEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREH 551

Query: 298 GNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
             ++V M  + G   EAE++   +  + + I W+++++ 
Sbjct: 552 YASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 590



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 170/421 (40%), Gaps = 74/421 (17%)

Query: 256 FEPNDY----TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           F PN      + T++ S+    L +     +    VK G   + S  N  V  + K+G  
Sbjct: 4   FRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGEL 63

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKA------------------------IN 347
            +A ++F+ +  +N +S   +ISGYV+SG+ G+A                        +N
Sbjct: 64  SQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLN 123

Query: 348 GFLE----FLDLGICCDSSCLATVIDGCSVCSNLELG---LQLHGFAIKHGYLSDVRLGT 400
            F E    F+ +  C       T +   S C+  E+G    Q+    IK GY S + +G 
Sbjct: 124 QFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGN 183

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
            LVD Y K   L          +C+   E   I                           
Sbjct: 184 TLVDSYCKSNRLD--------LACQLFKEMPEI--------------------------- 208

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
             D  TF+ +L  +     +V G+ +H++ IKT +  +V V NAL+  Y+K  S+  A +
Sbjct: 209 --DSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARK 266

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F  + ++D VS+N ++S YA  G  K A  LF E++   F         +L     +  
Sbjct: 267 LFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLD 326

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            E G  +  +         IL   + +VD+  + G+  EA  +I ++    S + W  ++
Sbjct: 327 WEMGRQIHAQTIVTTADSEILVGNS-LVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMI 384

Query: 641 S 641
           S
Sbjct: 385 S 385


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 221/695 (31%), Positives = 362/695 (52%), Gaps = 19/695 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G GDL +G  VH  ++K G ++D     +L+ +Y + + LD A K FD M 
Sbjct: 103 FPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMP 162

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           +R  + W+S++  ++ +G     L +   M     + +  T   + EACS L     G  
Sbjct: 163 IRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRS 222

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H + ++   E+N  +  SLI MY   G    AE +F  +  +       MI  YN++G 
Sbjct: 223 VHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGC 282

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGN 299
            + A +VF  +     EPN  T   V+  C     V+EG+ +HG  ++  +  E+  +G 
Sbjct: 283 FQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGP 342

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ +Y   G   +  ++F+ I E+ ++SW  LIS + R+G   +A+  F++    G+  
Sbjct: 343 ALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMP 402

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           DS  LA+ +  C   S  +LG Q+HG+ IK G  +D  +  AL+D+YAK G + SA  + 
Sbjct: 403 DSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMF 461

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    K    +N+++ GF +     E   + LF Q  +  ++ D +TF     LS  QAC
Sbjct: 462 EKIKEKSLVTWNSMICGFSQNGYSVE--AITLFDQMYMNCVKMDKLTF-----LSVIQAC 514

Query: 480 -----LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
                L +G+ +H   I  G   D  +  AL  MY+KCG +  A  +F  +S+R IVSW+
Sbjct: 515 SHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWS 574

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
            M++ Y +HG     + LF +M   G  P+DI+ + +L AC ++G  E G   FN + + 
Sbjct: 575 VMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE- 633

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           +G+ P  +HFACMVDLL RAG L+ A  +I S PF  +  +W  L++  ++  + +  I+
Sbjct: 634 FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRI--HKRIDII 691

Query: 655 AS--KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
            S  K LLD++  D G + L+SN+YA +G  D+  KVR+ M    L K  G S IEID K
Sbjct: 692 KSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKK 751

Query: 713 LHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDS 747
           ++ F      H ++++IY  L+     +  +V DS
Sbjct: 752 IYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDS 786



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 161/570 (28%), Positives = 285/570 (50%), Gaps = 13/570 (2%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA L  +G       +  LI  YA+    + ++++FD      +  W  LIK Y+  G 
Sbjct: 20  LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 79

Query: 140 YESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
           +E  + +  +M Y+ + + +      +L+ACS   D   G ++H   IK GFE++  V T
Sbjct: 80  FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVET 139

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           SL+ MY    C  +A   F  +  +DV   + ++L + + G++     +F  ++S   EP
Sbjct: 140 SLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEP 199

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +  T  +V   C E   +  G+ +HG  V+  +    S+ N+++ MYGK G    AER+F
Sbjct: 200 DSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF 259

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           + +  R    WT +IS Y +SG   +A+N F +  +  +  +   +  V+  C+    ++
Sbjct: 260 ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVK 319

Query: 379 LGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
            G  +HGF I+     ++  LG AL+++YA  G+L+    + +    K    +N ++S F
Sbjct: 320 EGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF 379

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
                   E+ ++LF Q +  G+ PD  + +  LS   + +    G  +H Y IKTG   
Sbjct: 380 TRN--GQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFN 437

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D  V NALI MYAKCG +  A ++F+ I ++ +V+WN+M+  ++ +G    A+ LF++M 
Sbjct: 438 D-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMY 496

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
                 D ++ L V+QAC + G  E G  + +++  +YGLR        + D+  + G L
Sbjct: 497 MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKL-IMYGLRKDSYLDTALTDMYSKCGEL 555

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
             A  + +    SE     R++VS S ++A
Sbjct: 556 QMAHGVFDR--MSE-----RSIVSWSVMIA 578



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 228/463 (49%), Gaps = 7/463 (1%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           Q+HA    +G   +    T LI  Y   G F  ++ VF      D      +I  Y   G
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78

Query: 240 ESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
             E A  ++  ++  D  + +++ F +V+  C     +  G ++HG  +K G   +  V 
Sbjct: 79  FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            +++ MYG+    ++A + FD +  R++++W++++  +V++G   + ++ F + +   + 
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVE 198

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            DS  + +V + CS   +L LG  +HG+ ++    S+  L  +L+ +Y K GDL SA  L
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +   C+ TA +  ++S + +     E   + +F++ +   MEP+ VT   +L   A   
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQE--ALNVFAKMQEFKMEPNQVTMVGVLCACARLG 316

Query: 479 CLVRGRSLHAYSIKTGYAADV-IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
            +  GRS+H + I+     ++  +G AL+ +YA  G++    ++F+ I ++ I+SWN ++
Sbjct: 317 RVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLI 376

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           S +  +G  + ALLLF +M+ +G  PD  S+   L AC     S+ G  +   I +    
Sbjct: 377 SIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNF 436

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
              +++   ++D+  + G +  A  +       +S + W +++
Sbjct: 437 NDFVQN--ALIDMYAKCGFVHSANKMFEKIK-EKSLVTWNSMI 476



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 174/369 (47%), Gaps = 16/369 (4%)

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           QLH      G+ R       ++  Y + G+ E ++R+FD   + +   W  LI  YV  G
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78

Query: 341 HGGKAINGFLEFLDLGICCDSS-CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
              +A++ + E +       S+    +V+  CS   +L +G ++HG  IK G+ SD  + 
Sbjct: 79  FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           T+L+ +Y +   L  A    D    +    +++I+  F++     E   + +FSQ     
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEG--LDMFSQMISEA 196

Query: 460 MEPDPVTFSRLLSLSASQAC-----LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
           +EPD VT      LS ++AC     L  GRS+H Y ++    ++  + N+LI MY K G 
Sbjct: 197 VEPDSVTM-----LSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGD 251

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +  A ++F+ +  R    W  M+S Y   G  + AL +F +M+     P+ ++++GVL A
Sbjct: 252 LYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCA 311

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFA-CMVDLLGRAGRLSEAMNLINSSPFSESP 633
           C   G  + G  +   + +   + P L+     +++L    G L +   +  +    ++ 
Sbjct: 312 CARLGRVKEGRSVHGFVIR-RAMDPELDFLGPALMELYADTGNLRDCHKVFETIK-EKTI 369

Query: 634 LLWRTLVSV 642
           L W TL+S+
Sbjct: 370 LSWNTLISI 378



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 22/265 (8%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           C+      QLH      G        T L++ YA+ G  +S++ + D F    +  +  +
Sbjct: 11  CATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVL 70

Query: 434 LS-----GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           +      GF E+      + MV   Q +++        F  +L   +    L  G  +H 
Sbjct: 71  IKCYVWGGFFEEAVSLYHE-MVYQDQTQISNF-----VFPSVLKACSGFGDLSVGGKVHG 124

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             IK G+ +D +V  +L+ MY +   +D A + F  +  RD+V+W++++  +  +G    
Sbjct: 125 RVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASE 184

Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIEQIYGLRPILEH 603
            L +F +M  E   PD +++L V +AC     +  G S  G  +  EIE    L   L  
Sbjct: 185 GLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSL-- 242

Query: 604 FACMVDLLGRAGRLSEAMNLINSSP 628
               + + G+ G L  A  L  + P
Sbjct: 243 ----IVMYGKLGDLYSAERLFENVP 263


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 220/666 (33%), Positives = 359/666 (53%), Gaps = 13/666 (1%)

Query: 86   KSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLG 145
            KSG   D +  + L++ +A+F   D A+ +F+ M VR+ ++   L+ G +     E+   
Sbjct: 783  KSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 842

Query: 146  IACDMYRSEEKFNEHTCSVILEACS----LLEDRIFGEQIHAFAIKSGF-ENNVFVGTSL 200
            +  +M +     N  +  V+L A S    L E R  G ++HA  I++G  +N V +G  L
Sbjct: 843  VFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGL 901

Query: 201  ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
            ++MY  SG   +A +VF  +  KD    N +I   ++   SE A   F+ +  +   P++
Sbjct: 902  VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSN 961

Query: 261  YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
            +T  + +S C     +  G+Q+H   +K G+  ++SV NA++ +Y + G   E  ++F  
Sbjct: 962  FTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL 1021

Query: 321  ISERNLISWTALISGYVRS-GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            + E + +SW ++I     S     +A+  FLE +  G          ++   S  S  E+
Sbjct: 1022 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEV 1081

Query: 380  GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAILSGFM 438
              Q+H   +K+    D  +G AL+  Y K G++     +    S  +    +N+++SG++
Sbjct: 1082 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 1141

Query: 439  EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
                  +   +V F  Q+  G   D  TF+ +LS  AS A L RG  +HA  I+    +D
Sbjct: 1142 HNELLHKAMDLVWFMMQK--GQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESD 1199

Query: 499  VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
            V+VG+AL+ MY+KCG ID A + F+ +  R++ SWN+M+S YA HG G+ AL LF  M  
Sbjct: 1200 VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMML 1259

Query: 559  EGFAPDDIS-ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
            +G  PD ++ +LGVL AC + G  E G   F  + ++Y L P +EHF+CMVDLLGRAG+L
Sbjct: 1260 DGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKL 1319

Query: 618  SEAMNLINSSPFSESPLLWRTLVSVSKLM--ANSKFSILASKRLLDLEPKDAGSFILVSN 675
             E  + INS P   + L+WRT++         N++    A++ LL+LEP++A +++L++N
Sbjct: 1320 DEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLAN 1379

Query: 676  MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
            MYA     ++ AK R  M +  + KEAGCSW+ +   +H FVA  K HPE + IY KL  
Sbjct: 1380 MYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRE 1439

Query: 736  LNDEMK 741
            LN +M+
Sbjct: 1440 LNRKMR 1445



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 181/661 (27%), Positives = 307/661 (46%), Gaps = 56/661 (8%)

Query: 12   PPFKSQ--QSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISI 69
            PP KS   + L P +    +     + K+  ++ C+ +  S SE       +  L+    
Sbjct: 503  PPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSH-CNTTLFSSSE------TFESLINRYQ 555

Query: 70   GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
            GS   +  + +H   +K G   + F +N LIN+Y +   L  AQKLFD M  R+ +TW  
Sbjct: 556  GSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWAC 615

Query: 130  LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC--SLLEDRIFGEQIHAFAIK 187
            LI GY  +G  +       DM R+    N +     L AC  S       G QIH    K
Sbjct: 616  LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 675

Query: 188  SGFENNVFVGTSLISMYFHSGCF---REAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            + + ++V V   LISMY    C     +A +VF  +  ++    N +I  Y++ G+   A
Sbjct: 676  TRYGSDVVVCNVLISMY--GSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSA 733

Query: 245  FHVFVHL----LSSDFEPNDYTFTNVISVCYE--NLGVEEGKQLHGLAVKFGVVREISVG 298
            + +F  +    L   F+PN+YTF ++I+      + G+   +Q+     K G ++++ VG
Sbjct: 734  YDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVG 793

Query: 299  NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GI 357
            +A+V+ + + G++++A+ +F+ +  RN++S   L+ G V+   G  A   F E  DL GI
Sbjct: 794  SALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGI 853

Query: 358  CCDSSCLATVIDGCSVCSNLE----LGLQLHGFAIKHGYLSD--VRLGTALVDIYAKGGD 411
              DS     ++   S  S LE     G ++H   I+ G L+D  V +G  LV++YAK G 
Sbjct: 854  NSDS--YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTG-LNDNKVAIGNGLVNMYAKSGA 910

Query: 412  LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
            +  A  + +    K +  +N+++SG  +   +  ED    F + R  G  P   T    L
Sbjct: 911  IADACSVFELMVEKDSVSWNSLISGLDQN--ECSEDAAESFLRMRRTGSMPSNFTLISTL 968

Query: 472  SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
            S  AS   ++ G  +H   +K G   DV V NAL+ +YA+ G      ++F  + + D V
Sbjct: 969  SSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQV 1028

Query: 532  SWNAMLSAYA-LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
            SWN+++ A +        A+  F EM R G+    ++ + +L A   S LS     L   
Sbjct: 1029 SWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAV--SSLS-----LHEV 1081

Query: 591  IEQIYGLRPILEHFACMVD----------LLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
              QI+ L  +L++  C+ D            G+ G ++E   +      +   + W +++
Sbjct: 1082 SHQIHAL--VLKY--CLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 1137

Query: 641  S 641
            S
Sbjct: 1138 S 1138



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 14/121 (11%)

Query: 74   LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            L+ G  VHA  +++  ++D    + L+++Y+K  R+D A + F+ M +R+  +W S+I G
Sbjct: 1181 LERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISG 1240

Query: 134  YLDDGDYESVLGIACDMYRSEEKFNEHTCSV--ILEACSLLEDRIFGEQIHAFAIKSGFE 191
            Y   G  E  L +   M    +   +H   +  +L ACS           H   ++ GFE
Sbjct: 1241 YARHGHGEKALKLFTRMMLDGQP-PDHVAPLLGVLSACS-----------HVGFVEEGFE 1288

Query: 192  N 192
            +
Sbjct: 1289 H 1289


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 205/676 (30%), Positives = 362/676 (53%), Gaps = 3/676 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  D ++G  V+  +L+ G ++D +  N L+++Y++   L  A+++FD M 
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMP 168

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           VR  ++W SLI GY   G YE  L I  ++  S    +  T S +L A + L     G+ 
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQG 228

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H F +KSG  +   V   L++MY       +A  VF  +  +D    N MI  Y K   
Sbjct: 229 LHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEM 288

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E +  +F+  L   F+P+  T T+V+  C     +   K ++   ++ G V E +V N 
Sbjct: 289 VEESVKMFLENLD-QFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNI 347

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G    A  +F+++  ++ +SW ++ISGY++SG   +A+  F   + +    D
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
                 +I   +  ++L+ G  LH   IK G   D+ +  AL+D+YAK G++  +  + +
Sbjct: 408 HITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFN 467

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                 T  +N ++S  + +  D    + V  +Q R   + PD  TF   L + AS A  
Sbjct: 468 SMGTLDTVTWNTVISACV-RFGDFATGLQVT-TQMRKNKVVPDMATFLVTLPMCASLAAK 525

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H   ++ GY +++ +GNALI MY+KCG ++ +F++F+ +S RD+V+W  M+ AY
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAY 585

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
            ++G G+ AL  F +M++ G  PD +  + ++ AC +SGL E G+  F +++  Y + P+
Sbjct: 586 GMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPM 645

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+AC+VDLL R+ ++S+A   I + P      +W +++   +   + + +   S+R++
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRII 705

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L P D G  IL SN YA     D+ + +R ++ D  + K  G SWIEI  K+H F +  
Sbjct: 706 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGD 765

Query: 721 KDHPESEEIYSKLDLL 736
              P+SE I+  L++L
Sbjct: 766 DSAPQSEAIHKSLEIL 781



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 260/506 (51%), Gaps = 4/506 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-LVRSAITWTS 129
           S +L   + +HA ++  G     F +  LI+ Y+ F     +  +F  +   ++   W S
Sbjct: 17  SSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNS 76

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I+ +  +G +   L     +  S+   +++T   +++AC+ L D   G+ ++   ++ G
Sbjct: 77  IIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMG 136

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           FE++++VG +L+ MY   G    A  VF  +  +D+   N +I  Y+  G  E A  ++ 
Sbjct: 137 FESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            L +S   P+ +T ++V+      L V++G+ LHG  +K GV     V N ++ MY K  
Sbjct: 197 ELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFS 256

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              +A R+FD +  R+ +++  +I GY++     +++  FLE LD     D   + +V+ 
Sbjct: 257 RPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QFKPDILTVTSVLC 315

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C    +L L   ++ + ++ G++ +  +   L+D+YAK GD+ +AR + +   CK T  
Sbjct: 316 ACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVS 375

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N+I+SG+++  + D  + M LF    +   + D +T+  L+SLS   A L  G+ LH+ 
Sbjct: 376 WNSIISGYIQ--SGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSN 433

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            IK+G   D+ V NALI MYAKCG +  + +IF  +   D V+WN ++SA    G     
Sbjct: 434 GIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATG 493

Query: 550 LLLFEEMKREGFAPDDISILGVLQAC 575
           L +  +M++    PD  + L  L  C
Sbjct: 494 LQVTTQMRKNKVVPDMATFLVTLPMC 519



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 10/177 (5%)

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           SR LS S++   L   R +HA  I  G          LI  Y+   +   +  +F+ +S 
Sbjct: 11  SRALSSSSN---LNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSP 67

Query: 528 -RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL--SEGG 584
            +++  WN+++ A++ +G    AL  + +++    +PD  +   V++AC  +GL  +E G
Sbjct: 68  AKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMG 125

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             ++ +I ++ G    L     +VD+  R G LS A  + +  P  +  + W +L+S
Sbjct: 126 DLVYKQILEM-GFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRD-LVSWNSLIS 180


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 221/670 (32%), Positives = 362/670 (54%), Gaps = 2/670 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  ++ L   VH      G   D F  + LI LYA    +  A+++FD + 
Sbjct: 148 FPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP 207

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  I W  ++ GY+  GD+ + +G  C M  S    N  T + IL  C+       G Q
Sbjct: 208 QRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQ 267

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H   I SGFE +  V  +L++MY   G   +A  +F  +   D    N +I  Y + G 
Sbjct: 268 VHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGF 327

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           ++ A  +F  ++S+  +P+  TF + +    E+  +   K++H   V+  V  ++ + +A
Sbjct: 328 TDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSA 387

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G  E A ++F   +  ++   TA+ISGYV  G    AIN F   +  G+  +
Sbjct: 388 LIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPN 447

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  +A+V+  C+  + L+LG +LH   +K    + V +G+A+ D+YAK G L  A     
Sbjct: 448 SLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFR 507

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             S   +  +N+++S F +      E  + LF Q  ++G + D V+ S  LS +A+   L
Sbjct: 508 RMSETDSICWNSMISSFSQN--GKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPAL 565

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H Y I+  +++D  V +ALI MY+KCG +  A  +F  ++ ++ VSWN++++AY
Sbjct: 566 YYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAY 625

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG  +  L LF EM R G  PD ++ L ++ AC ++GL   GI  F+ + + YG+   
Sbjct: 626 GNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGAR 685

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+ACMVDL GRAGRL EA + I S PF+    +W TL+   +L  N + + LAS+ LL
Sbjct: 686 MEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLL 745

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L+PK++G ++L+SN++A  G      KVR  M +  + K  G SWI+++   H F A+ 
Sbjct: 746 ELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAE 805

Query: 721 KDHPESEEIY 730
            +HPES EIY
Sbjct: 806 GNHPESVEIY 815



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 246/487 (50%), Gaps = 2/487 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++  + VH  ++  G  +    ++ ++ LY    R+     LF G+ + +A+ W  +I+G
Sbjct: 60  VQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRG 119

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
               G ++  L     M  S    +++T   +++AC  L +      +H  A   GF  +
Sbjct: 120 LYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVD 179

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FVG++LI +Y  +G   +A  VF  L  +D    N M+  Y K+G+   A   F  + +
Sbjct: 180 LFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRT 239

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           S    N  T+T ++S+C        G Q+HGL +  G   +  V N +V MY K G   +
Sbjct: 240 SYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFD 299

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++F+ + + + ++W  LI+GYV++G   +A   F   +  G+  DS   A+ +     
Sbjct: 300 ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILE 359

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +L    ++H + ++H    DV L +AL+DIY KGGD++ AR +    +    A   A+
Sbjct: 360 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAM 419

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SG++  +     D +  F      GM P+ +T + +L   A+ A L  G+ LH   +K 
Sbjct: 420 ISGYV--LHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKK 477

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
                V VG+A+  MYAKCG +D A++ F+ +S+ D + WN+M+S+++ +G  + A+ LF
Sbjct: 478 QLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLF 537

Query: 554 EEMKREG 560
            +M   G
Sbjct: 538 RQMGMSG 544



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 222/477 (46%), Gaps = 4/477 (0%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +  ACS         Q+H   I  G  +   + + ++ +Y   G   +  N+F GL   +
Sbjct: 50  LFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCN 109

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
               N+MI      G  + A   +  +L S+  P+ YTF  VI  C     V     +H 
Sbjct: 110 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHN 169

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            A   G   ++ VG+A++ +Y  +G   +A R+FD + +R+ I W  ++ GYV+SG    
Sbjct: 170 TARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNN 229

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+  F          +S     ++  C+      LG Q+HG  I  G+  D ++   LV 
Sbjct: 230 AMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVA 289

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y+K G+L  AR L +      T  +N +++G+++    DE     LF+    AG++PD 
Sbjct: 290 MYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDE--AAPLFNAMISAGVKPDS 347

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           VTF+  L        L   + +H+Y ++     DV + +ALI +Y K G ++ A +IF+ 
Sbjct: 348 VTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQ 407

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
            +  D+    AM+S Y LHGL   A+  F  + +EG  P+ +++  VL AC      + G
Sbjct: 408 NTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLG 467

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             L  +I +   L  I+   + + D+  + GRL  A         ++S + W +++S
Sbjct: 468 KELHCDILK-KQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDS-ICWNSMIS 522



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 154/326 (47%), Gaps = 5/326 (1%)

Query: 257 EPNDYTFTNVISV---CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           E  DY  T + S+   C +   V++ +Q+H   +  G+    ++ + ++ +Y   G   +
Sbjct: 38  ETQDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISD 97

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
              +F  +   N + W  +I G    G    A+  + + L   +  D      VI  C  
Sbjct: 98  GGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGG 157

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            +N+ L + +H  A   G+  D+ +G+AL+ +YA  G +  AR + D    + T  +N +
Sbjct: 158 LNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVM 217

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           L G+++  + D  + M  F   R +    + VT++ +LS+ A++     G  +H   I +
Sbjct: 218 LHGYVK--SGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGS 275

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+  D  V N L+ MY+KCG++  A ++F  +   D V+WN +++ Y  +G    A  LF
Sbjct: 276 GFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLF 335

Query: 554 EEMKREGFAPDDISILGVLQACIYSG 579
             M   G  PD ++    L + + SG
Sbjct: 336 NAMISAGVKPDSVTFASFLPSILESG 361


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 210/709 (29%), Positives = 380/709 (53%), Gaps = 25/709 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYAKFNRLDVAQKLFDGM 119
           +P L+K      D++LG+ +HA + K G   D+   AN L+NLY K        K+FD +
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL---EDRI 176
             R+ ++W SLI        +E  L     M     + +  T   ++ ACS L   E  +
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM 219

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+Q+HA+ ++ G E N F+  +L++MY   G    ++ +      +D+   N ++    
Sbjct: 220 MGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           +  +   A      ++    EP+++T ++V+  C     +  GK+LH  A+K G + E S
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338

Query: 297 -VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD- 354
            VG+A+V MY          R+FD + +R +  W A+I+GY ++ H  +A+  F+   + 
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G+  +S+ +A V+  C           +HGF +K G   D  +   L+D+Y++ G +  
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR-----------LAGMEPD 463
           A  +      +    +N +++G++   ++  ED ++L  + +              ++P+
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYV--FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
            +T   +L   A+ + L +G+ +HAY+IK   A DV VG+AL+ MYAKCG +  + ++F 
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            I  +++++WN ++ AY +HG G+ A+ L   M  +G  P++++ + V  AC +SG+ + 
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP--FSESPLLWRTLVS 641
           G+ +F  ++  YG+ P  +H+AC+VDLLGRAGR+ EA  L+N  P  F+++   W +L+ 
Sbjct: 637 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG-AWSSLLG 695

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
            S++  N +   +A++ L+ LEP  A  ++L++N+Y+  G+ D+A +VR  M +  + KE
Sbjct: 696 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755

Query: 702 AGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSS 748
            GCSWIE   ++H FVA    HP+SE++   L+ L + M+ +  V D+S
Sbjct: 756 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTS 804



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 149/596 (25%), Positives = 283/596 (47%), Gaps = 35/596 (5%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           RS   W  L++  +        +    DM     K + +    +L+A + L+D   G+QI
Sbjct: 60  RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119

Query: 182 HAFAIKSGFE-NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           HA   K G+  ++V V  +L+++Y   G F     VF  ++ ++    N +I       +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE----GKQLHGLAVKFGVVREIS 296
            EMA   F  +L  + EP+ +T  +V++ C  NL + E    GKQ+H   ++ G +    
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTAC-SNLPMPEGLMMGKQVHAYGLRKGELNSFI 238

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           + N +V MYGK G    ++ +  +   R+L++W  ++S   ++    +A+    E +  G
Sbjct: 239 I-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSA 415
           +  D   +++V+  CS    L  G +LH +A+K+G L +   +G+ALVD+Y     + S 
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R + DG   +    +NA+++G+ +    D+E +++    +  AG+  +  T + ++    
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQN-EHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
                 R  ++H + +K G   D  V N L+ MY++ G ID A +IF  + DRD+V+WN 
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476

Query: 536 MLSAYALHGLGKGALLLFEEMK-----------REGFAPDDISILGVLQAC-IYSGLSEG 583
           M++ Y      + ALLL  +M+           R    P+ I+++ +L +C   S L++G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536

Query: 584 GICLFNEIEQIYGLRPILEH----FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
                 EI   Y ++  L       + +VD+  + G L  +  + +  P  ++ + W  +
Sbjct: 537 -----KEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 589

Query: 640 VSVSKLMANSKFSI--LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           +    +  N + +I  L    +  ++P +  +FI V    +  GM+DE  ++   M
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEV-TFISVFAACSHSGMVDEGLRIFYVM 644


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 214/673 (31%), Positives = 364/673 (54%), Gaps = 7/673 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P LVK  +   + K  + +   +   G   + F A++LI  Y ++ ++DVA KLFD +L
Sbjct: 137 FPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVL 196

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS--LLEDRIFG 178
            +  + W  ++ GY   G  +SV+     M   +   N  T   +L  C+  LL D   G
Sbjct: 197 QKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLID--LG 254

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+H   + SG +    +  SL+SMY   G F +A  +FR ++  D    N MI  Y ++
Sbjct: 255 VQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQS 314

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G  E +   F  ++SS   P+  TF++++    +   +E  +Q+H   ++  +  +I + 
Sbjct: 315 GLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLT 374

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           +A++  Y K      A+++F   +  +++ +TA+ISGY+ +G    A+  F   + + I 
Sbjct: 375 SALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKIS 434

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +   L +++        L+LG +LHGF IK G+ +   +G A++D+YAK G +  A  +
Sbjct: 435 PNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 494

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               S +    +N++++   +  +D+    + +F Q  ++G+  D V+ S  LS  A+  
Sbjct: 495 FGRLSKRDIVSWNSMITRCAQ--SDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLP 552

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
               G+++H + IK   A DV   + LI MYAKCG++  A  +F  + +++IVSWN++++
Sbjct: 553 SESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIA 612

Query: 539 AYALHGLGKGALLLFEEM-KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           AY  HG  K +L LF EM ++ G  PD I+ L ++  C + G  + G+  F  + Q YG+
Sbjct: 613 AYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGI 672

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
           +P  EH+AC+VDL GRAGRLSEA   + S PF     +W TL+  S+L  N + + +AS 
Sbjct: 673 QPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASS 732

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           RL+DL+P ++G ++L+SN +A  G  +   KVR+ M +  + K  G SWIEI+   H FV
Sbjct: 733 RLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFV 792

Query: 718 ASGKDHPESEEIY 730
           +   +HPES  IY
Sbjct: 793 SGDVNHPESSHIY 805



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 264/556 (47%), Gaps = 7/556 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR--SAITWTSLI 131
           L+ G+ VHAF++ +    D++    ++ +YA         K+F  +  R  S   W S+I
Sbjct: 47  LRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSII 106

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             ++  G     L     M       +  T   +++AC  L++    E +       G +
Sbjct: 107 SSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMD 166

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            N FV +SLI  Y   G    A  +F  +  KD    N M+  Y K G S+     F  +
Sbjct: 167 CNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLM 226

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 PN  TF  V+SVC   L ++ G QLHGL V  G+  E S+ N++++MY K G  
Sbjct: 227 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRF 286

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A ++F  +S  + ++W  +ISGYV+SG   +++  F E +  G+  D+   ++++   
Sbjct: 287 DDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSV 346

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S   NLE   Q+H + ++H    D+ L +AL+D Y K   +  A+ +    +      F 
Sbjct: 347 SKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFT 406

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A++SG++    +   D + +F       + P+ +T   +L +      L  GR LH + I
Sbjct: 407 AMISGYLHNGLN--IDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFII 464

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+     +G A+I MYAKCG ++ A++IF  +S RDIVSWN+M++  A       A+ 
Sbjct: 465 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAID 524

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN-EIEQIYGLRPILEHFACMVDL 610
           +F +M   G   D +SI   L AC        G  +    I+    L    E  + ++D+
Sbjct: 525 IFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSE--STLIDM 582

Query: 611 LGRAGRLSEAMNLINS 626
             + G L  AMN+ ++
Sbjct: 583 YAKCGNLKAAMNVFDT 598



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 200/424 (47%), Gaps = 4/424 (0%)

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
           YR  E+      S++L+ CS L     G+Q+HAF I +    + +    ++ MY   G F
Sbjct: 23  YRFLEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSF 82

Query: 211 REAENVFRGLAYK--DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
                +F  L  +   +R  N +I  + + G    A   +  +L     P+  TF  ++ 
Sbjct: 83  SNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVK 142

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
            C      +  + L       G+     V ++++  Y ++G  + A ++FD + +++ + 
Sbjct: 143 ACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVI 202

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           W  +++GY + G     I GF       I  ++     V+  C+    ++LG+QLHG  +
Sbjct: 203 WNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 262

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
             G   +  +  +L+ +Y+K G    A  L    S   T  +N ++SG+++  +   E+ 
Sbjct: 263 VSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQ--SGLMEES 320

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
           ++ F +   +G+ PD +TFS LL   +    L   R +H Y ++   + D+ + +ALI  
Sbjct: 321 LIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDA 380

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           Y KC  +  A +IF   +  D+V + AM+S Y  +GL   AL +F  + +   +P++I++
Sbjct: 381 YFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITL 440

Query: 569 LGVL 572
           + +L
Sbjct: 441 VSIL 444



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           E  P   S LL   ++   L +G+ +HA+ I    + D      ++ MYA CGS     +
Sbjct: 28  ETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGK 87

Query: 521 IFKGISDR--DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
           +F  +  R   I  WN+++S++   GL   AL  + +M   G +PD  +   +++AC+
Sbjct: 88  MFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV 145


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 212/687 (30%), Positives = 358/687 (52%), Gaps = 10/687 (1%)

Query: 72   GDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
            GD  +G  +   ++KSG    +   AN+LI+++  ++ ++ A ++F+ M  R  I+W S+
Sbjct: 364  GDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSI 423

Query: 131  IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            I     +G +E  LG    M R+  K +  T S +L AC   +   +G  +H    KSG 
Sbjct: 424  ITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGL 483

Query: 191  ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            E+NV V  SL+SMY  +G   +AE VF  +  +D+   N M+  + + G+   A  + V 
Sbjct: 484  ESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVE 543

Query: 251  LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
            +L +    N  TFT  +S CY    +E+ K +H   + F V   + +GN +VTMYGK G+
Sbjct: 544  MLKTRKAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGL 600

Query: 311  SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             +EA+++   + ER++++W ALI G+         I  F      G+  +   +  ++  
Sbjct: 601  MDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGT 660

Query: 371  C-SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C S    L+ G+ +H   +  G+  D  + ++L+ +YA+ GDL ++  + D  + K ++ 
Sbjct: 661  CMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSST 720

Query: 430  FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
            +NAI S          E+ +   ++ R  G++ D  +FS  L+   +   L  G+ LH++
Sbjct: 721  WNAIFSA--NAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSW 778

Query: 490  SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
             IK G+  D  V NA + MY KCG ID  F+I      R   SWN ++SA A HG  + A
Sbjct: 779  IIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQA 838

Query: 550  LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
               F EM   G  PD ++ + +L AC + GL + G+  F+ +   +G+   +EH  C++D
Sbjct: 839  TEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIID 898

Query: 610  LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
            LLGR+GRL+EA   I+  P   +  +WR+L++  K+  N +    A+ RL +L   D  +
Sbjct: 899  LLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSA 958

Query: 670  FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
            ++L SN+ A      +   VR  M    L K+  CSWI++ +K+  F    + HP+S +I
Sbjct: 959  YVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQI 1018

Query: 730  YSKLDLLNDEMKLK--VKDSSAFELQD 754
            Y+KL+ L    + +  + D+S + LQD
Sbjct: 1019 YAKLEELRKMTREEGHMPDTS-YALQD 1044



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 254/507 (50%), Gaps = 13/507 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
            +G+A+HA  +K   Q +TF  N L+N+Y+KF  +  AQ +FD M  R+  +W ++I G+
Sbjct: 164 NVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGF 223

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG-EQIHAFAIKSGFENN 193
           +  G Y   +   C M+ +    + +  + ++ AC        G  QIH + +K G  +N
Sbjct: 224 VRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSN 283

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VFVGTSL+  Y   G   EA  +F  +   ++     +++ Y   G ++   +++ HL  
Sbjct: 284 VFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRH 343

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHGMSE 312
           +       T   VI  C        G Q+ G  +K G+    +SV N++++M+G +   E
Sbjct: 344 NGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVE 403

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA R+F+ + ER+ ISW ++I+    +G   +++  F          D   ++ ++  C 
Sbjct: 404 EASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACG 463

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +L+ G  LHG   K G  S+V +  +L+ +YA+ G  + A ++      +    +N+
Sbjct: 464 SAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNS 523

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEP-DPVTFSRLLSLSASQAC--LVRGRSLHAY 489
           +++  +E   D +    +L   + L   +  + VTF+  LS     AC  L + + +HA+
Sbjct: 524 MMASHVE---DGKYSHAILLLVEMLKTRKAMNYVTFTTALS-----ACYNLEKLKIVHAF 575

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            I      ++I+GN L+TMY K G +D A ++ K + +RD+V+WNA++  +A        
Sbjct: 576 VIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNAT 635

Query: 550 LLLFEEMKREGFAPDDISILGVLQACI 576
           +  F  M+REG   + I+I+ +L  C+
Sbjct: 636 IQAFNLMRREGLLSNYITIVNLLGTCM 662



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 228/474 (48%), Gaps = 27/474 (5%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+ +HA  +K   + N F   +L++MY   G  + A++VF  +  ++    N MI  + +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREIS 296
            G    A   F H+  +   P+ Y   ++++ C  +  + EG +Q+HG  VK G++  + 
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           VG +++  YG HG   EA ++F+ I E N++SWT+L+  Y  +GH  + +N +      G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSA 415
           + C  + +ATVI  C +  +  +G Q+ G  IK G   S V +  +L+ ++     ++ A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             + +    + T  +N+I++          E+ +  F   R    + D +T S LL    
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHN--GRFEESLGHFFWMRRTHPKTDYITISALLPACG 463

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S   L  GR LH    K+G  ++V V N+L++MYA+ GS + A  +F  +  RD++SWN+
Sbjct: 464 SAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNS 523

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++++   G    A+LL  EM +   A + ++    L AC               +E++ 
Sbjct: 524 MMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACY-------------NLEKLK 570

Query: 596 GLRPILEHFA---------CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            +   + HFA          +V + G+ G + EA  +    P     + W  L+
Sbjct: 571 IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALI 623



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 19/244 (7%)

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           G S  S   +G  LH   +K     +      LV++Y+K G +K A+ + D    +  A 
Sbjct: 156 GFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDAS 215

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHA 488
           +N ++SGF+          M  F      G+ P     + +++      C+  G R +H 
Sbjct: 216 WNNMISGFVR--VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHG 273

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y +K G  ++V VG +L+  Y   GS+  A ++F+ I + +IVSW +++  YA +G  K 
Sbjct: 274 YVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKE 333

Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC----------------IYSGLSEGGICLFNEIE 592
            L ++  ++  G      ++  V++ C                I SGL    + + N + 
Sbjct: 334 VLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLI 393

Query: 593 QIYG 596
            ++G
Sbjct: 394 SMFG 397


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 210/709 (29%), Positives = 380/709 (53%), Gaps = 25/709 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYAKFNRLDVAQKLFDGM 119
           +P L+K      D++LG+ +HA + K G   D+   AN L+NLY K        K+FD +
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL---EDRI 176
             R+ ++W SLI        +E  L     M     + +  T   ++ ACS L   E  +
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM 219

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+Q+HA+ ++ G E N F+  +L++MY   G    ++ +      +D+   N ++    
Sbjct: 220 MGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           +  +   A      ++    EP+++T ++V+  C     +  GK+LH  A+K G + E S
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338

Query: 297 -VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD- 354
            VG+A+V MY          R+FD + +R +  W A+I+GY ++ H  +A+  F+   + 
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G+  +S+ +A V+  C           +HGF +K G   D  +   L+D+Y++ G +  
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR-----------LAGMEPD 463
           A  +      +    +N +++G++   ++  ED ++L  + +              ++P+
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYV--FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
            +T   +L   A+ + L +G+ +HAY+IK   A DV VG+AL+ MYAKCG +  + ++F 
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            I  +++++WN ++ AY +HG G+ A+ L   M  +G  P++++ + V  AC +SG+ + 
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP--FSESPLLWRTLVS 641
           G+ +F  ++  YG+ P  +H+AC+VDLLGRAGR+ EA  L+N  P  F+++   W +L+ 
Sbjct: 637 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG-AWSSLLG 695

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
            S++  N +   +A++ L+ LEP  A  ++L++N+Y+  G+ D+A +VR  M +  + KE
Sbjct: 696 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755

Query: 702 AGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSS 748
            GCSWIE   ++H FVA    HP+SE++   L+ L + M+ +  V D+S
Sbjct: 756 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTS 804



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 149/596 (25%), Positives = 283/596 (47%), Gaps = 35/596 (5%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           RS   W  L++  +        +    DM     K + +    +L+A + L+D   G+QI
Sbjct: 60  RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119

Query: 182 HAFAIKSGFE-NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           HA   K G+  ++V V  +L+++Y   G F     VF  ++ ++    N +I       +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE----GKQLHGLAVKFGVVREIS 296
            EMA   F  +L  + EP+ +T  +V++ C  NL + E    GKQ+H   ++ G +    
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTAC-SNLPMPEGLMMGKQVHAYGLRKGELNSFI 238

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           + N +V MYGK G    ++ +  +   R+L++W  ++S   ++    +A+    E +  G
Sbjct: 239 I-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSA 415
           +  D   +++V+  CS    L  G +LH +A+K+G L +   +G+ALVD+Y     + S 
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R + DG   +    +NA+++G+ +    D+E +++    +  AG+  +  T + ++    
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQN-EHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
                 R  ++H + +K G   D  V N L+ MY++ G ID A +IF  + DRD+V+WN 
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476

Query: 536 MLSAYALHGLGKGALLLFEEMK-----------REGFAPDDISILGVLQAC-IYSGLSEG 583
           M++ Y      + ALLL  +M+           R    P+ I+++ +L +C   S L++G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536

Query: 584 GICLFNEIEQIYGLRPILEH----FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
                 EI   Y ++  L       + +VD+  + G L  +  + +  P  ++ + W  +
Sbjct: 537 -----KEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 589

Query: 640 VSVSKLMANSKFSI--LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           +    +  N + +I  L    +  ++P +  +FI V    +  GM+DE  ++   M
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEV-TFISVFAACSHSGMVDEGLRIFYVM 644


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 208/674 (30%), Positives = 355/674 (52%), Gaps = 6/674 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +++  I   D    +A+H  +LK GS  D F  N L+N Y K      A  LFD M  R+
Sbjct: 55  MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++ +L +GY      +  +G+   ++R   + N H  +  L+    L+       +H+
Sbjct: 115 NVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHS 170

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G+++N FVG +LI+ Y   G    A  VF G+  KD+     ++  Y + G  E 
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFED 230

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           +  +   +  + F PN+YTF   +         +  K +HG  +K   V +  VG  ++ 
Sbjct: 231 SLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQ 290

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           +Y + G   +A ++F+ + + +++ W+ +I+ + ++G   +A++ F+   +  +  +   
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L+++++GC++     LG QLHG  +K G+  D+ +  AL+D+YAK   + +A  L    S
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K    +N ++ G+ E + +  +    +F +     +    VTFS  L   AS A +  G
Sbjct: 411 SKNEVSWNTVIVGY-ENLGEGGK-AFSMFREALRNQVSVTEVTFSSALGACASLASMDLG 468

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             +H  +IKT  A  V V N+LI MYAKCG I  A  +F  +   D+ SWNA++S Y+ H
Sbjct: 469 VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTH 528

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           GLG+ AL + + MK     P+ ++ LGVL  C  +GL + G   F  + + +G+ P LEH
Sbjct: 529 GLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEH 588

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           + CMV LLGR+G+L +AM LI   P+  S ++WR ++S S    N +F+  +++ +L + 
Sbjct: 589 YTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKIN 648

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           PKD  +++LVSNMYAG       A +R +M ++ + KE G SWIE    +H+F     DH
Sbjct: 649 PKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDH 708

Query: 724 PESEEIYSKLDLLN 737
           P+ + I   L+ LN
Sbjct: 709 PDMKLINGMLEWLN 722



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 6/419 (1%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            + H    +L  C    D I  + IH   +K G   ++F    L++ Y  +G  ++A N+
Sbjct: 47  LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  +  ++   V+F+ L    A +  +  +  +H    +  P  + FT+ + +       
Sbjct: 107 FDEMPERNN--VSFVTLAQGYACQDPIGLYSRLHREGHELNP--HVFTSFLKLFVSLDKA 162

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
           E    LH   VK G      VG A++  Y   G  + A  +F+ I  ++++ W  ++S Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           V +G+   ++         G   ++    T +         +    +HG  +K  Y+ D 
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
           R+G  L+ +Y + GD+  A  + +         ++ +++ F +    +E   + LF + R
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNE--AVDLFIRMR 340

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
            A + P+  T S +L+  A   C   G  LH   +K G+  D+ V NALI +YAKC  +D
Sbjct: 341 EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            A ++F  +S ++ VSWN ++  Y   G G  A  +F E  R   +  +++    L AC
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 154/350 (44%), Gaps = 35/350 (10%)

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           + + +  ++  C +       K +H   +K G   ++   N ++  Y K G  ++A  +F
Sbjct: 48  DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107

Query: 319 DAISERNLISWTALISGYV---------RSGHGGKAING--FLEFLDLGICCDSSCLATV 367
           D + ERN +S+  L  GY          R    G  +N   F  FL L +  D +     
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA----- 162

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
                     E+   LH   +K GY S+  +G AL++ Y+  G + SAR + +G  CK  
Sbjct: 163 ----------EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI 212

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +  I+S ++E      ED + L S  R+AG  P+  TF   L  S         + +H
Sbjct: 213 VVWAGIVSCYVEN--GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
              +KT Y  D  VG  L+ +Y + G +  AF++F  +   D+V W+ M++ +  +G   
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            A+ LF  M+     P++ ++  +L  C     S  G       EQ++GL
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG-------EQLHGL 373


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 225/676 (33%), Positives = 374/676 (55%), Gaps = 22/676 (3%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           V A +LKSGS +D +  + L++ +A+   LD A+ +F  +  R+A+T   LI G +    
Sbjct: 292 VFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHC 351

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIF-GEQIHAFAIKSGFEN-NV 194
            E  +GI     R     N  T  V+L A    S+ ED +  G ++H   +++G  +  +
Sbjct: 352 SEEAVGIFMGT-RDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKI 410

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            +   L++MY   G   +A  VFR L  +D    N +I   ++ G  E A   +  +   
Sbjct: 411 ALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQG 470

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              P+++   + +S C     +  G+Q+H  AVK+G+  + SV NA+V MYG  G   E+
Sbjct: 471 CISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSES 530

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKA--INGFLEFLDLGICCDSSCLATVIDGCS 372
             +F++++E +++SW +++ G + S H   A  +  F   +  G+  +      ++   S
Sbjct: 531 WEIFNSMAEHDIVSWNSIM-GVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALS 589

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA-EFN 431
             S LELG Q+H   +KHG + D  +  AL+  YAK GD+ S   L    S +  A  +N
Sbjct: 590 PLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWN 649

Query: 432 AILSGFMEK--IADDEEDV-MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           +++SG++    + +  + V +++ S Q L     D  TFS +L+  AS A L RG  +HA
Sbjct: 650 SMISGYIYNGHLQETMDCVWLMMHSNQML-----DCCTFSIVLNACASVAALERGMEMHA 704

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           + I++   +DV+V +AL+ MY+KCG ID A ++F  +S ++  SWN+M+S YA HGLG+ 
Sbjct: 705 FGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEK 764

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL +FEEM+R G  PD ++ + VL AC ++GL + G+  F  +E  +G+ P +EH++C++
Sbjct: 765 ALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMED-HGILPHIEHYSCVI 823

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL---ASKRLLDLEPK 665
           DLLGRAG+L +    IN  P   + L+WRT++   +   +     L   AS+ LL+LEP+
Sbjct: 824 DLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQ 883

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           +  +++L SN YA  G  ++ AK R  M    + KEAG SW+ +   +H F+A  + HP 
Sbjct: 884 NPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPN 943

Query: 726 SEEIYSKLDLLNDEMK 741
           ++EIY KL+ L  ++K
Sbjct: 944 TKEIYEKLNFLIQKIK 959



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 258/526 (49%), Gaps = 31/526 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G+    + +H  L+K G  +D F +N+L+NLYAK +RL  A+++FDGML R+A++WT L+
Sbjct: 70  GEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLV 129

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTC---SVILEACSLLEDRI--FGEQIHAFAI 186
            GY+  G  +    +   M     +F+  T      +L AC      +  F  Q+H    
Sbjct: 130 SGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVS 189

Query: 187 KSGFENNVFVGTSLISMYFHS--GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           K+ + +N  V  +LISMY +   G   +A+ VF     +D+   N ++  Y K G     
Sbjct: 190 KTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVST 249

Query: 245 FHVFVHLLSSD----FEPNDYTFTNVI---SVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           F +F+ +L  D      PN++TF ++I   S+   + GV +  Q+    +K G   ++ V
Sbjct: 250 FTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLD--QVFARVLKSGSSSDLYV 307

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G+A+V+ + +HGM +EA+ +F  + ERN ++   LI G V+     +A+  F+   D   
Sbjct: 308 GSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRD-SF 366

Query: 358 CCDSSCLATVIDGCSVCSNLELGL----QLHGFAIKHGYLS-DVRLGTALVDIYAKGGDL 412
             ++     ++   +  S  E GL    ++HG  ++ G +   + L   LV++YAK G +
Sbjct: 367 VVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI 426

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDE---EDVMVLFSQQRLAGMEPDPVTFSR 469
             A  +      +    +N I+S     + D     E  M+ +   R   + P       
Sbjct: 427 DKASRVFRLLCARDRVSWNTIIS-----VLDQNGFCEGAMMNYCMMRQGCISPSNFAAIS 481

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
            LS  AS   L  G+ +H  ++K G   D  V NAL+ MY  CG+   +++IF  +++ D
Sbjct: 482 GLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHD 541

Query: 530 IVSWNAMLSA-YALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           IVSWN+++    + H     ++ +F  M R G  P+ ++ + +L A
Sbjct: 542 IVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSA 587



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 54/97 (55%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G  +HAF ++S  ++D    + L+++Y+K  R+D A K+F+ M  ++  +W S+I G
Sbjct: 696 LERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISG 755

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           Y   G  E  L I  +M R+    +  T   +L ACS
Sbjct: 756 YARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACS 792


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 212/668 (31%), Positives = 358/668 (53%), Gaps = 7/668 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           GSG   + Q + +FL+KS    D +    LI+ Y K   +D A+ +FD +  +S +TWT+
Sbjct: 161 GSGRWMVFQ-LQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTT 219

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G +  G     L +   +       + +  S +L ACS+L     G+QIHA  ++ G
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E +  +   LI  Y   G  R A  +F G+  K++     ++  Y +    + A  +F 
Sbjct: 280 HEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFT 339

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +     +P+ +  +++++ C     +E G Q+H   +K  +  +  V N+++ MY K  
Sbjct: 340 SMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCD 399

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              EA ++FD  +  +++ + A+I GY R G   +  +    F D+        L T + 
Sbjct: 400 CLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVS 459

Query: 370 ---GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
                +  ++L L  Q+HG   K G   D+  G+AL+ +Y+    LK +R++ D    K 
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKD 519

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N++ SG++++   + E+ + LF + +L+   PD  TF  +++ + + A L  G+  
Sbjct: 520 LVIWNSMFSGYVQQ--SENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEF 577

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H   +K G   +  + NAL+ MYAKCGS + A + F   + RD+V WN+++S+YA HG G
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           + AL + E+M  EG  P+ I+ +GVL AC ++GL E G+  F E+   +G+ P  EH+ C
Sbjct: 638 RKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQF-ELMLRFGIEPETEHYVC 696

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           MV LLGRAGRL+EA  LI   P   + ++WR+L+S      N + +  A++  +  +PKD
Sbjct: 697 MVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKD 756

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
           +GSF L+SN+YA +GM  +A KVR  M    + KE G SWIEI+ ++H F++  K H ++
Sbjct: 757 SGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKA 816

Query: 727 EEIYSKLD 734
            +IY  LD
Sbjct: 817 NQIYEVLD 824



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 262/520 (50%), Gaps = 4/520 (0%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
            ++ +L+++      L     VH  ++ SG + DT+ +N L+NLY++   +  A+K+F+ 
Sbjct: 45  REFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEK 104

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLED--R 175
           M  R+ +TW++++      G YE  L +  D +R+ +   NE+  S  ++ACS L+   R
Sbjct: 105 MPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGR 164

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
               Q+ +F +KS F+ +V+VGT LI  Y   G    A  VF  L  K       MI   
Sbjct: 165 WMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGC 224

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            K G S ++  +F  L+  +  P+ Y  + V+S C     +E GKQ+H   +++G  ++ 
Sbjct: 225 VKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDA 284

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           S+ N ++  Y K G    A ++FD +  +N+ISWT L+SGY ++    +A+  F      
Sbjct: 285 SLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKF 344

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D    ++++  C+    LE G Q+H + IK    +D  +  +L+D+YAK   L  A
Sbjct: 345 GLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEA 404

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDE-EDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           R + D F+      FNA++ G+       E  D + +F   R   + P  +TF  LL  S
Sbjct: 405 RKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRAS 464

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           AS   L   + +H    K G   D+  G+ALI +Y+ C  +  +  +F  +  +D+V WN
Sbjct: 465 ASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWN 524

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +M S Y      + AL LF E++     PD+ + + ++ A
Sbjct: 525 SMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTA 564



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 1/279 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++ S     L L + +H  + K G   D F  + LI +Y+    L  ++ +FD M V+ 
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKD 519

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W S+  GY+   + E  L +  ++  S ++ +E T   ++ A   L     G++ H 
Sbjct: 520 LVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHC 579

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G E N ++  +L+ MY   G   +A   F   A +DV C N +I  Y   GE   
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRK 639

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +   ++    EPN  TF  V+S C     VE+G +   L ++FG+  E      +V+
Sbjct: 640 ALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVS 699

Query: 304 MYGKHGMSEEAERMFDAISERN-LISWTALISGYVRSGH 341
           + G+ G   EA  + + +  +   I W +L+SG  ++G+
Sbjct: 700 LLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGN 738


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  355 bits (910), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 210/709 (29%), Positives = 380/709 (53%), Gaps = 25/709 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYAKFNRLDVAQKLFDGM 119
           +P L+K      D++LG+ +HA + K G   D+   AN L+NLY K        K+FD +
Sbjct: 13  FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 72

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL---EDRI 176
             R+ ++W SLI        +E  L     M     + +  T   ++ ACS L   E  +
Sbjct: 73  SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM 132

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+Q+HA+ ++ G E N F+  +L++MY   G    ++ +      +D+   N ++    
Sbjct: 133 MGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 191

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           +  +   A      ++    EP+++T ++V+  C     +  GK+LH  A+K G + E S
Sbjct: 192 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 251

Query: 297 -VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD- 354
            VG+A+V MY          R+FD + +R +  W A+I+GY ++ H  +A+  F+   + 
Sbjct: 252 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 311

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G+  +S+ +A V+  C           +HGF +K G   D  +   L+D+Y++ G +  
Sbjct: 312 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 371

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR-----------LAGMEPD 463
           A  +      +    +N +++G++   ++  ED ++L  + +              ++P+
Sbjct: 372 AMRIFGKMEDRDLVTWNTMITGYV--FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 429

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
            +T   +L   A+ + L +G+ +HAY+IK   A DV VG+AL+ MYAKCG +  + ++F 
Sbjct: 430 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 489

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            I  +++++WN ++ AY +HG G+ A+ L   M  +G  P++++ + V  AC +SG+ + 
Sbjct: 490 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 549

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP--FSESPLLWRTLVS 641
           G+ +F  ++  YG+ P  +H+AC+VDLLGRAGR+ EA  L+N  P  F+++   W +L+ 
Sbjct: 550 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG-AWSSLLG 608

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
            S++  N +   +A++ L+ LEP  A  ++L++N+Y+  G+ D+A +VR  M +  + KE
Sbjct: 609 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 668

Query: 702 AGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSS 748
            GCSWIE   ++H FVA    HP+SE++   L+ L + M+ +  V D+S
Sbjct: 669 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTS 717



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 276/575 (48%), Gaps = 44/575 (7%)

Query: 143 VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE-NNVFVGTSLI 201
           VLGI  D Y             +L+A + L+D   G+QIHA   K G+  ++V V  +L+
Sbjct: 3   VLGIKPDNY---------AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLV 53

Query: 202 SMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY 261
           ++Y   G F     VF  ++ ++    N +I       + EMA   F  +L  + EP+ +
Sbjct: 54  NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSF 113

Query: 262 TFTNVISVCYENLGVEE----GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           T  +V++ C  NL + E    GKQ+H   ++ G +    + N +V MYGK G    ++ +
Sbjct: 114 TLVSVVTAC-SNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVL 171

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
             +   R+L++W  ++S   ++    +A+    E +  G+  D   +++V+  CS    L
Sbjct: 172 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 231

Query: 378 ELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
             G +LH +A+K+G L +   +G+ALVD+Y     + S R + DG   +    +NA+++G
Sbjct: 232 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 291

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           + +    D+E +++    +  AG+  +  T + ++          R  ++H + +K G  
Sbjct: 292 YSQN-EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 350

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            D  V N L+ MY++ G ID A +IF  + DRD+V+WN M++ Y      + ALLL  +M
Sbjct: 351 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 410

Query: 557 K-----------REGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIEQIYGLRPILEH- 603
           +           R    P+ I+++ +L +C   S L++G      EI   Y ++  L   
Sbjct: 411 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG-----KEI-HAYAIKNNLATD 464

Query: 604 ---FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI--LASKR 658
               + +VD+  + G L  +  + +  P  ++ + W  ++    +  N + +I  L    
Sbjct: 465 VAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 523

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           +  ++P +  +FI V    +  GM+DE  ++   M
Sbjct: 524 VQGVKPNEV-TFISVFAACSHSGMVDEGLRIFYVM 557


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 213/710 (30%), Positives = 370/710 (52%), Gaps = 10/710 (1%)

Query: 33  SPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQND 92
           S N ++ V  LC         RTL       ++++   S  LK G+ V  F+  +G   D
Sbjct: 74  SGNLENAVKLLCVSGKWDIDPRTLC-----SVLQLCADSKSLKDGKEVDNFIRGNGFVID 128

Query: 93  TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
           +   + L  +Y     L  A ++FD + +  A+ W  L+      GD+   +G+   M  
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
           S  + + +T S + ++ S L     GEQ+H F +KSGF     VG SL++ Y  +     
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS 248

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF  +  +DV   N +I  Y   G +E    VFV +L S  E +  T  +V + C +
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
           +  +  G+ +H + VK    RE    N ++ MY K G  + A+ +F  +S+R+++S+T++
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           I+GY R G  G+A+  F E  + GI  D   +  V++ C+    L+ G ++H +  ++  
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM--V 450
             D+ +  AL+D+YAK G ++ A ++      K    +N I+ G+ +    +E   +  +
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           L  ++R +   PD  T + +L   AS +   +GR +H Y ++ GY +D  V N+L+ MYA
Sbjct: 489 LLEEKRFS---PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG++  A  +F  I+ +D+VSW  M++ Y +HG GK A+ LF +M++ G   D+IS + 
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           +L AC +SGL + G   FN +     + P +EH+AC+VD+L R G L +A   I + P  
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
               +W  L+   ++  + K +   ++++ +LEP++ G ++L++N+YA     ++  ++R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
             +    L K  GCSWIEI  +++ FVA    +PE+E I + L  +   M
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 180/573 (31%), Positives = 325/573 (56%), Gaps = 9/573 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
              IH   +K+GF  ++FV T L+++Y   G    A  VF  L  ++V     ++  Y +
Sbjct: 83  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 142

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
                +A  +F+ +L +   P++YT   V++ C     +E GKQ+H   +K+ +  + S+
Sbjct: 143 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 202

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GN++ + Y K    E A + F  I E+++ISWT++IS    +G   ++++ F++ L  G+
Sbjct: 203 GNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGM 262

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +   L +V+  C V   L+LG Q+H  +IK GY S + +  +++ +Y K G L  A+ 
Sbjct: 263 KPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQK 322

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDV---------MVLFSQQRLAGMEPDPVTFS 468
           L +G        +NA+++G  + +   E+DV         + +F +   +GM+PD  TFS
Sbjct: 323 LFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFS 382

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +LS+ ++   L +G  +H   IK+G  ADV+VG AL++MY KCGSID A + F  +  R
Sbjct: 383 SVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSR 442

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
            ++SW +M++ +A HGL + AL LFE+M+  G  P+ ++ +GVL AC ++GL++  +  F
Sbjct: 443 TMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYF 502

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +++ Y ++P+++HFAC++D+  R GR+ EA ++++   F  +  +W  L++  +    
Sbjct: 503 ELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGK 562

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           S     A+++LL L+PKD  +++ + NM+   G   + +KVR  M + ++ K    SWI 
Sbjct: 563 SDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWIS 622

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           I  K++ F  + K H +S E+Y  L+ + +E+K
Sbjct: 623 IKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVK 655



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 170/310 (54%), Gaps = 11/310 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++ G+ VHA+L+K     DT   N+L + Y+KF RL+ A K F  +  +  I+WTS+I  
Sbjct: 181 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISS 240

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
             D+G     L    DM     K NE+T + +L AC ++     G QIH+ +IK G+ ++
Sbjct: 241 CCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS 300

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA---GESEMAFH---- 246
           + +  S++ +Y   G   EA+ +F G+   ++   N MI  + K     E ++A H    
Sbjct: 301 ILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGS 360

Query: 247 ----VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
               +F  L  S  +P+ +TF++V+SVC   + +E+G+Q+HG  +K GV+ ++ VG A+V
Sbjct: 361 TALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALV 420

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
           +MY K G  ++A + F  +  R +ISWT++I+G+ R G   +A+  F +   +GI  +  
Sbjct: 421 SMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQV 480

Query: 363 CLATVIDGCS 372
               V+  CS
Sbjct: 481 TFVGVLSACS 490



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 208/443 (46%), Gaps = 44/443 (9%)

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C +     E + +HG  VK G   ++ V   +V +Y K G+ E A ++FD +  RN+ +W
Sbjct: 74  CIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAW 133

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           T L++GYV++ H   A+  F++ L+ G    +  L  V++ CS   ++E G Q+H + IK
Sbjct: 134 TTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIK 193

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
           +    D  +G +L   Y+K   L+ A         K    + +++S   +         +
Sbjct: 194 YHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDN--GQAARSL 251

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
             F      GM+P+  T + +LS       L  G  +H+ SIK GY + +++ N+++ +Y
Sbjct: 252 SFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLY 311

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAY-----------ALHGLGKGALLLFEEMKR 558
            KCG +  A ++F+G+   ++V+WNAM++ +           A H  G  AL +F+++ R
Sbjct: 312 LKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR 371

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG-------LRPILEHFACMVDLL 611
            G  PD  +   VL  C         +    + EQI+G       L  ++   A +V + 
Sbjct: 372 SGMKPDLFTFSSVLSVC-------SNLVALEQGEQIHGQIIKSGVLADVVVGTA-LVSMY 423

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL--------MANSKFSILASKRLLDLE 663
            + G + +A     S  F E P   RT++S + +        ++     +    RL+ ++
Sbjct: 424 NKCGSIDKA-----SKAFLEMPS--RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 476

Query: 664 PKDAGSFILVSNMYAGQGMLDEA 686
           P    +F+ V +  +  G+ DEA
Sbjct: 477 PNQV-TFVGVLSACSHAGLADEA 498


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 209/668 (31%), Positives = 358/668 (53%), Gaps = 3/668 (0%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT-WTSLIKGYL 135
            G+ +H +++++  + D +    LI +Y+  +R   A  LF  +  RS I  W  +I G++
Sbjct: 566  GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFV 625

Query: 136  DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            ++G +E  L +         K    + +    ACS  E   FG Q+H   IK  F+++ +
Sbjct: 626  ENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPY 685

Query: 196  VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
            V TSL++MY  SG   +A+ VF  +  K+V   N MI  +   G +  A  ++  + + +
Sbjct: 686  VCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGE 745

Query: 256  FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
               + +T ++++S C      + G+ +H   +K  +   +++ +A++TMY K G +E+A+
Sbjct: 746  TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 805

Query: 316  RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
             +F  + ER++++W ++I+G+ ++     A++ F      G+  DS  + +VI       
Sbjct: 806  SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 865

Query: 376  NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            N+ELG  +HGFAIK G  SDV +  +LVD+Y+K G  +SA M+      K    +N+++S
Sbjct: 866  NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 925

Query: 436  GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
             +        E  + L  Q    G   D V+ + +L   +S A L++G++LHAY I+   
Sbjct: 926  CY--SWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQI 983

Query: 496  AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +D+ V NALI MY KCG +  A  IF+ +  R++V+WN+M++ Y  HG  + A+ LF+E
Sbjct: 984  PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKE 1043

Query: 556  MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
            MKR   APD+++ L ++ +C +SG+ E G+ LF  +   YG+ P +EH+A +VDLLGRAG
Sbjct: 1044 MKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAG 1103

Query: 616  RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
            RL +A + I   P      +W  L+   +   N +   L +  LL +EP    +++ + N
Sbjct: 1104 RLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLN 1163

Query: 676  MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
            +Y    M D AA +R +M    L K  GCSWIE+ +++  F +         EIY  L  
Sbjct: 1164 LYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSS 1223

Query: 736  LNDEMKLK 743
            L   M+ K
Sbjct: 1224 LKSNMEGK 1231



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 263/522 (50%), Gaps = 12/522 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K      +L  G+ +HA ++  G Q+D + A +LIN+Y K   L  A ++FD M 
Sbjct: 444 FPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMS 503

Query: 121 -----VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
                      W  +I GY   G +E  L   C M     + + ++ S++L  C+ L   
Sbjct: 504 ESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWY 563

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR--EAENVFRGLAYK-DVRCVNFMI 232
           + G QIH + I++ FE + ++ T+LI MY  S C R  EA ++F  L  + ++   N MI
Sbjct: 564 MAGRQIHGYIIRNMFEGDPYLETALIGMY--SSCSRPMEAWSLFGKLENRSNIVAWNVMI 621

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             + + G  E +  ++    + + +    +FT   + C     ++ G+Q+H   +K    
Sbjct: 622 GGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQ 681

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            +  V  +++TMY K G  E+A+++FD + ++ +    A+IS ++ +G    A+  + + 
Sbjct: 682 DDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM 741

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
                  DS  +++++ GCSV  + + G  +H   IK    S+V + +AL+ +Y K G  
Sbjct: 742 KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGST 801

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           + A  +      +    + ++++GF +      +D + LF      G++ D    + ++S
Sbjct: 802 EDADSVFYTMKERDVVAWGSMIAGFCQN--RRFKDALDLFRAMEKEGVKADSDVMTSVIS 859

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
                  +  G  +H ++IK G  +DV V  +L+ MY+K G  + A  +F  + ++++V+
Sbjct: 860 AGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVA 919

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           WN+M+S Y+ +GL + ++ L  ++ + GF  D +SI  VL A
Sbjct: 920 WNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVA 961



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 236/472 (50%), Gaps = 4/472 (0%)

Query: 74   LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            L  G+ VH  ++K   Q+D +   +L+ +YAK   ++ A+K+FD +L +      ++I  
Sbjct: 665  LDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISA 724

Query: 134  YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            ++ +G     LG+   M   E   +  T S +L  CS++    FG  +HA  IK   ++N
Sbjct: 725  FIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN 784

Query: 194  VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            V + ++L++MY+  G   +A++VF  +  +DV     MI  + +    + A  +F  +  
Sbjct: 785  VAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEK 844

Query: 254  SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               + +    T+VIS       VE G  +HG A+K G+  ++ V  ++V MY K G +E 
Sbjct: 845  EGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAES 904

Query: 314  AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
            AE +F ++  +NL++W ++IS Y  +G    +IN   + L  G   DS  + TV+   S 
Sbjct: 905  AEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSS 964

Query: 374  CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             + L  G  LH + I+    SD+++  AL+D+Y K G LK A+++ +    +    +N++
Sbjct: 965  VAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSM 1024

Query: 434  LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-HAYSIK 492
            ++G+      + E+ + LF + + +   PD VTF  L++  +    +  G +L     I+
Sbjct: 1025 IAGYGSH--GNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIE 1082

Query: 493  TGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
             G    +    +++ +  + G +D A+   +G+  D D   W  +L A   H
Sbjct: 1083 YGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAH 1134



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 243/521 (46%), Gaps = 18/521 (3%)

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           IK  +  G Y   L +      S     + T   +L+ C+ L +   G  IHA  +  G 
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGL-----AYKDVRCVNFMILEYNKAGESEMAF 245
           +++ ++ TSLI+MY   G    A  VF  +     +  D+   N +I  Y K G  E   
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
             F  +      P+ Y+ + V+ +C        G+Q+HG  ++     +  +  A++ MY
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 592

Query: 306 GKHGMSEEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
                  EA  +F  +  R N+++W  +I G+V +G   K++  +    +      S+  
Sbjct: 593 SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 652

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
                 CS    L+ G Q+H   IK  +  D  + T+L+ +YAK G ++ A+ + D    
Sbjct: 653 TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 712

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K     NA++S F+        D + L+++ +      D  T S LLS  +       GR
Sbjct: 713 KEVELRNAMISAFIGN--GRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGR 770

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
           ++HA  IK    ++V + +AL+TMY KCGS + A  +F  + +RD+V+W +M++ +  + 
Sbjct: 771 TVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNR 830

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH- 603
             K AL LF  M++EG   D      V+ + I +GL    + L + I   + ++  LE  
Sbjct: 831 RFKDALDLFRAMEKEGVKADS----DVMTSVISAGLGLENVELGHLIHG-FAIKRGLESD 885

Query: 604 --FAC-MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
              AC +VD+  + G  +E+  ++ SS  +++ + W +++S
Sbjct: 886 VFVACSLVDMYSKFG-FAESAEMVFSSMPNKNLVAWNSMIS 925



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 166/352 (47%), Gaps = 1/352 (0%)

Query: 72   GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            G    G+ VHA ++K   Q++    + L+ +Y K    + A  +F  M  R  + W S+I
Sbjct: 764  GSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMI 823

Query: 132  KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             G+  +  ++  L +   M +   K +    + ++ A   LE+   G  IH FAIK G E
Sbjct: 824  AGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLE 883

Query: 192  NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            ++VFV  SL+ MY   G    AE VF  +  K++   N MI  Y+  G  EM+ ++   +
Sbjct: 884  SDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQI 943

Query: 252  LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            L   F  +  + T V+        + +GK LH   ++  +  ++ V NA++ MY K G  
Sbjct: 944  LQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCL 1003

Query: 312  EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            + A+ +F+ +  RNL++W ++I+GY   G+  +A+  F E        D      +I  C
Sbjct: 1004 KYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSC 1063

Query: 372  SVCSNLELGLQLHGFA-IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            S    +E GL L     I++G    +    ++VD+  + G L  A   + G 
Sbjct: 1064 SHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGM 1115



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 131/252 (51%), Gaps = 1/252 (0%)

Query: 64   LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
            ++   +G  +++LG  +H F +K G ++D F A +L+++Y+KF   + A+ +F  M  ++
Sbjct: 857  VISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKN 916

Query: 124  AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             + W S+I  Y  +G  E  + +   + +     +  + + +L A S +   + G+ +HA
Sbjct: 917  LVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHA 976

Query: 184  FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            + I+    +++ V  +LI MY   GC + A+ +F  +  +++   N MI  Y   G  E 
Sbjct: 977  YQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEE 1036

Query: 244  AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA-VKFGVVREISVGNAIV 302
            A  +F  +  S+  P++ TF  +I+ C  +  VEEG  L  L  +++GV   +    ++V
Sbjct: 1037 AVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVV 1096

Query: 303  TMYGKHGMSEEA 314
             + G+ G  ++A
Sbjct: 1097 DLLGRAGRLDDA 1108


>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 753

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 216/685 (31%), Positives = 358/685 (52%), Gaps = 10/685 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           + +L + +  SG L LG+  H  ++KS      +  NNL+N+Y K   L  A++LFD M 
Sbjct: 51  YKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 110

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ I++ SLI GY   G YE  + +  +      K ++ T +  L  C    D  FG+ 
Sbjct: 111 ERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKL 170

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H   + +G    VF+   LI MY   G   +A ++F     +D    N +I  Y + G 
Sbjct: 171 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGA 230

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG---VEEGKQLHGLAVKFGVVREISV 297
           +E   ++   +  +  +   Y   +V+  C  NL    +E+G  +H  A K G+  +I V
Sbjct: 231 AEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVV 290

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH-----GGKAINGFLEF 352
             A++ MY K+G  +EA ++F  +  +N++++ A+ISG+++          +A   F+E 
Sbjct: 291 RTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEM 350

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
              G+    S  + V+  CS    LE G Q+H    K+ + SD  +G+AL+++YA  G  
Sbjct: 351 QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST 410

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           +         S +  A + +I+   ++   +  E    LF Q   + + P+  T S ++S
Sbjct: 411 EDGMQCFASTSKQDIASWTSIIDCHVQN--EQLESAFDLFRQLFSSPIRPEEYTVSLMMS 468

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
             A  A L  G  +  Y+IK+G  A   V  + I+MYAK G++  A ++F  + + D+ +
Sbjct: 469 ACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVAT 528

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           ++AM+S+ A HG    AL +FE MK  G  P+  + LGVL AC + GL   G+  F  ++
Sbjct: 529 YSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMK 588

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
             YG+ P  +HF C+ DLLGR GRLS+A NLI SS F + P++WR L+S  ++  +S   
Sbjct: 589 NSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVMWRALLSSCRVYKDSVIG 648

Query: 653 ILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
              ++RL++LEP+ +GS++L+ N+Y   G+   A +VR  M D  + KE   SWI + ++
Sbjct: 649 KRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVLGNQ 708

Query: 713 LHHFVASGKDHPESEEIYSKLDLLN 737
            H F  +   HP S+ IY+ LD +N
Sbjct: 709 THSFAVADWSHPSSQMIYTMLDTMN 733


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 205/607 (33%), Positives = 328/607 (54%), Gaps = 5/607 (0%)

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           YL  G Y ++L    DM  S+ + ++ T  ++L     ++    G+Q+H  A+K G +  
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + V  SLI+MY     F  A  VF  ++ +D+   N +I    + G    A  +F+ LL 
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409

Query: 254 SDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              +P+ YT T+V+        G+   KQ+H  A+K   V +  V  A++  Y ++   +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EAE +F+     +L++W A+++GY +S  G K +  F      G   D   LATV   C 
Sbjct: 470 EAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               +  G Q+H +AIK GY  D+ + + ++D+Y K GD+ +A+   D         +  
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++SG +E    +EE    +FSQ RL G+ PD  T + L   S+    L +GR +HA ++K
Sbjct: 589 MISGCIEN--GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK 646

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                D  VG +L+ MYAKCGSID A+ +FK I   +I +WNAML   A HG GK  L L
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F++MK  G  PD ++ +GVL AC +SGL          +   YG++P +EH++C+ D LG
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG + +A NLI S     S  ++RTL++  ++  +++     + +LL+LEP D+ +++L
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVL 826

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SNMYA     DE    RT M   ++ K+ G SWIE+ +K+H FV   + + ++E IY K
Sbjct: 827 LSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRK 886

Query: 733 L-DLLND 738
           + D++ D
Sbjct: 887 VKDMIRD 893



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 164/635 (25%), Positives = 299/635 (47%), Gaps = 43/635 (6%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K+ + SG +   ++ H +  K G   D F A  L+N+Y KF ++   + LF+ M  R 
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W  ++K YL+ G  E  + ++   + S    NE T  ++         RI G+   A
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA--------RISGDDSDA 262

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +KS F N    G    S+         +E +FR          N  + EY  +G+   
Sbjct: 263 GQVKS-FAN----GNDASSV---------SEIIFR----------NKGLSEYLHSGQYSA 298

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
               F  ++ SD E +  TF  +++   +   +  G+Q+H +A+K G+   ++V N+++ 
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K      A  +FD +SER+LISW ++I+G  ++G   +A+  F++ L  G+  D   
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418

Query: 364 LATVIDGC-SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           + +V+    S+   L L  Q+H  AIK   +SD  + TAL+D Y++   +K A +L +  
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH 478

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
           +    A +NA+++G+ +  + D    + LF+     G   D  T + +         + +
Sbjct: 479 NFDLVA-WNAMMAGYTQ--SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +HAY+IK+GY  D+ V + ++ MY KCG +  A   F  I   D V+W  M+S    
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQA--CIYSGLSEGGICLFNEIEQIYGLRPI 600
           +G  + A  +F +M+  G  PD+ +I  + +A  C+ + L +G     N ++      P 
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL-TALEQGRQIHANALKLNCTNDPF 654

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL-MANSKFSILASKRL 659
           +     +VD+  + G + +A  L               LV +++         +    + 
Sbjct: 655 VG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           L ++P D  +FI V +  +  G++ EA K   +M+
Sbjct: 713 LGIKP-DKVTFIGVLSACSHSGLVSEAYKHMRSMH 746



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 150/618 (24%), Positives = 276/618 (44%), Gaps = 53/618 (8%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W   ++ +I S DL LG+  HA +L      + F  NNLI++Y+K   L  A+++FD M 
Sbjct: 42  WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101

Query: 121 VRSAITWTSLIKGYLDDGD--YESVLG--IACDMYRSEEKFNEH-TCSVILEACSLLEDR 175
            R  ++W S++  Y    +   E++    +   + R +  +    T S +L+ C L    
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC-LHSGY 160

Query: 176 IFG-EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
           ++  E  H +A K G + + FV  +L+++Y   G  +E + +F  + Y+DV   N M+  
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
           Y + G  E A  +     SS   PN+ T   +              ++ G     G V+ 
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL-------------ARISGDDSDAGQVKS 267

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
            + GN                   DA S   +I     +S Y+ SG     +  F + ++
Sbjct: 268 FANGN-------------------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             + CD      ++       +L LG Q+H  A+K G    + +  +L+++Y K      
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADD--EEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           AR + D  S +    +N++++G    IA +  E + + LF Q    G++PD  T + +L 
Sbjct: 369 ARTVFDNMSERDLISWNSVIAG----IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424

Query: 473 LSAS-QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
            ++S    L   + +H ++IK    +D  V  ALI  Y++   +  A  +F+   + D+V
Sbjct: 425 AASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLV 483

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEGGICLFNE 590
           +WNAM++ Y     G   L LF  M ++G   DD ++  V + C +   +++G       
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMAN 648
           I+  Y L   +   + ++D+  + G +S A    +S P  +  + W T++S  +      
Sbjct: 544 IKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPDD-VAWTTMISGCIENGEEE 600

Query: 649 SKFSILASKRLLDLEPKD 666
             F + +  RL+ + P +
Sbjct: 601 RAFHVFSQMRLMGVLPDE 618



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 169/359 (47%), Gaps = 8/359 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L L + VH   +K  + +D+F +  LI+ Y++   +  A+ LF+       + W +++ G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAG 491

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y    D    L +   M++  E+ ++ T + + + C  L     G+Q+HA+AIKSG++ +
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           ++V + ++ MY   G    A+  F  +   D      MI    + GE E AFHVF  +  
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+++T   +         +E+G+Q+H  A+K     +  VG ++V MY K G  ++
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS- 372
           A  +F  I   N+ +W A++ G  + G G + +  F +   LGI  D      V+  CS 
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731

Query: 373 ---VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
              V    +    +HG    +G   ++   + L D   + G +K A  L++  S + +A
Sbjct: 732 SGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASA 787


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 210/689 (30%), Positives = 368/689 (53%), Gaps = 15/689 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           ++ + + +HA LL  G   D      L+ LYA    L ++   F  +  ++  +W S++ 
Sbjct: 63  NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVS 122

Query: 133 GYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            Y+  G Y   +    ++   S  + + +T   +L+AC  L D   GE++H + +K GFE
Sbjct: 123 AYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFE 179

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++V+V  SLI +Y   G    A  VF  +  +DV   N MI  + + G    A  V   +
Sbjct: 180 HDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRM 239

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            + + + +  T ++++ +C ++  V  G  +H   +K G+  ++ V NA++ MY K G  
Sbjct: 240 KTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRL 299

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A+R+FD +  R+L+SW ++I+ Y ++     A+  F E L +G+  D   L TV+   
Sbjct: 300 QDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPD---LLTVVSLA 356

Query: 372 SV---CSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           S+    S+  +G  +HGF ++  +L  D+ +G ALV++YAK G +  AR + +    +  
Sbjct: 357 SIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDV 416

Query: 428 AEFNAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
             +N +++G+ +  +A +  D   +  + R   + P+  T+  +L   +    L +G  +
Sbjct: 417 ISWNTLITGYAQNGLASEAIDAYNMMEEGRT--IVPNQGTWVSILPAYSHVGALQQGMKI 474

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H   IK     DV V   LI MY KCG ++ A  +F  I     V WNA++S+  +HG G
Sbjct: 475 HGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHG 534

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           + AL LF++M+ +G   D I+ + +L AC +SGL +     F+ +++ Y ++P L+H+ C
Sbjct: 535 EKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGC 594

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           MVDL GRAG L +A NL+++ P      +W TL++  ++  N++    AS RLL+++ ++
Sbjct: 595 MVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSEN 654

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
            G ++L+SN+YA  G  + A KVR+   D  L K  G S + + S +  F A  + HP+ 
Sbjct: 655 VGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQC 714

Query: 727 EEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
            EIY +L +LN +MK L      +F LQD
Sbjct: 715 AEIYEELRVLNAKMKSLGYVPDYSFVLQD 743



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 4/312 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ I   S D+  G  VH +++K G ++D F +N LIN+Y+KF RL  AQ++FDGM VR 
Sbjct: 254 MLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRD 313

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W S+I  Y  + D  + LG   +M     + +  T   +      L DR  G  +H 
Sbjct: 314 LVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHG 373

Query: 184 FAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           F ++  + E ++ +G +L++MY   G    A  VF  L  +DV   N +I  Y + G + 
Sbjct: 374 FVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLAS 433

Query: 243 MAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNA 300
            A   +  +       PN  T+ +++   Y ++G +++G ++HG  +K  +  ++ V   
Sbjct: 434 EAIDAYNMMEEGRTIVPNQGTWVSILPA-YSHVGALQQGMKIHGRLIKNCLFLDVFVATC 492

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MYGK G  E+A  +F  I +   + W A+IS     GHG KA+  F +    G+  D
Sbjct: 493 LIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKAD 552

Query: 361 SSCLATVIDGCS 372
                +++  CS
Sbjct: 553 HITFVSLLSACS 564



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 162/349 (46%), Gaps = 37/349 (10%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           C+N+ +  QLH   +  G   DV L T LV +YA  GDL  +         K    +N++
Sbjct: 61  CTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSM 120

Query: 434 LSGFME--KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC--LVRGRSLHAY 489
           +S ++   +  D  + V  L S   L+G+ PD  TF  +L     +AC  L  G  +H +
Sbjct: 121 VSAYVRRGRYRDSMDCVTELLS---LSGVRPDFYTFPPVL-----KACLSLADGEKMHCW 172

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            +K G+  DV V  +LI +Y++ G+++ A ++F  +  RD+ SWNAM+S +  +G    A
Sbjct: 173 VLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEA 232

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L + + MK E    D +++  +L  C  S    GG+ +   + + +GL   +     +++
Sbjct: 233 LRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIK-HGLESDVFVSNALIN 291

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           +  + GRL +A  + +           R LVS +        SI+A+    D +P  A  
Sbjct: 292 MYSKFGRLQDAQRVFDGMEV-------RDLVSWN--------SIIAAYEQND-DPVTALG 335

Query: 670 F---ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAG-----CSWIEID 710
           F   +L   M      +   A +   ++D R+ +        C W+E+D
Sbjct: 336 FFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVD 384



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 14/234 (5%)

Query: 54  RTLLFND--WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV 111
           RT++ N   W  ++      G L+ G  +H  L+K+    D F A  LI++Y K  RL+ 
Sbjct: 446 RTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLED 505

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS- 170
           A  LF  +   +++ W ++I      G  E  L +  DM     K +  T   +L ACS 
Sbjct: 506 AMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSH 565

Query: 171 --LLEDR--IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DV 225
             L+++    F      + IK   ++       ++ ++  +G   +A N+   +  + D 
Sbjct: 566 SGLVDEAQWCFDTMQKEYRIKPNLKHY----GCMVDLFGRAGYLEKAYNLVSNMPIQADA 621

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
                ++      G +E+       LL  D E   Y    ++S  Y N+G  EG
Sbjct: 622 SIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYV--LLSNIYANVGKWEG 673


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 180/573 (31%), Positives = 325/573 (56%), Gaps = 9/573 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
              IH   +K+GF  ++FV T L+++Y   G    A  VF  L  ++V     ++  Y +
Sbjct: 77  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
                +A  +F+ +L +   P++YT   V++ C     +E GKQ+H   +K+ +  + S+
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 196

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GN++ + Y K    E A + F  I E+++ISWT++IS    +G   ++++ F++ L  G+
Sbjct: 197 GNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGM 256

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +   L +V+  C V   L+LG Q+H  +IK GY S + +  +++ +Y K G L  A+ 
Sbjct: 257 KPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQK 316

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDV---------MVLFSQQRLAGMEPDPVTFS 468
           L +G        +NA+++G  + +   E+DV         + +F +   +GM+PD  TFS
Sbjct: 317 LFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFS 376

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +LS+ ++   L +G  +H   IK+G  ADV+VG AL++MY KCGSID A + F  +  R
Sbjct: 377 SVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSR 436

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
            ++SW +M++ +A HGL + AL LFE+M+  G  P+ ++ +GVL AC ++GL++  +  F
Sbjct: 437 TMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYF 496

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +++ Y ++P+++HFAC++D+  R GR+ EA ++++   F  +  +W  L++  +    
Sbjct: 497 ELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGK 556

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           S     A+++LL L+PKD  +++ + NM+   G   + +KVR  M + ++ K    SWI 
Sbjct: 557 SDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWIS 616

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           I  K++ F  + K H +S E+Y  L+ + +E+K
Sbjct: 617 IKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVK 649



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 248/504 (49%), Gaps = 19/504 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            + +H  ++K+G   D F    L+N+Y+K   ++ A K+FD +  R+   WT+L+ GY+ 
Sbjct: 77  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +      L +   M  +    + +T  ++L ACS L+   FG+Q+HA+ IK   + +  +
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 196

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G SL S Y        A   F+ +  KDV     +I      G++  +   F+ +LS   
Sbjct: 197 GNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGM 256

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +PN+YT T+V+S C   L ++ G Q+H L++K G    I + N+I+ +Y K G   EA++
Sbjct: 257 KPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQK 316

Query: 317 MFDAISERNLISWTALISGYVR---------SGH--GGKAINGFLEFLDLGICCDSSCLA 365
           +F+ +   NL++W A+I+G+ +         + H  G  A+  F +    G+  D    +
Sbjct: 317 LFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFS 376

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +V+  CS    LE G Q+HG  IK G L+DV +GTALV +Y K G +  A         +
Sbjct: 377 SVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSR 436

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               + ++++GF        +  + LF   RL G++P+ VTF  +LS + S A L     
Sbjct: 437 TMISWTSMITGFARH--GLSQQALQLFEDMRLVGIKPNQVTFVGVLS-ACSHAGLADEAL 493

Query: 486 LHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
            +   ++  Y    ++ +   LI MY + G ++ AF +   ++ + +   W+ +++    
Sbjct: 494 YYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRS 553

Query: 543 HGLGKGALLLFEEMKREGFAPDDI 566
           H  GK  L  +   +     P D+
Sbjct: 554 H--GKSDLGFYAAEQLLKLKPKDV 575



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 170/310 (54%), Gaps = 11/310 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++ G+ VHA+L+K     DT   N+L + Y+KF RL+ A K F  +  +  I+WTS+I  
Sbjct: 175 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISS 234

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
             D+G     L    DM     K NE+T + +L AC ++     G QIH+ +IK G+ ++
Sbjct: 235 CCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS 294

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA---GESEMAFH---- 246
           + +  S++ +Y   G   EA+ +F G+   ++   N MI  + K     E ++A H    
Sbjct: 295 ILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGS 354

Query: 247 ----VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
               +F  L  S  +P+ +TF++V+SVC   + +E+G+Q+HG  +K GV+ ++ VG A+V
Sbjct: 355 TALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALV 414

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
           +MY K G  ++A + F  +  R +ISWT++I+G+ R G   +A+  F +   +GI  +  
Sbjct: 415 SMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQV 474

Query: 363 CLATVIDGCS 372
               V+  CS
Sbjct: 475 TFVGVLSACS 484



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 208/443 (46%), Gaps = 44/443 (9%)

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C +     E + +HG  VK G   ++ V   +V +Y K G+ E A ++FD +  RN+ +W
Sbjct: 68  CIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAW 127

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           T L++GYV++ H   A+  F++ L+ G    +  L  V++ CS   ++E G Q+H + IK
Sbjct: 128 TTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIK 187

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
           +    D  +G +L   Y+K   L+ A         K    + +++S   +         +
Sbjct: 188 YHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDN--GQAARSL 245

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
             F      GM+P+  T + +LS       L  G  +H+ SIK GY + +++ N+++ +Y
Sbjct: 246 SFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLY 305

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAY-----------ALHGLGKGALLLFEEMKR 558
            KCG +  A ++F+G+   ++V+WNAM++ +           A H  G  AL +F+++ R
Sbjct: 306 LKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR 365

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG-------LRPILEHFACMVDLL 611
            G  PD  +   VL  C         +    + EQI+G       L  ++   A +V + 
Sbjct: 366 SGMKPDLFTFSSVLSVC-------SNLVALEQGEQIHGQIIKSGVLADVVVGTA-LVSMY 417

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL--------MANSKFSILASKRLLDLE 663
            + G + +A     S  F E P   RT++S + +        ++     +    RL+ ++
Sbjct: 418 NKCGSIDKA-----SKAFLEMPS--RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 470

Query: 664 PKDAGSFILVSNMYAGQGMLDEA 686
           P    +F+ V +  +  G+ DEA
Sbjct: 471 PNQV-TFVGVLSACSHAGLADEA 492


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 217/696 (31%), Positives = 377/696 (54%), Gaps = 13/696 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K+S    D   G+ +H   +K G  +D     +L++ Y K +     + +FD M  R+
Sbjct: 103 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERN 162

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE--QI 181
            +TWT+LI GY  +   E VL +   M     + N  T +  L    L E+ + G   Q+
Sbjct: 163 VVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGV--LAEEGVGGRGLQV 220

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   +K+G +  + V  SLI++Y   G  R+A  +F     K V   N MI  Y   G  
Sbjct: 221 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 280

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A  +F  +  +    ++ +F ++I +C     +   +QLH   VK+G V + ++  A+
Sbjct: 281 LEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTAL 340

Query: 302 VTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +  Y K     +A R+F       N++SWTA+ISG++++    +A+  F E    G+  +
Sbjct: 341 MVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPN 400

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               + ++    V S  E+    H   +K  Y     +GTAL+D Y K G +  A  +  
Sbjct: 401 EFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFS 456

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL-SASQAC 479
           G   K    ++A+L+G+ +  A + E  + +FS+    G++P+  TFS +L++ +A+ A 
Sbjct: 457 GIDNKDIVAWSAMLAGYAQ--AGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTAS 514

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           + +G+  H ++IK+   + + V +AL+TMYAK G I+ A ++FK   ++D+VSWN+M+S 
Sbjct: 515 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISG 574

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           YA HG    AL +F+EMK+     D ++ +GV  AC ++GL E G   F+ + +   + P
Sbjct: 575 YAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 634

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             EH +CMVDL  RAG+L +AM +I++ P      +WRT+++  ++   ++   LA++++
Sbjct: 635 TKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKI 694

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           + + P+D+ +++L+SNMYA  G   E AKVR  MN+  + KE G SWIE+ +K + F+A 
Sbjct: 695 IAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAG 754

Query: 720 GKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
            + HP  ++IY KL+ L+  +K L  +  +++ LQD
Sbjct: 755 DRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQD 790



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 249/499 (49%), Gaps = 17/499 (3%)

Query: 96  ANNLINLYAKF----------NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLG 145
           AN L NL   F          +RL  A  LFD    R   ++TSL+ G+  DG  +    
Sbjct: 24  ANELGNLKPNFRIYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATR 83

Query: 146 IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYF 205
           +  ++     + +    S +L+  + L D +FG Q+H   IK GF ++V VGTSL+  Y 
Sbjct: 84  LFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 143

Query: 206 HSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
               F++  NVF  +  ++V     +I  Y +   +E    +F+ +     +PN +TF  
Sbjct: 144 KGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAA 203

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
            + V  E      G Q+H + VK G+ + I V N+++ +Y K G   +A  +FD    ++
Sbjct: 204 ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 263

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
           +++W ++ISGY  +G   +A+  F       +    S  A++I  C+    L    QLH 
Sbjct: 264 VVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHC 323

Query: 386 FAIKHGYLSDVRLGTALVDIYAKG-GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
             +K+G++ D  + TAL+  Y+K    L + R+  +         + A++SGF++   D 
Sbjct: 324 SVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQN--DG 381

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
           +E+ + LFS+ +  G+ P+  T+S +L+       ++    +HA  +KT Y     VG A
Sbjct: 382 KEEAVGLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTA 437

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           L+  Y K G +D A ++F GI ++DIV+W+AML+ YA  G  + A+ +F E+ + G  P+
Sbjct: 438 LLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPN 497

Query: 565 DISILGVLQACIYSGLSEG 583
           + +   +L  C  +  S G
Sbjct: 498 EFTFSSILNVCAATTASMG 516



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 4/235 (1%)

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
           A    L  A  L D    +    + ++L GF  +    +E   +  + Q L GME D   
Sbjct: 42  ASSSRLYYAHNLFDKSPDRDRESYTSLLFGF-SRDGRTQEATRLFLNIQHL-GMEMDCSI 99

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           FS +L +SA+    + GR LH   IK G+  DV VG +L+  Y K  +      +F  + 
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           +R++V+W  ++S YA + L +  L LF  M+ EG  P+  +    L      G+   G+ 
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +   + +  GL   +     +++L  + G + +A  L + +   +S + W +++S
Sbjct: 220 VHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVVTWNSMIS 272


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 212/638 (33%), Positives = 346/638 (54%), Gaps = 15/638 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+ G+ V A ++K G++ D F   ++++LYAK   +  A+++F  +   S ++WT ++ 
Sbjct: 88  ELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLS 146

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY    D  S L I  +M  S  + N  T + ++ AC          Q+HA+  KSGF  
Sbjct: 147 GYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYL 206

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR---CVNFMILEYNKAGESEMAFHVFV 249
           +  V  +LISM   SG    +E VF  L   D+R    VN M+  +++  +   A  +F 
Sbjct: 207 DTSVAAALISMNSKSGDINLSERVFEDL--DDIRRQNIVNVMVTSFSQNKKPGKAIRLFT 264

Query: 250 HLLSSDFEPNDYTFTNVISV--CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
            +L     P++++  +++SV  C  NLG    KQ+H   +K G++ +++VG+++ TMY K
Sbjct: 265 RMLQEGLNPDEFSVCSLLSVLDCL-NLG----KQVHSYTLKSGLILDLTVGSSLFTMYSK 319

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G  EE+  +F  I  ++   W ++ISG+   G+  +AI  F E LD G   D S LA V
Sbjct: 320 CGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAV 379

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  CS   +L    ++HG+ ++ G    + LG+ALV+ Y+K G LK AR + D       
Sbjct: 380 LTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDP 439

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
              ++++SG+ +      +D  +LF    ++G   D    S +L  +        G  +H
Sbjct: 440 VSCSSLISGYSQH--GLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVH 497

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           AY  K G   +  VG++L+TMY+K GSI+   + F  I+  D+++W A++++YA HG   
Sbjct: 498 AYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYAQHGKAN 557

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL ++  MK +GF PD ++ +GVL AC + GL E G    N + + YG+ P   H+ CM
Sbjct: 558 EALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCM 617

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VD LGR+GRL EA N IN+ P     L+W TL++  K+  + +   LA+K+ ++LEP DA
Sbjct: 618 VDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIELEPSDA 677

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
           G+++ +SN+ A  G  DE  + R  M    + KE G S
Sbjct: 678 GAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 715



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/501 (30%), Positives = 264/501 (52%), Gaps = 11/501 (2%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           ++LI+ ++K  R + A K+F   L  +   W ++I G L + +Y +V  +  +M    +K
Sbjct: 11  SSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQK 70

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            + +T S +L AC+ LE+  FG+ + A  IK G E +VFV TS++ +Y   G   EA  V
Sbjct: 71  PDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAREV 129

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  ++   V     M+  Y K+ ++  A  +F  +  S  E N  T T+VIS C     V
Sbjct: 130 FSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMV 189

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF---DAISERNLISWTALI 333
            E  Q+H    K G   + SV  A+++M  K G    +ER+F   D I  +N+++   ++
Sbjct: 190 CEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VMV 247

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
           + + ++   GKAI  F   L  G+  D   + +++   SV   L LG Q+H + +K G +
Sbjct: 248 TSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL---SVLDCLNLGKQVHSYTLKSGLI 304

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
            D+ +G++L  +Y+K G L+ +  L      K  A + +++SGF E     E   + LFS
Sbjct: 305 LDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLRE--AIGLFS 362

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           +    G  PD  T + +L++ +S   L R + +H Y+++ G    + +G+AL+  Y+KCG
Sbjct: 363 EMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCG 422

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           S+  A +++  + + D VS ++++S Y+ HGL +   LLF +M   GF+ D  +I  +L+
Sbjct: 423 SLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILK 482

Query: 574 ACIYSGLSEGGICLFNEIEQI 594
           A + S  SE G  +   I +I
Sbjct: 483 AAVLSEESELGAQVHAYITKI 503



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 195/381 (51%), Gaps = 7/381 (1%)

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V +SLI  +  +  F +A  VFR     +V C N +I    +       F +F  + +  
Sbjct: 9   VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P+ YT+++V++ C     +  GK +    +K G   ++ V  +IV +Y K G   EA 
Sbjct: 69  QKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAEAR 127

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F  IS  +++SWT ++SGY +S     A+  F E    G+  +S  + +VI  C   S
Sbjct: 128 EVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPS 187

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK-SARMLLDGFSCKYTAEFNAIL 434
            +    Q+H +  K G+  D  +  AL+ + +K GD+  S R+  D    +     N ++
Sbjct: 188 MVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMV 247

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           + F +         + LF++    G+ PD  +   LLS+     CL  G+ +H+Y++K+G
Sbjct: 248 TSFSQN--KKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLKSG 302

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
              D+ VG++L TMY+KCGS++ ++ +F+ I  +D   W +M+S +  +G  + A+ LF 
Sbjct: 303 LILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFS 362

Query: 555 EMKREGFAPDDISILGVLQAC 575
           EM  EG +PD+ ++  VL  C
Sbjct: 363 EMLDEGTSPDESTLAAVLTVC 383



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K ++ S + +LG  VHA++ K G   +    ++L+ +Y+KF  ++   K F  +    
Sbjct: 480 ILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPD 539

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIF--G 178
            I WT+LI  Y   G     L + C M     K ++ T   +L ACS   L+E+  F   
Sbjct: 540 LIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLN 599

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
             +  + I+   EN  +V   ++     SG  REAEN
Sbjct: 600 SMVKDYGIEP--ENRHYV--CMVDALGRSGRLREAEN 632



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 16/167 (9%)

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL-L 552
           GY    +V ++LI  ++K    + A+++F+     ++  WN +++  AL     GA+  L
Sbjct: 2   GYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAG-ALRNQNYGAVFDL 60

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH-FAC--MVD 609
           F EM      PD  +   VL AC  + L E     F ++ Q   ++   E  F C  +VD
Sbjct: 61  FHEMCNGFQKPDSYTYSSVLAAC--ASLEE---LRFGKVVQARVIKCGAEDVFVCTSIVD 115

Query: 610 LLGRAGRLSEAMNLIN--SSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           L  + G ++EA  + +  S+P   S + W  ++S     +N  FS L
Sbjct: 116 LYAKCGHMAEAREVFSRISNP---SVVSWTVMLS-GYTKSNDAFSAL 158


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 207/629 (32%), Positives = 329/629 (52%), Gaps = 51/629 (8%)

Query: 153 SEEKFNEHTCSVILEACSLLED--RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
           S E F ++    +   C  LED  ++F             + N F   +++      G  
Sbjct: 51  SSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ---------QRNTFSWNAVLGALTKFGAL 101

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
            EA N+F+ +  +D    N M+  + +    E A    V + S DF  N+Y+F + +S C
Sbjct: 102 DEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSAC 161

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
              + +  G Q+HGL  K     ++ +G+A+V MY K  +   A+R FD +  RN++SW 
Sbjct: 162 AGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWN 221

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           +LI+ Y ++G  GKA+  F+  ++ GI  D   LA+V   C+  S +  GLQ+H   +KH
Sbjct: 222 SLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKH 281

Query: 391 G-YLSDVRLGTALVDIYAK-------------------------------GGDLKSARML 418
             Y +D+ LG ALVD+YAK                                  +K+AR++
Sbjct: 282 DKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLM 341

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                 +    +NA+++G+ +    + E+ + LF   +   + P   TF  LL+  A+ A
Sbjct: 342 FSNMMERNVVSWNALIAGYTQN--GENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLA 399

Query: 479 CLVRGRSLHAYSIKTGY------AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
            L  GR  H + +K G+       +D+ VGN+LI MY KCG ++    +F+ + +RD VS
Sbjct: 400 DLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVS 459

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           WNAM+  YA +G G  AL +F EM   G  PD ++++GVL AC ++GL E G C F  + 
Sbjct: 460 WNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMT 519

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
             +GL P+ +H+ CMVDLLGRAG L EA NLI + P     ++W +L++  K+  N    
Sbjct: 520 IEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLG 579

Query: 653 ILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
              ++RLL+++P ++G ++L+SNMYA  G   +  +VR  M  + + K+ GCSWI I S 
Sbjct: 580 KYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSH 639

Query: 713 LHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           LH F+   K HP  ++IY  L +L ++MK
Sbjct: 640 LHVFMVKDKRHPHKKDIYLILKILTEQMK 668



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 232/502 (46%), Gaps = 45/502 (8%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
            Q +TF  N ++    KF  LD A  LF  M  R   +W +++ G+     +E  L    
Sbjct: 81  QQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVV 140

Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG 208
           DM+  +   NE++    L AC+ L D   G QIH    KS +  +V++G++L+ MY    
Sbjct: 141 DMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCR 200

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
               A+  F  +  +++   N +I  Y + G +  A  VFV +++   EP++ T  +V S
Sbjct: 201 VVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVAS 260

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVR-EISVGNAIVTMYGKHGMSEEAERMFDAIS----- 322
            C     + EG Q+H   +K    R ++ +GNA+V MY K     EA  +FD +      
Sbjct: 261 ACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVV 320

Query: 323 --------------------------ERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
                                     ERN++SW ALI+GY ++G   +A+  FL      
Sbjct: 321 SETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL------SDVRLGTALVDIYAKGG 410
           I         +++ C+  ++L+LG Q H   +KHG+       SD+ +G +L+D+Y K G
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCG 440

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
            ++  R++ +    +    +NA++ G+ +     E   + +F +  ++G  PD VT   +
Sbjct: 441 LVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTE--ALEIFREMLVSGERPDHVTMIGV 498

Query: 471 LSLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DR 528
           LS  +    +  GR    + +I+ G          ++ +  + G +D A  + + +  + 
Sbjct: 499 LSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEP 558

Query: 529 DIVSWNAMLSAYALHG---LGK 547
           D V W ++L+A  +HG   LGK
Sbjct: 559 DAVVWGSLLAACKVHGNITLGK 580



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 229/554 (41%), Gaps = 100/554 (18%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G  DL +G  +H  + KS    D +  + L+++Y+K   +  AQ+ FD M VR+ ++W S
Sbjct: 163 GLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNS 222

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-S 188
           LI  Y  +G     L +   M     + +E T + +  AC+ L     G QIHA  +K  
Sbjct: 223 LITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHD 282

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV----------------------- 225
            + N++ +G +L+ MY       EA  VF  +  +DV                       
Sbjct: 283 KYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMF 342

Query: 226 -----RCV---NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
                R V   N +I  Y + GE+E A  +F+ L      P  YTF N+++ C     ++
Sbjct: 343 SNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLK 402

Query: 278 EGKQL------HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
            G+Q       HG   K G   +I VGN+++ MY K G+ E+   +F+ + ER+ +SW A
Sbjct: 403 LGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNA 462

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG-LQLHGFAIKH 390
           +I GY ++G+G +A+  F E L  G   D   +  V+  CS    +E G        I+H
Sbjct: 463 MIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEH 522

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G +      T +VD+  + G L  A  L+                               
Sbjct: 523 GLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMP--------------------------- 555

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR-SLHAYSIKTGYAADVIVGNALI--- 506
                    MEPD V +  LL+     AC V G  +L  Y  +     D +     +   
Sbjct: 556 ---------MEPDAVVWGSLLA-----ACKVHGNITLGKYVAERLLEIDPLNSGPYVLLS 601

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIV-----SWNAMLSAYAL-------HGLGKGALLLF- 553
            MYA+ G      ++ K +    ++     SW ++ S   +       H   K   L+  
Sbjct: 602 NMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILK 661

Query: 554 ---EEMKREGFAPD 564
              E+MKR G+ P+
Sbjct: 662 ILTEQMKRVGYVPE 675



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 175/397 (44%), Gaps = 66/397 (16%)

Query: 243 MAFHVFVHLLSSDFEPNDYT-FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           MA H  V  +  D    D + F  ++  C ++  V E + +H   +K     EI + N +
Sbjct: 1   MAKHGLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRL 60

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC-- 359
           V +YGK G  E+A ++FD + +RN  SW A++    + G   +A+N F    +   C   
Sbjct: 61  VDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWN 120

Query: 360 -----------------------------DSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
                                        +     + +  C+   +L +G+Q+HG   K 
Sbjct: 121 AMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS 180

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
            Y  DV +G+ALVD+Y+K   + SA+   D    +    +N++++ + +         + 
Sbjct: 181 RYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQN--GPAGKALE 238

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK-TGYAADVIVGNALITMY 509
           +F +    G+EPD +T + + S  AS + +  G  +HA  +K   Y  D+++GNAL+ MY
Sbjct: 239 VFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMY 298

Query: 510 AKC-------------------------------GSIDGAFQIFKGISDRDIVSWNAMLS 538
           AKC                                S+  A  +F  + +R++VSWNA+++
Sbjct: 299 AKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIA 358

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            Y  +G  + A+ LF  +KRE   P   +   +L AC
Sbjct: 359 GYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNAC 395



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 19/176 (10%)

Query: 61  WP------QLVKISIGSGDLKLGQAVHA------FLLKSGSQNDTFEANNLINLYAKFNR 108
           WP       L+       DLKLG+  H       F  KSG  +D F  N+LI++Y K   
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGL 441

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           ++  + +F+ ML R  ++W ++I GY  +G     L I  +M  S E+ +  T   +L A
Sbjct: 442 VEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSA 501

Query: 169 CS----LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           CS    + E R +     +  I+ G        T ++ +   +GC  EA N+ + +
Sbjct: 502 CSHAGLVEEGRCY---FQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTM 554


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 202/673 (30%), Positives = 362/673 (53%), Gaps = 6/673 (0%)

Query: 72   GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
             +L LG  VHA  +K G  ++ +  ++L+++Y+K  +++ A K+F+ +  ++ + W ++I
Sbjct: 341  ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400

Query: 132  KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            +GY  +G+   V+ +  DM  S    ++ T + +L  C+   D   G Q H+  IK    
Sbjct: 401  RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460

Query: 192  NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             N+FVG +L+ MY   G   +A  +F  +  +D    N +I  Y +      AF +F  +
Sbjct: 461  KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520

Query: 252  LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                   +     + +  C    G+ +GKQ+H L+VK G+ R++  G++++ MY K G+ 
Sbjct: 521  NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580

Query: 312  EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            ++A ++F ++ E +++S  ALI+GY ++ +  +A+  F E L  G+       AT+++ C
Sbjct: 581  KDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639

Query: 372  SVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSC-KYTAE 429
                +L LG Q HG   K G+ S+   LG +L+ +Y     +  A  L    S  K    
Sbjct: 640  HKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVL 699

Query: 430  FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
            +  ++SG  +      E+ +  + + R  G+ PD  TF  +L + +  + L  GR++H+ 
Sbjct: 700  WTGMMSGHSQN--GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSL 757

Query: 490  SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKG 548
                 +  D +  N LI MYAKCG + G+ Q+F  +  R ++VSWN++++ YA +G  + 
Sbjct: 758  IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAED 817

Query: 549  ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
            AL +F+ M++    PD+I+ LGVL AC ++G    G  +F  +   YG+   ++H ACMV
Sbjct: 818  ALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMV 877

Query: 609  DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
            DLLGR G L EA + I +        LW +L+   ++  +     +++++L++LEP+++ 
Sbjct: 878  DLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSS 937

Query: 669  SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            +++L+SN+YA QG  ++A  +R  M D  + K  G SWI+++ + H F A  K H E  +
Sbjct: 938  AYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGK 997

Query: 729  IYSKLDLLNDEMK 741
            I   L+ L D MK
Sbjct: 998  IEMFLEDLYDLMK 1010



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 261/521 (50%), Gaps = 11/521 (2%)

Query: 71  SGDLKLGQAVHAFLL-----KSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
           SG +K G    A L+       G + D      +IN Y +  +L  A+ LF  M     +
Sbjct: 234 SGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVV 293

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
            W  +I G+   G     +    +M +S  K    T   +L A  ++ +   G  +HA A
Sbjct: 294 AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA 353

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           IK G  +N++VG+SL+SMY        A  VF  L  K+    N MI  Y   GES    
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +F+ + SS +  +D+TFT+++S C  +  +E G Q H + +K  + + + VGNA+V MY
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G  E+A ++F+ + +R+ ++W  +I  YV+  +  +A + F      GI  D +CLA
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA 533

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           + +  C+    L  G Q+H  ++K G   D+  G++L+D+Y+K G +K AR +       
Sbjct: 534 STLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
                NA+++G+ +   ++ E+ +VLF +    G+ P  +TF+ ++        L  G  
Sbjct: 594 SVVSMNALIAGYSQ---NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650

Query: 486 LHAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALH 543
            H    K G++++   +G +L+ MY     +  A  +F  +S  + IV W  M+S ++ +
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEG 583
           G  + AL  ++EM+ +G  PD  + + VL+ C + S L EG
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 269/579 (46%), Gaps = 58/579 (10%)

Query: 57  LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           +F++ PQ + ++     L++G+AVH+  L  G  ++    N +++LYAK  ++  A+K F
Sbjct: 64  VFDEMPQRLALA-----LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF 118

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           D  L +    W S++  Y   G    VL     ++ ++   N+ T S++L  C+   +  
Sbjct: 119 D-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVE 177

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           FG QIH   IK G E N + G +L+ MY       +A  VF  +   +  C   +   Y 
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYV 237

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           KAG  E A  VF  +      P+   F  VI+                            
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT--------------------------- 270

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
                   Y + G  ++A  +F  +S  ++++W  +ISG+ + G    AI  F       
Sbjct: 271 --------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSS 322

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +    S L +V+    + +NL+LGL +H  AIK G  S++ +G++LV +Y+K   +++A 
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            + +    K    +NA++ G+      +   VM LF   + +G   D  TF+ LLS  A+
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHN--GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L  G   H+  IK   A ++ VGNAL+ MYAKCG+++ A QIF+ + DRD V+WN +
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEGGICLFNEIEQIY 595
           + +Y        A  LF+ M   G   D   +   L+AC +  GL +G        +Q++
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG--------KQVH 552

Query: 596 ------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
                 GL   L   + ++D+  + G + +A  + +S P
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 221/493 (44%), Gaps = 47/493 (9%)

Query: 148 CDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
           C +++S + F+E    + L        RI G+ +H+ ++  G ++   +G +++ +Y   
Sbjct: 56  CKLFKSRKVFDEMPQRLALAL------RI-GKAVHSKSLILGIDSEGRLGNAIVDLYAKC 108

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
                AE  F  L  KDV   N M+  Y+  G+       FV L  +   PN +TF+ V+
Sbjct: 109 AQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVL 167

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
           S C     VE G+Q+H   +K G+ R    G A+V MY K     +A R+F+ I + N +
Sbjct: 168 STCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTV 227

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
            WT L SGYV++G   +A+  F    D G   D     TVI                   
Sbjct: 228 CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI------------------- 268

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
                           + Y + G LK AR+L    S      +N ++SG  ++    E  
Sbjct: 269 ----------------NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC--ETV 310

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
            +  F   R + ++    T   +LS     A L  G  +HA +IK G A+++ VG++L++
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY+KC  ++ A ++F+ + +++ V WNAM+  YA +G     + LF +MK  G+  DD +
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
              +L  C  S   E G   F+ I     L   L     +VD+  + G L +A  +    
Sbjct: 431 FTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489

Query: 628 PFSESPLLWRTLV 640
                 + W T++
Sbjct: 490 C-DRDNVTWNTII 501


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 212/699 (30%), Positives = 366/699 (52%), Gaps = 10/699 (1%)

Query: 33  SPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQND 92
           S N K+ V  L          RTL       ++++   S  LK G+ V  F+  +G   D
Sbjct: 74  SGNLKNAVKLLHVSGKWDIDPRTLC-----SVLQLCADSKSLKDGKEVDNFIRGNGFVLD 128

Query: 93  TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
           +   + L  +Y     L  A ++FD + +  A+ W  L+      GD+   +G+   M  
Sbjct: 129 SNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
           S  + + +T S + ++ S L     GEQ+H + +KSGF     VG SL++ Y  +     
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDS 248

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF  +  +DV   N +I  Y   G +E    VFV +L S  E +  T  +V + C +
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCAD 308

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
           +  +  G+ +H   VK    RE    N ++ MY K G  + A+ +F  +S R+++S+T++
Sbjct: 309 SRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSM 368

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           I+GY R G  G+A+  F E  + GI  D   +  V++ C+    L+ G ++H +  ++  
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDM 428

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM--V 450
             D+ +  AL+D+YAK G ++ A ++      K    +N ++ G+ +    +E   +  +
Sbjct: 429 GFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNL 488

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           L  ++R +   PD  T + +L   AS +   +GR +H Y ++ GY +D  V N+L+ MYA
Sbjct: 489 LLVEKRFS---PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG++  A  +F  I+ +D+VSW  M++ Y +HG GK A+ LF +M++ G  PD+IS + 
Sbjct: 546 KCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVS 605

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           +L AC +SGL + G   FN +     + P +EH+AC+VD+L R G LS+A   I + P  
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIP 665

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
               +W  L+   ++  + K +   ++++ +LEP++ G ++L++N+YA     +E  ++R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLR 725

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
             +    L K  GCSWIEI  +++ FVA    +PE+E+I
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKI 764


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 206/646 (31%), Positives = 337/646 (52%), Gaps = 71/646 (10%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L++C   +  I   +IHA  IK+ F + +F+   L+  Y   G F +A  VF  +  ++
Sbjct: 25  LLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRN 84

Query: 225 VRCVNFMILEYNKAGESEMAFHVF-------------------------------VHLLS 253
               N ++    K G+ + AF+VF                               V + S
Sbjct: 85  TFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHS 144

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            DF  N+Y+F + +S C     +  G Q+H L  K   + ++ +G+A+V MY K G+   
Sbjct: 145 EDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVAC 204

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+R FD ++ RN++SW +LI+ Y ++G  GKA+  F+  +D G+  D   LA+V+  C+ 
Sbjct: 205 AQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACAS 264

Query: 374 CSNLELGLQLHGFAIKHG-YLSDVRLGTALVDIYAK------------------------ 408
            S +  GLQ+H   +K   Y +D+ LG ALVD+YAK                        
Sbjct: 265 WSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETS 324

Query: 409 -------GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
                     +K+AR++      K    +NA+++G+ +    + E+ + LF   +   + 
Sbjct: 325 MVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQN--GENEEAVRLFLLLKRESIW 382

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY------AADVIVGNALITMYAKCGSI 515
           P   TF  LL+  A+ A L  GR  H   +K G+       +D+ VGN+LI MY KCG +
Sbjct: 383 PTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMV 442

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +    +F+ + +RD+VSWNAM+  YA +G G  AL +F +M   G  PD ++++GVL AC
Sbjct: 443 EDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSAC 502

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            ++GL E G   F+ +    GL P+ +HF CMVDLLGRAG L EA +LI + P     ++
Sbjct: 503 SHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVV 562

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W +L++  K+  N +     +++L++++P ++G ++L+SNMYA  G   +  +VR  M  
Sbjct: 563 WGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQ 622

Query: 696 LRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             + K+ GCSWIEI S++H F+   K HP  ++I+  L  L ++MK
Sbjct: 623 RGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMK 668



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 238/501 (47%), Gaps = 45/501 (8%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           Q +TF  N ++++  KF +LD A  +F  M      +W +++ G+     +E  L    D
Sbjct: 82  QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M+  +   NE++    L AC+ L D   G QIHA   KS +  +V++G++L+ MY   G 
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
              A+  F G+A +++   N +I  Y + G +  A  VFV ++ +  EP++ T  +V+S 
Sbjct: 202 VACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSA 261

Query: 270 CYENLGVEEGKQLHGLAVKFGVVR-EISVGNAIVTMYGKHGMSEEAERMFDAIS------ 322
           C     + EG Q+H   VK    R ++ +GNA+V MY K     EA  +FD +       
Sbjct: 262 CASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVS 321

Query: 323 -------------------------ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
                                    E+N++SW ALI+GY ++G   +A+  FL      I
Sbjct: 322 ETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL------SDVRLGTALVDIYAKGGD 411
                    +++ C+  ++L+LG Q H   +KHG+       SD+ +G +L+D+Y K G 
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGM 441

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           ++   ++ +    +    +NA++ G+ +       + + +F +  ++G +PD VT   +L
Sbjct: 442 VEDGCLVFERMVERDVVSWNAMIVGYAQNGYG--TNALEIFRKMLVSGQKPDHVTMIGVL 499

Query: 472 SLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRD 529
           S  +    +  GR   H+   + G A        ++ +  + G +D A  + + +    D
Sbjct: 500 SACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPD 559

Query: 530 IVSWNAMLSAYALHG---LGK 547
            V W ++L+A  +HG   LGK
Sbjct: 560 NVVWGSLLAACKVHGNIELGK 580



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 229/554 (41%), Gaps = 100/554 (18%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G  DL +G  +HA + KS    D +  + L+++Y+K   +  AQ+ FDGM VR+ ++W S
Sbjct: 163 GLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNS 222

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-S 188
           LI  Y  +G     L +   M  +  + +E T + ++ AC+       G QIHA  +K  
Sbjct: 223 LITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRD 282

Query: 189 GFENNVFVGTSLISM-------------------------------YFHSGCFREAENVF 217
            + N++ +G +L+ M                               Y  +   + A  +F
Sbjct: 283 KYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMF 342

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +  K+V   N +I  Y + GE+E A  +F+ L      P  YTF N+++ C     ++
Sbjct: 343 SNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLK 402

Query: 278 EGKQL------HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
            G+Q       HG   + G   +I VGN+++ MY K GM E+   +F+ + ER+++SW A
Sbjct: 403 LGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNA 462

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKH 390
           +I GY ++G+G  A+  F + L  G   D   +  V+  CS    +E G +  H    + 
Sbjct: 463 MIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTEL 522

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G        T +VD+  + G L  A  L+                               
Sbjct: 523 GLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMP--------------------------- 555

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR-SLHAYSIKTGYAADVIVGNALI--- 506
                    M+PD V +  LL+     AC V G   L  Y  +     D +     +   
Sbjct: 556 ---------MQPDNVVWGSLLA-----ACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLS 601

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIV-----SWNAMLSAYAL-------HGLGKGALL--- 551
            MYA+ G      ++ K +  R ++     SW  + S   +       H L K   L   
Sbjct: 602 NMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLK 661

Query: 552 -LFEEMKREGFAPD 564
            L E+MK  G+ P+
Sbjct: 662 FLTEQMKWAGYVPE 675



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 179/398 (44%), Gaps = 68/398 (17%)

Query: 243 MAFHVFVHLLSSDFEPNDYT-FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           M  H FV  L  +    D + F  ++  C  +    + +++H   +K     EI + N +
Sbjct: 1   MGRHGFVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRL 60

Query: 302 VTMYGKHGMSEEAERMFDAISERNLI-------------------------------SWT 330
           V  YGK G  E+A ++FD + +RN                                 SW 
Sbjct: 61  VDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWN 120

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           A++SG+ +     +A+  F++        +     + +  C+  ++L +G+Q+H    K 
Sbjct: 121 AMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS 180

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK-IADDEEDVM 449
            YL DV +G+ALVD+Y+K G +  A+   DG + +    +N++++ + +   A    +V 
Sbjct: 181 RYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVF 240

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAADVIVGNALITM 508
           V+       G+EPD +T + ++S  AS + +  G  +HA  +K   Y  D+++GNAL+ M
Sbjct: 241 VMMMDN---GVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDM 297

Query: 509 YAKC-------------------------------GSIDGAFQIFKGISDRDIVSWNAML 537
           YAKC                                S+  A  +F  + ++++VSWNA++
Sbjct: 298 YAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALI 357

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           + Y  +G  + A+ LF  +KRE   P   +   +L AC
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNAC 395


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 209/668 (31%), Positives = 358/668 (53%), Gaps = 3/668 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT-WTSLIKGYL 135
           G+ +H +++++  + D +    LI +Y+  +R   A  LF  +  RS I  W  +I G++
Sbjct: 161 GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFV 220

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           ++G +E  L +         K    + +    ACS  E   FG Q+H   IK  F+++ +
Sbjct: 221 ENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPY 280

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V TSL++MY  SG   +A+ VF  +  K+V   N MI  +   G +  A  ++  + + +
Sbjct: 281 VCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGE 340

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
              + +T ++++S C      + G+ +H   +K  +   +++ +A++TMY K G +E+A+
Sbjct: 341 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 400

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F  + ER++++W ++I+G+ ++     A++ F      G+  DS  + +VI       
Sbjct: 401 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 460

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           N+ELG  +HGFAIK G  SDV +  +LVD+Y+K G  +SA M+      K    +N+++S
Sbjct: 461 NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 520

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
            +        E  + L  Q    G   D V+ + +L   +S A L++G++LHAY I+   
Sbjct: 521 CY--SWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQI 578

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +D+ V NALI MY KCG +  A  IF+ +  R++V+WN+M++ Y  HG  + A+ LF+E
Sbjct: 579 PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKE 638

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           MKR   APD+++ L ++ +C +SG+ E G+ LF  +   YG+ P +EH+A +VDLLGRAG
Sbjct: 639 MKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAG 698

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           RL +A + I   P      +W  L+   +   N +   L +  LL +EP    +++ + N
Sbjct: 699 RLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLN 758

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +Y    M D AA +R +M    L K  GCSWIE+ +++  F +         EIY  L  
Sbjct: 759 LYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSS 818

Query: 736 LNDEMKLK 743
           L   M+ K
Sbjct: 819 LKSNMEGK 826



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 236/472 (50%), Gaps = 4/472 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ VH  ++K   Q+D +   +L+ +YAK   ++ A+K+FD +L +      ++I  
Sbjct: 260 LDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISA 319

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           ++ +G     LG+   M   E   +  T S +L  CS++    FG  +HA  IK   ++N
Sbjct: 320 FIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN 379

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V + ++L++MY+  G   +A++VF  +  +DV     MI  + +    + A  +F  +  
Sbjct: 380 VAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEK 439

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              + +    T+VIS       VE G  +HG A+K G+  ++ V  ++V MY K G +E 
Sbjct: 440 EGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAES 499

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           AE +F ++  +NL++W ++IS Y  +G    +IN   + L  G   DS  + TV+   S 
Sbjct: 500 AEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSS 559

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + L  G  LH + I+    SD+++  AL+D+Y K G LK A+++ +    +    +N++
Sbjct: 560 VAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSM 619

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-HAYSIK 492
           ++G+      + E+ + LF + + +   PD VTF  L++  +    +  G +L     I+
Sbjct: 620 IAGYGSH--GNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIE 677

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            G    +    +++ +  + G +D A+   +G+  D D   W  +L A   H
Sbjct: 678 YGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAH 729



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 253/522 (48%), Gaps = 31/522 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM- 119
           +P L+K      +L  G+ +HA ++  G Q+D + A +LIN+Y K   L  A ++FD M 
Sbjct: 58  FPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMS 117

Query: 120 ----LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
                      W  +I GY   G +E  L   C M                     L   
Sbjct: 118 ESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQE-------------------LSWY 158

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR--EAENVFRGLAYK-DVRCVNFMI 232
           + G QIH + I++ FE + ++ T+LI MY  S C R  EA ++F  L  + ++   N MI
Sbjct: 159 MAGRQIHGYIIRNMFEGDPYLETALIGMY--SSCSRPMEAWSLFGKLENRSNIVAWNVMI 216

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             + + G  E +  ++    + + +    +FT   + C     ++ G+Q+H   +K    
Sbjct: 217 GGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQ 276

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            +  V  +++TMY K G  E+A+++FD + ++ +    A+IS ++ +G    A+  + + 
Sbjct: 277 DDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM 336

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
                  DS  +++++ GCSV  + + G  +H   IK    S+V + +AL+ +Y K G  
Sbjct: 337 KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGST 396

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           + A  +      +    + ++++GF +      +D + LF      G++ D    + ++S
Sbjct: 397 EDADSVFYTMKERDVVAWGSMIAGFCQN--RRFKDALDLFRAMEKEGVKADSDVMTSVIS 454

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
                  +  G  +H ++IK G  +DV V  +L+ MY+K G  + A  +F  + ++++V+
Sbjct: 455 AGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVA 514

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           WN+M+S Y+ +GL + ++ L  ++ + GF  D +SI  VL A
Sbjct: 515 WNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVA 556



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 246/546 (45%), Gaps = 38/546 (6%)

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
           FN+  +++K +       + +  S IK  +  G Y   L +      S     + T   +
Sbjct: 3   FNQF-ISRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSL 61

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL----- 220
           L+ C+ L +   G  IHA  +  G +++ ++ TSLI+MY   G    A  VF  +     
Sbjct: 62  LKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRD 121

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
           +  D+   N +I  Y K G  E     F  +    +                      G+
Sbjct: 122 SAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELSW-------------------YMAGR 162

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER-NLISWTALISGYVRS 339
           Q+HG  ++     +  +  A++ MY       EA  +F  +  R N+++W  +I G+V +
Sbjct: 163 QIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 222

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G   K++  +    +      S+        CS    L+ G Q+H   IK  +  D  + 
Sbjct: 223 GMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVC 282

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           T+L+ +YAK G ++ A+ + D    K     NA++S F+        D + L+++ +   
Sbjct: 283 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGN--GRAYDALGLYNKMKAGE 340

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
              D  T S LLS  +       GR++HA  IK    ++V + +AL+TMY KCGS + A 
Sbjct: 341 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 400

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
            +F  + +RD+V+W +M++ +  +   K AL LF  M++EG   D      V+ + I +G
Sbjct: 401 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADS----DVMTSVISAG 456

Query: 580 LSEGGICLFNEIEQIYGLRPILEH---FAC-MVDLLGRAGRLSEAMNLINSSPFSESPLL 635
           L    + L + I   + ++  LE     AC +VD+  + G  +E+  ++ SS  +++ + 
Sbjct: 457 LGLENVELGHLIHG-FAIKRGLESDVFVACSLVDMYSKFG-FAESAEMVFSSMPNKNLVA 514

Query: 636 WRTLVS 641
           W +++S
Sbjct: 515 WNSMIS 520



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 166/351 (47%), Gaps = 1/351 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G    G+ VHA ++K   Q++    + L+ +Y K    + A  +F  M  R  + W S+I
Sbjct: 359 GSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMI 418

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+  +  ++  L +   M +   K +    + ++ A   LE+   G  IH FAIK G E
Sbjct: 419 AGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLE 478

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++VFV  SL+ MY   G    AE VF  +  K++   N MI  Y+  G  EM+ ++   +
Sbjct: 479 SDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQI 538

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           L   F  +  + T V+        + +GK LH   ++  +  ++ V NA++ MY K G  
Sbjct: 539 LQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCL 598

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           + A+ +F+ +  RNL++W ++I+GY   G+  +A+  F E        D      +I  C
Sbjct: 599 KYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSC 658

Query: 372 SVCSNLELGLQLHGFA-IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           S    +E GL L     I++G    +    ++VD+  + G L  A   + G
Sbjct: 659 SHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRG 709



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 131/252 (51%), Gaps = 1/252 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++   +G  +++LG  +H F +K G ++D F A +L+++Y+KF   + A+ +F  M  ++
Sbjct: 452 VISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKN 511

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W S+I  Y  +G  E  + +   + +     +  + + +L A S +   + G+ +HA
Sbjct: 512 LVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHA 571

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           + I+    +++ V  +LI MY   GC + A+ +F  +  +++   N MI  Y   G  E 
Sbjct: 572 YQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEE 631

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA-VKFGVVREISVGNAIV 302
           A  +F  +  S+  P++ TF  +I+ C  +  VEEG  L  L  +++GV   +    ++V
Sbjct: 632 AVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVV 691

Query: 303 TMYGKHGMSEEA 314
            + G+ G  ++A
Sbjct: 692 DLLGRAGRLDDA 703


>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 210/667 (31%), Positives = 347/667 (52%), Gaps = 5/667 (0%)

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           A H   +K GS  D + ANNLI  YAK   L+ A ++FD M  R  ++W ++I  +   G
Sbjct: 14  ATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSG 73

Query: 139 DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
           D ++   +   M RS   F+  T   IL+  + +     G+Q+H+  +K G   NVF G+
Sbjct: 74  DLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGS 133

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +L+ MY   G   +   VF+ +  ++    N ++  Y++ G+ +MAF V   +     E 
Sbjct: 134 ALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEI 193

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +D T + ++++    +  +   QLH   VK G+    +V NA +T Y +    ++AER+F
Sbjct: 194 DDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVF 253

Query: 319 D-AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           D A+  R+L++W +++  Y+       A   FL+  + G   D+     ++  CSV  + 
Sbjct: 254 DGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHK 313

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD--LKSARMLLDGFSCKYTAEFNAILS 435
             G  LHG  IK G  + V +  AL+ +Y +  D  ++ A  +      K    +N+IL+
Sbjct: 314 TCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILA 373

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+++      ED + LF Q R   +E D  TFS ++   +  A L  G+  H  ++K G+
Sbjct: 374 GYVQ--VGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGF 431

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +  VG++LI MY+KCG I+ A + F+  S  + + WN+++  YA HG G  AL LF  
Sbjct: 432 DTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYM 491

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           MK      D I+ + VL AC ++GL E G      +E  +G+ P  EH+AC +DL GRAG
Sbjct: 492 MKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAG 551

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
            L +A  L+ + PF    ++ +TL+   +   + + +   +K LL+LEP++  +++++S 
Sbjct: 552 HLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVILSE 611

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           MY    M  E A V   M +  + K  G SWIE+ + +H F A    HP+ EEIY  L  
Sbjct: 612 MYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVKNNVHAFNAEDHSHPQCEEIYILLQQ 671

Query: 736 LNDEMKL 742
           LN+ +KL
Sbjct: 672 LNEGIKL 678



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 213/411 (51%), Gaps = 19/411 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G LKLGQ +H+ +LK G   + F  + L+++YAK  R+D    +F  M  R+ ++W +L+
Sbjct: 108 GKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLV 167

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE---QIHAFAIKS 188
             Y   GD +    +   M     + ++ T S +L   +LL++ +F +   Q+H   +K 
Sbjct: 168 ASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLL---TLLDNAMFYKLTMQLHCKIVKH 224

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFHV 247
           G E    V  + I+ Y      ++AE VF G    +D+   N M+  Y    + ++AF V
Sbjct: 225 GLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKV 284

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F+ + +  FEP+ YT+T ++  C        GK LHGL +K G+   + V NA+++MY +
Sbjct: 285 FLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIR 344

Query: 308 HG--MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
                 E+A R+F ++  ++  +W ++++GYV+ G    A+  FL+   L I  D    +
Sbjct: 345 FNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFS 404

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            VI  CS  + L+LG Q H  A+K G+ ++  +G++L+ +Y+K G ++ AR   +  S  
Sbjct: 405 AVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKD 464

Query: 426 YTAEFNAILSGFME----KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
               +N+I+ G+ +     IA D      LF   +   ++ D +TF  +L+
Sbjct: 465 NAIVWNSIIFGYAQHGQGNIALD------LFYMMKERKVKLDHITFVAVLT 509


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 203/674 (30%), Positives = 350/674 (51%), Gaps = 15/674 (2%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           + SG L   +A    +       + F  N +++ Y+    L  AQ LF     R+A TWT
Sbjct: 54  LSSGHLHRARA----MFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWT 109

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE--ACSLLEDRIFGEQIHAFAI 186
            +++ +   G     L +   M       +  T + +L    C++         +H FAI
Sbjct: 110 IMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAI 162

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G + +VFV  +L+  Y   G    A  VF  +  KD    N M++  +K G    A  
Sbjct: 163 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 222

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F  +  +      +TF+++++V      +  G Q+H L ++   V  + V N+++  Y 
Sbjct: 223 LFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K    ++  R+FD + ER+ +S+  +I+ Y  +      +  F E   LG        AT
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++       ++ +G Q+H   +  G  S+  LG AL+D+Y+K G L +A+      S K 
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 402

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              + A+++G+++      E+ + LFS  R AG+ PD  TFS ++  S+S A +  GR L
Sbjct: 403 AISWTALITGYVQN--GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H+Y I++GY + V  G+ L+ MYAKCG +D A + F  + +R+ +SWNA++SAYA +G  
Sbjct: 461 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 520

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           K A+ +FE M   GF PD ++ L VL AC ++GL++  +  F+ ++  Y + P  EH+AC
Sbjct: 521 KNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC 580

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           ++D LGR G  S+   ++   PF   P++W +++   ++  N + + +A+ +L  +EP D
Sbjct: 581 VIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTD 640

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
           A  ++++SN+YA  G  ++AA V+  M D  + KE+G SW+EI  K++ F ++    P  
Sbjct: 641 ATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMI 700

Query: 727 EEIYSKLDLLNDEM 740
           +EI  +LD L  EM
Sbjct: 701 DEIKDELDRLYKEM 714



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 147/309 (47%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ ++ G   L LG  VHA +L+S S  + F  N+L++ Y+K + LD  ++LFD M  R 
Sbjct: 242 ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERD 301

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++  +I  Y  +    +VL +  +M +          + +L     L D   G+QIHA
Sbjct: 302 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 361

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +  G  +   +G +LI MY   G    A++ F   + K       +I  Y + G+ E 
Sbjct: 362 QLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEE 421

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +  +   P+  TF+++I        +  G+QLH   ++ G    +  G+ +V 
Sbjct: 422 ALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVD 481

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  +EA R FD + ERN ISW A+IS Y   G    AI  F   L  G   DS  
Sbjct: 482 MYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVT 541

Query: 364 LATVIDGCS 372
             +V+  CS
Sbjct: 542 FLSVLAACS 550



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 12/221 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K S     + LG+ +H++L++SG ++  F  + L+++YAK   LD A + FD M  R+
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 503

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL--LED---RIFG 178
           +I+W ++I  Y   G+ ++ + +   M       +  T   +L ACS   L D   + F 
Sbjct: 504 SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFH 563

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
              H ++I    E+   V  +L  +    GCF + + +   + +K    +   IL   + 
Sbjct: 564 LMKHQYSISPWKEHYACVIDTLGRV----GCFSQVQKMLVEMPFKADPIIWTSILHSCRI 619

Query: 239 -GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            G  E+A      L     EP D T   ++S  Y   G  E
Sbjct: 620 HGNQELARVAADKLFG--MEPTDATPYVILSNIYARAGQWE 658


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 203/674 (30%), Positives = 350/674 (51%), Gaps = 15/674 (2%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           + SG L   +A    +       + F  N +++ Y+    L  AQ LF     R+A TWT
Sbjct: 54  LSSGHLHRARA----MFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWT 109

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE--ACSLLEDRIFGEQIHAFAI 186
            +++ +   G     L +   M       +  T + +L    C++         +H FAI
Sbjct: 110 IMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAI 162

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G + +VFV  +L+  Y   G    A  VF  +  KD    N M++  +K G    A  
Sbjct: 163 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 222

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F  +  +      +TF+++++V      +  G Q+H L ++   V  + V N+++  Y 
Sbjct: 223 LFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K    ++  R+FD + ER+ +S+  +I+ Y  +      +  F E   LG        AT
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++       ++ +G Q+H   +  G  S+  LG AL+D+Y+K G L +A+      S K 
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 402

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              + A+++G+++      E+ + LFS  R AG+ PD  TFS ++  S+S A +  GR L
Sbjct: 403 AISWTALITGYVQN--GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H+Y I++GY + V  G+ L+ MYAKCG +D A + F  + +R+ +SWNA++SAYA +G  
Sbjct: 461 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 520

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           K A+ +FE M   GF PD ++ L VL AC ++GL++  +  F+ ++  Y + P  EH+AC
Sbjct: 521 KNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC 580

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           ++D LGR G  S+   ++   PF   P++W +++   ++  N + + +A+ +L  +EP D
Sbjct: 581 VIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTD 640

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
           A  ++++SN+YA  G  ++AA V+  M D  + KE+G SW+EI  K++ F ++    P  
Sbjct: 641 ATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMI 700

Query: 727 EEIYSKLDLLNDEM 740
           +EI  +LD L  EM
Sbjct: 701 DEIKDELDRLYKEM 714



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 147/309 (47%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ ++ G   L LG  VHA +L+S S  + F  N+L++ Y+K + LD  ++LFD M  R 
Sbjct: 242 ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERD 301

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++  +I  Y  +    +VL +  +M +          + +L     L D   G+QIHA
Sbjct: 302 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 361

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +  G  +   +G +LI MY   G    A++ F   + K       +I  Y + G+ E 
Sbjct: 362 QLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEE 421

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +  +   P+  TF+++I        +  G+QLH   ++ G    +  G+ +V 
Sbjct: 422 ALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVD 481

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  +EA R FD + ERN ISW A+IS Y   G    AI  F   L  G   DS  
Sbjct: 482 MYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVT 541

Query: 364 LATVIDGCS 372
             +V+  CS
Sbjct: 542 FLSVLAACS 550



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 12/221 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K S     + LG+ +H++L++SG ++  F  + L+++YAK   LD A + FD M  R+
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 503

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL--LED---RIFG 178
           +I+W ++I  Y   G+ ++ + +   M       +  T   +L ACS   L D   + F 
Sbjct: 504 SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFH 563

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
              H ++I    E+   V  +L  +    GCF + + +   + +K    +   IL   + 
Sbjct: 564 LMKHQYSISPWKEHYACVIDTLGRV----GCFSQVQKMLVEMPFKADPIIWTSILHSCRI 619

Query: 239 -GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            G  E+A      L     EP D T   ++S  Y   G  E
Sbjct: 620 HGNQELARVAADKLFG--MEPTDATPYVILSNIYARAGQWE 658


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 205/710 (28%), Positives = 381/710 (53%), Gaps = 31/710 (4%)

Query: 61   WPQLVKISIGSGDLKLGQAVHAFLLKSG--SQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
            +P ++K +    DL LG+ +HA + K G    +    AN+L+N+Y K   L  A+++FD 
Sbjct: 333  FPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDD 392

Query: 119  MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI-F 177
            +  R  ++W S+I       ++E  L +   M          T   +  ACS +   +  
Sbjct: 393  IPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRL 452

Query: 178  GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
            G+Q+HA+ +++G +   +   +L++MY   G   +A+ +F     KD+   N +I   ++
Sbjct: 453  GKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQ 511

Query: 238  AGESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
                E A  ++V+L+  D   P+  T  +V+  C +   +  G+++H  A++ G + E S
Sbjct: 512  NDRFEEAL-MYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENS 570

Query: 297  -VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-D 354
             VG A+V MY      ++   +FD +  R +  W AL++GY R+    +A+  F+E + +
Sbjct: 571  FVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISE 630

Query: 355  LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
               C +++  A+V+  C  C        +HG+ +K G+  D  +  AL+D+Y++ G ++ 
Sbjct: 631  SEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEI 690

Query: 415  ARMLLDGFSCKYTAEFNAILSG----------------FMEKIADDEEDVMVLFSQQRLA 458
            ++ +    + +    +N +++G                   +  +D  D  V +      
Sbjct: 691  SKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGV 750

Query: 459  GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
              +P+ VT   +L   A+ A L +G+ +HAY++K   A DV VG+AL+ MYAKCG ++ A
Sbjct: 751  PFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLA 810

Query: 519  FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM------KREGFAPDDISILGVL 572
             ++F  +  R++++WN ++ AY +HG G+ AL LF  M       RE   P++++ + + 
Sbjct: 811  SRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIF 870

Query: 573  QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
             AC +SG+ + G+ LF+ ++  +G+ P  +H+AC+VDLLGR+GR+ EA  LIN+ P + +
Sbjct: 871  AACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLN 930

Query: 633  PL-LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
             +  W +L+   ++  + +F  +A+K L  LEP  A  ++L+SN+Y+  G+ D+A  VR 
Sbjct: 931  KVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRK 990

Query: 692  TMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             M ++ + KE GCSWIE   ++H F++    HP+S+E++  L+ L+  M+
Sbjct: 991  KMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMR 1040



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 157/606 (25%), Positives = 279/606 (46%), Gaps = 43/606 (7%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           RS   W  L++       +   +     M  +    +      +L+A + + D   G+QI
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352

Query: 182 HAFAIKSGF--ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           HA   K G    ++V V  SL++MY   G    A  VF  +  +D    N MI    +  
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVC-YENLGVEEGKQLHGLAVKFGVVREISVG 298
           E E++ H+F  +LS + +P  +T  +V   C +   GV  GKQ+H   ++ G +R  +  
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYT-N 471

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA+VTMY + G   +A+ +F     ++L+SW  +IS   ++    +A+      +  G+ 
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARM 417
            D   LA+V+  CS    L +G ++H +A+++G L  +  +GTALVD+Y      K  R+
Sbjct: 532 PDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL 591

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME--PDPVTFSRLLSLSA 475
           + DG   +  A +NA+L+G+     DD+   + LF +  ++  E  P+  TF+ +L    
Sbjct: 592 VFDGVVRRTVAVWNALLAGYARNEFDDQ--ALRLFVEM-ISESEFCPNATTFASVLPACV 648

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
                     +H Y +K G+  D  V NAL+ MY++ G ++ +  IF  ++ RDIVSWN 
Sbjct: 649 RCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNT 708

Query: 536 MLSAYALHGLGKGALLLFEEMKRE------------------GFAPDDISILGVLQAC-I 576
           M++   + G    AL L  EM+R                    F P+ ++++ VL  C  
Sbjct: 709 MITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAA 768

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
            + L +G       ++Q   +   +   + +VD+  + G L+ A  + +  P   + + W
Sbjct: 769 LAALGKGKEIHAYAVKQKLAMDVAVG--SALVDMYAKCGCLNLASRVFDQMPI-RNVITW 825

Query: 637 RTLVSVSKLMANSK-----FSILA----SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
             L+    +    +     F I+     S R + + P +  ++I +    +  GM+DE  
Sbjct: 826 NVLIMAYGMHGKGEEALELFRIMTAGGGSNREV-IRPNEV-TYIAIFAACSHSGMVDEGL 883

Query: 688 KVRTTM 693
            +  TM
Sbjct: 884 HLFHTM 889


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 212/676 (31%), Positives = 356/676 (52%), Gaps = 11/676 (1%)

Query: 74  LKLGQAVHAFLLKS--GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           LK  + VH FLLKS   + +     N++ + Y+K + +D A +LFD M  R+  +WT LI
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G  ++G +       C+M       ++   S IL+ C  L+    G  +HA  +  GF 
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFT 203

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++ FV T+L++MY       ++  VF  +   +V   N MI  +        AF +F+ +
Sbjct: 204 SHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRM 263

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           +     P+  TF  V         V + K++ G A++ GV     VG A++ M  K G  
Sbjct: 264 MGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSL 323

Query: 312 EEAERMFDA--ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           +EA  +F++  I+ R    W A+ISGY+RSG   KA+  F +     I  D     +V +
Sbjct: 324 QEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFN 383

Query: 370 GCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             +    L LG ++H  AIK G  ++ V +  A+ + YAK G L+  R + +    +   
Sbjct: 384 AIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLI 443

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            + ++++ + +    + +  + +FS  R  G+ P+  TFS +L   A+   L  G+ +H 
Sbjct: 444 SWTSLVTAYSQ--CSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHG 501

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
              K G   D  + +AL+ MYAKCG +  A ++F  IS+ D VSW A+++ +A HG+   
Sbjct: 502 IICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDD 561

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF  M + G  P+ ++ L VL AC + GL E G+  F  +++ YGL P +EH+AC+V
Sbjct: 562 ALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIV 621

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLL R G L++AM  I+  P   + ++W+TL+   ++  N +   LA++++L  + +++ 
Sbjct: 622 DLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSA 681

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++L+SN Y   G   +   +R  M +  + KE GCSWI ++  LH F A  + HPE ++
Sbjct: 682 TYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDK 741

Query: 729 IYSKLDLLNDEMKLKV 744
           IY+KL    +E+KLK+
Sbjct: 742 IYAKL----EELKLKL 753


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 209/674 (31%), Positives = 352/674 (52%), Gaps = 6/674 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +++  I   D    +A+H  +LK GS  D F  N L+N Y K      A  LFD M  R+
Sbjct: 55  MLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++ +L +GY      +  +G+   ++R   + N H  +  L+    L+       +H+
Sbjct: 115 NVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHS 170

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G+++N FVG +LI+ Y   G    A +VF G+  KD+     ++  Y + G  E 
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFED 230

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           +  +   +    F PN+YTF   +            K +HG  +K     +  VG  ++ 
Sbjct: 231 SLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQ 290

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           +Y + G   +A ++F+ + + +++ W+ +I+ + ++G   KA++ F+   +  +  +   
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFT 350

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L+++++GC++     LG QLHG  +K G+  DV +  AL+D+YAK   + +A  L    S
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELS 410

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K    +N ++ G+ E + +  +  + +F +     +    VTFS  L   AS A +  G
Sbjct: 411 SKNVVSWNTVIVGY-ENLGEGGK-ALNMFREALRNQVSVTEVTFSSALGACASLASMELG 468

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             +H  +IKT  A  V V N+LI MYAKCG I  A  +F  +   D+ SWNA++S Y+ H
Sbjct: 469 VQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTH 528

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           GLG+ AL +F+ MK     P+ ++ LGVL  C  +GL + G   F  +   +G+ P LEH
Sbjct: 529 GLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEH 588

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           + CMV L GR+G+L +AMNLI   P+  S ++WR ++S S    N +F+  +++ +L + 
Sbjct: 589 YTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKIN 648

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           PKD  +++L+SNMYAG       A +R +M +  + KE G SWIE    +H F     DH
Sbjct: 649 PKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDH 708

Query: 724 PESEEIYSKLDLLN 737
           P+ + I   L+ LN
Sbjct: 709 PDMKLINGMLEWLN 722



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 197/451 (43%), Gaps = 33/451 (7%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            + H    +L  C    D +  + IH   +K G   ++F    L++ Y  +G  ++A N+
Sbjct: 47  LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  +  ++   V+++ L    A +  +  +  +H    +  P  + FT+ + +       
Sbjct: 107 FDEMPERNN--VSYVTLTQGYACQDPVGLYSRLHREGHELNP--HVFTSFLKLFVSLDKA 162

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
           E    LH   VK G      VG A++  Y   G  + A  +F+ I  ++++ W  ++S Y
Sbjct: 163 EICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCY 222

Query: 337 VRSGHGGKAIN-----GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           V +G    ++      G   F+      D++  A++  G            +HG  +K  
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGA-----FHFAKSVHGQILKTC 277

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS-----GFMEKIADDEE 446
           Y  D R+G  L+ +Y + GD+  A  + +         ++ +++     GF  K  D   
Sbjct: 278 YELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVD--- 334

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
               +F + R   + P+  T S +L+  A   C   G  LH   +K G+  DV V NALI
Sbjct: 335 ----IFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALI 390

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            +YAKC  +D A ++F  +S +++VSWN ++  Y   G G  AL +F E  R   +  ++
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEV 450

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +    L AC      E G+       Q++GL
Sbjct: 451 TFSSALGACASLASMELGV-------QVHGL 474


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 208/682 (30%), Positives = 354/682 (51%), Gaps = 56/682 (8%)

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W +LI+  +  G  +  LG  C M R     + +T   +L+AC  +     G  +HA   
Sbjct: 95  WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGL---AYKDVRCVNFMILEYNKAGESEM 243
            +G  +NVF+  S+++MY   G   +A  +F  +     +D+   N ++  Y + G+S  
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214

Query: 244 AFHVFVHL---LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           A  +   +    S    P+  T  N++  C     ++ GKQ+HG +V+ G+V ++ VGNA
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISW------------------------------- 329
           +V+MY K     EA ++F+ I +++++SW                               
Sbjct: 275 LVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLD 334

Query: 330 ----TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
               +A+I+GY + GHG +A++ F +    G+  +   LA+++ GC+    L  G Q H 
Sbjct: 335 VITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHA 394

Query: 386 FAIKH-------GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK--YTAEFNAILSG 436
           + IK+           D+ +   L+D+YAK    + AR + D    K      +  ++ G
Sbjct: 395 YVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGG 454

Query: 437 FMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           + +    +  D + LF+Q  ++   ++P+  T S  L   A    L  GR LHAY+++  
Sbjct: 455 YAQH--GEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNE 512

Query: 495 YAADVI-VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
             ++V+ VGN LI MY+K G ID A  +F  +  R++VSW ++++ Y +HG G+ AL LF
Sbjct: 513 NESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLF 572

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           ++M++ GFA D I+ L VL AC +SG+ + G+  F+++ + +G+ P  EH+ACMVDLLGR
Sbjct: 573 DQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGR 632

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AGRL+EAM LI +     + ++W  L+S S++ AN +    A+ +L +L  ++ GS+ L+
Sbjct: 633 AGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLL 692

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS-K 732
           SN+YA      + A++R+ M    + K  GCSWI+       F    + HPESE+IY+  
Sbjct: 693 SNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLL 752

Query: 733 LDLLNDEMKLKVKDSSAFELQD 754
           LDL+     +     ++F L D
Sbjct: 753 LDLIKRIKDMGYVPQTSFALHD 774



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 248/528 (46%), Gaps = 61/528 (11%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA---ITWTSL 130
           L+ G +VHA +  +G  ++ F  N+++ +Y +   LD A ++FD +L R     ++W S+
Sbjct: 143 LRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSI 202

Query: 131 IKGYLDDGDYESVLGIACDM---YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
           +  Y+  G   + L IA  M   Y  + + +  T   IL AC+ +     G+Q+H F+++
Sbjct: 203 LAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVR 262

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
           +G  ++VFVG +L+SMY       EA  VF G+  KDV   N M+  Y++ G  + A  +
Sbjct: 263 NGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSL 322

Query: 248 FVHLLSSD-----------------------------------FEPNDYTFTNVISVCYE 272
           F  +   D                                    EPN  T  +++S C  
Sbjct: 323 FKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCAS 382

Query: 273 NLGVEEGKQLHGLAVKFGVVR--------EISVGNAIVTMYGKHGMSEEAERMFDAI--S 322
              +  GKQ H   +K  ++         ++ V N ++ MY K      A  +FD+I   
Sbjct: 383 VGALLYGKQTHAYVIK-NILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGK 441

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFL--DLGICCDSSCLATVIDGCSVCSNLELG 380
           ++N+++WT +I GY + G    A+  F +       +  ++  L+  +  C+    L LG
Sbjct: 442 DKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLG 501

Query: 381 LQLHGFAIKHGYLSDV-RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
            QLH +A+++   S+V  +G  L+D+Y+K GD+ +AR + D    +    + ++++G+  
Sbjct: 502 RQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGY-- 559

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
            +    E+ + LF Q +  G   D +TF  +L  + S + +V    ++ + +  G+    
Sbjct: 560 GMHGRGEEALHLFDQMQKLGFAVDGITFLVVL-YACSHSGMVDQGMIYFHDMVKGFGITP 618

Query: 500 IVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
              +   ++ +  + G ++ A ++ K +S +   V W A+LSA  +H 
Sbjct: 619 GAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHA 666



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 149/323 (46%), Gaps = 9/323 (2%)

Query: 302 VTMYGKHGMSEEAERMFDAI--SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           V  Y + G S EA  +   +  S   +  W ALI   V+ G     +  + +   LG   
Sbjct: 66  VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D      V+  C    +L  G  +H     +G  S+V +  ++V +Y + G L  A  + 
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185

Query: 420 DGF---SCKYTAEFNAILSGFMEKIADDEEDVMVLF--SQQRLAGMEPDPVTFSRLLSLS 474
           D       +    +N+IL+ +++        + + F         + PD +T   +L   
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQG-GQSRTALRIAFRMGNHYSLKLRPDAITLVNILPAC 244

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           AS   L  G+ +H +S++ G   DV VGNAL++MYAKC  ++ A ++F+GI  +D+VSWN
Sbjct: 245 ASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWN 304

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM++ Y+  G    AL LF+ M+ E    D I+   V+      G     + +F ++ Q+
Sbjct: 305 AMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QL 363

Query: 595 YGLRPILEHFACMVDLLGRAGRL 617
           YGL P +   A ++      G L
Sbjct: 364 YGLEPNVVTLASLLSGCASVGAL 386



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 14/278 (5%)

Query: 72  GDLKLGQAVHAFLLKS-------GSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LVR 122
           G L  G+  HA+++K+         ++D    N LI++YAK     VA+ +FD +    +
Sbjct: 384 GALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDK 443

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEE--KFNEHTCSVILEACSLLEDRIFGEQ 180
           + +TWT +I GY   G+    L +   +++ +   K N  T S  L AC+ L +   G Q
Sbjct: 444 NVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQ 503

Query: 181 IHAFAIKSGFENNV-FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +HA+A+++  E+ V +VG  LI MY  SG    A  VF  +  ++V     ++  Y   G
Sbjct: 504 LHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHG 563

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVG 298
             E A H+F  +    F  +  TF  V+  C  +  V++G    H +   FG+       
Sbjct: 564 RGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHY 623

Query: 299 NAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
             +V + G+ G   EA  +   +S E   + W AL+S 
Sbjct: 624 ACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSA 661



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 90/172 (52%), Gaps = 10/172 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDT-FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           G+L+LG+ +HA+ L++ ++++  +  N LI++Y+K   +D A+ +FD M +R+ ++WTSL
Sbjct: 496 GELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSL 555

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRI--FGEQIHAFA 185
           + GY   G  E  L +   M +     +  T  V+L ACS   +++  +  F + +  F 
Sbjct: 556 MTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFG 615

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           I  G E+       ++ +   +G   EA  + + ++ +    V   +L  ++
Sbjct: 616 ITPGAEHY----ACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASR 663


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 203/668 (30%), Positives = 354/668 (52%), Gaps = 2/668 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           +  GQ VH   ++ G   + +    LINLYAK   +D A  +FD + V++ +TWT++I G
Sbjct: 130 VSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITG 189

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G     L +   M     + +    +  + ACS L     G Q H +A +   E +
Sbjct: 190 YSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETD 249

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             V  +LI +Y        A  +F  +  +++     MI  Y +      A  +F  L  
Sbjct: 250 ASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQ 309

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
             ++P+ +   ++++ C     + +G+Q+H  A+K  +  +  V N+++ MY K     E
Sbjct: 310 EGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTE 369

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F+A++E + IS+ A+I GY R G    AI+ F +     +        +++   S 
Sbjct: 370 ARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSS 429

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            S +EL  Q+HG  +K G   D+  G++L+D+Y+K   ++ A+ + +    +    +NA+
Sbjct: 430 QSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAM 489

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + G  +   +  E+ + LF+Q +++G+ P+  TF  L++++++   +  G+  HA  IK 
Sbjct: 490 IFGLAQN--EQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKA 547

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G  +D  V NALI MYAKCG I     +F+    +D++ WN+M+S YA HG  + AL +F
Sbjct: 548 GADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVF 607

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
             M   G  P+ ++ +GVL AC ++GL + G+  F+ ++  Y + P  EH+A +V+L GR
Sbjct: 608 RMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGR 667

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           +G+L  A   I   P   +  +WR+L+S   L  N +    A++  L  +P D+G  +L+
Sbjct: 668 SGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLM 727

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+YA +G+  +A K+R  M+   + KE G SWIE+  ++H F+A G++HPE++ IYS L
Sbjct: 728 SNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLL 787

Query: 734 DLLNDEMK 741
           D L   +K
Sbjct: 788 DELTSILK 795



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 178/658 (27%), Positives = 327/658 (49%), Gaps = 22/658 (3%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           HA  + +G+  D F AN L+  Y+K  R+  A++LFD M  ++ ++W S I  +   G  
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 141 ESVLGIACDMYRSE--EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
           E  + +     R+   E  NE   +  L AC+      FG+Q+H  A++ G + NV+VGT
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +LI++Y   GC   A  VF  L  K+      +I  Y++ G+  +A  +F  +      P
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           + +   + +S C     +E G+Q HG A +  V  + SV NA++ +Y K      A ++F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           D +  RNL+SWT +I+GY+++    +A+  F +    G   D    A++++ C   + + 
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
            G Q+H  AIK    SD  +  +L+D+YAK   L  AR + +  +      +NA++ G+ 
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
                D    + +FS+ R   ++P P+TF  LL +S+SQ+ +   + +H   +K+G + D
Sbjct: 394 R--LGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLD 451

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           +  G++LI +Y+K   ++ A  +F  + +RD+V WNAM+   A +  G+ A+ LF +++ 
Sbjct: 452 LYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQV 511

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIE---QIYGLRPILEHFA--CMVDLLGR 613
            G AP++ + + ++   + S L    + +F+  +   QI       +H     ++D+  +
Sbjct: 512 SGLAPNEFTFVALVT--VASTL----VSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAK 565

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL--LDLEPKDAGSFI 671
            G + E   L+  S   +  + W +++S       ++ ++   + +    +EP    +F+
Sbjct: 566 CGFIKEG-RLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYV-TFV 623

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
            V +  A  G++DE  +    M   + + E G       S ++ F  SGK H   E I
Sbjct: 624 GVLSACAHAGLVDEGLRHFDFMKT-KYAIEPGTE--HYASVVNLFGRSGKLHAAKEFI 678



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 239/476 (50%), Gaps = 6/476 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ G+  H +  +   + D    N LI+LY K +RL +A+KLFD M  R+ ++WT++I
Sbjct: 229 GFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMI 288

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY+ +      + +   + +   + +   C+ IL +C  L     G Q+HA AIK+  E
Sbjct: 289 AGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLE 348

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++ +V  SLI MY       EA  VF  LA  D    N MI  Y++ G+   A  VF  +
Sbjct: 349 SDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKM 408

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                +P+  TF +++ V      +E  KQ+HGL VK G   ++  G++++ +Y K  + 
Sbjct: 409 RYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLV 468

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+A+ +F+ +  R+++ W A+I G  ++  G +A+  F +    G+  +      ++   
Sbjct: 469 EDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVA 528

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S   ++  G Q H   IK G  SD  +  AL+D+YAK G +K  R+L +    K    +N
Sbjct: 529 STLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWN 588

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           +++S + +      E+ + +F      G+EP+ VTF  +LS + + A LV     H   +
Sbjct: 589 SMISTYAQH--GQAEEALYVFRMMGGTGVEPNYVTFVGVLS-ACAHAGLVDEGLRHFDFM 645

Query: 492 KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG 544
           KT YA +    +  +++ ++ + G +  A +  + +      + W ++LSA  L G
Sbjct: 646 KTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFG 701



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%), Gaps = 2/274 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +S     ++L + +H  ++KSG+  D +  ++LI++Y+KF+ ++ A+ +F+ M  R 
Sbjct: 423 LLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRD 482

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W ++I G   +   E  + +   +  S    NE T   ++   S L     G+Q HA
Sbjct: 483 MVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHA 542

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             IK+G +++  V  +LI MY   G  +E   +F     KDV C N MI  Y + G++E 
Sbjct: 543 QIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEE 602

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIV 302
           A +VF  +  +  EPN  TF  V+S C     V+EG +    +  K+ +        ++V
Sbjct: 603 ALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVV 662

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
            ++G+ G    A+   + +  E     W +L+S 
Sbjct: 663 NLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSA 696


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 212/676 (31%), Positives = 356/676 (52%), Gaps = 11/676 (1%)

Query: 74  LKLGQAVHAFLLKS--GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           LK  + VH FLLKS   + +     N++ + Y+K + +D A +LFD M  R+  +WT LI
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G  ++G +       C+M       ++   S IL+ C  L+    G  +HA  +  GF 
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFT 203

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++ FV T+L++MY       ++  VF  +   +V   N MI  +        AF +F+ +
Sbjct: 204 SHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRM 263

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           +     P+  TF  V         V + K++ G A++ GV     VG A++ M  K G  
Sbjct: 264 MGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSL 323

Query: 312 EEAERMFDA--ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           +EA  +F++  I+ R    W A+ISGY+RSG   KA+  F +     I  D     +V +
Sbjct: 324 QEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFN 383

Query: 370 GCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             +    L LG ++H  AIK G  ++ V +  A+ + YAK G L+  R + +    +   
Sbjct: 384 AIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLI 443

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            + ++++ + +    + +  + +FS  R  G+ P+  TFS +L   A+   L  G+ +H 
Sbjct: 444 SWTSLVTAYSQ--CSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHG 501

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
              K G   D  + +AL+ MYAKCG +  A ++F  IS+ D VSW A+++ +A HG+   
Sbjct: 502 IICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDD 561

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF  M + G  P+ ++ L VL AC + GL E G+  F  +++ YGL P +EH+AC+V
Sbjct: 562 ALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIV 621

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLL R G L++AM  I+  P   + ++W+TL+   ++  N +   LA++++L  + +++ 
Sbjct: 622 DLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSA 681

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++L+SN Y   G   +   +R  M +  + KE GCSWI ++  LH F A  + HPE ++
Sbjct: 682 TYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDK 741

Query: 729 IYSKLDLLNDEMKLKV 744
           IY+KL    +E+KLK+
Sbjct: 742 IYAKL----EELKLKL 753


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 205/658 (31%), Positives = 353/658 (53%), Gaps = 6/658 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           + +FL+KSG   D +    LI+ Y K   +D A+ +FD +  +S +TWT++I G +  G 
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
               L +   +       + +  S +L ACS+L     G+QIHA  ++ G E +  +   
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           LI  Y   G    A  +F G+  K++     ++  Y +    + A  +F  +     +P+
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
            Y  +++++ C     +  G Q+H   +K  +  +  V N+++ MY K     +A ++FD
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID---GCSVCSN 376
             +  +++ + A+I GY R G   +       F D+        L T +      +  ++
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTS 469

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L L  Q+HG   K+G   D+  G+AL+D+Y+    LK +R++ D    K    +N++ +G
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG 529

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           ++++   + E+ + LF + +L+   PD  TF+ +++ + + A +  G+  H   +K G  
Sbjct: 530 YVQQ--SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +  + NAL+ MYAKCGS + A + F   + RD+V WN+++S+YA HG GK AL + E+M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
             EG  P+ I+ +GVL AC ++GL E G+  F E+   +G+ P  EH+ CMV LLGRAGR
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQF-ELMLRFGIEPETEHYVCMVSLLGRAGR 706

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L++A  LI   P   + ++WR+L+S      N + +  A++  +  +PKD+GSF ++SN+
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNI 766

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           YA +GM  EA KVR  M    + KE G SWI I+ ++H F++  K H ++ +IY  LD
Sbjct: 767 YASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLD 824



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 263/521 (50%), Gaps = 8/521 (1%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           ++ +L+++      L     VH  ++  G + DT+ +N LINLY++   +  A+K+F+ M
Sbjct: 46  EFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM 105

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS-EEKFNEHTCSVILEACSLLEDR--- 175
             R+ ++W++++      G YE  L +  + +R+ ++  NE+  S  ++ACS L+ R   
Sbjct: 106 PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW 165

Query: 176 -IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
            +F  Q+ +F +KSGF+ +V+VGT LI  Y   G    A  VF  L  K       MI  
Sbjct: 166 MVF--QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG 223

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
             K G S ++  +F  L+  +  P+ Y  + V+S C     +E GKQ+H   +++G+  +
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
            S+ N ++  Y K G    A ++F+ +  +N+ISWT L+SGY ++    +A+  F     
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G+  D    ++++  C+    L  G Q+H + IK    +D  +  +L+D+YAK   L  
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDE-EDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           AR + D F+      FNA++ G+       E  + + +F   R   + P  +TF  LL  
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
           SAS   L   + +H    K G   D+  G+ALI +Y+ C  +  +  +F  +  +D+V W
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           N+M + Y      + AL LF E++     PD+ +   ++ A
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA 564



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 182/367 (49%), Gaps = 4/367 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G  VHA+ +K+   ND++  N+LI++YAK + L  A+K+FD       + + ++I+G
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425

Query: 134 YLDDG---DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           Y   G   +    L I  DM     + +  T   +L A + L      +QIH    K G 
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             ++F G++LI +Y +  C +++  VF  +  KD+   N M   Y +  E+E A ++F+ 
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L  S   P+++TF N+++       V+ G++ H   +K G+     + NA++ MY K G 
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E+A + FD+ + R+++ W ++IS Y   G G KA+    + +  GI  +      V+  
Sbjct: 606 PEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSA 665

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA-E 429
           CS    +E GL+     ++ G   +      +V +  + G L  AR L++    K  A  
Sbjct: 666 CSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725

Query: 430 FNAILSG 436
           + ++LSG
Sbjct: 726 WRSLLSG 732



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 1/279 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++ S     L L + +H  + K G   D F  + LI++Y+    L  ++ +FD M V+ 
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W S+  GY+   + E  L +  ++  S E+ +E T + ++ A   L     G++ H 
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G E N ++  +L+ MY   G   +A   F   A +DV C N +I  Y   GE + 
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKK 639

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +   ++S   EPN  TF  V+S C     VE+G +   L ++FG+  E      +V+
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVS 699

Query: 304 MYGKHGMSEEAERMFDAISER-NLISWTALISGYVRSGH 341
           + G+ G   +A  + + +  +   I W +L+SG  ++G+
Sbjct: 700 LLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN 738


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 207/635 (32%), Positives = 332/635 (52%), Gaps = 10/635 (1%)

Query: 112  AQKLF----DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE 167
            A KLF    DG  V   I W   +  +L  G+    +    DM  S    +  T  V+L 
Sbjct: 887  ATKLFMYDDDGSDV---IVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLT 943

Query: 168  ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
              + L     G+QIH   ++SG +  V VG  LI+MY  +G    A +VF  +   D+  
Sbjct: 944  VVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLIS 1003

Query: 228  VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLA 286
             N MI     +G  E +  +FVHLL     P+ +T  +V+  C     G     Q+H  A
Sbjct: 1004 WNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACA 1063

Query: 287  VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI 346
            +K GVV +  V  A++ +Y K G  EEAE +F      +L SW A++ GY+ SG   KA+
Sbjct: 1064 MKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKAL 1123

Query: 347  NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
              ++   + G   D   L            L+ G Q+H   +K G+  D+ + + ++D+Y
Sbjct: 1124 RLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMY 1183

Query: 407  AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
             K G+++SAR +           +  ++SG +E     EE  +  + Q RL+ ++PD  T
Sbjct: 1184 LKCGEMESARRVFSEIPSPDDVAWTTMISGCVEN--GQEEHALFTYHQMRLSKVQPDEYT 1241

Query: 467  FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
            F+ L+   +    L +GR +HA  +K   A D  V  +L+ MYAKCG+I+ A  +FK  +
Sbjct: 1242 FATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTN 1301

Query: 527  DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
             R I SWNAM+   A HG  K AL  F+ MK  G  PD ++ +GVL AC +SGL      
Sbjct: 1302 TRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYE 1361

Query: 587  LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
             F  +++ YG+ P +EH++C+VD L RAGR+ EA  +I+S PF  S  ++RTL++  ++ 
Sbjct: 1362 NFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQ 1421

Query: 647  ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
             + +     +++LL LEP D+ +++L+SN+YA     +  A  R  M  + + K+ G SW
Sbjct: 1422 VDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSW 1481

Query: 707  IEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            +++ +K+H FVA  + H E++ IY+K++ +   ++
Sbjct: 1482 VDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIR 1516



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 189/755 (25%), Positives = 334/755 (44%), Gaps = 117/755 (15%)

Query: 33   SPNPKSQVAYLCSI-------SSVSCSERTLLFNDWPQ---LVKISIGSGDLKLGQAVHA 82
            +P+P + +  L  +       ++   + R  L +  PQ   +++ +I + DL LG+  HA
Sbjct: 621  NPSPTAMIMALMHLRLRAATSTANPLTPRAHLIHSLPQCFSILRQAIAASDLSLGKRAHA 680

Query: 83   FLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LVRSAITWTSLIKGYLDDGDY 140
             +L SG   D F  NNLI +YAK   L  A+KLFD      R  +TW +++       D 
Sbjct: 681  RILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADK 740

Query: 141  -ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
                  +   + RS      HT + + + C L       E +H +A+K G + +VFV  +
Sbjct: 741  SHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGA 800

Query: 200  LISMY----------------------------------------------FHSGCFREA 213
            L+++Y                                              FH   FR  
Sbjct: 801  LVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPD 860

Query: 214  ENVFRGLAYKDVRCVN---------------FM-------ILEYNKA-------GESEMA 244
            +   R L+ + V+C                 FM       ++ +NKA       GE+  A
Sbjct: 861  DVTLRTLS-RVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEA 919

Query: 245  FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
               FV +++S    +  TF  +++V      +E GKQ+HG+ ++ G+ + +SVGN ++ M
Sbjct: 920  VDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINM 979

Query: 305  YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
            Y K G    A  +F  ++E +LISW  +ISG   SG    ++  F+  L   +  D   +
Sbjct: 980  YVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTV 1039

Query: 365  ATVIDGCSVCSNLE----LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL- 419
            A+V+     CS+LE    L  Q+H  A+K G + D  + TAL+D+Y+K G ++ A  L  
Sbjct: 1040 ASVL---RACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFV 1096

Query: 420  --DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
              DGF     A +NAI+ G++  ++ D    + L+   + +G   D +T       +   
Sbjct: 1097 NQDGFDL---ASWNAIMHGYI--VSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGL 1151

Query: 478  ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
              L +G+ +HA  +K G+  D+ V + ++ MY KCG ++ A ++F  I   D V+W  M+
Sbjct: 1152 VGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMI 1211

Query: 538  SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIEQIYG 596
            S    +G  + AL  + +M+     PD+ +   +++AC + + L +G     N ++    
Sbjct: 1212 SGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCA 1271

Query: 597  LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK-----F 651
              P +     +VD+  + G + +A  L   +  +     W  ++       N+K     F
Sbjct: 1272 FDPFV--MTSLVDMYAKCGNIEDARGLFKRTN-TRRIASWNAMIVGLAQHGNAKEALQFF 1328

Query: 652  SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
              + S+ ++     D  +FI V +  +  G++ EA
Sbjct: 1329 KYMKSRGVM----PDRVTFIGVLSACSHSGLVSEA 1359



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 177/402 (44%), Gaps = 4/402 (0%)

Query: 72   GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            G   L   +HA  +K+G   D+F +  LI++Y+K  +++ A+ LF         +W +++
Sbjct: 1051 GGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIM 1110

Query: 132  KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             GY+  GD+   L +   M  S E+ ++ T     +A   L     G+QIHA  +K GF 
Sbjct: 1111 HGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFN 1170

Query: 192  NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             ++FV + ++ MY   G    A  VF  +   D      MI    + G+ E A   +  +
Sbjct: 1171 LDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQM 1230

Query: 252  LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
              S  +P++YTF  ++  C     +E+G+Q+H   VK     +  V  ++V MY K G  
Sbjct: 1231 RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNI 1290

Query: 312  EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            E+A  +F   + R + SW A+I G  + G+  +A+  F      G+  D      V+  C
Sbjct: 1291 EDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSAC 1350

Query: 372  SVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            S    +    +  +     +G   ++   + LVD  ++ G ++ A  ++     + +A  
Sbjct: 1351 SHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASM 1410

Query: 431  NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
               L        D E    V    ++L  +EP       LLS
Sbjct: 1411 YRTLLNACRVQVDRETGKRV---AEKLLALEPSDSAAYVLLS 1449



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 5/287 (1%)

Query: 36   PKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFE 95
            PK+   Y+    S   S++  L N      K + G   LK G+ +HA ++K G   D F 
Sbjct: 1120 PKALRLYILMQESGERSDQITLVN----AAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFV 1175

Query: 96   ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
             + ++++Y K   ++ A+++F  +     + WT++I G +++G  E  L     M  S+ 
Sbjct: 1176 TSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKV 1235

Query: 156  KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
            + +E+T + +++ACSLL     G QIHA  +K     + FV TSL+ MY   G   +A  
Sbjct: 1236 QPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARG 1295

Query: 216  VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC-YENL 274
            +F+    + +   N MI+   + G ++ A   F ++ S    P+  TF  V+S C +  L
Sbjct: 1296 LFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGL 1355

Query: 275  GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
              E  +  + +   +G+  EI   + +V    + G  EEAE++  ++
Sbjct: 1356 VSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSM 1402


>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g47840
 gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
 gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 706

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 209/645 (32%), Positives = 350/645 (54%), Gaps = 6/645 (0%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F+ N+ +        L  A+++FD M     ++WTS+IK Y+   + +  L +   M   
Sbjct: 41  FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100

Query: 154 EEKFNEHTC--SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
           +   +  T   SV+L+AC    +  +GE +HA+A+K+   ++V+VG+SL+ MY   G   
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           ++  VF  + +++      +I     AG  +     F  +  S+   + YTF   +  C 
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
               V+ GK +H   +  G V  + V N++ TMY + G  ++   +F+ +SER+++SWT+
Sbjct: 221 GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS 280

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           LI  Y R G   KA+  F++  +  +  +    A++   C+  S L  G QLH   +  G
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
               + +  +++ +Y+  G+L SA +L  G  C+    ++ I+ G+ +  A   E+    
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQ--AGFGEEGFKY 398

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           FS  R +G +P     + LLS+S + A +  GR +HA ++  G   +  V ++LI MY+K
Sbjct: 399 FSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSK 458

Query: 512 CGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           CGSI  A  IF G +DR DIVS  AM++ YA HG  K A+ LFE+  + GF PD ++ + 
Sbjct: 459 CGSIKEASMIF-GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFIS 517

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC +SG  + G   FN +++ Y +RP  EH+ CMVDLL RAGRLS+A  +IN   + 
Sbjct: 518 VLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWK 577

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
           +  ++W TL+   K   + +    A++R+L+L+P  A + + ++N+Y+  G L+EAA VR
Sbjct: 578 KDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVR 637

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
             M    + KE G S I+I   +  FV+  + HP+SE+IY+ L+L
Sbjct: 638 KNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILEL 682



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 206/402 (51%), Gaps = 2/402 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S ++  G+++HA+ +K+   +  +  ++L+++Y +  ++D + ++F  M  R+A+TWT++
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI 180

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G +  G Y+  L    +M RSEE  + +T ++ L+AC+ L    +G+ IH   I  GF
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
              + V  SL +MY   G  ++   +F  ++ +DV     +I+ Y + G+   A   F+ 
Sbjct: 241 VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIK 300

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + +S   PN+ TF ++ S C     +  G+QLH   +  G+   +SV N+++ MY   G 
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 360

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A  +F  +  R++ISW+ +I GY ++G G +    F      G       LA+++  
Sbjct: 361 LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSV 420

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
               + +E G Q+H  A+  G   +  + ++L+++Y+K G +K A M+            
Sbjct: 421 SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL 480

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            A+++G+ E      ++ + LF +    G  PD VTF  +L+
Sbjct: 481 TAMINGYAEH--GKSKEAIDLFEKSLKVGFRPDSVTFISVLT 520



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 177/365 (48%), Gaps = 7/365 (1%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K   G   +K G+A+H  ++  G       AN+L  +Y +   +     LF+ M  R  
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WTSLI  Y   G     +     M  S+   NE T + +  AC+ L   ++GEQ+H  
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +  G  +++ V  S++ MY   G    A  +F+G+  +D+   + +I  Y +AG  E  
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F  F  +  S  +P D+   +++SV      +E G+Q+H LA+ FG+ +  +V ++++ M
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  +EA  +F      +++S TA+I+GY   G   +AI+ F + L +G   DS   
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT----ALVDIYAKGGDLKSARMLLD 420
            +V+  C+    L+LG       ++  Y  ++R        +VD+  + G L  A  +++
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNM-MQETY--NMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572

Query: 421 GFSCK 425
             S K
Sbjct: 573 EMSWK 577


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 207/669 (30%), Positives = 344/669 (51%), Gaps = 4/669 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++ G+ V + +  SG   D      L+ +Y K   L   + +FD +       W  +I  
Sbjct: 166 IRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISE 225

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G+Y   + +   M     K N +T S IL+  + +     G Q+H    K GF + 
Sbjct: 226 YSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSY 285

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             V  SLIS YF     R A+ +F  L  +DV   N MI  Y K G  +    +F+ +L 
Sbjct: 286 NTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLV 345

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMYGKHGMSE 312
              + +  T  NV   C     +  GK LH  ++K   + RE+   N ++ MY K G   
Sbjct: 346 FGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLN 405

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A R+F+ + E+ ++SWT++I+GYVR G    AI  F E    G+  D   + ++++ C+
Sbjct: 406 SAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACA 465

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
           +  NL+ G  +H +  ++   ++  +  AL D+YAK G +K A  +      K    +N 
Sbjct: 466 INGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNT 525

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++ G+ +    +E   + LF++ +    +PD  T + +L   AS A L +GR +H Y+++
Sbjct: 526 MIGGYTKNSLPNE--ALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALR 582

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            GY+ D  V NA++ MY KCG +  A  +F  I ++D+VSW  M++ Y +HG G  A+  
Sbjct: 583 NGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINT 642

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F +M+  G  PD++S + +L AC +SGL + G  +FN +++   + P LEH+ACMVDLL 
Sbjct: 643 FNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLA 702

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           R G L +A   I + P      +W  L+   ++  + K +   ++R+ +LEP++ G ++L
Sbjct: 703 RTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVL 762

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           ++N+YA     +E  K+R  +    L K  GCSWIEI  K++ FVA     P++++I   
Sbjct: 763 LANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELL 822

Query: 733 LDLLNDEMK 741
           L  L  +MK
Sbjct: 823 LKRLRSKMK 831


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 210/702 (29%), Positives = 361/702 (51%), Gaps = 35/702 (4%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD---VAQKLFD 117
           +  L++  I S   + G+++H  ++ +G   D +    ++ LYA+   LD    A+KLF+
Sbjct: 74  YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  R+   W ++I  Y    DY    GI   M +     +  T +  L  C  L  R  
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 193

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+H+  I  GF+ + FVG +LI MY           VF  +  ++    N +I    +
Sbjct: 194 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 253

Query: 238 AGESEMAFHVFVHLLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            G    A  +F+ +  S+   +P+ +TFT ++++C       +G+Q+H   ++  + + I
Sbjct: 254 FGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI 313

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V   +V MY + G    A+ +F+ ++ERN  SW ++I GY ++G   +A+  F +    
Sbjct: 314 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 373

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           GI  D   L++++  C   S+ + G +LH F +++    +  L   LVD+YAK G +  A
Sbjct: 374 GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYA 433

Query: 416 RMLLDGFSCK--YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
             + D    K   TA +N+IL+G+  K    E      F +   + +E D +T   +++L
Sbjct: 434 WKVYDQTIKKDRNTALWNSILAGYANKGLKKES--FNHFLEMLESDIEYDVLTMVTIVNL 491

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
                                    +++  AL+ MY+KCG+I  A  +F  ++ ++IVSW
Sbjct: 492 -------------------------LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSW 526

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           NAM+S Y+ HG  K AL+L+EEM ++G  P++++ L +L AC ++GL E G+ +F  +++
Sbjct: 527 NAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQE 586

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            Y +    EH+ CMVDLLGRAGRL +A   +   P       W  L+   ++  +     
Sbjct: 587 DYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGR 646

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
           LA++RL +L+P++ G ++++SN+YA  G   E   +R  M    + K+ G SWIEI+S++
Sbjct: 647 LAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEI 706

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
             F A  K HP++EEIY+ L  L  + K L     ++F LQ+
Sbjct: 707 QIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQN 748



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 3/116 (2%)

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG---AF 519
           +P+ +S L+          RG+S+H   I  GY  D  +   ++ +YA+ G +D    A 
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           ++F+ + +R++ +WN M+ AYA       A  +F+ M + G  PD+ +    L+ C
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVC 185


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 211/691 (30%), Positives = 358/691 (51%), Gaps = 25/691 (3%)

Query: 61   WPQLVKISIGSGDLKLGQAVHAFLL-----KSGSQNDTFEANNLINLYAKFNRLDVAQKL 115
            W  ++K     G ++LG    AF L     +SG + D F    ++N  ++ N  D  + L
Sbjct: 796  WNMMLK-----GYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVN-WDEGKWL 849

Query: 116  FDGMLVRSA-----------ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
             D +   +A             W   +   L  GD    +    +M      ++  T  V
Sbjct: 850  ADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLV 909

Query: 165  ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
            +L A +  +D   G+Q+H  A+KSG +++V V  SL++MY   GC   A  VF  + + D
Sbjct: 910  VLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD 969

Query: 225  VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL-GVEEGKQLH 283
            +   N MI    ++   E + ++F+ LL    +P+ +T  +V+  C   + G+   +Q+H
Sbjct: 970  LISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIH 1029

Query: 284  GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
              A+K G + +  V   ++ +Y K G  EEAE +F    + +L  W A++ GY+    G 
Sbjct: 1030 VHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGK 1089

Query: 344  KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
            KA+  F      G   D   LAT    C     L+ G Q+H  AIK G+ SD+ + + ++
Sbjct: 1090 KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 1149

Query: 404  DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
            D+Y K GD+ +A ++ +  S      + +++SG ++    +E+  + ++ + R + + PD
Sbjct: 1150 DMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDN--GNEDQALRIYHRMRQSRVMPD 1207

Query: 464  PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
              TF+ L+  S+    L +GR LHA  IK    +D  VG +L+ MYAKCG+I+ A+++FK
Sbjct: 1208 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFK 1267

Query: 524  GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
             ++ R+I  WNAML   A HG  + A+ LF+ MK  G  PD +S +G+L AC ++GL+  
Sbjct: 1268 KMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSE 1327

Query: 584  GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
                 + +   YG+ P +EH++C+VD LGRAG + EA  +I + PF  S  + R L+   
Sbjct: 1328 AYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGAC 1387

Query: 644  KLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAG 703
            ++  + +     + RL  LEP D+ +++L+SN+YA     D+    R  M    + K+ G
Sbjct: 1388 RIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPG 1447

Query: 704  CSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
             SWI++ + LH FV   + HP+++ IY K++
Sbjct: 1448 FSWIDVKNMLHLFVVDDRSHPQADIIYDKVE 1478



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 260/542 (47%), Gaps = 46/542 (8%)

Query: 64   LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
            L++ +I + +L LG+  HA ++ SGS  D F +NNL+ +Y+K   L  A+++FD    R 
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 124  AITWTSLIKGYL-----DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
             +TW +++  Y      +DG+ +  L +   +  S       T + +L+ C         
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 179  EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            E +H +AIK G E +VFV  +L+++Y   G  R+A  +F  +  +DV   N M+  Y + 
Sbjct: 747  EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 239  GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            G  + AF +F     S   P++++   +++   E +  +EGK L                
Sbjct: 807  GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSE-VNWDEGKWL---------------A 850

Query: 299  NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            + +     K  +S++   +F          W   +S  + +G    AI  F+    L I 
Sbjct: 851  DQVQAYAAKLSLSDDNPDVF---------CWNKKLSECLWAGDNWGAIECFVNMNGLNID 901

Query: 359  CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
             D+  L  V+   +   +LELG Q+HG A+K G  SDV +  +LV++Y+K G    AR +
Sbjct: 902  YDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREV 961

Query: 419  LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
             +         +N+++S   +  +  EE+ + LF      G++PD  T + +L   +S  
Sbjct: 962  FNDMKHLDLISWNSMISSCAQ--SSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS-- 1017

Query: 479  CLVRG----RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
             L+ G    R +H +++KTG  AD  V   LI +Y+K G ++ A  +F+   D D+  WN
Sbjct: 1018 -LIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWN 1076

Query: 535  AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
            AM+  Y +   GK AL LF  + + G   D I++    +AC       G + L ++ +QI
Sbjct: 1077 AMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKAC-------GCLVLLDQGKQI 1129

Query: 595  YG 596
            + 
Sbjct: 1130 HA 1131



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 16/161 (9%)

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           LL  + S   L+ G+  HA  + +G A D  + N L+TMY+KCGS+  A Q+F    +RD
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 530 IVSWNAMLSAYAL-----HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           +V+WNA+L AYA       G  +  L LF  ++    +   +++  VL+ C+ SG     
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSG----- 741

Query: 585 ICLF-NEIEQIYGLRPILEH----FACMVDLLGRAGRLSEA 620
            CL+  E    Y ++  LE        +V++  + GR+ +A
Sbjct: 742 -CLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDA 781


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 221/670 (32%), Positives = 351/670 (52%), Gaps = 54/670 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+A+HA ++KS S +  + AN+L+NLYAK  RL  A+ +F+ +  +  ++W  +I G
Sbjct: 22  LQKGKALHAQIIKS-SSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIING 80

Query: 134 YLDDGDYES--VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           Y   G   S  V+ +   M       N HT + +  A S L D   G   HA AIK    
Sbjct: 81  YSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSC 140

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VFVG+SL++MY  +G   EA  VF  +  ++      MI  Y     +  A  +F  +
Sbjct: 141 RDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLM 200

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
              +   N++ FT+V+S       V  GKQ+H +AVK G++  +SVGNA+VTMY K G  
Sbjct: 201 RREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSL 260

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++A + F+  S++N I+W+A+I+G  +SG   KA+  F      GI         VI+ C
Sbjct: 261 DDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINAC 320

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S       G Q+H + +K G+ S + + TALVD+YAK   +  AR   D         + 
Sbjct: 321 SDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWT 380

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           +++ G+++    + ED + L+ +  + G+ P+ +T + +L   +S A L +G+ +HA ++
Sbjct: 381 SMIGGYVQN--GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTV 438

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+  +V +G+AL TMYAKCG +     +F+ +  RD++SWNAM+S  + +G GK AL 
Sbjct: 439 KYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALE 498

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LFEEM+ EG  PD ++ + +L AC + GL E G   F  +   +G+ P +EH+ACMVD+L
Sbjct: 499 LFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDIL 558

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG+L EA+    S+       +W  +  V ++M                         
Sbjct: 559 SRAGKLKEAIEFTESATIDHG--MWEDVERVRRMM------------------------- 591

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
                           K+R       +SKE GCSWIE+ S +H FV   + HP+  +I+ 
Sbjct: 592 ----------------KLRG------VSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHV 629

Query: 732 KLDLLNDEMK 741
           +L  L+ +MK
Sbjct: 630 ELRQLSKQMK 639



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 160/321 (49%), Gaps = 7/321 (2%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P++ +F   +     N  +++GK LH   +K      + + N++V +Y K     EA+ +
Sbjct: 4   PSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFV 62

Query: 318 FDAISERNLISWTALISGYVRSGHGGKA--INGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           F+ I  ++++SW  +I+GY + G  G +  +  F          ++   A V    S   
Sbjct: 63  FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLV 122

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +   G   H  AIK     DV +G++L+++Y K G    AR + D    + +  +  ++S
Sbjct: 123 DAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMIS 182

Query: 436 GFM-EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           G+  +K+A    + + LF   R      +   F+ +LS       +  G+ +H  ++K G
Sbjct: 183 GYASQKLA---AEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 239

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             + V VGNAL+TMYAKCGS+D A Q F+  SD++ ++W+AM++  A  G    AL LF 
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFS 299

Query: 555 EMKREGFAPDDISILGVLQAC 575
            M   G  P + + +GV+ AC
Sbjct: 300 SMHLSGIRPSEFTFVGVINAC 320


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 195/680 (28%), Positives = 361/680 (53%), Gaps = 3/680 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P  V + + +   +L Q +   ++K+G  N+      L++L++K+  ++ A ++F+ +  
Sbjct: 51  PAAVLLELCTSMKELHQII-PLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           +    + +++KGY  +   E+ L   C M   + K   +  + +L+ C    D   G++I
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   I + F  NVF  T +++MY       +A  +F  +  +D+   N +I  +++ G +
Sbjct: 170 HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFA 229

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  + + +      P+  T   V+    +   +  GK +HG A++ G  + +++  A+
Sbjct: 230 KKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTAL 289

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
             MY K G  E A  +FD + ++ ++SW +++ GYV++G   KAI  F + L+ GI    
Sbjct: 290 ADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTG 349

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             +   +  C+   +LE G  +H F  +    SD+ +  +L+ +Y+K   +  A  + + 
Sbjct: 350 VTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            + +    +NA++ G+ +     E   +  FS+ +  GM+PD  T   ++   A  +   
Sbjct: 410 LNGRTHVSWNAMILGYAQNGRVSE--ALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTR 467

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
             + +H   I++    ++ V  AL+ MY+KCG+I  A ++F  ISDR +++WNAM+  Y 
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HGLG+ AL LF++MK+    P+DI+ L V+ AC +SGL + G+  F  ++Q YGL P +
Sbjct: 528 THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           +H+  MVDLLGRAGR+ EA + I + P S    ++  ++   K+  N +    A+K+L +
Sbjct: 588 DHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFE 647

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           L P + G  +L++N+YA      + A+VR TM    L K  GCS +E+ +++H F +   
Sbjct: 648 LNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGST 707

Query: 722 DHPESEEIYSKLDLLNDEMK 741
            HP+S+ IY+ L+ L  E+K
Sbjct: 708 THPQSKRIYAFLEELVYEIK 727


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 212/697 (30%), Positives = 358/697 (51%), Gaps = 25/697 (3%)

Query: 61  WPQLVK--ISIGSGDLKLG--QAVHAFLLKSGSQNDTFEANNLINLYAK---FNR----- 108
           W  ++K  + +G+GD  LG   A H    +SG + D      ++    K   F R     
Sbjct: 191 WNVMMKAYVEMGAGDEVLGLFSAFH----RSGLRPDCVSVRTILMGVGKKTVFERELEQV 246

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
              A KLF          W   +  YL  G+    +    DM +S    +  T  VIL  
Sbjct: 247 RAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSV 306

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
            + L     G+QIH   ++ G++  V V  S I+MY  +G    A  +F  +   D+   
Sbjct: 307 VASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISW 366

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE----GKQLHG 284
           N +I    ++G  E +  +F+ LL S   P+ +T T+V+  C     +EE    G+Q+H 
Sbjct: 367 NTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACS---SLEESYCVGRQVHT 423

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            A+K G+V +  V  A++ +Y K G  EEAE +F      +L SW A++ G+  S +  +
Sbjct: 424 CALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYRE 483

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+  F    + G   D    A           L+ G Q+H   IK  +  D+ + + ++D
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILD 543

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y K G++KSAR + +         +  ++SG +E    +EE  +  + Q RLAG++PD 
Sbjct: 544 MYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVEN--GEEEQALFTYHQMRLAGVQPDE 601

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
            TF+ L+   +    L +G+ +HA  +K   A D  V  +L+ MYAKCG+I+ A+ +F+ 
Sbjct: 602 YTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRR 661

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           ++ R +  WNAM+   A HG  + AL  F EMK  G  PD ++ +GVL AC +SGL+   
Sbjct: 662 MNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDA 721

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
              F+ +++ YG+ P +EH++C+VD L RAG + EA  +++S PF  S  ++RTL++  +
Sbjct: 722 YKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACR 781

Query: 645 LMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
           +  + +     +++L  ++P D+ +++L+SN+YA     + A   R  M  + + KE G 
Sbjct: 782 VQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGF 841

Query: 705 SWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           SWI++ +K+H FVA  + H E++ IY+K++ +   +K
Sbjct: 842 SWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIK 878



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 174/591 (29%), Positives = 292/591 (49%), Gaps = 58/591 (9%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L K+ +  G     +A+  + +K G Q D F A  L+N+YAKF R+  A+ LFD M VR 
Sbjct: 128 LFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRD 187

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIFGEQ 180
            + W  ++K Y++ G  + VLG+    +RS  + +  +   IL      ++ E  +  EQ
Sbjct: 188 VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFEREL--EQ 245

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           + A+A K      +FV            C  ++          DV   N  +  Y +AGE
Sbjct: 246 VRAYATK------LFV------------CDDDS----------DVTVWNKTLSSYLQAGE 277

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A   F  ++ S    +  T+  ++SV      +E GKQ+HG  V+FG  + +SV N+
Sbjct: 278 GWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANS 337

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
            + MY K G    A RMF  + E +LISW  +ISG  RSG    ++  F++ L  G+  D
Sbjct: 338 AINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPD 397

Query: 361 SSCLATVIDGCSVCSNLE----LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
              + +V+     CS+LE    +G Q+H  A+K G + D  + TAL+D+Y+KGG ++ A 
Sbjct: 398 QFTITSVLRA---CSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAE 454

Query: 417 MLL---DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           +L    DGF     A +NA++ GF   ++D+  + + LFS     G + D +TF+   + 
Sbjct: 455 LLFHNQDGFD---LASWNAMMHGF--TVSDNYREALRLFSLMHERGEKADQITFA---NA 506

Query: 474 SASQACLVR---GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           + +  CLVR   G+ +HA  IK  +  D+ V + ++ MY KCG +  A ++F  I   D 
Sbjct: 507 AKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDD 566

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFN 589
           V+W  ++S    +G  + AL  + +M+  G  PD+ +   +++AC + + L +G     N
Sbjct: 567 VAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHAN 626

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            ++      P +     +VD+  + G + +A  L      + S  LW  ++
Sbjct: 627 IMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMN-TRSVALWNAMI 674



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 152/620 (24%), Positives = 267/620 (43%), Gaps = 72/620 (11%)

Query: 44  CSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLY 103
           CS+S  S      L   W  +++ +I   DL LG+  HA ++ SG   D +  NNLI +Y
Sbjct: 5   CSVSPSS------LLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMY 58

Query: 104 AKFNRLDVAQKLFD--GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFN--- 158
           AK   L  A+KLFD      R  +T+ +++  Y   G+         D+ ++ E F+   
Sbjct: 59  AKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELH-------DVEKTHEAFHIFR 111

Query: 159 ----------EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG 208
                      HT S + + C L       E +  +A+K G + +VFV  +L+++Y    
Sbjct: 112 LLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQ 171

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
             REA  +F  +  +DV   N M+  Y + G  +    +F     S   P+  +   +  
Sbjct: 172 RIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTI-- 229

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
                        L G+  K    RE+    A  T            ++F    + ++  
Sbjct: 230 -------------LMGVGKKTVFERELEQVRAYAT------------KLFVCDDDSDVTV 264

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           W   +S Y+++G G +A++ F + +   + CDS     ++   +  ++LELG Q+HG  +
Sbjct: 265 WNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVV 324

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           + G+   V +  + +++Y K G +  AR +           +N ++SG     +  EE  
Sbjct: 325 RFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCAR--SGLEECS 382

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSAS-QACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
           + LF     +G+ PD  T + +L   +S +     GR +H  ++K G   D  V  ALI 
Sbjct: 383 LRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALID 442

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           +Y+K G ++ A  +F      D+ SWNAM+  + +    + AL LF  M   G   D I+
Sbjct: 443 VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQIT 502

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE-HFACMV-----DLLGRAGRLSEAM 621
                +A        G +    + +QI+ +   +  H+   V     D+  + G +  A 
Sbjct: 503 FANAAKAA-------GCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSAR 555

Query: 622 NLINSSPFSESPLLWRTLVS 641
            + N  P S   + W T++S
Sbjct: 556 KVFNQIP-SPDDVAWTTVIS 574


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 222/684 (32%), Positives = 365/684 (53%), Gaps = 30/684 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL  G+++HA++++SG +  +  AN L+++Y     +  A  LF+ M  R  ++W + I
Sbjct: 142 GDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAI 200

Query: 132 KGYLDDGDYESVLGIACDMYRSEE----KFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
                 GD    LGIA ++++  +    +    T  + L  C+ +      + IH    +
Sbjct: 201 AANAQSGD----LGIALELFQRMQLEGVRPARITLVIALTVCATIRQ---AQAIHFIVRE 253

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
           SG E  + V T+L S Y   G   +A+ VF   A +DV   N M+  Y + G    A  +
Sbjct: 254 SGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALL 313

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +L     P+  T  N  + C     +  G+ +HG A++ G+ R+I +GNA++ MY +
Sbjct: 314 FARMLHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTR 370

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G  EEA  +F  I   N +SW  +I+G  + G   +A+  F      G+    +    +
Sbjct: 371 CGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNL 429

Query: 368 IDGCSVCSNLEL------GLQLHGFAIKHGYLSDVRLGTALVDIYAKGG--DLKSARMLL 419
           ++  +V SN E       G +LH   +  GY S+  +GTA+V +YA  G  D  +A    
Sbjct: 430 LE--AVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQR 487

Query: 420 DGFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                ++    +NAI+S   +      +  +  F +  L G+ P+ +T   +L   A  A
Sbjct: 488 GAMEDRHDVVSWNAIISSLSQH--GHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAML 537
            L  G  +H +   +G  +++ V  AL +MY +CGS++ A +IF+ ++ +RD+V +NAM+
Sbjct: 546 ALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +AY+ +GL   AL LF  M++EG  PD+ S + VL AC + GL++ G  +F  + Q YG+
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P  +H+AC VD+LGRAG L++A  LI       + L+W+TL+   +   +     LA+ 
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            + +L+P D  +++++SN+ AG G  DEAA+VRT M    L KEAG SWIEI S++H FV
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFV 785

Query: 718 ASGKDHPESEEIYSKLDLLNDEMK 741
           A  + HP SEEIY +L+ L+ E++
Sbjct: 786 AGDRSHPRSEEIYRELERLHAEIR 809



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 175/646 (27%), Positives = 314/646 (48%), Gaps = 28/646 (4%)

Query: 63  QLVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
            LV++   +GD +L   G+ +HA ++  G + +    N+L+ LY K   L   +++F  +
Sbjct: 31  HLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRL 88

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            VR   +WT++I  Y + G  +  +G+   M +   + +  T   +L+AC+ L D   G 
Sbjct: 89  EVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGR 148

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            IHA+ ++SG +    +   L+ +Y   GC   A  +F  +  +D+   N  I    ++G
Sbjct: 149 SIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSG 207

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           +  +A  +F  +      P   T    ++VC     + + + +H +  + G+ + + V  
Sbjct: 208 DLGIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVST 264

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+ + Y + G   +A+ +FD  +ER+++SW A++  Y + GH  +A   F   L  GI  
Sbjct: 265 ALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGI-- 322

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
            S    T+++  + CS+L  G  +HG A++ G   D+ LG AL+D+Y + G  + AR L 
Sbjct: 323 -SPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF 381

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA- 478
               C   + +N +++G  +K     +  + LF + +L GM P   T+  LL   AS   
Sbjct: 382 KRIPCNAVS-WNTMIAGSSQK--GQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPE 438

Query: 479 ---CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK--GISDR-DIVS 532
               +  GR LH+  +  GYA++  +G A++ MYA CG+ID A   F+   + DR D+VS
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEI 591
           WNA++S+ + HG GK AL  F  M   G AP+ I+ + VL AC   + L+EG I   ++ 
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEI--VHDH 556

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV--SKLMANS 649
            +  G+   L     +  + GR G L  A  +          +++  +++      +A  
Sbjct: 557 LRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGE 616

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
              +    +     P D  SF+ V +  +  G+ DE  ++  +M  
Sbjct: 617 ALKLFWRMQQEGSRP-DEQSFVSVLSACSHGGLADEGWEIFRSMRQ 661



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           P    RLL  +     L +GR +HA  +  G   +  +GN L+ +Y KC S+    ++F 
Sbjct: 29  PAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFS 86

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG-LSE 582
            +  RD  SW  +++AY  HG  K A+ +F  M++EG   D ++ L VL+AC   G LS+
Sbjct: 87  RLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQ 146

Query: 583 G 583
           G
Sbjct: 147 G 147


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 185/565 (32%), Positives = 309/565 (54%), Gaps = 3/565 (0%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+HA  I +G+    F+   L++MY   G    A  +F  +  +++     MI   ++
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
             +   A   F  +      P  + F++ I  C     +E GKQ+H LA+KFG+  E+ V
Sbjct: 84  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G+ +  MY K G   +A ++F+ +  ++ +SWTA+I GY + G   +A+  F + +D  +
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   L + +  C      + G  +H   +K G+ SD+ +G AL D+Y+K GD++SA  
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263

Query: 418 LLDGFS-CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           +    S C+    +  ++ G++E   +  E  + +F + R  G+EP+  TFS L+   A+
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVE--TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
           QA L +G  LHA  +K  +  D  V + L+ MY KCG ++ A Q F  I D   ++WN++
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSL 381

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S +  HGLGK A+ +FE M   G  P+ I+ + +L  C ++GL E G+  F  +++ YG
Sbjct: 382 VSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P  EH++C++DLLGRAGRL EA   IN  PF  +   W + +   ++  + +   LA+
Sbjct: 442 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAA 501

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           ++L+ LEPK++G+ +L+SN+YA +   ++   VR  M D  + K  G SW+++  K H F
Sbjct: 502 EKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVF 561

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
            A    HP    IY KLD L D++K
Sbjct: 562 GAEDWSHPRKSAIYEKLDTLLDQIK 586



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 236/492 (47%), Gaps = 11/492 (2%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           N    +++    +  L+ G+ +HA L+ +G    TF  N+L+N+Y+K   LD A KLFD 
Sbjct: 6   NALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDT 65

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R+ ++WT++I G   +  +   +   C M    E   +   S  + AC+ L     G
Sbjct: 66  MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q+H  A+K G  + +FVG++L  MY   G   +A  VF  +  KD      MI  Y+K 
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           GE E A   F  ++  +   + +   + +  C      + G+ +H   VK G   +I VG
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 299 NAIVTMYGKHGMSEEAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           NA+  MY K G  E A  +F   SE RN++S+T LI GYV +    K ++ F+E    GI
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +    +++I  C+  + LE G QLH   +K  +  D  + + LVD+Y K G L+ A  
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 365

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
             D         +N+++S F +      +D + +F +    G++P+ +TF  LL+   S 
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLG--KDAIKIFERMVDRGVKPNAITFISLLT-GCSH 422

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVG----NALITMYAKCGSIDGAFQIFKGIS-DRDIVS 532
           A LV     + YS+   Y   V+ G    + +I +  + G +  A +    +  + +   
Sbjct: 423 AGLVEEGLDYFYSMDKTYG--VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG 480

Query: 533 WNAMLSAYALHG 544
           W + L A  +HG
Sbjct: 481 WCSFLGACRIHG 492



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 215/427 (50%), Gaps = 8/427 (1%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
             +VI    +   +  GKQLH L +  G      + N +V MY K G  + A ++FD + 
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           +RNL+SWTA+ISG  ++    +AI  F      G        ++ I  C+   ++E+G Q
Sbjct: 68  QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 127

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H  A+K G  S++ +G+ L D+Y+K G +  A  + +   CK    + A++ G+  KI 
Sbjct: 128 MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY-SKIG 186

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           + EE ++               V  S L +  A +AC   GRS+H+  +K G+ +D+ VG
Sbjct: 187 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF-GRSVHSSVVKLGFESDIFVG 245

Query: 503 NALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
           NAL  MY+K G ++ A  +F   S+ R++VS+  ++  Y      +  L +F E++R+G 
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQI-YGLRPILEHFACMVDLLGRAGRLSEA 620
            P++ +   +++AC      E G  L  ++ +I +   P +   + +VD+ G+ G L +A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQA 363

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK-DAGSFILVSNMYAG 679
           +   +      + + W +LVSV       K +I   +R++D   K +A +FI +    + 
Sbjct: 364 IQAFDEIG-DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 422

Query: 680 QGMLDEA 686
            G+++E 
Sbjct: 423 AGLVEEG 429



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 6/353 (1%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D++ LA VI   +    L  G QLH   I  GY     L   LV++Y+K G+L  A  L 
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    +    + A++SG  +     E   +  F   R+ G  P    FS  +   AS   
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSE--AIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           +  G+ +H  ++K G  +++ VG+ L  MY+KCG++  A ++F+ +  +D VSW AM+  
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y+  G  + ALL F++M  E    D   +   L AC      + G  + + + ++ G   
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL-GFES 240

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASK 657
            +     + D+  +AG +  A N+        + + +  L+   V         S+    
Sbjct: 241 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVEL 300

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
           R   +EP +  +F  +    A Q  L++  ++   +  +   ++   S I +D
Sbjct: 301 RRQGIEPNEF-TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVD 352


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 213/637 (33%), Positives = 346/637 (54%), Gaps = 15/637 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ V A ++K G++ D F    +++LYAK   +  A ++F  +   S ++WT ++ G
Sbjct: 267 LRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y    D  S L I  +M  S  + N  T + ++ AC          Q+HA+  KSGF  +
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVR---CVNFMILEYNKAGESEMAFHVFVH 250
             V  +LISMY  SG    +E VF  L   D++    VN MI  ++++ +   A  +F  
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQVFEDL--DDIQRQNIVNVMITSFSQSKKPGKAIRLFTR 443

Query: 251 LLSSDFEPNDYTFTNVISV--CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +L      ++++  +++SV  C  NLG    KQ+HG  +K G+V +++VG+++ T+Y K 
Sbjct: 444 MLQEGLRTDEFSVCSLLSVLDCL-NLG----KQVHGYTLKSGLVLDLTVGSSLFTLYSKC 498

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  EE+ ++F  I  ++   W ++ISG+   G+  +AI  F E LD G   D S LA V+
Sbjct: 499 GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVL 558

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS   +L  G ++HG+ ++ G    + LG+ALV++Y+K G LK AR + D        
Sbjct: 559 TVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPV 618

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
             ++++SG+ +      +D  +LF    ++G   D    S +L  +A       G  +HA
Sbjct: 619 SCSSLISGYSQH--GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y  K G   +  VG++L+TMY+K GSID   + F  I+  D+++W A++++YA HG    
Sbjct: 677 YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANE 736

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL ++  MK +GF PD ++ +GVL AC + GL E      N + + YG+ P   H+ CMV
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMV 796

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           D LGR+GRL EA + IN+       L+W TL++  K+    +   +A+K+ ++LEP DAG
Sbjct: 797 DALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAG 856

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
           ++I +SN+ A  G  DE  + R  M    + KE G S
Sbjct: 857 AYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 241/485 (49%), Gaps = 7/485 (1%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D F   +L++ Y+    +  A KLFD +     ++   +I GY     +E  L     M+
Sbjct: 83  DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
               + NE +   ++ ACS L+  +F E +    IK G+     V ++LI ++  +  F 
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           +A  VFR     +V C N +I    +       F +F  +     +P+ YT+++V++ C 
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
               +  GK +    +K G   ++ V  AIV +Y K G   EA  +F  I   +++SWT 
Sbjct: 263 SLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           ++SGY +S     A+  F E    G+  ++  + +VI  C   S +    Q+H +  K G
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381

Query: 392 YLSDVRLGTALVDIYAKGGDLK-SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           +  D  +  AL+ +Y+K GD+  S ++  D    +     N +++ F +  +      + 
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQ--SKKPGKAIR 439

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           LF++    G+  D  +   LLS+     CL  G+ +H Y++K+G   D+ VG++L T+Y+
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCGS++ ++++F+GI  +D   W +M+S +  +G  + A+ LF EM  +G +PD+ ++  
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556

Query: 571 VLQAC 575
           VL  C
Sbjct: 557 VLTVC 561



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 16/229 (6%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K +  S +  LG  VHA++ K G   +    ++L+ +Y+KF  +D   K F  +    
Sbjct: 658 ILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIF--G 178
            I WT+LI  Y   G     L +   M     K ++ T   +L ACS   L+E+  F   
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +  + I+   EN  +V   ++     SG  REAE+    +  K    V   +L   K 
Sbjct: 778 SMVKDYGIEP--ENRHYV--CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833

Query: 239 -GESEMAFHVFVHLLSSDFEPND----YTFTNVISVCYENLGVEEGKQL 282
            GE E+        +  + EP+D     + +N+++   E   VEE ++L
Sbjct: 834 HGEVELGKVAAKKAI--ELEPSDAGAYISLSNILAEVGEWDEVEETRKL 880


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 207/671 (30%), Positives = 355/671 (52%), Gaps = 3/671 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT-WTS 129
           S   K G+ +H++++++    D F    LI+ Y K  R   A+ LF  +  RS I  W  
Sbjct: 152 SSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNV 211

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G+ ++G +E+ L           K    + +  L AC   E   FG+Q+H  AIK G
Sbjct: 212 MIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVG 271

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           FE++ +V TSL++MY        AE VF  +  K++   N +I  Y   G +  A  ++ 
Sbjct: 272 FEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYK 331

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +       + +T  NV++        + G+ +H   VK  +   I++ +A++TMY K G
Sbjct: 332 QMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFG 391

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            S  A  +F  + ER++++W ++ISG+ ++    +A++ F       +  DS  +A++I 
Sbjct: 392 DSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIIS 451

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+    ++LG  +HGF IK G   DV + ++L+D+Y+K G  + A  +      K    
Sbjct: 452 ACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVA 511

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N+I+S +      D    + LFSQ     + PD V+F+ +L+  +S A L++G+S+H Y
Sbjct: 512 WNSIISCYCRNNLPDLS--INLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGY 569

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            ++     D+ V N LI MY KCG +  A  IF+ IS++++V+WN+M+  Y  HG    A
Sbjct: 570 LVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKA 629

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           + LF+EM+  G  PDD++ L +L +C +SGL E G+ LF  ++  +G+ P +EH+  +VD
Sbjct: 630 IELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVD 689

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           L GRAG L +A + + + P      +W +L+   K+  N +   + + +LL++EP    +
Sbjct: 690 LYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSN 749

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++ + N+Y    + D  A +R +M +  L K  GCSWIE+ +K+  F +     P + EI
Sbjct: 750 YVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEI 809

Query: 730 YSKLDLLNDEM 740
           Y  L  L   M
Sbjct: 810 YDTLSSLKRNM 820



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 251/520 (48%), Gaps = 28/520 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD--- 117
           +P L+K      +L+ G+ +H+ ++ +G  +D +  ++LIN+Y K      A K+FD   
Sbjct: 56  YPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLP 115

Query: 118 --GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
             G+ V     W S+I GY   G  E   G+         +F     S   E        
Sbjct: 116 KSGVSVDDVTIWNSIIDGYFRFGQLEE--GMV--------QFGRMQSSGYKE-------- 157

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILE 234
             G+QIH++ +++    + F+ T+LI  YF  G   EA  +F+ L  + ++   N MI  
Sbjct: 158 --GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGG 215

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
           + + G  E +   ++   + + +    +FT  +S C +   V  GKQ+H  A+K G   +
Sbjct: 216 FGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDD 275

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
             V  +++TMYGK  M E AE++F+ + ++ +  W ALIS YV +G+   A+  + +   
Sbjct: 276 PYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKL 335

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             +  DS  +  V+   S+    +LG  +H   +K    S + + +AL+ +Y+K GD   
Sbjct: 336 CTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNY 395

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A  +      +    + +++SGF +      ++ +  F       ++PD    + ++S  
Sbjct: 396 ANSIFSTMKERDVVAWGSVISGFCQN--RKYKEALDFFRAMEADLVKPDSDIMASIISAC 453

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
                +  G ++H + IK+G   DV V ++L+ MY+K G  + A  IF  +  +++V+WN
Sbjct: 454 TGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWN 513

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +++S Y  + L   ++ LF ++ R    PD +S   VL A
Sbjct: 514 SIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAA 553



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 228/484 (47%), Gaps = 32/484 (6%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF-----RG 219
           +L+AC+ L +  +G+ IH+  I +G  ++ ++ +SLI++Y   G F +A  VF      G
Sbjct: 59  LLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSG 118

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           ++  DV   N +I  Y + G+ E     F  + SS                    G +EG
Sbjct: 119 VSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSS--------------------GYKEG 158

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER-NLISWTALISGYVR 338
           KQ+H   V+  +  +  +  A++  Y K G   EA  +F  + +R N+++W  +I G+  
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGE 218

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G    ++  +L      +   SS     +  C     +  G Q+H  AIK G+  D  +
Sbjct: 219 NGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYV 278

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
            T+L+ +Y K   ++SA  + +    K    +NA++S ++        D + ++ Q +L 
Sbjct: 279 HTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGN--GYAYDALRIYKQMKLC 336

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
            +  D  T   +L+ S+       GR +H   +K    + + + +AL+TMY+K G  + A
Sbjct: 337 TVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYA 396

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             IF  + +RD+V+W +++S +  +   K AL  F  M+ +   PD   +  ++ AC  +
Sbjct: 397 NSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISAC--T 454

Query: 579 GLSEGGI-CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           GL +  + C  +      GL+  +   + ++D+  + G    A N+ +  P  ++ + W 
Sbjct: 455 GLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPL-KNLVAWN 513

Query: 638 TLVS 641
           +++S
Sbjct: 514 SIIS 517



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++    G   + LG  +H F++KSG Q D F A++L+++Y+KF   + A  +F  M +++
Sbjct: 449 IISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKN 508

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W S+I  Y  +   +  + +   + R++   +  + + +L A S +   + G+ +H 
Sbjct: 509 LVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHG 568

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           + ++     ++ V  +LI MY   G  + A+++F  ++ K++   N MI  Y   GE   
Sbjct: 569 YLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSK 628

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIV 302
           A  +F  + SS  +P+D TF +++S C  +  +EEG  L   + +KFG+   +     IV
Sbjct: 629 AIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIV 688

Query: 303 TMYGKHG 309
            +YG+ G
Sbjct: 689 DLYGRAG 695



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 26/180 (14%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF--- 522
           T+  LL   AS + L  G+++H+  I TG  +D  + ++LI +Y KCG+   A ++F   
Sbjct: 55  TYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQL 114

Query: 523 --KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
              G+S  D+  WN+++  Y   G  +  ++ F  M+  G+                   
Sbjct: 115 PKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGY------------------- 155

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            EG       +  +    P LE    ++D   + GR +EA  L        + + W  ++
Sbjct: 156 KEGKQIHSYIVRNMLNFDPFLE--TALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMI 213


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 180/533 (33%), Positives = 313/533 (58%), Gaps = 6/533 (1%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF  +  +++     MI  + + G +  A  +F+ +  S + P+ +T+++V+S C E
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK---HGMSEEAERMFDAISERNLISW 329
              +  GKQLH   ++ G+  ++ VG ++V MY K    G  +++ ++F+ + E N++SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 330 TALISGYVRSGHGGK-AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           TA+I+ Y +SG   K AI  F + +   I  +    ++V+  C   S+   G Q++ +A+
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           K G  S   +G +L+ +YA+ G ++ AR   D    K    +NAI+ G+ + +    E+ 
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL--KSEEA 246

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
            +LF++    G+     TF+ LLS +AS   + +G  +H   +K GY ++  + NALI+M
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           Y++CG+I+ AFQ+F  + DR+++SW +M++ +A HG    AL +F +M   G  P++I+ 
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
           + VL AC + G+   G   FN + + +G+ P +EH+ACMVDLLGR+G L EAM  INS P
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426

Query: 629 FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAK 688
                L+WRTL+   ++  N++    A++ +L+ EP D  ++IL+SN++A  G   +  K
Sbjct: 427 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 486

Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +R +M +  L KEAGCSWIE+++++H F      HP++ +IY +LD L  ++K
Sbjct: 487 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 539



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 224/463 (48%), Gaps = 16/463 (3%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           A K+FD M  R+ +TWT +I  +   G     + +  DM  S    +  T S +L AC+ 
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH---SGCFREAENVFRGLAYKDVRCV 228
           L     G+Q+H+  I+ G   +V VG SL+ MY      G   ++  VF  +   +V   
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 229 NFMILEYNKAGESEM-AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
             +I  Y ++GE +  A  +F  ++S    PN ++F++V+  C        G+Q++  AV
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           K G+     VGN++++MY + G  E+A + FD + E+NL+S+ A++ GY ++    +A  
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
            F E  D GI   +   A+++ G +    +  G Q+HG  +K GY S+  +  AL+ +Y+
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           + G++++A  + +    +    + ++++GF +         + +F +    G +P+ +T+
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKH--GFATRALEMFHKMLETGTKPNEITY 366

Query: 468 SRLLSLSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
             +LS  +    +  G +  ++   + G    +     ++ +  + G +  A +    + 
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426

Query: 527 -DRDIVSWNAMLSAYALHG---LGKGALLLFEEMKREGFAPDD 565
              D + W  +L A  +HG   LG+ A  +  E +     PDD
Sbjct: 427 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQE-----PDD 464



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 182/349 (52%), Gaps = 5/349 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF---NRLDVAQKLFDGMLVRSAITWT 128
           G L LG+ +H+ +++ G   D     +L+++YAK      +D ++K+F+ M   + ++WT
Sbjct: 70  GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 129

Query: 129 SLIKGYLDDGDYES-VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
           ++I  Y   G+ +   + + C M     + N  + S +L+AC  L D   GEQ++++A+K
Sbjct: 130 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK 189

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G  +   VG SLISMY  SG   +A   F  L  K++   N ++  Y K  +SE AF +
Sbjct: 190 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 249

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +  +    + +TF +++S       + +G+Q+HG  +K G      + NA+++MY +
Sbjct: 250 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 309

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G  E A ++F+ + +RN+ISWT++I+G+ + G   +A+  F + L+ G   +      V
Sbjct: 310 CGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAV 369

Query: 368 IDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           +  CS    +  G +  +    +HG +  +     +VD+  + G L  A
Sbjct: 370 LSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 418


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 208/711 (29%), Positives = 385/711 (54%), Gaps = 34/711 (4%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLK--SGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           +P ++K   G  +L LG+ +HA + K   GS +     N L+N+Y K   L  A K+FD 
Sbjct: 13  FPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDR 72

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR--- 175
           +  R  ++W S+I       ++E  +     M     + +  T   +  ACS L  R   
Sbjct: 73  ITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGL 132

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G+QIH    + G     F   +L++MY   G   +A+++      +D+   N MI  +
Sbjct: 133 WLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSF 191

Query: 236 NKAGESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
           ++  E  M   +F+ L+  +  +P+  TF +V+  C     +  GK++H  A++   V E
Sbjct: 192 SQ-NERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIE 250

Query: 295 IS-VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF- 352
            S VG+A+V MY   G  E    +FD++ +R +  W A+I+GY +S H  KA+  F+E  
Sbjct: 251 NSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEME 310

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
              G+  +++ +++++     C  +     +HG+ IK G  ++  L  AL+D+Y++ GD+
Sbjct: 311 AAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDI 370

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL----------------FSQQR 456
           K+++ + D    +    +N I++ ++  I     D ++L                ++ ++
Sbjct: 371 KTSKRIFDSMEDRDIVSWNTIITSYV--ICGRSSDALLLLHEMQRIEEKSTYDGDYNDEK 428

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
               +P+ +T   +L   AS + L +G+ +HAY+I+   A+ V VG+AL+ MYAKCG ++
Sbjct: 429 QVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLN 488

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-----FAPDDISILGV 571
            A ++F  +  R++++WN ++ AY +HG GK +L LFE+M  EG       P +++ + +
Sbjct: 489 LARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIAL 548

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
             +C +SG+ + G+ LF++++  +G+ P  +H+AC+VDL+GRAG++ EA  L+N+ P   
Sbjct: 549 FASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGF 608

Query: 632 SPL-LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
             +  W +L+   ++  N +   +A++ LL L+P  A  ++L+SN+Y+  G+ D+A  +R
Sbjct: 609 DKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLR 668

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             M  + + KE GCSWIE   ++H F+A    HP+SE+++  L+ L++ +K
Sbjct: 669 RRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLK 719



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 29/301 (9%)

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY--LSDVRLGTALVDIYAKGGDLK 413
           G   D+     V+   +    L LG Q+H    K GY   S V +   LV++Y K G L 
Sbjct: 5   GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            A  + D  + +    +N+I+S       ++ E  +  F    + G EP   T      +
Sbjct: 65  DAYKVFDRITERDQVSWNSIISALCR--FEEWEVAIKAFRLMLMEGFEPSSFTL-----V 117

Query: 474 SASQAC--------LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           S + AC        L  G+ +H    + G+       NAL+ MYAK G +D A  +    
Sbjct: 118 SMALACSNLRKRDGLWLGKQIHGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLF 176

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
            DRD+V+WN+M+S+++ +     AL+    M  EG  PD ++   VL AC +  L   G 
Sbjct: 177 EDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTG- 235

Query: 586 CLFNEIEQIYGLRP--ILEHF---ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
               EI   Y LR   ++E+    + +VD+    G++ E+  L+  S       LW  ++
Sbjct: 236 ---KEI-HAYALRTDDVIENSFVGSALVDMYCNCGQV-ESGRLVFDSVLDRKIGLWNAMI 290

Query: 641 S 641
           +
Sbjct: 291 A 291



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 23/218 (10%)

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA--ADVIVGNALITMYAKCGSI 515
           +G  PD   F  +L   A    L  G+ +HA+  K GY   + V + N L+ MY KCG +
Sbjct: 4   SGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGL 63

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             A+++F  I++RD VSWN+++SA       + A+  F  M  EGF P   +++ +  AC
Sbjct: 64  GDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALAC 123

Query: 576 --------IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
                   ++ G    G C      + +    ++  +A       + GRL +A +L+   
Sbjct: 124 SNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYA-------KLGRLDDAKSLL--V 174

Query: 628 PFSESPLL-WRTLVSVSKLMANSKF-SILASKRLLDLE 663
            F +  L+ W ++  +S    N +F   L   RL+ LE
Sbjct: 175 LFEDRDLVTWNSM--ISSFSQNERFMEALMFLRLMVLE 210


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 204/699 (29%), Positives = 371/699 (53%), Gaps = 21/699 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYAKFNRLDVAQKLFDGM 119
           +P L+K      D+ LG+ +HA + K G   D+   AN L+NLY K        K+FD +
Sbjct: 96  FPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 155

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRI 176
             R+ ++W SLI        +E  L     M   + + +  T   +  ACS   + E  +
Sbjct: 156 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLL 215

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+Q+HA+ ++ G E N F+  +L++MY   G    ++ +      +D+   N ++    
Sbjct: 216 MGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLC 274

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           +  +   A      ++    EP+ +T ++V+  C     +  GK+LH  A+K G + E S
Sbjct: 275 QNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 334

Query: 297 -VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD- 354
            VG+A+V MY          R+FD + +R +  W A+I+GY ++ +  +A+  F+E  + 
Sbjct: 335 FVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEES 394

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G+  +S+ +A V+  C           +HGF +K G   D  +  AL+D+Y++ G +  
Sbjct: 395 AGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDI 454

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL-----------AGMEPD 463
           A+ +      +    +N I++G++   ++  ED +++  + ++             ++P+
Sbjct: 455 AKRIFGKMEDRDLVTWNTIITGYV--FSERHEDALLMLHKMQILERKASERASRVSLKPN 512

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
            +T   +L   A+ + L +G+ +HAY+IK   A DV VG+AL+ MYAKCG +  + ++F 
Sbjct: 513 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 572

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            I  R++++WN ++ AY +HG  + A+ +   M  +G  P++++ + V  AC +SG+   
Sbjct: 573 QIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNE 632

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS-ESPLLWRTLVSV 642
           G+ +F  +++ YG+ P  +H+AC+VDLLGRAGR+ EA  LIN  P + +    W +L+  
Sbjct: 633 GLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGA 692

Query: 643 SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
            ++  N +   +A++ L+ LEP  A  ++L++N+Y+  G+  +A +VR  M    + KE 
Sbjct: 693 CRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEP 752

Query: 703 GCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           GCSWIE   ++H FVA    HP+SE++   L+ L + M+
Sbjct: 753 GCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMR 791



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 181/360 (50%), Gaps = 16/360 (4%)

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIV 302
           A   ++ ++    +P+++ F  ++    +   ++ GKQ+H    KFG  V  ++V N +V
Sbjct: 77  AVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLV 136

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +Y K G      ++FD ISERN +SW +LIS          A+  F   LD  +   S 
Sbjct: 137 NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSF 196

Query: 363 CLATVIDGCS---VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
            L +V   CS   +   L +G Q+H + ++ G L+   + T LV +Y K G L S+++LL
Sbjct: 197 TLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINT-LVAMYGKMGKLASSKVLL 255

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
             F  +    +N +LS   +   +   + +    +  L G+EPD  T S +L   +    
Sbjct: 256 GSFEGRDLVTWNTVLSSLCQN--EQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEM 313

Query: 480 LVRGRSLHAYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
           L  G+ LHAY++K G    +  VG+AL+ MY  C  +    ++F G+ DR I  WNAM++
Sbjct: 314 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMIT 373

Query: 539 AYALHGLGKGALLLFEEMKRE-GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            YA +   + ALLLF EM+   G   +  ++ GV+ AC+ SG        F++ E I+G 
Sbjct: 374 GYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSG-------AFSKKEAIHGF 426



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 17/256 (6%)

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           W  L+   VRS    +A+  +++ + LGI  D+     ++   +   +++LG Q+H    
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 389 KHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           K GY  D V +   LV++Y K GD  +   + D  S +    +N+++S     +   E+ 
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS----LCSFEKW 176

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC--------LVRGRSLHAYSIKTGYAADV 499
            M L + + +   + +P +F+    +S + AC        L+ G+ +HAY ++ G     
Sbjct: 177 EMALEAFRCMLDEDVEPSSFTL---VSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSF 233

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
           I+ N L+ MY K G +  +  +      RD+V+WN +LS+   +     AL    EM  E
Sbjct: 234 II-NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLE 292

Query: 560 GFAPDDISILGVLQAC 575
           G  PD  +I  VL AC
Sbjct: 293 GVEPDGFTISSVLPAC 308


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 212/712 (29%), Positives = 375/712 (52%), Gaps = 17/712 (2%)

Query: 49  VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           +SC++ T+       ++   +   +  LG  V   ++K G + +   AN+LI+++  F  
Sbjct: 127 MSCNDNTM-----SSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGS 181

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           ++ A  +F GM     I+W S+I  Y+ +G  +  L     M+R  ++ N  T S +L  
Sbjct: 182 VEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAG 241

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C  +++  +G  IH+  +K G+ +NV    +LI+MY  +G   +AE VF+G+  KD+   
Sbjct: 242 CGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISW 301

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N M+  Y + G    A  +   +       N  TFT+ ++ C +     EGK LH L + 
Sbjct: 302 NSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIH 361

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G+   + VGNA+VT+Y K G+  EA+++F  + +R+ ++W ALI G+  S    +A+  
Sbjct: 362 VGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKA 421

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
           F    + G+  +   ++ V+  C   ++L E G+ +H F I  G+ SD  +  +L+ +YA
Sbjct: 422 FKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYA 481

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           K GDL S+  + D  + K  + +NA+++          E+ +    + R AG+  D  +F
Sbjct: 482 KCGDLNSSNNIFDRLTSKNASAWNAMMAANAHH--GHMEEALKFLLEMRRAGVNVDEFSF 539

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           S  L+ +A  A L  G+ LH  ++K G  ++  V +A + MY KCG ID   +I     +
Sbjct: 540 SECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPIN 599

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
           R  +SWN + S+++ HG  + A   F EM   G  PD ++ + +L AC + G+ E G+  
Sbjct: 600 RSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAY 659

Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           ++ + + +G+   + H  C++DLLGR+GR +EA   I   P S +  +WR+L++  K   
Sbjct: 660 YDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHG 719

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           N +    A + LL L+P D  +++L SN+ A  G  ++  K+R  M   ++ K+  CSW+
Sbjct: 720 NLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWV 779

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSS-----AFELQD 754
           ++ +KL  F      HP++ EIY+KL    +E+K  +K++      ++ LQD
Sbjct: 780 KLKNKLSLFGMGDHSHPQASEIYAKL----EELKKMIKEAGYIPDISYALQD 827



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 165/574 (28%), Positives = 279/574 (48%), Gaps = 21/574 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH F++K G  +D F   +L++LY  +     A K+F  M+ ++ ++WT+L+  Y+D
Sbjct: 49  GVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVD 108

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G+   V+ I   M       N++T S ++  C  LE+ + G Q+    IK G E NV V
Sbjct: 109 YGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSV 168

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLISM+ + G   EA  VF G+   D    N MI  Y + G  + +   F  +     
Sbjct: 169 ANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHK 228

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E N  T + +++ C     ++ G+ +H L +KFG    +   N ++TMY   G  E+AE 
Sbjct: 229 EINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAEL 288

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  + E+++ISW ++++ Y + G+   A+        +    +     + +  CS    
Sbjct: 289 VFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEF 348

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
              G  LH   I  G   +V +G ALV +YAK G +  A+ +      +    +NA++ G
Sbjct: 349 ATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGG 408

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS-ASQACLVRGRSLHAYSIKTGY 495
             +  +++ ++ +  F   R  G+  + +T S +L    A    L  G  +HA+ I TG+
Sbjct: 409 HAD--SEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGF 466

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +D  V N+LITMYAKCG ++ +  IF  ++ ++  +WNAM++A A HG  + AL    E
Sbjct: 467 QSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLE 526

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL--------RPILEHFACM 607
           M+R G   D+ S    L A     + E G       +Q++GL         P +   +  
Sbjct: 527 MRRAGVNVDEFSFSECLAAAAKLAILEEG-------QQLHGLAVKLGCDSNPFVA--SAT 577

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +D+ G+ G + + + +I   P + S L W  L S
Sbjct: 578 MDMYGKCGEIDDVLRII-PRPINRSRLSWNILTS 610



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 233/449 (51%), Gaps = 7/449 (1%)

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF-GEQIHAFAIKSG 189
           + G++  G Y   +    +M     K +    + ++ AC   E  +  G Q+H F +K G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             ++VFVGTSL+ +Y + G   +A  VF+ + YK+V     +++ Y   GE  M  +++ 
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            + S     ND T ++VIS C        G Q+ G  +K+G+   +SV N++++M+G  G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             EEA  +F  + E + ISW ++I+ Y+R+G   +++  F     +    +S+ L+T++ 
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           GC    NL+ G  +H   +K G+ S+V     L+ +Y+  G  + A ++  G   K    
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMIS 300

Query: 430 FNAILSGFME--KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
           +N++++ + +     D  + +  +F  +R A    + VTF+  L+  +       G+ LH
Sbjct: 301 WNSMMACYAQDGNCLDALKLLATMFYMRRGA----NYVTFTSALAACSDPEFATEGKILH 356

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           A  I  G   +VIVGNAL+T+YAK G +  A ++F+ +  RD V+WNA++  +A      
Sbjct: 357 ALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPD 416

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACI 576
            AL  F+ M+ EG   + I+I  VL AC+
Sbjct: 417 EALKAFKLMREEGVPINYITISNVLGACL 445


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 193/587 (32%), Positives = 325/587 (55%), Gaps = 42/587 (7%)

Query: 186 IKSGFENNVFVGTSLI-----SMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IK G  N  +  + L+     + YFH   +  A +VF+ +   +    N MI  +  + +
Sbjct: 1   IKIGLHNTNYALSKLLDFCILTPYFHGLPY--AISVFKSIQEPNQLSWNTMIRGHALSSD 58

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A +++V+++S    PN YTF  +   C ++   +EGKQ+H   +K+G+  ++ V  +
Sbjct: 59  PISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTS 118

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA--------------- 345
           +++MY ++G+ E+A ++FD  S R+++S+TA+I+GY   G+  KA               
Sbjct: 119 LISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSW 178

Query: 346 ---ING-------------FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
              I+G             F E + + +  D S +ATV+  C+   N+ELG Q+H +   
Sbjct: 179 NAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDN 238

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
           HG+ S+++L  AL+D+Y+K G+++ A  L +G   K    +N ++ G+     +  ++ +
Sbjct: 239 HGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGY--AYINHHKEAL 296

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT--GYAADVIVGNALIT 507
           ++F +    G  P+ VT   +L   A    +  GR +H Y  K   G   +  +  +LI 
Sbjct: 297 LVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLID 356

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MYAKCG+I+ A Q+F  I ++ + S NAM+  +A+HG    A  L   MK++G  PDDI+
Sbjct: 357 MYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDIT 416

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            +G+L AC ++GLS+ G  +F  +   Y + P LEH+ CM+DLLGR+G   EA  LINS 
Sbjct: 417 FVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSM 476

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
                 ++W +L+   K+  N +   L +++L+ +EPK+ GS++L+SN+YA     D+ A
Sbjct: 477 TMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVA 536

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           +VRT +ND  L K  GCS IEIDS +H F+   K HP+++EIY  L+
Sbjct: 537 RVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLE 583



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 245/531 (46%), Gaps = 45/531 (8%)

Query: 85  LKSGSQNDTFEANNLIN---LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYE 141
           +K G  N  +  + L++   L   F+ L  A  +F  +   + ++W ++I+G+    D  
Sbjct: 1   IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60

Query: 142 SVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI 201
           S L +   M       N +T   + ++C+  +    G+QIHA  +K G   ++ V TSLI
Sbjct: 61  SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLI 120

Query: 202 SMYFHSGCFREAENVF--------------------RG-----------LAYKDVRCVNF 230
           SMY  +G   +A  VF                    RG           +  KDV   N 
Sbjct: 121 SMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
           MI  Y + G  + A  +F  ++  D +P++ T   V+S C  +  VE G+Q+H      G
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG 240

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
               + + NA++ +Y K G  E A  +F+ +  +++ISW  LI GY    H  +A+  F 
Sbjct: 241 FGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQ 300

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK--HGYLSDVRLGTALVDIYAK 408
           E L LG   +   + +++  C+    +++G  +H +  K   G +++  L T+L+D+YAK
Sbjct: 301 EMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAK 360

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
            G++++A  + D    K  +  NA++ GF M   AD   D   L S+ +  G+EPD +TF
Sbjct: 361 CGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFD---LLSRMKKDGIEPDDITF 417

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGI 525
             LLS  +       GR +   S+   Y  +  + +   +I +  + G    A ++   +
Sbjct: 418 VGLLSACSHAGLSDLGRKIFK-SMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSM 476

Query: 526 S-DRDIVSWNAMLSAYALH-GLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           + + D V W ++L A  +H  L  G L+  + MK E   P    +L  + A
Sbjct: 477 TMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYA 527



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 187/411 (45%), Gaps = 12/411 (2%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           +  + S  D      +I  YA    +D AQK+FD + ++  ++W ++I GY + G Y+  
Sbjct: 135 VFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEA 194

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
           L +  +M + + K +E T + +L  C+   +   G QIH++    GF +N+ +  +LI +
Sbjct: 195 LELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDL 254

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y   G    A  +F GL YKDV   N +I  Y      + A  VF  +L     PND T 
Sbjct: 255 YSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTM 314

Query: 264 TNVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
            +++  C     ++ G+ +H    K   G++   S+  +++ MY K G  E A ++FD I
Sbjct: 315 LSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTI 374

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
             ++L S  A+I G+   G    A +        GI  D      ++  CS     +LG 
Sbjct: 375 LNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGR 434

Query: 382 QL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
           ++     + +     +     ++D+  + G  K A  L++      T E + ++ G + K
Sbjct: 435 KIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSM----TMEPDGVIWGSLLK 490

Query: 441 IADDEEDVMV-LFSQQRLAGMEP-DP---VTFSRLLSLSASQACLVRGRSL 486
                +++ +     Q+L  +EP +P   V  S + + SA    + R R+L
Sbjct: 491 ACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTL 541



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 134/269 (49%), Gaps = 4/269 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG+++LG+ +H+++   G  ++    N LI+LY+K   ++ A  LF+G+  +  I+W +L
Sbjct: 223 SGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTL 282

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK--S 188
           I GY     ++  L +  +M +  E  N+ T   IL AC+ L     G  IH +  K   
Sbjct: 283 IGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLK 342

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G   N  + TSLI MY   G    A  VF  +  K +   N MI  +   G ++ AF + 
Sbjct: 343 GIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLL 402

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGK 307
             +     EP+D TF  ++S C      + G+++   + + + +  ++     ++ + G+
Sbjct: 403 SRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGR 462

Query: 308 HGMSEEAERMFDAIS-ERNLISWTALISG 335
            G+ +EAE + ++++ E + + W +L+  
Sbjct: 463 SGLFKEAEELINSMTMEPDGVIWGSLLKA 491


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 215/681 (31%), Positives = 345/681 (50%), Gaps = 59/681 (8%)

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W SLI+ Y ++G     L   C M+      + +T   + +AC  +     G+  HA + 
Sbjct: 95  WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
            +GF +NVFVG +L++MY   G   +A  VF  +   DV   N +I  Y K G+ +MA  
Sbjct: 155 VTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALE 214

Query: 247 VFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           +F  + +   F P+D T  NV+  C        GKQ HG AV   +++ + VGN +V MY
Sbjct: 215 MFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMY 274

Query: 306 GKHGMSEEAE-------------------------------RMFDAISER----NLISWT 330
            K GM +EA                                R+F+ + E     ++++W+
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWS 334

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           A ISGY + G G +A+    + L  GI  +   L +V+ GC+    L  G ++H +AIK+
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394

Query: 391 -------GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY--TAEFNAILSGFMEKI 441
                  G+  +  +   L+D+YAK   +  AR + D  S K      +  ++ G+ +  
Sbjct: 395 PMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQH- 453

Query: 442 ADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-AAD 498
             D    + L S+  +      P+  T S  L   AS A L  G+ +HAY+++    A  
Sbjct: 454 -GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVP 512

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           + V N LI MYAKCG I  A  +F  + +++ V+W ++++ Y +HG G+ AL +FEEM+R
Sbjct: 513 LFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRR 572

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS 618
            GF  D +++L VL AC +SG+ + G+  FN ++  +G+ P  EH+AC+VDLLGRAGRL+
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLN 632

Query: 619 EAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
            A+ LI   P    P++W  L+S  ++    +    A+K++ +L   + GS+ L+SNMYA
Sbjct: 633 AALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYA 692

Query: 679 GQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLND 738
             G   +  ++R+ M    + K  GCSW+E       F    K HP ++EIY    +L+D
Sbjct: 693 NAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY---QVLSD 749

Query: 739 EMKLKVKD-----SSAFELQD 754
            M+ ++KD      + F L D
Sbjct: 750 HMQ-RIKDIGYVPETGFALHD 769



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/570 (24%), Positives = 259/570 (45%), Gaps = 61/570 (10%)

Query: 29  INTFSPNPKSQ--VAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLK 86
           I ++  N ++   ++  C + S+S +     F   P + K       ++ G + HA    
Sbjct: 99  IRSYGNNGRANKCLSSFCLMHSLSWTPDNYTF---PFVFKACGEISSVRCGDSSHALSRV 155

Query: 87  SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGI 146
           +G  ++ F  N L+ +Y++   L  A+K+FD M V   ++W S+I+ Y   G  +  L +
Sbjct: 156 TGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEM 215

Query: 147 ACDMYRSEEKF--NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
              M  +E  F  ++ T   +L  C+ +  R  G+Q H FA+ S    N+FVG  L+ MY
Sbjct: 216 FSKM-TNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMY 274

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF---------------- 248
              G   EA  VF  +  KDV   N M+  Y++ G  E A  +F                
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWS 334

Query: 249 -------------------VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
                                +LSS  +PN+ T  +V+S C     +  GK++H  A+K+
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394

Query: 290 -------GVVREISVGNAIVTMYGKHGMSEEAERMFDAIS--ERNLISWTALISGYVRSG 340
                  G   E  V N ++ MY K    + A  MFD++S  ER++++WT +I GY + G
Sbjct: 395 PMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHG 454

Query: 341 HGGKAINGFLEFL--DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS-DVR 397
              KA+    E    D     ++  ++  +  C+  + L +G Q+H +A+++   +  + 
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLF 514

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +   L+D+YAK GD+  AR++ D    K    + ++++G+   +    E+ + +F + R 
Sbjct: 515 VSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGY--GMHGYGEEALGIFEEMRR 572

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSI 515
            G + D VT   +L   +    + +G   +   +KT +       +   L+ +  + G +
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGME-YFNRMKTDFGVSPGPEHYACLVDLLGRAGRL 631

Query: 516 DGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           + A ++ + +  +   V W A+LS   +HG
Sbjct: 632 NAALRLIEEMPMEPPPVVWVALLSCCRIHG 661



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 130/519 (25%), Positives = 204/519 (39%), Gaps = 98/519 (18%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI------ 125
           G   LG+  H F + S    + F  N L+++YAKF  +D A  +F  M V+  +      
Sbjct: 243 GTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMV 302

Query: 126 -----------------------------TWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
                                        TW++ I GY   G     LG+   M  S  K
Sbjct: 303 AGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAI-------KSGFENNVFVGTSLISMYFHSGC 209
            NE T   +L  C+ +   + G++IH +AI       K+G  +   V   LI MY     
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKK 422

Query: 210 FREAENVFRGLAYK--DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE--PNDYTFTN 265
              A  +F  L+ K  DV     MI  Y++ G++  A  +   +   D +  PN +T + 
Sbjct: 423 VDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
            +  C     +  GKQ+H  A++       + V N ++ MY K G   +A  +FD + E+
Sbjct: 483 ALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEK 542

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-L 383
           N ++WT+L++GY   G+G +A+  F E   +G   D   L  V+  CS    ++ G++  
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           +      G          LVD+  + G L +A  L++                       
Sbjct: 603 NRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP-------------------- 642

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR-SLHAYSIK--TGYAADVI 500
                           MEP PV +  LLS      C + G+  L  Y+ K  T  A++  
Sbjct: 643 ----------------MEPPPVVWVALLS-----CCRIHGKVELGEYAAKKITELASNND 681

Query: 501 VGNALIT-MYAKCGSIDGAFQI-----FKGISDRDIVSW 533
               L++ MYA  G      +I      KGI  R   SW
Sbjct: 682 GSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSW 720



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 142/307 (46%), Gaps = 4/307 (1%)

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI--SERNLISWTALI 333
           + + K +H   + FG++  +++ + +++ Y   G    A  +      S+  +  W +LI
Sbjct: 41  ISQVKLIHQKLLSFGIL-TLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLI 99

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
             Y  +G   K ++ F     L    D+     V   C   S++  G   H  +   G++
Sbjct: 100 RSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFM 159

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           S+V +G ALV +Y++ G L  AR + D         +N+I+  +  K+   +  + +   
Sbjct: 160 SNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESY-AKLGKPKMALEMFSK 218

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
                G  PD +T   +L   AS      G+  H +++ +    ++ VGN L+ MYAK G
Sbjct: 219 MTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFG 278

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            +D A  +F  +  +D+VSWNAM++ Y+  G  + A+ LFE+M+ E    D ++    + 
Sbjct: 279 MMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAIS 338

Query: 574 ACIYSGL 580
                GL
Sbjct: 339 GYAQRGL 345


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 180/533 (33%), Positives = 313/533 (58%), Gaps = 6/533 (1%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF  +  +++     MI  + + G +  A  +F+ +  S + P+ +T+++V+S C E
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK---HGMSEEAERMFDAISERNLISW 329
              +  GKQLH   ++ G+  ++ VG ++V MY K    G  +++ ++F+ + E N++SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 330 TALISGYVRSGHGGK-AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           TA+I+ Y +SG   K AI  F + +   I  +    ++V+  C   S+   G Q++ +A+
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           K G  S   +G +L+ +YA+ G ++ AR   D    K    +NAI+ G+ + +    E+ 
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL--KSEEA 241

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
            +LF++    G+     TF+ LLS +AS   + +G  +H   +K GY ++  + NALI+M
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           Y++CG+I+ AFQ+F  + DR+++SW +M++ +A HG    AL +F +M   G  P++I+ 
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
           + VL AC + G+   G   FN + + +G+ P +EH+ACMVDLLGR+G L EAM  INS P
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421

Query: 629 FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAK 688
                L+WRTL+   ++  N++    A++ +L+ EP D  ++IL+SN++A  G   +  K
Sbjct: 422 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 481

Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +R +M +  L KEAGCSWIE+++++H F      HP++ +IY +LD L  ++K
Sbjct: 482 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 534



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 224/463 (48%), Gaps = 16/463 (3%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           A K+FD M  R+ +TWT +I  +   G     + +  DM  S    +  T S +L AC+ 
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH---SGCFREAENVFRGLAYKDVRCV 228
           L     G+Q+H+  I+ G   +V VG SL+ MY      G   ++  VF  +   +V   
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 229 NFMILEYNKAGESEM-AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
             +I  Y ++GE +  A  +F  ++S    PN ++F++V+  C        G+Q++  AV
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           K G+     VGN++++MY + G  E+A + FD + E+NL+S+ A++ GY ++    +A  
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
            F E  D GI   +   A+++ G +    +  G Q+HG  +K GY S+  +  AL+ +Y+
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           + G++++A  + +    +    + ++++GF +         + +F +    G +P+ +T+
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKH--GFATRALEMFHKMLETGTKPNEITY 361

Query: 468 SRLLSLSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
             +LS  +    +  G +  ++   + G    +     ++ +  + G +  A +    + 
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421

Query: 527 -DRDIVSWNAMLSAYALHG---LGKGALLLFEEMKREGFAPDD 565
              D + W  +L A  +HG   LG+ A  +  E +     PDD
Sbjct: 422 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQE-----PDD 459



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 182/349 (52%), Gaps = 5/349 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF---NRLDVAQKLFDGMLVRSAITWT 128
           G L LG+ +H+ +++ G   D     +L+++YAK      +D ++K+F+ M   + ++WT
Sbjct: 65  GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 124

Query: 129 SLIKGYLDDGDYES-VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
           ++I  Y   G+ +   + + C M     + N  + S +L+AC  L D   GEQ++++A+K
Sbjct: 125 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK 184

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G  +   VG SLISMY  SG   +A   F  L  K++   N ++  Y K  +SE AF +
Sbjct: 185 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 244

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +  +    + +TF +++S       + +G+Q+HG  +K G      + NA+++MY +
Sbjct: 245 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 304

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G  E A ++F+ + +RN+ISWT++I+G+ + G   +A+  F + L+ G   +      V
Sbjct: 305 CGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAV 364

Query: 368 IDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           +  CS    +  G +  +    +HG +  +     +VD+  + G L  A
Sbjct: 365 LSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 413


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 200/663 (30%), Positives = 341/663 (51%), Gaps = 6/663 (0%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           A  L   +   N + +A+ +FD +   S + W  +I+ Y   G ++  + +   M +   
Sbjct: 44  ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
                T   +L+ACS L+    G  IH  A   G   +++V T+L+ MY   G   +A+ 
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163

Query: 216 VFRGLAYKDVRCV--NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
           +F  ++++D   V  N MI  ++         H    +  +   PN  T  +++    + 
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             + +GK +H   ++      + +  A++ MY K  +   A ++F+ ++++N + W+A+I
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMI 283

Query: 334 SGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
            GYV       A+  + + L + G+    + LAT++  C+  ++L+ G +LH   IK G 
Sbjct: 284 GGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGM 343

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
             D  +G +L+ +YAK G + +A   LD    K T  ++AI+SG ++      E  +++F
Sbjct: 344 DLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQN--GYAEKALLIF 401

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            Q + +G+ P   T   LL   +  A L  G   H Y++  G+  D  + NA+I MY+KC
Sbjct: 402 RQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKC 461

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G I  + +IF  + +RDI+SWN M+  Y +HGL   AL LF+E++  G  PDD++++ VL
Sbjct: 462 GKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVL 521

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC +SGL   G   F+ + Q + ++P + H+ CMVDLL RAG L EA   I   PF  +
Sbjct: 522 SACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPN 581

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
             +W  L++  +   N +     SK++  L P+  G+F+L+SN+Y+  G  D+AA +R+ 
Sbjct: 582 VRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSI 641

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLLNDEMKLKVKDSSAFE 751
                  K  GCSW+EI   +H F+   + HP+S  I  KL +LL    KL  +  S+F 
Sbjct: 642 QRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFV 701

Query: 752 LQD 754
           L D
Sbjct: 702 LHD 704



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 229/492 (46%), Gaps = 15/492 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM- 119
           +P L+K       L+LG+ +H      G   D + +  L+++YAK   L  AQ LF+ + 
Sbjct: 110 FPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSIS 169

Query: 120 -LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
              R  + W ++I  +     +   +     M ++    N  T   IL           G
Sbjct: 170 HQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQG 229

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           + IHA+ I++ F +NV + T+L+ MY        A  +F  +  K+  C + MI  Y   
Sbjct: 230 KAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLH 289

Query: 239 GESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
                A  ++  +L      P   T   ++  C +   ++ GK+LH   +K G+  + +V
Sbjct: 290 DSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTV 349

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GN++++MY K G+ + A    D +  ++ +S++A+ISG V++G+  KA+  F +    GI
Sbjct: 350 GNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGI 409

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
                 +  ++  CS  + L+ G   HG+ +  G+ +D  +  A++D+Y+K G +  +R 
Sbjct: 410 APYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISRE 469

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    +    +N ++ G+   I     + + LF + +  G++PD VT   +LS  +  
Sbjct: 470 IFDRMQNRDIISWNTMIIGY--GIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHS 527

Query: 478 ACLVRGRSLHA-----YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIV 531
             +  G+   +     ++IK   A  +     ++ + A+ G++D A+   + +    ++ 
Sbjct: 528 GLVTEGKYWFSSMSQNFNIKPRMAHYI----CMVDLLARAGNLDEAYTFIQRMPFVPNVR 583

Query: 532 SWNAMLSAYALH 543
            W A+L+A   H
Sbjct: 584 IWGALLAACRTH 595


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 205/689 (29%), Positives = 368/689 (53%), Gaps = 13/689 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      + +LG  +H   +K G     F  N LI +YAK   L  A+ LFD  L
Sbjct: 151 FPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGL 210

Query: 121 VRS--AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           +     ++W S+I  ++ +G+    L +   M     + N +T    L+AC        G
Sbjct: 211 MEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG 270

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             IHA  +KS    +V+V  +LI+MY + G   +AE VF+ + +KD    N ++    + 
Sbjct: 271 RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQN 330

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
                A + F  +  S  +P+  +  N+I+    +  +  G ++H  A+K G+   + +G
Sbjct: 331 DMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIG 390

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF----LEFLD 354
           N+++ MYGK    +     F+ + E++LISWT +I+GY ++     A+N      LE +D
Sbjct: 391 NSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMD 450

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
           +    D   + +++  CS   + +L  ++HG+ +K G L+D+ +  A+V++Y +   +  
Sbjct: 451 V----DPMMIGSILLACSGLKSEKLIKEIHGYVLKGG-LADILIQNAIVNVYGELALVDY 505

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           AR + +  + K    + ++++  +      E   + LF+      +EPD +T   +L  +
Sbjct: 506 ARHVFESINSKDIVSWTSMITCCVHNGLAIE--ALELFNSLIETNIEPDLITLVSVLYAA 563

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           A+ + L +G+ +H + I+ G+  + ++ N+L+ MYA+CG+++ A  IF  +  RD++ W 
Sbjct: 564 AALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWT 623

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           +M++A  +HG GK A+ LF +M  E   PD I+ L +L AC +SGL   G   F  ++  
Sbjct: 624 SMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNE 683

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           Y L P  EH+AC+VDLL R+  L EA + + + P   S  +W  L+   ++ +N+    +
Sbjct: 684 YKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEV 743

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
           A+K+LL L  +++G+++LVSN +A  G  ++  +VR+ M   +L K+ GCSWIE+++K+H
Sbjct: 744 AAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIH 803

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMKLK 743
            F+A  K HP+   IY KL      +K K
Sbjct: 804 TFMARDKSHPQCNNIYLKLAQFTKLLKEK 832



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 176/652 (26%), Positives = 310/652 (47%), Gaps = 18/652 (2%)

Query: 19  SLPPLKKKVPINTFSPNPKSQVAYLCSIS-----SVSCSERTLLFNDWPQLVKISIGSGD 73
           +LPP    +P  TFS  P S      S++      +  + R  L   + Q +++      
Sbjct: 5   TLPP-NHTLP--TFSHRPISLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKA 61

Query: 74  LKLGQAVHAFLLKSGSQNDT-FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           L  GQ +HA  LK+ +  D+ F     +++Y K      A K+FD M  R+  TW ++I 
Sbjct: 62  LPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIG 121

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
             +  G Y   + +  +M       +  T   +L+AC   ++R  G +IH  A+K G+  
Sbjct: 122 ACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGG 181

Query: 193 NVFVGTSLISMYFHSGCFREAENVF-RGLAYK-DVRCVNFMILEYNKAGESEMAFHVFVH 250
            VFV  +LI+MY   G    A  +F  GL  K D    N +I  +   GES  A  +F  
Sbjct: 182 FVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRR 241

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +     E N YTF + +  C     ++ G+ +H + +K     ++ V NA++ MY   G 
Sbjct: 242 MQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQ 301

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E+AER+F ++  ++ +SW  L+SG V++     AIN F +  D G   D   +  +I  
Sbjct: 302 MEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAA 361

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
               +NL  G+++H +AIKHG  S++ +G +L+D+Y K   +K      +    K    +
Sbjct: 362 SGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISW 421

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
             I++G+ +   +   D + L  + +L  M+ DP+    +L   +        + +H Y 
Sbjct: 422 TTIIAGYAQN--ECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYV 479

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +K G  AD+++ NA++ +Y +   +D A  +F+ I+ +DIVSW +M++    +GL   AL
Sbjct: 480 LKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEAL 538

Query: 551 LLFEEMKREGFAPDDISILGVL-QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
            LF  +      PD I+++ VL  A   S L +G       I + + L  ++ +   +VD
Sbjct: 539 ELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN--SLVD 596

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           +  R G +  A N+ N        +LW ++++ + +    K +I    ++ D
Sbjct: 597 MYARCGTMENARNIFNYVK-QRDLILWTSMINANGMHGCGKDAIDLFSKMTD 647


>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 221/731 (30%), Positives = 358/731 (48%), Gaps = 37/731 (5%)

Query: 10  LQP-PFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKIS 68
           +QP P  SQ  L P    V + +  P P+  VA        +           P+L+ + 
Sbjct: 1   MQPSPTTSQLILLP----VSLGSALPQPREMVALHLHAKQPT-----------PRLLPVP 45

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
                 +   A    +  +    D       ++   K  RL  A  LFD M  ++ + WT
Sbjct: 46  PSHARTRTPTAAAVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWT 105

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           + I G   +G  E+   +  DM  S    N+  C+  L AC+       GEQ+H+ A+++
Sbjct: 106 TAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRA 165

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF  + ++G+ LI +Y   G  R AE VFR +   DV     ++    + GE   A  V 
Sbjct: 166 GFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVL 225

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +     +PN++T T++++ C   +G    +Q+HG  +K    + +    A++  Y ++
Sbjct: 226 CQMTRQGLQPNEHTMTSMLAECPRGIG----EQIHGYMLKVMGSQSVYASTALIDFYSRY 281

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A+ +F+ +  +N++SW +++   +R G    A+  F E +  G+  +    +  +
Sbjct: 282 GDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIAL 341

Query: 369 DGC-SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
             C SVC    LG Q+H  AIK   ++D+R+  AL+ +Y + G +     +L        
Sbjct: 342 SACGSVC----LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDL 397

Query: 428 AEFNAILS-----GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             + A +S     GF EK        + L  Q    G  P+   FS  LS  A  A L +
Sbjct: 398 VSWTAAISANFQNGFSEK-------AVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQ 450

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           GR LH  ++K G    V  GNALI MY+KCG I  A   F  +   D++SWN+++   A 
Sbjct: 451 GRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQ 510

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG    AL  F EM    + PDD + L VL  C ++GL + G   F ++   YGL P   
Sbjct: 511 HGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPS 570

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ACM+D+LGR GR +EA+ +I + PF    L+W+TL++  KL  N     LA+ +L++L
Sbjct: 571 HYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMEL 630

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
             +D+ S++L+SN+YA      +A +VR  M+++ + K+AG SWIE+ ++++ FVA    
Sbjct: 631 SERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGDMS 690

Query: 723 HPESEEIYSKL 733
           HP+S  IY  L
Sbjct: 691 HPDSTSIYQML 701


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 203/681 (29%), Positives = 356/681 (52%), Gaps = 5/681 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++    +  L+  + VH  +L  G ++D     +LIN+Y        A+ +F+ + +RS
Sbjct: 9   LLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRS 68

Query: 124 AI-TWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQI 181
            +  W SL+ GY  +  +   L +   +        +  T   +++A   L     G  I
Sbjct: 69  DVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMI 128

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   +KSG   +V V +SL+ MY     F ++  VF  +  +DV   N +I  + + G++
Sbjct: 129 HTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDA 188

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           E A  +F  +  SDFEPN  + T  IS C   L +E GK++H   +K     +  V +A+
Sbjct: 189 EKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSAL 248

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V MYG+    E A  +F  +  ++L++W ++I GYV  G     +      +  G     
Sbjct: 249 VDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQ 308

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           + L +++  CS   NL  G  +HG+ I+    +D+ +  +L+D+Y K G++K A  +   
Sbjct: 309 TTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLK 368

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
                   +N ++SG++     +    + ++ Q    G++PD VTF+ +LS  +  A L 
Sbjct: 369 TQKDVVESWNVMISGYVS--VGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALE 426

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           +G+ +H    ++    D ++ +AL+ MY+KCG++  A +IF  I  +D+VSW  M+SAY 
Sbjct: 427 KGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYG 486

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HG  + AL  F+EM++ G  PD ++ L VL AC ++GL + G+  F+++   YG+   +
Sbjct: 487 SHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASI 546

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFS-ESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           E ++C++D+LGRAGRL EA  ++   P + ++  L  TL     L  +       +K L+
Sbjct: 547 EQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLV 606

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +  P DA ++ ++ N+YA     D A +VR  M ++ + K+ GCSWIE++ K+ HF A  
Sbjct: 607 EKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAED 666

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
           + HP++E +Y  L LL+  M+
Sbjct: 667 RSHPQAENVYECLALLSGHME 687



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 227/465 (48%), Gaps = 5/465 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K     G   LG+ +H  ++KSG   D   A++L+ +YAKFN  + + ++FD M 
Sbjct: 109 YPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMP 168

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R   +W ++I  +   GD E  L +   M RS+ + N  + +V + ACS L     G++
Sbjct: 169 ERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKE 228

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   +K  FE + +V ++L+ MY        A  VF+ +  K +   N MI  Y   G+
Sbjct: 229 IHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGD 288

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           S+    +   ++     P+  T T+++  C  +  +  GK +HG  ++  V  +I +  +
Sbjct: 289 SKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCS 348

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G  + AE +F    +  + SW  +ISGYV  G+  KA++ + + + +G+  D
Sbjct: 349 LIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPD 408

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLL 419
                +V+  CS  + LE G Q+H  +I    L +D  L +AL+D+Y+K G++K A  + 
Sbjct: 409 IVTFTSVLSTCSQLAALEKGKQIH-LSISESRLETDELLLSALLDMYSKCGNVKEASRIF 467

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    K    +  ++S +         + +  F + +  G++PD VTF  +LS       
Sbjct: 468 NSIPKKDVVSWTVMISAYGSH--GQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGL 525

Query: 480 LVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           +  G +       K G  A +   + LI +  + G +  A+ I +
Sbjct: 526 IDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQ 570



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 140/288 (48%), Gaps = 16/288 (5%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +SS L +++  C+   +L     +H   +  G  SDV L  +L+++Y    D  SAR++ 
Sbjct: 2   ESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVF 61

Query: 420 DGFSCKYTAE-FNAILSGFMEKIADDEEDVMVLFSQQRLAGME---PDPVTFSRLLSLSA 475
           +    +     +N+++SG+ +       D + +F  +RL       PD  T+  ++    
Sbjct: 62  ENIDIRSDVYIWNSLVSGYSKN--SMFHDTLKVF--KRLLNCPICVPDSFTYPNVIKAYG 117

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           +      GR +H   +K+G+  DV+V ++L+ MYAK    + + Q+F  + +RD+ SWN 
Sbjct: 118 ALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNT 177

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ++S++   G  + AL LF  M+R  F P+ +SI   + AC      E G     EI + Y
Sbjct: 178 VISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERG----KEIHRKY 233

Query: 596 GLRPI-LEHF--ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
             +   L+ +  + +VD+ GR   L  A  +       +S + W +++
Sbjct: 234 LKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMR-RKSLVAWNSMI 280


>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
          Length = 711

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 211/675 (31%), Positives = 351/675 (52%), Gaps = 12/675 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +H  L+K G  +  F  ++LI LY++ ++L+ +  +F  M  ++ ++WT++I G+  
Sbjct: 32  GTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFAL 91

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
               E  L +   M  S  K N+ T + +   C+       G  +HA  ++ GF + V V
Sbjct: 92  HNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRSVHALQMRMGFHSYVHV 151

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L+SMY   GC  EA+ +F  +A KD+   N +I   ++   ++    +   +     
Sbjct: 152 SNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHI 211

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+  +F  V+S C     VEEG+      ++ G+   +   + +V + G+ G+ EEA  
Sbjct: 212 VPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWD 271

Query: 317 MFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-----ICCDSSCLATVIDG 370
           +   +S   N + W +L+      G+    I      L L         D S LA  +  
Sbjct: 272 LIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSS 331

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+       G QLHG  +K G  S V +G++L+ +Y++   L+S+ ++      K T  +
Sbjct: 332 CADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSW 391

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
            A++SGF   + +  E  + LF+  RL+  +P+ +TF+ L S+  + A L  G+S+HA  
Sbjct: 392 TAMISGF--ALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLALGKSVHALQ 449

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           ++ G+ + V V NAL++MYAKCG ID A  IF  I+ +D+VSWNAM+   + +GL K  L
Sbjct: 450 MRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCL 509

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGL-SEGGICLFNEIEQIYGLRPILEHFACMVD 609
            L +EM+R+   PD +S LGVL +C ++ L  EG  C    IE  +G++P L+H++CMVD
Sbjct: 510 DLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIE--HGIKPGLDHYSCMVD 567

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGRAG L EA +LI +     + ++W +L+   ++  N    I A++  L LEP  A +
Sbjct: 568 LLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGCAAT 627

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP-ESEE 728
            I ++N+YA  G   + A+VR  M    L    GCSWIE+  K++ F A  +    +   
Sbjct: 628 HIQLANLYATIGCWSDVARVRMAMKARGLKTNIGCSWIEVGDKVYSFTAENRSKSHQVNN 687

Query: 729 IYSKLDLLNDEMKLK 743
           + + LD L   M+ K
Sbjct: 688 VLAILDCLQAHMECK 702



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 208/445 (46%), Gaps = 21/445 (4%)

Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIF---GEQIHAFAIKSGFENNVFVGTSLISMYF 205
           +++R  E   +   S++  A S   DR     G Q+H   +K G ++ VF+G+SLI++Y 
Sbjct: 2   ELHRKGETSTDQ--SILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYS 59

Query: 206 HSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
                  +  VF+ +  K+      MI  +      E   H+F  ++ S  +PND TF  
Sbjct: 60  RCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFAT 119

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
           + SVC ++  +  G+ +H L ++ G    + V NA+++MY K G  EEA+ +F  I+ ++
Sbjct: 120 LFSVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKD 179

Query: 326 LISWTALISG---YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           L+SW A+I G   YV + H    ++   E     I  D+     V+  C     +E G  
Sbjct: 180 LVSWNAIIFGCSQYVLAKH---CLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRH 236

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
                I+HG    +   + +VD+  + G L+ A  L+   S    A     L G      
Sbjct: 237 CFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCR--V 294

Query: 443 DDEEDVMVLFSQQRLAGMEP-------DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
                + +  ++ RL  +EP       D    +  +S  A +    +G  LH   +K G 
Sbjct: 295 HGNISIGIQAAEHRLK-LEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGC 353

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            + V +G++LIT+Y++C  ++ ++ +F+ +  ++ VSW AM+S +ALH   +  L LF  
Sbjct: 354 DSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFAS 413

Query: 556 MKREGFAPDDISILGVLQACIYSGL 580
           M+     P+DI+   +   C    L
Sbjct: 414 MRLSSCKPNDITFATLFSVCTNHAL 438



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 221/485 (45%), Gaps = 23/485 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L LG++VHA  ++ G  +    +N L+++YAK   ++ AQ +F  +  +  ++W ++I G
Sbjct: 130 LALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFG 189

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA--IKSGFE 191
                  +  L +  +M R     +  +   +L +C     R+  E  H F   I+ G +
Sbjct: 190 CSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCR--HARLVEEGRHCFKTMIEHGIK 247

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA-GESEMAFHVFVH 250
             +   + ++ +   +G   EA ++ + ++      +   +L   +  G   +      H
Sbjct: 248 PGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEH 307

Query: 251 LLSSDFEP-------NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
            L    EP       +       +S C +     +G QLHGL VK G    + +G++++T
Sbjct: 308 RL--KLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLIT 365

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-CDSS 362
           +Y +    E +  +F  +  +N +SWTA+ISG+         ++ F   + L  C  +  
Sbjct: 366 LYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFAS-MRLSSCKPNDI 424

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
             AT+   C+  + L LG  +H   ++ G+ S V +  AL+ +YAK G +  A+ +    
Sbjct: 425 TFATLFSVCTNHALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFI 484

Query: 423 SCKYTAEFNAILSGFME-KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
           +CK    +NA++ G  +  +A    D++    +Q +    PD ++F  +LS S   A LV
Sbjct: 485 ACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIV---PDALSFLGVLS-SCRHARLV 540

Query: 482 -RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
             GR      I+ G    +   + ++ +  + G ++ A+ + + +S   + V W ++L +
Sbjct: 541 EEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGS 600

Query: 540 YALHG 544
             +HG
Sbjct: 601 CRVHG 605



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 7/174 (4%)

Query: 50  SCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL 109
           SC    + F     L  +      L LG++VHA  ++ G  +    +N L+++YAK   +
Sbjct: 418 SCKPNDITF---ATLFSVCTNHALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCI 474

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
           D AQ +F  +  +  ++W ++I G    G  +  L +  +M R     +  +   +L +C
Sbjct: 475 DEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSC 534

Query: 170 SLLEDRIFGEQIHAFA--IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
                R+  E  H F   I+ G +  +   + ++ +   +G   EA ++ + ++
Sbjct: 535 R--HARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMS 586


>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
          Length = 691

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 197/613 (32%), Positives = 333/613 (54%), Gaps = 4/613 (0%)

Query: 69  IGSGDLKLGQAVHAFLLKSGS--QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           I  GD + G+AVH  +++ G   + D F AN L+N+Y K   L  A++LFD M  R+ ++
Sbjct: 70  IARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVS 129

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           + +L++ +   GD+E+   +   +     + N+   + +L+    ++       +H+ A 
Sbjct: 130 FVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW 189

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G ++N FVG+ LI  Y       +AE+VF G+  KD      M+  Y++    E AF 
Sbjct: 190 KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR 249

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           VF  +  S  +PN +  T+V+        V  GK +HG A+K     E  VG A++ MY 
Sbjct: 250 VFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYA 309

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  ++A   F+ I   ++I  + +IS Y +S    +A   FL  +   +  +   L++
Sbjct: 310 KCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSS 369

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+  C+    L+ G Q+H  AIK G+ SD+ +G AL+D YAK  D+ S+  +        
Sbjct: 370 VLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDAN 429

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N I+ GF +  +   E+ + +F + + A M    VT+S +L   AS A +     +
Sbjct: 430 EVSWNTIVVGFSQ--SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQI 487

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H    K+ +  D ++GN+LI  YAKCG I  A ++F+ + +RDI+SWNA++S YALHG  
Sbjct: 488 HCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQA 547

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             AL LF+ M +     +DI+ + +L  C  +GL   G+ LF+ +   +G++P +EH+ C
Sbjct: 548 ADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC 607

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           +V LLGRAGRL++A+  I   P + S ++WR L+S   +  N      +++++L++EP+D
Sbjct: 608 IVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQD 667

Query: 667 AGSFILVSNMYAG 679
             +++L+SNMYA 
Sbjct: 668 ETTYVLLSNMYAA 680



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 246/482 (51%), Gaps = 4/482 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K++I      L   VH+   K G  ++ F  + LI+ Y+  + +  A+ +F+G++ + 
Sbjct: 168 MLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKD 227

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           A+ WT+++  Y ++   E+   +   M  S  K N    + +L+A   L   + G+ IH 
Sbjct: 228 AVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHG 287

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK+  +    VG +L+ MY   G  ++A   F  + Y DV  ++FMI  Y ++ ++E 
Sbjct: 288 CAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQ 347

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           AF +F+ L+ S   PN+Y+ ++V+  C   + ++ GKQ+H  A+K G   ++ VGNA++ 
Sbjct: 348 AFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMD 407

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K    + + ++F ++ + N +SW  ++ G+ +SG G +A++ F E     + C    
Sbjct: 408 FYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVT 467

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            ++V+  C+  +++    Q+H    K  + +D  +G +L+D YAK G ++ A  +     
Sbjct: 468 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLM 527

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +NAI+SG+   +     D + LF +   + +E + +TF  LLS+ +S   +  G
Sbjct: 528 ERDIISWNAIISGY--ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585

Query: 484 RSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYA 541
            SL  +  I  G    +     ++ +  + G ++ A Q    I S    + W A+LS+  
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645

Query: 542 LH 543
           +H
Sbjct: 646 IH 647



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 19/285 (6%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS--DVRLGTALVDIYAKGGDLKSARM 417
           DS   A  + GC    +   G  +HG  ++ G +   D+     L+++Y K G L SAR 
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L D    +    F  ++    ++   D E    LF + R  G E +    + +L L+ + 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQR--GDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
                   +H+ + K G+  +  VG+ LI  Y+ C  +  A  +F GI  +D V W AM+
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA--CIYS-----GLSEGGICLFNE 590
           S Y+ +   + A  +F +M+  G  P+  ++  VL+A  C+ S     G+    I   N+
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            E   G          ++D+  + G + +A       P+ +  LL
Sbjct: 296 TEPHVG--------GALLDMYAKCGDIKDARLAFEMIPYDDVILL 332



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 47  SSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF 106
           + + C++ T     +  +++    +  ++    +H  + KS   NDT   N+LI+ YAK 
Sbjct: 459 AQMPCTQVT-----YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKC 513

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL 166
             +  A K+F  ++ R  I+W ++I GY   G     L +   M +S  + N+ T   +L
Sbjct: 514 GYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 573

Query: 167 EACS 170
             CS
Sbjct: 574 SVCS 577


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 208/664 (31%), Positives = 350/664 (52%), Gaps = 5/664 (0%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H   +KSG+    + ANN+I+ YAK   + +A K+F     R A++W ++I G+++ G++
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
           E+ L     M R     + ++   IL+  + +     G+Q+H+  +K G+E NVF G++L
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           + MY       +A  VF+ +  ++    N +I  Y + G+   AF +   +     E +D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD- 319
            TF  ++++  +    +   Q+H   VK G+  + +V NAI+T Y + G  E+AER+FD 
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
           AI  R+L++W ++++ Y+ +    +A   FLE   LG   D     +VI      S+   
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQ 321

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKG--GDLKSARMLLDGFSCKYTAEFNAILSGF 437
           G  LHG  IK G    V +  +L+ +Y K     +  A  + +    K    +N+IL+GF
Sbjct: 322 GKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGF 381

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +  +   ED +  F   R   +  D   FS +L   +  A L  G+ +H   +K+G+  
Sbjct: 382 SQ--SGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEP 439

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           +  V ++LI MY+KCG I+ A + F        ++WN+++  YA HG GK AL LF  MK
Sbjct: 440 NGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMK 499

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
                 D I+ + VL AC + GL E G      +E  YG+ P +EH+ACM+DLLGRAGRL
Sbjct: 500 DRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRL 559

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
            EA  LI + PF    ++W+TL+   +   + + +   +  LL+LEP++  +++L+S+M+
Sbjct: 560 DEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMF 619

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
                 +E A ++  M +  + K  G SWIE+ +++  F A  + HP  EEIY +L  L 
Sbjct: 620 GHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELM 679

Query: 738 DEMK 741
           +E++
Sbjct: 680 EEIR 683



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 243/477 (50%), Gaps = 15/477 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G +++GQ VH+ ++K G + + F  + L+++YAK  R++ A ++F  + +R+++TW +LI
Sbjct: 114 GYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALI 173

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY   GD  +   +   M     + ++ T + +L      +      Q+HA  +K G  
Sbjct: 174 SGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLA 233

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRG-LAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           ++  V  ++I+ Y   G   +AE VF G +  +D+   N M+  Y    + E AF +F+ 
Sbjct: 234 SDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLE 293

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-HG 309
           +    FEP+ YT+T+VIS  +E     +GK LHGL +K G+   + + N+++ MY K H 
Sbjct: 294 MQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHS 353

Query: 310 MS-EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
            S +EA  +F+++  ++ +SW ++++G+ +SG    A+  F       +  D    + V+
Sbjct: 354 KSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVL 413

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS  + L+LG Q+H   +K G+  +  + ++L+ +Y+K G ++ AR   D      + 
Sbjct: 414 RSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSI 473

Query: 429 EFNAILSGFME----KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
            +N+++ G+ +    KIA    D+  L   +R+   + D +TF  +L+  +    +  G 
Sbjct: 474 AWNSLIFGYAQHGRGKIA---LDLFFLMKDRRV---KLDHITFVAVLTACSHIGLVEEGW 527

Query: 485 S-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
           S L +     G    +     +I +  + G +D A  + + +  + D + W  +L A
Sbjct: 528 SFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGA 584



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 470 LLSLSASQ-ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
           L SLS S    L R    H  +IK+G  A +   N +I+ YAKCG I  A ++F   S R
Sbjct: 4   LHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQR 63

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D VSWN M++ +   G  + AL   + MKR GFA D  S   +L+     G  E G  + 
Sbjct: 64  DAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH 123

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           + + ++ G    +   + ++D+  +  R+ +A  +  S     S + W  L+S
Sbjct: 124 SMMVKM-GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNS-VTWNALIS 174



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 33/320 (10%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LGQ VH  +LKSG + + F A++LI +Y+K   ++ A+K FD     S+I W SLI G
Sbjct: 422 LQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFG 481

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL----EDRIFGEQIHA-FAIKS 188
           Y   G  +  L +   M     K +  T   +L ACS +    E   F + + + + I  
Sbjct: 482 YAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPP 541

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHV 247
             E+       +I +   +G   EA+ +   + ++ D      ++      G+ E+A  V
Sbjct: 542 RMEHY----ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQV 597

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENL-GVEEGKQLHGLAVKFGVVR-----EISVGNAI 301
             HLL  + EP ++    ++S  + +L    E   +  L  + GV +      I V N +
Sbjct: 598 ASHLL--ELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEV 655

Query: 302 VT-------------MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            +             +Y + G   E  R  D ++   ++S+ +  S Y++S  G  ++  
Sbjct: 656 RSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYVANSEIMSYLSGSSPYIKS--GAVSVLS 713

Query: 349 FLEFLDLGICCDSSCLATVI 368
            L + D  IC     LA  +
Sbjct: 714 VLVYKDTDICTSVPDLAPSV 733


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 195/680 (28%), Positives = 359/680 (52%), Gaps = 3/680 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P  V + + +   +L Q +   ++K+G  N+      L++L++K+  ++ A ++F+ +  
Sbjct: 51  PAAVLLELCTSMKELHQII-PLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           +    + +++KGY  +   E+ L   C M   + K   +  + +L+ C    D   G++I
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   I + F  NVF  T +++MY       +A  +F  +  +D+   N +I  +++ G +
Sbjct: 170 HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFA 229

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  + + +      P+  T   V+    +   +  GK +HG A++ G  + +++  A+
Sbjct: 230 KKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTAL 289

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
             MY K G  E A  +FD + ++ ++SW +++ GYV++G   KAI  F + L+ GI    
Sbjct: 290 ADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTG 349

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             +   +  C+   +LE G  +H F  +    SD+ +  +L+ +Y+K   +  A  + + 
Sbjct: 350 VTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            + +    +NA++ G+ +     E   +  FS+ +  GM+PD  T   ++   A  +   
Sbjct: 410 LNGRTHVSWNAMILGYAQNGRVSE--ALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTR 467

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
             + +H   I++    ++ V  AL+ MY+KCG+I  A ++F  ISDR +++WNAM+  Y 
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HGLG+ AL LF++MK+    P+DI+ L V+ AC +SGL + G+  F  ++Q YGL P +
Sbjct: 528 THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           +H+  MVDLLGRAGR+ EA + I + P S    ++       K+  N +    A+K+L +
Sbjct: 588 DHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFE 647

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           L P + G  +L++N+YA      + A+VR TM    L K  GCS +E+ +++H F +   
Sbjct: 648 LNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGST 707

Query: 722 DHPESEEIYSKLDLLNDEMK 741
            HP+S+ IY+ L+ L  E+K
Sbjct: 708 THPQSKRIYAFLEELVYEIK 727


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 203/671 (30%), Positives = 354/671 (52%), Gaps = 7/671 (1%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            G  V + ++ SG QN    AN+LI ++    R+  A+KLFD M     I+W ++I  Y  
Sbjct: 466  GLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSH 525

Query: 137  DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
             G       +  DM     + +  T   ++  C+  +    G  IH+  ++S  +++V V
Sbjct: 526  QGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTV 585

Query: 197  GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              +L++MY  +G   +AE +F  ++ +D+   N MI  Y +   S  A      L  ++ 
Sbjct: 586  INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 645

Query: 257  EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
             PN  TF++ +  C     + +GK +H + ++  + R + VGN+++TMYGK    E+AE+
Sbjct: 646  SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 705

Query: 317  MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            +F ++   +++S+  LI GY     G KA+  F      GI  +   +  +    +  ++
Sbjct: 706  VFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSND 765

Query: 377  LE-LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L   G  LH + I+ G+LSD  +  +L+ +YAK G+L+S+  + +  + K    +NAI++
Sbjct: 766  LHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIA 825

Query: 436  GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
              ++      E+ + LF   + AG + D V  +  LS  AS A L  G  LH   +K+G 
Sbjct: 826  ANVQ--LGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGL 883

Query: 496  AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +D  V NA + MY KCG +D   Q+    + R    WN ++S YA +G  K A   F++
Sbjct: 884  DSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQ 943

Query: 556  MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
            M   G  PD ++ + +L AC ++GL + GI  +N +   +G+ P ++H  C+VDLLGR G
Sbjct: 944  MVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLG 1003

Query: 616  RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
            R +EA   I   P   + L+WR+L+S S+   N +     +K+LL+L+P D  +++L+SN
Sbjct: 1004 RFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSN 1063

Query: 676  MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
            +YA      +  K+R+ M  + ++K   CSW+++ +++  F    + H  +E+IY+KL  
Sbjct: 1064 LYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKL-- 1121

Query: 736  LNDEMKLKVKD 746
              DEM LK+++
Sbjct: 1122 --DEMLLKLRE 1130



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 278/570 (48%), Gaps = 13/570 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G A+HA   ++G   + +    L++LY     +  AQ+LF  M  R+ ++WT+L+     
Sbjct: 365 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 424

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  E  L     M R     N +  + ++  C  LE+ + G Q+ +  I SG +N V V
Sbjct: 425 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 484

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLI+M+ + G   +AE +F  +   D    N MI  Y+  G     F VF  +     
Sbjct: 485 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 544

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+  T  +++SVC  +     G  +H L ++  +   ++V NA+V MY   G   +AE 
Sbjct: 545 RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 604

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  +S R+LISW  +IS YV++ +   A+    +        +    ++ +  CS    
Sbjct: 605 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 664

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G  +H   ++     ++ +G +L+ +Y K   ++ A  +           +N ++ G
Sbjct: 665 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGG 724

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYSIKTGY 495
           +   + +D    M +FS  R AG++P+ +T   +  S ++S      GR LHAY I+TG+
Sbjct: 725 Y--AVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGF 782

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +D  V N+LITMYAKCG+++ +  IF  I++++IVSWNA+++A    G G+ AL LF +
Sbjct: 783 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFID 842

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV----DLL 611
           M+  G   D + +   L +C      E G+ L        G++  L+  + +V    D+ 
Sbjct: 843 MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHG-----LGMKSGLDSDSYVVNAAMDMY 897

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           G+ G++ E + ++           W TL+S
Sbjct: 898 GKCGKMDEMLQVVPDQAIRPQQ-CWNTLIS 926



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 208/421 (49%), Gaps = 8/421 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +   S     G  +H+  L+S   +     N L+N+Y+   +L  A+ LF  M  R 
Sbjct: 554 LMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRD 613

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+W ++I  Y+ + +    L     ++ + E  N  T S  L ACS     I G+ +HA
Sbjct: 614 LISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHA 673

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             ++   + N+ VG SLI+MY       +AE VF+ +   D+   N +I  Y    +   
Sbjct: 674 IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTK 733

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVI-SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           A  VF  + S+  +PN  T  N+  S    N     G+ LH   ++ G + +  V N+++
Sbjct: 734 AMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLI 793

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
           TMY K G  E +  +F++I+ +N++SW A+I+  V+ GHG +A+  F++    G   D  
Sbjct: 794 TMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRV 853

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           CLA  +  C+  ++LE G+QLHG  +K G  SD  +  A +D+Y K G +     ++   
Sbjct: 854 CLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQ 913

Query: 423 SCKYTAEFNAILSGFME--KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
           + +    +N ++SG+ +     + EE     F Q    G +PD VTF  LLS + S A L
Sbjct: 914 AIRPQQCWNTLISGYAKYGYFKEAEET----FKQMVATGRKPDYVTFVALLS-ACSHAGL 968

Query: 481 V 481
           V
Sbjct: 969 V 969



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 236/503 (46%), Gaps = 18/503 (3%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQ-----KLFDGMLVRSAITWTSLIKGY 134
           +H   ++       F  N L+  Y  F + D +       LFD M  R+  TW + + G 
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFY--FRQRDASAAAAALHLFDEMADRTPSTWYTAVSGC 318

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL---EDRIFGEQIHAFAIKSGFE 191
           +  G +     +   M       +    + ++ AC      E    G  IHA   ++G  
Sbjct: 319 VRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLM 378

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            NV++GT+L+ +Y   G   +A+ +F  +  ++V     +++  +  G  E A   +  +
Sbjct: 379 GNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQM 438

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                  N   F  V+S+C        G Q+    +  G+  ++SV N+++TM+G  G  
Sbjct: 439 RRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRV 498

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL---GICCDSSCLATVI 368
            +AE++FD + E + ISW A+IS Y    H G     FL F D+   G+  D++ L +++
Sbjct: 499 HDAEKLFDRMEEHDTISWNAMISMY---SHQGICSKCFLVFSDMRHHGLRPDATTLCSLM 555

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+   +   G  +H   ++    S V +  ALV++Y+  G L  A  L    S +   
Sbjct: 556 SVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLI 615

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N ++S +++    +  D +    Q       P+ +TFS  L   +S   L+ G+ +HA
Sbjct: 616 SWNTMISSYVQNC--NSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHA 673

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             ++     +++VGN+LITMY KC S++ A ++F+ +   DIVS+N ++  YA+   G  
Sbjct: 674 IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTK 733

Query: 549 ALLLFEEMKREGFAPDDISILGV 571
           A+ +F  M+  G  P+ I+++ +
Sbjct: 734 AMQVFSWMRSAGIKPNYITMINI 756



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 209/463 (45%), Gaps = 27/463 (5%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHS----------GCFREAENVFRGLAYKDVR-CVN 229
           IH  A++     + F   +L++ YF              F E  +      Y  V  CV 
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCV- 319

Query: 230 FMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG----KQLHGL 285
                  + G    AF +   +       + +   ++++ C E  G +EG      +H L
Sbjct: 320 -------RCGSHGKAFEMLRGMREPGVPLSGFALASLVTAC-ERRGRDEGIACGAAIHAL 371

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
             + G++  + +G A++ +YG  G+  +A+R+F  + ERN++SWTAL+     +G+  +A
Sbjct: 372 THRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEA 431

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +  + +    G+ C+++  ATV+  C    N   GLQ+    I  G  + V +  +L+ +
Sbjct: 432 LRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITM 491

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           +   G +  A  L D      T  +NA++S +  +    +    ++FS  R  G+ PD  
Sbjct: 492 FGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSK--CFLVFSDMRHHGLRPDAT 549

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T   L+S+ AS      G  +H+  +++   + V V NAL+ MY+  G +  A  +F  +
Sbjct: 550 TLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 609

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
           S RD++SWN M+S+Y  +     AL    ++     +P+ ++    L AC   G    G 
Sbjct: 610 SRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGK 669

Query: 586 CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
            +   + Q+   R +L   + ++ + G+   + +A  +  S P
Sbjct: 670 MVHAIVLQLSLQRNLLVGNS-LITMYGKCNSMEDAEKVFQSMP 711



 Score = 43.1 bits (100), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 6/130 (4%)

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKH---GMSEEAERMFDAISERNLISWTALISGYVR 338
           +HGLAV+  +       N ++  Y +      +  A  +FD +++R   +W   +SG VR
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE---LGLQLHGFAIKHGYLSD 395
            G  G A        + G+      LA+++  C      E    G  +H    + G + +
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157

Query: 396 VRLGTALVDI 405
           V +G AL+ +
Sbjct: 158 VYIGRALLHL 167


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 210/715 (29%), Positives = 363/715 (50%), Gaps = 48/715 (6%)

Query: 50  SCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL 109
           S +ER ++   W  ++   + +GDLK  +     L     + +    N+++  Y    R+
Sbjct: 258 SMTERNVV--SWNAMISGYVQNGDLKNARK----LFDEMPEKNVASWNSVVTGYCHCYRM 311

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
             A++LFD M  R++++W  +I GY+   DY     +   M R+  + ++    V+L A 
Sbjct: 312 SEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAI 371

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVN 229
           + L+D      +   AIK+G+E +V VG+++++ Y  +G    A + F  +  ++     
Sbjct: 372 TGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWT 431

Query: 230 FMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV-ISVCYENLG-VEEGKQLHGLAV 287
            MI  + + G  + A  ++  +      P     T   +   Y  +G +++ + +    +
Sbjct: 432 TMIAAFAQCGRLDDAIQLYERV------PEQTVATKTAMMTAYAQVGRIQKARLIFDEIL 485

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
              VV      NAI+  Y ++GM +EA+ +F  +  +N  SW A+I+G+V++    +A+ 
Sbjct: 486 NPNVV----AWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALE 541

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
             +E    G     S   + +  C+   ++E+G  +H  AIK G   +  +   L+ +YA
Sbjct: 542 LLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYA 601

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV----------------- 450
           K G+++    +      K T  +N+++SG  E    D+  V+                  
Sbjct: 602 KCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISA 661

Query: 451 ------------LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
                       LF      G++P+ +T + LLS   +   +  G   HA   K G+   
Sbjct: 662 YVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTF 721

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           + VGN+LITMY KCG  DG F +F+ + + D+++WNA+L   A +GLGK A+ +FE+M+ 
Sbjct: 722 LFVGNSLITMYFKCGYEDG-FCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEV 780

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS 618
           EG  PD +S LGVL AC ++GL + G   FN + Q YG+ P++ H+ CMVDLLGRAG LS
Sbjct: 781 EGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLS 840

Query: 619 EAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
           EA  LI + P     ++W  L+   ++  N +     ++RL  +    + +++L+SN++A
Sbjct: 841 EAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFA 900

Query: 679 GQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
            QGM D+ A++R  M D  L+KE G SWI++ +KLH FV   + H + EEIYS L
Sbjct: 901 SQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSAL 955



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 232/521 (44%), Gaps = 57/521 (10%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           Q D    N++IN Y++  ++D A+ LFD  + ++  TWT L+ GY  +G  E    +   
Sbjct: 199 QRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFES 258

Query: 150 MY-RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG 208
           M  R+   +N      +         ++F E           E NV    S+++ Y H  
Sbjct: 259 MTERNVVSWNAMISGYVQNGDLKNARKLFDEMP---------EKNVASWNSVVTGYCH-- 307

Query: 209 CFR--EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV 266
           C+R  EA  +F  +  ++      MI  Y    +   A+ VFV +  +   P+   F  V
Sbjct: 308 CYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVV 367

Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           +S       +E    L  +A+K G   ++ VG+AI+  Y ++G  + A   F+ + ERN 
Sbjct: 368 LSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNE 427

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG-LQLHG 385
            SWT +I+ + + G    AI  +    +  +   ++ +          +  ++G +Q   
Sbjct: 428 YSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMT---------AYAQVGRIQKAR 478

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
                    +V    A++  Y + G LK A+ L      K +A + A+++GF++   ++ 
Sbjct: 479 LIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQN--EES 536

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
            + + L  +   +G  P   +F+  LS  A+   +  GR +H+ +IKTG   +  V N L
Sbjct: 537 REALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGL 596

Query: 506 ITMYAKCGSI-------------------------------DGAFQIFKGISDRDIVSWN 534
           I+MYAKCG++                               D A  +F+ +  RD+VSW 
Sbjct: 597 ISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWT 656

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           A++SAY   G G+ AL LF +M   G  P+ +++  +L AC
Sbjct: 657 AIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSAC 697



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 181/410 (44%), Gaps = 27/410 (6%)

Query: 175 RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
           R+F E I         + +V    S+I+ Y  +G   EA  +F     K++R    ++  
Sbjct: 192 RVFNEMI---------QRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTG 242

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
           Y K G  E A  VF     S  E N  ++  +IS   +N  ++  ++L     +    + 
Sbjct: 243 YAKEGRIEEAREVF----ESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPE----KN 294

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
           ++  N++VT Y       EA  +FD + ERN +SW  +ISGYV      +A + F++   
Sbjct: 295 VASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCR 354

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
                D S    V+   +   +LEL   L   AIK GY  DV +G+A+++ Y + G L  
Sbjct: 355 TVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDL 414

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A    +    +    +  +++ F +      +D + L+  +R+   E    T + +++  
Sbjct: 415 AMHFFETMPERNEYSWTTMIAAFAQ--CGRLDDAIQLY--ERVP--EQTVATKTAMMTAY 468

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           A    + + R +    +      +V+  NA+I  Y + G +  A  +F+ +  ++  SW 
Sbjct: 469 AQVGRIQKARLIFDEILN----PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWA 524

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           AM++ +  +   + AL L  E+ R G  P D S    L AC   G  E G
Sbjct: 525 AMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 154/364 (42%), Gaps = 48/364 (13%)

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N  +   G+ G  EEA R+F+ + +R+++SW ++I+GY ++G   +A   F  F+   I 
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI- 233

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
                   ++ G +    +E   ++     +   +S      A++  Y + GDLK+AR L
Sbjct: 234 ---RTWTILLTGYAKEGRIEEAREVFESMTERNVVS----WNAMISGYVQNGDLKNARKL 286

Query: 419 LDGFSCKYTAEFNAILSGFME------------------------------KIADDEEDV 448
            D    K  A +N++++G+                                 I+D  E  
Sbjct: 287 FDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAW 346

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
            V     R     PD   F  +LS       L    SL   +IKTGY  DV+VG+A++  
Sbjct: 347 DVFVKMCRTVA-RPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNA 405

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           Y + GS+D A   F+ + +R+  SW  M++A+A  G    A+ L+E +  +  A     +
Sbjct: 406 YTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMM 465

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
               Q     G  +    +F+EI     L P +  +  ++    + G L EA +L    P
Sbjct: 466 TAYAQV----GRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMP 516

Query: 629 FSES 632
              S
Sbjct: 517 VKNS 520


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 203/671 (30%), Positives = 354/671 (52%), Gaps = 7/671 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  V + ++ SG QN    AN+LI ++    R+  A+KLFD M     I+W ++I  Y  
Sbjct: 164 GLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSH 223

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G       +  DM     + +  T   ++  C+  +    G  IH+  ++S  +++V V
Sbjct: 224 QGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTV 283

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L++MY  +G   +AE +F  ++ +D+   N MI  Y +   S  A      L  ++ 
Sbjct: 284 INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 343

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN  TF++ +  C     + +GK +H + ++  + R + VGN+++TMYGK    E+AE+
Sbjct: 344 SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 403

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F ++   +++S+  LI GY     G KA+  F      GI  +   +  +    +  ++
Sbjct: 404 VFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSND 463

Query: 377 LE-LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           L   G  LH + I+ G+LSD  +  +L+ +YAK G+L+S+  + +  + K    +NAI++
Sbjct: 464 LHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIA 523

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
             ++      E+ + LF   + AG + D V  +  LS  AS A L  G  LH   +K+G 
Sbjct: 524 ANVQ--LGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGL 581

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +D  V NA + MY KCG +D   Q+    + R    WN ++S YA +G  K A   F++
Sbjct: 582 DSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQ 641

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           M   G  PD ++ + +L AC ++GL + GI  +N +   +G+ P ++H  C+VDLLGR G
Sbjct: 642 MVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLG 701

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           R +EA   I   P   + L+WR+L+S S+   N +     +K+LL+L+P D  +++L+SN
Sbjct: 702 RFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSN 761

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +YA      +  K+R+ M  + ++K   CSW+++ +++  F    + H  +E+IY+KL  
Sbjct: 762 LYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKL-- 819

Query: 736 LNDEMKLKVKD 746
             DEM LK+++
Sbjct: 820 --DEMLLKLRE 828



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 278/570 (48%), Gaps = 13/570 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G A+HA   ++G   + +    L++LY     +  AQ+LF  M  R+ ++WT+L+     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  E  L     M R     N +  + ++  C  LE+ + G Q+ +  I SG +N V V
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 182

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLI+M+ + G   +AE +F  +   D    N MI  Y+  G     F VF  +     
Sbjct: 183 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+  T  +++SVC  +     G  +H L ++  +   ++V NA+V MY   G   +AE 
Sbjct: 243 RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 302

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  +S R+LISW  +IS YV++ +   A+    +        +    ++ +  CS    
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 362

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G  +H   ++     ++ +G +L+ +Y K   ++ A  +           +N ++ G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGG 422

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYSIKTGY 495
           +   + +D    M +FS  R AG++P+ +T   +  S ++S      GR LHAY I+TG+
Sbjct: 423 Y--AVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGF 480

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +D  V N+LITMYAKCG+++ +  IF  I++++IVSWNA+++A    G G+ AL LF +
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFID 540

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV----DLL 611
           M+  G   D + +   L +C      E G+ L        G++  L+  + +V    D+ 
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHG-----LGMKSGLDSDSYVVNAAMDMY 595

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           G+ G++ E + ++           W TL+S
Sbjct: 596 GKCGKMDEMLQVVPDQAIRPQQ-CWNTLIS 624



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 208/421 (49%), Gaps = 8/421 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +   S     G  +H+  L+S   +     N L+N+Y+   +L  A+ LF  M  R 
Sbjct: 252 LMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRD 311

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+W ++I  Y+ + +    L     ++ + E  N  T S  L ACS     I G+ +HA
Sbjct: 312 LISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHA 371

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             ++   + N+ VG SLI+MY       +AE VF+ +   D+   N +I  Y    +   
Sbjct: 372 IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTK 431

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVI-SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           A  VF  + S+  +PN  T  N+  S    N     G+ LH   ++ G + +  V N+++
Sbjct: 432 AMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLI 491

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
           TMY K G  E +  +F++I+ +N++SW A+I+  V+ GHG +A+  F++    G   D  
Sbjct: 492 TMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRV 551

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           CLA  +  C+  ++LE G+QLHG  +K G  SD  +  A +D+Y K G +     ++   
Sbjct: 552 CLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQ 611

Query: 423 SCKYTAEFNAILSGFME--KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
           + +    +N ++SG+ +     + EE     F Q    G +PD VTF  LLS + S A L
Sbjct: 612 AIRPQQCWNTLISGYAKYGYFKEAEET----FKQMVATGRKPDYVTFVALLS-ACSHAGL 666

Query: 481 V 481
           V
Sbjct: 667 V 667



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 189/396 (47%), Gaps = 8/396 (2%)

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG----KQLHGLAVKFGVV 292
           + G    AF +   +       + +   ++++ C E  G +EG      +H L  + G++
Sbjct: 18  RCGRDGTAFEMLRGMRERGVPLSGFALASLVTAC-ERRGRDEGIACGAAIHALTHRAGLM 76

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
             + +G A++ +YG  G+  +A+R+F  + ERN++SWTAL+     +G+  +A+  + + 
Sbjct: 77  GNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQM 136

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
              G+ C+++  ATV+  C    N   GLQ+    I  G  + V +  +L+ ++   G +
Sbjct: 137 RRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRV 196

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             A  L D      T  +NA++S +  +    +    ++FS  R  G+ PD  T   L+S
Sbjct: 197 HDAEKLFDRMEEHDTISWNAMISMYSHQGICSK--CFLVFSDMRHHGLRPDATTLCSLMS 254

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
           + AS      G  +H+  +++   + V V NAL+ MY+  G +  A  +F  +S RD++S
Sbjct: 255 VCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLIS 314

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           WN M+S+Y  +     AL    ++     +P+ ++    L AC   G    G  +   + 
Sbjct: 315 WNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVL 374

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
           Q+   R +L   + ++ + G+   + +A  +  S P
Sbjct: 375 QLSLQRNLLVGNS-LITMYGKCNSMEDAEKVFQSMP 409


>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 985

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 222/691 (32%), Positives = 365/691 (52%), Gaps = 16/691 (2%)

Query: 71  SGDLKLGQAVHAFLLK----SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           +  L+  + +HA LL     SGS++  F  NN+I++Y++   L+ A ++FD M  R+ ++
Sbjct: 292 TTSLQEARQLHALLLTTTNASGSKS-AFLYNNIISMYSRCGSLEDAHQVFDKMPQRTHVS 350

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKF----NEHTCSVILEACSLLEDRIFGEQIH 182
           + +L+  Y    +   V   A ++Y   E      +  T + +L+A SL  D + G  +H
Sbjct: 351 YNALLAAYSRVSEQHCVY--AFNLYTQMENMGLRPSNMTITSLLQAASLHGDLLIGLLLH 408

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A ++K GF N++ V TSL++MY        AE+VF  +  +D    N +IL Y K  + E
Sbjct: 409 AKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIE 468

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
              ++F+ ++   F P  YTF  ++S C        G+ +H   +   V  ++ + NA+V
Sbjct: 469 KGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALV 528

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-CDS 361
            MY   G ++ A  +F  + + +L+SW ++ISGY  +  G KA+N F++   L     D 
Sbjct: 529 DMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDD 588

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
              A +I           G  LHG  IK G++  V +G+ LV +Y K  + ++A  +   
Sbjct: 589 YTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCS 648

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    +  +++G+  K+AD    +   FS+      E D    S +LS+ A  A L 
Sbjct: 649 IPGKDAILWTEMITGY-SKMADGMGAIRC-FSEMHHEVHEIDDYVLSGVLSVCAYLAILR 706

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           +G  +H Y+ K GY  ++ V  +LI MYAK G+++ A+ +F  +S  D+  WN+ML  ++
Sbjct: 707 QGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFS 766

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HG+   AL LFEE+ ++G  PD ++ L +L AC +S L E G  L+N +  I GL P  
Sbjct: 767 HHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSI-GLVPGP 825

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKRLL 660
           +H++CMV LL RA  L EA  +IN SP+ E  + LWRTL+S   +  N K  + A++ +L
Sbjct: 826 KHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVL 885

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
               +D  + IL+SN+YA  G  DE A++R  M  L + KE G SWIE  + +H F +  
Sbjct: 886 RFNAEDGPTLILLSNLYAAAGRWDEVAEIRRNMKGLIMEKEPGLSWIEAKNDIHVFSSGD 945

Query: 721 KDHPESEEIYSKLDLLNDEMKLKVKDSSAFE 751
           + HP+ +++ ++L  L   M     D S  +
Sbjct: 946 QSHPKVDQVQAELHRLKGNMIRTENDDSEVQ 976


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 212/666 (31%), Positives = 339/666 (50%), Gaps = 31/666 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +H  +LK G   D F  N L+N+Y K + L  A KLFD M  R+ I++ +LI+GY +
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
              +   + +   ++R   + N    + IL+    ++    G  IHA   K G E+N FV
Sbjct: 117 SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFV 176

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GT+LI  Y   G    A  VF G+ YKD+     M+  + +    + A  +F  +    F
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +PN++TF +V   C      + GK +HG A+K     ++ VG A++ +Y K G  ++A  
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARX 296

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            F+ I ++++I W+ +I+ Y +S    +A+  F +     +  +    A+V+  C+    
Sbjct: 297 AFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEG 356

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL-DGFSCKYTAEFNAILS 435
           L LG Q+H   IK G  SDV +  AL+D+YAK G ++++  L  +         +N ++ 
Sbjct: 357 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIV 416

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G ++    D E  + LF       ++   VT+S  L   AS A L  G  +H+ ++KT +
Sbjct: 417 GHVQ--LGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTF 474

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             D++V NALI MYAKCGSI  A  +F  ++ +D VSWNAM+S Y++HGL          
Sbjct: 475 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL---------- 524

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
                             AC  +GL + G   F  + Q +G+ P +EH+ CMV LLGR G
Sbjct: 525 ------------------ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGG 566

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
            L +A+ LI+  PF  S ++WR L+    +  + +   ++++ +L++EP+D  + +L+SN
Sbjct: 567 HLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSN 626

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           MYA     D  A VR  M    + KE G SWIE    +H F      HPE   I   L+ 
Sbjct: 627 MYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEW 686

Query: 736 LNDEMK 741
           L+ + K
Sbjct: 687 LHMKTK 692



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 200/364 (54%), Gaps = 1/364 (0%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           +LG  +HA + K G +++ F    LI+ Y+   R+DVA+++FDG+L +  ++WT ++  +
Sbjct: 156 ELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCF 215

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
            ++  ++  L +   M     K N  T + + +AC  LE    G+ +H  A+KS +E ++
Sbjct: 216 AENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDL 275

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           +VG +L+ +Y  SG   +A   F  +  KDV   +FMI  Y ++ +S+ A  +F  +  +
Sbjct: 276 YVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQA 335

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              PN +TF +V+  C    G+  G Q+H   +K G+  ++ V NA++ +Y K G  E +
Sbjct: 336 LVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENS 395

Query: 315 ERMFDAISERNLIS-WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
             +F     RN ++ W  +I G+V+ G G KA+  FL  L+  +       ++ +  C+ 
Sbjct: 396 MXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACAS 455

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + LE GLQ+H   +K  +  D+ +  AL+D+YAK G +K AR++ D  + +    +NA+
Sbjct: 456 LAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAM 515

Query: 434 LSGF 437
           +SG+
Sbjct: 516 ISGY 519



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 230/493 (46%), Gaps = 11/493 (2%)

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
           S  +FN H  +  L+ C   ++   G+ +H   +K G   ++F    L++MY  S    +
Sbjct: 32  SPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCD 91

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  +F  +  ++      +I  Y ++     A  +FV L     E N + FT ++ +   
Sbjct: 92  ASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVS 151

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
               E G  +H    K G      VG A++  Y   G  + A  +FD I  ++++SWT +
Sbjct: 152 MDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGM 211

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           ++ +  +    +A+  F +   +G   ++   A+V   C      ++G  +HG A+K  Y
Sbjct: 212 VTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRY 271

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
             D+ +G AL+D+Y K GD+  AR   +    K    ++ +++ + +  +D  ++ + +F
Sbjct: 272 ELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQ--SDQSKEAVEMF 329

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            Q R A + P+  TF+ +L   A+   L  G  +H + IK G  +DV V NAL+ +YAKC
Sbjct: 330 FQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKC 389

Query: 513 GSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           G ++ +  +F     R D+  WN ++  +   G G+ AL LF  M        +++    
Sbjct: 390 GRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSA 449

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA---MNLINSSP 628
           L+AC      E G+ + +   +    + I+   A ++D+  + G + +A    +L+N   
Sbjct: 450 LRACASLAALEPGLQIHSLTVKTTFDKDIVVTNA-LIDMYAKCGSIKDARLVFDLMN--- 505

Query: 629 FSESPLLWRTLVS 641
             +  + W  ++S
Sbjct: 506 -KQDEVSWNAMIS 517


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 219/680 (32%), Positives = 360/680 (52%), Gaps = 22/680 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL  G+++HA++++SG +  +  AN L+++Y     +  A  LF+ M  R  ++W + I
Sbjct: 142 GDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAI 200

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
                 GD +  L +   M     +    T  + L  C+ +        IH+   +SG E
Sbjct: 201 AANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLE 257

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             + V T+L S Y   G   +A+ VF   A +DV   N M+  Y + G    A  +F  +
Sbjct: 258 QTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           L     P+  T  N  + C     +  G+ +H  A++ G+ R+I +GNA++ MY + G  
Sbjct: 318 LHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSP 374

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           EEA  +F+ I   N +SW  +I+G  + G   +A+  F      G+    +    +++  
Sbjct: 375 EEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLE-- 431

Query: 372 SVCSNLEL------GLQLHGFAIKHGYLSDVRLGTALVDIYAKGG--DLKSARMLLDGFS 423
           +V SN E       G +LH   +  GY S+  +GTA+V +YA  G  D  +A        
Sbjct: 432 AVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAME 491

Query: 424 CKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
            ++    +NAI+S   +      +  +  F +  L G+ P+ +T   +L   A  A L  
Sbjct: 492 DRHDVVSWNAIISSLSQH--GHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTE 549

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYA 541
           G  +H +   +G  ++V V  AL +MY +CGS++ A +IF+ ++ +RD+V +NAM++AY+
Sbjct: 550 GVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYS 609

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            +GL   AL LF  M++EG  PD+ S + VL AC + GL++ G  +F  + Q YG+ P  
Sbjct: 610 QNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSE 669

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           +H+AC VD+LGRAG L++A  LI       + L+W+TL+   +   +     LA+  + +
Sbjct: 670 DHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRE 729

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           L+P D  +++++SN+ AG G  DEAA+VRT M    L K+AG SWIEI S++H FVA  +
Sbjct: 730 LDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDR 789

Query: 722 DHPESEEIYSKLDLLNDEMK 741
            HP SEEIY +L+ L+ E++
Sbjct: 790 SHPRSEEIYRELERLHAEIR 809



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 171/645 (26%), Positives = 312/645 (48%), Gaps = 26/645 (4%)

Query: 63  QLVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
            LV++   +GD +L   G+ +HA ++  G + +    N+L+ LY K   L   +++F  +
Sbjct: 31  HLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRL 88

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            VR   +WT++I  Y + G  +  + +   M +   + +  T   +L+AC+ L D   G 
Sbjct: 89  EVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGR 148

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            IHA+ ++SG E    +   L+ +Y   GC   A  +F  +  +D+   N  I    ++G
Sbjct: 149 SIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSG 207

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           + +MA  +F  +      P   T    +SVC +   + + + +H +  + G+ + + V  
Sbjct: 208 DLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVST 264

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+ + Y + G  ++A+ +FD  +ER+++SW A++  Y + GH  +A   F   L  GI  
Sbjct: 265 ALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGI-- 322

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 T+++  + CS+L  G  +H  A++ G   D+ LG AL+D+Y + G  + AR L 
Sbjct: 323 -PPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF 381

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA- 478
           +G      + +N +++G  +K     +  + LF + +L GM P   T+  LL   AS   
Sbjct: 382 EGIPGNAVS-WNTMIAGSSQK--GQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPE 438

Query: 479 ---CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK--GISDR-DIVS 532
               +  GR LH+  +  GYA++  +G A++ MYA CG+ID A   F+   + DR D+VS
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           WNA++S+ + HG GK AL  F  M   G AP+ I+ + VL AC  +     G+ + + + 
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLR 558

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV--SKLMANSK 650
              G+   +     +  + GR G L  A  +          +++  +++      +A   
Sbjct: 559 H-SGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEA 617

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
             +    +     P D  SF+ V +  +  G+ DE  ++  +M  
Sbjct: 618 LKLFWRMQQEGSRP-DEQSFVSVLSACSHGGLADEGWEIFRSMRQ 661



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           P    RLL  +     L +GR +HA  +  G   ++  GN L+ +Y KC S+    ++F 
Sbjct: 29  PAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFS 86

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG-LSE 582
            +  RD  SW  +++AY  HG  K A+ +F  M++EG   D ++ L VL+AC   G LS+
Sbjct: 87  RLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQ 146

Query: 583 G 583
           G
Sbjct: 147 G 147


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 218/681 (32%), Positives = 355/681 (52%), Gaps = 9/681 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           + +LV+ S  SG    G+  HA ++K+      F  NN +NLY+K+  +  AQKLFD M 
Sbjct: 12  YTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMS 71

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            RS I++  LI GY   G Y   +G+  +   +  K ++ + + +L AC  ++D   G+ 
Sbjct: 72  ERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKV 131

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH  AI  G    VF+   LI MY        A  +F      D    N +I  Y + G 
Sbjct: 132 IHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGA 191

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG--VEEGKQLHGLAVKFGVVREISVG 298
            E    + V +  +    N +T  + +  CY NL   V  GK LHG  VK G+  +I VG
Sbjct: 192 YEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVG 251

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK-----AINGFLEFL 353
            A++ MY K G   +A ++F     +N++ + A+I+G++++    K     A+  F +  
Sbjct: 252 TALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQ 311

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
             GI       +++I  C+     E G Q+H    KH   SD  +G+ L+++Y+  G  +
Sbjct: 312 RQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTE 371

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
                 +         +  +++G+ +      E  + LF +   +G +PD    + +LS 
Sbjct: 372 DQLKCFNSTPKLDIVSWTTMIAGYAQN--GQFESALALFYELLASGKKPDEFIITTMLSA 429

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            A  A    G  +H Y++KTG     IV N+ I+MYAK G++D A   F+ I + D+VSW
Sbjct: 430 CADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSW 489

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           + M+ + A HG  K A+ LFE MK  G  P+ I+ LGVL AC + GL E G+  +  +++
Sbjct: 490 SVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKK 549

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            Y ++  ++H  C+VDLL RAGRL +A N I +S F + P++WRTL+S  ++  +     
Sbjct: 550 DYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGK 609

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
             +++L++L+P+++ S++L+ N+Y   G+   A K+R  M D  + KE G SWIE+ +++
Sbjct: 610 HVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEV 669

Query: 714 HHFVASGKDHPESEEIYSKLD 734
           H FV     HP S+ IY KL+
Sbjct: 670 HSFVVGDISHPMSQIIYKKLE 690



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 35/409 (8%)

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           + S F  +   +T ++    ++     GK  H   +K      + + N  + +Y K G  
Sbjct: 1   MPSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEM 60

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
             A+++FD +SER++IS+  LISGY   G   KAI  F E     +  D    A V+  C
Sbjct: 61  GNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSAC 120

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
               +  LG  +HG AI  G    V L   L+D+Y K   +  AR+L +         +N
Sbjct: 121 GQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWN 180

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR-------GR 484
           ++++G+    A   E+++ L  +    G+  +  T       SA ++C +        G+
Sbjct: 181 SLITGYARVGA--YEEMLKLLVKMHHTGLRLNAFTLG-----SALKSCYLNLNNMVSYGK 233

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY-ALH 543
           +LH Y++K G   D++VG AL+ MYAK G +  A Q+F+   ++++V +NAM++ +    
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTE 293

Query: 544 GLGK----GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG------ICLFN-EIE 592
            + K     AL LF +M+R+G  P D +   +++ C +    E G      IC  N + +
Sbjct: 294 DIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSD 353

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +  G        + +++L    G   + +   NS+P     + W T+++
Sbjct: 354 EFIG--------STLIELYSLLGSTEDQLKCFNSTP-KLDIVSWTTMIA 393


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 194/674 (28%), Positives = 364/674 (54%), Gaps = 9/674 (1%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            G+ +HA  +K G   + F  ++LINLY K   +  A+K+FD    ++ + W +++ G++ 
Sbjct: 343  GRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQ 402

Query: 137  DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            +   E  + +   M R++ + ++ T   +L AC  L     G Q+H   IK+G + ++FV
Sbjct: 403  NELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFV 462

Query: 197  GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              +++ MY   G    A+ +F  +  KD    N +I+      E   A ++   +     
Sbjct: 463  ANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGI 522

Query: 257  EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
              ++ +F   I+ C     +E GKQ+H  ++K+ V    +VG++++ +Y K G  E + +
Sbjct: 523  ALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRK 582

Query: 317  MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            +   +   +++   ALI+G V++    +AI  F + L  G    +    +++ GC+   +
Sbjct: 583  VLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVS 642

Query: 377  LELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAIL 434
              +G Q+H + +K   L+ D  LG +LV IY K   L+ A  LL+     K   E+ A +
Sbjct: 643  SVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATI 702

Query: 435  SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
            SG+ +     +   +V+F + R   +  D  TF+ +L   +  A L  G+ +H   +K+G
Sbjct: 703  SGYAQNGYSVQS--LVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSG 760

Query: 495  YAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLF 553
            + +     +AL+ MY+KCG +  +F+IFK + +R +I+ WN+M+  +A +G    ALLLF
Sbjct: 761  FVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLF 820

Query: 554  EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            ++M+     PDD+++LGVL AC ++GL   G+  F+ + Q+YG+ P ++H+AC++DLLGR
Sbjct: 821  QKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGR 880

Query: 614  AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
             G L +A  +I+  PF    ++W T ++  ++  + +   +A+K+L+++EP+ + +++ +
Sbjct: 881  GGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFL 940

Query: 674  SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
            S+++A  G   EA   R  M +  + K  GCSWI + +K   FV     HP++  IY  L
Sbjct: 941  SSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSIYKML 1000

Query: 734  D----LLNDEMKLK 743
            D    ++N + ++K
Sbjct: 1001 DDLTGMMNKDGRIK 1014



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 264/517 (51%), Gaps = 4/517 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++      G  +   A+ + + K GS  D      +I+  A   RL  A+ L   + 
Sbjct: 226 WTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIR 285

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           + S + W ++I  Y   G    V G+  DM +        T + IL A + +     G Q
Sbjct: 286 MTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQ 345

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA A+K G + NVFVG+SLI++Y   GC  +A+ VF     K++   N ++  + +   
Sbjct: 346 IHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNEL 405

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E    +F ++  +D E +D+TF +V+  C     ++ G+Q+H + +K G+  ++ V NA
Sbjct: 406 QEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANA 465

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K G  + A+ +F  I  ++ +SW ALI G   +   G+AIN        GI  D
Sbjct: 466 MLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALD 525

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               AT I+ CS    +E G Q+H  +IK+   S+  +G++L+D+Y+K GD++S+R +L 
Sbjct: 526 EVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLA 585

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                     NA+++G ++   + E++ + LF Q    G +P   TF+ +LS        
Sbjct: 586 HVDASSIVPINALITGLVQN--NREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSS 643

Query: 481 VRGRSLHAYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLS 538
           V G+ +H Y++K+     D  +G +L+ +Y KC  ++ A ++ + + D +++V W A +S
Sbjct: 644 VIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATIS 703

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            YA +G    +L++F  M+      D+ +   VL+AC
Sbjct: 704 GYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKAC 740



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/562 (24%), Positives = 267/562 (47%), Gaps = 56/562 (9%)

Query: 31  TFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGS-----------------GD 73
           T +P   +  + + S  + S S R +L  D  Q ++ SIGS                 G 
Sbjct: 115 TGAPASSAAASSVLSCHARSGSPRDVL--DAFQRIRCSIGSTPDQFGIAVVLSACSRLGA 172

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VH  +LKSG  +  F    L+++YAK   +D A+++FDG+     I WTS+I G
Sbjct: 173 LEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAG 232

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G Y+  L +   M +     ++ TC  I+                           
Sbjct: 233 YHRVGRYQQALALFSRMEKMGSVPDQVTCVTII--------------------------- 265

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
               ++L SM    G   +A  + + +        N +I  Y+++G     F ++  +  
Sbjct: 266 ----STLASM----GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKK 317

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P   TF +++S        +EG+Q+H  AVK G+   + VG++++ +Y KHG   +
Sbjct: 318 QGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISD 377

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+++FD  +E+N++ W A++ G+V++    + I  F       +  D     +V+  C  
Sbjct: 378 AKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACIN 437

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +L+LG Q+H   IK+G  +D+ +  A++D+Y+K G +  A+ L      K +  +NA+
Sbjct: 438 LYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNAL 497

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + G      ++E + + +  + +  G+  D V+F+  ++  ++   +  G+ +H+ SIK 
Sbjct: 498 IVGLAHN--EEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKY 555

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
              ++  VG++LI +Y+K G ++ + ++   +    IV  NA+++    +     A+ LF
Sbjct: 556 NVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELF 615

Query: 554 EEMKREGFAPDDISILGVLQAC 575
           +++ ++GF P + +   +L  C
Sbjct: 616 QQVLKDGFKPSNFTFTSILSGC 637



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 198/476 (41%), Gaps = 68/476 (14%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVN----------F 230
           +HA  ++ G      +G +L+ +Y  SG          G A++ + C             
Sbjct: 75  LHARILRLGLPLRGRLGDALVDLYGRSGRV--------GYAWRALACCTGAPASSAAASS 126

Query: 231 MILEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
           ++  + ++G        F  +  S    P+ +    V+S C     +E G+Q+H   +K 
Sbjct: 127 VLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS 186

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           G    +     +V MY K G  ++A RMFD I+                           
Sbjct: 187 GFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIA--------------------------- 219

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
                   C D+ C  ++I G       +  L L     K G + D      ++   A  
Sbjct: 220 --------CPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASM 271

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G L  AR LL       T  +NA+++ + +   D E  V  L+   +  G+ P   TF+ 
Sbjct: 272 GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSE--VFGLYKDMKKQGLMPTRSTFAS 329

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +LS +A+      GR +HA ++K G  A+V VG++LI +Y K G I  A ++F   ++++
Sbjct: 330 ILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKN 389

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI--YS---GLSEGG 584
           IV WNA+L  +  + L +  + +F+ M+R     DD + + VL ACI  YS   G     
Sbjct: 390 IVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHC 449

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           I + N      G+   L     M+D+  + G +  A  L +  P  +S + W  L+
Sbjct: 450 ITIKN------GMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDS-VSWNALI 498


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 241/778 (30%), Positives = 380/778 (48%), Gaps = 82/778 (10%)

Query: 19  SLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQ 78
           SLP LK K P+   +        +  S +S +    + LF+        S+ S +L    
Sbjct: 4   SLPRLKPKPPLLFLT-------TFFFSTASSTTDLTSTLFHQCK-----SLASAEL---- 47

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNR----LDVAQKLFDGMLVRSAITWTSLIKGY 134
            +H  LL  G  +D     ++I++Y  FN     L V ++L       +   W  LI+  
Sbjct: 48  -IHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPS--SHTVFWWNQLIRRS 101

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           +  G  E VL +   M R   + + +T   +L+AC  +     G  +HA    SGFE NV
Sbjct: 102 VHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNV 161

Query: 195 FVGTSLISMYFHSGCFREAENVF---RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           FVG  L+SMY   G +  A  VF   R     D+   N ++  Y + G+S  A  +F  +
Sbjct: 162 FVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERM 221

Query: 252 LSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
                  P+  +  NV+  C        GKQ+HG A++ G+  ++ VGNA+V MY K GM
Sbjct: 222 TEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGM 281

Query: 311 SEEAERMF------DAIS-----------------------------ERNLISWTALISG 335
            EEA ++F      D +S                             E N+++W+A+I+G
Sbjct: 282 MEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAG 341

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK------ 389
           Y + G G +A++ F +    G   +   L +++ GC++   L  G + H  AIK      
Sbjct: 342 YAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLD 401

Query: 390 -HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK--YTAEFNAILSGFMEKIADDEE 446
            +    D+ +  AL+D+Y+K    K+AR + D    K      +  ++ G  +    +  
Sbjct: 402 ENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH--GEAN 459

Query: 447 DVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-AADVIVGN 503
           + + LFSQ  Q    + P+  T S  L   A    L  GR +HAY ++  + +A + V N
Sbjct: 460 EALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVAN 519

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
            LI MY+K G +D A  +F  +  R+ VSW ++++ Y +HG G+ AL +F EM++ G  P
Sbjct: 520 CLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVP 579

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           D ++ + VL AC +SG+ + GI  FN + + +G+ P  EH+ACMVDLL RAGRL EAM L
Sbjct: 580 DGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMEL 639

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
           I   P   +P +W  L+S  ++ AN +    A+ +LL+LE  + GS+ L+SN+YA     
Sbjct: 640 IRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCW 699

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            + A++R  M +  + K  GCSW++       F A    HP S++IY   DLL D M+
Sbjct: 700 KDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIY---DLLRDLMQ 754


>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
 gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 237/772 (30%), Positives = 371/772 (48%), Gaps = 106/772 (13%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           KLG+ VHA  +K+G   D F    L+ +YA+   L  A  LF+ M +R+  +W +++  Y
Sbjct: 76  KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVY 135

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           LD G +E    +   +     + +     ++ +ACS L     G Q+H   IK  F  N+
Sbjct: 136 LDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNI 195

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---------------------L 233
           +V  +LI MY   G   +A+ V   +  +D    N +I                     L
Sbjct: 196 YVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSL 255

Query: 234 EYN---------------KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
           +Y+               + G  E A  +   +      PN  T   V+  C     ++ 
Sbjct: 256 DYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDL 315

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGK------------------------------- 307
           GKQLHG   +   +    V NA+V +Y +                               
Sbjct: 316 GKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCE 375

Query: 308 HGMSEEAERMFDAIS----ERNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSS 362
            G   +A+ +FD +     ER LISW ++ISGYVR+    +A + F   L + GI  DS 
Sbjct: 376 SGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSF 435

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            L +V+  C+   +L  G ++H  AI  G  SD  +G ALV++Y+K  DL +A++  D  
Sbjct: 436 TLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEV 495

Query: 423 SCKYTAEFNAILSGF------------MEKIADDE---------------------EDVM 449
             K    +NA++SG+            +EK+  D                      +  M
Sbjct: 496 MEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTM 555

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
            LFS+ +++ + PD  T   +L   +  A L RG+  HA+SIK GY  DV +G AL+ MY
Sbjct: 556 QLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMY 615

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           AKCGS+  A   +  IS+ ++VS NAML+A A+HG G+  + LF+ M   GF PD ++ L
Sbjct: 616 AKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFL 675

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
            VL +C++ G  E G C F ++   Y ++P L+H+  MVDLL R+G+L EA  LI   P 
Sbjct: 676 SVLSSCVHVGSVETG-CEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPV 734

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
               +LW  L+       N +   +A++RL++LEP ++G+++L++N++A      + A+V
Sbjct: 735 ECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARV 794

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           R  M D  + K  GCSWIE  +++H F+A  + H  +EEIY+ LD L   MK
Sbjct: 795 RGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLALHMK 846



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 237/517 (45%), Gaps = 78/517 (15%)

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
           +  N    + +L++C   +    G+Q+HA  IK+GF+ + F+ T L+ MY   G  ++A+
Sbjct: 58  KPLNTSKYASVLDSCKCPK---LGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDAD 114

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
            +F  +  +++     ++  Y   G  E AF +F  L     E + + F  V   C    
Sbjct: 115 FLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLG 174

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER---------- 324
            VE G+QLHGL +KF     I V NA++ MYGK G  ++A+++   + ER          
Sbjct: 175 SVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVIT 234

Query: 325 --------------------------NLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
                                     N++SW+A+I G+ ++G+  +AI         G+ 
Sbjct: 235 ACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLV 294

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            ++  LA V+  C+    L+LG QLHG+  +H ++S+  +  ALVD+Y + GD+  A  +
Sbjct: 295 PNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKI 354

Query: 419 LDGFSCKYT-----------------------------------AEFNAILSGFMEKIAD 443
              FS K                                       +N+I+SG++     
Sbjct: 355 FLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMF 414

Query: 444 DEEDVMVLFSQQRL-AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           DE     +F    +  G+EPD  T   +L+  A    L +G+ +HA +I  G  +D  VG
Sbjct: 415 DE--AFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVG 472

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
            AL+ MY+KC  +  A   F  + ++D+ +WNA++S Y      +    L E+MK +G+ 
Sbjct: 473 GALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYH 532

Query: 563 PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           P+  +   +L   + +   +  + LF+E+ QI  LRP
Sbjct: 533 PNIYTWNSILAGLVENRQLDLTMQLFSEM-QISKLRP 568



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 149/603 (24%), Positives = 254/603 (42%), Gaps = 132/603 (21%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P + K   G G ++LG+ +H  ++K     + + +N LI++Y K   LD A+K+   M 
Sbjct: 163 FPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMP 222

Query: 121 VRSAITWTSLIKGYLDDG-----------------------DYESVLGIACDMYRSEEKF 157
            R ++TW S+I     +G                        + +V+G        EE  
Sbjct: 223 ERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAI 282

Query: 158 -------------NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
                        N  T + +L AC+ L+    G+Q+H +  +  F +N  V  +L+ +Y
Sbjct: 283 EMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVY 342

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES----------------------- 241
              G    A  +F   + K+V   N MI+ Y ++G+                        
Sbjct: 343 RRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWN 402

Query: 242 ------------EMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
                       + AF +F ++L  +  EP+ +T  +V++ C + + + +GK++H  A+ 
Sbjct: 403 SIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIV 462

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS--------- 339
            G+  +  VG A+V MY K      A+  FD + E+++ +W ALISGY RS         
Sbjct: 463 KGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYL 522

Query: 340 -----GHG--------GKAINGFLEFLDLGICC-------------DSSCLATVIDGCSV 373
                G G           + G +E   L +               D   +  ++  CS 
Sbjct: 523 LEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSR 582

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + LE G Q H  +IK GY +DV +G ALVD+YAK G LK A++  D  S       NA+
Sbjct: 583 LATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAM 642

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           L+     +    E+ + LF      G  PD VTF  +LS     +C      +H  S++T
Sbjct: 643 LTAC--AMHGHGEEGISLFQTMLALGFIPDHVTFLSVLS-----SC------VHVGSVET 689

Query: 494 GYAADVIVG-----------NALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYA 541
           G     ++G            +++ + ++ G +  A+++ K +  + D V W A+L    
Sbjct: 690 GCEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCV 749

Query: 542 LHG 544
            HG
Sbjct: 750 THG 752



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 144/289 (49%), Gaps = 10/289 (3%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           ++S  A+V+D C  C   +LG Q+H   IK G+ +D  + T L+ +YA+ G LK A  L 
Sbjct: 61  NTSKYASVLDSCK-CP--KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLF 117

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    +    + AILS +++      E+  +LF   +  G+E D   F  +    +    
Sbjct: 118 ETMPMRNLHSWKAILSVYLDH--GLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGS 175

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           +  GR LH   IK  +  ++ V NALI MY KCGS+D A ++   + +RD V+WN++++A
Sbjct: 176 VELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITA 235

Query: 540 YALHGLGKGALLLFEEMKREGFA-PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            A +G+   AL   E+MK   ++ P+ +S   V+     +G  E  I +   + Q+ GL 
Sbjct: 236 CAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRM-QVEGLV 294

Query: 599 PILEHFACMVDLLGRAGRLSEAMNL---INSSPFSESPLLWRTLVSVSK 644
           P  +  A ++    R  RL     L   I    F  +P++   LV V +
Sbjct: 295 PNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYR 343



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 20/257 (7%)

Query: 450 VLFSQQR----LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
           V  SQQ+     + ++  P+  S+  S+  S  C   G+ +HA++IKTG+ AD  +   L
Sbjct: 41  VNISQQKNRSNFSLLDNKPLNTSKYASVLDSCKCPKLGKQVHAHTIKTGFDADGFIDTKL 100

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           + MYA+CG +  A  +F+ +  R++ SW A+LS Y  HGL + A LLF+ ++ +G   D 
Sbjct: 101 LQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDF 160

Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYGL----RPILEHFA--CMVDLLGRAGRLSE 619
                V +AC   G  E G        Q++GL    R  L  +    ++D+ G+ G L +
Sbjct: 161 FVFPLVFKACSGLGSVELG-------RQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDD 213

Query: 620 AMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
           A  ++   P  +S + W ++++   +  M       L   + LD    +  S+  V   +
Sbjct: 214 AKKVLVKMPERDS-VTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGF 272

Query: 678 AGQGMLDEAAKVRTTMN 694
           A  G  +EA ++   M 
Sbjct: 273 AQNGYDEEAIEMLFRMQ 289


>gi|15241649|ref|NP_196466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171897|sp|Q9FNN9.1|PP370_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g08490
 gi|9759343|dbj|BAB09998.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332003927|gb|AED91310.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 849

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 212/751 (28%), Positives = 379/751 (50%), Gaps = 55/751 (7%)

Query: 48  SVSCSERTLLF------NDWPQ--------LVKISIGSGDLKLGQAVHAFLLKSGSQNDT 93
           SVSC   T+ F       D P+        ++ + +  GD   G+++H++++K+G + DT
Sbjct: 98  SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDT 157

Query: 94  FEANNLINLYAKFNRL-DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
              N L+++YAKF  +   A   FDG+  +  ++W ++I G+ ++          C M +
Sbjct: 158 LVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK 217

Query: 153 SEEKFNEHTCSVILEACSLLEDRIF---GEQIHAFAI-KSGFENNVFVGTSLISMYFHSG 208
              + N  T + +L  C+ ++  I    G QIH++ + +S  + +VFV  SL+S Y   G
Sbjct: 218 EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVI 267
              EA ++F  +  KD+   N +I  Y    E   AF +F +L+   D  P+  T  +++
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337

Query: 268 SVCYENLGVEEGKQLHGLAVKFG-VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
            VC +   +  GK++H   ++   ++ + SVGNA+++ Y + G +  A   F  +S +++
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           ISW A++  +  S    + +N     L+  I  DS  + +++  C     +    ++HG+
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGY 457

Query: 387 AIKHGYLSD---VRLGTALVDIYAKGGDLKSARMLLDGFSCKYT-AEFNAILSGFMEKIA 442
           ++K G L D    +LG AL+D YAK G+++ A  +  G S + T   +N++LSG++   +
Sbjct: 458 SVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGS 517

Query: 443 DDEEDVMV-----------------------------LFSQQRLAGMEPDPVTFSRLLSL 473
            D+  ++                              +F + +  GM P+ VT   LL +
Sbjct: 518 HDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPV 577

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            A  A L   R  H Y I+ G   D+ +   L+ +YAKCGS+  A+ +F+  + RD+V +
Sbjct: 578 CAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMF 636

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            AM++ YA+HG GK AL+++  M      PD + I  +L AC ++GL + G+ +++ I  
Sbjct: 637 TAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRT 696

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
           ++G++P +E +AC VDL+ R GRL +A + +   P   +  +W TL+             
Sbjct: 697 VHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGH 756

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
             +  LL  E  D G+ +L+SNMYA     +   ++R  M    + K AGCSW+E+D + 
Sbjct: 757 SVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQR 816

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMKLKV 744
           + FV+    HP  + I+  ++ L  +MK  V
Sbjct: 817 NVFVSGDCSHPRRDSIFDLVNALYLQMKEPV 847



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 161/547 (29%), Positives = 268/547 (48%), Gaps = 18/547 (3%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +VK      DL  G+A+H  + K G    +  + +++N+YAK  R+D  QK+F  M    
Sbjct: 27  VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W  ++ G       E++       +  E K +  T +++L  C  L D   G+ +H+
Sbjct: 87  PVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHS 146

Query: 184 FAIKSGFENNVFVGTSLISMYFHSG-CFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           + IK+G E +  VG +L+SMY   G  F +A   F G+A KDV   N +I  +++     
Sbjct: 147 YIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMA 206

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCY---ENLGVEEGKQLHGLAVKFGVVR-EISVG 298
            AF  F  +L    EPN  T  NV+ VC    +N+    G+Q+H   V+   ++  + V 
Sbjct: 207 DAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVC 266

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-I 357
           N++V+ Y + G  EEA  +F  +  ++L+SW  +I+GY  +    KA   F   +  G +
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSAR 416
             DS  + +++  C+  ++L  G ++H + ++H Y L D  +G AL+  YA+ GD  +A 
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
                 S K    +NAIL  F +  +  +   + L        +  D VT   LL    +
Sbjct: 387 WAFSLMSTKDIISWNAILDAFAD--SPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCIN 444

Query: 477 QACLVRGRSLHAYSIKTGYAAD---VIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVS 532
              + + + +H YS+K G   D     +GNAL+  YAKCG+++ A +IF G+S+ R +VS
Sbjct: 445 VQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVS 504

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           +N++LS Y   G    A +LF EM         + +    ++C         I +F EI 
Sbjct: 505 YNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCC----PNEAIGVFREI- 559

Query: 593 QIYGLRP 599
           Q  G+RP
Sbjct: 560 QARGMRP 566



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 16/334 (4%)

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           L S F  +   F +V+  C     +  G+ LHG   K G +    V  +++ MY K    
Sbjct: 13  LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72

Query: 312 EEAERMFDAISERNLISWTALISGY-VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
           ++ ++MF  +   + + W  +++G  V  G         + F D      S   A V+  
Sbjct: 73  DDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPK-PSSVTFAIVLPL 131

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL-KSARMLLDGFSCKYTAE 429
           C    +   G  +H + IK G   D  +G ALV +YAK G +   A    DG + K    
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191

Query: 430 FNAILSGFMEK--IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ----ACLVRG 483
           +NAI++GF E   +AD      ++  +      EP+  T + +L + AS     AC   G
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEP----TEPNYATIANVLPVCASMDKNIACR-SG 246

Query: 484 RSLHAYSIKTGY-AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           R +H+Y ++  +    V V N+L++ Y + G I+ A  +F  +  +D+VSWN +++ YA 
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306

Query: 543 HGLGKGALLLFEEMKREG-FAPDDISILGVLQAC 575
           +     A  LF  +  +G  +PD ++I+ +L  C
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVC 340



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           L+G   D   F  ++   AS + L  GR+LH    K G+ A   V  +++ MYAKC  +D
Sbjct: 14  LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK-REGFAPDDISILGVLQAC 575
              ++F+ +   D V WN +L+  ++   G+  +  F+ M   +   P  ++   VL  C
Sbjct: 74  DCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132

Query: 576 IYSGLSEGG 584
           +  G S  G
Sbjct: 133 VRLGDSYNG 141


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 215/692 (31%), Positives = 363/692 (52%), Gaps = 26/692 (3%)

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           AVHA ++++      F  N L+  Y +      A++L D M   +A+++  LI  Y   G
Sbjct: 35  AVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAG 92

Query: 139 DYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
             E+ L       RS   + +  T +  L ACS       G+ +HA ++  G    VFV 
Sbjct: 93  QPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVS 152

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            SL+SMY   G   +A  VF     +D    N ++  Y +AG  +    VF  +  S   
Sbjct: 153 NSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIG 212

Query: 258 PNDYTFTNVISVCY--ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            N +   +VI  C   ++  ++    +HG  VK G   ++ + +A+V MY K G   EA 
Sbjct: 213 LNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAV 272

Query: 316 RMFDAISERNLISWTALISGYVRSGHG------GKAINGFLEFLDLGICCDSSCLATVID 369
            +F ++ + N++ + A+I+G  R           +A++ + E    G+       ++VI 
Sbjct: 273 ALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIR 332

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC----- 424
            C++  ++E G Q+HG  +KH +  D  +G+AL+D+Y   G ++      DGF C     
Sbjct: 333 ACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCME------DGFRCFTSVP 386

Query: 425 -KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    + A++SG ++   +  E  + LF +   AG++PDP T S +++  AS A    G
Sbjct: 387 KQDVVTWTAMISGCVQN--ELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTG 444

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             +  ++ K+G+     +GN+ I MYA+ G +  A + F+ +   DIVSW+A++S++A H
Sbjct: 445 EQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQH 504

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G  + AL  F EM      P++I+ LGVL AC + GL + G+  +  +++ Y L P ++H
Sbjct: 505 GCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKH 564

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
             C+VDLLGRAGRL++A   I  S F + P++WR+L++  ++  + +   L + R+++L+
Sbjct: 565 CTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQ 624

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P  + S++ + N+Y   G L  A+K+R  M +  + KE G SWIE+ S +H FVA  K H
Sbjct: 625 PSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSH 684

Query: 724 PESEEIYSKL-DLLNDEMKLKVKDSSAFELQD 754
           PES  IYSKL ++L+   KL   D+S+ +  D
Sbjct: 685 PESNAIYSKLAEMLSKIDKLTATDASSTKSDD 716



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 242/484 (50%), Gaps = 14/484 (2%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+ G+AVHA  +  G     F +N+L+++YA+   +  A+++FD    R  ++W +L
Sbjct: 127 AGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNAL 186

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF--GEQIHAFAIKS 188
           + GY+  G  + +L +   M RS    N      +++ C+  +D +      +H   +K+
Sbjct: 187 VSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKA 246

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI--LEYNKAGES----E 242
           GF+++VF+ ++++ MY   G   EA  +F+ +   +V   N MI  L  ++A        
Sbjct: 247 GFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLR 306

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  ++  + S   EP ++TF++VI  C     +E GKQ+HG  +K     +  +G+A++
Sbjct: 307 EALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALI 366

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +Y   G  E+  R F ++ ++++++WTA+ISG V++    +A+  F E L  G+  D  
Sbjct: 367 DLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPF 426

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +++V++ C+  +    G Q+  FA K G+     +G + + +YA+ GD+ +A       
Sbjct: 427 TISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEM 486

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                  ++A++S   +       D +  F++   A + P+ +TF  +L+ + S   LV 
Sbjct: 487 ESHDIVSWSAVISSHAQHGC--ARDALRFFNEMVDAKVVPNEITFLGVLT-ACSHGGLVD 543

Query: 483 GRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSI-DGAFQIFKGISDRDIVSWNAMLSA 539
               +  ++K  YA    + +   ++ +  + G + D    I   I   + V W ++L++
Sbjct: 544 EGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLAS 603

Query: 540 YALH 543
             +H
Sbjct: 604 CRIH 607


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 178/490 (36%), Positives = 298/490 (60%), Gaps = 2/490 (0%)

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           S  F PN++TF  V+  C   L ++ G ++H L VK G   ++ V  ++V +Y K G  E
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A ++FD I ++N++SWTA+ISGY+  G   +AI+ F   L++ +  DS  +  V+  C+
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +L  G  +H   ++ G + +V +GT+LVD+YAK G+++ AR + DG   K    + A
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++ G+   +    ++ + LF Q +   ++PD  T   +LS  A    L  G  +     +
Sbjct: 285 MIQGY--ALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDR 342

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
             +  + ++G ALI +YAKCGS+  A+++FKG+ ++D V WNA++S  A++G  K +  L
Sbjct: 343 NEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGL 402

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F ++++ G  PD  + +G+L  C ++GL + G   FN + + + L P +EH+ CMVDLLG
Sbjct: 403 FGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLG 462

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG L EA  LI + P   + ++W  L+   ++  +++ + LA K+L++LEP ++G+++L
Sbjct: 463 RAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVL 522

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+Y+     DEAAKVR +MN+ R+ K  GCSWIE+D  +H F+   K HP SE+IY+K
Sbjct: 523 LSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAK 582

Query: 733 LDLLNDEMKL 742
           LD L  +MK+
Sbjct: 583 LDELTKKMKV 592



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 227/462 (49%), Gaps = 8/462 (1%)

Query: 86  KSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLG 145
           + G  +D +  N ++     F+  +  + LF  +   +   W ++I+G + +  ++  + 
Sbjct: 39  RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98

Query: 146 IACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
               + RSE    N  T   +L+AC+ L D   G +IH   +K GF+ +VFV TSL+ +Y
Sbjct: 99  FY-GLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLY 157

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
              G   +A  VF  +  K+V     +I  Y   G+   A  +F  LL  +  P+ +T  
Sbjct: 158 AKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIV 217

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
            V+S C +   +  G+ +H   ++ G+VR + VG ++V MY K G  E+A  +FD + E+
Sbjct: 218 RVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEK 277

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           +++SW A+I GY  +G   +AI+ FL+     +  D   +  V+  C+    LELG  + 
Sbjct: 278 DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVS 337

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
           G   ++ +L +  LGTAL+D+YAK G +  A  +  G   K    +NAI+SG    +   
Sbjct: 338 GLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGL--AMNGY 395

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN- 503
            +    LF Q    G++PD  TF  LL    + A LV     +  S+   ++    + + 
Sbjct: 396 VKISFGLFGQVEKLGIKPDGNTFIGLLC-GCTHAGLVDEGRRYFNSMYRFFSLTPSIEHY 454

Query: 504 -ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
             ++ +  + G +D A Q+ + +  + + + W A+L A  +H
Sbjct: 455 GCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH 496



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 178/369 (48%), Gaps = 13/369 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+LG  +H  ++K G   D F   +L+ LYAK   L+ A K+FD +  ++ ++WT++I 
Sbjct: 127 DLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIIS 186

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFN----EHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           GY+  G +      A DM+R   + N      T   +L AC+ L D   GE IH   ++ 
Sbjct: 187 GYIGVGKFRE----AIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEM 242

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G   NVFVGTSL+ MY   G   +A +VF G+  KD+     MI  Y   G  + A  +F
Sbjct: 243 GMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLF 302

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           + +   + +P+ YT   V+S C     +E G+ + GL  +   +    +G A++ +Y K 
Sbjct: 303 LQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKC 362

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A  +F  + E++ + W A+ISG   +G+   +   F +   LGI  D +    ++
Sbjct: 363 GSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL 422

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
            GC+    ++ G +      +   L+  +     +VD+  + G L  A  L+        
Sbjct: 423 CGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMP---- 478

Query: 428 AEFNAILSG 436
            E NAI+ G
Sbjct: 479 MEANAIVWG 487


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 203/679 (29%), Positives = 348/679 (51%), Gaps = 8/679 (1%)

Query: 66  KISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
           +I +    + L + +HA L+ SG     F +  LIN YA    +  A+  FD +  +   
Sbjct: 48  RIFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVY 107

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLEDRIFGEQIHAF 184
           TW S+I  Y   G + + +    +   +    ++H T   ++ AC  L+D   G ++H  
Sbjct: 108 TWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCL 164

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +K GFE +V++  S I  Y   G    A N+F  +  +D+   N MI  +   G+   A
Sbjct: 165 VLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEA 224

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             VF  +       +  T ++++ +C +   +  G  +H  A+K G+  ++ V NA++ M
Sbjct: 225 LEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINM 284

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G    AE +F+ +  R+++SW +L++ + ++     A+  + +   +G+  D   L
Sbjct: 285 YAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTL 344

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKH-GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            ++    +   N      +HGF  +   +L D+ LG A++D+YAK G + SAR + +G  
Sbjct: 345 VSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLP 404

Query: 424 CKYTAEFNAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
            K    +N++++G+ +  +A++  DV    S +  +G  P+  T+  +L+  +    L +
Sbjct: 405 VKDVISWNSLITGYSQNGLANEAIDVYS--SMRYYSGAVPNQGTWVSILTAHSQLGALKQ 462

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G   H   IK     D+ V   L+ MY KCG +  A  +F  +  +  VSWNA++S + L
Sbjct: 463 GMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGL 522

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG G  A+ LF+EM+ EG  PD I+ + +L AC +SGL + G   F  +++ YG+RP L+
Sbjct: 523 HGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLK 582

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ CMVDL GRAG L +A N + + P      +W  L+   ++  N +     S  LL +
Sbjct: 583 HYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKV 642

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           E ++ G ++L+SN+YA  G  +   +VR+   D  L K  G S IE+D K+  F    + 
Sbjct: 643 ESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQT 702

Query: 723 HPESEEIYSKLDLLNDEMK 741
           HP+ EEIYS+L  L  +MK
Sbjct: 703 HPKCEEIYSELRNLTAKMK 721



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 201/439 (45%), Gaps = 20/439 (4%)

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E  +  F  +   C +   V   KQLH L V  G  + I +   ++  Y   G    A  
Sbjct: 40  EKREIDFNRIFLYCTK---VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARL 96

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-ICCDSSCLATVIDGCSVCS 375
            FD I  +++ +W ++IS Y R GH   A++ F EFL    +  D      VI     C 
Sbjct: 97  TFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRA---CG 153

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           NL+ G ++H   +K G+  DV +  + +  Y++ G +  A  L D    +    +NA++S
Sbjct: 154 NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMIS 213

Query: 436 GFM--EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           GF    K+A+  E    +F + R   +  D VT S LL +      ++ G  +H Y+IK 
Sbjct: 214 GFYLNGKVAEALE----VFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKL 269

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G   D+ V NALI MYAK G +  A  IF  +  RDIVSWN++L+A+  +     AL ++
Sbjct: 270 GLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVY 329

Query: 554 EEMKREGFAPDDISILGVLQACIYSG--LSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
            +M   G  PD ++++ +       G  LS   I  F    + + L  I    A ++D+ 
Sbjct: 330 NKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGF-VTRRCWFLHDIALGNA-IIDMY 387

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGS 669
            + G +  A  +    P  +  + W +L++      +AN    + +S R       + G+
Sbjct: 388 AKLGFIDSARKVFEGLPVKDV-ISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGT 446

Query: 670 FILVSNMYAGQGMLDEAAK 688
           ++ +   ++  G L +  K
Sbjct: 447 WVSILTAHSQLGALKQGMK 465



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 7/357 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ I +   D+  G  +H + +K G + D F  N LIN+YAKF  L  A+ +F+ M VR 
Sbjct: 246 LLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRD 305

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W SL+  +  +      LG+   M+      +  T   +    + L + +    IH 
Sbjct: 306 IVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHG 365

Query: 184 FAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           F  +   F +++ +G ++I MY   G    A  VF GL  KDV   N +I  Y++ G + 
Sbjct: 366 FVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLAN 425

Query: 243 MAFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
            A  V+  +   S   PN  T+ ++++   +   +++G + HG  +K  +  +I V   +
Sbjct: 426 EAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCL 485

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V MYGK G   +A  +F  +  ++ +SW A+IS +   G+G KA+  F E    G+  D 
Sbjct: 486 VDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDH 545

Query: 362 SCLATVIDGCSVCSNLELG---LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
               +++  CS    ++ G    QL      +G    ++    +VD++ + G L+ A
Sbjct: 546 ITFVSLLSACSHSGLVDEGQWCFQL--MQETYGIRPSLKHYGCMVDLFGRAGHLEKA 600


>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 651

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 209/618 (33%), Positives = 323/618 (52%), Gaps = 4/618 (0%)

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
           TW S  +  ++ G  ++ L +   M +S    N  T   +L+AC+ L      + IHA  
Sbjct: 20  TWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHV 79

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           +KS F++N+FV T+ + MY   G   +A NVF  +  +D+   N M+L + ++G  +   
Sbjct: 80  LKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLS 139

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +  H+  S   P+  T   +I        +     ++   ++ GV  ++SV N ++  Y
Sbjct: 140 CLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAY 199

Query: 306 GKHGMSEEAERMFDAISE--RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            K G    AE +FD I+   R+++SW ++I+ Y       KA+N +   LD G   D S 
Sbjct: 200 SKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDIST 259

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           +  ++  C     L  GL +H   +K G  SDV +   L+ +Y+K GD+ SAR L +G S
Sbjct: 260 ILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMS 319

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K    +  ++S + EK    E   M LF+    AG +PD VT   L+S       L  G
Sbjct: 320 DKTCVSWTVMISAYAEKGYMSE--AMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELG 377

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +  YSI  G   +V+V NALI MYAKCG  + A ++F  +++R +VSW  M++A AL+
Sbjct: 378 KWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALN 437

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G  K AL LF  M   G  P+ I+ L VLQAC + GL E G+  FN + Q YG+ P ++H
Sbjct: 438 GDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDH 497

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           ++CMVDLLGR G L EA+ +I S PF     +W  L+S  KL    +     S++L +LE
Sbjct: 498 YSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELE 557

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P+ A  ++ ++N+YA   M +  A +R  M  L++ K  G S I+++ K   F    +DH
Sbjct: 558 PQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTIFTVEDRDH 617

Query: 724 PESEEIYSKLDLLNDEMK 741
           PE+  IY  LD L    K
Sbjct: 618 PETLYIYDMLDGLTSRSK 635



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 226/488 (46%), Gaps = 6/488 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K       L+  Q +HA +LKS  Q++ F     +++Y K  RL+ A  +F  M 
Sbjct: 56  FPFVLKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMP 115

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           VR   +W +++ G+   G  + +  +   M  S  + +  T  +++++   ++       
Sbjct: 116 VRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGA 175

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKA 238
           +++F I+ G   +V V  +LI+ Y   G    AE +F  +    + V   N MI  Y   
Sbjct: 176 VYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANF 235

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            +   A + +  +L   F P+  T  N++S C +   +  G  +H   VK G   ++ V 
Sbjct: 236 EKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVV 295

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N ++ MY K G    A  +F+ +S++  +SWT +IS Y   G+  +A+  F      G  
Sbjct: 296 NTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEK 355

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D   +  +I GC     LELG  +  ++I +G   +V +  AL+D+YAK G    A+ L
Sbjct: 356 PDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKEL 415

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               + +    +  +++     +  D +D + LF      GM+P+ +TF  +L   A   
Sbjct: 416 FYTMANRTVVSWTTMITAC--ALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGG 473

Query: 479 CLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAM 536
            + RG    +  + K G    +   + ++ +  + G +  A +I K +  + D   W+A+
Sbjct: 474 LVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSAL 533

Query: 537 LSAYALHG 544
           LSA  LHG
Sbjct: 534 LSACKLHG 541



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 159/352 (45%), Gaps = 35/352 (9%)

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
            L +W +     V  GH   A+  F +    GI  ++S    V+  C+  S+L     +H
Sbjct: 17  TLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIH 76

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
              +K  + S++ + TA VD+Y K G L+ A  +      +  A +NA+L GF +    D
Sbjct: 77  AHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLD 136

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
              +  L    RL+G+ PD VT   L+        L    +++++ I+ G   DV V N 
Sbjct: 137 R--LSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANT 194

Query: 505 LITMYAKCGSIDGAFQIFKGISD--RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
           LI  Y+KCG++  A  +F  I+   R +VSWN+M++AYA       A+  ++ M   GF+
Sbjct: 195 LIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFS 254

Query: 563 PDDISILGVLQAC-----IYSGL---SEGG--------------ICLFNEIEQIYGLRPI 600
           PD  +IL +L +C     ++ GL   S G               IC++++   ++  R +
Sbjct: 255 PDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFL 314

Query: 601 LE--------HFACMVDLLGRAGRLSEAMNLINS-SPFSESPLLWRTLVSVS 643
                      +  M+      G +SEAM L N+     E P L   L  +S
Sbjct: 315 FNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALIS 366



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 13/243 (5%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+LG+ +  + + +G +++    N LI++YAK    + A++LF  M  R+ ++WT++
Sbjct: 371 TGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTM 430

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRI--FGEQIHAFA 185
           I     +GD +  L +   M     K N  T   +L+AC+   L+E  +  F      + 
Sbjct: 431 ITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYG 490

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK-AGESEMA 244
           I  G ++     + ++ +    G  REA  + + + ++    +   +L   K  G+ EM 
Sbjct: 491 INPGIDHY----SCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMG 546

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            +V   L   + EP        ++  Y +  + EG       +K+  VR+ S G +I+ +
Sbjct: 547 KYVSEQLF--ELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRK-SPGQSIIQV 603

Query: 305 YGK 307
            GK
Sbjct: 604 NGK 606


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 212/727 (29%), Positives = 375/727 (51%), Gaps = 22/727 (3%)

Query: 34  PNPKSQVAYLCSISSVSCS-----ERTLLFND------WP------QLVKISIGSGDLKL 76
           P P S VA+   IS  +       E   L+ D      WP       ++  +  +     
Sbjct: 159 PAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIE 218

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VHA  ++ G   + F  ++LINLYAK   +  A  +FD    ++ + W +++ G + 
Sbjct: 219 GRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVR 278

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +      + +   M R   + +E T   +L AC+ L+    G Q+    IK+  + ++FV
Sbjct: 279 NEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFV 338

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             + + M+   G   +A+ +F  + YKD    N +++      E E A H+   +     
Sbjct: 339 ANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGV 398

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P++ +F  VI+ C      E GKQ+H LA+K  +    +VG++++  Y KHG  E   +
Sbjct: 399 TPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRK 458

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +   +   +++    LI+G V++    +AI+ F + L  G+   S   ++++ GC+   +
Sbjct: 459 VLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLS 518

Query: 377 LELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSA-RMLLDGFSCKYTAEFNAIL 434
             +G Q+H + +K G+L+D   +G +LV  Y K    + A ++L++    K   E+ AI+
Sbjct: 519 SIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIV 578

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           SG+ +     +   ++ F + R   + PD VTF+ +L   +    L  G+ +H   IK+G
Sbjct: 579 SGYAQNGYSYQS--LLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSG 636

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHGLGKGALLLF 553
           + +     +A+I MY+KCG I  +F+ FK + S +DI  WN+M+  +A +G    ALLLF
Sbjct: 637 FGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLF 696

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           ++M+      D+++ LGVL AC ++GL   G   F+ + ++YG+ P ++H+AC +DLLGR
Sbjct: 697 QKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGR 756

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
            G L EA  +IN  PF    ++W T ++  ++  + +   +A+K L++LEP+++ +++L+
Sbjct: 757 GGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLL 816

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SNMYA  G   EA   R  M +   +K  GCSWI + +K   F+   K+H  +  IY  L
Sbjct: 817 SNMYAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEML 876

Query: 734 DLLNDEM 740
           D L   M
Sbjct: 877 DNLTRMM 883



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 150/543 (27%), Positives = 268/543 (49%), Gaps = 17/543 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++     +G  +    +   + K GS  D      ++       RL+ A+ L   M 
Sbjct: 100 WASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMP 159

Query: 121 V-RSAITWTSLIKGYLDDGDYE-SVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
              S + W ++I GY      E  V G+  DM          T + +L A +     I G
Sbjct: 160 APSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEG 219

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+HA A++ G + NVFVG+SLI++Y   GC  +A  VF     K+V   N M+    + 
Sbjct: 220 RQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRN 279

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
                A  +F+++     E +++T+ +V+  C        G+Q+  + +K  +   + V 
Sbjct: 280 EYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVA 339

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GI 357
           NA + M+ K G  ++A+ +F+ I+ ++ +SW AL+ G   +    +AI+  L+ ++L G+
Sbjct: 340 NATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIH-MLKGMNLDGV 398

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D    ATVI+ CS     E G Q+H  A+KH   S+  +G++L+D Y+K GD++S R 
Sbjct: 399 TPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRK 458

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +L           N +++G ++   + E++ + LF Q    G++P   TFS +LS     
Sbjct: 459 VLAQVDASSIVPRNVLIAGLVQN--NREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGL 516

Query: 478 ACLVRGRSLHAYSIKTGYAA-DVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNA 535
              + G+ +H Y++K+G+   D  VG +L+  Y K    + A ++   + D +++V W A
Sbjct: 517 LSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTA 576

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQI 594
           ++S YA +G    +LL F  M+     PD+++   +L+AC   + LS+G        ++I
Sbjct: 577 IVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDG--------KEI 628

Query: 595 YGL 597
           +GL
Sbjct: 629 HGL 631



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 188/415 (45%), Gaps = 39/415 (9%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           +  L ACS L   + G+Q H  A K G  +  F   +L++MY   G   +A  VF G++ 
Sbjct: 35  AATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISL 94

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
            D  C   MI  Y++AG  + A  +F  +      P+  T                    
Sbjct: 95  PDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCV------------------ 136

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI-SERNLISWTALISGYV-RSG 340
                            A+V      G  E+A  +   + +  + ++W A+ISGY  +SG
Sbjct: 137 -----------------AVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSG 179

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +    + +    G+    S  A+++   +  +    G Q+H  A++HG  ++V +G+
Sbjct: 180 IEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGS 239

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           +L+++YAK G +  A ++ D    K    +NA+L+G +      E   M L+  +RL G+
Sbjct: 240 SLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLY-MKRL-GL 297

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           E D  T+  +L   A       GR +   +IK    A + V NA + M++K G+ID A  
Sbjct: 298 EADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKT 357

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +F  I+ +D VSWNA+L     +   + A+ + + M  +G  PD++S   V+ AC
Sbjct: 358 LFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINAC 412



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 39/323 (12%)

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ +     +S C     +  GKQ H  A K G+        A+V MY + G   +A R
Sbjct: 28  RPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARR 87

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS-SCLATVIDGCSVCS 375
           +F  IS  + + W ++ISGY R+G   +A+  F     +G   D  +C+A V   C++  
Sbjct: 88  VFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV---CAL-- 142

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFNAIL 434
                                   TAL       G L+ AR LL        T  +NA++
Sbjct: 143 ------------------------TAL-------GRLEDARTLLHRMPAPSSTVAWNAVI 171

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           SG+ ++ +  E +V  L+   R  G+ P   TF+ +LS +A+    + GR +HA +++ G
Sbjct: 172 SGYAQQ-SGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHG 230

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             A+V VG++LI +YAKCG I  A  +F    ++++V WNAML+    +     A+ +F 
Sbjct: 231 LDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFL 290

Query: 555 EMKREGFAPDDISILGVLQACIY 577
            MKR G   D+ + + VL AC +
Sbjct: 291 YMKRLGLEADEFTYVSVLGACAH 313



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 36/183 (19%)

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G+ PD    +  LS  +    LV G+  H  + K G  +      AL+ MYA+CG +  A
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F GIS  D V W +M+S Y   G  + A+ LF  M++ G +PD ++ + V+  C  +
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV--CALT 143

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
            L                                  GRL +A  L++  P   S + W  
Sbjct: 144 AL----------------------------------GRLEDARTLLHRMPAPSSTVAWNA 169

Query: 639 LVS 641
           ++S
Sbjct: 170 VIS 172



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 39/221 (17%)

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D   LA  +  CS    L  G Q H  A K G  S      ALV++YA+ G +  A
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R +  G S   T  + +++SG+    A   ++ + LF++    G  PD VT         
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHR--AGRFQEAVCLFTRMEKMGSSPDRVT--------- 134

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWN 534
              C+                       A++      G ++ A  +   + +    V+WN
Sbjct: 135 ---CV-----------------------AVVCALTALGRLEDARTLLHRMPAPSSTVAWN 168

Query: 535 AMLSAYALH-GLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           A++S YA   G+      L+++M+  G  P   +   +L A
Sbjct: 169 AVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSA 209


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 218/745 (29%), Positives = 379/745 (50%), Gaps = 18/745 (2%)

Query: 10  LQPPFKSQQSL--PPLKKKVPINTFSPNPKSQVAYLCSISSV--------SCSERTLLFN 59
           L PPF+  + +            + + NP S +  LC + ++        S  E  +   
Sbjct: 46  LHPPFRKAKHICVSNSATTTTSLSSNHNPNSHIYQLCLLGNLDRAMSYLDSMHELRIPVE 105

Query: 60  D--WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           D  +  L+++       K G  V++++  S S       N L++++ +F  L  A  +F 
Sbjct: 106 DDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFG 165

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  R+  +W  L+ GY   G ++  L +   M     K + +T   +L  C  + + + 
Sbjct: 166 RMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVR 225

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G +IH   I+ GFE++V V  +LI+MY   G    A  VF  +  +D    N MI  Y +
Sbjct: 226 GREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFE 285

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREIS 296
            G       +F  ++    +P+  T T+VI+ C E LG +  G+Q+HG  ++    R+ S
Sbjct: 286 NGVCLEGLRLFGMMIKYPVDPDLMTMTSVITAC-ELLGDDRLGRQIHGYVLRTEFGRDPS 344

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           + N+++ MY   G+ EEAE +F     R+L+SWTA+ISGY       KA+  +      G
Sbjct: 345 IHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEG 404

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  D   +A V+  CS   NL++G+ LH  A + G +S   +  +L+D+YAK   +  A 
Sbjct: 405 IMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKAL 464

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            +      K    + +I+ G   +I +   + +  F ++ +  ++P+ VT   +LS  A 
Sbjct: 465 EIFHSTLEKNIVSWTSIILGL--RINNRCFEALFFF-REMIRRLKPNSVTLVCVLSACAR 521

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L  G+ +HA++++TG + D  + NA++ MY +CG ++ A++ F  + D ++ SWN +
Sbjct: 522 IGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNIL 580

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           L+ YA  G G  A  LF+ M     +P++++ + +L AC  SG+   G+  FN ++  Y 
Sbjct: 581 LTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYS 640

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P L+H+AC+VDLLGR+G+L EA   I   P    P +W  L++  ++  + +   LA+
Sbjct: 641 IMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAA 700

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           + +   +    G +IL+SN+YA  G  D+ A+VR  M    L  + GCSW+E+   +H F
Sbjct: 701 ENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAF 760

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
           ++S   HP+ +EI + L+    +MK
Sbjct: 761 LSSDNFHPQIKEINALLERFYKKMK 785


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 205/667 (30%), Positives = 351/667 (52%), Gaps = 7/667 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKF--NRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
            H    KSG  +  + ANN++  Y+K     L++A KLFD M  +  +TW ++I GY++ 
Sbjct: 21  THCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVES 80

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G+  +       M R   + + +T   IL+  +       G+Q+H+  +K G+E +V+ G
Sbjct: 81  GNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAG 140

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           ++L+ MY       +A +VF+G+  ++    N +I  + + G+ + AF +   +      
Sbjct: 141 SALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVR 200

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
             D TF  ++++   +   +   QLH   +K G+    ++ NA +T Y + G+ E+A+R+
Sbjct: 201 VEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRV 260

Query: 318 FD-AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           FD A+  R+L++W +++  Y+       A N FLE    G   D      VI  C   ++
Sbjct: 261 FDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAH 320

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAK--GGDLKSARMLLDGFSCKYTAEFNAIL 434
              G   H   IK G    V +  AL+ +Y K     +++A  L      K    +N+IL
Sbjct: 321 KNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSIL 380

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +GF +      ED + LF   R +  E D   +S +L   +  A L  G+ +H  ++KTG
Sbjct: 381 TGFSQ--MGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTG 438

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           + ++  V ++LI MY+KCG I+ A++ F+  +    ++WN+++ AYA HG G  AL LF 
Sbjct: 439 FDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFS 498

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
            M+      D ++ + VL AC + GL E G C+   +E  YG+ P +EH+AC VDL GRA
Sbjct: 499 IMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRA 558

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G L EA  LI+S PF  + ++ +TL+   +   N + +   + +LL++EP++  +++++S
Sbjct: 559 GYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILS 618

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           NMY      D+ A V   M + ++ K  G SWIE+ +++H F A  + HP SE++Y  L 
Sbjct: 619 NMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYSEDVYQILG 678

Query: 735 LLNDEMK 741
            L +EMK
Sbjct: 679 ELMEEMK 685



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 215/415 (51%), Gaps = 11/415 (2%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           LGQ VH+ ++K G +   +  + L+++YAK  R++ A  +F GM VR+ ++W +LI G++
Sbjct: 120 LGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFV 179

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE---QIHAFAIKSGFEN 192
             GD ++   +   M +   +  + T + +L   +LL+   F +   Q+H   IK G E 
Sbjct: 180 QVGDRDTAFWLLDCMQKEGVRVEDGTFAPLL---TLLDGDKFYKLTMQLHCKIIKHGLEF 236

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRG-LAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
              +  + ++ Y   G   +A+ VF G +  +D+   N M++ Y    + E AF++F+ +
Sbjct: 237 YNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEM 296

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK--HG 309
               FEP+ YT+T VIS C+       GK  H L +K G+   +++ NA++TMY K  + 
Sbjct: 297 QGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNK 356

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E A  +F ++  ++ +SW ++++G+ + G    A+  F          D    + V+ 
Sbjct: 357 SMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLR 416

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS  + L+LG Q+H   +K G+ S+  + ++L+ +Y+K G ++ A    +  + + +  
Sbjct: 417 SCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSIT 476

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           +N+I+  + +    D    + LFS  R   ++ D VTF  +L+  +    + +GR
Sbjct: 477 WNSIMFAYAQHGQGDV--ALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGR 529



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LGQ +H   +K+G  ++ F A++LI +Y+K   ++ A K F+     S+ITW S++  
Sbjct: 424 LQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFA 483

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           Y   G  +  L +   M   E K +  T   +L ACS
Sbjct: 484 YAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACS 520


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 203/692 (29%), Positives = 346/692 (50%), Gaps = 49/692 (7%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + VHA     G   +   AN LI  Y+ +  LD A  LFDGM VR +++W+ ++ G+   
Sbjct: 98  RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 157

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           GDY +  G   ++ R   + + +T   ++ AC  L++                     + 
Sbjct: 158 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN---------------------LQ 196

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +L+ MY       +A  +F  +  +D+     MI  Y + G++  +  +F  +      
Sbjct: 197 MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+      V+  C +   + + + +     +     ++ +G A++ MY K G  E A  +
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD + E+N+ISW+A+I+ Y   G G KA++ F   L  G+  D   LA+++  C  C NL
Sbjct: 317 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNL 376

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
               Q+H  A  HG L ++ +   LV  Y+    L  A  L DG   + +  ++ ++ GF
Sbjct: 377 TQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGF 436

Query: 438 MEKIAD---------------------------DEEDVMVLFSQQRLAGMEPDPVTFSRL 470
             K+ D                           +  + +VLF + R  G+ PD V    +
Sbjct: 437 -AKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTV 495

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           +   A    + + R++  Y  +  +  DVI+G A+I M+AKCG ++ A +IF  + ++++
Sbjct: 496 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNV 555

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           +SW+AM++AY  HG G+ AL LF  M R G  P+ I+++ +L AC ++GL E G+  F+ 
Sbjct: 556 ISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSL 615

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           + + Y +R  ++H+ C+VDLLGRAGRL EA+ LI S    +   LW   +   +   +  
Sbjct: 616 MWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVV 675

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            +  A+  LL+L+P++ G +IL+SN+YA  G  ++ AK R  M+  RL K  G +WIE+D
Sbjct: 676 LAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVD 735

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
           +K H F      HP S+EIY  L  L ++++L
Sbjct: 736 NKSHQFSVGDTTHPRSKEIYEMLKSLGNKLEL 767



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 166/381 (43%), Gaps = 29/381 (7%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G +   + +  ++ +   Q D      +I++YAK   ++ A+++FD M  ++ I+W+++I
Sbjct: 273 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 332

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y   G     L +   M  S    ++ T + +L AC    +     Q+HA A   G  
Sbjct: 333 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGML 392

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            N+ V   L+  Y +     +A  +F G+  +D    + M+  + K G+    F  F  L
Sbjct: 393 QNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFREL 452

Query: 252 LSSDFEPNDYTF----------------------------TNVISVCYENLGVEEGKQLH 283
           +     P++YT                               V+  C +   + + + + 
Sbjct: 453 IRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTID 512

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
               +     ++ +G A++ M+ K G  E A  +FD + E+N+ISW+A+I+ Y   G G 
Sbjct: 513 DYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 572

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTAL 402
           KA++ F   L  GI  +   L +++  CS    +E GL+      + +   +DV+  T +
Sbjct: 573 KALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV 632

Query: 403 VDIYAKGGDLKSARMLLDGFS 423
           VD+  + G L  A  L++  +
Sbjct: 633 VDLLGRAGRLDEALKLIESMT 653



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 30/300 (10%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+   I   +L   + VHA     G   +   AN L++ Y+ +  LD A  LFDGM VR 
Sbjct: 366 LLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRD 425

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCS-------------------- 163
           +++W+ ++ G+   GDY +  G   ++ R   + + +T                      
Sbjct: 426 SVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGV 485

Query: 164 --------VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
                    ++ AC+ L        I  +  +  F+ +V +GT++I M+   GC   A  
Sbjct: 486 VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESARE 545

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F  +  K+V   + MI  Y   G+   A  +F  +L S   PN  T  +++  C     
Sbjct: 546 IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 605

Query: 276 VEEGKQLHGLAVK-FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
           VEEG +   L  + + V  ++     +V + G+ G  +EA ++ ++++ E++   W A +
Sbjct: 606 VEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFL 665



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 27/269 (10%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           C NL    Q+H  A  HG L ++ +   L+  Y+    L  A  L DG   + +  ++ +
Sbjct: 91  CRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVM 150

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + GF +    D  +    F +    G  PD  T   ++     +AC    R L    +  
Sbjct: 151 VGGFAK--VGDYINCFGTFRELIRCGARPDNYTLPFVI-----RAC----RDLKNLQM-- 197

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
                     AL+ MY KC  I+ A  +F  + +RD+V+W  M+  YA  G    +L+LF
Sbjct: 198 ----------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 247

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE-QIYGLRPILEHFACMVDLLG 612
           E+M+ EG  PD ++++ V+ AC   G       + + I+ + + L  IL     M+D+  
Sbjct: 248 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG--TAMIDMYA 305

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           + G +  A  + +     ++ + W  +++
Sbjct: 306 KCGCVESAREIFDRME-EKNVISWSAMIA 333


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 191/556 (34%), Positives = 317/556 (57%), Gaps = 10/556 (1%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVF   +LIS Y        A  +F  +   D    N +I  Y + G+++ AF +F+ + 
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +  + + +T + +I+ C  N+G+   +QLH L+V  G+   +SVGNA++T Y K+G  +
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 313 EAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           EA R+F  +SE R+ +SW +++  Y++   G KA+  +LE    G+  D   LA+V+   
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTAEF 430
           +   +L  GLQ H   IK GY  +  +G+ L+D+Y+K GG +   R + D  S      +
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N ++SG+     D  ++ +  F Q ++ G  PD  +   ++S  ++ +   +GR +H  +
Sbjct: 311 NTMISGY-SLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369

Query: 491 IKTGYAADVI-VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           +K    ++ I V NALI MY+KCG++  A  +F  + + + VS+N+M++ YA HG+G  +
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LF+ M   GF P +I+ + VL AC ++G  E G   FN ++Q +G+ P   HF+CM+D
Sbjct: 430 LHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMID 489

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGRAG+LSEA  LI + PF      W  L+   ++  N + +I A+ RLL L+P +A  
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP 549

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           +++++N+Y+  G L +AA VR  M D  + K+ GCSWIE++ ++H FVA    HP  ++I
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKI 609

Query: 730 YSKLDLLNDEMKLKVK 745
              L    +EM  K+K
Sbjct: 610 QEYL----EEMMRKIK 621



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 244/526 (46%), Gaps = 43/526 (8%)

Query: 57  LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL------- 109
           L +++ Q +K  I   DL+ G+++HA  +KS     T+ +N+ + LY+K  RL       
Sbjct: 7   LLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVF 66

Query: 110 ------------------------DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLG 145
                                   +VA +LFD M    ++++ +LI  Y   GD +    
Sbjct: 67  DHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQ 126

Query: 146 IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYF 205
           +  +M  +    +  T S I+ AC +    I   Q+HA ++ +G ++ V VG +LI+ Y 
Sbjct: 127 LFLEMREAFLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYS 184

Query: 206 HSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
            +G  +EA  +F  L+  +D    N M++ Y +  E   A  +++ +       + +T  
Sbjct: 185 KNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLA 244

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-HGMSEEAERMFDAISE 323
           +V++       +  G Q H   +K G  +   VG+ ++ +Y K  G   +  ++FD IS 
Sbjct: 245 SVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN 304

Query: 324 RNLISWTALISGY-VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
            +L+ W  +ISGY +      +A+  F +   +G   D   L  VI  CS  S+   G Q
Sbjct: 305 PDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQ 364

Query: 383 LHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           +HG A+K    S+ + +  AL+ +Y+K G+L+ A+ L D      T  +N++++G+ +  
Sbjct: 365 VHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG 424

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
              +   + LF +    G  P  +TF  +L+  A    +  G+ ++   +K  +  +   
Sbjct: 425 MGFQS--LHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEA 481

Query: 502 GN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           G+   +I +  + G +  A ++ + I  D     W+A+L A  +HG
Sbjct: 482 GHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHG 527



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 138/292 (47%), Gaps = 13/292 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN--RLDVAQKLFDGMLVRSAITWTSL 130
           DL  G   HA L+KSG   ++   + LI+LY+K     LD  +K+FD +     + W ++
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD-CRKVFDEISNPDLVLWNTM 313

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHT--CSVI--LEACSLLEDRIFGEQIHAFAI 186
           I GY     YE +   A + +R  +        CS++  + ACS +     G Q+H  A+
Sbjct: 314 ISGY---SLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370

Query: 187 KSGFENN-VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           K    +N + V  +LI+MY   G  R+A+ +F  +   +    N MI  Y + G    + 
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVGNAIVTM 304
           H+F  +L   F P + TF +V++ C     VE+GK   + +  KFG+  E    + ++ +
Sbjct: 431 HLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDL 490

Query: 305 YGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            G+ G   EAER+ + I  +     W+AL+      G+   AI      L L
Sbjct: 491 LGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQL 542



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 4/130 (3%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
            F + L    +   L  G+SLHA  IK+       + N  + +Y+KC  +  A ++F   
Sbjct: 10  NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
            D ++ S+N ++SAYA     + A  LF+EM +    PD +S   ++ A    G ++   
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ----PDSVSYNTLIAAYARRGDTQPAF 125

Query: 586 CLFNEIEQIY 595
            LF E+ + +
Sbjct: 126 QLFLEMREAF 135


>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 217/714 (30%), Positives = 366/714 (51%), Gaps = 12/714 (1%)

Query: 6   PANLLQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLV 65
           P ++LQ  +    ++P + K   ++ F+        ++ +  S +CS      ND   L 
Sbjct: 21  PLSILQTKYSKGSTVPFVSKLNHLSLFTNKMLRNQHHVYTSKSCNCSSSLSFRNDPTALS 80

Query: 66  KISIGSGDLK---LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
                S + K   LG  +HA ++K G  ND F  NNLI +Y K   L    K+F  M ++
Sbjct: 81  TALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMK 140

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI------ 176
           + ++WT ++ G + +G++E  LG+  +M R+    NE     + +AC+ L   +      
Sbjct: 141 NLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLN 200

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           FG QIH   I+S    +  V  SL+ MYF +G    A  VF  L  KD+   N +    +
Sbjct: 201 FGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLS 260

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           +  ++      F  L+ +  +PN  TF+ +   C E L +  G Q H LA +FG+  E S
Sbjct: 261 QGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEAS 320

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V ++++ M+ + G    A  +FD+   +++ +   +ISGY  + H  +A+N F     LG
Sbjct: 321 VTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLG 380

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D    ++ ++ C    N +LG Q+HG  +K G+ S   + ++L+  Y   G L  + 
Sbjct: 381 LEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSF 440

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
              +G        + A++S  + K    E   + L ++ + AG +PD   F  + +  A 
Sbjct: 441 EFFNGVERLDLVSWGAMISALVHKGYSSE--AIGLLNRLKEAGGKPDEFIFGSIFNCCAG 498

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNA 535
            A   + +S+H+  +K GY A V V +A+I  YAKCG I+ A ++F   S  RD++ +N 
Sbjct: 499 IAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNT 558

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M+ AYA HGL + A+  FE+MK     P   + + V+ AC + GL E G   F  +   Y
Sbjct: 559 MVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDY 618

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           G+ P  +++ C+VDL  R G L +A ++I + PF   P +WR+L++  ++  N +    A
Sbjct: 619 GMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWA 678

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +K+LL L P++  +++L+S +Y+ +G   +AAKVR  M +  L K+ GCSWIEI
Sbjct: 679 AKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWIEI 732


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 193/568 (33%), Positives = 309/568 (54%), Gaps = 7/568 (1%)

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G + H F +K G  ++ FV TSLI MY   G    A  V+  +   D    N +I  Y 
Sbjct: 131 LGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYA 190

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           + G    AF VF+ + +    PN YT++ +++VC     ++EGKQLH   VK   + E +
Sbjct: 191 RNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETA 250

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           VGNA++T+Y K GM EEAE +F+++ +RN+ISWTA I+G+ + G   KA+  F    + G
Sbjct: 251 VGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESG 310

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +    + V+  C    +   G   H   IK G  S V +GTA++D+Y+  G++  A 
Sbjct: 311 IEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAE 370

Query: 417 MLLDGFS-CKYTAEFNAILSGFM--EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
                         +NA+++G++  EKI    E  M  F +     +  +  T+S +   
Sbjct: 371 KQFKQMGRAASNVSWNALIAGYVLNEKI----EKAMEAFCRMVKEDVACNEFTYSNIFKA 426

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +S   L     +H+  IK+   +++ V ++LI  Y +CGS++ A Q+F  ISD D+VSW
Sbjct: 427 CSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSW 486

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           N+++ AY+ +G    A+ L  +M  EG  P   + L VL AC +SGL + G   F  + Q
Sbjct: 487 NSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQ 546

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            Y ++P   H +CMVD+LGRAG+L  A++ I       +  +WR L++  +  +N + + 
Sbjct: 547 DYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAE 606

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
             ++++LDLEP DA  ++ +SNMYA  G   +A   R  M    +SKE GCSWIE+++K+
Sbjct: 607 YVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKM 666

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK 741
           + F +  K HPE  ++Y KL  L  +++
Sbjct: 667 YKFFSHDKAHPEMPKVYEKLKQLVRQIQ 694



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 252/531 (47%), Gaps = 33/531 (6%)

Query: 178  GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
            G  +HA  +  G     +    L+S Y   G    A  +F  +   ++R    +     +
Sbjct: 822  GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881

Query: 238  AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
             G  E A   F  +      PN +   +++  C        G+ +H + +K     +  +
Sbjct: 882  RGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYI 941

Query: 298  GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             +A++ MY K G  E+A R+FD I +++L+   A++SGY + G   +A+B   +    G+
Sbjct: 942  ISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGV 1001

Query: 358  CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
              +     T+I G S   +  +  ++      +G   DV                     
Sbjct: 1002 KPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDV--------------------- 1040

Query: 418  LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
                        + +++SGF++   + E      F +    G  P  VT S LL    + 
Sbjct: 1041 ----------VSWTSVISGFVQNFHNHEG--FDAFKEMLDQGFCPSSVTISSLLPACTNV 1088

Query: 478  ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
            A L  G+ +H Y++  G   DV V +AL+ MYAKCG I  A  +F  + +R+ V+WN+++
Sbjct: 1089 ANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLI 1148

Query: 538  SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
              YA HG    A+ LF +M+      D ++   VL AC ++G+ E G  LF ++++ Y +
Sbjct: 1149 FGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRI 1208

Query: 598  RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
             P LEH+ACMVDLLGRAG+LSEA +LI + P      +W  L+   +   N + + +A++
Sbjct: 1209 EPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAE 1268

Query: 658  RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
             L +LEP+  GS +L+SN+YA  G    AAK++  M   +  K  GCSWIE
Sbjct: 1269 HLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 222/475 (46%), Gaps = 13/475 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G ++LG+  H F++K G  +D F   +LI++YAK   +D A +++D M    A T   LI
Sbjct: 127 GCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLI 186

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y  +G +     +   +     + N +T S +L  C  +     G+Q+HA  +K  + 
Sbjct: 187 SAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYL 246

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +   VG +L+++Y   G   EAE VF  L  +++      I  + + G+ + A   F  +
Sbjct: 247 SETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMM 306

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             S  EPN++TF+ V++ C       +G+  H   +K G+   + VG AI+ MY   G  
Sbjct: 307 RESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEM 366

Query: 312 EEAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
           +EAE+ F  +    + +SW ALI+GYV +    KA+  F   +   + C+    + +   
Sbjct: 367 DEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKA 426

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           CS   +L   +Q+H   IK    S++ + ++L++ Y + G L++A  +    S      +
Sbjct: 427 CSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSW 486

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS----- 485
           N+I+  + +    D    + L  +    G +P   TF  +LS  +    +  G+      
Sbjct: 487 NSIIKAYSQN--GDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSM 544

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSA 539
           +  YSI+     +    + ++ +  + G ++ A    K ++ +   S W  +L+A
Sbjct: 545 VQDYSIQ----PEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAA 595



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 164/321 (51%), Gaps = 4/321 (1%)

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           F    Y F+  +S C     VE G++ H   VK G+  +  V  +++ MY K G  + A 
Sbjct: 110 FPHRQYVFS-ALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAV 168

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           R++D ++  +  +   LIS Y R+G   +A   F++  ++G   +    +T++  C   S
Sbjct: 169 RVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTIS 228

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            ++ G QLH   +K  YLS+  +G AL+ +Y+K G ++ A ++ +    +    + A ++
Sbjct: 229 AIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASIN 288

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           GF +    D +  +  FS  R +G+EP+  TFS +L+        + GR  H   IK G 
Sbjct: 289 GFYQH--GDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGM 346

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGALLLFE 554
           A+ V VG A+I MY+  G +D A + FK +      VSWNA+++ Y L+   + A+  F 
Sbjct: 347 ASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFC 406

Query: 555 EMKREGFAPDDISILGVLQAC 575
            M +E  A ++ +   + +AC
Sbjct: 407 RMVKEDVACNEFTYSNIFKAC 427



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 177/420 (42%), Gaps = 73/420 (17%)

Query: 74   LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            L  G+A+HA L+  G    T+ A  L++ Y +  +L  A+KLFD +   +   W  L   
Sbjct: 819  LYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGA 878

Query: 134  YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
                G YE  L    +M +   + N+     IL+AC  L DR  GE +H   +K+ FE++
Sbjct: 879  CARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESD 938

Query: 194  VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY------------------ 235
             ++ ++LI MY   G   +A  VF  +  KD+  +N M+  Y                  
Sbjct: 939  AYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQ 998

Query: 236  -----------------NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS---------- 268
                             ++ G+  M   VF  + ++  EP+  ++T+VIS          
Sbjct: 999  AGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHE 1058

Query: 269  -------------------------VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
                                      C     +  GK++HG A+  GV +++ V +A+V 
Sbjct: 1059 GFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVD 1118

Query: 304  MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            MY K G   EA+ +F  + ERN ++W +LI GY   G+  +AI  F +  +     D   
Sbjct: 1119 MYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLT 1178

Query: 364  LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLLDG 421
               V++ CS    +ELG  L    ++  Y  + RL     +VD+  + G L  A  L+  
Sbjct: 1179 FTAVLNACSHAGMVELGESLFX-KMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKA 1237



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/394 (22%), Positives = 167/394 (42%), Gaps = 53/394 (13%)

Query: 256  FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            F+ +  T+   I +   +  +  G+ LH   V  G+ R       +++ Y + G    A 
Sbjct: 799  FQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNAR 858

Query: 316  RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            ++FD I   N+  W  L     R G   +A++ F E    G+  +   L +++  C   S
Sbjct: 859  KLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLS 918

Query: 376  NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            +   G  +H   +K+ + SD  + +AL+ +Y+K G ++ A  + D    K     NA++S
Sbjct: 919  DRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVS 978

Query: 436  GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
            G+ +     E   +V   QQ  AG++P+ V++                            
Sbjct: 979  GYAQHGFVHEALBLVQKMQQ--AGVKPNVVSW---------------------------- 1008

Query: 496  AADVIVGNALITMYAKCGSIDGAFQIFKGIS----DRDIVSWNAMLSAYALHGLGKGALL 551
                   N LI  +++ G      ++F+ ++    + D+VSW +++S +  +        
Sbjct: 1009 -------NTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFD 1061

Query: 552  LFEEMKREGFAPDDISILGVLQACI-YSGLSEG----GICLFNEIEQIYGLRPILEHFAC 606
             F+EM  +GF P  ++I  +L AC   + L  G    G  +   +E+   +R      + 
Sbjct: 1062 AFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVR------SA 1115

Query: 607  MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            +VD+  + G +SEA  L    P   + + W +L+
Sbjct: 1116 LVDMYAKCGYISEAKILFYMMP-ERNTVTWNSLI 1148



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%)

Query: 72   GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
             +L+ G+ +H + +  G + D +  + L+++YAK   +  A+ LF  M  R+ +TW SLI
Sbjct: 1089 ANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLI 1148

Query: 132  KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
             GY + G     + +   M  S+ K +  T + +L ACS
Sbjct: 1149 FGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS 1187


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 217/696 (31%), Positives = 359/696 (51%), Gaps = 26/696 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV--AQKLFDGMLVRSAITWTSLI 131
           L    AVH  + ++      F  N L+  Y +    D   A++L D M  R+A+++  LI
Sbjct: 26  LPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLI 85

Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
             Y   G  E  L      +R+ E K +  T +  L ACS       G+ +HA A+  G 
Sbjct: 86  DAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGL 145

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
              VFV  SL+SMY   G   EA  VF     +D    N ++  Y + G  E    VF  
Sbjct: 146 AEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFAL 205

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEG--KQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +       N +   +VI  C    G   G  + +HG  VK G+  ++ + +A+V MY K 
Sbjct: 206 MRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKR 265

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHG------GKAINGFLEFLDLGICCDSS 362
           G   EA  +F ++ + N++ + A+I+G  R           +A++ + E    G+     
Sbjct: 266 GALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEF 325

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
             ++VI  C++  ++E G Q+HG  +KH +  D  +G+AL+D+Y     ++      DGF
Sbjct: 326 TFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACME------DGF 379

Query: 423 SC------KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            C      +    + A++SG ++   +  E  + LF +    G++PDP T S +++  AS
Sbjct: 380 RCFRSVPKQDVVTWTAMISGCVQN--ELFERALALFHELLGVGLKPDPFTISSVMNACAS 437

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
            A +  G  +  ++ K+G+     +GN+ I MYA+ G+++ A Q F+ +   D+VSW+A+
Sbjct: 438 LAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAI 497

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S++A HG  + AL  F EM      P++I+ LGVL AC + GL + G+  +  ++  YG
Sbjct: 498 ISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYG 557

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           L P ++H  C+VDLLGRAGRL++A   I  S F + P++W++L+   ++  + +   L +
Sbjct: 558 LCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVA 617

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
            R+++L+P  +G ++ + NMY   G L   +K+R  M +  + KE G SWIE+ S +H F
Sbjct: 618 DRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSF 677

Query: 717 VASGKDHPESEEIYSKL-DLLNDEMKLKVKDSSAFE 751
           VA  K HPE   IY+KL ++L+   KL   D+S  E
Sbjct: 678 VAGDKSHPECNAIYTKLAEMLSKIDKLTTTDTSCIE 713



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 237/483 (49%), Gaps = 12/483 (2%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G LK G+ VHA  +  G     F +N+L+++YA+   +  A+++FD    R  ++W SL
Sbjct: 127 AGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSL 186

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG--EQIHAFAIKS 188
           + GYL  G +E +L +   M R     N      +++ CS  +  + G  E +H   +K+
Sbjct: 187 VSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKA 246

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK---AGESEM-- 243
           G + ++F+ ++++ MY   G   EA  +F+ +   +V   N MI    +   A   E+  
Sbjct: 247 GLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVR 306

Query: 244 -AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  ++  L S   EP ++TF++VI  C     +E GKQ+HG  +K     +  +G+A++
Sbjct: 307 EALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALI 366

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +Y      E+  R F ++ ++++++WTA+ISG V++    +A+  F E L +G+  D  
Sbjct: 367 DLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPF 426

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +++V++ C+  + +  G Q+  FA K G+     +G + + +YA+ G++++A       
Sbjct: 427 TISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEM 486

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                  ++AI+S   +     +   +  F++   A + P+ +TF  +L+  +    +  
Sbjct: 487 ESHDVVSWSAIISSHAQHGCARQ--ALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDE 544

Query: 483 G-RSLHAYSIKTGYAADVIVGNALITMYAKCGSI-DGAFQIFKGISDRDIVSWNAMLSAY 540
           G R      ++ G    V     ++ +  + G + D    I   I   + V W ++L + 
Sbjct: 545 GLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSC 604

Query: 541 ALH 543
            +H
Sbjct: 605 RIH 607


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 228/732 (31%), Positives = 362/732 (49%), Gaps = 60/732 (8%)

Query: 81  HAFLLKSGS--QNDTFE-ANNLINLYAKFNRLDVAQKLFDGMLVR--SAITWTSLIKGYL 135
           HA LL   S  Q   F  A NLI  Y   N    A  L + +     S   W  LI+  L
Sbjct: 176 HAKLLHQQSIMQGLLFHLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRAL 235

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
             G    V  +   M       + +T   + +AC+ L     G  +HA   +SGF +NVF
Sbjct: 236 HLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVF 295

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYK---DVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           V  +++SMY   G  R A N+F  L ++   D+   N ++  Y  A ++  A  +F  + 
Sbjct: 296 VCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMT 355

Query: 253 SSDF-EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           +     P+  +  N++  C        G+Q+HG +++ G+V ++ VGNA+V MY K G  
Sbjct: 356 TRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKM 415

Query: 312 EEAERMF------DAIS-----------------------------ERNLISWTALISGY 336
           EEA ++F      D +S                             E ++++WTA+I+GY
Sbjct: 416 EEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGY 475

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK------- 389
            + G G +A++ F +  D G   +   L +++  C     L  G + H +AIK       
Sbjct: 476 AQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDG 535

Query: 390 -HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY--TAEFNAILSGFMEKIADDEE 446
                 D+++   L+D+YAK    + AR + D  S K      +  ++ G+ +    D  
Sbjct: 536 PDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQH--GDAN 593

Query: 447 DVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI-VGN 503
           + + LFS   +    ++P+  T S  L   A  A L  GR +HAY ++  Y + ++ V N
Sbjct: 594 NALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVAN 653

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
            LI MY+K G +D A  +F  +  R+ VSW ++++ Y +HG G+ AL +F+EM++    P
Sbjct: 654 CLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVP 713

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           D I+ L VL AC +SG+ + GI  FN + + +G+ P  EH+ACMVDL GRAGRL EAM L
Sbjct: 714 DGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKL 773

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
           IN  P   +P++W  L+S  +L +N +    A+ RLL+LE  + GS+ L+SN+YA     
Sbjct: 774 INEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRW 833

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLLNDEMKL 742
            + A++R TM    + K  GCSWI+    +  F    + HP+S++IY  L DL+     +
Sbjct: 834 KDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAI 893

Query: 743 KVKDSSAFELQD 754
                ++F L D
Sbjct: 894 GYVPQTSFALHD 905



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 177/422 (41%), Gaps = 54/422 (12%)

Query: 52  SERTLLFNDWPQLVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           + R L+  D   LV I      L     G+ VH F ++SG  +D F  N ++++YAK  +
Sbjct: 355 TTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGK 414

Query: 109 LDVAQKLFDGMLVRSAI-----------------------------------TWTSLIKG 133
           ++ A K+F  M  +  +                                   TWT++I G
Sbjct: 415 MEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITG 474

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK------ 187
           Y   G     L +   M     + N  T   +L AC  +   + G++ H +AIK      
Sbjct: 475 YAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLD 534

Query: 188 --SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF--MILEYNKAGESEM 243
                 +++ V   LI MY        A  +F  ++ KD   V +  MI  Y + G++  
Sbjct: 535 GPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANN 594

Query: 244 AFHVFVHLLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGN 299
           A  +F  +   D   +PND+T +  +  C     +  G+Q+H   ++  +G V  + V N
Sbjct: 595 ALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVM-LFVAN 653

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            ++ MY K G  + A+ +FD + +RN +SWT+L++GY   G G  A+  F E   + +  
Sbjct: 654 CLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVP 713

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKH-GYLSDVRLGTALVDIYAKGGDLKSARML 418
           D      V+  CS    ++ G+       K  G          +VD++ + G L  A  L
Sbjct: 714 DGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKL 773

Query: 419 LD 420
           ++
Sbjct: 774 IN 775



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 15/287 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLK--------SGSQNDTFEANNLINLYAKFNRLDVAQKL 115
           L+   +  G L  G+  H + +K            +D    N LI++YAK    +VA+K+
Sbjct: 506 LLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKM 565

Query: 116 FDGMLV--RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE--KFNEHTCSVILEACSL 171
           FD +    R  +TWT +I GY   GD  + L +   M++ ++  K N+ T S  L AC+ 
Sbjct: 566 FDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACAR 625

Query: 172 LEDRIFGEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
           L    FG Q+HA+ +++ + +  +FV   LI MY  SG    A+ VF  +  ++      
Sbjct: 626 LAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTS 685

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKF 289
           ++  Y   G  E A  VF  +      P+  TF  V+  C  +  V+ G    + ++  F
Sbjct: 686 LMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDF 745

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
           GV         +V ++G+ G   EA ++ + +  E   + W AL+S 
Sbjct: 746 GVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 205/676 (30%), Positives = 361/676 (53%), Gaps = 3/676 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  D ++G  V+  +L  G ++D F  N L+++Y++   L  A+++FD M 
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP 168

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           VR  ++W SLI GY   G YE  L I  ++  S    +  T S +L A   L     G+ 
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H FA+KSG  + V V   L++MY       +A  VF  +  +D    N MI  Y K   
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E +  +F+  L   F+P+  T ++V+  C     +   K ++   +K G V E +V N 
Sbjct: 289 VEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI 347

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G    A  +F+++  ++ +SW ++ISGY++SG   +A+  F   + +    D
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
                 +I   +  ++L+ G  LH   IK G   D+ +  AL+D+YAK G++  +  +  
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                 T  +N ++S  + +  D    + V  +Q R + + PD  TF   L + AS A  
Sbjct: 468 SMGTGDTVTWNTVISACV-RFGDFATGLQVT-TQMRKSEVVPDMATFLVTLPMCASLAAK 525

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H   ++ GY +++ +GNALI MY+KCG ++ + ++F+ +S RD+V+W  M+ AY
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 585

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
            ++G G+ AL  F +M++ G  PD +  + ++ AC +SGL + G+  F +++  Y + P+
Sbjct: 586 GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPM 645

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           +EH+AC+VDLL R+ ++S+A   I + P      +W +++   +   + + +   S+R++
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 705

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L P D G  IL SN YA     D+ + +R ++ D  ++K  G SWIE+   +H F +  
Sbjct: 706 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGD 765

Query: 721 KDHPESEEIYSKLDLL 736
              P+SE IY  L++L
Sbjct: 766 DSAPQSEAIYKSLEIL 781



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 266/515 (51%), Gaps = 4/515 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-L 120
           P + +    S +L   + +HA ++  G  +  F +  LI+ Y+ F     +  +F  +  
Sbjct: 8   PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            ++   W S+I+ +  +G +   L     +  S+   +++T   +++AC+ L D   G+ 
Sbjct: 68  AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           ++   +  GFE+++FVG +L+ MY   G    A  VF  +  +D+   N +I  Y+  G 
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  ++  L +S   P+ +T ++V+      L V++G+ LHG A+K GV   + V N 
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V MY K     +A R+FD +  R+ +S+  +I GY++     +++  FLE LD     D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPD 306

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              +++V+  C    +L L   ++ + +K G++ +  +   L+D+YAK GD+ +AR + +
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
              CK T  +N+I+SG+++  + D  + M LF    +   + D +T+  L+S+S   A L
Sbjct: 367 SMECKDTVSWNSIISGYIQ--SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ LH+  IK+G   D+ V NALI MYAKCG +  + +IF  +   D V+WN ++SA 
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
              G     L +  +M++    PD  + L  L  C
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 10/177 (5%)

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           SR LS S++   L   R +HA  I  G  +       LI  Y+       +  +F+ +S 
Sbjct: 11  SRALSSSSN---LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67

Query: 528 -RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL--SEGG 584
            +++  WN+++ A++ +GL   AL  + +++    +PD  +   V++AC  +GL  +E G
Sbjct: 68  AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMG 125

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             ++ +I  + G    L     +VD+  R G L+ A  + +  P  +  + W +L+S
Sbjct: 126 DLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL-VSWNSLIS 180


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 207/662 (31%), Positives = 342/662 (51%), Gaps = 5/662 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K+   S D+  G  VH  + K G   D +  N L+ LY     L+ A++LFD M 
Sbjct: 162 FPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP 221

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            R  ++W ++I     +GDY         M  RS  K N  +   +L   + LED     
Sbjct: 222 ERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTR 281

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IH +++K G ++ V    +L+  Y   G  +    VF     K+    N +I      G
Sbjct: 282 RIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKG 341

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
               A + F  ++ +  +PN  T ++++ V  E    + GK++HG +++ G   +I + N
Sbjct: 342 RCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIAN 401

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +++ MY K G S EA  +F  +  RN++SW A+I+ Y  +    +AI   ++  + G C 
Sbjct: 402 SLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECP 461

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           ++     V+  C+    L  G ++H   ++ G  SD+ +  +L+D+YAK G L SAR + 
Sbjct: 462 NAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF 521

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +  S K    +N ++ G+ E   DD    + LFS+ RL G +PD V+F  ++S  A+ A 
Sbjct: 522 NT-SRKDEVSYNILIIGYSE--TDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAA 578

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L +G+ +H  +++    + + V N+L+  Y KCG ID A ++F  I  +D+ SWN M+  
Sbjct: 579 LKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILG 638

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y + G  + A+ +FE M+ +    D +S + VL AC + GL E G   F+E+     L P
Sbjct: 639 YGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLA-QRLEP 697

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
              H+ CMVDLLGRAG + EA  LI   P +    +W  L+   ++  N +    A++ L
Sbjct: 698 TEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHL 757

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
            +L+P+  G +IL+SN+YA  G  DEA K+R  M      K  GCSW++I  ++H FVA 
Sbjct: 758 FELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAE 817

Query: 720 GK 721
            +
Sbjct: 818 ER 819



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 267/552 (48%), Gaps = 19/552 (3%)

Query: 98  NLINLYAKFNRLDVAQKLFDGML--VRSAITWTSLIKGY--LDDGDYESVLGIACDMYRS 153
           +LI  YAKF        LF+      R+A  W +LI+ +    +G ++        M R 
Sbjct: 95  SLILNYAKFQHPGSFCSLFNQTFQNCRTAFLWNTLIRAHSIAWNGTFDG-FETYNRMVRR 153

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
             + ++HT   +L+ CS   D   G ++H    K GF+ +V+VG +L+ +Y + G   +A
Sbjct: 154 GVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDA 213

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGE-SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
             +F  +  +DV   N +I   +  G+ +E   + F  +L S  +PN  +  +++ +   
Sbjct: 214 RRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAA 273

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
               E  +++H  +VK G+  +++  NA+V  YGK G  +   ++F+   E+N +SW ++
Sbjct: 274 LEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSI 333

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           I+G    G    A+N F   +D G   +S  +++++         + G ++HGF+++ G 
Sbjct: 334 INGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGT 393

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
            +D+ +  +L+D+YAK G    A  +      +    +NA+++ +       E    V+ 
Sbjct: 394 ETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVI- 452

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            Q +  G  P+ VTF+ +L   A    L  G+ +HA  ++ G  +D+ V N+LI MYAKC
Sbjct: 453 -QMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKC 511

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G +  A  +F   S +D VS+N ++  Y+       +L LF EM+  G  PD +S +GV+
Sbjct: 512 GCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVI 570

Query: 573 QACI-YSGLSEGGICLFNEIEQIYGLRPILEHF---ACMVDLLGRAGRLSEAMNLINSSP 628
            AC   + L +G      E+  +     +  H      ++D   + GR+  A  L N   
Sbjct: 571 SACANLAALKQG-----KEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQIL 625

Query: 629 FSESPLLWRTLV 640
           F +    W T++
Sbjct: 626 FKDVA-SWNTMI 636



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 230/477 (48%), Gaps = 26/477 (5%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGTSLISMYF---HSGCFREAENVFRGL 220
           +L  CS ++  +  +Q+HA  I +GF   +V +  SLI  Y    H G F    N     
Sbjct: 60  LLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQ---- 115

Query: 221 AYKDVRCV---NFMILEYNKAGESEM-AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
            +++ R     N +I  ++ A       F  +  ++    + +D+TF  V+ +C ++  +
Sbjct: 116 TFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDI 175

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
            +G ++HG+  K G   ++ VGN ++ +YG  G   +A R+FD + ER+++SW  +I   
Sbjct: 176 CKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLL 235

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL---ELGLQLHGFAIKHGYL 393
             +G   +A N +   +   +   +  L +VI    + + L   E+  ++H +++K G  
Sbjct: 236 SVNGDYTEARNYYFWMILRSVIKPN--LVSVISLLPISAALEDEEMTRRIHCYSVKVGLD 293

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           S V    ALVD Y K G +K+   + +    K    +N+I++G   K      D +  F 
Sbjct: 294 SQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACK--GRCWDALNAFR 351

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
               AG +P+ VT S +L +     C   G+ +H +S++ G   D+ + N+LI MYAK G
Sbjct: 352 MMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSG 411

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
               A  IF  +  R+IVSWNAM++ YAL+ L   A+    +M+  G  P+ ++   VL 
Sbjct: 412 HSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLP 471

Query: 574 ACIYSGLSEGGICLFNEIEQI---YGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
           AC   G    G     EI  +    GL   L     ++D+  + G L  A N+ N+S
Sbjct: 472 ACARLGFLGPG----KEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTS 524



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 150/322 (46%), Gaps = 9/322 (2%)

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMYGKHGMSEEAERMFD 319
           Y   N++++C +   + + KQ+H L +  G + R +S+  +++  Y K         +F+
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 320 AISE--RNLISWTALISGYVRSGHGGKAINGFLEF---LDLGICCDSSCLATVIDGCSVC 374
              +  R    W  LI  +  + +G    +GF  +   +  G+  D      V+  CS  
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNG--TFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDS 172

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
            ++  G+++HG   K G+ +DV +G  L+ +Y   G L  AR L D    +    +N I+
Sbjct: 173 FDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTII 232

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
            G +    D  E     F     + ++P+ V+   LL +SA+       R +H YS+K G
Sbjct: 233 -GLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVG 291

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             + V   NAL+  Y KCGS+   +Q+F    +++ VSWN++++  A  G    AL  F 
Sbjct: 292 LDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFR 351

Query: 555 EMKREGFAPDDISILGVLQACI 576
            M   G  P+ ++I  +L   +
Sbjct: 352 MMIDAGAQPNSVTISSILPVLV 373


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 199/643 (30%), Positives = 347/643 (53%), Gaps = 3/643 (0%)

Query: 95  EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY-RS 153
           E N+ +    K  ++  A+ +F+ M  R  I+WT+LI GY++  +    L +  +M+  S
Sbjct: 86  ELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDS 145

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
             + ++   SV L+AC+L  +  FGE +H F++KSG  N+VFV ++L+ MY   G   + 
Sbjct: 146 GLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQG 205

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
            +VF  +  ++V     +I+    AG S      F  +  S    + +TF   +    E+
Sbjct: 206 CSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAES 265

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             +  GK +H   +K G      V N + TMY K    +   R+F  +S  +++SWT LI
Sbjct: 266 GLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLI 325

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
             YV+ G   +A++ F       +  +    A+VI  C+  +  + G Q+HG A++ G +
Sbjct: 326 MTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLV 385

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
             + +  +++ +Y+K G L+ A ++ DG + K    ++ I+S + +      ++     S
Sbjct: 386 DALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQ--GSHAKEAFNYLS 443

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
                G +P+    + +LS+  S A L  G+ +HAY++  G   + +V +ALI+MY++ G
Sbjct: 444 WMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSG 503

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           ++  A +IF  I + DIVSW AM++ YA HG  + A+ LFE +   G  PD ++ +G+L 
Sbjct: 504 NLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILT 563

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC ++GL + G   +  +   Y + P  EH+ C++DLL RAGRLSEA +++ + PF    
Sbjct: 564 ACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDD 623

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           ++W TL+   +   +   +I A++++L L P  AG+ I ++N+Y+  G  +EAA VR  M
Sbjct: 624 VVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLM 683

Query: 694 NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
               + KE G SWI  + +L+ FVA  + HP S++I + L+LL
Sbjct: 684 KSKGVIKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELL 726



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 255/494 (51%), Gaps = 16/494 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           ++  G+ +H F +KSG  N  F ++ L+++Y K  + +    +F+ M  R+ ++WT++I 
Sbjct: 166 NVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIV 225

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G +  G     L    +M+RS+  ++ HT +V L+A +      +G+ IHA  IK GF  
Sbjct: 226 GLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNE 285

Query: 193 NVFVGTSLISMYFHSGCFREAENVFR---GLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             +V  +L +MY  S C R+ + V R    ++  DV     +I+ Y + G+ E A   F 
Sbjct: 286 TAYVVNTLGTMY--SKC-RKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFK 342

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
            +  SD  PN+YTF +VIS C  NL + + G+Q+HG A++ G+V  +SV N+I+T+Y K 
Sbjct: 343 RMRKSDVSPNEYTFASVISAC-ANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKC 401

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G+ +EA  +FD ++ +++ISW+ +IS Y +  H  +A N        G   +   LA+V+
Sbjct: 402 GLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVL 461

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C   + LE G Q+H +A+  G   +  + +AL+ +Y++ G+L+ A  + D        
Sbjct: 462 SVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIV 521

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            + A+++G+ E      ++ + LF      G+ PD VTF  +L+ + + A LV     + 
Sbjct: 522 SWTAMINGYAEH--GYSQEAISLFENISSVGLMPDYVTFIGILT-ACNHAGLV-DLGFYY 577

Query: 489 YSIKTG---YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           Y + T     A        +I +  + G +  A  + + +    D V W+ +L A   HG
Sbjct: 578 YKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHG 637

Query: 545 LGKGALLLFEEMKR 558
               A+   E+M R
Sbjct: 638 DLDRAIWAAEQMLR 651



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 210/429 (48%), Gaps = 12/429 (2%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K S  SG L  G+A+HA  +K G     +  N L  +Y+K  + D   +LF  M     
Sbjct: 259 LKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDV 318

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WT+LI  Y+  GD E  L     M +S+   NE+T + ++ AC+ L    +GEQIH  
Sbjct: 319 VSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGH 378

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           A++ G  + + V  S+I++Y   G  +EA  VF G+  KD+   + +I  Y +   ++ A
Sbjct: 379 ALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEA 438

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F+    +     +PN++   +V+SVC     +E GKQ+H  A+  G+  E  V +A+++M
Sbjct: 439 FNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISM 498

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y + G  +EA ++FD+I   +++SWTA+I+GY   G+  +AI+ F     +G+  D    
Sbjct: 499 YSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTF 558

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYAKGGDLKSARMLLDG-- 421
             ++  C+    ++LG   +        ++  +     ++D+  + G L  A  ++    
Sbjct: 559 IGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMP 618

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP----VTFSRLLSLSASQ 477
           F C      + + S  +    D  +    +++ +++  + P+     +T + + S S  +
Sbjct: 619 FPCD-----DVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRR 673

Query: 478 ACLVRGRSL 486
                 R L
Sbjct: 674 EEAAHVRKL 682


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 210/695 (30%), Positives = 365/695 (52%), Gaps = 9/695 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VR 122
           ++K     GD + G  VH   +KSG    T  AN L+ +YAK   LD A ++F+ M   R
Sbjct: 169 VLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGR 228

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
              +W S I G + +G +   L +   M       N +T   +L+ C+ L     G ++H
Sbjct: 229 DVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELH 288

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A  +K G E N+    +L+ MY   G    A  VFR +  KD    N M+  Y +     
Sbjct: 289 AALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYA 347

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A   F  ++ + F P+     +++S       +  G+++H  AVK  +  ++ + N ++
Sbjct: 348 EAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLM 407

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K    E + R+FD +  ++ +SWT +I+ Y +S    +AI  F      GI  D  
Sbjct: 408 DMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPM 467

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            + ++++ CS   ++ L  Q+H +AI++G L D+ L   ++DIY + G++  A  + +  
Sbjct: 468 MMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALNIFEML 526

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    + ++++ F E     E   + LF +   AG++PD V    +L   A  + L +
Sbjct: 527 DKKDIVTWTSMVNCFAENGLLHE--AVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTK 584

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +H + I+  +  +  V ++L+ MY+ CGS++ A ++F     +D+V W AM++A  +
Sbjct: 585 GKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGM 644

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG GK A+ +F+ M   G +PD +S L +L AC +S L + G    + +   Y L+P  E
Sbjct: 645 HGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQE 704

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+AC+VDLLGR+G+  EA   I S P     ++W  L+   ++  N + +++A+ +LL+L
Sbjct: 705 HYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLEL 764

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EP + G+++LVSN++A  G  +   ++RT M +  L K+  CSWIEI + +H F A    
Sbjct: 765 EPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHS 824

Query: 723 HPESEEIYSKLDLLNDEMKLK---VKDSSAFELQD 754
           H +S+ I+ KL  + ++++ +   V+D+S F L D
Sbjct: 825 HRDSQAIHLKLAEITEKLRREGQYVEDTS-FVLHD 858



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/597 (26%), Positives = 293/597 (49%), Gaps = 22/597 (3%)

Query: 77  GQAVHAFLLKSGSQNDT---FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           G+ +HA  + +G+  D    F A  L+ +Y K  RL  A +LFDGM  R+  +W +LI  
Sbjct: 74  GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEH----TCSVILEACSLLEDRIFGEQIHAFAIKSG 189
            L  G     +G+   M  SE          T + +L+AC    D   G ++H  A+KSG
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG 193

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFHVF 248
            + +  V  +L+ MY   G    A  VF  +   +DV   N  I    + G    A  +F
Sbjct: 194 LDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLF 253

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             + S  F  N YT   V+ VC E   +  G++LH   +K G    I   NA++ MY + 
Sbjct: 254 RRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARC 312

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  + A R+F  I +++ ISW +++S YV++    +AI+ F E +  G   D +C+ +++
Sbjct: 313 GWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLL 372

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
                   L  G ++H +A+K    SD+++   L+D+Y K   ++ +  + D    K   
Sbjct: 373 SAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHV 432

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +  I++ + +  +    + +  F   +  G++ DP+    +L   +    +   + +H+
Sbjct: 433 SWTTIIACYAQ--SSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHS 490

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y+I+ G   D+I+ N +I +Y +CG +  A  IF+ +  +DIV+W +M++ +A +GL   
Sbjct: 491 YAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHE 549

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQ--IYGLRPILEH-F 604
           A+ LF +M   G  PD ++++G+L A    S L++G      EI    I G  P+     
Sbjct: 550 AVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKG-----KEIHGFLIRGKFPVEGAVV 604

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           + +VD+    G ++ A+ + + +   +  +LW  +++ + +  + K +I   KR+L+
Sbjct: 605 SSLVDMYSGCGSMNYALKVFDEAK-CKDVVLWTAMINATGMHGHGKQAIYIFKRMLE 660



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 166/333 (49%), Gaps = 18/333 (5%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG---NAIVTMYGKHGMSEEA 314
           P D+ +  V+ +      V EG+QLH  AV  G + +   G     ++ MYGK G   +A
Sbjct: 54  PTDH-YGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDA 112

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD----LGICCDSSCLATVIDG 370
            R+FD +  R + SW ALI   + SG  G+A+  +          G   D   LA+V+  
Sbjct: 113 HRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKA 172

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA----RMLLDGFSCKY 426
           C    +   G ++HG A+K G      +  ALV +YAK G L SA      + DG   + 
Sbjct: 173 CGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDG---RD 229

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
            A +N+ +SG ++     E   + LF + +  G   +  T   +L + A  A L  GR L
Sbjct: 230 VASWNSAISGCVQNGMFLE--ALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGREL 287

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HA  +K G   + I  NAL+ MYA+CG +D A ++F+ I D+D +SWN+MLS Y  + L 
Sbjct: 288 HAALLKCGTEFN-IQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLY 346

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
             A+  F EM + GF PD   I+ +L A  + G
Sbjct: 347 AEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLG 379



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 444 DEEDVMVLFSQQRLAGMEPDPVT-FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D  + +   + +   G  P P   +  +L L A +  +  GR LHA+++ TG   D   G
Sbjct: 34  DLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAG 93

Query: 503 ---NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
                L+ MY KCG +  A ++F G+  R + SWNA++ A    G    A+ ++  M+  
Sbjct: 94  FLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRAS 153

Query: 560 ----GFAPDDISILGVLQAC 575
               G APD  ++  VL+AC
Sbjct: 154 EPVAGAAPDGCTLASVLKAC 173


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 187/582 (32%), Positives = 313/582 (53%), Gaps = 7/582 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+HA  I +G+    F+   L++MY   G    A  +F  +  +++     MI   ++
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
             +   A   F  +      P  + F++ I  C     +E GKQ+H LA+KFG+  E+ V
Sbjct: 84  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G+ +  MY K G   +A ++F+ +  ++ +SWTA+I GY + G   +A+  F + +D  +
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   L + +  C      + G  +H   +K G+ SD+ +G AL D+Y+K GD++SA  
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263

Query: 418 LLDGFS-CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           +    S C+    +  ++ G++E   +  E  + +F + R  G+EP+  TFS L+   A+
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVE--TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
           QA L +G  LHA  +K  +  D  V + L+ MY KCG ++ A Q F  I D   ++WN++
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSL 381

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S +  HGLGK A+  FE M   G  P+ I+ + +L  C ++GL E G+  F  +++ YG
Sbjct: 382 VSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P  EH++C++DLLGRAGRL EA   IN  PF  +   W + +   ++  + +   LA+
Sbjct: 442 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAA 501

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           ++L+ LEPK++G+ +L+SN+YA +   ++   VR  M D  + K  G SW+++  K H F
Sbjct: 502 EKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVF 561

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK----LKVKDSSAFELQD 754
            A    H     IY KLD L D++K    +   DS   ++ D
Sbjct: 562 GAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDD 603



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 235/492 (47%), Gaps = 11/492 (2%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           N    +++    +  L+ G+ +HA L+ +G    TF  N+L+N+Y+K   LD A KLFD 
Sbjct: 6   NALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDT 65

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R+ ++WT++I G   +  +   +   C M    E   +   S  + AC+ L     G
Sbjct: 66  MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q+H  A+K G  + +FVG++L  MY   G   +A  VF  +  KD      MI  Y+K 
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           GE E A   F  ++  +   + +   + +  C      + G+ +H   VK G   +I VG
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 299 NAIVTMYGKHGMSEEAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           NA+  MY K G  E A  +F   SE RN++S+T LI GYV +    K ++ F+E    GI
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +    +++I  C+  + LE G QLH   +K  +  D  + + LVD+Y K G L+ A  
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQ 365

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
             D         +N+++S F +      +D +  F +    G++P+ +TF  LL+   S 
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLG--KDAIKFFERMVDRGVKPNAITFISLLT-GCSH 422

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVG----NALITMYAKCGSIDGAFQIFKGIS-DRDIVS 532
           A LV     + YS+   Y   V+ G    + +I +  + G +  A +    +  + +   
Sbjct: 423 AGLVEEGLDYFYSMDKTYG--VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG 480

Query: 533 WNAMLSAYALHG 544
           W + L A  +HG
Sbjct: 481 WCSFLGACRIHG 492



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 214/427 (50%), Gaps = 8/427 (1%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
             +VI    +   +  GKQLH L +  G      + N +V MY K G  + A ++FD + 
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           +RNL+SWTA+ISG  ++    +AI  F      G        ++ I  C+   ++E+G Q
Sbjct: 68  QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 127

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H  A+K G  S++ +G+ L D+Y+K G +  A  + +   CK    + A++ G+  KI 
Sbjct: 128 MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY-SKIG 186

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           + EE ++               V  S L +  A +AC   GRS+H+  +K G+ +D+ VG
Sbjct: 187 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF-GRSVHSSVVKLGFESDIFVG 245

Query: 503 NALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
           NAL  MY+K G ++ A  +F   S+ R++VS+  ++  Y      +  L +F E++R+G 
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQI-YGLRPILEHFACMVDLLGRAGRLSEA 620
            P++ +   +++AC      E G  L  ++ +I +   P +   + +VD+ G+ G L  A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEHA 363

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK-DAGSFILVSNMYAG 679
           +   +      + + W +LVSV       K +I   +R++D   K +A +FI +    + 
Sbjct: 364 IQAFDEIG-DPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSH 422

Query: 680 QGMLDEA 686
            G+++E 
Sbjct: 423 AGLVEEG 429



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 6/353 (1%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D++ LA VI   +    L  G QLH   I  GY     L   LV++Y+K G+L  A  L 
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    +    + A++SG  +     E   +  F   R+ G  P    FS  +   AS   
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSE--AIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           +  G+ +H  ++K G  +++ VG+ L  MY+KCG++  A ++F+ +  +D VSW AM+  
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y+  G  + ALL F++M  E    D   +   L AC      + G  + + + ++ G   
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL-GFES 240

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASK 657
            +     + D+  +AG +  A N+        + + +  L+   V         S+    
Sbjct: 241 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVEL 300

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
           R   +EP +  +F  +    A Q  L++  ++   +  +   ++   S I +D
Sbjct: 301 RRQGIEPNEF-TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVD 352


>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
 gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
          Length = 629

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 199/565 (35%), Positives = 320/565 (56%), Gaps = 10/565 (1%)

Query: 182 HAFAIK-SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           HA A K     +NV+V TSL++MY   G   +A  VF G+  ++    + M+  Y     
Sbjct: 34  HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93

Query: 241 SEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           SE AF +F  +L     E +++  T V+S     LG+  G+Q+HGL VK G++  +SV N
Sbjct: 94  SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 153

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           ++VTMY K G    A  +F++  ERN I+W+A+I+GY ++G    A++ F +    G   
Sbjct: 154 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 213

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                  V++  S    L +G Q HG  +K G+   + + +ALVD+YAK G +  A+   
Sbjct: 214 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAK--- 270

Query: 420 DGFSCKYTAE---FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           +GF   Y  +   + A++SG ++    + E+ + L+++    G+ P   T +  L   A 
Sbjct: 271 EGFDQLYEVDIVLWTAMVSGHVQN--GEHEEALTLYARMDKEGIIPSKSTIASGLRACAG 328

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
            A L  G+ LH   +K G      VG+AL TMY+KCG+++    +F+ I DRD+++WN++
Sbjct: 329 IAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSI 388

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S ++ +G G GAL LFEEMK EG  PD+I+ + +L AC + GL + G   F+ + + YG
Sbjct: 389 ISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYG 448

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           L P L+H+ACMVD+L RAG L EA + I S        LWR ++   + + +      A 
Sbjct: 449 LTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAG 508

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           +RL++L   D+ ++IL+SN+YA Q   ++  +VR  M    ++K+ GCSW+E++S++H F
Sbjct: 509 ERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVF 568

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
           V   + HPE+E I ++L  L   MK
Sbjct: 569 VVGEQQHPEAENINAQLRRLAKHMK 593



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 213/410 (51%), Gaps = 14/410 (3%)

Query: 81  HAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           HA   K  S  ++ +   +L+N+Y K   +  A+++FDGM  R++ +W++++ GY  +  
Sbjct: 34  HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93

Query: 140 YESVLGIACDMYR------SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            E     A D++R        EK +E   + +L A S+    + GEQ+H   +K G  + 
Sbjct: 94  SEE----AFDLFRLMLEECPSEK-SEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDF 148

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V V  SL++MY  +GC   A +VF     ++    + MI  Y + GE++ A  +F  + +
Sbjct: 149 VSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHA 208

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           + F P ++TF  V++   +   +  GKQ HGL VK G   +I V +A+V MY K G   +
Sbjct: 209 AGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIAD 268

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+  FD + E +++ WTA++SG+V++G   +A+  +      GI    S +A+ +  C+ 
Sbjct: 269 AKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAG 328

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + LE G QLH   +K+G      +G+AL  +Y+K G+L+    +      +    +N+I
Sbjct: 329 IAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSI 388

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
           +SGF +    +    + LF + ++ G  PD +TF  +L   +    + RG
Sbjct: 389 ISGFSQNGCGN--GALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRG 436



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 181/371 (48%), Gaps = 1/371 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L +G+ +H  ++K G  +     N+L+ +YAK   +  A  +F+    R++ITW+++I G
Sbjct: 130 LLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITG 189

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G+ +S + +   M+ +     E T   +L A S L     G+Q H   +K GFE  
Sbjct: 190 YAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQ 249

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           ++V ++L+ MY   GC  +A+  F  L   D+     M+  + + GE E A  ++  +  
Sbjct: 250 IYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDK 309

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+  T  + +  C     +E GKQLH   VK+G+     VG+A+ TMY K G  E+
Sbjct: 310 EGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLED 369

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
              +F  I +R++I+W ++ISG+ ++G G  A++ F E    G   D+     ++  CS 
Sbjct: 370 GMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSH 429

Query: 374 CSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              ++ G +      K +G    +     +VDI ++ G LK A+  ++  +  +      
Sbjct: 430 MGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWR 489

Query: 433 ILSGFMEKIAD 443
           I+ G    + D
Sbjct: 490 IVLGACRSLRD 500


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 202/686 (29%), Positives = 347/686 (50%), Gaps = 3/686 (0%)

Query: 56  LLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKL 115
           L  N +  ++++      L+ G+ VH+ ++ +G   D      L+ +Y     L   +K+
Sbjct: 92  LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKI 151

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FD ++      W  L+  Y   G++   + +   M +     N +T + +L+  + L   
Sbjct: 152 FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKV 211

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
              +++H + +K GF +N  V  SLI+ YF  G    A N+F  L+  DV   N MI   
Sbjct: 212 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 271

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
              G S     +F+ +L    E +  T  +V+  C     +  G+ LHG  VK     E+
Sbjct: 272 VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEV 331

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
              N ++ MY K G    A  +F  + +  ++SWT++I+ YVR G    AI  F E    
Sbjct: 332 VFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSK 391

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D   + +++  C+  S+L+ G  +H + IK+G  S++ +  AL+++YAK G ++ A
Sbjct: 392 GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 451

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R++      K    +N ++ G+ + +  +E   + L  Q++    +PD +T + +L   A
Sbjct: 452 RLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQF---KPDDITMACVLPACA 508

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
             A L +GR +H + ++ GY +D+ V  AL+ MYAKCG +  A  +F  I  +D++SW  
Sbjct: 509 GLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTV 568

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++ Y +HG G  A+  F EM+  G  PD+ S   +L AC +SGL   G   FN +    
Sbjct: 569 MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNEC 628

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           G+ P LEH+AC+VDLL R G LS+A   I S P      +W  L+S  ++  + K +   
Sbjct: 629 GVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKV 688

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           ++ + +LEP +   +++++N+YA     +E  K+R  M      +  GCSWIE+  K + 
Sbjct: 689 AEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNI 748

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMK 741
           FVA    HP++++I   L  L  +M+
Sbjct: 749 FVAGNSKHPQAKKIDVLLSKLTMQMQ 774



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 202/388 (52%), Gaps = 4/388 (1%)

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           S  +E    ++ +V+ +C E   +E+GK++H + +  G+  + ++G  +V MY   G   
Sbjct: 87  SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLV 146

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +  ++FD I    +  W  L+S Y + G+  ++++ F +   LG+  +      V+   +
Sbjct: 147 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 206

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               ++   ++HG+ +K G+ S+  +  +L+  Y K G ++SA  L D  S      +N+
Sbjct: 207 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 266

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++G +  +     + + +F Q  + G+E D  T   +L   A+   L  GR+LH + +K
Sbjct: 267 MINGCV--VNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVK 324

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
             ++ +V+  N L+ MY+KCG+++GA ++F  + D  IVSW ++++AY   GL   A+ L
Sbjct: 325 ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGL 384

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+EM+ +G  PD  ++  ++ AC  S   + G  + + + +  G+   L     ++++  
Sbjct: 385 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYA 443

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLV 640
           + G + EA  + +  P  +  + W T++
Sbjct: 444 KCGSVEEARLVFSKIPVKD-IVSWNTMI 470


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 204/676 (30%), Positives = 358/676 (52%), Gaps = 11/676 (1%)

Query: 74  LKLGQAVHAFLLKSGSQN-------DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           L  G+ VH  L+ S S +       +T   N+LI +Y +    D A+++FD M  R+ ++
Sbjct: 60  LPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVS 119

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W S+I  ++ +G     LG+   M RS    ++      + AC+ L D   G Q+HA A+
Sbjct: 120 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 179

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           KS   +++ V  +L++MY  +G   +   +F  +  KD+     +I  + + G    A  
Sbjct: 180 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 239

Query: 247 VFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           VF  ++      PN++ F +    C      E G+Q+HGL++K+ + R++ VG ++  MY
Sbjct: 240 VFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 299

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            +    + A   F  I   +L+SW ++++ Y   G   +A+  F E  D G+  D   + 
Sbjct: 300 ARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 359

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            ++  C     L  G  +H + +K G   DV +  +L+ +YA+  DL SA  +      +
Sbjct: 360 GLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 419

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N+IL+   +   +  E+V+ LFS    +    D ++ + +LS SA        + 
Sbjct: 420 DVVTWNSILTACAQH--NHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQ 477

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHG 544
           +HAY+ K G   D ++ N LI  YAKCGS+D A ++F+ + ++RD+ SW++++  YA  G
Sbjct: 478 VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 537

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
             K AL LF  M+  G  P+ ++ +GVL AC   G    G   ++ +E  YG+ P  EH 
Sbjct: 538 YAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC 597

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
           +C+VDLL RAG+L+EA N I+  PF    ++W+TL++ SK+  + +    A++ +L+++P
Sbjct: 598 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 657

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
             + +++L+ N+YA  G  +E A+++  M    + K  G SW+++  +L  F+   + HP
Sbjct: 658 SHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHP 717

Query: 725 ESEEIYSKLDLLNDEM 740
           ESEEIY+ L+L+  EM
Sbjct: 718 ESEEIYAMLELIGMEM 733


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 220/668 (32%), Positives = 356/668 (53%), Gaps = 9/668 (1%)

Query: 77  GQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           G+ +H   +K G  + +      L+++Y K   ++  + +F+GM  R+ +TWTSL+ GY+
Sbjct: 118 GEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYV 177

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
                  V+ +   M       N  T + +L A +       G ++HA ++K G  + VF
Sbjct: 178 QGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVF 237

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  SLI+MY   G   EA+ VFR +  +D+   N ++           A  +F    +S 
Sbjct: 238 VCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASM 297

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            + +  T++ VI +C     +   +QLH   +K G   + +V  AI+  Y K G  ++A 
Sbjct: 298 AKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAF 357

Query: 316 RMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            +F  +   +N++SWTA+I G +++     A   F    +  +  +    +TV+      
Sbjct: 358 NIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA---- 413

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           S   L  Q+H   IK  Y     +GTAL+  Y+K G+ + A  +      K    ++A+L
Sbjct: 414 SIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAML 473

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS-QACLVRGRSLHAYSIKT 493
           S + +  A D +    +F +  + GM+P+  T S  +   AS  A + +GR  HA SIK 
Sbjct: 474 SCYSQ--AGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKY 531

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
            Y   + VG+AL+TMYA+ GSID A  +F+  +DRD+VSWN+M+S YA HG  K AL  F
Sbjct: 532 RYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTF 591

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            +M+  G   D  + L V+  C ++GL + G   F+ +   + + P +EH++CMVDL  R
Sbjct: 592 RQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSR 651

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AG+L E MNLI   PF    ++WRTL+   ++  N +   LA+++LL LEP D+ +++L+
Sbjct: 652 AGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLL 711

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+YA  G   E  +VR  M+  ++ KEAGCSWI+I +K+H F+A  K HP SE+IY+KL
Sbjct: 712 SNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKL 771

Query: 734 DLLNDEMK 741
             +   +K
Sbjct: 772 KAMTTRLK 779



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 266/545 (48%), Gaps = 31/545 (5%)

Query: 112 AQKLFDGMLVRSAITWTSLIK-GYLDDGDYESVLGIACDMYRSEEKFNEHTC-------- 162
           A++  DGM  R A   +S      +D G      G A D +      + H C        
Sbjct: 48  ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHF-----VDVHRCGRVQGAAV 102

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLA 221
           S +L+ C L+ DR+ GEQ+H   +K GF+   V VGT+L+ MY   G   +   VF G+ 
Sbjct: 103 SRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMP 162

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            ++V     ++  Y +         +F  + +    PN +TFT+V+S       V+ G++
Sbjct: 163 KRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRR 222

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +H  +VKFG    + V N+++ MY K G+ EEA+ +F  +  R+++SW  L++G + + H
Sbjct: 223 VHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEH 282

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             +A+  F +          S  +TVI  C+    L L  QLH   +KHG+ SD  + TA
Sbjct: 283 QLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTA 342

Query: 402 LVDIYAKGGDLKSA---RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           ++D Y+K G+L  A    +L+ G   +    + A++ G ++    D      LFS+ R  
Sbjct: 343 IMDAYSKCGELDDAFNIFLLMPG--SQNVVSWTAMIGGCIQNA--DIPLAAALFSRMRED 398

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
            ++P+  T+S +L+ S      +    +HA  IKT Y     VG AL+  Y+K G+ + A
Sbjct: 399 NVKPNEFTYSTVLTASIP----ILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEA 454

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-- 576
             IFK I  +D+V+W+AMLS Y+  G   GA  +F +M  +G  P++ +I   + AC   
Sbjct: 455 LSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASP 514

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
            +G+ +G    F+ I   Y  +  +   + +V +  R G +  A  ++         + W
Sbjct: 515 TAGIDQGR--QFHAISIKYRYQDAICVGSALVTMYARKGSIDSA-RIVFERQTDRDLVSW 571

Query: 637 RTLVS 641
            +++S
Sbjct: 572 NSMIS 576



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 256/534 (47%), Gaps = 29/534 (5%)

Query: 32  FSPNPKSQVAYLCS-----ISSVSCSERTLLF------NDWPQ------LVKISIGSGDL 74
           F   PK  V    S     +   +CS+   LF        WP       ++      G +
Sbjct: 158 FEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAV 217

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
            LG+ VHA  +K G ++  F  N+LIN+Y+K   ++ A+ +F  M  R  ++W +L+ G 
Sbjct: 218 DLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGL 277

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           L +      L +  D   S  K ++ T S +++ C+ L+      Q+H+  +K GF ++ 
Sbjct: 278 LLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDG 337

Query: 195 FVGTSLISMYFHSGCFREAENVFRGL-AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            V T+++  Y   G   +A N+F  +   ++V     MI    +  +  +A  +F  +  
Sbjct: 338 NVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMRE 397

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            + +PN++T++ V++     L      Q+H   +K       SVG A++  Y K G +EE
Sbjct: 398 DNVKPNEFTYSTVLTASIPIL----LPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEE 453

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC-S 372
           A  +F  I  +++++W+A++S Y ++G    A N F++    G+  +   +++ ID C S
Sbjct: 454 ALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACAS 513

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             + ++ G Q H  +IK+ Y   + +G+ALV +YA+ G + SAR++ +  + +    +N+
Sbjct: 514 PTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNS 573

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++SG+ +     E   +  F Q    G+E D  TF  ++ +  + A LV+    +  S+ 
Sbjct: 574 MISGYAQHGYSKE--ALDTFRQMETVGIEMDGATFLAVI-VGCTHAGLVKEGQQYFDSMV 630

Query: 493 TGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
             +     + +   ++ +Y++ G +D    + +G+      + W  +L A  +H
Sbjct: 631 MDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVH 684


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 197/618 (31%), Positives = 323/618 (52%), Gaps = 3/618 (0%)

Query: 125  ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
            I W   +  +L  G+    +    DM  S    +  T  V+L   + L     G+QIH  
Sbjct: 872  IAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGI 931

Query: 185  AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
             ++SG +  V VG  LI+MY  +G    A  VF  +   D+   N MI     +G  E +
Sbjct: 932  VVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECS 991

Query: 245  FHVFVHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +FV LL     P+ +T  +V+  C     G     Q+H  A+K GVV +  V   ++ 
Sbjct: 992  VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLID 1051

Query: 304  MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            +Y K G  EEAE +F      +L SW A++ GY+ SG   KA+  ++   + G   +   
Sbjct: 1052 VYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQIT 1111

Query: 364  LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            LA           L+ G Q+    +K G+  D+ + + ++D+Y K G+++SAR + +   
Sbjct: 1112 LANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP 1171

Query: 424  CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
                  +  ++SG +E     EE  +  +   RL+ ++PD  TF+ L+   +    L +G
Sbjct: 1172 SPDDVAWTTMISGCVEN--GQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229

Query: 484  RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
            R +HA ++K   A D  V  +L+ MYAKCG+I+ A  +FK  +   I SWNAM+   A H
Sbjct: 1230 RQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQH 1289

Query: 544  GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
            G  + AL  FEEMK  G  PD ++ +GVL AC +SGL       F  +++IYG+ P +EH
Sbjct: 1290 GNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEH 1349

Query: 604  FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
            ++C+VD L RAGR+ EA  +I+S PF  S  ++RTL++  ++  + +     +++LL LE
Sbjct: 1350 YSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALE 1409

Query: 664  PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
            P D+ +++L+SN+YA     +  A  R  M    + K+ G SW+++ +K+H FVA  + H
Sbjct: 1410 PSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSH 1469

Query: 724  PESEEIYSKLDLLNDEMK 741
             E++ IY+K++ +   ++
Sbjct: 1470 EETDVIYNKVEYIMKRIR 1487



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 158/595 (26%), Positives = 292/595 (49%), Gaps = 50/595 (8%)

Query: 47   SSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF 106
            S VS +  TL       + K+ + S      +++H + +K G Q D F A  L+N+YAKF
Sbjct: 721  SFVSATRHTL-----APVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKF 775

Query: 107  NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG-DYESVLGIACDMYRSEEKFNEHT-CS- 163
             R+  A+ LFDGM +R  + W  ++K Y+D G +YE++L +  +  R+  + ++ T C+ 
Sbjct: 776  GRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALL-LFSEFNRTGLRPDDVTLCTL 834

Query: 164  --VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
              V+    ++LE ++  +Q+ A+  K    ++   G+ +I+                   
Sbjct: 835  ARVVKSKQNVLEWQL--KQLKAYGTKLFMYDDDDDGSDVIAW------------------ 874

Query: 222  YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
                   N  +  + + GE+  A   FV +++S    +  TF  ++SV      +E GKQ
Sbjct: 875  -------NKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQ 927

Query: 282  LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
            +HG+ V+ G+ + +SVGN ++ MY K G    A  +F  ++E +L+SW  +ISG   SG 
Sbjct: 928  IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGL 987

Query: 342  GGKAINGFLEFLDLGICCDSSCLATVIDGC-SVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
               ++  F++ L  G+  D   +A+V+  C S+     L  Q+H  A+K G + D  + T
Sbjct: 988  EECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVST 1047

Query: 401  ALVDIYAKGGDLKSARMLL---DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
             L+D+Y+K G ++ A  L    DGF     A +NA++ G++  ++ D    + L+   + 
Sbjct: 1048 TLIDVYSKSGKMEEAEFLFVNQDGFDL---ASWNAMMHGYI--VSGDFPKALRLYILMQE 1102

Query: 458  AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
            +G   + +T +     +     L +G+ + A  +K G+  D+ V + ++ MY KCG ++ 
Sbjct: 1103 SGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMES 1162

Query: 518  AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-I 576
            A +IF  I   D V+W  M+S    +G  + AL  +  M+     PD+ +   +++AC +
Sbjct: 1163 ARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSL 1222

Query: 577  YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
             + L +G     N ++      P +     +VD+  + G + +A  L   +  S 
Sbjct: 1223 LTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTSR 1275



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 264/596 (44%), Gaps = 56/596 (9%)

Query: 61   WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM- 119
            W  +++ +I + DL LG+  HA +L SG   D F  NNLI +Y+K   L  A+KLFD   
Sbjct: 629  WFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688

Query: 120  -LVRSAITWTSLIKGYLD---DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
               R  +TW +++  + D   DG +   L     + RS      HT + + + C L    
Sbjct: 689  DTSRDLVTWNAILSAHADKARDGFHLFRL-----LRRSFVSATRHTLAPVFKMCLLSASP 743

Query: 176  IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
               E +H +A+K G + +VFV  +L+++Y   G  REA  +F G+  +DV   N M+  Y
Sbjct: 744  SAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAY 803

Query: 236  NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG--KQLHGLAVKFGVVR 293
               G    A  +F     +   P+D T   +  V      V E   KQL     K  +  
Sbjct: 804  VDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYD 863

Query: 294  EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
            +   G+                         ++I+W   +S +++ G   +A++ F++ +
Sbjct: 864  DDDDGS-------------------------DVIAWNKTLSWFLQRGETWEAVDCFVDMI 898

Query: 354  DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
            +  + CD      ++   +  + LELG Q+HG  ++ G    V +G  L+++Y K G + 
Sbjct: 899  NSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVS 958

Query: 414  SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
             AR +    +      +N ++SG    ++  EE  + +F      G+ PD  T + +L  
Sbjct: 959  RARTVFWQMNEVDLVSWNTMISGC--ALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRA 1016

Query: 474  SAS--QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
             +S    C +    +HA ++K G   D  V   LI +Y+K G ++ A  +F      D+ 
Sbjct: 1017 CSSLGGGCHL-ATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLA 1075

Query: 532  SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
            SWNAM+  Y + G    AL L+  M+  G   + I++    +A        GG+    + 
Sbjct: 1076 SWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAA-------GGLVGLKQG 1128

Query: 592  EQIY------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            +QI       G    L   + ++D+  + G +  A  + N  P S   + W T++S
Sbjct: 1129 KQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP-SPDDVAWTTMIS 1183



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 181/406 (44%), Gaps = 5/406 (1%)

Query: 68   SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
            S+G G   L   +HA  +K+G   D+F +  LI++Y+K  +++ A+ LF         +W
Sbjct: 1019 SLGGG-CHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASW 1077

Query: 128  TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
             +++ GY+  GD+   L +   M  S E+ N+ T +   +A   L     G+QI A  +K
Sbjct: 1078 NAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVK 1137

Query: 188  SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
             GF  ++FV + ++ MY   G    A  +F  +   D      MI    + G+ E A   
Sbjct: 1138 RGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFT 1197

Query: 248  FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
            + H+  S  +P++YTF  ++  C     +E+G+Q+H   VK     +  V  ++V MY K
Sbjct: 1198 YHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAK 1257

Query: 308  HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
             G  E+A  +F   +   + SW A+I G  + G+  +A+  F E    G+  D      V
Sbjct: 1258 CGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGV 1317

Query: 368  IDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
            +  CS    +    +  +     +G   ++   + LVD  ++ G ++ A  ++     + 
Sbjct: 1318 LSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEA 1377

Query: 427  TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            +A     L        D E    V    ++L  +EP       LLS
Sbjct: 1378 SASMYRTLLNACRVQVDRETGKRV---AEKLLALEPSDSAAYVLLS 1420


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 203/656 (30%), Positives = 349/656 (53%), Gaps = 12/656 (1%)

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           KF+    A+++F  M  RS   W +L+K    +  +E VL     M+R EEK +  T  V
Sbjct: 6   KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65

Query: 165 ILEACSLLEDRIFGEQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
            L+AC  L +  +GE IH F  K     ++++VG+SLI MY   G   EA  +F  L   
Sbjct: 66  ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           D+   + M+  + K G    A   F  + ++SD  P+  T   ++S C +      G+ +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           HG  ++ G   ++S+ N+++  Y K    +EA  +F  I+E+++ISW+ +I+ YV++G  
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +A+  F + +D G   + + +  V+  C+   +LE G + H  AI+ G  ++V++ TAL
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF----MEKIADDEEDVMVLFSQQRLA 458
           VD+Y K    + A  +      K    + A++SGF    M   + +E  +M+L +  R  
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR-- 363

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
              PD +   ++L   +    L + +  H+Y IK G+ ++  +G +L+ +Y++CGS+  A
Sbjct: 364 ---PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM-KREGFAPDDISILGVLQACIY 577
            ++F GI+ +D V W ++++ Y +HG G  AL  F  M K     P++++ L +L AC +
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           +GL   G+ +F  +   Y L P LEH+A +VDLLGR G L  A+ +    PFS +P +  
Sbjct: 481 AGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILG 540

Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
           TL+   ++  N + +   +K+L +LE   AG ++L+SN+Y  +G  +   K+R ++    
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRG 600

Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFELQ 753
           + K    S IEI  K+H FVA  + HPE E +Y  L  L+  MK  +++   FE +
Sbjct: 601 IKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDLENCVYFEYE 656



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 234/456 (51%), Gaps = 7/456 (1%)

Query: 73  DLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           ++  G+ +H F+ K  +  +D +  ++LI +Y K  R+  A ++FD +     +TW+S++
Sbjct: 75  EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134

Query: 132 KGYLDDGD-YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            G+  +G  Y++V      +  S+   +  T   ++ AC+ L +   G  +H F I+ GF
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            N++ +  SL++ Y  S  F+EA N+F+ +A KDV   + +I  Y + G +  A  VF  
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++    EPN  T   V+  C     +E+G++ H LA++ G+  E+ V  A+V MY K   
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF-LEFLDLGICCDSSCLATVID 369
            EEA  +F  I  ++++SW ALISG+  +G   ++I  F +  L+     D+  +  V+ 
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS    LE     H + IK+G+ S+  +G +LV++Y++ G L +A  + +G + K T  
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQ-RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           + ++++G+   I       +  F+   + + ++P+ VTF  +LS  +    +  G  +  
Sbjct: 435 WTSLITGY--GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492

Query: 489 YSIKTGYAADVIVGNA-LITMYAKCGSIDGAFQIFK 523
             +     A  +   A L+ +  + G +D A +I K
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 528



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 6/127 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+  +  H++++K G  ++ F   +L+ LY++   L  A K+F+G+ ++  + WTSLI
Sbjct: 380 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 439

Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACS---LLED--RIFGEQIHAFA 185
            GY   G     L     M +S E K NE T   IL ACS   L+ +  RIF   ++ + 
Sbjct: 440 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYR 499

Query: 186 IKSGFEN 192
           +    E+
Sbjct: 500 LAPNLEH 506


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 215/723 (29%), Positives = 364/723 (50%), Gaps = 68/723 (9%)

Query: 83  FLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYES 142
            LL   +  +    N ++N Y K  RL  A +LF  M  R   +W +L+ GY     Y +
Sbjct: 61  LLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLA 120

Query: 143 VLGIACDMYRS-EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI 201
            L     M+RS +   N  T +  +++C  L +R    Q+     K G +++  V  +L+
Sbjct: 121 SLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALV 180

Query: 202 SMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK------------------------ 237
            M+   G    A  +F  +    + C N M++ Y K                        
Sbjct: 181 DMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNM 240

Query: 238 -------AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
                  +G    A  + V + S     +  T+T+ ++ C     +  GKQLH   ++  
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
              +  V +A+V +Y K G  +EA+ +F+++ +RN ++WT LI+G+++ G   +++  F 
Sbjct: 301 PCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFN 360

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
           +     +  D   LAT+I GC    +L LG QLH   +K G +  V +  +L+ +YAK  
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420

Query: 411 DLKSA-------------------------------RMLLDGFSCKYTAEFNAILSGFME 439
           +L+SA                               R   DG S K    +NA+L  +++
Sbjct: 421 NLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQ 480

Query: 440 KIADDEEDVM--VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
             A+++   M  V+ S++    + PD VT+  L    A       G  +   ++K G   
Sbjct: 481 HGAEEDGLRMYNVMLSEK---DVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIL 537

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D  V NA+ITMY+KCG I  A ++F  ++ +DIVSWNAM++ Y+ HG+GK A+ +F+++ 
Sbjct: 538 DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL 597

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
           + G  PD IS + VL  C +SGL + G   F+ +++++ + P LEHF+CMVDLLGRAG L
Sbjct: 598 KRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHL 657

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
           +EA +LI+  P   +  +W  L+S  K+  N++ + LA+K + +L+  D+GS++L++ +Y
Sbjct: 658 TEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIY 717

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           A  G  D++A++R  M D  + K  G SW+E+++K+H F A    HP+   I  KLD L 
Sbjct: 718 ADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELM 777

Query: 738 DEM 740
           +++
Sbjct: 778 EKI 780



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 185/397 (46%), Gaps = 34/397 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +HA ++++    D + A+ L+ LYAK      A+ +F+ +  R+ + WT LI G
Sbjct: 286 LRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAG 345

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +L  G +   + +   M       ++   + ++  C    D   G Q+H+  +KSG    
Sbjct: 346 FLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA 405

Query: 194 VFVGTSLISMYFHSGCFREAENVFR-------------------------------GLAY 222
           V V  SLISMY      + AE++FR                               G++ 
Sbjct: 406 VVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMST 465

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQ 281
           K+V   N M+  Y + G  E    ++  +LS  D  P+  T+  +   C +    + G Q
Sbjct: 466 KNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQ 525

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           + G  VK G++ + SV NA++TMY K G   EA ++FD ++ ++++SW A+I+GY + G 
Sbjct: 526 IIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGM 585

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGT 400
           G +AI  F + L  G   D      V+ GCS    ++ G        + H     +   +
Sbjct: 586 GKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFS 645

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAILSG 436
            +VD+  + G L  A+ L+D    K TAE + A+LS 
Sbjct: 646 CMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSA 682



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 40/300 (13%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK-------------FNRLDV-------- 111
           DL LG+ +H+  LKSG       +N+LI++YAK              N  D+        
Sbjct: 386 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMIT 445

Query: 112 ----------AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
                     A++ FDGM  ++ ITW +++  Y+  G  E  L +   M   ++   +  
Sbjct: 446 AHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWV 505

Query: 162 CSVIL-EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
             V L + C+ L     G+QI    +K G   +  V  ++I+MY   G   EA  VF  L
Sbjct: 506 TYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFL 565

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             KD+   N MI  Y++ G  + A  +F  +L    +P+  ++  V+S C  +  V+EGK
Sbjct: 566 NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 281 QLHGLAVKFGVVREISVG----NAIVTMYGKHGMSEEAERMFDAISERNLIS-WTALISG 335
               +  +   V  IS G    + +V + G+ G   EA+ + D +  +     W AL+S 
Sbjct: 626 SYFDMMKR---VHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSA 682



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 16/169 (9%)

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAAD-------------VIVGNALITMYAKCGSI 515
           RL+++  + A  ++   LHAY +  G   D             VI  N ++  Y K G +
Sbjct: 29  RLVAVGLASAVFLQNTLLHAY-LSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRL 87

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQA 574
             A ++F  +  RD+ SWN ++S Y        +L  F  M R G  +P+  +    +++
Sbjct: 88  SDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKS 147

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           C   G     + L   +++ +G +   +  A +VD+  R G +  A  L
Sbjct: 148 CGALGERSLALQLLGMVQK-FGSQDDSDVAAALVDMFVRCGTVDLASRL 195


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 202/646 (31%), Positives = 340/646 (52%), Gaps = 3/646 (0%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
            N ++++  +F     A K+F  M  R   +W  ++ GY   G  E  L +   M  +  
Sbjct: 132 GNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGA 191

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + + +T   +L +C  + D   G ++HA  ++ G    V V  +L++MY   G    A  
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARK 251

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF G++  D    N MI  + +  E E    +F+H+L  + EPN  T T+V         
Sbjct: 252 VFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSD 311

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           ++  K++H LAVK G   +++  N+++ MY   G   EA  +F  +  R+ +SWTA+ISG
Sbjct: 312 LDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISG 371

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           Y ++G   KA+  +       +  D   +A+ +  C+    L++G++LH  A   G++  
Sbjct: 372 YEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRY 431

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           + +  ALV++YAK   ++ A  +      K    ++++++GF     + E    + + + 
Sbjct: 432 IVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEA---LYYFRH 488

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
            LA ++P+ VTF   L+  A+   L  G+ +HA+ ++ G A++  V NAL+ +Y KCG  
Sbjct: 489 MLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQT 548

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             A+  F     +D+VSWN ML+ +  HG G  AL  F EM   G  PD+++ + +L  C
Sbjct: 549 GYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGC 608

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
             +G+   G  LF+ + + Y + P L+H+ACMVDLL R GRL+E  N IN  P +    +
Sbjct: 609 SRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAV 668

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W  L++  ++  N +   LA+K +L+LEP DAG  +L+S++YA  GM  E +KVR TM  
Sbjct: 669 WGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRV 728

Query: 696 LRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             L  + GCSW+E+   +H F+   + HP+ +EI   LD + + MK
Sbjct: 729 KGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMK 774



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 234/485 (48%), Gaps = 7/485 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++   G  DL +G+ VHA +L+ G   +    N L+ +YAK   ++ A+K+FDGM +
Sbjct: 199 PCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSL 258

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              I+W ++I G+ ++ + E+ L +   M   E + N  T + +  A  LL D  F ++I
Sbjct: 259 TDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEI 318

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA A+K GF  +V    SLI MY   G   EA  VF  +  +D      MI  Y K G  
Sbjct: 319 HALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFP 378

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  V+  +  ++  P+D T  + ++ C     ++ G +LH LA   G +R I V NA+
Sbjct: 379 DKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANAL 438

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V MY K  + E+A  +F  + ++++ISW+++I+G+  +    +A+  F   L   +  +S
Sbjct: 439 VEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML-ADVKPNS 497

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                 +  C+   +L  G ++H   ++ G  S+  +  AL+D+Y K G    A      
Sbjct: 498 VTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGA 557

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL-AGMEPDPVTFSRLLSLSASQACL 480
              K    +N +L+GF   +A    D+ + F  + L  G  PD VTF  LL   +    +
Sbjct: 558 HGTKDVVSWNIMLAGF---VAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMV 614

Query: 481 VRGRSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
            +G  L H+ + K     ++     ++ + ++ G +   +     +    D   W A+L+
Sbjct: 615 SQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLN 674

Query: 539 AYALH 543
              +H
Sbjct: 675 GCRIH 679



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 190/375 (50%), Gaps = 4/375 (1%)

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA A    F   + +G +++SM    G    A  VF  +  +DV   N M+  Y KAG  
Sbjct: 119 HADAAHGTF--GLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFL 176

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           E A  ++  +L +   P+ YTF  V+  C     +  G+++H   ++FG+  E+ V NA+
Sbjct: 177 EEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNAL 236

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           VTMY K G  E A ++FD +S  + ISW A+I+G+  +      +  FL  L+  +  + 
Sbjct: 237 VTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNL 296

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             + +V     + S+L+   ++H  A+K G+ +DV    +L+ +Y+  G +  A  +   
Sbjct: 297 MTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSR 356

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              +    + A++SG+ +    D+   + +++   +  + PD VT +  L+  AS   L 
Sbjct: 357 METRDAMSWTAMISGYEKNGFPDK--ALEVYALMEVNNVSPDDVTVASALAACASLGRLD 414

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G  LH  +   G+   ++V NAL+ MYAK   I+ A ++FK + D+D++SW++M++ + 
Sbjct: 415 VGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFC 474

Query: 542 LHGLGKGALLLFEEM 556
            +     AL  F  M
Sbjct: 475 FNHKNFEALYYFRHM 489



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 193/391 (49%), Gaps = 4/391 (1%)

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L SS   P++  +  +  +C      E G +  G A        + +GNA+++M  + G 
Sbjct: 85  LESSPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGE 144

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
           +  A ++F  + ER++ SW  ++ GY ++G   +A++ +   L  G   D      V+  
Sbjct: 145 TWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRS 204

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C    +L +G ++H   ++ G   +V +  ALV +YAK GD+++AR + DG S      +
Sbjct: 205 CGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISW 264

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NA+++G  E    + E  + LF       +EP+ +T + +   S   + L   + +HA +
Sbjct: 265 NAMIAGHFEN--HECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALA 322

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +K G+A DV   N+LI MY+  G +  A  +F  +  RD +SW AM+S Y  +G    AL
Sbjct: 323 VKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKAL 382

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            ++  M+    +PDD+++   L AC   G  + GI L +E+    G    +     +V++
Sbjct: 383 EVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKL-HELATSKGFIRYIVVANALVEM 441

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             ++  + +A+ +    P  +  + W ++++
Sbjct: 442 YAKSKIIEKAIEVFKYMP-DKDVISWSSMIA 471


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 207/688 (30%), Positives = 355/688 (51%), Gaps = 15/688 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG  V   ++KSG       AN+LI+++   + ++ A  +FD M  R  I+W S+I 
Sbjct: 175 DKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIIT 234

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
             + +G  E  L     M  +  K +  T S +L  C   ++  +G  +H   +KSG E+
Sbjct: 235 ASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLES 294

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NV V  SL+SMY  +G   +AE VF  +  +D+   N M+  +   G    A  + + +L
Sbjct: 295 NVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEML 354

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +    N  TFT  +S CY    +E  K +H   +  G+   + +GNA+VTMYGK G   
Sbjct: 355 QTRKATNYVTFTTALSACY---NLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMA 411

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG-C 371
            A+R+   + +R+ ++W ALI G+  +     AI  F    + G+  +   +  ++    
Sbjct: 412 AAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFL 471

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S    L+ G+ +H   +  G+  +  + ++L+ +YA+ GDL ++  + D  + K ++ +N
Sbjct: 472 SPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWN 531

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           AILS          E+ + L  + R  G+  D  +FS   ++  +   L  G+ LH+  I
Sbjct: 532 AILSANAHY--GPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLII 589

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+ ++  V NA + MY KCG ID  F+I      R   SWN ++SA A HG  + A  
Sbjct: 590 KHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQARE 649

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
            F EM   G  PD ++ + +L AC + GL + G+  F+ +   +G+   +EH  C++DLL
Sbjct: 650 AFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLL 709

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAG+L+EA N IN  P   + L+WR+L++  K+  N + +  A+ RL +L+  D  +++
Sbjct: 710 GRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYV 769

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L SN+ A      +   VR  M    + K+  CSW+++ +++  F    + HP++ EIY+
Sbjct: 770 LYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYA 829

Query: 732 KLDLLNDEMKLKVKDS-----SAFELQD 754
           KL    +E+K  ++++     +++ LQD
Sbjct: 830 KL----EELKKIIREAGYMPDTSYSLQD 853



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 311/627 (49%), Gaps = 29/627 (4%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           VHA ++K G   D F   +L++ Y  F  +     +F  +   + ++WTSL+ GY  +G 
Sbjct: 81  VHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGC 140

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            + V+ +   + R     NE+  + ++ +C +L D++ G Q+    IKSG +  V V  S
Sbjct: 141 VKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANS 200

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           LISM+ +     EA  VF  +  +D    N +I      G  E +   F  +  +  + +
Sbjct: 201 LISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTD 260

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T + ++ VC     +  G+ LHG+ VK G+   + V N++++MY + G SE+AE +F 
Sbjct: 261 YITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFH 320

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            + ER+LISW ++++ +V +G+  +A+   +E L      +     T +   S C NLE 
Sbjct: 321 KMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTAL---SACYNLET 377

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
              +H F I  G   ++ +G ALV +Y K G + +A+ +      +    +NA++ G   
Sbjct: 378 LKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGH-- 435

Query: 440 KIADDEEDVMVL--FSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSLHAYSIKTGYA 496
             AD++E    +  F+  R  G+  + +T   LLS   S   L+  G  +HA+ +  G+ 
Sbjct: 436 --ADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFE 493

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +  V ++LITMYA+CG ++ +  IF  +++++  +WNA+LSA A +G G+ AL L  +M
Sbjct: 494 LETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKM 553

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH--------FACMV 608
           + +G   D  S   V  A I      G + L +E +Q++ L  I++H            +
Sbjct: 554 RNDGIHLDQFS-FSVAHAII------GNLTLLDEGQQLHSL--IIKHGFESNDYVLNATM 604

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK-DA 667
           D+ G+ G + +   ++   P S S   W  L+S        + +  A   +LDL  + D 
Sbjct: 605 DMYGKCGEIDDVFRIL-PQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDH 663

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMN 694
            +F+ + +  +  G++DE     ++M+
Sbjct: 664 VTFVSLLSACSHGGLVDEGLAYFSSMS 690



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 237/477 (49%), Gaps = 12/477 (2%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y+KF  ++ AQ +FD M  R+  +W +L+ G++  G Y+  +   C M     + + + 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 162 CSVILEACS---LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR 218
            + ++ AC     + +  F  Q+HA  IK G   +VFVGTSL+  Y   G   E + VF+
Sbjct: 61  AASLVTACDRSGCMTEGAF--QVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFK 118

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            +   ++     +++ Y   G  +    V+  L       N+     VI  C   +    
Sbjct: 119 EIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKML 178

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G Q+ G  +K G+   +SV N++++M+G     EEA  +FD + ER+ ISW ++I+  V 
Sbjct: 179 GYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVH 238

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +GH  K++  F +        D   ++ ++  C    NL  G  LHG  +K G  S+V +
Sbjct: 239 NGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCV 298

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE-DVMVLFSQQRL 457
             +L+ +Y++ G  + A  +      +    +N++++  ++        ++++   Q R 
Sbjct: 299 CNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRK 358

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           A    + VTF+  LS   +   L   + +HA+ I  G   ++I+GNAL+TMY K GS+  
Sbjct: 359 A---TNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAA 412

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           A ++ K + DRD V+WNA++  +A +     A+  F  ++ EG   + I+I+ +L A
Sbjct: 413 AQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 242/506 (47%), Gaps = 28/506 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +   + +L+ G+ +H  ++KSG +++    N+L+++Y++  + + A+ +F  M  R 
Sbjct: 267 LLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERD 326

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+W S++  ++D+G+Y   L +  +M ++ +  N  T +  L AC  LE     + +HA
Sbjct: 327 LISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHA 383

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           F I  G  +N+ +G +L++MY   G    A+ V + +  +D    N +I  +    E   
Sbjct: 384 FVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNA 443

Query: 244 AFHVFVHLLSSDFEPNDY-TFTNVIS--VCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           A   F +LL  +  P +Y T  N++S  +  ++L ++ G  +H   V  G   E  V ++
Sbjct: 444 AIEAF-NLLREEGVPVNYITIVNLLSAFLSPDDL-LDHGMPIHAHIVVAGFELETFVQSS 501

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++TMY + G    +  +FD ++ +N  +W A++S     G G +A+   ++  + GI  D
Sbjct: 502 LITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLD 561

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               +         + L+ G QLH   IKHG+ S+  +  A +D+Y K G++     +L 
Sbjct: 562 QFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILP 621

Query: 421 GFSCKYTAEFNAILS-----GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
               +    +N ++S     GF ++  +   +++ L       G+ PD VTF  LLS  +
Sbjct: 622 QPRSRSQRSWNILISALARHGFFQQAREAFHEMLDL-------GLRPDHVTFVSLLSACS 674

Query: 476 SQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG--ISDRDIVS 532
               +  G +   + S K G    +     +I +  + G +  A        +   D+V 
Sbjct: 675 HGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLV- 733

Query: 533 WNAMLSAYALHG----LGKGALLLFE 554
           W ++L+A  +HG      K A  LFE
Sbjct: 734 WRSLLAACKIHGNLELARKAADRLFE 759



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY+K GSI+ A  +F  + +R+  SWN ++S +   G  + A+  F  M   G  P    
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 568 ILGVLQACIYSG-LSEGG 584
              ++ AC  SG ++EG 
Sbjct: 61  AASLVTACDRSGCMTEGA 78


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 189/613 (30%), Positives = 326/613 (53%), Gaps = 2/613 (0%)

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           ++ G+   GDY +  G   ++ R   + + +T   ++ AC  L++   G  IH    K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            + + FV  +L+ MY       +A  +F  +  +D+     MI  Y + G++  +  +F 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +      P+      V+  C +   + + + +     +     ++ +G A++ MY K G
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E A  +FD + E+N+ISW+A+I+ Y   G G KA++ F   L  G+  D   LA+++ 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS   NL++G  +H    K G   D  +  ALVD+Y K  +++ AR L D    +    
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +  ++ G+ E    +  + +VLF + R  G+ PD V    ++   A    + + R++  Y
Sbjct: 301 WTVMIGGYAE--CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
             +  +  DVI+G A+I M+AKCG ++ A +IF  + +++++SW+AM++AY  HG G+ A
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LF  M R G  P+ I+++ +L AC ++GL E G+  F+ + + Y +R  ++H+ C+VD
Sbjct: 419 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 478

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGRAGRL EA+ LI S    +   LW   +   +   +   +  A+  LL+L+P++ G 
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGH 538

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           +IL+SN+YA  G  ++ AK R  M+  RL K  G +WIE+D+K H F      HP S+EI
Sbjct: 539 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEI 598

Query: 730 YSKLDLLNDEMKL 742
           Y  L  L ++++L
Sbjct: 599 YEMLKSLGNKLEL 611



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 236/489 (48%), Gaps = 14/489 (2%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++      +L++G+ +H  + K G   D F    L+++Y K   ++ A+ LFD M  
Sbjct: 34  PFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQE 93

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  +TWT +I GY + G     L +   M       ++     ++ AC+ L        I
Sbjct: 94  RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARII 153

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
             +  +  F+ +V +GT++I MY   GC   A  +F  +  K+V   + MI  Y   G+ 
Sbjct: 154 DDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 213

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A  +F  +LSS   P+  T  +++  C +   ++ G+ +H +  KFG+  +  V  A+
Sbjct: 214 RKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAAL 273

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V MYGK    E+A  +FD + ER+L++WT +I GY   G+  +++  F +  + G+  D 
Sbjct: 274 VDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDK 333

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             + TV+  C+    +     +  +  +  +  DV LGTA++D++AK G ++SAR + D 
Sbjct: 334 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 393

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    ++A+++ +           + LF     +G+ P+ +T   LL  + S A LV
Sbjct: 394 MEEKNVISWSAMIAAY--GYHGQGRKALDLFPMMLRSGILPNKITLVSLL-YACSHAGLV 450

Query: 482 ----RGRSL--HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWN 534
               R  SL    YS++    ADV     ++ +  + G +D A ++ + ++ ++D   W 
Sbjct: 451 EEGLRFFSLMWEDYSVR----ADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWG 506

Query: 535 AMLSAYALH 543
           A L A   H
Sbjct: 507 AFLGACRTH 515


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 241/778 (30%), Positives = 378/778 (48%), Gaps = 82/778 (10%)

Query: 19  SLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQ 78
           SLP LK K P+   +        +  S +S +    + LF+        S+ S +L    
Sbjct: 23  SLPRLKPKPPLLFLT-------TFFFSTASSTTDLTSTLFHQCK-----SLASAEL---- 66

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNR----LDVAQKLFDGMLVRSAITWTSLIKGY 134
             H  LL  G  +D     ++I++Y  FN     L V ++L       +   W  LI+  
Sbjct: 67  -THQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPS--SHTVFWWNQLIRRS 120

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           +  G  E VL +   M R   + + +T   +L+AC  +     G  +HA    SGFE NV
Sbjct: 121 VHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNV 180

Query: 195 FVGTSLISMYFHSGCFREAENVF---RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           FVG  L+SMY   G +  A  VF   R     D+   N ++  Y + G+S  A  +F  +
Sbjct: 181 FVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERM 240

Query: 252 LSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
                  P+  +  NV+  C        GKQ+HG A++ G+  ++ VGNA+V MY K GM
Sbjct: 241 TEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGM 300

Query: 311 SEEAERMF------DAIS-----------------------------ERNLISWTALISG 335
            EEA ++F      D +S                             E N+++W+A+I+G
Sbjct: 301 MEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAG 360

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK------ 389
           Y + G G +A++ F + L  G   +   L +++ GC+    L  G + H  AIK      
Sbjct: 361 YAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLD 420

Query: 390 -HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK--YTAEFNAILSGFMEKIADDEE 446
            +    D+ +  AL+D+Y+K    K+AR + D    K      +  ++ G  +    +  
Sbjct: 421 ENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH--GEAN 478

Query: 447 DVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-AADVIVGN 503
           + + LFSQ  Q    + P+  T S  L   A    L  GR +HAY ++  + +A + V N
Sbjct: 479 EALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVAN 538

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
            LI MY+K G +D A  +F  +  R+ VSW ++++ Y +HG G+ AL +F EM++    P
Sbjct: 539 CLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVP 598

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           D ++ + VL AC +SG+ + GI  FN + + +G+ P  EH+ACMVDLL RAGRL EAM L
Sbjct: 599 DGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMEL 658

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
           I   P   +P +W  L+S  ++ AN +    A+ +LL+LE  + GS+ L+SN+YA     
Sbjct: 659 IRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCW 718

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            + A++R  M +  + K  GCSW++       F A    HP S++IY   DLL D M+
Sbjct: 719 KDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIY---DLLRDLMQ 773


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 214/711 (30%), Positives = 367/711 (51%), Gaps = 41/711 (5%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV-AQKLFDGMLVRSAITWTS 129
           SG+L  G++VH +++KSG + DTF  N L+++YAK   +   A  +FD ++ +  ++W +
Sbjct: 153 SGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNA 212

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI---FGEQIHAFAI 186
           +I G  ++G  +    +   M +   K N  T + IL  C+  ++ I    G QIH++ +
Sbjct: 213 MIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVL 272

Query: 187 K-SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           +      +V V  +L+S Y   G  +EAE++F  +  +D+   N +I  Y   GE   + 
Sbjct: 273 QWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSL 332

Query: 246 HVFVHLLSSDFEPND-YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE-ISVGNAIVT 303
           HVF +L+S +    D  T  +++  C +   ++ GKQ+H   ++   + E  S GNA+V+
Sbjct: 333 HVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVS 392

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K G  EEA   F  IS ++LISW +++  +    H  + ++     L L I  DS  
Sbjct: 393 FYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVT 452

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYL---SDVRLGTALVDIYAKGGDLKSARMLLD 420
           + T+I  C+    ++   ++HG++I+ G L   +   +G A++D Y+K G+++ A  +  
Sbjct: 453 ILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQ 512

Query: 421 GFSCKYT-AEFNAILSGF--------------------------MEKI---ADDEEDVMV 450
             S K      N+++SG+                          M ++    D  E  + 
Sbjct: 513 NLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALE 572

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           LF + +  GM+PD VT   L+ +    A +   R  H Y I++ +  D+ +   L+  YA
Sbjct: 573 LFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKGTLLDAYA 631

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG I  A++IF+   D+D+V + AM+  YA+HG+ + AL  F  M   G  PD +    
Sbjct: 632 KCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTS 691

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           +L AC ++G    G+ +F+ IE+I+G++P +E FAC+VDLL R G +SEA + +   P  
Sbjct: 692 ILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIE 751

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
            +  +W TL+   K     +   + + +L  +E  D G++I++SN+YA     D   +VR
Sbjct: 752 ANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVR 811

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             M +  L K AGCSWIE++   + FV     HP+   IYS L  L+ ++K
Sbjct: 812 KMMRNKDLKKPAGCSWIEVERTNNIFVVGDCSHPQRNLIYSTLCTLDQQVK 862



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 161/544 (29%), Positives = 273/544 (50%), Gaps = 46/544 (8%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           LG+ +H++++K G  +    +  L+N+YAK   LD   KLFD       + W  ++ GY 
Sbjct: 55  LGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 114

Query: 136 DDGDYES-VLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
             G  ++ V+ +   M+ S E   +  T + +L  C+   +   G+ +H + IKSGFE +
Sbjct: 115 RSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMD 174

Query: 194 VFVGTSLISMYFHSGCFR-EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            F G +L+SMY   G    +A  VF  + +KDV   N MI    + G  + AF +F  ++
Sbjct: 175 TFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMM 234

Query: 253 SSDFEPNDYTFTNVISVCY---ENLGVEEGKQLHGLAVKFG-VVREISVGNAIVTMYGKH 308
               +PN  T  N++ VC    EN+    G+Q+H   +++  +  ++SV NA+++ Y K 
Sbjct: 235 KGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKV 294

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-ICCDSSCLATV 367
           G ++EAE +F A+  R+L+SW  +I+GY  +G   K+++ F   + L  +  DS  + ++
Sbjct: 295 GRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSI 354

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           +  C+   NL+ G Q+H + ++H +L  D   G ALV  YAK G ++ A       S K 
Sbjct: 355 LPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKD 414

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N+IL  F EK        + L        + PD VT   ++   AS   + + + +
Sbjct: 415 LISWNSILDAFGEK--RHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEI 472

Query: 487 HAYSIKTGY---AADVIVGNALITMYAKCGSIDGA---FQ-------------------- 520
           H YSI++G    A    VGNA++  Y+KCG+I+ A   FQ                    
Sbjct: 473 HGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVG 532

Query: 521 ---------IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
                    IF G+S+ D+ +WN M+  YA +   + AL LF +++ +G  PD ++I+ +
Sbjct: 533 LGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSL 592

Query: 572 LQAC 575
           +  C
Sbjct: 593 IPVC 596



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 221/464 (47%), Gaps = 17/464 (3%)

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFGEQIH 182
           +TW S I+    D  +   L       +    F  +    + IL++CS L     G+ +H
Sbjct: 1   MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           ++ +K G  +      +L++MY   G   +   +F      D    N ++  Y+++G+++
Sbjct: 61  SYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKND 120

Query: 243 M-AFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
                VF  + SS +  P+  T   V+ VC  +  +  GK +HG  +K G   +   GNA
Sbjct: 121 ADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNA 180

Query: 301 IVTMYGKHGM-SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +V+MY K G+ + +A  +FD+I  ++++SW A+I+G   +G   +A + F   +   +  
Sbjct: 181 LVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKP 240

Query: 360 DSSCLATVIDGC-SVCSNL--ELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSA 415
           + + +A ++  C S   N+    G Q+H + ++   LS DV +  AL+  Y K G  K A
Sbjct: 241 NYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEA 300

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP---DPVTFSRLLS 472
             L      +    +N I++G+    A + E +  L     L  +E    D VT   +L 
Sbjct: 301 ESLFWAMDARDLVSWNTIIAGY----ALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILP 356

Query: 473 LSASQACLVRGRSLHAYSIKTGYA-ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
             A    L  G+ +HAY ++  +   D   GNAL++ YAKCG I+ A+  F  IS +D++
Sbjct: 357 ACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLI 416

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           SWN++L A+         L L   M +    PD ++IL ++  C
Sbjct: 417 SWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFC 460



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           A  +PD    + +L   ++      G+ LH+Y +K G+ +  +   AL+ MYAKCG +D 
Sbjct: 31  AAFKPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDD 90

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL-LFEEMKREG-FAPDDISILGVLQAC 575
             ++F      D V WN +LS Y+  G     ++ +F  M   G   P  ++I  VL  C
Sbjct: 91  CHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVC 150

Query: 576 IYSGLSEGG 584
             SG   GG
Sbjct: 151 ARSGNLNGG 159


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 204/643 (31%), Positives = 338/643 (52%), Gaps = 7/643 (1%)

Query: 77  GQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           G  +HA  L+ G    D F  N L+  YA   R   A+++FD M  R  ++W SL+   L
Sbjct: 137 GAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALL 196

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            +G  E        M RS    N  +   IL AC    D  FG  +H   +K G  + V 
Sbjct: 197 TNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVN 256

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +G +L+ MY   G    + +VF G+  K+    N  I  +  AG  E    +F  +   D
Sbjct: 257 LGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHD 316

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P   T ++++    +      GK+LHG +++  V  +I + N ++ MY K G SE+A 
Sbjct: 317 VTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKAS 376

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F+ I  RN++SW A+I+   ++G   +A    +E    G C +S  L  ++  CS  +
Sbjct: 377 AIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVA 436

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           ++++G Q+H ++I+   +SD+ +  AL+D+YAK G L  AR + D  S K    +N ++ 
Sbjct: 437 SVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIV 495

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+ +     E   + LF Q RLAG+E D V+F   LS  ++ +   +G+ +H   +K   
Sbjct: 496 GYSQSQCCFES--LHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLL 553

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +   + N+L+ +Y K G +D A +IF  I+ +D+ SWN M+  Y +HG    A  LF+ 
Sbjct: 554 DSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDL 613

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNE-IEQIYGLRPILEHFACMVDLLGRA 614
           MK +G   D +S + VL  C + GL + G   F++ I Q   ++P   H+ACMVDLLGRA
Sbjct: 614 MKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ--NIKPQQMHYACMVDLLGRA 671

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G+LSE+  +I + PF  +  +W  L+   ++  + + + LA++ L +L+P+++G + L+ 
Sbjct: 672 GQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLR 731

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           NMY+  GM +EA  V+  M   ++ K    SW++  +KL  F+
Sbjct: 732 NMYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFL 774



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 229/475 (48%), Gaps = 8/475 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D   G  VH  +LK G  +     N L+++Y KF  L+ +  +F+GM  ++ ++W S I 
Sbjct: 235 DEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIG 294

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            +   G +E VL +   M   +      T S +L A   L     G+++H ++I+   E+
Sbjct: 295 CFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVES 354

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           ++F+  +L+ MY   GC  +A  +F  +  ++V   N MI    + G    AF + + + 
Sbjct: 355 DIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQ 414

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +   PN +T  N++  C     V+ GKQ+H  +++  ++ ++ V NA++ +Y K G   
Sbjct: 415 KNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLN 474

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +FD  SE++ +S+  LI GY +S    ++++ F +    GI  D+      +  CS
Sbjct: 475 LARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACS 533

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             S  + G ++HG  +K    S   L  +L+D+Y KGG L +A  + +  + K  A +N 
Sbjct: 534 NLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNT 593

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++ G+   +    +    LF   +  G+E D V++  +LS+ +    + RG+   +  I 
Sbjct: 594 MILGY--GMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIA 651

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR---DIVSWNAMLSAYALHG 544
                  +    ++ +  + G +  + +I + +  R   D+  W A+L +  +HG
Sbjct: 652 QNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDV--WGALLGSCRIHG 704



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 190/410 (46%), Gaps = 8/410 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P LV +    G   LG+ +H + ++   ++D F AN L+++YAKF   + A  +F+ + V
Sbjct: 329 PALVDL----GYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEV 384

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R+ ++W ++I     +G       +  +M ++ E  N  T   +L ACS +     G+QI
Sbjct: 385 RNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQI 444

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA++I+    +++FV  +LI +Y   G    A  +F   + KD    N +I+ Y+++   
Sbjct: 445 HAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIF-DRSEKDGVSYNTLIVGYSQSQCC 503

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             + H+F  +  +  E +  +F   +S C      ++GK++HG+ VK  +     + N++
Sbjct: 504 FESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSL 563

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + +Y K GM + A ++F+ I+++++ SW  +I GY   G    A   F    D GI  D 
Sbjct: 564 LDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDH 623

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                V+  CS    ++ G +     I             +VD+  + G L  +  ++  
Sbjct: 624 VSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRN 683

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
              +  ++    L G      D E   +   + + L  ++P+   +  LL
Sbjct: 684 MPFRANSDVWGALLGSCRIHGDIE---LARLAAEHLFELKPENSGYYTLL 730


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 207/661 (31%), Positives = 341/661 (51%), Gaps = 5/661 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K+   S D+  G  VH  + K G   D +  N L+ LY     L+ A++LFD M  
Sbjct: 14  PFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPE 73

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           R  ++W ++I     +GDY         M  RS  K N  +   +L   + LED     +
Sbjct: 74  RDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRR 133

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH +++K G ++ V    +L+  Y   G  +    VF     K+    N +I      G 
Sbjct: 134 IHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGR 193

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A + F  ++ +  +PN  T ++++ V  E    + GK++HG +++ G   +I + N+
Sbjct: 194 CWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANS 253

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K G S EA  +F  +  RN++SW A+I+ Y  +    +AI   ++  + G C +
Sbjct: 254 LIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPN 313

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +     V+  C+    L  G ++H   ++ G  SD+ +  +L+D+YAK G L SAR + +
Sbjct: 314 AVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN 373

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             S K    +N ++ G+ E   DD    + LFS+ RL G +PD V+F  ++S  A+ A L
Sbjct: 374 T-SRKDEVSYNILIIGYSE--TDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAAL 430

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            +G+ +H  +++    + + V N+L+  Y KCG ID A ++F  I  +D+ SWN M+  Y
Sbjct: 431 KQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGY 490

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
            + G  + A+ +FE M+ +    D +S + VL AC + GL E G   F+E+     L P 
Sbjct: 491 GMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEM-LAQRLEPT 549

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
             H+ CMVDLLGRAG + EA  LI   P +    +W  L+   ++  N +    A++ L 
Sbjct: 550 EMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLF 609

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L+P+  G +IL+SN+YA  G  DEA K+R  M      K  GCSW++I  ++H FVA  
Sbjct: 610 ELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEE 669

Query: 721 K 721
           +
Sbjct: 670 R 670



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 244/496 (49%), Gaps = 14/496 (2%)

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M R   + ++HT   +L+ CS   D   G ++H    K GF+ +V+VG +L+ +Y + G 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGE-SEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
             +A  +F  +  +DV   N +I   +  G+ +E   + F  +L S  +PN  +  +++ 
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
           +       E  +++H  +VK G+  +++  NA+V  YGK G  +   ++F+   E+N +S
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           W ++I+G    G    A+N F   +D G   +S  +++++         + G ++HGF++
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           + G  +D+ +  +L+D+YAK G    A  +      +    +NA+++ +       E   
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 300

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
            V+  Q +  G  P+ VTF+ +L   A    L  G+ +HA  ++ G  +D+ V N+LI M
Sbjct: 301 FVI--QMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDM 358

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           YAKCG +  A  +F   S +D VS+N ++  Y+       +L LF EM+  G  PD +S 
Sbjct: 359 YAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 417

Query: 569 LGVLQACI-YSGLSEGGICLFNEIEQIYGLRPILEHF---ACMVDLLGRAGRLSEAMNLI 624
           +GV+ AC   + L +G      E+  +     +  H      ++D   + GR+  A  L 
Sbjct: 418 VGVISACANLAALKQG-----KEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLF 472

Query: 625 NSSPFSESPLLWRTLV 640
           N   F +    W T++
Sbjct: 473 NQILFKDVA-SWNTMI 487


>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 214/659 (32%), Positives = 349/659 (52%), Gaps = 6/659 (0%)

Query: 93  TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
           T   N++++ Y K   LD A  +FD M  R +++W  +I G+L  G  +  L        
Sbjct: 70  TSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARV 129

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
              + N  T  + + AC  L     G ++H + I+SGF +   V  SL+SMY  +   R 
Sbjct: 130 IAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADNDMER- 188

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCY 271
           AE +F  +  +DV   + MI  Y + GE++MA  +F+ + S +  E +  T  +V+  C 
Sbjct: 189 AEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACA 248

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
               +  G+ +HG+ +  G+  ++ VGN+I+ MY K    E A + F+ +  RN +SW +
Sbjct: 249 NTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNS 308

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           +ISG VR+    +A++ F      G   D   L  ++  C    +      +H   I+ G
Sbjct: 309 IISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWG 368

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
           Y  +  +  +L+D Y+K   ++ A  L D    K T  ++A+++GF      DE   + L
Sbjct: 369 YELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDE--AIAL 426

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           F +   A  +P+ VT   LL   +  A L R +  H  +I+ G AA+V VG A++ MYAK
Sbjct: 427 FQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAK 486

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           CG I  + + F  I +++IVSW AM++A  ++GL + AL L  EMK  G  P+ ++ L V
Sbjct: 487 CGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSV 546

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP--F 629
           L AC + GL E G+  F  + Q +G+ P LEH++CMVD+L RAG+L+ AMNLI   P   
Sbjct: 547 LSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERM 606

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
            +   LW  L+S  +   NS+    A+ R+L+LEP+ +  + L S+MYA  G+  +AA++
Sbjct: 607 RDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARM 666

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSS 748
           R  +    +   AG S + ++ K   FVA  + HP + EI+  ++ L+D MK+  ++ S
Sbjct: 667 RWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGVVEQLHDCMKIAERNES 725



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 244/500 (48%), Gaps = 13/500 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G ++ G  +H ++++SG  +     N+L+++YA  N ++ A++LFD M  R  I+W+ +I
Sbjct: 150 GAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMI 208

Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GY+  G+ +  L +  +M  +   + +  T   +L+AC+   D   G  +H   I  G 
Sbjct: 209 GGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGL 268

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + ++FVG S+I MY        A   F  +  ++    N +I    +  +   A  +F  
Sbjct: 269 DYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYS 328

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  + F  ++ T  N++  C   +   + K +H + +++G      V N+++  Y K  +
Sbjct: 329 MGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDL 388

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A ++FD +  ++ +SW+A+I+G+   G   +AI  F E        +   + ++++ 
Sbjct: 389 IELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEA 448

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            SV ++L+     HG AI+ G  ++V +GTA++D+YAK G++  +R   D    K    +
Sbjct: 449 FSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSW 508

Query: 431 NAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
            A+++   M  +A    D + L S+ +L G++P+ VT   +LS  +    +  G S    
Sbjct: 509 GAMIAACGMNGLA---RDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFEN 565

Query: 490 SIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR---DIVSWNAMLSAYALHG- 544
            ++  G    +   + ++ M ++ G ++ A  + + + +R       W A+LSA    G 
Sbjct: 566 MVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGN 625

Query: 545 --LGKGALLLFEEMKREGFA 562
             LG GA     E++ +  A
Sbjct: 626 SRLGAGAAFRVLELEPQSSA 645



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 178/358 (49%), Gaps = 1/358 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    +GD+ +G++VH  ++  G   D F  N++I++Y+K +  + A K F+ M  R+
Sbjct: 243 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRN 302

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W S+I G +    +   L +   M ++  + +E T   +L++C    D    + IH+
Sbjct: 303 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHS 362

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+ G+E N FV  SLI  Y        A  +F  L  KD    + MI  +N  G+ + 
Sbjct: 363 IVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDE 422

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +  +  +PN  T  +++     +  ++  K  HG+A++ G+  E++VG AI+ 
Sbjct: 423 AIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILD 482

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G    + + FD I E+N++SW A+I+    +G    A+    E    G+  +   
Sbjct: 483 MYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVT 542

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
             +V+  CS    +E GL      ++ HG    +   + +VD+ ++ G L SA  L++
Sbjct: 543 TLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIE 600



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%)

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           L A S   G+ +    GN+++  Y K G++D A  +F  +  RD VSWN M+  +   G 
Sbjct: 57  LKACSSLPGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 116

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
               L  F + +   F P+  +++  + AC   G  E G+
Sbjct: 117 SDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGL 156


>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 213/677 (31%), Positives = 360/677 (53%), Gaps = 17/677 (2%)

Query: 74  LKLGQAVHAFLLKSGS---QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           L+  + +HA +L + +       F  NN++++YA+   L  +  +FD M  R+ +++ +L
Sbjct: 26  LREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPRRTIVSYNAL 85

Query: 131 IKGYLDDGDYESV--LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           +  Y       ++  L +   M  +  + +  T + +L+A SLLE   FG  +HA   K 
Sbjct: 86  LAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKL 145

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  N++ + TSL++MY + G    AE VF  +  +D    N +I+ Y K  + E    +F
Sbjct: 146 GL-NDICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLF 204

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           + ++S  F P  +T+  V++ C        G+ +H   +   V  ++ + NA+V MY   
Sbjct: 205 IKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNA 264

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC----DSSCL 364
           G  + A R+F  +   +L+SW ++I+GY  +  G KA+N F++  ++   C    D    
Sbjct: 265 GNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEM---CFPKPDDYTY 321

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           A +I    V  +   G  LH   IK G+   V +G+ LV +Y K  +  +A  +    S 
Sbjct: 322 AGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISV 381

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    +  +++G+  K+ D    +   F Q    G E D    S +++  A+ A L +G 
Sbjct: 382 KDVVLWTEMITGY-SKMTDGICAIRCFF-QMVHEGHEVDDYVLSGVVNACANLAVLRQGE 439

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +H Y++K GY  ++ V  +LI MYAK GS++ A+ +F  +S+ D+  WN+ML  Y+ HG
Sbjct: 440 IIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHG 499

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
           + + AL +FEE+ ++G  PD ++ L +L AC +S L E G  L+N +  I GL P L+H+
Sbjct: 500 MVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSI-GLIPGLKHY 558

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKRLLDLE 663
           +CMV L  RA  L EA  +IN SP+ E  L LWRTL+S   +  N K  I A++ +L L+
Sbjct: 559 SCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHAAEEVLRLK 618

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
            +D  + +L+SN+YA     D+ A++R  M  L L K  G SWIE  + +H F +  + H
Sbjct: 619 AEDGPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKYPGLSWIEAKNDIHVFSSGDQSH 678

Query: 724 PESEEIYSKLDLLNDEM 740
           P+++E++++L  L   M
Sbjct: 679 PKADEVHAELHRLKRNM 695



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 174/349 (49%), Gaps = 1/349 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D + G+ +HA ++      D    N L+++Y     +  A ++F  M     ++W S+I 
Sbjct: 231 DYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIA 290

Query: 133 GYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           GY ++ D E  + +   +      K +++T + I+ A  +     +G+ +HA  IK+GFE
Sbjct: 291 GYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFE 350

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VFVG++L+SMYF +     A  VF  ++ KDV     MI  Y+K  +   A   F  +
Sbjct: 351 RSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQM 410

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           +    E +DY  + V++ C     + +G+ +H  AVK G   E+SV  +++ MY K+G  
Sbjct: 411 VHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSL 470

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E A  +F  +SE +L  W +++ GY   G   +A+  F E L  G+  D     +++  C
Sbjct: 471 EAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSAC 530

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S    +E G  L  +    G +  ++  + +V ++++   L+ A  +++
Sbjct: 531 SHSRLVEQGKFLWNYMNSIGLIPGLKHYSCMVTLFSRAALLEEAEEIIN 579


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 214/672 (31%), Positives = 366/672 (54%), Gaps = 22/672 (3%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           +LKSG  +D +  + L++ +A+   LD A+ ++ G+  R+A+T   LI G +     E+ 
Sbjct: 304 VLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAA 363

Query: 144 LGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIF-GEQIHAFAIKSG-FENNVFVGT 198
             I     R     N  T  V+L A    S  E  +  G ++HA  +++G     + V  
Sbjct: 364 AEIFMGA-RDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSN 422

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
            L++MY   G   +A  VF+ +  +D    N +I   ++ G  E A   +  +  +   P
Sbjct: 423 GLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGP 482

Query: 259 NDYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           +++   + +S C   LG+   G+QLH  AVK+G+  + SV NA+V MYG+ G   E   +
Sbjct: 483 SNFAAISGLSSC-AGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEI 541

Query: 318 FDAISERNLISWTALISGYVRSGHG--GKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           F+++S  +++SW +++ G + S      +++  F   +  G+  +       +   +  S
Sbjct: 542 FNSMSAHDVVSWNSIM-GVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLS 600

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA-EFNAIL 434
            LELG Q+H   +KHG   D  +  AL+  YAK GD+ S   L    S +  A  +N+++
Sbjct: 601 VLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMI 660

Query: 435 SGFMEK--IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           SG++    + +  + V ++   +++     D  TFS +L+  AS A L RG  +HA+ ++
Sbjct: 661 SGYIYNGHLQEAMDCVCLMMHSEQMM----DHCTFSIVLNACASVAALERGMEMHAFGLR 716

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +   +DV+V +AL+ MY+KCG ID A ++F  +S ++  SWN+M+S YA HGLG+ AL +
Sbjct: 717 SHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEI 776

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           FEEM+  G +PD ++ + VL AC ++GL E G+  F E+ + YG+ P +EH++C++DLLG
Sbjct: 777 FEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYF-ELMEDYGILPRIEHYSCVIDLLG 835

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSV---SKLMANSKFSILASKRLLDLEPKDAGS 669
           RAG L +    +   P   + L+WRT++     SK  A       AS+ LL+LEP++  +
Sbjct: 836 RAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVN 895

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++L S  +A  G  ++ AK R  M    + KEAG SW+ +   +H F+A  + HP ++EI
Sbjct: 896 YVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEI 955

Query: 730 YSKLDLLNDEMK 741
           Y KL+ L  +++
Sbjct: 956 YEKLNFLIQKIR 967



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 251/515 (48%), Gaps = 22/515 (4%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           +++H  ++K G  +D F AN+L+N YAK  RLD A+++FDGM  R+A++WT LI G++  
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 138 GDYESVLGIACDMYRSEE--KFNEHTCSVILEACS-LLEDRI-FGEQIHAFAIKSGFENN 193
           G  E    +   M R     +    T   +L AC     DR+ F  Q+H    K+ F +N
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 194 VFVGTSLISMY--FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             V  +LISMY     G    A+ VF     +D+   N ++  Y K G++   F +F  +
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 252 LSSD----FEPNDYTFTNVISVCYE---NLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
              D      P ++TF ++I+  Y    +LG+ +  QL    +K G   ++ VG+A+V+ 
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCSLGLLD--QLFVRVLKSGCSSDLYVGSALVSA 322

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD-LGICCDSSC 363
           + +HGM +EA+ ++  + ERN ++   LI+G V+  HG  A   F+   D   +  D+  
Sbjct: 323 FARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYV 382

Query: 364 --LATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLD 420
             L+ + +  +    L  G ++H   ++ G++   + +   LV++YAK G +  A  +  
Sbjct: 383 VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQ 442

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               +    +N I++   +      E  M+ +   R   + P        LS  A    L
Sbjct: 443 LMEARDRISWNTIITALDQN--GYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLL 500

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ LH  ++K G   D  V NAL+ MY +CG +   ++IF  +S  D+VSWN+++   
Sbjct: 501 AAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVM 560

Query: 541 A-LHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           A        ++ +F  M + G  P+ ++ +  L A
Sbjct: 561 ASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAA 595



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 23/181 (12%)

Query: 480 LVRGR---------SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           L+RGR         SLH   +K G   D+ + N L+  YAK   +D A ++F G+  R+ 
Sbjct: 72  LLRGRRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNA 131

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFA--PDDISILGVLQACIYSGLSEGGICLF 588
           VSW  ++S + L GL + A  LF  M REG    P   +   VL+AC  SG    G  + 
Sbjct: 132 VSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAV- 190

Query: 589 NEIEQIYGLRPILEHFACMV---DLLGRAGRLSEAMNLINSSPFSESP----LLWRTLVS 641
               Q++GL    E  +       L+   G  S    ++    F  +P    + W  L+S
Sbjct: 191 ----QVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMS 246

Query: 642 V 642
           V
Sbjct: 247 V 247


>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g32430, mitochondrial; Flags: Precursor
 gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
 gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
 gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 207/682 (30%), Positives = 371/682 (54%), Gaps = 19/682 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDLK G  +H F   SG  +    +N ++ +Y K  R D A  +F+ ++    ++W +++
Sbjct: 90  GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL 149

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+ D+   +  L     M  +   F+  T S  L  C   E  + G Q+ +  +K+G E
Sbjct: 150 SGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLE 206

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVFVH 250
           +++ VG S I+MY  SG FR A  VF  +++KD+   N ++   ++ G     A  +F  
Sbjct: 207 SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRD 266

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++    E +  +FT+VI+ C     ++  +Q+HGL +K G    + VGN +++ Y K G+
Sbjct: 267 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 326

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E  + +F  +SERN++SWT +IS      +   A++ FL     G+  +      +I+ 
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINA 381

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
                 ++ GL++HG  IK G++S+  +G + + +YAK   L+ A+   +  + +    +
Sbjct: 382 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA--SQACLVRGRSLHA 488
           NA++SGF +     E   M L +    A   P+  TF  +L+  A      + +G+  HA
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAA---AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHA 498

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           + +K G  +  +V +AL+ MYAK G+ID + ++F  +S ++   W +++SAY+ HG  + 
Sbjct: 499 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 558

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
            + LF +M +E  APD ++ L VL AC   G+ + G  +FN + ++Y L P  EH++CMV
Sbjct: 559 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 618

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           D+LGRAGRL EA  L++  P      + ++++   +L  N K     ++  ++++P+ +G
Sbjct: 619 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 678

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI-DSK----LHHFVASGKDH 723
           S++ + N+YA +   D+AA++R  M    +SKEAG SWI++ D++    +  F +  K H
Sbjct: 679 SYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSH 738

Query: 724 PESEEIYSKLDLLNDEMKLKVK 745
           P+S+EIY  ++++  EM L+ K
Sbjct: 739 PKSDEIYRMVEIIGLEMNLEGK 760



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 295/595 (49%), Gaps = 31/595 (5%)

Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-------EKFNEHTCS 163
           +A KLFDG   R+A   T+ I   + +    +    A  +++            +E T  
Sbjct: 26  IAHKLFDGSSQRNA---TTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLC 82

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
           + L+AC    D   G QIH F+  SGF + V V  +++ MY  +G F  A  +F  L   
Sbjct: 83  LALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP 140

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV   N ++  ++   ++++A +  V + S+    + +T++  +S C  + G   G QL 
Sbjct: 141 DVVSWNTILSGFD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG-HG 342
              VK G+  ++ VGN+ +TMY + G    A R+FD +S +++ISW +L+SG  + G  G
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFG 257

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +A+  F + +  G+  D     +VI  C   ++L+L  Q+HG  IK GY S + +G  L
Sbjct: 258 FEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNIL 317

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +  Y+K G L++ + +    S +    +  +       I+ +++D + +F   R  G+ P
Sbjct: 318 MSRYSKCGVLEAVKSVFHQMSERNVVSWTTM-------ISSNKDDAVSIFLNMRFDGVYP 370

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           + VTF  L++       +  G  +H   IKTG+ ++  VGN+ IT+YAK  +++ A + F
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAF 430

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS---G 579
           + I+ R+I+SWNAM+S +A +G    AL +F     E   P++ +   VL A  ++    
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDIS 489

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           + +G  C  + ++      P++   + ++D+  + G + E+  + N     ++  +W ++
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSI 546

Query: 640 VSVSKLMANSKFSI-LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           +S      + +  + L  K + +    D  +F+ V      +GM+D+  ++   M
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 214/427 (50%), Gaps = 18/427 (4%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           +GS    LG  + + ++K+G ++D    N+ I +Y++      A+++FD M  +  I+W 
Sbjct: 185 VGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWN 244

Query: 129 SLIKGYLDDGD--YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           SL+ G   +G   +E+V+ I  DM R   + +  + + ++  C    D     QIH   I
Sbjct: 245 SLLSGLSQEGTFGFEAVV-IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI 303

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G+E+ + VG  L+S Y   G     ++VF  ++ ++V     MI     +   + A  
Sbjct: 304 KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVS 358

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F+++      PN+ TF  +I+    N  ++EG ++HGL +K G V E SVGN+ +T+Y 
Sbjct: 359 IFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYA 418

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K    E+A++ F+ I+ R +ISW A+ISG+ ++G   +A+  FL         +     +
Sbjct: 419 KFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGS 477

Query: 367 VIDGCSVCSNLEL--GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           V++  +   ++ +  G + H   +K G  S   + +AL+D+YAK G++  +  + +  S 
Sbjct: 478 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    + +I+S +      D E VM LF +     + PD VTF     LS   AC  +G 
Sbjct: 538 KNQFVWTSIISAYSSH--GDFETVMNLFHKMIKENVAPDLVTF-----LSVLTACNRKGM 590

Query: 485 SLHAYSI 491
               Y I
Sbjct: 591 VDKGYEI 597


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 204/689 (29%), Positives = 364/689 (52%), Gaps = 5/689 (0%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
            + +P L+K      D++ G  +H+ L+K G  +  F  N L+++YAK + L  A++LFD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241

Query: 118 GMLVR-SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           G   +  A+ W S++  Y   G     L +  +M+ +    N +T    L AC       
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301

Query: 177 FGEQIHAFAIKSGFENN-VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
            G++IHA  +KS   ++ ++V  +LI+MY   G   +AE + R +   DV   N +I  Y
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            +    + A   F  ++++  + ++ + T++I+       +  G +LH   +K G    +
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VGN ++ MY K  ++    R F  + +++LISWT +I+GY ++    +A+  F +    
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            +  D   L +++   SV  ++ +  ++H   ++ G L D  +   LVD+Y K  ++  A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYA 540

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             + +    K    + +++S     +  +E + + LF +    G+  D V    +LS +A
Sbjct: 541 TRVFESIKGKDVVSWTSMISS--SALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S + L +GR +H Y ++ G+  +  +  A++ MYA CG +  A  +F  I  + ++ + +
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++AY +HG GK A+ LF++M+ E  +PD IS L +L AC ++GL + G      +E  Y
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            L P  EH+ C+VD+LGRA  + EA   +       +  +W  L++  +  +  +   +A
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           ++RLL+LEPK+ G+ +LVSN++A QG  ++  KVR  M    + K  GCSWIE+D K+H 
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHK 838

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKLKV 744
           F A  K HPES+EIY KL  +  +++ +V
Sbjct: 839 FTARDKSHPESKEIYEKLSEVTRKLEREV 867



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 253/499 (50%), Gaps = 8/499 (1%)

Query: 77  GQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           G+ +H+ + K+  S    F A  L+ +Y K   LD A+K+FD M  R+A  W ++I  Y+
Sbjct: 99  GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            +G+  S L +  +M          +   +L+AC+ L D   G ++H+  +K G+ +  F
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           +  +L+SMY  +     A  +F G   K D    N ++  Y+ +G+S     +F  +  +
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHGMSEE 313
              PN YT  + ++ C      + GK++H   +K      E+ V NA++ MY + G   +
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           AER+   ++  ++++W +LI GYV++    +A+  F + +  G   D   + ++I     
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG-DLKSARMLLDGFSCKYTAEFNA 432
            SNL  G++LH + IKHG+ S++++G  L+D+Y+K        R  L     K    +  
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD-KDLISWTT 457

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++G+ +   D   + + LF       ME D +    +L  S+    ++  + +H + ++
Sbjct: 458 VIAGYAQN--DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G   D ++ N L+ +Y KC ++  A ++F+ I  +D+VSW +M+S+ AL+G    A+ L
Sbjct: 516 KGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574

Query: 553 FEEMKREGFAPDDISILGV 571
           F  M   G + D +++L +
Sbjct: 575 FRRMVETGLSADSVALLCI 593



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 162/315 (51%), Gaps = 5/315 (1%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAI 321
           F  V+ +C +   V +G+QLH    K     E+  +   +V MYGK G  ++AE++FD +
Sbjct: 83  FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
            +R   +W  +I  YV +G    A+  +      G+    S    ++  C+   ++  G 
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAILSGFMEK 440
           +LH   +K GY S   +  ALV +YAK  DL +AR L DGF  K  A  +N+ILS +   
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY--S 260

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAADV 499
            +    + + LF +  + G  P+  T    L+     +    G+ +HA  +K+  +++++
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            V NALI MY +CG +  A +I + +++ D+V+WN+++  Y  + + K AL  F +M   
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380

Query: 560 GFAPDDISILGVLQA 574
           G   D++S+  ++ A
Sbjct: 381 GHKSDEVSMTSIIAA 395



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 5/125 (4%)

Query: 455 QRLAGMEPD-PV-TFSRLLSLSASQACLVRGRSLHAYSIKT--GYAADVIVGNALITMYA 510
           QRL   E + PV  F+ +L L   +  + +GR LH+   KT   +  D + G  L+ MY 
Sbjct: 69  QRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYG 127

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCGS+D A ++F  + DR   +WN M+ AY  +G    AL L+  M+ EG      S   
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187

Query: 571 VLQAC 575
           +L+AC
Sbjct: 188 LLKAC 192


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 205/691 (29%), Positives = 365/691 (52%), Gaps = 5/691 (0%)

Query: 56  LLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKL 115
           L  + +P L+K      D++ G  +H+ L+K G  +  F  N L+++YAK + L  A++L
Sbjct: 143 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 202

Query: 116 FDGMLVR-SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED 174
           FDG   +  A+ W S++  Y   G     L +  +M+ +    N +T    L AC     
Sbjct: 203 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 262

Query: 175 RIFGEQIHAFAIKSGFENN-VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
              G++IHA  +KS   ++ ++V  +LI+MY   G   +AE + R +   DV   N +I 
Sbjct: 263 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 322

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
            Y +    + A   F  ++++  + ++ + T++I+       +  G +LH   +K G   
Sbjct: 323 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 382

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
            + VGN ++ MY K  ++    R F  + +++LISWT +I+GY ++    +A+  F +  
Sbjct: 383 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 442

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
              +  D   L +++   SV  ++ +  ++H   ++ G L D  +   LVD+Y K  ++ 
Sbjct: 443 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMG 501

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            A  + +    K    + +++S     +  +E + + LF +    G+  D V    +LS 
Sbjct: 502 YATRVFESIKGKDVVSWTSMISS--SALNGNESEAVELFRRMVETGLSADSVALLCILSA 559

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
           +AS + L +GR +H Y ++ G+  +  +  A++ MYA CG +  A  +F  I  + ++ +
Sbjct: 560 AASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 619

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            +M++AY +HG GK A+ LF++M+ E  +PD IS L +L AC ++GL + G      +E 
Sbjct: 620 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 679

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            Y L P  EH+ C+VD+LGRA  + EA   +       +  +W  L++  +  +  +   
Sbjct: 680 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 739

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
           +A++RLL+LEPK+ G+ +LVSN++A QG  ++  KVR  M    + K  GCSWIE+D K+
Sbjct: 740 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKV 799

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMKLKV 744
           H F A  K HPES+EIY KL  +  +++ +V
Sbjct: 800 HKFTARDKSHPESKEIYEKLSEVTRKLEREV 830



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 244/489 (49%), Gaps = 13/489 (2%)

Query: 92  DTFEANNLINLYAKF-----NRLDVAQ-KLFDGMLVRSAITWTSLIKGYLDDGDYESVLG 145
           D  E N+ +  +A        R  V+Q K+FD M  R+A  W ++I  Y+ +G+  S L 
Sbjct: 72  DVSENNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALA 131

Query: 146 IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYF 205
           +  +M          +   +L+AC+ L D   G ++H+  +K G+ +  F+  +L+SMY 
Sbjct: 132 LYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA 191

Query: 206 HSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
            +     A  +F G   K D    N ++  Y+ +G+S     +F  +  +   PN YT  
Sbjct: 192 KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 251

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
           + ++ C      + GK++H   +K      E+ V NA++ MY + G   +AER+   ++ 
Sbjct: 252 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 311

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
            ++++W +LI GYV++    +A+  F + +  G   D   + ++I      SNL  G++L
Sbjct: 312 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 371

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGG-DLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           H + IKHG+ S++++G  L+D+Y+K        R  L     K    +  +++G+ +   
Sbjct: 372 HAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD-KDLISWTTVIAGYAQN-- 428

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D   + + LF       ME D +    +L  S+    ++  + +H + ++ G   D ++ 
Sbjct: 429 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQ 487

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
           N L+ +Y KC ++  A ++F+ I  +D+VSW +M+S+ AL+G    A+ LF  M   G +
Sbjct: 488 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 547

Query: 563 PDDISILGV 571
            D +++L +
Sbjct: 548 ADSVALLCI 556



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 135/262 (51%), Gaps = 4/262 (1%)

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
           E++FD + +R   +W  +I  YV +G    A+  +      G+    S    ++  C+  
Sbjct: 99  EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 158

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAI 433
            ++  G +LH   +K GY S   +  ALV +YAK  DL +AR L DGF  K  A  +N+I
Sbjct: 159 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 218

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           LS +    +    + + LF +  + G  P+  T    L+     +    G+ +HA  +K+
Sbjct: 219 LSSY--STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276

Query: 494 G-YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
             +++++ V NALI MY +CG +  A +I + +++ D+V+WN+++  Y  + + K AL  
Sbjct: 277 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 336

Query: 553 FEEMKREGFAPDDISILGVLQA 574
           F +M   G   D++S+  ++ A
Sbjct: 337 FSDMIAAGHKSDEVSMTSIIAA 358


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 203/676 (30%), Positives = 357/676 (52%), Gaps = 11/676 (1%)

Query: 74  LKLGQAVHAFLLKSGSQN-------DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           L  G+ VH  L+ S S +       +T   N+LI +Y +    D A+++FD M  R+ ++
Sbjct: 60  LPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVS 119

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W S+I  ++ +G     LG+   M RS    ++      + AC+ L D   G Q+HA A+
Sbjct: 120 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 179

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           KS   +++ V  +L++MY  +G   +   +F  +  KD+     +I  + + G    A  
Sbjct: 180 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 239

Query: 247 VFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           VF  ++      PN++ F +    C      E G+Q+HGL++K+ + R++ VG ++  MY
Sbjct: 240 VFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 299

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            +    + A   F  I   +L+SW ++++ Y   G   +A+  F E  D G+  D   + 
Sbjct: 300 ARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 359

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            ++  C     L  G  +H + +K G   DV +  +L+ +YA+  DL SA  +      +
Sbjct: 360 GLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 419

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N+IL+   +   +  E+V+ LFS    +    D ++ + +LS SA        + 
Sbjct: 420 DVVTWNSILTACAQH--NHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQ 477

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHG 544
           +HAY+ K G   D ++ N LI  YAKCGS+D A ++F+ + ++RD+ SW++++  YA  G
Sbjct: 478 VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 537

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
             K A  LF  M+  G  P+ ++ +GVL AC   G    G   ++ +E  YG+ P  EH 
Sbjct: 538 YAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC 597

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
           +C+VDLL RAG+L+EA N I+  PF    ++W+TL++ SK+  + +    A++ +L+++P
Sbjct: 598 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 657

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
             + +++L+ N+YA  G  +E A+++  M    + K  G SW+++  +L  F+   + HP
Sbjct: 658 SHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHP 717

Query: 725 ESEEIYSKLDLLNDEM 740
           ESEEIY+ L+L+  EM
Sbjct: 718 ESEEIYAMLELIGMEM 733


>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
 gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
          Length = 688

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 206/682 (30%), Positives = 368/682 (53%), Gaps = 19/682 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDLK G  +H F   SG  +    +N ++ +Y K  R D A  +F+ ++    ++W +++
Sbjct: 15  GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL 74

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+ D+   +  L     M  +   F+  T S  L  C   E  + G Q+ +  +K+G E
Sbjct: 75  SGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLE 131

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVFVH 250
           +++ VG S I+MY  SG FR A  VF  +++KD+   N ++   ++ G     A  +F  
Sbjct: 132 SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRD 191

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++    E +  +FT+VI+ C     ++  +Q+HGL +K G    + VGN +++ Y K G+
Sbjct: 192 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 251

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E  + +F  +SERN++SWT +IS      +   A++ FL     G+  +      +I+ 
Sbjct: 252 LEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINA 306

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
                 ++ GL++HG  IK G++S+  +G + + +YAK   L+ A+   +  + +    +
Sbjct: 307 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 366

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA--SQACLVRGRSLHA 488
           NA++SGF +     E   M L +    A   P+  TF  +L+  A      + +G+  HA
Sbjct: 367 NAMISGFAQNGFSHEALKMFLSAA---AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHA 423

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           + +K G  +  +V +AL+ MYAK G+ID + ++F  +S ++   W +++SAY+ HG  + 
Sbjct: 424 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 483

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
            + LF +M +E  APD ++ L VL AC   G+ + G  +FN + ++Y L P  EH++CMV
Sbjct: 484 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 543

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           D+LGRAGRL EA  L++  P      + ++++   +L  N K     ++  ++++P+ +G
Sbjct: 544 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 603

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS-----KLHHFVASGKDH 723
           S++ + N+YA +   D+AA++R  M    +SKEAG SWI++        +  F +  K H
Sbjct: 604 SYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSH 663

Query: 724 PESEEIYSKLDLLNDEMKLKVK 745
           P+S+EIY  ++++  EM L+ K
Sbjct: 664 PKSDEIYRMVEIIGLEMNLEGK 685



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 214/427 (50%), Gaps = 18/427 (4%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           +GS    LG  + + ++K+G ++D    N+ I +Y++      A+++FD M  +  I+W 
Sbjct: 110 VGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWN 169

Query: 129 SLIKGYLDDGD--YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           SL+ G   +G   +E+V+ I  DM R   + +  + + ++  C    D     QIH   I
Sbjct: 170 SLLSGLSQEGTFGFEAVV-IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI 228

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G+E+ + VG  L+S Y   G     ++VF  ++ ++V     MI     +   + A  
Sbjct: 229 KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVS 283

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F+++      PN+ TF  +I+    N  ++EG ++HGL +K G V E SVGN+ +T+Y 
Sbjct: 284 IFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYA 343

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K    E+A++ F+ I+ R +ISW A+ISG+ ++G   +A+  FL         +     +
Sbjct: 344 KFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGS 402

Query: 367 VIDGCSVCSNLEL--GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           V++  +   ++ +  G + H   +K G  S   + +AL+D+YAK G++  +  + +  S 
Sbjct: 403 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 462

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    + +I+S +      D E VM LF +     + PD VTF     LS   AC  +G 
Sbjct: 463 KNQFVWTSIISAYSSH--GDFETVMNLFHKMIKENVAPDLVTF-----LSVLTACNRKGM 515

Query: 485 SLHAYSI 491
               Y I
Sbjct: 516 VDKGYEI 522



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 7/179 (3%)

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D VT    L+L A +  L RG  +H +S  +G+ + V V NA++ MY K G  D A  IF
Sbjct: 2   DEVTLC--LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 59

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           + + D D+VSWN +LS +  + +   AL     MK  G   D  +    L  C+ S    
Sbjct: 60  ENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 116

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            G+ L + + +  GL   L      + +  R+G    A  + +   F +  + W +L+S
Sbjct: 117 LGLQLQSTVVKT-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKD-MISWNSLLS 173


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 207/665 (31%), Positives = 358/665 (53%), Gaps = 12/665 (1%)

Query: 86   KSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLG 145
            KSG   D +  + L+N +A++  +D A+ +F  M  R+A+T   L+ G       E    
Sbjct: 379  KSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAK 438

Query: 146  IACDMYRSEEKFNEHTCSVIL----EACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGTSL 200
            +  +M +   + N  +  V+L    E  +L E +  G+++HA+  +SG  +  + +G +L
Sbjct: 439  VFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNAL 497

Query: 201  ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
            ++MY        A +VF+ +  KD    N MI   +     E A   F  +  +   P++
Sbjct: 498  VNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSN 557

Query: 261  YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
            ++  + +S C     +  G+Q+HG   K+G+  ++SV NA++T+Y +     E +++F  
Sbjct: 558  FSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQ 617

Query: 321  ISERNLISWTALISGYVR-SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            + E + +SW + I    +      +A+  FLE +  G   +      ++   S  S L L
Sbjct: 618  MPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGL 677

Query: 380  GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY-TAEFNAILSGFM 438
            G Q+H   +K+    D  +  AL+  Y K   ++   ++    S +     +N+++SG++
Sbjct: 678  GHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYL 737

Query: 439  EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
                  +   +V    QR  G + D  TF+ +LS  AS A L RG  +HA +++    +D
Sbjct: 738  HSGILHKAMDLVWPMMQR--GQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESD 795

Query: 499  VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
            V+VG+AL+ MYAKCG ID A + F+ +  R+I SWN+M+S YA HG G+ AL +F  MK+
Sbjct: 796  VVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQ 855

Query: 559  EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS 618
             G +PD ++ +GVL AC + GL + G   F  + ++YGL P +EHF+CMVDLLGRAG + 
Sbjct: 856  HGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVK 915

Query: 619  EAMNLINSSPFSESPLLWRTLVSVSKLM--ANSKFSILASKRLLDLEPKDAGSFILVSNM 676
            +  + I + P   + L+WRT++         N++    A+K L++LEP++A +++L+SNM
Sbjct: 916  KIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNM 975

Query: 677  YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
            +A  G  ++  + R  M    + K+AGCSW+ +   +H FVA  + HPE E+IY KL  L
Sbjct: 976  HAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKEL 1035

Query: 737  NDEMK 741
             ++++
Sbjct: 1036 MNKIR 1040



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 169/645 (26%), Positives = 305/645 (47%), Gaps = 26/645 (4%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN-RLDVAQKLFDGMLVRSAITWT 128
           GS  +KLG  +HAF+ K    +D   +N L+++Y+  +  +D A ++FD +  R+++TW 
Sbjct: 255 GSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWN 314

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKF----NEHT-CSVILEACSLLE-DRIFGEQIH 182
           S+I  Y   GD  S   +   M     +     NE+T CS++  ACSL +   +  EQ+ 
Sbjct: 315 SIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQML 374

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
               KSGF  +++VG++L++ +   G    A+ +F+ +  ++   +N +++   +  + E
Sbjct: 375 TRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGE 434

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYE--NL--GVEEGKQLHGLAVKFGVV-REISV 297
            A  VF   +    E N  +   ++S   E  NL  G  +G+++H    + G+V   IS+
Sbjct: 435 EAAKVFKE-MKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISI 493

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA+V MYGK    + A  +F  +  ++ +SW ++ISG   +    +A++ F      G+
Sbjct: 494 GNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGM 553

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
              +  + + +  CS    L LG Q+HG   K G   DV +  AL+ +YA+   +   + 
Sbjct: 554 VPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQK 613

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +           +N+ + G + K        +  F +   AG  P+ VTF  +L+  +S 
Sbjct: 614 VFFQMPEYDQVSWNSFI-GALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSF 672

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAM 536
           + L  G  +HA  +K   A D  + NAL+  Y KC  ++    IF  +S+ RD VSWN+M
Sbjct: 673 SVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSM 732

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S Y   G+   A+ L   M + G   D  +   VL AC      E G+    E+     
Sbjct: 733 ISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGM----EVHAC-A 787

Query: 597 LRPILEH----FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
           +R  LE      + +VD+  + G++  A       P   +   W +++S      + + +
Sbjct: 788 VRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPV-RNIYSWNSMISGYARHGHGQKA 846

Query: 653 ILASKRLLDL-EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
           +    R+    +  D  +F+ V +  +  G++DE  K   +M ++
Sbjct: 847 LKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEV 891



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 248/511 (48%), Gaps = 20/511 (3%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +H  L K+G  +D F  N LIN+Y +   L  A+KLFD M  ++ ++W+ LI GY  +  
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR--IFGEQIHAFAIKSGFENNVFVG 197
            +    +   +  S    N       L AC          G QIHAF  K    +++ + 
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 281

Query: 198 TSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL----L 252
             L+SMY   SG   +A  VF  + +++    N +I  Y + G++  AF +F  +    +
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341

Query: 253 SSDFEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
             +  PN+YT  ++++      + G+   +Q+     K G +R++ VG+A+V  + ++G+
Sbjct: 342 ELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            + A+ +F  + +RN ++   L+ G  R   G +A   F E  DL +  +S  L  ++  
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLST 460

Query: 371 CSVCSNLE----LGLQLHGFAIKHGYLSDVR--LGTALVDIYAKGGDLKSARMLLDGFSC 424
            +  SNL+     G ++H +  + G L D R  +G ALV++Y K   + +A  +      
Sbjct: 461 FTEFSNLKEGKRKGQEVHAYLFRSG-LVDARISIGNALVNMYGKCTAIDNACSVFQLMPS 519

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K T  +N+++SG      +  E+ +  F   +  GM P   +    LS  +S   L  GR
Sbjct: 520 KDTVSWNSMISGLDHN--ERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGR 577

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +H    K G   DV V NAL+T+YA+  SI+   ++F  + + D VSWN+ + A A + 
Sbjct: 578 QIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYE 637

Query: 545 LGK-GALLLFEEMKREGFAPDDISILGVLQA 574
                AL  F EM + G+ P+ ++ + +L A
Sbjct: 638 ASVLQALKYFLEMMQAGWRPNRVTFINILAA 668



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 158/348 (45%), Gaps = 9/348 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L LG+ +H    K G   D   +N L+ LYA+ + ++  QK+F  M     ++W S I
Sbjct: 571 GWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFI 630

Query: 132 KGYLDDGDYES----VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
                   YE+     L    +M ++  + N  T   IL A S       G QIHA  +K
Sbjct: 631 GAL---AKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILK 687

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFH 246
               ++  +  +L++ Y       + E +F  ++  +D    N MI  Y  +G    A  
Sbjct: 688 YSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMD 747

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +   ++    + + +TF  V+S C     +E G ++H  AV+  +  ++ VG+A+V MY 
Sbjct: 748 LVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYA 807

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  + A R F+ +  RN+ SW ++ISGY R GHG KA+  F      G   D      
Sbjct: 808 KCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVG 867

Query: 367 VIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
           V+  CS    ++ G +        +G    +   + +VD+  + GD+K
Sbjct: 868 VLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVK 915



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 165/339 (48%), Gaps = 27/339 (7%)

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL--------------GVEEGKQLHGLAV 287
           EMA H+F+ LL+     + YTF    +  +  L               + +   LH    
Sbjct: 110 EMASHLFMRLLNK--YNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSSSLYDANHLHLQLY 167

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           K G   ++   N ++ +Y + G    A ++FD + ++NL+SW+ LISGY ++    +A +
Sbjct: 168 KTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACS 227

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVC--SNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
            F   +  G+  +   + + +  C  C  + ++LG+Q+H F  K   +SD+ L   L+ +
Sbjct: 228 LFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSM 287

Query: 406 YAK-GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME--- 461
           Y+   G +  A  + D    + +  +N+I+S +  +   D      LFS  ++ G+E   
Sbjct: 288 YSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRR--GDAVSAFKLFSVMQMEGVELNL 345

Query: 462 -PDPVTFSRLLSLSASQA-C-LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
            P+  T   L++ + S A C LV    +     K+G+  D+ VG+AL+  +A+ G +D A
Sbjct: 346 RPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCA 405

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
             IFK + DR+ V+ N ++   A    G+ A  +F+EMK
Sbjct: 406 KMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK 444



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 7/171 (4%)

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           + + L     LH    KTG+  DV   N LI +Y + G++  A ++F  +  +++VSW+ 
Sbjct: 152 TSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSC 211

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ++S Y  + +   A  LF+ +   G  P+  ++   L+AC   G +  GI L  +I    
Sbjct: 212 LISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGST--GIKLGMQIHAFI 269

Query: 596 GLRPILEHFACMVDLLGR----AGRLSEAMNLINSSPFSESPLLWRTLVSV 642
              P +        L+      +G + +A  + +   F  S + W +++SV
Sbjct: 270 CKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNS-VTWNSIISV 319


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 205/678 (30%), Positives = 358/678 (52%), Gaps = 9/678 (1%)

Query: 74  LKLGQAVHAFLLKSGSQN----DTFEANNLINLYAKFNRLDVAQKLFDGM-LVRSAITWT 128
           L+ G+  H FL+++ S      D      L+ +Y K   L+ A+++FD M  V     WT
Sbjct: 107 LEGGKRAH-FLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWT 165

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           +L+ GY   GD    + +   M+    + + +T S +L+  + L     GE +H    K 
Sbjct: 166 ALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKL 225

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF +   VG +L++ Y  S   ++A  VF G+ ++DV   N MI      G  + A  +F
Sbjct: 226 GFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELF 285

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           V +     E +  T  +V+  C E   +  G+ +HG +VK G + + S+ N ++ MY   
Sbjct: 286 VRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNC 345

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
                  ++F  + ++N++SWTA+I+ Y R+G   K    F E    G   D   + + +
Sbjct: 346 SDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSAL 405

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
              +    L+ G  +HG+AI++G    + +  AL+++Y K G+++ A+++ DG   K   
Sbjct: 406 HAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMI 465

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N ++ G+      +E     LF++  L  + P+ VT + +L  +AS + L RGR +HA
Sbjct: 466 SWNTLIGGYSRNNLANE--AFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHA 522

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y+++ GY  D  V NALI MY KCG++  A ++F  +S+++++SW  M++ Y +HG G+ 
Sbjct: 523 YALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRD 582

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A+ LFE+M+  G APD  S   +L AC +SGL + G   F+ + + + + P L+H+ CMV
Sbjct: 583 AIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMV 642

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLL   G L EA   I+S P      +W +L+   ++  N K +   ++R+ +LEP++ G
Sbjct: 643 DLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTG 702

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            ++L++N+YA     +   K++  +    L +  GCSWIE   K+H F+A  ++HP+   
Sbjct: 703 YYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTR 762

Query: 729 IYSKLDLLNDEMKLKVKD 746
           I   L+ +   M+ +  D
Sbjct: 763 IAEFLNEVAKRMQEEGHD 780



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 212/408 (51%), Gaps = 3/408 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G G ++ G+ VH  L K G  +     N L+  YAK NR   A  +FDGM  R 
Sbjct: 202 VLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRD 261

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+W S+I G   +G Y+  + +   M+   E+ +  T   +L AC+ L     G  +H 
Sbjct: 262 VISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHG 321

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           +++K+GF +   +   L+ MY +   +R    +FR +  K+V     MI  Y +AG  + 
Sbjct: 322 YSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDK 381

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +F  +      P+ +  T+ +     N  ++ GK +HG A++ G+ + ++V NA++ 
Sbjct: 382 VAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALME 441

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  EEA+ +FD +  +++ISW  LI GY R+    +A + F E L L +  ++  
Sbjct: 442 MYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML-LQLRPNAVT 500

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           +  ++   +  S+LE G ++H +A++ GYL D  +  AL+D+Y K G L  AR L D  S
Sbjct: 501 MTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLS 560

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
            K    +  +++G+   +     D + LF Q R++G+ PD  +FS +L
Sbjct: 561 NKNLISWTIMVAGY--GMHGRGRDAIALFEQMRVSGIAPDAASFSAIL 606



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 216/448 (48%), Gaps = 26/448 (5%)

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
           VN  I    ++G+ E A    + LL SD   +D ++  V+ +C E   +E GK+ H L  
Sbjct: 64  VNLHIQRLCRSGDLEEA----LGLLGSD-GVDDRSYGAVLQLCSEVRSLEGGKRAHFLVR 118

Query: 288 KFGVVR---EISVGNAIVTMYGKHGMSEEAERMFDAISE-RNLISWTALISGYVRSGHGG 343
              + R   +  +G  +V MY K G  E A R+FD + +  ++  WTAL+SGY ++G   
Sbjct: 119 ASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLR 178

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
           + +  F +    G+  D+  ++ V+   +   ++E G  +HG   K G+ S   +G AL+
Sbjct: 179 EGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALM 238

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
             YAK    K A ++ DG   +    +N+++SG       D+   + LF +  L G E D
Sbjct: 239 AFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDK--AIELFVRMWLEGEELD 296

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
             T   +L   A    L  GR +H YS+KTG+ +   + N L+ MY+ C       +IF+
Sbjct: 297 SATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFR 356

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA-----CIYS 578
            +  +++VSW AM+++Y   GL      LF+EM  EG  PD  +I   L A      +  
Sbjct: 357 NMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKH 416

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           G S  G  + N +E++  +   L      +++  + G + EA  LI     S+  + W T
Sbjct: 417 GKSVHGYAIRNGMEKVLAVTNAL------MEMYVKCGNMEEA-KLIFDGVVSKDMISWNT 469

Query: 639 LVS--VSKLMANSKFSILASKRLLDLEP 664
           L+       +AN  FS+  ++ LL L P
Sbjct: 470 LIGGYSRNNLANEAFSLF-TEMLLQLRP 496


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 204/628 (32%), Positives = 327/628 (52%), Gaps = 41/628 (6%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS--GCFREAE 214
              H    +L  C   ++    +QIH+  IK+G  N  F  + LI     S  G    A 
Sbjct: 30  LQNHPSLTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYAL 86

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
            +F  +   +    N MI   + +     A   +V +L    EPN YTF  ++  C +  
Sbjct: 87  LLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVG 146

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG------------------------- 309
             +EGKQ+HG  +K G+  +  V  +++ MY ++G                         
Sbjct: 147 ATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALIT 206

Query: 310 ------MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
                   ++A R+F+ I  R+ +SW A+I+GY +SG   +A+  F E     +  + S 
Sbjct: 207 GYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNEST 266

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           + TV+  C+   +LELG  +  +   HG  S++RL  AL+D+Y+K GDL  AR L +G  
Sbjct: 267 MVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K    +N ++ G+     +  ++ + LF + + + +EP+ VTF  +L   A    L  G
Sbjct: 327 EKDIISWNVMIGGYSH--MNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384

Query: 484 RSLHAYSIKTGYA-ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           + +HAY  K      +  +  +LI MYAKCG+I+ A Q+F G+  + + SWNAM+S  A+
Sbjct: 385 KWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAM 444

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG    AL LF +M+ EGF PDDI+ +GVL AC ++GL E G   F+ + + Y + P L+
Sbjct: 445 HGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQ 504

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ CM+DLLGRAG   EA  L+ +        +W +L+   ++  N +    A+K L +L
Sbjct: 505 HYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFEL 564

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EP++ G+++L+SN+YA  G  D+ A++RT +ND  + K  GCS IE+DS +H F+   K 
Sbjct: 565 EPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKV 624

Query: 723 HPESEEIYSKLDLLND--EMKLKVKDSS 748
           H +S++IY  LD ++   E    V D+S
Sbjct: 625 HEQSQDIYKMLDEIDQLLEKAGHVPDTS 652



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 231/524 (44%), Gaps = 39/524 (7%)

Query: 57  LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYA--KFNRLDVAQK 114
           L  + P L  +S       L Q +H+ ++K+G  N  F  + LI   A   F  L  A  
Sbjct: 29  LLQNHPSLTLLSTCKSFQNLKQ-IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALL 87

Query: 115 LFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED 174
           LF+ +   +   W ++I+G          +     M     + N +T   +L++C+ +  
Sbjct: 88  LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147

Query: 175 RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS--------------------------- 207
              G+QIH   +K G E++ FV TSLI+MY  +                           
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207

Query: 208 ----GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
               GC  +A  +F  +  +D    N MI  Y ++G  E A   F  +  ++  PN+ T 
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
             V+S C ++  +E G  +       G+   + + NA++ MY K G  ++A  +F+ I E
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           +++ISW  +I GY       +A+  F +     +  +     +++  C+    L+LG  +
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387

Query: 384 HGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           H +  K    L++  L T+L+D+YAK G++++A+ +  G   K    +NA++SG    + 
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGL--AMH 445

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIV 501
                 + LF Q R  G EPD +TF  +LS  +    +  GR   +  ++    +  +  
Sbjct: 446 GHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQH 505

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHG 544
              +I +  + G  D A  + K +  + D   W ++L A  +HG
Sbjct: 506 YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 189/429 (44%), Gaps = 36/429 (8%)

Query: 30  NTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGS 89
           N+ S +P   + +   +        +  F   P L+K     G  + G+ +H  +LK G 
Sbjct: 107 NSLSSSPVGAIDFYVRMLLCGVEPNSYTF---PFLLKSCAKVGATQEGKQIHGHVLKLGL 163

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY-----LDD------- 137
           ++D F   +LIN+YA+   L  A+ +F    +R A+++T+LI GY     LDD       
Sbjct: 164 ESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEE 223

Query: 138 -------------------GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
                              G +E  L    +M R+    NE T   +L AC+       G
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             + ++    G  +N+ +  +LI MY   G   +A ++F G+  KD+   N MI  Y+  
Sbjct: 284 NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISV 297
              + A  +F  +  S+ EPND TF +++  C     ++ GK +H  +  KF  +   S+
Sbjct: 344 NSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             +++ MY K G  E A+++F  +  ++L SW A+ISG    GH   A+  F +  D G 
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGF 463

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSAR 416
             D      V+  CS    +ELG Q     ++   +S  ++    ++D+  + G    A 
Sbjct: 464 EPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAE 523

Query: 417 MLLDGFSCK 425
            L+     K
Sbjct: 524 ALMKNMEMK 532


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 235/729 (32%), Positives = 365/729 (50%), Gaps = 30/729 (4%)

Query: 26  KVPINTFSPNPKS---QVAYLCSISSVSCSERTLLFND------------WPQLVKISIG 70
           K+   TF  NP S    V   C + S  C E   L+N             +  +++   G
Sbjct: 53  KLVFETFQ-NPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAG 111

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
            G+L +G+ VH  ++K G   D     +L+ +Y     L  A+K+FD M  R  ++W+S+
Sbjct: 112 FGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSI 171

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  Y+D+G+    L +   +   + + +  T   I  AC  L      + +H   I+   
Sbjct: 172 ISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRI 231

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E    +  +L+ MY     F  AE +F  +  + +     MI  YN++   + A  VFV 
Sbjct: 232 ETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVE 291

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +L     PN  T   V+S C     + EGK +H  AVK   + + S+G A++  Y + G 
Sbjct: 292 MLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGK 351

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
               E++   I +RN+ISW  LIS Y   G   +A+  F++    G   DS  L++ I  
Sbjct: 352 LSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISA 411

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+    L LG Q+HG+AIK   L D  +  +L+D+Y+K G +  A ++ D    K    +
Sbjct: 412 CANVGLLWLGHQIHGYAIKRHIL-DEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAW 470

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC-----LVRGRS 485
           N+++ GF  +I +  E +  LF Q  L  ++ + VTF     L+A QAC     L +G+ 
Sbjct: 471 NSMICGF-SQIGNSLEAIR-LFDQMYLNCLDMNEVTF-----LTAIQACSHMGHLEKGKW 523

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           LH   I  G   D+ +  ALI MYAKCG +  A ++F  +S+R +VSW+AM+    +HG 
Sbjct: 524 LHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGD 583

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
              A+ LF EM +    P+DI+ + +L AC +SG  E G   FN ++  + + P LEHFA
Sbjct: 584 IDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKN-FEVEPNLEHFA 642

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           CMVDLL RAG L EA  +INS PF     +W  L++  ++           + LLD+   
Sbjct: 643 CMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTD 702

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           D G + L+SN+YA +G  D + KVR+ M  + L K  G S IE+D K++ F A    H +
Sbjct: 703 DTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGDVSHWQ 762

Query: 726 SEEIYSKLD 734
            +EI + L+
Sbjct: 763 VKEINTFLE 771



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 165/639 (25%), Positives = 302/639 (47%), Gaps = 19/639 (2%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +H+ LL +G  +D   +  LI  Y++   L  ++ +F+      +  W  LIK ++    
Sbjct: 20  LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNF 79

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
               + +   M   +   ++   S +L AC+   +   GE++H   IK G + +  V TS
Sbjct: 80  CGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETS 139

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ MY   GC   A+ VF  +  +D+   + +I  Y   GES     +F  L+S D E +
Sbjct: 140 LLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELD 199

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T  ++   C E   +   K +HG  ++  +     + +A+V MY +      AER+F 
Sbjct: 200 SVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFS 259

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            +  R++ SWTA+IS Y RS    +A+  F+E L+  +  ++  +  V+  C+  + L  
Sbjct: 260 NMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLRE 319

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G  +H +A+KH  L D  LG AL++ YA+ G L     +L     +    +N ++S +  
Sbjct: 320 GKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYAS 379

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
           +    E   + +F Q +  G  PD  + S  +S  A+   L  G  +H Y+IK  +  D 
Sbjct: 380 QGLFKE--ALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKR-HILDE 436

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            V N+LI MY+KCG +D A+ IF  I  + +V+WN+M+  ++  G    A+ LF++M   
Sbjct: 437 FVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLN 496

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
               ++++ L  +QAC + G  E G  L +++   YG++  L     ++D+  + G L  
Sbjct: 497 CLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIA-YGVKKDLFIDTALIDMYAKCGDLRI 555

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMA--NSKFSILASKRLLDLEPKDAGSFILVSNMY 677
           A  + +S     S + W  ++    +    ++  S+ A     +++P D  +F+ + +  
Sbjct: 556 AHRVFDSMS-ERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDI-TFMNILSAC 613

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           +  G ++E      +M +            E++  L HF
Sbjct: 614 SHSGYVEEGKFYFNSMKNF-----------EVEPNLEHF 641



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 96/202 (47%), Gaps = 2/202 (0%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           C++L     LH   +  G   D +  T L++ Y++ G L+S++++ + F    +  +  +
Sbjct: 11  CTSLRPLTLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVL 70

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +   +   ++   + + L+++     +      FS +L   A    L  G  +H   IK 
Sbjct: 71  IKCHV--WSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKY 128

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G   D +V  +L+ MY   G +  A ++F  ++ RD+VSW++++S Y  +G     L +F
Sbjct: 129 GLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMF 188

Query: 554 EEMKREGFAPDDISILGVLQAC 575
             +  +    D +++L +  AC
Sbjct: 189 RLLVSQDVELDSVTMLSIAGAC 210


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 190/587 (32%), Positives = 331/587 (56%), Gaps = 12/587 (2%)

Query: 160 HTCSV-----ILEACSLLEDRIFGEQIHAFAI---KSGFENNVFVGTSLISMYFHSGCFR 211
           H CS+     +L+  +  +   FG+ IHA  +   ++  ++++    SLI++Y   G  +
Sbjct: 19  HPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSK 78

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE-PNDYTFTNVISVC 270
            A  +F  +  ++V   + +++ Y   GE      +F +L+S D   PN+Y FT V+S C
Sbjct: 79  CARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCC 138

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
            ++  V+EGKQ HG  +K G++    V NA++ MY +    + A ++ D +   ++ S+ 
Sbjct: 139 ADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYN 198

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           +++S  V SG  G+A       +D  +  DS    +V+  C+   +L+LGLQ+H   +K 
Sbjct: 199 SILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKT 258

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G + DV + + L+D Y K G++ +AR   DG   +    + A+L+ +++      E+ + 
Sbjct: 259 GLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQN--GHFEETLN 316

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           LF++  L    P+  TF+ LL+  AS   L  G  LH   + +G+   +IVGNALI MY+
Sbjct: 317 LFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYS 376

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           K G+ID ++ +F  + +RD+++WNAM+  Y+ HGLGK ALL+F++M   G  P+ ++ +G
Sbjct: 377 KSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIG 436

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC++  L + G   F++I + + + P LEH+ CMV LLGRAG L EA N + ++   
Sbjct: 437 VLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQV 496

Query: 631 ESPLL-WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
           +  ++ WRTL++   +  N       ++ ++ ++P D G++ L+SNM+A     D   K+
Sbjct: 497 KWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKI 556

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           R  M +  + KE G SW++I +  H FV+ G +HPES +I+ K+  L
Sbjct: 557 RKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQL 603



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 250/500 (50%), Gaps = 24/500 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLL---KSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           L+K S  +  L+ G+ +HA L+   ++   +D  + N+LINLY+K  +   A+KLFD ML
Sbjct: 29  LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRML 88

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGE 179
            R+ ++W++L+ GYL  G+   VLG+  ++   +  + NE+  +++L  C+       G+
Sbjct: 89  QRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGK 148

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFR--EAENVFRGLAYKDVRCVNFMILEYNK 237
           Q H + +KSG   + +V  +LI MY  S CF    A  +   +   DV   N ++    +
Sbjct: 149 QCHGYLLKSGLLLHQYVKNALIHMY--SRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           +G    A  V   ++      +  T+ +V+ +C +   ++ G Q+H   +K G+V ++ V
Sbjct: 207 SGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFV 266

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            + ++  YGK G    A + FD + +RN+++WTA+++ Y+++GH  + +N F +      
Sbjct: 267 SSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDT 326

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +    A +++ C+    L  G  LHG  +  G+ + + +G AL+++Y+K G++ S+  
Sbjct: 327 RPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYN 386

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +      +    +NA++ G+       +   +++F     AG  P+ VTF  +LS     
Sbjct: 387 VFSNMMNRDVITWNAMICGYSHHGLGKQ--ALLVFQDMMSAGECPNYVTFIGVLSACVHL 444

Query: 478 ACLVRG-----RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD--RDI 530
           A +  G     + +  + ++ G          ++ +  + G +D A    K  +    D+
Sbjct: 445 ALVQEGFYYFDQIMKKFDVEPGLEH----YTCMVALLGRAGLLDEAENFMKTTTQVKWDV 500

Query: 531 VSWNAMLSAYALH---GLGK 547
           V+W  +L+A  +H    LGK
Sbjct: 501 VAWRTLLNACHIHRNYNLGK 520


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 203/678 (29%), Positives = 358/678 (52%), Gaps = 5/678 (0%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
            + +P L+K      D++ G  +H+ L+K G  +  F  N L+++YAK + L  A++LFD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241

Query: 118 GMLVR-SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           G   +  A+ W S++  Y   G     L +  +M+ +    N +T    L AC       
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301

Query: 177 FGEQIHAFAIKSGFENN-VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
            G++IHA  +KS   ++ ++V  +LI+MY   G   +AE + R +   DV   N +I  Y
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            +    + A   F  ++++  + ++ + T++I+       +  G +LH   +K G    +
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VGN ++ MY K  ++    R F  + +++LISWT +I+GY ++    +A+  F +    
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            +  D   L +++   SV  ++ +  ++H   ++ G L D  +   LVD+Y K  ++  A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYA 540

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             + +    K    + +++S     +  +E + + LF +    G+  D V    +LS +A
Sbjct: 541 TRVFESIKGKDVVSWTSMISS--SALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S + L +GR +H Y ++ G+  +  +  A++ MYA CG +  A  +F  I  + ++ + +
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++AY +HG GK A+ LF++M+ E  +PD IS L +L AC ++GL + G      +E  Y
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            L P  EH+ C+VD+LGRA  + EA   +       +  +W  L++  +  +  +   +A
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           ++RLL+LEPK+ G+ +LVSN++A QG  ++  KVR  M    + K  GCSWIE+D K+H 
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHK 838

Query: 716 FVASGKDHPESEEIYSKL 733
           F A  K HPES+EIY KL
Sbjct: 839 FTARDKSHPESKEIYEKL 856



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 253/499 (50%), Gaps = 8/499 (1%)

Query: 77  GQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           G+ +H+ + K+  S    F A  L+ +Y K   LD A+K+FD M  R+A  W ++I  Y+
Sbjct: 99  GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            +G+  S L +  +M          +   +L+AC+ L D   G ++H+  +K G+ +  F
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           +  +L+SMY  +     A  +F G   K D    N ++  Y+ +G+S     +F  +  +
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHGMSEE 313
              PN YT  + ++ C      + GK++H   +K      E+ V NA++ MY + G   +
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           AER+   ++  ++++W +LI GYV++    +A+  F + +  G   D   + ++I     
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG-DLKSARMLLDGFSCKYTAEFNA 432
            SNL  G++LH + IKHG+ S++++G  L+D+Y+K        R  L     K    +  
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD-KDLISWTT 457

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++G+ +   D   + + LF       ME D +    +L  S+    ++  + +H + ++
Sbjct: 458 VIAGYAQN--DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G   D ++ N L+ +Y KC ++  A ++F+ I  +D+VSW +M+S+ AL+G    A+ L
Sbjct: 516 KGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574

Query: 553 FEEMKREGFAPDDISILGV 571
           F  M   G + D +++L +
Sbjct: 575 FRRMVETGLSADSVALLCI 593



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 5/316 (1%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDA 320
            F  V+ +C +   V +G+QLH    K     E+  +   +V MYGK G  ++AE++FD 
Sbjct: 82  AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + +R   +W  +I  YV +G    A+  +      G+    S    ++  C+   ++  G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAILSGFME 439
            +LH   +K GY S   +  ALV +YAK  DL +AR L DGF  K  A  +N+ILS +  
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY-- 259

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAAD 498
             +    + + LF +  + G  P+  T    L+     +    G+ +HA  +K+  ++++
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           + V NALI MY +CG +  A +I + +++ D+V+WN+++  Y  + + K AL  F +M  
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379

Query: 559 EGFAPDDISILGVLQA 574
            G   D++S+  ++ A
Sbjct: 380 AGHKSDEVSMTSIIAA 395



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 5/125 (4%)

Query: 455 QRLAGMEPD-PV-TFSRLLSLSASQACLVRGRSLHAYSIKT--GYAADVIVGNALITMYA 510
           QRL   E + PV  F+ +L L   +  + +GR LH+   KT   +  D + G  L+ MY 
Sbjct: 69  QRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYG 127

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCGS+D A ++F  + DR   +WN M+ AY  +G    AL L+  M+ EG      S   
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187

Query: 571 VLQAC 575
           +L+AC
Sbjct: 188 LLKAC 192


>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
 gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
 gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 748

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 212/683 (31%), Positives = 353/683 (51%), Gaps = 10/683 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L + +  SG + LG+  H  ++KS      +  NNL+N+Y K   L  A++LFD M  R+
Sbjct: 53  LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I++ SLI GY   G YE  + +  +   +  K ++ T +  L  C    D   GE +H 
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             + +G    VF+   LI MY   G   +A ++F     +D    N +I  Y + G +E 
Sbjct: 173 LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLG---VEEGKQLHGLAVKFGVVREISVGNA 300
             ++   +         Y   +V+  C  NL    +E+G  +H    K G+  +I V  A
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA 292

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH-----GGKAINGFLEFLDL 355
           ++ MY K+G  +EA ++F  +  +N++++ A+ISG+++          +A   F++    
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+    S  + V+  CS    LE G Q+H    K+ + SD  +G+AL+++YA  G  +  
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDG 412

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
                  S +  A + +++   ++   +  E    LF Q   + + P+  T S ++S  A
Sbjct: 413 MQCFASTSKQDIASWTSMIDCHVQN--EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
             A L  G  +  Y+IK+G  A   V  + I+MYAK G++  A Q+F  + + D+ +++A
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M+S+ A HG    AL +FE MK  G  P+  + LGVL AC + GL   G+  F  ++  Y
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDY 590

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            + P  +HF C+VDLLGR GRLS+A NLI SS F + P+ WR L+S  ++  +S      
Sbjct: 591 RINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRV 650

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           ++RL++LEP+ +GS++L+ N+Y   G+   A +VR  M D  + KE   SWI I ++ H 
Sbjct: 651 AERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHS 710

Query: 716 FVASGKDHPESEEIYSKLDLLND 738
           F  +   HP S+ IY+ L+ +++
Sbjct: 711 FAVADLSHPSSQMIYTMLETMDN 733


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 196/623 (31%), Positives = 325/623 (52%), Gaps = 2/623 (0%)

Query: 115 LFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED 174
           +FD M  R+ +++ +LI GY     +     +   ++    + N    + +L+    +E 
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 175 RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
              G  +H   +K G+ +N F+GT+LI  Y  SGC   A  VF  ++ KD+     MI  
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
           Y +      A   F  +  + F+PN++TF  V+  C      + GK +H   +K    R+
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
           + VG  ++ +Y + G +++A R F  + + ++I W+ +IS + +SG   KA+  F +   
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             +  +    ++V+   +   +L+L   +HG A+K G  +DV +  AL+  YAK G ++ 
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           +  L +  S +    +N I+  +++    D E  + LFS      ++   VT+S +L   
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQ--LGDGERALSLFSNMLRYQVQATEVTYSSILRAC 359

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           A+ A L  G  +H  + KT Y  DV VGNALI MYAKCGSI  A  +F  +  RD VSWN
Sbjct: 360 ATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWN 419

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           A++  Y++HGLG  A+ +F  MK     PD+++ +GVL AC  +G  + G   F  ++Q 
Sbjct: 420 AIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQD 479

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           YG+ P +EH+ CMV L+GR+G L +A+  I   PF  S ++WR L+    +  + +   +
Sbjct: 480 YGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRI 539

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
           +++R+L+LEP+D  S +L+SN+YA        A VR  M    + KE G SWIE    +H
Sbjct: 540 SAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVH 599

Query: 715 HFVASGKDHPESEEIYSKLDLLN 737
            F  +   H + + I   L+ LN
Sbjct: 600 CFTVADTSHADLKLINGMLEFLN 622



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 251/473 (53%), Gaps = 8/473 (1%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           +LG+ VH  +LK G  ++TF    LI+ Y+    + +A+++FD +  +  ++WT +I  Y
Sbjct: 63  ELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASY 122

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
            ++  +   L     M  +  K N  T + +L+AC  L++   G+ +H   +K+ +E ++
Sbjct: 123 AENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDL 182

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           +VG  L+ +Y   G   +A   F  +   DV   +FMI  + ++G+SE A  +F  +  +
Sbjct: 183 YVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRA 242

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              PN +TF++V+    +   ++  K +HG A+K G+  ++ V NA++  Y K G  E++
Sbjct: 243 FVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQS 302

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
             +F+A+S+RN +SW  +I  YV+ G G +A++ F   L   +       ++++  C+  
Sbjct: 303 MELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATL 362

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           + LELGLQ+H    K  Y  DV +G AL+D+YAK G +K AR + D    +    +NAI+
Sbjct: 363 AALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAII 422

Query: 435 SGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
            G+ M  +     + + +F+  +    +PD +TF  +LS  ++   L  G+  +  S+K 
Sbjct: 423 CGYSMHGLG---VEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ-YFTSMKQ 478

Query: 494 GYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            Y  +  + +   ++ +  + G++D A +  + I  +  ++ W A+L A  +H
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIH 531


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 200/593 (33%), Positives = 318/593 (53%), Gaps = 13/593 (2%)

Query: 157 FNEHTCSVI--LEACSLLEDRIFGEQIHAFAIKS--GFENNVFVGTSLISMYFHSGCF-- 210
           FN H  S +  L+ C  ++     +QIHA  IK+    +  + + T L ++   S     
Sbjct: 18  FNPHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDP 74

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVFVHLLSSDFEPNDYTFTNVISV 269
           R A ++   L   ++   N +I     +    +    V+  +LS    P++YT   V+  
Sbjct: 75  RYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKA 134

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C E+  V EG+++HG A+K G+  ++ V N ++ MY    +   A ++FD   +R+L+SW
Sbjct: 135 CAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSW 194

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           T +I GYV+ G   + +  F E     +  D   L  V+  C+   +L LG +LH + I+
Sbjct: 195 TTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIR 254

Query: 390 HGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           +  ++ DV +G ALVD+Y K GD   AR +      K    +N+++SG  +K    +E +
Sbjct: 255 NSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQK-GQFKESL 313

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
            +    QRL G++PD VT   +L+  A+   L  G+ +HAY  +    AD  +GNAL+ M
Sbjct: 314 YMFRKMQRL-GVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDM 372

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           YAKCGSID A  +F+ ++ +D+ S+ AM+   A+HG G  AL LF EM + G  PD+++ 
Sbjct: 373 YAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTF 432

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
           +GVL AC + GL E G   F ++  IY LRP LEH+ CMVDLLGRAG ++EA   I + P
Sbjct: 433 VGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMP 492

Query: 629 FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAK 688
                 +   L+   K+    +      K++  +EP+  G+++L+SN+Y+      +A K
Sbjct: 493 IEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALK 552

Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +R TM +  L K  GCS IE+D  +H F    K HP+ +EIY  LD +   +K
Sbjct: 553 LRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 605



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 170/321 (52%), Gaps = 3/321 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K    S  ++ G+ VH   +K G  +D + +N L+ +YA  + +  A+K+FD    
Sbjct: 129 PFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQ 188

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  ++WT++I+GY+  G     +G+  +M     + +  T  ++L +C+ L D   G ++
Sbjct: 189 RDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKL 248

Query: 182 HAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           H + I++   N +VFVG +L+ MY   G    A  VF+ +  K+V   N MI    + G+
Sbjct: 249 HRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQ 308

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGN 299
            + + ++F  +     +P+D T   V++ C  NLGV E GK +H    +  +  +  +GN
Sbjct: 309 FKESLYMFRKMQRLGVKPDDVTLVAVLNSC-ANLGVLELGKWVHAYLDRNQIRADGFIGN 367

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+V MY K G  ++A  +F A++ +++ S+TA+I G    G GGKA++ F E   +GI  
Sbjct: 368 ALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEP 427

Query: 360 DSSCLATVIDGCSVCSNLELG 380
           D      V+  CS    +E G
Sbjct: 428 DEVTFVGVLTACSHVGLVEEG 448



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 127/246 (51%), Gaps = 2/246 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQN-DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           GDL+LG+ +H +++++ + N D F  N L+++Y K    + A+K+F  M V++ ++W S+
Sbjct: 240 GDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSM 299

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G    G ++  L +   M R   K ++ T   +L +C+ L     G+ +HA+  ++  
Sbjct: 300 ISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQI 359

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             + F+G +L+ MY   G   +A  VF+ +  KDV     MI+     G+   A  +F  
Sbjct: 360 RADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSE 419

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHG 309
           +     EP++ TF  V++ C     VEEG++    ++  + +  ++     +V + G+ G
Sbjct: 420 MPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAG 479

Query: 310 MSEEAE 315
           +  EAE
Sbjct: 480 LINEAE 485


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 189/667 (28%), Positives = 352/667 (52%), Gaps = 5/667 (0%)

Query: 78  QAVHAFL---LKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + +H F+   +K+G  ++      L++L+ KF  L  A ++F  +  +    + +++KGY
Sbjct: 91  KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY 150

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
             +   +  +   C M     +   +  + +L+ C    D   G++IH   I +GF +NV
Sbjct: 151 ARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNV 210

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           F  T +++MY       EA  +F  +  +D+ C N +I  Y + G  + A  + + +   
Sbjct: 211 FAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEE 270

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              P+  T  +++    +   +  G+ +HG +++ G    ++V  A+V MY K G    A
Sbjct: 271 GKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTA 330

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
             +FD ++ + ++SW ++I GYV++G  G A+  F + +D  +   +  +   +  C+  
Sbjct: 331 RLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADL 390

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
            ++E G  +H    +    SDV +  +L+ +Y+K   +  A  + +    K    +NA++
Sbjct: 391 GDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMI 450

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
            G+ +    +E   +  F + +L  ++PD  T   ++   A  + L + + +H   I+T 
Sbjct: 451 LGYAQNGRINE--AIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTC 508

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
              +V V  AL+ MYAKCG++  A ++F  + +R + +WNAM+  Y  HGLGK AL LFE
Sbjct: 509 LDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFE 568

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           +MK+E   P++++ L VL AC +SGL E G   F  +++ YGL P ++H+  MVDLLGRA
Sbjct: 569 KMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRA 628

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
            RL+EA + I   P   +  ++  ++   ++  N +    A+ R+ DL+P D G  +L++
Sbjct: 629 NRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLA 688

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           N+YA   M D+ A+VRTTM    + K  G S +E+ +++H F +    HP++++IY+ L+
Sbjct: 689 NIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLE 748

Query: 735 LLNDEMK 741
            L + +K
Sbjct: 749 TLGNRIK 755


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 194/595 (32%), Positives = 318/595 (53%), Gaps = 41/595 (6%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGC--FREAENVFRGLAYK--DVRCVNFMILE 234
           +QIH+  IKSG  N +F  + LI     S       A ++F  + ++  ++   N +I  
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV--- 291
           ++       + H+F  +L S   PN +TF ++   C ++    E KQLH  A+K  +   
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161

Query: 292 ----------------------------VREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
                                       +R+     A++T Y   G  ++A R+FD I  
Sbjct: 162 PHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           ++++SW A+I+GYV+SG   +A+  F    +  +  + S + +V+  C    +LELG  +
Sbjct: 222 KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWI 281

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
             +    G+  +++L  ALVD+Y+K G++ +AR L DG   K    +N ++ G+      
Sbjct: 282 GSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCH--LS 339

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK----TGYAADV 499
             E+ +VLF       + P+ VTF  +L   AS   L  G+ +HAY  K    TG   +V
Sbjct: 340 LYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNV 399

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            +  ++I MYAKCG ++ A Q+F+ +  R + SWNAM+S  A++G  + AL LFEEM  E
Sbjct: 400 SLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINE 459

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
           GF PDDI+ +GVL AC  +G  E G   F+ + + YG+ P L+H+ CM+DLL R+G+  E
Sbjct: 460 GFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDE 519

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
           A  L+ +        +W +L++  ++    +F    ++RL +LEP+++G+++L+SN+YAG
Sbjct: 520 AKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAG 579

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
            G  D+ AK+RT +ND  + K  GC+ IEID  +H F+   K HP+SE I+  LD
Sbjct: 580 AGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLD 634



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 6/351 (1%)

Query: 75  KLGQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++G+  HA L+   S   D      LI  Y     +D A++LFD +  +  ++W ++I G
Sbjct: 174 QVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAG 233

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+  G +E  L     M  ++   N+ T   +L AC  L     G+ I ++    GF  N
Sbjct: 234 YVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKN 293

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + +  +L+ MY   G    A  +F G+  KDV   N MI  Y      E A  +F  +L 
Sbjct: 294 LQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLR 353

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK----FGVVREISVGNAIVTMYGKHG 309
            +  PND TF  V+  C     ++ GK +H    K     G V  +S+  +I+ MY K G
Sbjct: 354 ENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCG 413

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E AE++F ++  R+L SW A+ISG   +GH  +A+  F E ++ G   D      V+ 
Sbjct: 414 CVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLS 473

Query: 370 GCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
            C+    +ELG +      K +G    ++    ++D+ A+ G    A++L+
Sbjct: 474 ACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLM 524



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 219/514 (42%), Gaps = 45/514 (8%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYA--KFNRLDVAQKLFDGMLVRSA--ITWT 128
           D+   + +H+ ++KSG  N  F  + LI   A      L  A  LF  +  +      W 
Sbjct: 37  DIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWN 96

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           +LI+ +       S L +   M  S    N HT   + ++C+  +     +Q+HA A+K 
Sbjct: 97  TLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKL 156

Query: 189 GFENNVFVGTSLISMYFHSGCFR-------------------------------EAENVF 217
               +  V TSLI MY   G  R                               +A  +F
Sbjct: 157 ALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLF 216

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +  KDV   N MI  Y ++G  E A   F  +  +D  PN  T  +V+S C     +E
Sbjct: 217 DEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLE 276

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
            GK +       G  + + + NA+V MY K G    A ++FD + ++++I W  +I GY 
Sbjct: 277 LGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYC 336

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH----GYL 393
                 +A+  F   L   +  +      V+  C+    L+LG  +H +  K+    G +
Sbjct: 337 HLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNV 396

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           ++V L T+++ +YAK G ++ A  +      +  A +NA++SG    +    E  + LF 
Sbjct: 397 NNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGL--AMNGHAERALGLFE 454

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVR--GRSLHAYSIKTGYAADVIVGNALITMYAK 511
           +    G +PD +TF  +LS + +QA  V    R   + +   G +  +     +I + A+
Sbjct: 455 EMINEGFQPDDITFVGVLS-ACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLAR 513

Query: 512 CGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
            G  D A  +   +  + D   W ++L+A  +HG
Sbjct: 514 SGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHG 547


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 205/674 (30%), Positives = 351/674 (52%), Gaps = 4/674 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K      D++ G  +H  L+K G  +  F  N L+++YAK + L  A++LFD   
Sbjct: 165 FPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQ 224

Query: 121 VR-SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            +  A+ W S++  Y   G     L +  +M  +    N +T    L AC        G+
Sbjct: 225 EKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGK 284

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IHA  +KS     V+V  +LI+MY   G   EA  + R +   DV   N +I  Y +  
Sbjct: 285 EIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNL 344

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             + A   F  ++++  +P++ + T+VI+       +  G +LH   +K G    + VGN
Sbjct: 345 MYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGN 404

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            ++ MY K  ++    R F  + E++LISWT +I+GY  +    +A+  F +     +  
Sbjct: 405 TLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEI 464

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   L +++  CSV  ++ +  ++H   ++ G L D  +   LVD+Y K  ++  A  + 
Sbjct: 465 DEMMLGSILRACSVLKSMLIVKEIHCHILRKG-LIDTVIQNELVDVYGKCRNMGYASRVF 523

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    K    + +++S     +  +E + + LF +    G+  D V    +LS +AS + 
Sbjct: 524 ESIKGKDVVSWTSMISS--SALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSA 581

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L +GR +H Y ++ G+  +  +  A++ MYA CG +  A  +F  I  + ++ + +M++A
Sbjct: 582 LKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINA 641

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y +HG GK ++ LF +M+ E  +PD IS L +L AC ++GL + G      +E  Y L P
Sbjct: 642 YGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEP 701

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             EH+ C+VD+LGRA  + EA   +       +  +W  L++  +  +  +   +A++RL
Sbjct: 702 WPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRL 761

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           L+LEPK+ G+ +LVSN++A QG  ++  KVR  M    + K  GCSWIE+D K+H F A 
Sbjct: 762 LELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTAR 821

Query: 720 GKDHPESEEIYSKL 733
            K HPE++EIY KL
Sbjct: 822 DKSHPETKEIYEKL 835



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 258/538 (47%), Gaps = 23/538 (4%)

Query: 51  CSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLK-SGSQNDTFEA------NNLINLY 103
           CS  T L +  P+L +I       K  Q     L    G  N+ F+       N+ I  Y
Sbjct: 41  CSIPTELSSCRPKLSRIQTNPSIGKPVQVPSPNLASFDGGLNEAFQRLDVNGNNSPIEAY 100

Query: 104 AKF------NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF 157
           A        +R    +K+FD M  R+A  W +LI  Y+ +G+  S L I  +M       
Sbjct: 101 AYLLELCGKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPL 160

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           + ++  V+L+AC  L D   G ++H   +K GF +  F+  +L+SMY  +     A+ +F
Sbjct: 161 DLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLF 220

Query: 218 RGLAYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
                K D    N ++  Y+ +G+S     +F  +  +    N YT  + ++ C      
Sbjct: 221 DASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYA 280

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
           + GK++H   +K     E+ V NA++ MY + G   EA R+   ++  ++++W +LI GY
Sbjct: 281 KLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGY 340

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           V++    +A+  F + +  G   D   L +VI      SNL  G++LH + IKHG+ S++
Sbjct: 341 VQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNL 400

Query: 397 RLGTALVDIYAKGG---DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
            +G  L+D+Y+K      +  A +++     K    +  I++G+   + D   + + LF 
Sbjct: 401 LVGNTLIDMYSKCNLTCYMGRAFLMMHE---KDLISWTTIIAGY--ALNDCHVEALQLFR 455

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
                 ME D +    +L   +    ++  + +H + ++ G   D ++ N L+ +Y KC 
Sbjct: 456 DVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCR 514

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           ++  A ++F+ I  +D+VSW +M+S+ AL+G    A+ LF  M   G   D +++L +
Sbjct: 515 NMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCI 572


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 209/673 (31%), Positives = 357/673 (53%), Gaps = 22/673 (3%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
            H   +K G   D +  NN+++ Y + +   L  A  LFD M  R  +TW ++I GY++ 
Sbjct: 21  THCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNS 80

Query: 138 GDYESVLGIACDMYRSEEKF----NEHTCSVILE--ACSLLEDRIFGEQIHAFAIKSGFE 191
           G     LG A ++Y+S + F    + +T   IL+  AC+   D   G+Q+H+  +K G+E
Sbjct: 81  GS----LGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLD--VGQQVHSLIVKMGYE 134

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +V+ G++L+ MY      R+A  VF+ +  ++    N +I  +   G+ + AF +   +
Sbjct: 135 EHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCM 194

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                  +D TF+ ++++  E    +   QLH   +K GV  + +V NA +T Y + G  
Sbjct: 195 EEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSL 254

Query: 312 EEAERMFD-AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
           E+AER+FD A+  R+L++W ++++ ++       A   FL+    G   D     T+I  
Sbjct: 255 EDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTII-- 312

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY--AKGGDLKSARMLLDGFSCKYTA 428
            S CS+ + G  LHG  IK G    V +  A++ +Y  +    ++ A  +      K   
Sbjct: 313 -SACSHKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRV 371

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N+IL+GF +      E+ + LF   R A ++ D   FS +L   +  A L  G+ +H 
Sbjct: 372 SWNSILTGFSQ--TGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHV 429

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            ++K+G+ ++  V ++LI MY+KCG I+ A + F+  +    ++WN+++ AYA HG G  
Sbjct: 430 LTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDV 489

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF +M+ +    D I+ +  L AC + GL E G  L   +   YG+ P +EH+AC V
Sbjct: 490 ALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAV 549

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DL GRAG L EA  LI S PF    ++W+TL+   +   + + +   +  LL+LEP++  
Sbjct: 550 DLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHC 609

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++++SNMY      DE A +   M + ++ K  G SWIE+ +++H F+A  + H   EE
Sbjct: 610 TYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEE 669

Query: 729 IYSKLDLLNDEMK 741
           IY  L+ L +++K
Sbjct: 670 IYQILEQLMEDIK 682



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 243/474 (51%), Gaps = 16/474 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L +GQ VH+ ++K G +   +  + L+++YAK  R+  A  +F  +  R++++W +LI G
Sbjct: 118 LDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAG 177

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE---QIHAFAIKSGF 190
           ++ +GD+++   +   M     + ++ T S +L   +LL+++ F +   Q+H   IK G 
Sbjct: 178 FVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLL---TLLDEKKFYKLTMQLHCKIIKHGV 234

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRG-LAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           + +  V  + I+ Y   G   +AE VF G +  +D+   N M+  +      E AF +F+
Sbjct: 235 QFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFL 294

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY--GK 307
            +    FEP+ YT+T +IS C      + GK LHGL +K G+ + + + NA++ MY    
Sbjct: 295 DMQQFGFEPDIYTYTTIISACSHK---DNGKSLHGLVIKRGLEQLVPICNAVIAMYLESS 351

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
               E+A  +F ++  ++ +SW ++++G+ ++GH   A+  F+      +  D    + V
Sbjct: 352 SNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAV 411

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  CS  + L+LG Q+H   +K G+ S+  + ++L+ +Y+K G ++ AR   +  +   +
Sbjct: 412 LRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSS 471

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-L 486
             +N+I+  + +    D    + LF Q R   ++ D +TF   L+  +    + +GR  L
Sbjct: 472 ITWNSIMFAYAQHGQGDV--ALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLL 529

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
            + +   G +  +      + ++ + G +D A  + + +  D D + W  +L A
Sbjct: 530 KSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGA 583



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 8/205 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LGQ +H   +KSG +++ F A++LI +Y+K   ++ A+K F+     S+ITW S++  
Sbjct: 421 LQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFA 480

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGF 190
           Y   G  +  LG+   M   + K +  T    L ACS   L+E   +   + + A   G 
Sbjct: 481 YAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRY--LLKSMASDYGI 538

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA-GESEMAFHVFV 249
              +      + ++  +G   EA+ +   + +     V   +L   +A G+ E+A  V  
Sbjct: 539 SPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVAS 598

Query: 250 HLLSSDFEPNDYTFTNVISVCYENL 274
           HLL  + EP ++    ++S  Y +L
Sbjct: 599 HLL--ELEPEEHCTYVILSNMYGHL 621


>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 702

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 204/638 (31%), Positives = 341/638 (53%), Gaps = 55/638 (8%)

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
           +++ +  T + +LE+C  L     G+Q+HA  +K+GF  + FV T L+ MY   GC  +A
Sbjct: 57  DKQIDSSTYASLLESCRTLN---LGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDA 113

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
             VF  +  +++     ++  +   G  E A  +F  L   D     + F  V+ +C   
Sbjct: 114 NLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGL 173

Query: 274 LGVEEGKQLHGLAVK--------------FGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             +E G+QLHG+ +K              F V   +S  N ++  Y ++G  E+A+ +FD
Sbjct: 174 RVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSY-NTMIVGYCENGNVEKAKELFD 232

Query: 320 AIS--ERNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSN 376
            +    ++ ISW ++ISGY  +    +A++ F + L + GI  DS  L +V+  C+  ++
Sbjct: 233 QMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMAS 292

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G ++H  A+  G   +  +G ALV++Y+K  DLK+A++  DG + + TA +N ++SG
Sbjct: 293 LRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISG 352

Query: 437 F------------MEKIADD---------------------EEDVMVLFSQQRLAGMEPD 463
           +            ++K+  D                      E  + LF++ + + + PD
Sbjct: 353 YACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPD 412

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
             T   +L   A  A + RG+ +HA+SI+ GY  DV +G AL+ MYAKCGSI  A Q++ 
Sbjct: 413 IYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYN 472

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            IS+ ++VS NAML+AYA+HG G   + LF  M   GF PD ++ L VL +C+++G  E 
Sbjct: 473 RISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVET 532

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
           G   F ++   Y + P L+H+ C+VDLL RAGRL EA  L+   P     ++W  L+   
Sbjct: 533 GHEFF-DLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGC 591

Query: 644 KLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAG 703
            +  N +   +A++ L++LEP + G+++L++N+YA  G   +  + R  + D  + K  G
Sbjct: 592 VIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPG 651

Query: 704 CSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           CSWIE    +H F++  K H ++E+IY+ LD LN  M+
Sbjct: 652 CSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNTHMR 689



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 243/576 (42%), Gaps = 60/576 (10%)

Query: 24  KKKVPINTFSPNPKSQVAYLCSI---SSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAV 80
           +K   ++  SPN   Q  +L +    + +S  ++ +  + +  L++       L LG+ V
Sbjct: 25  RKPTNLSFQSPNSTPQSMHLSTAAHHTHLSLLDKQIDSSTYASLLE---SCRTLNLGKQV 81

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           HA  LK+G     F    L+ +Y +F  LD A  +F  M  R+  +WT+++  ++D G +
Sbjct: 82  HAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYF 141

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK------------S 188
           E  L +   +   +         V+L+ C  L     G Q+H   IK            S
Sbjct: 142 EEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFS 201

Query: 189 GFE-NNVFVGTSLISMYFHSGCFREAENVFRG--LAYKDVRCVNFMILEYNKAGESEMAF 245
           GF   NV    ++I  Y  +G   +A+ +F    L  KD    N MI  Y      + A 
Sbjct: 202 GFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEAL 261

Query: 246 HVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            +F  LL  +  E + +T  +V++ C +   +  GK++H  AV  G+     VG A+V M
Sbjct: 262 SMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEM 321

Query: 305 YGKHGMSEEAERMFDAISER-----------------------------------NLISW 329
           Y K    + A+  FD ++ER                                   N+ +W
Sbjct: 322 YSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTW 381

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
             +ISG+V +GH   A+  F E     +  D   +  ++  C+  + +  G Q+H  +I+
Sbjct: 382 NGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIR 441

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            GY  DV +G ALVD+YAK G +K A  + +  S       NA+L+ +      DE   +
Sbjct: 442 QGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEG--I 499

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
            LF      G  PD VTF  +LS       +  G               +     ++ + 
Sbjct: 500 ALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLL 559

Query: 510 AKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHG 544
           ++ G +D A+++ K I  + D V W A+L    + G
Sbjct: 560 SRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWG 595


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 216/695 (31%), Positives = 360/695 (51%), Gaps = 7/695 (1%)

Query: 54  RTLLFNDWPQLVKISI--GSGDLKLGQA--VHAFLLKSGSQNDTFEANNLINLYAKFNRL 109
           R  LF   P    + I  G+ D  LG A  +H + ++     D F  + LI +Y    R 
Sbjct: 146 RMQLFGVRPDAYSLCILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRP 205

Query: 110 DVAQKLFDGMLVR-SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
             A +LF  +  + + + W  +I G+ ++G +E+ L +         K    + +  L A
Sbjct: 206 LDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSA 265

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C   E   FG Q+H   +K GFEN+ +V TSL++MY       +AENVF  ++ K     
Sbjct: 266 CCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELW 325

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N MI  Y   G S     ++  +      P+  T TNV+S C      + G+ +H   VK
Sbjct: 326 NAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVK 385

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
             +   +++ +A++TMY K G S++A  +F+ I  R++++W ++ISG+ ++    +A+  
Sbjct: 386 RPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEF 445

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           +      G   DS  +A+V+  C+   N+ LG  +HG AIK G   DV + ++LVD+Y+K
Sbjct: 446 YNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSK 505

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
               K +  +      K    +N+I+S +      D    + LFSQ    G+ PD V+ +
Sbjct: 506 FNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLS--ISLFSQMTQYGLFPDSVSIT 563

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L   +S A L +G+++H Y I+    +D+ + NALI MY KCG +  A  IF+ +   
Sbjct: 564 SVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQT 623

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           ++V+WN M++    HG    A+ LF+EM+  G APDDI+ + +L +C + G  E G+ LF
Sbjct: 624 NLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLF 683

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +   +G+ P +EH+  +VDLLGRAGRL +A   + + P      +W +L+   ++  N
Sbjct: 684 QLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHN 743

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            +   LA+ +LLD+EP    +++ + N+Y    + D AA +R +M +  L K  GCSWIE
Sbjct: 744 VELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWIE 803

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK 743
           + + +  F +     P + EIY  L+ L   M+ K
Sbjct: 804 VGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNMRKK 838



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 248/512 (48%), Gaps = 13/512 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           +P L+K      +L+ G+ +H+ ++  G   +D +   +LIN Y K      A K+FD  
Sbjct: 52  YPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFD-K 110

Query: 120 LVRSAIT------WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
           L  S ++      W S++ GY   G  +  +   C M     + + ++  ++L A     
Sbjct: 111 LPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASD--G 168

Query: 174 DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMI 232
              + +QIH ++++  F  + F+ + LI MYF  G   +A  +F+ L  K +V   N MI
Sbjct: 169 HLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMI 228

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             + + G  E +  V++   + + +    +FT+ +S C +   V  G Q+H   VK G  
Sbjct: 229 GGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFE 288

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            +  V  +++TMY K  + E+AE +FD +S +    W A+IS YV +G     +  + + 
Sbjct: 289 NDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQM 348

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
             L I  DS     V+  C +  + + G  +H   +K    S+V L +AL+ +Y+K G+ 
Sbjct: 349 KVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNS 408

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             A  + +    +    + +++SGF +       + +  ++   + G +PD    + ++S
Sbjct: 409 DDANSIFNTIKGRDVVAWGSMISGFCQN--RKYMEALEFYNSMTVYGEKPDSDIMASVVS 466

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
                  +  G ++H  +IK+G   DV V ++L+ MY+K      +  +F  +  +++V+
Sbjct: 467 ACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVA 526

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           WN+++S Y  +GL   ++ LF +M + G  PD
Sbjct: 527 WNSIISCYCRNGLPDLSISLFSQMTQYGLFPD 558



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 239/493 (48%), Gaps = 23/493 (4%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRG 219
           T   +L+AC  L +  +G+ IH+  I  GF  ++ ++ TSLI+ YF  G F  A  VF  
Sbjct: 51  TYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDK 110

Query: 220 L-----AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
           L     + +DV   N ++  Y + G  +     F  +      P+ Y+   ++     +L
Sbjct: 111 LPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASDGHL 170

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER-NLISWTALI 333
           G    KQ+HG +V+     +  + + ++ MY   G   +A R+F  + ++ N+++W  +I
Sbjct: 171 GY--AKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMI 228

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
            G+  +G    ++  +L   +  +   S+   + +  C     +  G+Q+H   +K G+ 
Sbjct: 229 GGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFE 288

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           +D  + T+L+ +Y+K   ++ A  + D  S K T  +NA++S ++        D + ++ 
Sbjct: 289 NDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGN--GRSYDGLKIYK 346

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVR----GRSLHAYSIKTGYAADVIVGNALITMY 509
           Q ++  + PD +T + +L    S  CLV     GR +HA  +K    ++V + +AL+TMY
Sbjct: 347 QMKVLQIPPDSLTATNVL----SSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMY 402

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           +KCG+ D A  IF  I  RD+V+W +M+S +  +     AL  +  M   G  PD   + 
Sbjct: 403 SKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMA 462

Query: 570 GVLQACIYSGLSEGGI-CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
            V+ AC  +GL    + C  + +    GL   +   + +VD+  +      + N+ +  P
Sbjct: 463 SVVSAC--TGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMP 520

Query: 629 FSESPLLWRTLVS 641
             ++ + W +++S
Sbjct: 521 L-KNLVAWNSIIS 532


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 218/685 (31%), Positives = 368/685 (53%), Gaps = 23/685 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GD KLG  +HAF + SG  +     N+L+N+Y K    D A  +F+ +     ++W +++
Sbjct: 92  GDSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVL 151

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+    D    L  A  M  +   F+  TC+ +L  CS  E  IFG Q+H+  +K G +
Sbjct: 152 SGFQRSDD---ALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLD 208

Query: 192 NNVFVGTSLISMYFHSGCFR--EAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVF 248
             VFVG +LI+MY  S C R  EA  VF  +  KD+   N M+  Y + G S + A  VF
Sbjct: 209 CEVFVGNALITMY--SRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVF 266

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           + +L    + +  +FT  IS C      E G+Q+H LAVK G    + V N +++ Y K 
Sbjct: 267 LEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKC 326

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              E+A+ +F++I +RN++SWT +IS          A + F E    G+  +      +I
Sbjct: 327 EDIEDAKLVFESIIDRNVVSWTTMISISEED-----ATSLFNEMRRDGVYPNDVTFVGLI 381

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
              ++ + +E G  +HG  +K  +LS++ +  +L+ +YAK   +  +  + +  + +   
Sbjct: 382 HAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREII 441

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS-LSASQACLVR-GRSL 486
            +N+++SG+ +     +E +    S   L    P+  TF  +LS +++++A  +R G+  
Sbjct: 442 SWNSLISGYAQN-GLWQEALQTFLSA--LMESRPNEFTFGSVLSSIASAEAISMRHGQRC 498

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H++ +K G   + IV +AL+ MYAK GSI  +  +F     ++ V+W A++SA+A HG  
Sbjct: 499 HSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDY 558

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           +  + LF++M+REG  PD I+ L V+ AC   G+ + G  LFN + + + + P  EH++ 
Sbjct: 559 EAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSS 618

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           MVD+LGRAGRL EA   +   P      + ++L+   ++  N   +   +  L+++EP  
Sbjct: 619 MVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMG 678

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK-----LHHFVASGK 721
           +GS++L+SN+YA +G  ++ AK+R  M +  + KE G SW+++        LH F +  K
Sbjct: 679 SGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGFSSDDK 738

Query: 722 DHPESEEIYSKLDLLNDEMKLKVKD 746
            HP+SEEIY   + L  EMK   K+
Sbjct: 739 FHPQSEEIYRMAETLGLEMKFLEKE 763



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 10/294 (3%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   +A V+  C  C + +LG Q+H FAI  G++S V +  +L+++Y K G    A ++ 
Sbjct: 79  DQVTVAIVLKAC--CGDSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVF 136

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +  +      +N +LSGF        +D +    +    G+  D VT + +L+  +    
Sbjct: 137 ENLNNPDIVSWNTVLSGFQRS-----DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEG 191

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
            + G  LH+  +K G   +V VGNALITMY++C  +  A ++F  + ++D+VSWNAMLS 
Sbjct: 192 FIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSG 251

Query: 540 YALHG-LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           YA  G  G  A+L+F EM +EG   D +S  G + AC +    E G  + +   +I G  
Sbjct: 252 YAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKI-GYD 310

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
             ++    ++    +   + +A  L+  S    + + W T++S+S+  A S F+
Sbjct: 311 THVKVCNVLISTYSKCEDIEDA-KLVFESIIDRNVVSWTTMISISEEDATSLFN 363


>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Vitis vinifera]
          Length = 629

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 188/595 (31%), Positives = 329/595 (55%), Gaps = 12/595 (2%)

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
           ++ +N  TC   L+A +  ++   G++IH++ + +GF N+    TSLI+MY        A
Sbjct: 32  QQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFA 91

Query: 214 ENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
            ++F    ++ +V   N +I  +   G  E  F  +  + +    P+ +TF   I  C  
Sbjct: 92  LSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC-- 149

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
            L V E K++HGL  KFG+  ++ +G+A+V  Y K G+ E A+  F+ +  R+++ W A+
Sbjct: 150 -LDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAM 208

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           ++GY + G     +  F    D  +      +  V+   +V  +L  G  +HGFA+K GY
Sbjct: 209 VNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGY 268

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
            S V +  +L+D+Y K   ++ A  + +    K    +N+I+S  + +   D +  + L 
Sbjct: 269 DSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS--VHEQCGDHDGTLRLL 326

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD------VIVGNALI 506
            +   AG++PD VT + +L   +  A L+ GR +H Y I +G   D      V++ NA+I
Sbjct: 327 DRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVI 386

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MYAKCGS+  A  +F+ +S++D+ SWN M+  Y +HG G  AL +F  M      PD++
Sbjct: 387 DMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEV 446

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + +GVL AC ++G    G     +++  Y + P +EH+ C++D+LGRAG+L EA  L  +
Sbjct: 447 TFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALT 506

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            P   +P++WR L++  +L  ++  + +A++R+ +LEP+  GS++L+SN+Y   G  +E 
Sbjct: 507 MPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEV 566

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            +VR TM    + K  GCSWIE+ + +H FV++ + HPE+  IY+ L+ L   ++
Sbjct: 567 LEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLR 621



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 239/482 (49%), Gaps = 18/482 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF-DGMLVRSAITWTSLI 131
           +L  G+ +H+++L +G  N      +LIN+Y+K N+++ A  +F D     +   + ++I
Sbjct: 52  NLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAII 111

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC-SLLEDRIFGEQIHAFAIKSGF 190
            G++ +G  E        M       ++ T    ++AC  +LE +    +IH    K G 
Sbjct: 112 SGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK----KIHGLLFKFGL 167

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E +VF+G++L++ Y   G    A+  F  L  +DV   N M+  Y + G+ EM    F  
Sbjct: 168 ELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRR 227

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +      P+ +T T V+SV      +  G+ +HG A+K G    ++V N+++ MYGK   
Sbjct: 228 MNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKC 287

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E+A  +F+ + E+++ SW +++S + + G     +      L  GI  D   + TV+  
Sbjct: 288 IEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPA 347

Query: 371 CSVCSNLELGLQLHGFAIKHGY------LSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           CS  + L  G ++HG+ I  G       + DV L  A++D+YAK G ++ A ++ +  S 
Sbjct: 348 CSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSN 407

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K  A +N ++ G+      +E   + +FS+     ++PD VTF  +LS  +    + +GR
Sbjct: 408 KDVASWNIMIMGYGMHGYGNE--ALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR 465

Query: 485 SLHAYSIKTGY--AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYA 541
           +     +K+ Y  A  +     +I M  + G +D A+++   +  + + V W A+L+A  
Sbjct: 466 NF-LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACR 524

Query: 542 LH 543
           LH
Sbjct: 525 LH 526



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 8/272 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL  G+ +H F +K G  +    +N+LI++Y K   ++ A ++F+ M  +   +W S++
Sbjct: 251 GDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIV 310

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             +   GD++  L +   M  +  + +  T + +L ACS L   + G +IH + I SG  
Sbjct: 311 SVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG 370

Query: 192 ------NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
                 ++V +  ++I MY   G  R+A  VF  ++ KDV   N MI+ Y   G    A 
Sbjct: 371 KDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEAL 430

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTM 304
            +F  +     +P++ TF  V+S C     V +G+  L  +  K+ V   I     ++ M
Sbjct: 431 EMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDM 490

Query: 305 YGKHGMSEEA-ERMFDAISERNLISWTALISG 335
            G+ G  +EA E       E N + W AL++ 
Sbjct: 491 LGRAGQLDEAYELALTMPIEANPVVWRALLAA 522


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 191/616 (31%), Positives = 324/616 (52%), Gaps = 2/616 (0%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R+ +++ +LI+GY+     + V+ +   ++R   + N    + IL+    +E       +
Sbjct: 4   RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSL 63

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA   K G E+N FVGT+LI  Y   G    A   F  +A KD+     M+  Y +    
Sbjct: 64  HACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRF 123

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + +  +F  +    F PN +TF  V+  C        GK +HG  +K     ++ VG  +
Sbjct: 124 QDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGL 183

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + +Y K G + +  R+F+ + + ++I W+ +IS Y +S    +A+  F +     +  + 
Sbjct: 184 LDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQ 243

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
              A+V+  C+   NL+LG Q+H   +K G   +V +  AL+D+YAK G L ++  L   
Sbjct: 244 FTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFME 303

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              +    +N ++ G+++  + D +  + L+       ++   VT+S +L   AS A + 
Sbjct: 304 LPNRNEVTWNTMIVGYVQ--SGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAME 361

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G  +H+ S+KT Y  DV+VGNALI MYAKCGSI  A  +F  +S+RD +SWNAM+S Y+
Sbjct: 362 LGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYS 421

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
           +HGL   AL  F+ M+     P+ ++ + +L AC  +GL + G   F  + Q YG+ P +
Sbjct: 422 MHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCM 481

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           EH+ CMV LLGR+G L +A+ LI   P   +  +WR L+    +  +    I++++++L 
Sbjct: 482 EHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQ 541

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           ++P+D  + +L+SN+YA     +  A VR  M +  + KE G SWIE    +H+F     
Sbjct: 542 IDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDT 601

Query: 722 DHPESEEIYSKLDLLN 737
            HP+ + I   L+ LN
Sbjct: 602 SHPDMKMISGMLEWLN 617



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 247/473 (52%), Gaps = 8/473 (1%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           +L  ++HA + K G +++ F    LI+ YA    ++ A++ FD +  +  ++WT ++  Y
Sbjct: 58  ELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACY 117

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
            ++  ++  L +  +M       N  T + +L+AC  LE    G+ +H   +K+ +E ++
Sbjct: 118 AENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDL 177

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           +VG  L+ +Y   G   +   VF  +   DV   +FMI  Y ++ +S  A  +F  +  +
Sbjct: 178 YVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRA 237

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              PN +TF +V+  C     ++ GKQ+H   +K G+   + V NA++ +Y K G  + +
Sbjct: 238 FVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNS 297

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            ++F  +  RN ++W  +I GYV+SG G KA++ +   L+  +       ++V+  C+  
Sbjct: 298 MKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASL 357

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           + +ELG Q+H  ++K  Y  DV +G AL+D+YAK G +K+AR++ D  S +    +NA++
Sbjct: 358 AAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMI 417

Query: 435 SGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           SG+ M  +     + +  F   +     P+ +TF  +LS  ++   L  G++ +  S+  
Sbjct: 418 SGYSMHGLVG---EALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQN-YFKSMVQ 473

Query: 494 GYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            Y  +  + +   ++ +  + G +D A ++ + I  + ++  W A+L A  +H
Sbjct: 474 DYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIH 526



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 4/320 (1%)

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + +RN +S+  LI GYV+S    + ++ F      G   +     T++         EL 
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
             LH    K G+ S+  +GTAL+D YA  G + SAR   D  +CK    +  +++ + E 
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
             D  +D + LF++ R+ G  P+  TF+ +L           G+S+H   +KT Y  D+ 
Sbjct: 121 --DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           VG  L+ +Y K G  +   ++F+ +   D++ W+ M+S YA     + A+ LF +M+R  
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF 238

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             P+  +   VLQ+C      + G  +   + ++ GL   +     ++D+  + GRL  +
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKV-GLDGNVFVSNALMDVYAKCGRLDNS 297

Query: 621 MNLINSSPFSESPLLWRTLV 640
           M L    P + + + W T++
Sbjct: 298 MKLFMELP-NRNEVTWNTMI 316


>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 188/595 (31%), Positives = 329/595 (55%), Gaps = 12/595 (2%)

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
           ++ +N  TC   L+A +  ++   G++IH++ + +GF N+    TSLI+MY        A
Sbjct: 32  QQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFA 91

Query: 214 ENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
            ++F    ++ +V   N +I  +   G  E  F  +  + +    P+ +TF   I  C  
Sbjct: 92  LSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC-- 149

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
            L V E K++HGL  KFG+  ++ +G+A+V  Y K G+ E A+  F+ +  R+++ W A+
Sbjct: 150 -LDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAM 208

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           ++GY + G     +  F    D  +      +  V+   +V  +L  G  +HGFA+K GY
Sbjct: 209 VNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGY 268

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
            S V +  +L+D+Y K   ++ A  + +    K    +N+I+S  + +   D +  + L 
Sbjct: 269 DSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS--VHEQCGDHDGTLRLL 326

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD------VIVGNALI 506
            +   AG++PD VT + +L   +  A L+ GR +H Y I +G   D      V++ NA+I
Sbjct: 327 DRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVI 386

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MYAKCGS+  A  +F+ +S++D+ SWN M+  Y +HG G  AL +F  M      PD++
Sbjct: 387 DMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEV 446

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + +GVL AC ++G    G     +++  Y + P +EH+ C++D+LGRAG+L EA  L  +
Sbjct: 447 TFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALT 506

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            P   +P++WR L++  +L  ++  + +A++R+ +LEP+  GS++L+SN+Y   G  +E 
Sbjct: 507 MPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEV 566

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            +VR TM    + K  GCSWIE+ + +H FV++ + HPE+  IY+ L+ L   ++
Sbjct: 567 LEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLR 621



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 238/481 (49%), Gaps = 16/481 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF-DGMLVRSAITWTSLI 131
           +L  G+ +H+++L +G  N      +LIN+Y+K N+++ A  +F D     +   + ++I
Sbjct: 52  NLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAII 111

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G++ +G  E        M       ++ T    ++AC    D +  ++IH    K G E
Sbjct: 112 SGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLFKFGLE 168

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VF+G++L++ Y   G    A+  F  L  +DV   N M+  Y + G+ EM    F  +
Sbjct: 169 LDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRM 228

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P+ +T T V+SV      +  G+ +HG A+K G    ++V N+++ MYGK    
Sbjct: 229 NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCI 288

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+A  +F+ + E+++ SW +++S + + G     +      L  GI  D   + TV+  C
Sbjct: 289 EDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPAC 348

Query: 372 SVCSNLELGLQLHGFAIKHGY------LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           S  + L  G ++HG+ I  G       + DV L  A++D+YAK G ++ A ++ +  S K
Sbjct: 349 SHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK 408

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
             A +N ++ G+      +E   + +FS+     ++PD VTF  +LS  +    + +GR+
Sbjct: 409 DVASWNIMIMGYGMHGYGNE--ALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRN 466

Query: 486 LHAYSIKTGY--AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
                +K+ Y  A  +     +I M  + G +D A+++   +  + + V W A+L+A  L
Sbjct: 467 F-LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRL 525

Query: 543 H 543
           H
Sbjct: 526 H 526



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 8/272 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL  G+ +H F +K G  +    +N+LI++Y K   ++ A ++F+ M  +   +W S++
Sbjct: 251 GDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIV 310

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             +   GD++  L +   M  +  + +  T + +L ACS L   + G +IH + I SG  
Sbjct: 311 SVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG 370

Query: 192 ------NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
                 ++V +  ++I MY   G  R+A  VF  ++ KDV   N MI+ Y   G    A 
Sbjct: 371 KDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEAL 430

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTM 304
            +F  +     +P++ TF  V+S C     V +G+  L  +  K+ V   I     ++ M
Sbjct: 431 EMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDM 490

Query: 305 YGKHGMSEEA-ERMFDAISERNLISWTALISG 335
            G+ G  +EA E       E N + W AL++ 
Sbjct: 491 LGRAGQLDEAYELALTMPIEANPVVWRALLAA 522


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 183/588 (31%), Positives = 328/588 (55%), Gaps = 13/588 (2%)

Query: 165 ILEACSLLEDRIFGEQ--IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           +L+ C  L+ R + E   +H   +K+G  +N FV + L+++Y   G   +A  VF  +  
Sbjct: 73  LLQQC--LDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLR 130

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           ++V     +++ + +  + + A HVF  +L +   P+ YT + V+  C     ++ G Q 
Sbjct: 131 RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQF 190

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H   +K+ V  + SVG+A+ ++Y K G  E+A + F  I E+N+ISWT+ +S    +G  
Sbjct: 191 HAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAP 250

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            K +  F+E + + I  +   L + +  C    +LELG Q++   IK GY S++R+  +L
Sbjct: 251 VKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSL 310

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG---FMEKIADD------EEDVMVLFS 453
           + +Y K G +  A  L +         +NA+++G    ME   D+        + + LFS
Sbjct: 311 LYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFS 370

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           +  L+GM+PD  T S +LS+ +    + +G  +HA +IKTG+ +DVIV  +LI+MY+KCG
Sbjct: 371 KLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCG 430

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           SI+ A + F  +S R +++W +M++ ++ HG+ + AL +FE+M   G  P+ ++ +GVL 
Sbjct: 431 SIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLS 490

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC ++G+    +  F  +++ Y ++P ++H+ CMVD+  R GRL +A+N I    +  S 
Sbjct: 491 ACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSE 550

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
            +W   ++  K   N +    A+++LL L+PKD  +++L+ NMY      ++ ++VR  M
Sbjct: 551 FIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMM 610

Query: 694 NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            + ++ K    SWI I  K++ F  +GK HP+S  I   L+ L  ++K
Sbjct: 611 EEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVK 658



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 250/482 (51%), Gaps = 19/482 (3%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           Q VH  ++K+G  ++ F  + L+N+YAK   ++ A+++FD ML R+ + WT+L+ G++ +
Sbjct: 87  QIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQN 146

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
              +  + +  +M  +    + +T S +L ACS L+    G+Q HA+ IK   + +  VG
Sbjct: 147 SQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVG 206

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           ++L S+Y   G   +A   F  +  K+V      +      G       +FV +++ D +
Sbjct: 207 SALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIK 266

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           PN++T T+ +S C E L +E G Q++ L +KFG    + V N+++ +Y K G   EA R+
Sbjct: 267 PNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRL 326

Query: 318 FDAISERNLISWTALISGYVR-----------SGHGGKAINGFLEFLDLGICCDSSCLAT 366
           F+ + + ++++W A+I+G+ +              G +A+  F +    G+  D   L++
Sbjct: 327 FNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSS 386

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+  CS    +E G Q+H   IK G+LSDV + T+L+ +Y+K G ++ A       S + 
Sbjct: 387 VLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRT 446

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              + ++++GF +      +  + +F    LAG+ P+ VTF  +LS + S A +V  ++L
Sbjct: 447 MIAWTSMITGFSQH--GMSQQALHIFEDMSLAGVRPNAVTFVGVLS-ACSHAGMV-SQAL 502

Query: 487 HAYSI-KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
           + + I +  Y     + +   ++ M+ + G ++ A    K ++ +     W+  ++    
Sbjct: 503 NYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKS 562

Query: 543 HG 544
           HG
Sbjct: 563 HG 564



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 205/423 (48%), Gaps = 30/423 (7%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LKLG   HA+++K     D    + L +LY+K  RL+ A K F  +  ++ I+WTS +  
Sbjct: 184 LKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSA 243

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
             D+G     L +  +M   + K NE T +  L  C  +     G Q+++  IK G+E+N
Sbjct: 244 CADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESN 303

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM---------- 243
           + V  SL+ +Y  SGC  EA  +F  +    +   N MI     AG ++M          
Sbjct: 304 LRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMI-----AGHAQMMELTKDNLSA 358

Query: 244 ------AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
                 A  +F  L  S  +P+ +T ++V+SVC   L +E+G+Q+H   +K G + ++ V
Sbjct: 359 CHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIV 418

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             ++++MY K G  E A + F  +S R +I+WT++I+G+ + G   +A++ F +    G+
Sbjct: 419 STSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGV 478

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAI---KHGYLSDVRLGTALVDIYAKGGDLKS 414
             ++     V+  CS    +   L    F I   K+     +     +VD++ + G L+ 
Sbjct: 479 RPNAVTFVGVLSACSHAGMVSQALNY--FEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQ 536

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP-DPVTFSRLLSL 473
           A   +   + +  +EF  I S F+          +  ++ ++L  ++P DP T+  LL++
Sbjct: 537 ALNFIKKMNYE-PSEF--IWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNM 593

Query: 474 SAS 476
             S
Sbjct: 594 YLS 596



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 158/326 (48%), Gaps = 17/326 (5%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  ++  C +     E + +HG  +K G      V + +V +Y K G  E+A R+FD + 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
            RN+++WT L+ G+V++     AI+ F E L  G       L+ V+  CS   +L+LG Q
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
            H + IK+    D  +G+AL  +Y+K G L+ A         K    + + +S      A
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSA----CA 245

Query: 443 DDEEDV--MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
           D+   V  + LF +     ++P+  T +  LS       L  G  +++  IK GY +++ 
Sbjct: 246 DNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLR 305

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA---------LHGLGKG--A 549
           V N+L+ +Y K G I  A ++F  + D  +V+WNAM++ +A         L    +G  A
Sbjct: 306 VRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEA 365

Query: 550 LLLFEEMKREGFAPDDISILGVLQAC 575
           L LF ++   G  PD  ++  VL  C
Sbjct: 366 LKLFSKLNLSGMKPDLFTLSSVLSVC 391


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 195/654 (29%), Positives = 341/654 (52%), Gaps = 3/654 (0%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM- 150
           D  EANN + +  K N L  A+ LFD +  R  ++WT++I GY++  D    L +   M 
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
            +SE + +    S+ L+ C L  + ++G  +H F++K+G  N+VFVG++L+ MY   G  
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
             +  VF  +  ++      +I    +AG SE     F  +  S  E + Y +   +   
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
            ++  +  G+ +H   +K G      V N++ TMY K G  +     F  +   +++SWT
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
            +++ Y++ G     +  F       +  +    + VI  C+  + L+ G QLH   +  
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCV 347

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G+++ + +  +++ +Y+K G+L S   +      +    ++ I++ +  ++   EE    
Sbjct: 348 GFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAY-SQVGYGEEAFEY 406

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           L S+ R  G +P+    + +LS+  S A L +G+ LHA+ +  G     +V +ALI MYA
Sbjct: 407 L-SRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYA 465

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCGSI  A +IF      DI+SW AM+S YA HG  + A+ LFE +++ G  PD ++ +G
Sbjct: 466 KCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIG 525

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC ++G+ + G   FN + + Y + P  EH+ CM+DLL RAGRL +A  LI S P  
Sbjct: 526 VLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQ 585

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
              ++W TL+   ++  +      A+  +L L+P  AG+ I ++N++A +G   EAA +R
Sbjct: 586 WDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIR 645

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKV 744
             M    + KE G S +++   +  FV+  + HP+ E+IY+ L+ L   M++ +
Sbjct: 646 MLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGMEIYI 699



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 233/479 (48%), Gaps = 22/479 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +H F +K+G  N  F  + L+++Y K   +  + K+FD M  R+A+TWT++I G + 
Sbjct: 135 GTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVR 194

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G  E+ L     M RS+ +++ +  ++ L+A +       G  IH   +K GF+ N FV
Sbjct: 195 AGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFV 254

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL +MY   G      + FR +   DV     ++  Y + G+ +     F  + +S+ 
Sbjct: 255 ANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNV 314

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN+YTF+ VIS C     ++ G+QLH   +  G V  +SV N+I+T+Y K G      +
Sbjct: 315 IPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F ++  R++I+W+ +I+ Y + G+G +A          G   +   LA+V+  C   + 
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA-RMLLDGFSCKYTAEFNAILS 435
           LE G QLH   +  G      + +AL+ +YAK G +  A ++ +D +     + + A++S
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIIS-WTAMIS 493

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV---------RGRSL 486
           G+ E      ++ + LF   +  G+ PD VTF  +L+ + S A +V           +  
Sbjct: 494 GYAEH--GHSQEAIELFENIQKVGLRPDSVTFIGVLT-ACSHAGMVDLGFYYFNSMSKDY 550

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHG 544
           H    K  Y         +I +  + G +  A  + + +  + D V W+ +L A  +HG
Sbjct: 551 HITPSKEHYG-------CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 177/363 (48%), Gaps = 1/363 (0%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K S  SG L  G+++H   LK G   ++F AN+L  +Y K  +LD     F  M     
Sbjct: 224 LKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDV 283

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WT+++  Y+  G  +  L     M  S    NE+T S ++  C+      +GEQ+HA 
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAH 343

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +  GF N + V  S++++Y   G       VF  + ++D+   + +I  Y++ G  E A
Sbjct: 344 VLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEA 403

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F     + S   +PN++   +V+SVC     +E+GKQLH   +  G+ +   V +A++ M
Sbjct: 404 FEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIM 463

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G   EA ++F    + ++ISWTA+ISGY   GH  +AI  F     +G+  DS   
Sbjct: 464 YAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYAKGGDLKSARMLLDGFS 423
             V+  CS    ++LG        K  +++  +     ++D+  + G L  A  L+    
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583

Query: 424 CKY 426
            ++
Sbjct: 584 IQW 586


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 204/698 (29%), Positives = 355/698 (50%), Gaps = 9/698 (1%)

Query: 56   LLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKL 115
            L  N +  ++++      L+ G+ VH+ ++ +G   D      L+ +Y     L   +K+
Sbjct: 367  LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKI 426

Query: 116  FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
            FD ++      W  L+  Y   G++   + +   M +     N +T + +L+  + L   
Sbjct: 427  FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKV 486

Query: 176  IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
               +++H + +K GF +N  V  SLI+ YF  G    A N+F  L+  DV   N MI   
Sbjct: 487  KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 546

Query: 236  NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVRE 294
               G S     +F+ +L    E +  T  +V+ V + N+G +  G+ LHG  VK     E
Sbjct: 547  VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVL-VAWANIGNLSLGRALHGFGVKACFSEE 605

Query: 295  ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
            +   N ++ MY K G    A  +F  + +  ++SWT+ I+ YVR G    AI  F E   
Sbjct: 606  VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQS 665

Query: 355  LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             G+  D   + +++  C+  S+L+ G  +H + IK+G  S++ +  AL+++YAK G ++ 
Sbjct: 666  KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 725

Query: 415  ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            AR++      K    +N ++ G+ +    +E   + L  Q++    +PD +T + +L   
Sbjct: 726  ARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQF---KPDDITMACVLPAC 782

Query: 475  ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
            A  A L +GR +H + ++ GY +D+ V  AL+ MYAKCG +  A  +F  I  +D++SW 
Sbjct: 783  AGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWT 842

Query: 535  AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
             M++ Y +HG G  A+  F EM+  G  PD+ S   +L AC +SGL   G   FN +   
Sbjct: 843  VMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNE 902

Query: 595  YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
             G+ P LEH+AC+VDLL R G LS+A   I S P      +W  L+S  ++  + K +  
Sbjct: 903  CGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEK 962

Query: 655  ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
             ++ + +LEP +   +++++N+YA     +E  K+R  M      +  GCSWIE+  K +
Sbjct: 963  VAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFN 1022

Query: 715  HFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFEL 752
             FVA    HP+++ I    D+L  ++ +++++   F +
Sbjct: 1023 IFVAGNSKHPQAKRI----DVLLRKLTMQMQNEDYFSM 1056



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 201/388 (51%), Gaps = 4/388 (1%)

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           S  +E    ++ +V+ +C E   +E+GK++H + +  G+  + ++G  +V MY   G   
Sbjct: 362 SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLV 421

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +  ++FD I    +  W  L+S Y + G+  ++++ F +   LG+  +      V+   +
Sbjct: 422 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 481

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               ++   ++HG+ +K G+ S+  +  +L+  Y K G ++SA  L D  S      +N+
Sbjct: 482 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 541

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++G +  +     + + +F Q  + G+E D  T   +L   A+   L  GR+LH + +K
Sbjct: 542 MINGCV--VNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVK 599

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
             ++ +V+  N L+ MY+KCG+++GA ++F  + D  IVSW + ++AY   GL   A+ L
Sbjct: 600 ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGL 659

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+EM+ +G  PD  ++  ++ AC  S   + G  + + + +  G+   L     ++++  
Sbjct: 660 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYA 718

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLV 640
           + G + EA  + +  P  +  + W T++
Sbjct: 719 KCGSVEEARLVFSKIPVKDI-VSWNTMI 745


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 190/556 (34%), Positives = 315/556 (56%), Gaps = 10/556 (1%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVF   +LIS Y        A  +F  +   D    N +I  Y + G+++ AF +F+ + 
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +  + + +T + +I+ C  N+G+   +QLH L+V  G+   +SVGNA++T Y K+G  +
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 313 EAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           EA R+F  +SE R+ +SW +++  Y++   G KA+  +LE    G+  D   LA+V+   
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTAEF 430
           +   +L  GLQ H   IK GY  +  +G+ L+D+Y+K GG +   R + D  S      +
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N ++SG+     D  ++ +  F Q +  G  PD  +   ++S  ++ +   +GR +H  +
Sbjct: 311 NTMISGY-SLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369

Query: 491 IKTGYAADVI-VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           +K    ++ I V NALI MY+KCG++  A  +F  + + + VS+N+M++ YA HG+G  +
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LF+ M    F P +I+ + VL AC ++G  E G   FN ++Q +G+ P   HF+CM+D
Sbjct: 430 LHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMID 489

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGRAG+LSEA  LI + PF      W  L+   ++  N + +I A+ RLL L+P +A  
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP 549

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           +++++N+Y+  G L +AA VR  M D  + K+ GCSWIE++ ++H FVA    HP  ++I
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKI 609

Query: 730 YSKLDLLNDEMKLKVK 745
              L    +EM  K+K
Sbjct: 610 QEYL----EEMMRKIK 621



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/526 (24%), Positives = 242/526 (46%), Gaps = 43/526 (8%)

Query: 57  LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL------- 109
           L + + Q +K  I   DL+ G+++HA  +KS     T+ +N+ + LY+K  RL       
Sbjct: 7   LLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVF 66

Query: 110 ------------------------DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLG 145
                                   +VA +LFD M    ++++ +LI  Y   GD +    
Sbjct: 67  DHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQ 126

Query: 146 IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYF 205
           +  +M  +    +  T S I+ AC +    I   Q+HA ++ +G ++ V VG +LI+ Y 
Sbjct: 127 LFLEMREAFLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYS 184

Query: 206 HSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
            +G  +EA  +F  L+  +D    N M++ Y +  E   A  +++ +       + +T  
Sbjct: 185 KNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLA 244

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-HGMSEEAERMFDAISE 323
           +V++       +  G Q H   +K G  +   VG+ ++ +Y K  G   +  ++FD IS 
Sbjct: 245 SVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN 304

Query: 324 RNLISWTALISGY-VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
            +L+ W  +ISGY +      +A+  F +   +G   D   L  VI  CS  S+   G Q
Sbjct: 305 PDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQ 364

Query: 383 LHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           +HG A+K    S+ + +  AL+ +Y+K G+L+ A+ L D      T  +N++++G+ +  
Sbjct: 365 VHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG 424

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
              +   + LF +       P  +TF  +L+  A    +  G+ ++   +K  +  +   
Sbjct: 425 MGFQS--LHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEA 481

Query: 502 GN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           G+   +I +  + G +  A ++ + I  D     W+A+L A  +HG
Sbjct: 482 GHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHG 527



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 13/292 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN--RLDVAQKLFDGMLVRSAITWTSL 130
           DL  G   HA L+KSG   ++   + LI+LY+K     LD  +K+FD +     + W ++
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD-CRKVFDEISNPDLVLWNTM 313

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHT--CSVI--LEACSLLEDRIFGEQIHAFAI 186
           I GY     YE +   A + +R  +        CS++  + ACS +     G Q+H  A+
Sbjct: 314 ISGY---SLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370

Query: 187 KSGFENN-VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           K    +N + V  +LI+MY   G  R+A+ +F  +   +    N MI  Y + G    + 
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVGNAIVTM 304
           H+F  +L  DF P + TF +V++ C     VE+GK   + +  KFG+  E    + ++ +
Sbjct: 431 HLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDL 490

Query: 305 YGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            G+ G   EAER+ + I  +     W+AL+      G+   AI      L L
Sbjct: 491 LGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQL 542



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 4/130 (3%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           +F + L    +   L  G+SLHA  IK+       + N  + +Y+KC  +  A ++F   
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
            D ++ S+N ++SAYA     + A  LF+EM +    PD +S   ++ A    G ++   
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ----PDSVSYNTLIAAYARRGDTQPAF 125

Query: 586 CLFNEIEQIY 595
            LF E+ + +
Sbjct: 126 QLFLEMREAF 135


>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 182/516 (35%), Positives = 299/516 (57%), Gaps = 5/516 (0%)

Query: 229 NFMILEYNKA-GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
           N MI   + A  +S +A   +  +     +PN+ T+  +   C   L VE G+  H   +
Sbjct: 95  NVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVI 154

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           + G+  +  V ++++TMY + G   +A ++FD IS+++L+SW ++ISGY +  H G+A+ 
Sbjct: 155 RRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVG 214

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
            F E ++ G   +   L +V+  C    +L+LG  +  F +++    +  +G+AL+ +Y 
Sbjct: 215 LFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYG 274

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           K GDL SAR + D    K    +NA+++G+ +      E+ + LF   R++   PD +T 
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQN--GMSEEAIKLFQDMRMSSTAPDQITL 332

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
             +LS  AS   L  G+ +  Y+ + G+  DV VG AL+ MYAKCGS+D AF++F G+ +
Sbjct: 333 IGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPN 392

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREG--FAPDDISILGVLQACIYSGLSEGGI 585
           ++ VSWNAM+SA A HG  + AL LF+ M  EG   +P+DI+ +GVL AC+++GL + G 
Sbjct: 393 KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGR 452

Query: 586 CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
            LF+ +   +GL P +EH++CMVDL  RAG L EA + + + P     ++   L+   + 
Sbjct: 453 RLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQK 512

Query: 646 MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
             N   S    K LL+LEP ++G++++ S +YA     D++A++R  M    +SK  GCS
Sbjct: 513 RKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCS 572

Query: 706 WIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           WI+I+S+LH F A    H E  EI+  LDLL D+++
Sbjct: 573 WIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLR 608



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 221/475 (46%), Gaps = 19/475 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           +K  + +HA LL     N   + N+ +   A       A   F  +L  +  ++  +I+G
Sbjct: 45  IKQLKQIHAQLLT----NSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRG 100

Query: 134 YLDDGDYESVLGIACDMYRSEEKF-----NEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
                +  S   +A + Y S  KF     N  T   +  ACS L     G   H   I+ 
Sbjct: 101 LSTAWNKSS---LALEFY-SRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G + +  V  SLI+MY   G   +A  VF  ++ KD+   N MI  Y+K   +  A  +F
Sbjct: 157 GLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLF 216

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             ++ + F+PN+ +  +V+  C E   ++ G  +    V+  +     +G+A++ MYGK 
Sbjct: 217 REMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKC 276

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A R+FD++ +++ ++W A+I+GY ++G   +AI  F +        D   L  ++
Sbjct: 277 GDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGIL 336

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+    L+LG Q+  +A + G+  DV +GTALVD+YAK G L +A  +  G   K   
Sbjct: 337 SACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEV 396

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAG--MEPDPVTFSRLLSLSASQACLVRGRSL 486
            +NA++S          ++ + LF      G  + P+ +TF  +LS       +  GR L
Sbjct: 397 SWNAMISAL--AFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRL 454

Query: 487 -HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSA 539
            H  S   G    +   + ++ ++++ G ++ A+     + ++ D V   A+L A
Sbjct: 455 FHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGA 509



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 133/246 (54%), Gaps = 3/246 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDLKLG  V  F++++    + F  + LI++Y K   L  A+++FD M  +  +TW ++I
Sbjct: 242 GDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMI 301

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G  E  + +  DM  S    ++ T   IL AC+ +     G+Q+  +A + GF+
Sbjct: 302 TGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQ 361

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++V+VGT+L+ MY   G    A  VF G+  K+    N MI      G+++ A  +F  +
Sbjct: 362 DDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSM 421

Query: 252 LSS--DFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGKH 308
           ++      PND TF  V+S C     V+EG++L H ++  FG+V +I   + +V ++ + 
Sbjct: 422 MNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRA 481

Query: 309 GMSEEA 314
           G  EEA
Sbjct: 482 GHLEEA 487


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 218/731 (29%), Positives = 372/731 (50%), Gaps = 23/731 (3%)

Query: 13  PFKSQQSLPPLKK--KVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIG 70
           PF S+QS+        V +++    P     +L  + SV          D+ +LV+ +  
Sbjct: 24  PFSSRQSIESFATLGSVSLSSSQVFPAYSSTFL--LESV----------DYVKLVQSATK 71

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L  G+ VH+ ++K+  +   F  NNL+N+Y K      A KLFD M   + +T+ SL
Sbjct: 72  TGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSL 131

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY+   + + V+ +     R   K +++TC+  L ACS   +   G+ IH   +  G 
Sbjct: 132 ISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGL 191

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            + V +  SLI MY   G    A  +F      D    N +I  Y + G+ E    +   
Sbjct: 192 GSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQK 251

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEE--GKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +  +    N YT  + +  C  N    +  G  LH  A+K G+  ++ VG A++ MY K 
Sbjct: 252 MHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKT 311

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGH-----GGKAINGFLEFLDLGICCDSSC 363
           G  ++A ++FD + ++N++ + A+++G ++          KA+N F E    GI      
Sbjct: 312 GSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFT 371

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            ++++  C +  + +   Q+H    K+G LSD  +G+ L+D+Y+  G +  A +  +   
Sbjct: 372 YSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIH 431

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
                   A++ G+++    + E  + LF +      +PD    S ++S  A+   L  G
Sbjct: 432 NLTIVPMTAMIXGYLQN--GEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSG 489

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             +  ++ K G +   I  N+ I MYAK G +  A   F+ + + DIVSW+ M+ + A H
Sbjct: 490 EQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQH 549

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G    AL  FE MK  G  P+  + LGVL AC + GL E G+  F+ +E+ Y ++  ++H
Sbjct: 550 GHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKH 609

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
             C+VDLLGRAGRL++A +LI    F   P++WR L+S  ++  ++  +   ++++++LE
Sbjct: 610 CVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELE 669

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P  + S++L+ N+Y   G    A+KVRT M + R+ KE G SWI+I  K++ FV+  + H
Sbjct: 670 PLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSH 729

Query: 724 PESEEIYSKLD 734
             S +IY+KLD
Sbjct: 730 KNSGQIYAKLD 740


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 208/665 (31%), Positives = 352/665 (52%), Gaps = 3/665 (0%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           +++HA ++K+    ++F A  LI +Y+    L  A+ +FD   +       ++I G+L +
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
             +  V  +   M   + + N +TC   L+AC+ L D   G +I   A++ GF  +++VG
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           +S+++     G   +A+ VF G+  KDV C N +I  Y + G    +  +F+ ++     
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+  T  N++  C ++   + G   H   +  G+  ++ V  ++V MY   G +  A  +
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD++  R+LISW A+ISGYV++G   ++   F   +  G   DS  L ++I GCS  S+L
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           E G  LH   I+    S + L TA+VD+Y+K G +K A ++      K    + A+L G 
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGL 423

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +      ED + LF Q +   +  + VT   L+   A    L +GR++HA+ I+ GYA 
Sbjct: 424 SQN--GYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAF 481

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKG-ISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           D ++ +ALI MYAKCG I  A ++F      +D++  N+M+  Y +HG G+ AL ++  M
Sbjct: 482 DAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRM 541

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
             E   P+  + + +L AC +SGL E G  LF+ +E+ + +RP  +H+AC+VDL  RAGR
Sbjct: 542 IEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGR 601

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L EA  L+   PF  S  +   L+S  +   N+   I  + RL+ L+  ++G ++++SN+
Sbjct: 602 LEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNI 661

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA     +    +R  M    + K  G S IE+ +K++ F AS   HP   +IY  L+ L
Sbjct: 662 YAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENL 721

Query: 737 NDEMK 741
             E++
Sbjct: 722 RLEVE 726



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 204/415 (49%), Gaps = 3/415 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D ++G  +    ++ G     +  ++++N   K   L  AQK+FDGM  +  + W S+I 
Sbjct: 160 DDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIG 219

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY+  G +   + +  +M     + +  T + +L+AC     +  G   H++ +  G  N
Sbjct: 220 GYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGN 279

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +VFV TSL+ MY + G    A  VF  +  + +   N MI  Y + G    ++ +F  L+
Sbjct: 280 DVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLV 339

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S    +  T  ++I  C +   +E G+ LH   ++  +   + +  AIV MY K G  +
Sbjct: 340 QSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIK 399

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A  +F  + ++N+I+WTA++ G  ++G+   A+  F +  +  +  +S  L +++  C+
Sbjct: 400 QATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCA 459

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG-FSCKYTAEFN 431
              +L  G  +H   I+HGY  D  + +AL+D+YAK G + SA  L +  F  K     N
Sbjct: 460 HLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCN 519

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
           +++ G+   +       + ++S+     ++P+  TF  LL+  +    +  G++L
Sbjct: 520 SMIMGY--GMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKAL 572



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 177/377 (46%), Gaps = 3/377 (0%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
            L+K    SG  K+G   H+++L  G  ND F   +L+++Y+       A  +FD M  R
Sbjct: 251 NLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSR 310

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           S I+W ++I GY+ +G       +   + +S   F+  T   ++  CS   D   G  +H
Sbjct: 311 SLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILH 370

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           +  I+   E+++ + T+++ MY   G  ++A  VF  +  K+V     M++  ++ G +E
Sbjct: 371 SCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAE 430

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  +F  +       N  T  +++  C     + +G+ +H   ++ G   +  + +A++
Sbjct: 431 DALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALI 490

Query: 303 TMYGKHGMSEEAERMF-DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
            MY K G    AE++F +    +++I   ++I GY   GHG  A+  +   ++  +  + 
Sbjct: 491 DMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQ 550

Query: 362 SCLATVIDGCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +   +++  CS    +E G  L H     H      +    LVD++++ G L+ A  L+ 
Sbjct: 551 TTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVK 610

Query: 421 GFSCKYTAE-FNAILSG 436
               + + +   A+LSG
Sbjct: 611 QMPFQPSTDVLEALLSG 627


>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 206/614 (33%), Positives = 326/614 (53%), Gaps = 8/614 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +H  +LKS S  D    N+++N+Y K   L  AQK+FD M  R+ ++WTS+I G
Sbjct: 79  LEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAG 138

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G   + L     M +S    ++ T   I++ACS L D   G Q+HA  +KS F  +
Sbjct: 139 YSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAH 198

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +    +LISMY  S    +A +VF  +A +D+     MI  +++ G    A   F  +L 
Sbjct: 199 IIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLH 258

Query: 254 SD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              + PN++ F +V S C   L  E G+QLHG+++KFG+ R++  G ++  MY K G+  
Sbjct: 259 QGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLS 318

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +F  I   +L++W A+I+G+   G   +AI  F +    G+  D   + +++  C+
Sbjct: 319 CARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACT 378

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT-AEFN 431
             S L  G+Q+HG+  K G   DV +   L+ +YAK  +L+ A    +   C      +N
Sbjct: 379 SPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWN 438

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           AIL+  M    D  E+V  L     ++   PD +T + +L  SA    +  G  +H Y++
Sbjct: 439 AILTACMHH--DQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYAL 496

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           KTG   D+ V N LI +YAKCGS+  A +IF  + + D+VSW++++  YA  G G+ AL 
Sbjct: 497 KTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALK 556

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF+ M+R    P+ ++ +GVL AC + GL E G  L+  +E+ +G+ P  EH +CMVDLL
Sbjct: 557 LFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLL 616

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG L+EA   I+   F    ++W+TL++  K    S    LA +  L +  K      
Sbjct: 617 ARAGCLNEAEAFIHQMAFDPDIVVWKTLLAACK----SVHQALARRTNLKVWKKQHEVIT 672

Query: 672 LVSNMYAGQGMLDE 685
           LV   +     +D 
Sbjct: 673 LVKGKFVYVKQIDR 686



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 259/544 (47%), Gaps = 23/544 (4%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T + ++ ACS L     G +IH   +KS    ++ +   +++MY   G  ++A+ VF  +
Sbjct: 65  TYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAM 124

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             ++V     +I  Y++ G+   A   +  +L S   P+ +TF ++I  C     +  G+
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           QLH   +K      I   NA+++MY K  +  +A  +F  ++ R+LISW ++I+G+ + G
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLG 244

Query: 341 HGGKAINGFLEFLDLGICCDSS-CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           +  +A+  F E L  G+   +     +V   CS     E G QLHG +IK G   DV  G
Sbjct: 245 YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAG 304

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            +L D+YAK G L  AR++           +NAI++GF      D ++ +  FSQ R  G
Sbjct: 305 CSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGF--AYGGDAKEAIAFFSQMRHQG 362

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           + PD +T   LL    S + L +G  +H Y  K G   DV V N L+TMYAKC  +  A 
Sbjct: 363 LIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAI 422

Query: 520 QIFKGIS-DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             F+ +  + D+VSWNA+L+A   H   +    L + M      PD I++  VL A   +
Sbjct: 423 FFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAET 482

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFAC-------MVDLLGRAGRLSEAMNLINSSPFSE 631
              E G    N++   Y L+  L    C       ++DL  + G L  A  + +S   + 
Sbjct: 483 VSIEIG----NQV-HCYALKTGLN---CDISVTNGLIDLYAKCGSLKTARKIFDSV-INP 533

Query: 632 SPLLWRTLV--SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
             + W +L+              +  + R LD++P    +F+ V    +  G+++E  ++
Sbjct: 534 DVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHV-TFVGVLTACSHVGLVEEGWQL 592

Query: 690 RTTM 693
             TM
Sbjct: 593 YGTM 596



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 226/481 (46%), Gaps = 8/481 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K     GD+ LG+ +HA +LKS         N LI++Y K N +  A  +F  M  R 
Sbjct: 170 IIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRD 229

Query: 124 AITWTSLIKGYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
            I+W S+I G+   G + E++      +++     NE     +  ACS L    +G Q+H
Sbjct: 230 LISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLH 289

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             +IK G   +VF G SL  MY   G    A  VF  +   D+   N +I  +   G+++
Sbjct: 290 GMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAK 349

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A   F  +      P++ T  +++  C     + +G Q+HG   K G+  ++ V N ++
Sbjct: 350 EAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLL 409

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-CD 360
           TMY K     +A   F+ +    +L+SW A+++  +      + + G L+ + +     D
Sbjct: 410 TMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQ-AEEVFGLLKLMCISQHRPD 468

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              L  V+   +   ++E+G Q+H +A+K G   D+ +   L+D+YAK G LK+AR + D
Sbjct: 469 YITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFD 528

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                    +++++ G+ +      E+ + LF   R   ++P+ VTF  +L+  +    +
Sbjct: 529 SVINPDVVSWSSLILGYAQ--FGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLV 586

Query: 481 VRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
             G  L+    K  G        + ++ + A+ G ++ A      ++ D DIV W  +L+
Sbjct: 587 EEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLA 646

Query: 539 A 539
           A
Sbjct: 647 A 647



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 120/235 (51%), Gaps = 6/235 (2%)

Query: 344 KAINGFLEFLD--LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
           +AI  F EFL    G C   S  A +I  CS   +LE G ++H   +K     D+ L   
Sbjct: 45  EAIKAF-EFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNH 103

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           ++++Y K G LK A+ + D    +    + ++++G+ +       + +  + Q   +G+ 
Sbjct: 104 ILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQN--GQGGNALEFYFQMLQSGVM 161

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           PD  TF  ++   +S   +  GR LHA+ +K+ + A +I  NALI+MY K   I  A  +
Sbjct: 162 PDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDV 221

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQAC 575
           F  ++ RD++SW +M++ ++  G    AL  F+EM  +G + P++     V  AC
Sbjct: 222 FSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSAC 276


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 189/582 (32%), Positives = 324/582 (55%), Gaps = 4/582 (0%)

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIK-SGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           C  +L++ +  +    G+Q+HA  I  S  ENN ++ T L + Y   G   +AE +F G+
Sbjct: 62  CGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGI 121

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             K+    NFMI  Y   G    +  ++  +L      +++T+  V+  C + L VE G+
Sbjct: 122 VLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGR 181

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++H   V  G+  +I VGN+++ MY K G    A  +FD ++ER+L SW  +ISGY ++ 
Sbjct: 182 RVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNA 241

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
             G A   F      G+  D + L  ++  C+    ++ G  +HG+A+++   +  +  T
Sbjct: 242 DSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFT 301

Query: 401 -ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            +L+++Y     +  AR L +    K T  +N+++ G+      D  + + LF +  L G
Sbjct: 302 NSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARN--GDAFESLRLFRRMALDG 359

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
             PD VTF  +L      A L  G S+H+Y +K G+ A+ IVG AL+ MY+KCGS+  + 
Sbjct: 360 SGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSR 419

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           ++F  + D+ +VSW+AM++ Y LHG G+ A+ + + MK     PD+     +L AC ++G
Sbjct: 420 RVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAG 479

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           L   G  +F ++E+ Y ++P L H++CMVDLLGRAG L EA  +I +     +  +W  L
Sbjct: 480 LVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAAL 539

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           ++ S+L  N K + ++++++ D+ PK   S+I +SN+YA +   D+  +VR  +    L 
Sbjct: 540 LTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLK 599

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           K  GCS+IE+D+ +H F+   K H ++E+IY+KL+ L  ++K
Sbjct: 600 KSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLK 641



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 233/475 (49%), Gaps = 8/475 (1%)

Query: 74  LKLGQAVHAFLLK-SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
            K GQ +HA ++  S  +N+T+    L   YA    +  A+ +FDG++++++  W  +I+
Sbjct: 75  FKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIR 134

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY  +G     L +  +M    ++ +  T   +L+AC  L     G ++H+  +  G E+
Sbjct: 135 GYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLES 194

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +++VG SL++MY   G    A  VF  +A +D+   N MI  Y K  +S  AF VF  + 
Sbjct: 195 DIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMG 254

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMS 311
            +    +  T   ++S C +   V+EGK +HG AV+  +        N+++ MY      
Sbjct: 255 KAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCM 314

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +A R+F+ +  ++ +SW ++I GY R+G   +++  F      G   D      V+  C
Sbjct: 315 VDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGAC 374

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
              + L  G+ +H + +K G+ ++  +GTALVD+Y+K G L  +R + D    K    ++
Sbjct: 375 DQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWS 434

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+++G+   +     + + +    +   + PD   F+ +LS  +    +V G+ +  Y +
Sbjct: 435 AMVAGY--GLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIF-YKM 491

Query: 492 KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
           +  Y     + +   ++ +  + G +D A+ I + +  +     W A+L+A  LH
Sbjct: 492 EKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLH 546



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 182/374 (48%), Gaps = 17/374 (4%)

Query: 72  GDL---KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           GDL   ++G+ VH+ ++  G ++D +  N+L+ +YAKF  +  A+ +FD M  R   +W 
Sbjct: 172 GDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWN 231

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV-ILEACSLLEDRIFGEQIHAFAIK 187
           ++I GY  + D  +   +  D+      F + T  + +L AC+ L+    G+ IH +A++
Sbjct: 232 TMISGYAKNADSGTAF-LVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVR 290

Query: 188 SGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           +   N N F   SLI MY +  C  +A  +F  + +KD    N MIL Y + G++  +  
Sbjct: 291 NSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLR 350

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F  +      P+  TF  V+  C +   +  G  +H   VK G      VG A+V MY 
Sbjct: 351 LFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYS 410

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G    + R+FD + +++L+SW+A+++GY   G G +AI+         +  D+    +
Sbjct: 411 KCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTS 470

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL------VDIYAKGGDLKSARMLLD 420
           ++  CS       GL + G  I +    +  +  AL      VD+  + G L  A +++ 
Sbjct: 471 ILSACS-----HAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIR 525

Query: 421 GFSCKYTAEFNAIL 434
               K T++  A L
Sbjct: 526 TMEIKPTSDIWAAL 539


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 205/663 (30%), Positives = 347/663 (52%), Gaps = 4/663 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           + A L+  G   D      L + +     +   ++LF+ +       +  LI+G+ D+G 
Sbjct: 33  IQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGL 92

Query: 140 YESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
            +S + +   + +    + +  T +  + A S LED   G  +HA +I  G  +N+FVG+
Sbjct: 93  PKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGS 152

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +++ +YF       A  VF  +  +D    N MI  +++    E +  VFV +L      
Sbjct: 153 AIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSF 212

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +  T   V++   E      G  +  LA K G+  ++ V   ++++Y K G S +   +F
Sbjct: 213 DSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILF 272

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           D I + +LIS+ A+ISGY  +     A+  F E L  G   +SS L  +I      ++L+
Sbjct: 273 DQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQ 332

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
           L   +   ++K G +    + TAL  +Y +  +++ AR L D    K  A +NA++SG+ 
Sbjct: 333 LSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYT 392

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
           +    D    + LF Q+ +  + P+PVT + +LS  A    L  G+ +H         ++
Sbjct: 393 QNGLTDR--AISLF-QEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           V V  AL+ MYAKCGSI  A Q+F  + D+++V+WNAM++ Y LHG GK AL LF EM +
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS 618
            G  P  ++ L +L AC +SGL   G  +F+ +   YG +P+ EH+ACMVD+LGRAG+L+
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569

Query: 619 EAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
            A+  I   P    P +W  L+    +  N++ + +ASKRL  L+P++ G ++L+SN+Y+
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629

Query: 679 GQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLND 738
                 +AA VR  +   +L+K  GC+ IEID + + F +  + HP++  I+  L+ L  
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTG 689

Query: 739 EMK 741
           +M+
Sbjct: 690 KMR 692



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 231/473 (48%), Gaps = 5/473 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D ++G  +HA  +  G  ++ F  + +++LY KF R ++A+K+FD M  R  + W ++I 
Sbjct: 128 DERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMIS 187

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G+  +  +E  + +  DM      F+  T + +L A + L++   G  I   A K G  +
Sbjct: 188 GFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHS 247

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +V+V T LIS+Y   G   +   +F  +   D+   N MI  Y    E+E A  +F  LL
Sbjct: 248 DVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL 307

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +S    N  T   +I V      ++  + +  L++K G++ + SV  A+ T+Y +    +
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQ 367

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A ++FD   E++L SW A+ISGY ++G   +AI+ F E +   +  +   + +++  C+
Sbjct: 368 FARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACA 426

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               L +G  +HG        S+V + TALVD+YAK G +  AR L D    K    +NA
Sbjct: 427 QLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNA 486

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-HAYSI 491
           +++G+   +    ++ + LF +   +G+ P  VTF  +L   +    +  G  + H+ + 
Sbjct: 487 MITGY--GLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
             G+         ++ +  + G +  A +  + +  +     W A+L A  +H
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 2/228 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ + +    L+L + +    LK G       +  L  +Y + N +  A++LFD    +S
Sbjct: 321 LIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKS 380

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W ++I GY  +G  +  + +  +M   +   N  T + IL AC+ L     G+ +H 
Sbjct: 381 LASWNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHG 439

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
                  E+NV+V T+L+ MY   G   EA  +F  +  K+V   N MI  Y   G  + 
Sbjct: 440 LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKE 499

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFG 290
           A  +F  +L S   P   TF +++  C  +  V EG ++ H +A  +G
Sbjct: 500 ALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG 547



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           T+++  +  S L   LQ+    I HG   D+   T L   +   G +   R L +  S  
Sbjct: 19  TLLNNATTLSQL---LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKP 75

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               FN ++ GF +     +  + +    ++   + PD  T++  +S ++       G  
Sbjct: 76  DLFLFNVLIRGFSDN-GLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVL 134

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           LHA+SI  G A+++ VG+A++ +Y K    + A ++F  + +RD V WN M+S ++ +  
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQA 574
            + ++ +F +M   G + D  ++  VL A
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTA 223



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L +G+ VH  +     +++ + +  L+++YAK   +  A++LFD M+ ++ +TW ++I
Sbjct: 429 GALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMI 488

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI-HAFAIKSGF 190
            GY   G  +  L +  +M +S       T   IL ACS       G +I H+ A   GF
Sbjct: 489 TGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 191 E 191
           +
Sbjct: 549 Q 549


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 190/659 (28%), Positives = 346/659 (52%), Gaps = 3/659 (0%)

Query: 83  FLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYES 142
           F++K+G  N+      +I+L+ KF     A ++F+ + ++  + +  ++KGY  +     
Sbjct: 69  FIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGD 128

Query: 143 VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLIS 202
            L     M   E +      + +L+ C    D   G +IH   I +GFE+N+FV T+++S
Sbjct: 129 ALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMS 188

Query: 203 MYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYT 262
           +Y        A  +F  + +KD+     ++  Y + G ++ A  + + +  +  +P+  T
Sbjct: 189 LYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVT 248

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
             +++    +   +  G+ +HG A + G    ++V NA++ MY K G +  A  +F  + 
Sbjct: 249 LVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMR 308

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
            + ++SW  +I G  ++G   +A   FL+ LD G       +  V+  C+   +LE G  
Sbjct: 309 SKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWF 368

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H    K    S+V +  +L+ +Y+K   +  A  + +    K    +NA++ G+ +   
Sbjct: 369 VHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGC 427

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
             E   + LF   +  G++ D  T   +++  A  +   + + +H  +++     +V V 
Sbjct: 428 VKE--ALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVS 485

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
            AL+ MYAKCG+I  A ++F  + +R +++WNAM+  Y  HG+GK  L LF EM++    
Sbjct: 486 TALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVK 545

Query: 563 PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMN 622
           P+DI+ L V+ AC +SG  E G+ LF  +++ Y L P ++H++ MVDLLGRAG+L +A N
Sbjct: 546 PNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWN 605

Query: 623 LINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGM 682
            I   P      +   ++   K+  N +    A+++L  L+P + G  +L++N+YA   M
Sbjct: 606 FIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSM 665

Query: 683 LDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            D+ AKVRT M D  L K  GCSW+E+ +++H F +   +HPES++IY+ L+ L DE+K
Sbjct: 666 WDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIK 724



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/526 (29%), Positives = 269/526 (51%), Gaps = 13/526 (2%)

Query: 43  LCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINL 102
           LC    + C E  L+  D+  L+++   + DLK G+ +H  ++ +G +++ F    +++L
Sbjct: 130 LCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSL 189

Query: 103 YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC 162
           YAK  ++D A K+F+ M  +  ++WT+L+ GY  +G  +  L +   M  + +K +  T 
Sbjct: 190 YAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTL 249

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
             IL A + ++    G  IH +A +SGFE+ V V  +L+ MYF  G  R A  VF+G+  
Sbjct: 250 VSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRS 309

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQ 281
           K V   N MI    + GESE AF  F+ +L     P   T   V+  C  NLG +E G  
Sbjct: 310 KTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLAC-ANLGDLERGWF 368

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +H L  K  +   +SV N++++MY K    + A  +F+ + + N ++W A+I GY ++G 
Sbjct: 369 VHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGC 427

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             +A+N F      GI  D   L  VI   +  S       +HG A++    ++V + TA
Sbjct: 428 VKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTA 487

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           LVD+YAK G +K+AR L D    ++   +NA++ G+       E   + LF++ +   ++
Sbjct: 488 LVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKE--TLDLFNEMQKGAVK 545

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAF 519
           P+ +TF  ++S + S +  V    L   S++  Y  +  + +  A++ +  + G +D A+
Sbjct: 546 PNDITFLSVIS-ACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAW 604

Query: 520 QIFKGISDRDIVS-WNAMLSAYALHG---LG-KGALLLFEEMKREG 560
              + +  +  +S   AML A  +H    LG K A  LF+    EG
Sbjct: 605 NFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEG 650



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 213/417 (51%), Gaps = 6/417 (1%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           + H   V+LE C+  ++     QI  F IK+GF N     T +IS++   G   EA  VF
Sbjct: 46  HRHPSVVLLENCTSKKELY---QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVF 102

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +  K     + M+  Y K      A   F+ ++  +       +  ++ +C ENL ++
Sbjct: 103 EHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLK 162

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           +G+++HGL +  G    + V  A++++Y K    + A +MF+ +  ++L+SWT L++GY 
Sbjct: 163 KGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYA 222

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           ++GH  +A+   L+  + G   DS  L +++   +    L +G  +HG+A + G+ S V 
Sbjct: 223 QNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVN 282

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +  AL+D+Y K G  + AR++  G   K    +N ++ G  +    + E+    F +   
Sbjct: 283 VTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQN--GESEEAFATFLKMLD 340

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
            G  P  VT   +L   A+   L RG  +H    K    ++V V N+LI+MY+KC  +D 
Sbjct: 341 EGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDI 400

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           A  IF  + ++  V+WNAM+  YA +G  K AL LF  M+ +G   D  +++GV+ A
Sbjct: 401 AASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITA 456


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 205/670 (30%), Positives = 347/670 (51%), Gaps = 18/670 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D+ LG  +    LK G +     AN+LI ++     ++ A  +F+ M  R  I+W S+I 
Sbjct: 175 DIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIIS 234

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
               +  +E        M    E+ N  T S++L  C  ++   +G+ +H  A+K G E+
Sbjct: 235 ANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLES 294

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N+ +  +L+S+Y  +G  ++AE +FR +  +D+   N M+  Y + G    A  VF  +L
Sbjct: 295 NICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEML 354

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               E N  TFT+ ++ C +      GK LHG  V  G+  E+ +GN ++T YGK     
Sbjct: 355 WMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMA 414

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGF---LEFLDLGICCDSSCLATVID 369
           EA+++F  + + + ++W ALI G+  +    +A+  F    E    G+  D   +  ++ 
Sbjct: 415 EAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILG 472

Query: 370 GCSVCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            C    +L + G+ +H   +  G+  D  + ++L+ +YAK GDL S+  + D    K ++
Sbjct: 473 SCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSS 532

Query: 429 EFNAILS-----GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +NAI++     GF        E+ + L  + R AG+E D   FS  LS++A  A L  G
Sbjct: 533 VWNAIIAANARYGF-------GEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEG 585

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + LH  +IK G+  D  + NA + MY KCG +D A +I    +DR  +SWN ++S  A H
Sbjct: 586 QQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARH 645

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G    A   F +M + G  P+ +S + +L AC + GL + G+  +  +  +YG++P +EH
Sbjct: 646 GQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEH 705

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
             CM+DLLGR+GRL EA   I   P   + L+WR+L++  ++  N      A+K LL+L+
Sbjct: 706 CVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELD 765

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P D  +++L SN++A  G  ++   VR  M   ++ K+   SW++    +  F    + H
Sbjct: 766 PSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTH 825

Query: 724 PESEEIYSKL 733
           P+ E+I  KL
Sbjct: 826 PQMEQINGKL 835



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 171/630 (27%), Positives = 295/630 (46%), Gaps = 17/630 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           K G   H F +K G   D F   + ++ YA +  +  AQK+F+ M  R+ ++WTSL+  Y
Sbjct: 76  KEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSY 135

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
            D+G  + V+     M       NE+  ++++ +C  L D I G Q+   A+K G E  V
Sbjct: 136 SDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKV 195

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
               SLI M+   G   EA ++F  +  +D    N +I    +    E +F  F  +   
Sbjct: 196 SAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLV 255

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
             E N  T + ++S+C     ++ GK +HGLAVK+G+   I + N ++++Y   G S++A
Sbjct: 256 HEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDA 315

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
           E +F  + ER+LISW ++++ YV+ G    A+  F E L +    +     + +  C   
Sbjct: 316 ELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDP 375

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
                G  LHGF +  G   ++ +G  L+  Y K   +  A+ +           +NA++
Sbjct: 376 EFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALI 435

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR-GRSLHAYSIKT 493
            GF    A+  E V      +  +    D +T   +L    +   L++ G  +HA+++ T
Sbjct: 436 GGFANN-AELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVT 494

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+  D  V ++LITMYAKCG +  +  IF  +  +    WNA+++A A +G G+ AL L 
Sbjct: 495 GFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLV 554

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG----LRPILEHFA--CM 607
             M+  G   D  +    L            + +  E +Q++G    L   L+HF     
Sbjct: 555 VRMRSAGIEFDQFNFSTALSVA-------ADLAMLEEGQQLHGSTIKLGFELDHFIINAA 607

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK-D 666
           +D+ G+ G L +A+ ++   P   S L W TL+S+S        +      +L L  K +
Sbjct: 608 MDMYGKCGELDDALRIL-PQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPN 666

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             SF+ + +  +  G++DE      +M  +
Sbjct: 667 HVSFVCLLSACSHGGLVDEGLAYYASMTSV 696



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 159/666 (23%), Positives = 304/666 (45%), Gaps = 68/666 (10%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y+KF R++ AQ +FD M  R+  +W  ++ GY+  G Y   +    D+     K +   
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 162 CSVILEAC---SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR 218
            + ++ AC   S++     G Q H FAIK G   +VFVGTS +  Y   G    A+ +F 
Sbjct: 61  IASLVTACNKSSIMAKE--GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFN 118

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            +  ++V     +++ Y+  G  +   + +  +       N+     VIS C   + +  
Sbjct: 119 EMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIIL 178

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G QL G A+KFG+  ++S  N+++ M+G  G   EA  +F+ ++ER+ ISW ++IS   +
Sbjct: 179 GHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQ 238

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +    ++   F     +    + + L+ ++  C     L+ G  +HG A+K+G  S++ L
Sbjct: 239 NTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL--FSQQR 456
              L+ +Y+  G  K A ++      +    +N++L+ +++    D   +  L  F++  
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQ----DGRCLCALKVFAEML 354

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
               E + VTF+  L+          G+ LH + +  G   ++I+GN LIT Y KC  + 
Sbjct: 355 WMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMA 414

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP--DDISILGVLQA 574
            A ++F+ +   D V+WNA++  +A +     A+  F+ M REG     D I+I+ +L  
Sbjct: 415 EAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLM-REGSTSGVDYITIVNIL-- 471

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHF------------ACMVDLLGRAGRLSEAMN 622
                    G CL +E    YG+ PI  H             + ++ +  + G L  +  
Sbjct: 472 ---------GSCLTHEDLIKYGI-PIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSY 521

Query: 623 LINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG------SFILVSNM 676
           + +   F  S  +W  +++     AN+++        L +  + AG      +F    ++
Sbjct: 522 IFDQLVFKTSS-VWNAIIA-----ANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSV 575

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
            A   ML+E  ++  +              I++  +L HF+ +      + ++Y K   L
Sbjct: 576 AADLAMLEEGQQLHGST-------------IKLGFELDHFIINA-----AMDMYGKCGEL 617

Query: 737 NDEMKL 742
           +D +++
Sbjct: 618 DDALRI 623


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 201/678 (29%), Positives = 352/678 (51%), Gaps = 11/678 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K     G+ +LG  +H   +K G     F  N LI +Y K   L  A+ LFDG++
Sbjct: 148 FPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIM 207

Query: 121 VRS--AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF- 177
           +     ++W S+I  ++ +G     L +   M       N +T    L+    +ED  F 
Sbjct: 208 MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQG---VEDPSFV 264

Query: 178 --GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G  IH  A+KS    +V+V  +LI+MY   G   +AE VF  +  +D    N ++   
Sbjct: 265 KLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGL 324

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            +      A + F  + +S  +P+  +  N+I+    +  +  GK++H  A++ G+   +
Sbjct: 325 VQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNM 384

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            +GN ++ MY K    +     F+ + E++LISWT +I+GY ++    +AIN F +    
Sbjct: 385 QIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVK 444

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D   + +V+  CS   +     ++HG+  K   L+D+ L  A+V++Y + G    A
Sbjct: 445 GMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD-LADIMLQNAIVNVYGEVGHRDYA 503

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R   +    K    + ++++  +      E   + LF   +   ++PD +     LS +A
Sbjct: 504 RRAFESIRSKDIVSWTSMITCCVHNGLPVE--ALELFYSLKQTNIQPDSIAIISALSATA 561

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           + + L +G+ +H + I+ G+  +  + ++L+ MYA CG+++ + ++F  +  RD++ W +
Sbjct: 562 NLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTS 621

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++A  +HG G  A+ LF++M  E   PD I+ L +L AC +SGL   G   F  ++  Y
Sbjct: 622 MINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGY 681

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            L P  EH+ACMVDLL R+  L EA   + S P   S  +W  L+    + +N +   LA
Sbjct: 682 QLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELA 741

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           +K LL  + K++G + L+SN++A  G  ++  +VR  M    L K  GCSWIE+D+K+H 
Sbjct: 742 AKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHT 801

Query: 716 FVASGKDHPESEEIYSKL 733
           F+A  K HP++++IY KL
Sbjct: 802 FMARDKSHPQTDDIYLKL 819



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 177/654 (27%), Positives = 307/654 (46%), Gaps = 19/654 (2%)

Query: 16  SQQSLPPLK-KKVPINTFSP---NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGS 71
           S   + PL  K + +NT +    NP  Q   L S   ++   R  L +    L+ + +  
Sbjct: 2   STSIVTPLPLKSISVNTLNKGTLNPAFQSLTLLSTHPLATPSR--LEHAHSLLLDLCVAV 59

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
             L  GQ +HA LLKS      F A  L+++Y K   L  A K+FD M  R+  TW +++
Sbjct: 60  KALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMM 117

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             ++  G Y   + +  +M       +  T   +L+AC  L +   G +IH  A+K GF 
Sbjct: 118 GAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFG 177

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAY--KDVRCVNFMILEYNKAGESEMAFHVFV 249
             VFV  +LI+MY   G    A  +F G+    +D    N +I  +   G+   A  +F 
Sbjct: 178 EFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFR 237

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +       N YTF   +    +   V+ G  +HG A+K     ++ V NA++ MY K G
Sbjct: 238 RMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCG 297

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E+AER+F ++  R+ +SW  L+SG V++     A+N F +  +     D   +  +I 
Sbjct: 298 RMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIA 357

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
                 NL  G ++H +AI++G  S++++G  L+D+YAK   +K      +    K    
Sbjct: 358 ASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLIS 417

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +  I++G+ +   +   + + LF + ++ GM+ DP+    +L   +        R +H Y
Sbjct: 418 WTTIIAGYAQN--ECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGY 475

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
             K    AD+++ NA++ +Y + G  D A + F+ I  +DIVSW +M++    +GL   A
Sbjct: 476 VFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEA 534

Query: 550 LLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLR-PILEHFACM 607
           L LF  +K+    PD I+I+  L A    S L +G       I + + L  PI    + +
Sbjct: 535 LELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA---SSL 591

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           VD+    G +  +  + +S       +LW ++++ + +      +I   K++ D
Sbjct: 592 VDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHGCGNEAIALFKKMTD 644


>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 182/516 (35%), Positives = 298/516 (57%), Gaps = 5/516 (0%)

Query: 229 NFMILEYNKA-GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
           N MI   + A  +S +A   +  +     +PN+ T+  +   C   L VE G+  H   +
Sbjct: 95  NVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVI 154

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           + G+  +  V ++++TMY + G   +A ++FD IS+++L+SW ++ISGY +  H G+A+ 
Sbjct: 155 RRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVG 214

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
            F E ++ G   +   L +V+  C    +L+LG  +  F +++    +  +G+AL+ +Y 
Sbjct: 215 LFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYG 274

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           K GDL SAR + D    K    +NA+++G+ +      E+ + LF   R++   PD +T 
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQN--GMSEEAIKLFQDMRMSSTAPDQITL 332

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
             +LS  AS   L  G+ +  Y+ + G+  DV VG AL+ MYAKCGS+D AF++F G+  
Sbjct: 333 IGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPK 392

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREG--FAPDDISILGVLQACIYSGLSEGGI 585
           ++ VSWNAM+SA A HG  + AL LF+ M  EG   +P+DI+ +GVL AC+++GL + G 
Sbjct: 393 KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGR 452

Query: 586 CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
            LF+ +   +GL P +EH++CMVDL  RAG L EA + + + P     ++   L+   + 
Sbjct: 453 RLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQK 512

Query: 646 MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
             N   S    K LL+LEP ++G++++ S +YA     D++A++R  M    +SK  GCS
Sbjct: 513 RKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCS 572

Query: 706 WIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           WI+I+S+LH F A    H E  EI+  LDLL D+++
Sbjct: 573 WIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLR 608



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 221/475 (46%), Gaps = 19/475 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           +K  + +HA LL     N   + N+ +   A       A   F  +L  +  ++  +I+G
Sbjct: 45  IKQLKQIHAQLLT----NSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRG 100

Query: 134 YLDDGDYESVLGIACDMYRSEEKF-----NEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
                +  S   +A + Y S  KF     N  T   +  ACS L     G   H   I+ 
Sbjct: 101 LSTAWNKSS---LALEFY-SRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G + +  V  SLI+MY   G   +A  VF  ++ KD+   N MI  Y+K   +  A  +F
Sbjct: 157 GLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLF 216

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             ++ + F+PN+ +  +V+  C E   ++ G  +    V+  +     +G+A++ MYGK 
Sbjct: 217 REMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKC 276

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A R+FD++ +++ ++W A+I+GY ++G   +AI  F +        D   L  ++
Sbjct: 277 GDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGIL 336

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+    L+LG Q+  +A + G+  DV +GTALVD+YAK G L +A  +  G   K   
Sbjct: 337 SACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEV 396

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAG--MEPDPVTFSRLLSLSASQACLVRGRSL 486
            +NA++S          ++ + LF      G  + P+ +TF  +LS       +  GR L
Sbjct: 397 SWNAMISAL--AFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRL 454

Query: 487 -HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSA 539
            H  S   G    +   + ++ ++++ G ++ A+     + ++ D V   A+L A
Sbjct: 455 FHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGA 509



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 133/246 (54%), Gaps = 3/246 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDLKLG  V  F++++    + F  + LI++Y K   L  A+++FD M  +  +TW ++I
Sbjct: 242 GDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMI 301

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G  E  + +  DM  S    ++ T   IL AC+ +     G+Q+  +A + GF+
Sbjct: 302 TGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQ 361

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++V+VGT+L+ MY   G    A  VF G+  K+    N MI      G+++ A  +F  +
Sbjct: 362 DDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSM 421

Query: 252 LSS--DFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGKH 308
           ++      PND TF  V+S C     V+EG++L H ++  FG+V +I   + +V ++ + 
Sbjct: 422 MNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRA 481

Query: 309 GMSEEA 314
           G  EEA
Sbjct: 482 GHLEEA 487


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 195/654 (29%), Positives = 340/654 (51%), Gaps = 3/654 (0%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM- 150
           D  EANN + +  K N L  A+ LFD +  R  ++WT++I GY++  D    L +   M 
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
            +SE + +    S+ L+ C L  + ++G  +H F++K G  N+VFVG++L+ MY   G  
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
             +  VF  +  ++      +I    +AG SE     F  +  S  E + Y +   +   
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
            ++  +  G+ +H   +K G      V N++ TMY K G  +     F  +   +++SWT
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
            +++ Y++ G     +  F       +  +    + VI  C+  + L+ G QLH   +  
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCV 347

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G+++ + +  +++ +Y+K G+L S   +      +    ++ I++ +  ++   EE    
Sbjct: 348 GFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAY-SQVGYGEEAFEY 406

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           L S+ R  G +P+    + +LS+  S A L +G+ LHA+ +  G     +V +ALI MYA
Sbjct: 407 L-SRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYA 465

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCGSI  A +IF      DI+SW AM+S YA HG  + A+ LFE +++ G  PD ++ +G
Sbjct: 466 KCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIG 525

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC ++G+ + G   FN + + Y + P  EH+ CM+DLL RAGRL +A  LI S P  
Sbjct: 526 VLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQ 585

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
              ++W TL+   ++  +      A+  +L L+P  AG+ I ++N++A +G   EAA +R
Sbjct: 586 WDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIR 645

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKV 744
             M    + KE G S +++   +  FV+  + HP+ E+IY+ L+ L   M++ +
Sbjct: 646 MLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGMEIYI 699



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 232/479 (48%), Gaps = 22/479 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +H F +K G  N  F  + L+++Y K   +  + K+FD M  R+A+TWT++I G + 
Sbjct: 135 GTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVR 194

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G  E+ L     M RS+ +++ +  ++ L+A +       G  IH   +K GF+ N FV
Sbjct: 195 AGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFV 254

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL +MY   G      + FR +   DV     ++  Y + G+ +     F  + +S+ 
Sbjct: 255 ANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNV 314

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN+YTF+ VIS C     ++ G+QLH   +  G V  +SV N+I+T+Y K G      +
Sbjct: 315 IPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F ++  R++I+W+ +I+ Y + G+G +A          G   +   LA+V+  C   + 
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA-RMLLDGFSCKYTAEFNAILS 435
           LE G QLH   +  G      + +AL+ +YAK G +  A ++ +D +     + + A++S
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIIS-WTAMIS 493

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV---------RGRSL 486
           G+ E      ++ + LF   +  G+ PD VTF  +L+ + S A +V           +  
Sbjct: 494 GYAEH--GHSQEAIELFENIQKVGLRPDSVTFIGVLT-ACSHAGMVDLGFYYFNSMSKDY 550

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHG 544
           H    K  Y         +I +  + G +  A  + + +  + D V W+ +L A  +HG
Sbjct: 551 HITPSKEHYG-------CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 177/363 (48%), Gaps = 1/363 (0%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K S  SG L  G+++H   LK G   ++F AN+L  +Y K  +LD     F  M     
Sbjct: 224 LKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDV 283

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WT+++  Y+  G  +  L     M  S    NE+T S ++  C+      +GEQ+HA 
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAH 343

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +  GF N + V  S++++Y   G       VF  + ++D+   + +I  Y++ G  E A
Sbjct: 344 VLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEA 403

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F     + S   +PN++   +V+SVC     +E+GKQLH   +  G+ +   V +A++ M
Sbjct: 404 FEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIM 463

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G   EA ++F    + ++ISWTA+ISGY   GH  +AI  F     +G+  DS   
Sbjct: 464 YAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYAKGGDLKSARMLLDGFS 423
             V+  CS    ++LG        K  +++  +     ++D+  + G L  A  L+    
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583

Query: 424 CKY 426
            ++
Sbjct: 584 IQW 586


>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 214/714 (29%), Positives = 364/714 (50%), Gaps = 41/714 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV-AQKLFDGMLVRSAITWTSL 130
           GDL  G+ VH +++KSG   DT   N L+++YAK   +   A  +FD +  +  ++W ++
Sbjct: 160 GDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAM 219

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI---FGEQIHAFAIK 187
           I G  ++   E    +   M +   + N  T + IL  C+  +  +    G QIH++ ++
Sbjct: 220 IAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQ 279

Query: 188 -SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
                 +V V  +LIS+Y   G  REAE +F  +  +D+   N  I  Y   GE   A H
Sbjct: 280 WPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALH 339

Query: 247 VFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTM 304
           +F +L S +   P+  T  +++  C +   ++ GKQ+H    +   +  + +VGNA+V+ 
Sbjct: 340 LFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSF 399

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G +EEA   F  IS ++LISW ++   +    H  + ++     L L I  DS  +
Sbjct: 400 YAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTI 459

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYL---SDVRLGTALVDIYAKGGDLKSARMLLDG 421
             +I  C+    +E   ++H ++I+ G L   +   +G A++D Y+K G+++ A  +   
Sbjct: 460 LAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQN 519

Query: 422 FSCKYT-AEFNAILSGF--------------------------MEKI---ADDEEDVMVL 451
            S K      N+++SG+                          M ++    D  E  + L
Sbjct: 520 LSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGL 579

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
             + +  GM+PD VT   LL +    A +        Y I++ +  D+ +  AL+  YAK
Sbjct: 580 CHELQARGMKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCFK-DLHLEAALLDAYAK 638

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           CG I  A++IF+  +++D+V + AM+  YA+HG+ + AL +F  M + G  PD I    +
Sbjct: 639 CGIIGRAYKIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSI 698

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
           L AC ++G  + G+ +F  IE+++G++P +E +AC+VDLL R GR+SEA +L+ S P   
Sbjct: 699 LSACSHAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTSLPIEA 758

Query: 632 SPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
           +  LW TL+   K     +   + + +L  +E  D G++I++SN+YA     D   +VR 
Sbjct: 759 NANLWGTLLGACKTHHEVELGRIVANQLFKIEANDIGNYIVLSNLYAADARWDGVMEVRR 818

Query: 692 TMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVK 745
            M +  L K AGCSWIE++   + FVA    HP+   IYS L  L+ ++K  V+
Sbjct: 819 MMRNKDLKKPAGCSWIEVERTNNIFVAGDCSHPQRSIIYSTLQTLDRQVKEPVE 872



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 159/544 (29%), Positives = 264/544 (48%), Gaps = 46/544 (8%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           LG+ +H +++K G  +       L+N+YAK   L    KLFD +     + W  ++ G+ 
Sbjct: 61  LGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120

Query: 136 DDGDYES-VLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
                ++ V+ +   M+ S E   N  T + +L  C+ L D   G+ +H + IKSGF+ +
Sbjct: 121 GSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQD 180

Query: 194 VFVGTSLISMYFHSGCF-REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
              G +L+SMY   G    +A  VF  +AYKDV   N MI    +    E AF +F  ++
Sbjct: 181 TLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMV 240

Query: 253 SSDFEPNDYTFTNVISVCY---ENLGVEEGKQLHGLAVKFG-VVREISVGNAIVTMYGKH 308
                PN  T  N++ VC    +++    G+Q+H   +++  +  ++SV NA++++Y K 
Sbjct: 241 KGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKV 300

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATV 367
           G   EAE +F  +  R+L++W A I+GY  +G   KA++ F     L  +  DS  + ++
Sbjct: 301 GQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSI 360

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           +  C+   NL++G Q+H +  +H +L  D  +G ALV  YAK G  + A       S K 
Sbjct: 361 LPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFSMISMKD 420

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N+I   F EK        + L        + PD VT   ++ L AS   + + + +
Sbjct: 421 LISWNSIFDAFGEK--RHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEKVKEI 478

Query: 487 HAYSIKTG---YAADVIVGNALITMYAKCGSIDGA---FQ-------------------- 520
           H+YSI+TG         VGNA++  Y+KCG+++ A   FQ                    
Sbjct: 479 HSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVG 538

Query: 521 ---------IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
                    IF G+S+ D+ +WN M+  YA +   + AL L  E++  G  PD ++I+ +
Sbjct: 539 LGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGMKPDTVTIMSL 598

Query: 572 LQAC 575
           L  C
Sbjct: 599 LPVC 602



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 222/473 (46%), Gaps = 23/473 (4%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFN-EHTC-SVILEACSLLEDRI 176
           ML R   TW S+I     +  +   L +     +  E F  +HT  + IL++CS L    
Sbjct: 1   MLGRDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPN 60

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G  +H + +K G  +       L++MY   G   E   +F  L++ D    N ++  ++
Sbjct: 61  LGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120

Query: 237 KAGESEMAFHVFVHLLSSDFE--PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
            + + +        ++ S  E  PN  T   V+ VC     ++ GK +HG  +K G  ++
Sbjct: 121 GSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQD 180

Query: 295 ISVGNAIVTMYGKHGM-SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
              GNA+V+MY K G+ S +A  +FD I+ ++++SW A+I+G   +       + FL F 
Sbjct: 181 TLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAEN---RLVEDAFLLFS 237

Query: 354 DLGICCDSSCLATVIDGCSVCSNLE------LGLQLHGFAIKHGYLS-DVRLGTALVDIY 406
            +         ATV +   VC++ +       G Q+H + ++   LS DV +  AL+ +Y
Sbjct: 238 SMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLY 297

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME---PD 463
            K G ++ A  L      +    +NA ++G+      + E +  L     LA +E   PD
Sbjct: 298 LKVGQMREAEALFWTMDARDLVTWNAFIAGY----TSNGEWLKALHLFGNLASLETLLPD 353

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA-ADVIVGNALITMYAKCGSIDGAFQIF 522
            VT   +L   A    L  G+ +HAY  +  +   D  VGNAL++ YAKCG  + A+  F
Sbjct: 354 SVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTF 413

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             IS +D++SWN++  A+         L L   M +    PD ++IL +++ C
Sbjct: 414 SMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLC 466



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 8/134 (5%)

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
             +PD    + +L   ++      GR+LH Y +K G+ +  +    L+ MYAKCG +   
Sbjct: 38  AFKPDHTVLAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVEC 97

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGK---GALLLFEEM--KREGFAPDDISILGVLQ 573
            ++F  +S  D V WN +LS ++  G  K     + +F  M   RE   P+ +++  VL 
Sbjct: 98  LKLFDQLSHCDPVVWNIVLSGFS--GSNKCDADVMRVFRMMHSSREAL-PNSVTVATVLP 154

Query: 574 ACIYSGLSEGGICL 587
            C   G  + G C+
Sbjct: 155 VCARLGDLDAGKCV 168


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 197/682 (28%), Positives = 354/682 (51%), Gaps = 14/682 (2%)

Query: 76   LGQAVHAFLLKSG----------SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
            +G+AVH + +KSG            +D    + L+ +Y K   +  A+++FD M  +  +
Sbjct: 323  IGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNV 382

Query: 126  -TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
              W  ++ GY   G++E  L +   M+      +EH  S +L+  + L     G   H +
Sbjct: 383  HVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGY 442

Query: 185  AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
             +K GF     V  +LIS Y  S    +A  VF  +  +D    N +I   +  G +  A
Sbjct: 443  IVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEA 502

Query: 245  FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
              +F+ + +   E +  T  +V+  C ++     G+ +HG +VK G++ E S+ NA++ M
Sbjct: 503  IELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDM 562

Query: 305  YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
            Y      +   ++F ++ ++N++SWTA+I+ Y+R+G   K      E +  GI  D   +
Sbjct: 563  YSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAV 622

Query: 365  ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
             + +   +   +L+ G  +HG+ I++G    + +  AL+++Y K  +++ AR++ D  + 
Sbjct: 623  TSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTN 682

Query: 425  KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
            K    +N ++ G+      +E     LFS   L    P+ VT + +L  +AS + L RGR
Sbjct: 683  KDVISWNTLIGGYSRNNFPNES--FSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGR 739

Query: 485  SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
             +HAY+++ G+  D    NAL+ MY KCG++  A  +F  ++ ++++SW  M++ Y +HG
Sbjct: 740  EIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHG 799

Query: 545  LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
             GK A+ LFE+M+  G  PD  S   +L AC +SGL+  G   F  +++ Y + P L+H+
Sbjct: 800  FGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHY 859

Query: 605  ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
             C+VDLL R G L EA+  I S P      +W +L+   ++  N K +   + ++  LEP
Sbjct: 860  TCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEP 919

Query: 665  KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
            ++ G ++L++N+YA     +   K++  +    L +  G SWIE+ SK+H F+A  ++HP
Sbjct: 920  ENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHP 979

Query: 725  ESEEIYSKLDLLNDEMKLKVKD 746
            +   I   LD +   M+ +  D
Sbjct: 980  DWNRIAEFLDDVARRMRQEGHD 1001



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 255/515 (49%), Gaps = 16/515 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L  G+ +H  L K G       AN LI +Y++  R++ A ++FD M  R AI+W S+I
Sbjct: 218 GSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMI 277

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G   +G + + + +   M+    + +  T   +L AC+ L   + G+ +H +++KSG  
Sbjct: 278 GGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLL 337

Query: 192 ----------NNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGE 240
                     ++  +G+ L+ MY   G    A  VF  ++ K +V   N ++  Y K GE
Sbjct: 338 WGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGE 397

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGN 299
            E +  +FV +      P+++  + ++  C   L    +G   HG  VK G   + +V N
Sbjct: 398 FEESLSLFVQMHELGIAPDEHAISCLLK-CITCLSCARDGLVAHGYIVKLGFGAQCAVCN 456

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+++ Y K  M  +A  +F+ +  ++ ISW ++ISG   +G   +AI  F+     G   
Sbjct: 457 ALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQEL 516

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           DS  L +V+  C+       G  +HG+++K G + +  L  AL+D+Y+   D +S   + 
Sbjct: 517 DSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIF 576

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                K    + A+++ +M     D+  V  L  +  L G+ PD    +  L   A    
Sbjct: 577 RSMGQKNVVSWTAMITSYMRAGLFDK--VAGLLQEMVLDGIRPDVFAVTSALHAFAGDES 634

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L +G+S+H Y+I+ G    + V NAL+ MY KC +++ A  IF  ++++D++SWN ++  
Sbjct: 635 LKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGG 694

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           Y+ +     +  LF +M  + F P+ +++  +L A
Sbjct: 695 YSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPA 728



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 180/692 (26%), Positives = 304/692 (43%), Gaps = 47/692 (6%)

Query: 6   PA-NLLQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFND---- 60
           PA  +L+ P  +  S     K  P    S +   ++  LC    ++ + R LL +D    
Sbjct: 40  PAGRVLEAPTAAPSSWS--TKNPPSRALSSDVNLRIQRLCQAGDLAGALR-LLGSDGGVD 96

Query: 61  ---WPQLVKISIGSGDLKLGQAVHAFLLKSGSQ----NDTFEANNLINLYAKFNRLDVAQ 113
              +  +V++      L+  +  HA +  S +       +     L+  Y K   L  A+
Sbjct: 97  VRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEAR 156

Query: 114 KLFDGMLVRSA--ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
            +FDGM  ++A    WTSL+  Y   GD++  + +   M       + H  S +L+  S 
Sbjct: 157 TVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSS 216

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
           L     GE IH    K G      V  +LI++Y   G   +A  VF  +  +D    N M
Sbjct: 217 LGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSM 276

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFG 290
           I      G    A  +F  + S   E +  T  +V+  C   LG    GK +HG +VK G
Sbjct: 277 IGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPAC-AGLGYGLIGKAVHGYSVKSG 335

Query: 291 V----------VREISVGNAIVTMYGKHGMSEEAERMFDAISER-NLISWTALISGYVRS 339
           +          + + ++G+ +V MY K G    A R+FDA+S + N+  W  ++ GY + 
Sbjct: 336 LLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKV 395

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G   ++++ F++  +LGI  D   ++ ++   +  S    GL  HG+ +K G+ +   + 
Sbjct: 396 GEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVC 455

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            AL+  YAK   +  A ++ +    + T  +N+++SG      + E   + LF +    G
Sbjct: 456 NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSE--AIELFIRMWTQG 513

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
            E D VT   +L   A       GR +H YS+KTG   +  + NAL+ MY+ C       
Sbjct: 514 QELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTN 573

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA----- 574
           QIF+ +  +++VSW AM+++Y   GL      L +EM  +G  PD  ++   L A     
Sbjct: 574 QIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDE 633

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
            +  G S  G  + N +E+   L P+      ++++  +   + EA  LI     ++  +
Sbjct: 634 SLKQGKSVHGYTIRNGMEK---LLPVAN---ALMEMYVKCRNVEEA-RLIFDRVTNKDVI 686

Query: 635 LWRTLVS--VSKLMANSKFSILASKRLLDLEP 664
            W TL+         N  FS+  S  LL   P
Sbjct: 687 SWNTLIGGYSRNNFPNESFSLF-SDMLLQFRP 717


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 205/663 (30%), Positives = 347/663 (52%), Gaps = 4/663 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           + A L+  G   D      L + +     +   ++LF+ +       +  LI+G+ D+G 
Sbjct: 33  IQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGL 92

Query: 140 YESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
            +S + +   + +    + +  T +  + A S LED   G  +HA +I  G  +N+FVG+
Sbjct: 93  PKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGS 152

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +++ +YF       A  VF  +  +D    N MI  +++    E +  VFV +L      
Sbjct: 153 AIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSF 212

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +  T   V++   E      G  +  LA K G+  ++ V   ++++Y K G S +   +F
Sbjct: 213 DSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILF 272

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           D I + +LIS+ A+ISGY  +     A+  F E L  G   +SS L  +I      ++L+
Sbjct: 273 DQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQ 332

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
           L   +   ++K G +    + TAL  +Y +  +++ AR L D    K  A +NA++SG+ 
Sbjct: 333 LSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYT 392

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
           +    D    + LF Q+ +  + P+PVT + +LS  A    L  G+ +H         ++
Sbjct: 393 QNGLTDR--AISLF-QEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           V V  AL+ MYAKCGSI  A Q+F  + D+++V+WNAM++ Y LHG GK AL LF EM +
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS 618
            G  P  ++ L +L AC +SGL   G  +F+ +   YG +P+ EH+ACMVD+LGRAG+L+
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569

Query: 619 EAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
            A+  I   P    P +W  L+    +  N++ + +ASKRL  L+P++ G ++L+SN+Y+
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629

Query: 679 GQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLND 738
                 +AA VR  +   +L+K  GC+ IEID + + F +  + HP++  I+  L+ L  
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTG 689

Query: 739 EMK 741
           +M+
Sbjct: 690 KMR 692



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 231/473 (48%), Gaps = 5/473 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D ++G  +HA  +  G  ++ F  + +++LY KF R ++A+K+FD M  R  + W ++I 
Sbjct: 128 DERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMIS 187

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G+  +  +E  + +  DM      F+  T + +L A + L++   G  I   A K G  +
Sbjct: 188 GFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHS 247

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +V+V T LIS+Y   G   +   +F  +   D+   N MI  Y    E+E A  +F  LL
Sbjct: 248 DVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL 307

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +S    N  T   +I V      ++  + +  L++K G++ + SV  A+ T+Y +    +
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQ 367

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A ++FD   E++L SW A+ISGY ++G   +AI+ F E +   +  +   + +++  C+
Sbjct: 368 FARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACA 426

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               L +G  +HG        S+V + TALVD+YAK G +  AR L D    K    +NA
Sbjct: 427 QLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNA 486

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-HAYSI 491
           +++G+   +    ++ + LF +   +G+ P  VTF  +L   +    +  G  + H+ + 
Sbjct: 487 MITGY--GLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
             G+         ++ +  + G +  A +  + +  +     W A+L A  +H
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 2/228 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ + +    L+L + +    LK G       +  L  +Y + N +  A++LFD    +S
Sbjct: 321 LIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKS 380

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W ++I GY  +G  +  + +  +M   +   N  T + IL AC+ L     G+ +H 
Sbjct: 381 LASWNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHG 439

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
                  E+NV+V T+L+ MY   G   EA  +F  +  K+V   N MI  Y   G  + 
Sbjct: 440 LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKE 499

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFG 290
           A  +F  +L S   P   TF +++  C  +  V EG ++ H +A  +G
Sbjct: 500 ALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG 547



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           T+++  +  S L   LQ+    I HG   D+   T L   +   G +   R L +  S  
Sbjct: 19  TLLNNATTLSQL---LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKP 75

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               FN ++ GF +     +  + +    ++   + PD  T++  +S ++       G  
Sbjct: 76  DLFLFNVLIRGFSDN-GLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVL 134

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           LHA+SI  G A+++ VG+A++ +Y K    + A ++F  + +RD V WN M+S ++ +  
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQA 574
            + ++ +F +M   G + D  ++  VL A
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTA 223



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L +G+ VH  +     +++ + +  L+++YAK   +  A++LFD M+ ++ +TW ++I
Sbjct: 429 GALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMI 488

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI-HAFAIKSGF 190
            GY   G  +  L +  +M +S       T   IL ACS       G +I H+ A   GF
Sbjct: 489 TGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 191 E 191
           +
Sbjct: 549 Q 549


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 196/633 (30%), Positives = 327/633 (51%), Gaps = 67/633 (10%)

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR------------------------ 211
           I+   +HA  IKSGF N +F+   LI  Y   G                           
Sbjct: 37  IYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96

Query: 212 -------EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
                  EA+++FR +  +D    N M+  + +    E A   F  +    F  N+Y+F 
Sbjct: 97  TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           +V+S C     + +G Q+H L  K   + ++ +G+A+V MY K G   +A+R+FD + +R
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           N++SW +LI+ + ++G   +A++ F   L+  +  D   LA+VI  C+  S +++G ++H
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276

Query: 385 GFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF------ 437
           G  +K+  L +D+ L  A VD+YAK   +K AR + D    +      +++SG+      
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336

Query: 438 ------MEKIAD-----------------DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
                   K+A+                 + E+ + LF   +   + P   +F+ +L   
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396

Query: 475 ASQACLVRGRSLHAYSIKTGYA------ADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
           A  A L  G   H + +K G+        D+ VGN+LI MY KCG ++  + +F+ + +R
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D VSWNAM+  +A +G G  AL LF EM   G  PD I+++GVL AC ++G  E G   F
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
           + + + +G+ P+ +H+ CMVDLLGRAG L EA ++I   P     ++W +L++  K+  N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
                  +++LL++EP ++G ++L+SNMYA  G  ++   VR +M    ++K+ GCSWI+
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           I    H F+   K HP  ++I+S LD+L  EM+
Sbjct: 637 IQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 252/537 (46%), Gaps = 77/537 (14%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG-----Y 134
           VHA ++KSG  N+ F  N LI+ Y+K   L+  +++FD M  R+  TW S++ G     +
Sbjct: 42  VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101

Query: 135 LDDGD-------------YESVLGIACDMYRSEEKF-------------NEHTCSVILEA 168
           LD+ D             + S++       R EE               NE++ + +L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           CS L D   G Q+H+   KS F ++V++G++L+ MY   G   +A+ VF  +  ++V   
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N +I  + + G +  A  VF  +L S  EP++ T  +VIS C     ++ G+++HG  VK
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281

Query: 289 FGVVR-EISVGNAIVTMYGKHGMSEEAERMFDA--------------------------- 320
              +R +I + NA V MY K    +EA  +FD+                           
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341

Query: 321 ----ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
               ++ERN++SW ALI+GY ++G   +A++ F       +C      A ++  C+  + 
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401

Query: 377 LELGLQLHGFAIKHGYL------SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           L LG+Q H   +KHG+        D+ +G +L+D+Y K G ++   ++      +    +
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NA++ GF +    +E   + LF +   +G +PD +T   +LS       +  GR  H +S
Sbjct: 462 NAMIIGFAQNGYGNE--ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFS 517

Query: 491 IKT---GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
             T   G A        ++ +  + G ++ A  + + +    D V W ++L+A  +H
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 185/390 (47%), Gaps = 39/390 (10%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G  D+  G  VH+ + KS   +D +  + L+++Y+K   ++ AQ++FD M  R+ ++W S
Sbjct: 164 GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 223

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI  +  +G     L +   M  S  + +E T + ++ AC+ L     G+++H   +K+ 
Sbjct: 224 LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 283

Query: 190 ----------------------------FEN----NVFVGTSLISMYFHSGCFREAENVF 217
                                       F++    NV   TS+IS Y  +   + A  +F
Sbjct: 284 KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 343

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE----N 273
             +A ++V   N +I  Y + GE+E A  +F  L      P  Y+F N++  C +    +
Sbjct: 344 TKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELH 403

Query: 274 LGVEEGKQL--HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
           LG++    +  HG   + G   +I VGN+++ MY K G  EE   +F  + ER+ +SW A
Sbjct: 404 LGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNA 463

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           +I G+ ++G+G +A+  F E L+ G   D   +  V+  C     +E G        +  
Sbjct: 464 MIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDF 523

Query: 392 YLSDVRLG-TALVDIYAKGGDLKSARMLLD 420
            ++ +R   T +VD+  + G L+ A+ +++
Sbjct: 524 GVAPLRDHYTCMVDLLGRAGFLEEAKSMIE 553



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 46/217 (21%)

Query: 463 DPVTFSRLL-SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           D   F++LL S   S+   +  R +HA  IK+G++ ++ + N LI  Y+KCGS++   Q+
Sbjct: 18  DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77

Query: 522 -------------------------------FKGISDRDIVSWNAMLSAYALHGLGKGAL 550
                                          F+ + +RD  +WN+M+S +A H   + AL
Sbjct: 78  FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL---RPILEHF--- 604
             F  M +EGF  ++ S   VL AC  SGL++      N+  Q++ L    P L      
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSAC--SGLND-----MNKGVQVHSLIAKSPFLSDVYIG 190

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           + +VD+  + G +++A  + +      + + W +L++
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLIT 226


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 199/642 (30%), Positives = 341/642 (53%), Gaps = 12/642 (1%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  RS   W +L+K    +  +E VL     M+R EEK +  T  V L+AC  L +  +G
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60

Query: 179 EQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           E IH F  K     ++++VG+SLI MY   G   EA  +F  L   D+   + M+  + K
Sbjct: 61  EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120

Query: 238 AGESEMAFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
            G    A   F  + ++SD  P+  T   ++S C +      G+ +HG  ++ G   ++S
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           + N+++  Y K    +EA  +F  I+E+++ISW+ +I+ YV++G   +A+  F + +D G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
              + + +  V+  C+   +LE G + H  AI+ G  ++V++ TALVD+Y K    + A 
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300

Query: 417 MLLDGFSCKYTAEFNAILSGF----MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            +      K    + A++SGF    M   + +E  +M+L +  R     PD +   ++L 
Sbjct: 301 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR-----PDAILMVKVLG 355

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
             +    L + +  H+Y IK G+ ++  +G +L+ +Y++CGS+  A ++F GI+ +D V 
Sbjct: 356 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 415

Query: 533 WNAMLSAYALHGLGKGALLLFEEM-KREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           W ++++ Y +HG G  AL  F  M K     P++++ L +L AC ++GL   G+ +F  +
Sbjct: 416 WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 475

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
              Y L P LEH+A +VDLLGR G L  A+ +    PFS +P +  TL+   ++  N + 
Sbjct: 476 VNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEM 535

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
           +   +K+L +LE   AG ++L+SN+Y  +G  +   K+R ++    + K    S IEI  
Sbjct: 536 AETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRR 595

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFELQ 753
           K+H FVA  + HPE E +Y  L  L+  MK  +++   FE +
Sbjct: 596 KVHRFVADDELHPEKEPVYGLLKELDLHMKEDLENCVYFEYE 637



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 234/456 (51%), Gaps = 7/456 (1%)

Query: 73  DLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           ++  G+ +H F+ K  +  +D +  ++LI +Y K  R+  A ++FD +     +TW+S++
Sbjct: 56  EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 115

Query: 132 KGYLDDGD-YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            G+  +G  Y++V      +  S+   +  T   ++ AC+ L +   G  +H F I+ GF
Sbjct: 116 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 175

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            N++ +  SL++ Y  S  F+EA N+F+ +A KDV   + +I  Y + G +  A  VF  
Sbjct: 176 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 235

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++    EPN  T   V+  C     +E+G++ H LA++ G+  E+ V  A+V MY K   
Sbjct: 236 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 295

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF-LEFLDLGICCDSSCLATVID 369
            EEA  +F  I  ++++SW ALISG+  +G   ++I  F +  L+     D+  +  V+ 
Sbjct: 296 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 355

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS    LE     H + IK+G+ S+  +G +LV++Y++ G L +A  + +G + K T  
Sbjct: 356 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 415

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQ-RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           + ++++G+   I       +  F+   + + ++P+ VTF  +LS  +    +  G  +  
Sbjct: 416 WTSLITGY--GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 473

Query: 489 YSIKTGYAADVIVGNA-LITMYAKCGSIDGAFQIFK 523
             +     A  +   A L+ +  + G +D A +I K
Sbjct: 474 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 509



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 6/127 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+  +  H++++K G  ++ F   +L+ LY++   L  A K+F+G+ ++  + WTSLI
Sbjct: 361 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 420

Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACS---LLED--RIFGEQIHAFA 185
            GY   G     L     M +S E K NE T   IL ACS   L+ +  RIF   ++ + 
Sbjct: 421 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYR 480

Query: 186 IKSGFEN 192
           +    E+
Sbjct: 481 LAPNLEH 487


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 217/708 (30%), Positives = 356/708 (50%), Gaps = 66/708 (9%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N ++N YAK   L  A++LFD M  R   +W +L+ GY     +   L     M+RS + 
Sbjct: 75  NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDS 134

Query: 157 F-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY-------FHSG 208
             N  T   ++++C  L  R    Q+     K  F  +  V T+L+ M+       F S 
Sbjct: 135 LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASR 194

Query: 209 CFREAEN------------------------VFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            F + E                          F  +A +DV   N MI   +++G    A
Sbjct: 195 LFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREA 254

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             + V +       +  T+T+ ++ C     +  GKQLH   ++     +  V +A++ +
Sbjct: 255 LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  +EA+R+F+++ +RN +SWT LI G ++     K++  F +     +  D   L
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA--------- 415
           AT+I GC    +L LG QLH   +K G+   + +  +L+ +YAK GDL++A         
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434

Query: 416 ----------------------RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
                                 R   DG   +    +NA+L  +++  A  EED + ++S
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGA--EEDGLKMYS 492

Query: 454 QQ-RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
                  + PD VT+  L    A       G  +  +++K G   +V V NA ITMY+KC
Sbjct: 493 AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKC 552

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G I  A ++F  ++ +D+VSWNAM++ Y+ HG+GK A   F++M  +G  PD IS + VL
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
             C +SGL + G   F+ + +++G+ P LEHF+CMVDLLGRAG L+EA +LI+  P   +
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT 672

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
             +W  L+S  K+  N + + LA+K + +L+  D+GS++L++ +Y+  G  D++A+VR  
Sbjct: 673 AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKL 732

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           M D  + K  G SW+E+++K+H F A    HP+   I +KLD L +++
Sbjct: 733 MRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKI 780



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 184/397 (46%), Gaps = 34/397 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ +HA +++S  Q D + A+ LI LYAK      A+++F+ +  R++++WT LI G
Sbjct: 286 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 345

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            L    +   + +   M       ++   + ++  C    D   G Q+H+  +KSG    
Sbjct: 346 SLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA 405

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE------------- 240
           + V  SLIS+Y   G  + AE VF  ++ +D+     MI  Y++ G              
Sbjct: 406 IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDT 465

Query: 241 ------------------SEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQ 281
                              E    ++  +LS  D  P+  T+  +   C +    + G Q
Sbjct: 466 RNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQ 525

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           + G  VK G++  +SV NA +TMY K G   EA+++FD ++ ++++SW A+I+GY + G 
Sbjct: 526 IIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGM 585

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG-LQLHGFAIKHGYLSDVRLGT 400
           G +A   F + L  G   D      V+ GCS    ++ G L        HG    +   +
Sbjct: 586 GKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFS 645

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAILSG 436
            +VD+  + G L  A+ L+D    K TAE + A+LS 
Sbjct: 646 CMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 233/495 (47%), Gaps = 56/495 (11%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F  N+++  YAK   +D A + F+ M  R  ++W  +I      G     LG+  +M+R 
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
             + +  T +  L AC+ L    +G+Q+HA  I+S  + + +V ++LI +Y   G F+EA
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324

Query: 214 ENVFRGLAYKDVRCVNFMI---LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           + VF  L  ++      +I   L+Y    +S     +F  + +     + +    +IS C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKS---VELFNQMRAELMAIDQFALATLISGC 381

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
           +  + +  G+QLH L +K G  R I V N+++++Y K G  + AE +F ++SER+++SWT
Sbjct: 382 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 441

Query: 331 ALISGYVRSGHGGKAINGFLEFLD----------LG-----------------------I 357
           ++I+ Y + G+  KA   F + +D          LG                       +
Sbjct: 442 SMITAYSQIGNIIKA-REFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D     T+  GC+     +LG Q+ G  +K G + +V +  A + +Y+K G +  A+ 
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560

Query: 418 LLDGFSCKYTAEFNAILSGF----MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           L D  + K    +NA+++G+    M K A    D M+        G +PD +++  +LS 
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML------SKGAKPDYISYVAVLS- 613

Query: 474 SASQACLVRGRSLHAYSIKT---GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
             S + LV+   L+ + + T   G +  +   + ++ +  + G +  A  +   +  +  
Sbjct: 614 GCSHSGLVQEGKLY-FDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT 672

Query: 531 VS-WNAMLSAYALHG 544
              W A+LSA  +HG
Sbjct: 673 AEVWGALLSACKIHG 687



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 249/552 (45%), Gaps = 48/552 (8%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E NV     +++ Y   G   +AE +F  +  +DV   N ++  Y +A         FV 
Sbjct: 68  EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127

Query: 251 L-LSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +  S D  PN +TF  V+  C   LG  E   QL GL  KF    +  V  A+V M+ + 
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSC-GALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186

Query: 309 GMSEEAERMFDAI-------------------------------SERNLISWTALISGYV 337
           G  + A R+F  I                               +ER+++SW  +I+   
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           +SG   +A+   +E    G+  DS+   + +  C+   +L  G QLH   I+     D  
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           + +AL+++YAK G  K A+ + +    + +  +  ++ G ++     +   + LF+Q R 
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKS--VELFNQMRA 364

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
             M  D    + L+S   ++  L  GR LH+  +K+G+   ++V N+LI++YAKCG +  
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F  +S+RDIVSW +M++AY+  G    A   F+ M       + I+   +L A I 
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR----NAITWNAMLGAYIQ 480

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
            G  E G+ +++ +     + P    +  +       G       +I  +   ++ L+  
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT--VKAGLILN 538

Query: 638 TLVSVSKLMANSKFS-ILASKRLLD-LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
             V+ + +   SK   I  +++L D L  KD  S+  +   Y+  GM  +AAK   T +D
Sbjct: 539 VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAK---TFDD 595

Query: 696 LRLSKEAGCSWI 707
           + LSK A   +I
Sbjct: 596 M-LSKGAKPDYI 606



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 13/278 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +    GDL+  +    F+  S S+ D     ++I  Y++   +  A++ FDGM  R+
Sbjct: 412 LISLYAKCGDLQNAE----FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRN 467

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL-EACSLLEDRIFGEQIH 182
           AITW +++  Y+  G  E  L +   M   ++   +    V L   C+ +     G+QI 
Sbjct: 468 AITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQII 527

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
              +K+G   NV V  + I+MY   G   EA+ +F  L  KDV   N MI  Y++ G  +
Sbjct: 528 GHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGK 587

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG---- 298
            A   F  +LS   +P+  ++  V+S C  +  V+EGK    +  +   V  IS G    
Sbjct: 588 QAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTR---VHGISPGLEHF 644

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLIS-WTALISG 335
           + +V + G+ G   EA+ + D +  +     W AL+S 
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 60  DWPQLVKISIGSGDL---KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           DW   V +  G  D+   KLG  +    +K+G   +   AN  I +Y+K  R+  AQKLF
Sbjct: 503 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 562

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           D +  +  ++W ++I GY   G  +       DM     K +  +   +L  CS
Sbjct: 563 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS 616



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG-ISDRDIVSWN 534
           S+  L   R+LH   +  G A+ V + N L+  Y  CG++  A ++ +  I + ++++ N
Sbjct: 16  SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHN 75

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
            M++ YA  G    A  LF+ M R   A  +  + G  QA
Sbjct: 76  IMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQA 115



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 15/128 (11%)

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAAD-------------VIVGNALITMYAKCGSI 515
           RL+++  + A  ++   LHAY    G  +D             VI  N ++  YAK GS+
Sbjct: 29  RLVTVGLASAVFLQNTLLHAY-FSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSL 87

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA-PDDISILGVLQA 574
             A ++F  +  RD+ SWN ++S Y         L  F  M R G + P+  +   V+++
Sbjct: 88  SDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKS 147

Query: 575 CIYSGLSE 582
           C   G  E
Sbjct: 148 CGALGCRE 155


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 204/672 (30%), Positives = 352/672 (52%), Gaps = 10/672 (1%)

Query: 77  GQAVHAFLLKSGS-----QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G+ VH  LL S +       +T  +N+LI +Y +    D A+ +FDGML R+ ++W ++I
Sbjct: 59  GRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVI 118

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             +  +      +G+   M R     +E      + AC+ L D   G Q+HA AIKS   
Sbjct: 119 AAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNG 178

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            ++ V  +L++MY  SG   +   +F  +  KD+     +I    + G    A H+F  +
Sbjct: 179 GHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREM 238

Query: 252 LSSDFE-PNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           ++     PN++ F +V   C   +  +E G+Q+HGL VK+ + R    G ++  MY +  
Sbjct: 239 IAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCN 298

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             + A ++F  I   +L+SW +LI+ +   G   +A+  F E     +  D   +  ++ 
Sbjct: 299 KLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLC 358

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C  C  L  G  +H + +K G   DV +  +L+ +Y +  D  SA  +    + +    
Sbjct: 359 ACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVT 418

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N+IL+  ++      EDV  LF     +    D ++ + +LS SA        + +HAY
Sbjct: 419 WNSILTACVQH--RHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAY 476

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHGLGKG 548
           + K G  +D I+ NALI  YAKCGS+D A ++F+ + + RD+ SW++++  YA  G  K 
Sbjct: 477 AFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKE 536

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF  M+  G  P+ ++ +GVL AC   GL + G   ++ +E  YG+ P  EH +C++
Sbjct: 537 ALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVI 596

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLL RAGRLSEA   ++  PF    ++W TL++ S+   + +    A++ +L+++P  + 
Sbjct: 597 DLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSA 656

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++L+ N+YA  G  +E A+++  M    + K  G SWI++  +L  F+   + HPES+E
Sbjct: 657 AYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDE 716

Query: 729 IYSKLDLLNDEM 740
           +Y+ LDL+  EM
Sbjct: 717 MYTMLDLIGFEM 728


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 216/708 (30%), Positives = 357/708 (50%), Gaps = 66/708 (9%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N ++N YAK   L  A++LFD M  R   +W +L+ GY     +   L     M+RS + 
Sbjct: 75  NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDS 134

Query: 157 F-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY-------FHSG 208
             N  T   ++++C  L  R    Q+     K  F  +  V T+L+ M+       F S 
Sbjct: 135 LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASR 194

Query: 209 CFREAEN------------------------VFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            F + E                          F  +A +DV   N MI   +++G    A
Sbjct: 195 LFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREA 254

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             + V +       +  T+T+ ++ C     +  GKQLH   ++     +  V +A++ +
Sbjct: 255 LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  +EA+R+F+++ +RN +SWT LI G ++     K++  F +     +  D   L
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA--------- 415
           AT+I GC    +L LG QLH   +K G+   + +  +L+ +YAK GDL++A         
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434

Query: 416 ----------------------RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
                                 R   DG + +    +NA+L  +++  A  EED + ++S
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGA--EEDGLKMYS 492

Query: 454 QQ-RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
                  + PD VT+  L    A       G  +  +++K G   +V V NA ITMY+KC
Sbjct: 493 AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKC 552

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G I  A ++F  ++ +D+VSWNAM++ Y+ HG+GK A   F++M  +G  PD IS + VL
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
             C +SGL + G   F+ + +++G+ P LEHF+CMVDLLGRAG L+EA +LI+  P   +
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT 672

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
             +W  L+S  K+  N + + LA+K + +L+  D+GS++L++ +Y+  G  D++A+VR  
Sbjct: 673 AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKL 732

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           M D  + K  G SW+E+++K+H F A    HP+   I +K+D L +++
Sbjct: 733 MRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKI 780



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 184/397 (46%), Gaps = 34/397 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ +HA +++S  Q D + A+ LI LYAK      A+++F+ +  R++++WT LI G
Sbjct: 286 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 345

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            L    +   + +   M       ++   + ++  C    D   G Q+H+  +KSG    
Sbjct: 346 SLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA 405

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE------------- 240
           + V  SLIS+Y   G  + AE VF  ++ +D+     MI  Y++ G              
Sbjct: 406 IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMAT 465

Query: 241 ------------------SEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQ 281
                              E    ++  +LS  D  P+  T+  +   C +    + G Q
Sbjct: 466 RNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQ 525

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           + G  VK G++  +SV NA +TMY K G   EA+++FD ++ ++++SW A+I+GY + G 
Sbjct: 526 IIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGM 585

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG-LQLHGFAIKHGYLSDVRLGT 400
           G +A   F + L  G   D      V+ GCS    ++ G L        HG    +   +
Sbjct: 586 GKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFS 645

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAILSG 436
            +VD+  + G L  A+ L+D    K TAE + A+LS 
Sbjct: 646 CMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 232/498 (46%), Gaps = 62/498 (12%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F  N+++  YAK   +D A + F+ M  R  ++W  +I      G     LG+  +M+R 
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
             + +  T +  L AC+ L    +G+Q+HA  I+S  + + +V ++LI +Y   G F+EA
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324

Query: 214 ENVFRGLAYKDVRCVNFMI---LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           + VF  L  ++      +I   L+Y    +S     +F  + +     + +    +IS C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKS---VELFNQMRAELMAIDQFALATLISGC 381

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
           +  + +  G+QLH L +K G  R I V N+++++Y K G  + AE +F ++SER+++SWT
Sbjct: 382 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 441

Query: 331 ALISGYVRSGHGGKAINGFLEFLD-------------LG--------------------- 356
           ++I+ Y + G+  KA     EF D             LG                     
Sbjct: 442 SMITAYSQIGNIIKA----REFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 497

Query: 357 --ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             +  D     T+  GC+     +LG Q+ G  +K G + +V +  A + +Y+K G +  
Sbjct: 498 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 557

Query: 415 ARMLLDGFSCKYTAEFNAILSGF----MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
           A+ L D  + K    +NA+++G+    M K A    D M+        G +PD +++  +
Sbjct: 558 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML------SKGAKPDYISYVAV 611

Query: 471 LSLSASQACLVRGRSLHAYSIKT---GYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           LS   S + LV+   L+ + + T   G +  +   + ++ +  + G +  A  +   +  
Sbjct: 612 LS-GCSHSGLVQEGKLY-FDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPM 669

Query: 528 RDIVS-WNAMLSAYALHG 544
           +     W A+LSA  +HG
Sbjct: 670 KPTAEVWGALLSACKIHG 687



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 249/552 (45%), Gaps = 48/552 (8%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E NV     +++ Y   G   +AE +F  +  +DV   N ++  Y +A         FV 
Sbjct: 68  EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127

Query: 251 L-LSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +  S D  PN +TF  V+  C   LG  E   QL GL  KF    +  V  A+V M+ + 
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSC-GALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186

Query: 309 GMSEEAERMFDAI-------------------------------SERNLISWTALISGYV 337
           G  + A R+F  I                               +ER+++SW  +I+   
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           +SG   +A+   +E    G+  DS+   + +  C+   +L  G QLH   I+     D  
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           + +AL+++YAK G  K A+ + +    + +  +  ++ G ++     +   + LF+Q R 
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKS--VELFNQMRA 364

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
             M  D    + L+S   ++  L  GR LH+  +K+G+   ++V N+LI++YAKCG +  
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F  +S+RDIVSW +M++AY+  G    A   F+ M       + I+   +L A I 
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQ 480

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
            G  E G+ +++ +     + P    +  +       G       +I  +   ++ L+  
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT--VKAGLILN 538

Query: 638 TLVSVSKLMANSKFS-ILASKRLLD-LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
             V+ + +   SK   I  +++L D L  KD  S+  +   Y+  GM  +AAK   T +D
Sbjct: 539 VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAK---TFDD 595

Query: 696 LRLSKEAGCSWI 707
           + LSK A   +I
Sbjct: 596 M-LSKGAKPDYI 606



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 135/300 (45%), Gaps = 40/300 (13%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL-------------DV-------- 111
           DL LG+ +H+  LKSG       +N+LI+LYAK   L             D+        
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 112 ----------AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
                     A++ FDGM  R+AITW +++  Y+  G  E  L +   M   ++   +  
Sbjct: 446 AYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 162 CSVIL-EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
             V L   C+ +     G+QI    +K+G   NV V  + I+MY   G   EA+ +F  L
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             KDV   N MI  Y++ G  + A   F  +LS   +P+  ++  V+S C  +  V+EGK
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 281 QLHGLAVKFGVVREISVG----NAIVTMYGKHGMSEEAERMFDAISERNLIS-WTALISG 335
               +  +   V  IS G    + +V + G+ G   EA+ + D +  +     W AL+S 
Sbjct: 626 LYFDMMTR---VHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG-ISDRDIVSWN 534
           S+  L   R+LH   +  G A+ V + N L+  Y  CG++  A ++ +  I + ++++ N
Sbjct: 16  SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHN 75

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
            M++ YA  G    A  LF+ M R   A  +  + G  QA
Sbjct: 76  IMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQA 115



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 60  DWPQLVKISIGSGDL---KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           DW   V +  G  D+   KLG  +    +K+G   +   AN  I +Y+K  R+  AQKLF
Sbjct: 503 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 562

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           D +  +  ++W ++I GY   G  +       DM     K +  +   +L  CS
Sbjct: 563 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS 616



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 15/128 (11%)

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAAD-------------VIVGNALITMYAKCGSI 515
           RL+++  + A  ++   LHAY +  G  +D             VI  N ++  YAK GS+
Sbjct: 29  RLVTVGLASAVFLQNTLLHAY-LSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSL 87

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA-PDDISILGVLQA 574
             A ++F  +  RD+ SWN ++S Y         L  F  M R G + P+  +   V+++
Sbjct: 88  SDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKS 147

Query: 575 CIYSGLSE 582
           C   G  E
Sbjct: 148 CGALGCRE 155


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 202/671 (30%), Positives = 353/671 (52%), Gaps = 7/671 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  V + ++ SG QN    AN+LI ++    R+  A+KLFD M     I+  ++I  Y  
Sbjct: 164 GLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSH 223

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G       +  DM     + +  T   ++  C+  +    G  IH+  ++S  +++V V
Sbjct: 224 QGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTV 283

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L++MY  +G   +AE +F  ++ +D+   N MI  Y +   S  A      L  ++ 
Sbjct: 284 INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 343

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN  TF++ +  C     + +GK +H + ++  + R + VGN+++TMYGK    E+AE+
Sbjct: 344 IPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 403

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F ++   +++S+  LI GY     G KA+  F      GI  +   +  +    +  ++
Sbjct: 404 VFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSND 463

Query: 377 LE-LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           L   G  LH + I+ G+LSD  +  +L+ +YAK G+L+S+  + +  + K    +NAI++
Sbjct: 464 LHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIA 523

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
              +      E+ + LF   + AG + D V  +  LS  AS A L  G  LH   +K+G 
Sbjct: 524 ANAQ--LGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGL 581

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +D  V NA + MY KCG ++   Q+    + R    WN ++S YA +G  K A   F++
Sbjct: 582 DSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQ 641

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           M   G  PD ++ + +L AC ++GL + GI  +N +   +G+ P ++H  C+VDLLGR G
Sbjct: 642 MVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLG 701

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           R +EA   I   P   + L+WR+L+S S+   N +    A+K+LL+L+P D  +++L+SN
Sbjct: 702 RFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSN 761

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +YA      +  K+R+ M  + ++K   CSW+++ +++  F    + H  +E+IY+KL  
Sbjct: 762 LYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKL-- 819

Query: 736 LNDEMKLKVKD 746
             DEM LK+++
Sbjct: 820 --DEMLLKLRE 828



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 280/570 (49%), Gaps = 13/570 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G A+HA   ++G   + +    L++LY     +  A++LF  M  R+ ++WT+L+     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  E  L     M R     N +  + ++  C  LE+ + G Q+ +  I SG +N V V
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSV 182

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLI+M+ + G  ++AE +F  +   D    N MI  Y+  G     F VF  +     
Sbjct: 183 ANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+  T  +++SVC        G  +H L ++  +   ++V NA+V MY   G   +AE 
Sbjct: 243 RPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 302

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  +S R+LISW  +IS YV++ +   A+    +        +    ++ +  CS    
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGA 362

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G  +H   ++     ++ +G +L+ +Y K   ++ A  +           +N ++ G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGG 422

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYSIKTGY 495
           +   + +D    M +FS  R AG++P+ +T   +  S ++S      GR LHAY I+TG+
Sbjct: 423 Y--AVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGF 480

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +D  V N+LITMYAKCG+++ +  IF  I++++IVSWNA+++A A  G G+ AL LF +
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFID 540

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV----DLL 611
           M+  G   D + +   L +C      E G+ L        G++  L+  + +V    D+ 
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHG-----LGMKSGLDSDSYVVNAAMDMY 595

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           G+ G+++E + ++           W TL+S
Sbjct: 596 GKCGKMNEMLQMVPDQAIRPQQ-CWNTLIS 624



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 186/396 (46%), Gaps = 8/396 (2%)

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG----KQLHGLAVKFGVV 292
           + G    AF +   +       + +   ++++ C E  G +EG      +H L  + G++
Sbjct: 18  RCGRDVAAFELLRGMRERGVPLSGFALASLVTAC-ERRGRDEGIACGAAIHALTHRAGLM 76

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
             + +G A++ +YG  G+  +A R+F  + ERN++SWTAL+     +G+  + +  + + 
Sbjct: 77  GNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQM 136

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
              G+ C+++  ATV+  C    N   GLQ+    I  G  + V +  +L+ ++   G +
Sbjct: 137 RREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRV 196

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           + A  L D      T   NA++S +  +    +    ++FS  R  G+ PD  T   L+S
Sbjct: 197 QDAEKLFDRMEEHDTISRNAMISMYSHQGICSK--CFLVFSDMRHHGLRPDATTLCSLMS 254

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
           + AS      G  +H+  +++   + V V NAL+ MY+  G +  A  +F  +S RD++S
Sbjct: 255 VCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLIS 314

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           WN M+S+Y  +     AL    ++      P+ ++    L AC   G    G  +   + 
Sbjct: 315 WNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVL 374

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
           Q+   R +L   + ++ + G+   + +A  +  S P
Sbjct: 375 QLSLQRNLLVGNS-LITMYGKCNSMEDAEKVFQSMP 409


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 213/699 (30%), Positives = 360/699 (51%), Gaps = 29/699 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD--GMLV 121
           L+K+S  +G++ L + +H + +++G   D+      I +Y++   L+ AQ++FD   +L 
Sbjct: 127 LLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLA 186

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQ 180
              + W S+I  Y+  G +  VL + C M         E T + ++ AC    +  +G  
Sbjct: 187 LDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAM 246

Query: 181 IHAFAIKSGFE-NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +H   IK+G E  N++   SL++ Y   G  + A  +F  ++ KDV   N MI    + G
Sbjct: 247 VHGRIIKAGLEATNLW--NSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRG 304

Query: 240 ESEMAFHVFVHLLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           E E A  +F  +L  +   +PN  TF +++S       +  G+++H    +  +  + S+
Sbjct: 305 EGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSI 364

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N+++T Y K     +A  +F+ +  R++ISW ++++GY ++   G+  + F   +  GI
Sbjct: 365 TNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGI 424

Query: 358 CCDSSCLATVIDGCSVCSN----LELGLQLHGFAIKHGYLSDVRLGT--ALVDIYAKGGD 411
             DS  L  + +  S  S+       G ++HG+ ++      V L    A++ +YAK   
Sbjct: 425 EPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNR 484

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           +  A  +  G   + +  +NA++ G+        EDV+++F      G   D V+ S LL
Sbjct: 485 IADAEKIFKGMKNRDSYSWNAMMDGYSRNA--KFEDVLMIFLDILKQGFPLDHVSLSILL 542

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAAD-------VIVGNALITMYAKCGSIDGAFQIFKG 524
           +       L  G+  HA   K     D       + + NALI+MY+KCGSI  A Q+F  
Sbjct: 543 TSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLK 602

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           +  +D+ SW AM++  A HGL   AL LFE MK +G  P+ ++ L +L AC + GL + G
Sbjct: 603 MERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEG 662

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN-----SSPFSESPL-LWRT 638
              F+ +   YGL P +EH+ACM+DL GR+G+   A +L+        P+ +  L LW+ 
Sbjct: 663 SYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKV 722

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+            + A+ ++L+LEP+D  ++IL++N+YA  G+ ++A KVR  M D  L
Sbjct: 723 LLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGL 782

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
            KE GCSWI+  ++ H FVA    HP+ +EIY KL  LN
Sbjct: 783 RKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLN 821



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 239/483 (49%), Gaps = 14/483 (2%)

Query: 104 AKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCS 163
           ++  RL  AQ+LFD    R  I+W++LI  Y   G++    G+   M     + N  + +
Sbjct: 66  SEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLA 125

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF--RGLA 221
            +L+      +     Q+H ++I++GF  +  +  + I+MY   G   +A+ VF    L 
Sbjct: 126 SLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLL 185

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGK 280
             D+   N +I  Y   G       +F  ++S     P + T+ +V++ C  +   + G 
Sbjct: 186 ALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGA 245

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +HG  +K G +   ++ N++VT YGK G  + A ++F+ IS ++++SW A+I+   + G
Sbjct: 246 MVHGRIIKAG-LEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRG 304

Query: 341 HGGKAINGFLEFLDL--GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
            G  A+  F   L +   +  +     +++   S  S L  G ++H    +     D  +
Sbjct: 305 EGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSI 364

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
             +L+  Y+K  ++  AR + +    +    +N++L+G+ +   + +     +F +  L+
Sbjct: 365 TNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQN--EQQGRCFDIFKRMMLS 422

Query: 459 GMEPDPVTFSRLLSLSASQAC----LVRGRSLHAYSIK--TGYAADVIVGNALITMYAKC 512
           G+EPD  + + + + ++  +       RG+ +H Y ++  T     + V NA++ MYAK 
Sbjct: 423 GIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKF 482

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
             I  A +IFKG+ +RD  SWNAM+  Y+ +   +  L++F ++ ++GF  D +S+  +L
Sbjct: 483 NRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILL 542

Query: 573 QAC 575
            +C
Sbjct: 543 TSC 545



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 196/391 (50%), Gaps = 15/391 (3%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A+ +F     +DV   + +I  Y++ G    AF +F  ++    +PN ++  +++ V   
Sbjct: 74  AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS--ERNLISWT 330
              +   +QLHG +++ G   +  +  A +TMY + G+ E+A+R+FD  S    +++ W 
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSS-CLATVIDGCSVCSNLELGLQLHGFAIK 389
           ++I+ Y+  G   + +  F + + +G+   +    A+V++ C      + G  +HG  IK
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            G L    L  +LV  Y K G+L+ A  L +  S K    +NA+++   ++   + E+ +
Sbjct: 254 AG-LEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQR--GEGENAL 310

Query: 450 VLFSQQRLAGME----PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
            LF  +R+  +E    P+ VTF  LLS  +  + L  GR +HA+  +     D  + N+L
Sbjct: 311 GLF--RRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSL 368

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           IT Y+KC  +  A +IF+ +  RDI+SWN+ML+ Y  +        +F+ M   G  PD 
Sbjct: 369 ITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDS 428

Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
            S+  +  A   +     G+  F   ++I+G
Sbjct: 429 HSLTIIFNA---ASRDSSGLIYFRRGKEIHG 456



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 163/308 (52%), Gaps = 16/308 (5%)

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           Q HG + +F  +   S  +  +    +H   + A+++FD    R++ISW+ALI+ Y R G
Sbjct: 43  QNHGFSSQF--IFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCG 100

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL--QLHGFAIKHGYLSDVRL 398
           +  +A   F + +  G+  +   LA+++     CS  E+GL  QLHG++I+ G+  D  +
Sbjct: 101 NFAQAFGLFQKMMGEGLQPNGFSLASLLK--VSCSTGEIGLCRQLHGWSIRTGFGLDSGI 158

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKY--TAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
             A + +Y++ G L+ A+ + D  S        +N+I++ ++        +V+ LF +  
Sbjct: 159 RAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYI--FHGCWVEVLRLFCKMV 216

Query: 457 LAG-MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
             G + P  +T++ +++   S      G  +H   IK G  A  +  N+L+T Y KCG++
Sbjct: 217 SVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNL-WNSLVTFYGKCGNL 275

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR--EGFAPDDISILGVLQ 573
             A Q+F+ IS +D+VSWNAM++A    G G+ AL LF  M +      P+ ++ L +L 
Sbjct: 276 QHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLS 335

Query: 574 ACIYSGLS 581
           A   SGLS
Sbjct: 336 AV--SGLS 341


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 217/716 (30%), Positives = 360/716 (50%), Gaps = 43/716 (6%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           +D   L+++S+   D+ L +A+HA +LK G   DT   N +I  Y K   +  A ++F G
Sbjct: 105 DDLFNLLRLSVKYTDIDLARALHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMG 162

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M     +++++LI  +         + +   M  S  + NE++   IL AC    +   G
Sbjct: 163 MSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMG 222

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+HA AIK G+   VFV  +LI +Y   GC   A ++F  +  +D+   N MI    K 
Sbjct: 223 LQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKG 282

Query: 239 GESEMAFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
              E A  +F  L  +  F+ + +T + +++ C       +G+++H  A++ G+   +SV
Sbjct: 283 LSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSV 342

Query: 298 GNAIV-------------------------------TMYGKHGMSEEAERMFDAISERNL 326
            NAI+                               T Y + G+ + A  MF+ + E+N 
Sbjct: 343 SNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNS 402

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           +S+ AL++G+ ++  G KA+N F+  +  G       L  VI+ C +   LE+  Q+HGF
Sbjct: 403 VSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGF 462

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM----EKIA 442
            IK G+ S+  +  AL+D+ +K G +  A  +    S   T   N+I+   M     +  
Sbjct: 463 IIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLS---TDGGNSIIQTSMICGYARNG 519

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
             EE + + +  Q    M  D V F+ +L +  +      G+ +H  ++KTG+ A++ VG
Sbjct: 520 LPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVG 579

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
           N++I+MY+KC +ID A + F  +   D+VSWN +++   LH  G  AL ++  M++ G  
Sbjct: 580 NSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIK 639

Query: 563 PDDISILGVLQACIY--SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
           PD I+ + ++ A  +  S L +    LF  ++ I+ L P  EH+A +V +LG  G L EA
Sbjct: 640 PDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEA 699

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
             LIN  PF     +WR L+   +L AN+      +K ++ +EP+D  +++LVSN+YA  
Sbjct: 700 EELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSNLYAAS 759

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           G    +  VR  M D  L K    SW+ I  +LH F A  K HP+S +IYS LD+L
Sbjct: 760 GRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDIL 815


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 210/673 (31%), Positives = 363/673 (53%), Gaps = 16/673 (2%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           V  ++LKSG  +D +  + L++ +A+    D A+ +F  +  ++A+T   LI G +    
Sbjct: 297 VLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDF 356

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRI-FGEQIHAFAIKSGFEN-NV 194
            E  + I     R+    N  T  V+L A    S+ E+ +  G  +H   +++G  +  +
Sbjct: 357 SEEAVKIFVGT-RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKI 415

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            V   L++MY   G    A  +F+ +   D    N +I   ++ G  E A   +  +  S
Sbjct: 416 AVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQS 475

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              P+++   + +S C     +  G+Q+H  AVK+G+  + SV N +V MYG+ G   + 
Sbjct: 476 CISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDY 535

Query: 315 ERMFDAISERNLISWTALISGYVRSGHG--GKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            ++F++++E + +SW  ++ G + S      + +  F   +  G+  +      ++   S
Sbjct: 536 WKVFNSMAEHDEVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALS 594

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA-EFN 431
             S LELG Q+H   +KHG + D  +  AL+  YAK GD+ S   L    S +  A  +N
Sbjct: 595 PLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWN 654

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           +++SG++     + ++ M        +G   D  TFS +L+  AS A L RG  LHA+ I
Sbjct: 655 SMISGYIYN--GNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGI 712

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           ++   +DV+V +AL+ MY+KCG +D A ++F  ++ R+  SWN+M+S YA HGLG+ A+ 
Sbjct: 713 RSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIE 772

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           +FEEM R   +PD ++ + VL AC ++GL E G+  F E+   +G+ P +EH++C++DLL
Sbjct: 773 IFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYF-EMMPDHGILPQIEHYSCVIDLL 831

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSV---SKLMANSKFSILASKRLLDLEPKDAG 668
           GRAG++ +    I   P   + L+WRT++     SK  +N      AS+ LL++EP++  
Sbjct: 832 GRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPV 891

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++L SN +A  GM ++ AK RT M      KEAG SW+ ++  +H F+A  + HP ++E
Sbjct: 892 NYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKE 951

Query: 729 IYSKLDLLNDEMK 741
           IY KL+ L   ++
Sbjct: 952 IYEKLNFLIQNIR 964



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 255/521 (48%), Gaps = 21/521 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GD    + +H  L+K G  +D F  N+L+N YAK  RL  A ++FD M  R+A++WT L+
Sbjct: 75  GDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLV 134

Query: 132 KGYLDDGDYESVLGIACDMYRSEE---KFNEHTCSVILEACSL-LEDRI-FGEQIHAFAI 186
            GY+  G  E    +   M R  +   +    T   +L AC     DR+ F  Q+H    
Sbjct: 135 SGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVS 194

Query: 187 KSGFENNVFVGTSLISMYFHS--GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           K+ + +N  V  +LISMY     G    A+ VF G   +D+   N ++  Y K G+    
Sbjct: 195 KTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVAST 254

Query: 245 FHVFVHLLSSD----FEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGN 299
           F +F  +   D      P ++TF ++I+    + G      Q+    +K G   ++ VG+
Sbjct: 255 FTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGS 314

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL---EFLDLG 356
           A+V+ + +HG+++EA+ +F ++ ++N ++   LI G VR     +A+  F+     +D+ 
Sbjct: 315 ALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVN 374

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA--LVDIYAKGGDLKS 414
                  L+ + +       L +G  +HG  ++ G L+D+++  +  LV++YAK G ++S
Sbjct: 375 ADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTG-LTDLKIAVSNGLVNMYAKCGAIES 433

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A  +           +N I+S  +++  + EE VM  +S  R + + P        LS  
Sbjct: 434 ASKIFQLMEATDRISWNTIISA-LDQNGNCEEAVM-HYSLMRQSCISPSNFALISSLSSC 491

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           A    L  G+ +H  ++K G   D  V N L+ MY +CG++   +++F  +++ D VSWN
Sbjct: 492 AGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWN 551

Query: 535 AMLSAYALHGLGKGALL-LFEEMKREGFAPDDISILGVLQA 574
            M+   A        ++ +F  M R G  P+ ++ + +L A
Sbjct: 552 TMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAA 592


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/608 (31%), Positives = 323/608 (53%), Gaps = 43/608 (7%)

Query: 160 HTCSVILEACSLLED-RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF---REAEN 215
           H    +L  C  L+  RI    IHA  IK+G  N  +  + LI     S  F     A +
Sbjct: 3   HPSLSLLHNCKTLQSLRI----IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAIS 58

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +   ++   N M   +  + +   A +++V ++S    PN YTF  ++  C ++  
Sbjct: 59  VFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKA 118

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA--------------------- 314
             EG+Q+HG  +K G   ++ V  +++ MY K+G  E+A                     
Sbjct: 119 FREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKG 178

Query: 315 ----------ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
                     ++MFD I  ++++SW ALISGY  +G+  +A+  F E +   +  D S +
Sbjct: 179 YASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTM 238

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
            TV+  C+  +++ELG Q+H +   HG+ S++++  AL+D+Y K G++++A  L +G S 
Sbjct: 239 VTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY 298

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   A    +  GR
Sbjct: 299 KDVISWNTLIGGYTH--MNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGR 356

Query: 485 SLHAYSIK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
            +H Y  K   G +    +  +LI MYAKCG I+ A Q+F  + +R + SWNAM+  +A+
Sbjct: 357 WIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAM 416

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG    A  +F  M+++G  PDDI+ +G+L AC +SG+ + G  +F  + + Y + P LE
Sbjct: 417 HGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLE 476

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ CM+DLLG +G   EA  +INS       ++W +L+   K+  N +     ++ L+ +
Sbjct: 477 HYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKI 536

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EPK++GS++L+SN+YA  G  +E AK R  +ND  + K  GCS IEIDS +H F+   K 
Sbjct: 537 EPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKL 596

Query: 723 HPESEEIY 730
           HP + EIY
Sbjct: 597 HPRNREIY 604



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 239/507 (47%), Gaps = 44/507 (8%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLIN---LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + +HA ++K+G  N  +  + LI    L   F+ L  A  +FD +   + + W ++ +G+
Sbjct: 19  RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
               D  S L +   M       N +T   +L+AC+  +    G+QIH   +K G + ++
Sbjct: 79  ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138

Query: 195 FVGTSLISMYFHSGCFREAENVF---------------RGLA----------------YK 223
           +V TSLI+MY  +G   +A  VF               +G A                 K
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV   N +I  Y + G  + A  +F  ++ ++ +P++ T   V+S C ++  +E G+Q+H
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
                 G    + + NA++ +Y K G  E A  +F+ +S +++ISW  LI GY       
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTA 401
           +A+  F E L  G   +   + +++  C+    +++G  +H +  K   G  +   L T+
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGM 460
           L+D+YAK GD+++A+ + D    +  + +NA++ GF M   A+   D+   FS+ R  G+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDI---FSRMRKDGI 435

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGA 518
           EPD +TF  LLS  +    L  GR +   S+   Y     + +   +I +    G    A
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFR-SMTEDYKITPKLEHYGCMIDLLGHSGLFKEA 494

Query: 519 FQIFKGIS-DRDIVSWNAMLSAYALHG 544
            ++   +  D D V W ++L A  +HG
Sbjct: 495 EEMINSMEMDPDGVIWCSLLKACKMHG 521



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 162/356 (45%), Gaps = 33/356 (9%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD---------- 110
           +P L+K    S   + GQ +H  +LK G   D +   +LI +Y K  R +          
Sbjct: 106 FPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSS 165

Query: 111 ---------------------VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
                                 AQK+FD + V+  ++W +LI GY + G+Y+  L +  +
Sbjct: 166 HRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKE 225

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M ++  K +E T   +L AC+       G Q+H++    GF +N+ +  +LI +Y   G 
Sbjct: 226 MMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
              A  +F GL+YKDV   N +I  Y      + A  +F  +L S   PN+ T  +++  
Sbjct: 286 VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPA 345

Query: 270 CYENLGVEEGKQLHGLAVKF--GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
           C     ++ G+ +H    K   GV    S+  +++ MY K G  E A+++FD++  R+L 
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           SW A+I G+   G    A + F      GI  D      ++  CS    L+LG  +
Sbjct: 406 SWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 131/269 (48%), Gaps = 4/269 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  ++LG+ VH+++   G  ++    N LI+LY K   ++ A  LF+G+  +  I+W +L
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTL 307

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK--S 188
           I GY     Y+  L +  +M RS E  NE T   IL AC+ L     G  IH +  K   
Sbjct: 308 IGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 367

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  N   + TSLI MY   G    A+ VF  +  + +   N MI  +   G +  AF +F
Sbjct: 368 GVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIF 427

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGK 307
             +     EP+D TF  ++S C  +  ++ G+ +   +   + +  ++     ++ + G 
Sbjct: 428 SRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGH 487

Query: 308 HGMSEEAERMFDAIS-ERNLISWTALISG 335
            G+ +EAE M +++  + + + W +L+  
Sbjct: 488 SGLFKEAEEMINSMEMDPDGVIWCSLLKA 516


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 197/645 (30%), Positives = 344/645 (53%), Gaps = 3/645 (0%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N ++++  +F     A ++F  M  R   +W  ++ GY   G  E  L +   M  +  +
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVR 192

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            + +T   +L +C  + D   G ++HA  ++ GF   V V  +L++MY   G    A  V
Sbjct: 193 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKV 252

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  +A  D    N MI  + + GE      +F+ +L  + +PN  T T+V         +
Sbjct: 253 FDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDI 312

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
              K++HGLAVK G   +++  N+++ MY   GM  +A  +F  +  R+ +SWTA+ISGY
Sbjct: 313 TFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGY 372

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            ++G   KA+  +       +  D   +A+ +  C+   +L++G++LH  A   G++S V
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYV 432

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  AL+++YAK   +  A  +      K    ++++++GF     + E    + + +  
Sbjct: 433 VVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEA---LYYFRHM 489

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           LA ++P+ VTF   L+  A+   L  G+ +HA+ ++ G A +  + NALI +Y KCG   
Sbjct: 490 LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTG 549

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A+  F     +D+VSWN M++ +  HG G+ AL  F +M + G  PD+++ + +L AC 
Sbjct: 550 YAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACS 609

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
             G+   G  LF+ +   Y + P L+H+ACMVDLL R G+L+EA N IN  P +    +W
Sbjct: 610 RGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVW 669

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             L++  ++  + +   LA+K +L+LEP DAG  +L+ ++YA  G+ D+ A+VR TM + 
Sbjct: 670 GALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREK 729

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            L  ++GCSW+E+   +H F+   + HP+  EI + L+ + + MK
Sbjct: 730 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMK 774



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 196/392 (50%), Gaps = 17/392 (4%)

Query: 166 LEACSLLEDRIFGEQIHA-FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           L AC+  +DR      HA F ++        +G +++SM    G    A  VF  +  +D
Sbjct: 114 LRACAHADDR------HAWFGLR--------LGNAMLSMLVRFGETWHAWRVFAKMPERD 159

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V   N M+  Y KAG  E A  ++  ++ +   P+ YTF  V+  C        G+++H 
Sbjct: 160 VFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHA 219

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             ++FG   E+ V NA++TMY K G    A ++FD+++  + ISW A+I+G+  +G    
Sbjct: 220 HVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNA 279

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
            +  FL  L   +  +   + +V     + S++    ++HG A+K G+ +DV    +L+ 
Sbjct: 280 GLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQ 339

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +YA  G +  AR +      +    + A++SG+ +    D+   + +++   +  + PD 
Sbjct: 340 MYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDK--ALEVYALMEVNNVSPDD 397

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           +T +  L+  A    L  G  LH  +   G+ + V+V NAL+ MYAK   ID A ++FK 
Sbjct: 398 ITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKC 457

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           + ++D+VSW++M++ +  +     AL  F  M
Sbjct: 458 MPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM 489



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 227/484 (46%), Gaps = 5/484 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++   G  D ++G+ VHA +L+ G   +    N L+ +YAK   +  A+K+FD M V
Sbjct: 199 PCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAV 258

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              I+W ++I G+ ++G+  + L +   M + E + N  T + +  A  LL D  F +++
Sbjct: 259 MDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEM 318

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H  A+K GF  +V    SLI MY   G   +A  VF  +  +D      MI  Y K G  
Sbjct: 319 HGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFP 378

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  V+  +  ++  P+D T  + ++ C     ++ G +LH LA   G +  + V NA+
Sbjct: 379 DKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNAL 438

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K    ++A  +F  + E++++SW+++I+G+  +    +A+  F   L   +  +S
Sbjct: 439 LEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNS 497

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                 +  C+    L  G ++H   ++ G   +  L  AL+D+Y K G    A      
Sbjct: 498 VTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCA 557

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    +N +++GF+     + E  +  F+Q    G  PD VTF  LL   +    + 
Sbjct: 558 HGAKDVVSWNIMIAGFVAH--GNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVS 615

Query: 482 RGRSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
            G  L H+ + K     ++     ++ + ++ G +  A+     +    D   W A+L+ 
Sbjct: 616 EGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNG 675

Query: 540 YALH 543
             +H
Sbjct: 676 CRIH 679



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 192/392 (48%), Gaps = 5/392 (1%)

Query: 251 LLSSDFEPNDY-TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           LL S  EP D   +  +  +C     VE G +    A        + +GNA+++M  + G
Sbjct: 84  LLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFG 143

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            +  A R+F  + ER++ SW  ++ GY ++G   +A++ +   +  G+  D      V+ 
Sbjct: 144 ETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLR 203

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C    +  +G ++H   ++ G+  +V +  AL+ +YAK GD+ +AR + D  +      
Sbjct: 204 SCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCIS 263

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA+++G  E    +    + LF       ++P+ +T + +   S   + +   + +H  
Sbjct: 264 WNAMIAGHFEN--GECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGL 321

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           ++K G+A DV   N+LI MYA  G +  A  +F  +  RD +SW AM+S Y  +G    A
Sbjct: 322 AVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKA 381

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L ++  M+    +PDDI+I   L AC   G  + G+ L +E+ +  G    +     +++
Sbjct: 382 LEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKL-HELAESKGFMSYVVVTNALLE 440

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +  ++ R+ +A+ +    P  +  + W ++++
Sbjct: 441 MYAKSKRIDKAIEVFKCMP-EKDVVSWSSMIA 471


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 209/687 (30%), Positives = 350/687 (50%), Gaps = 4/687 (0%)

Query: 56   LLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKL 115
            L  N +  ++++      L+ G+ VH+ +  +G   +      L+ +Y     L   +++
Sbjct: 449  LDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRI 508

Query: 116  FDGMLVRSAI-TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED 174
            FD +L  + +  W  ++  Y   GDY   + +   M +     N +T S IL+  + L  
Sbjct: 509  FDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGR 568

Query: 175  RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
                ++IH    K GF +   V  SLI+ YF SG    A  +F  L  +DV   N MI  
Sbjct: 569  VGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISG 628

Query: 235  YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
                G S  A   FV +L      +  T  N ++ C     +  G+ LHG  VK    RE
Sbjct: 629  CVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSRE 688

Query: 295  ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
            +   N ++ MY K G   +A + F+ + ++ ++SWT+LI+ YVR G    AI  F E   
Sbjct: 689  VMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMES 748

Query: 355  LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             G+  D   + +V+  C+  ++L+ G  +H +  K+     + +  AL+D+YAK G ++ 
Sbjct: 749  KGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEE 808

Query: 415  ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            A ++      K    +N ++ G+ +    +E   + LF++ +     PD +T + LL   
Sbjct: 809  AYLVFSQIPVKDIVSWNTMIGGYSKNSLPNE--ALKLFAEMQKES-RPDGITMACLLPAC 865

Query: 475  ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
             S A L  GR +H   ++ GY++++ V NALI MY KCGS+  A  +F  I ++D+++W 
Sbjct: 866  GSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWT 925

Query: 535  AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
             M+S   +HGLG  A+  F++M+  G  PD+I+   +L AC +SGL   G   FN +   
Sbjct: 926  VMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISE 985

Query: 595  YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
              + P LEH+ACMVDLL R G LS+A NLI + P      +W  L+   ++  + + +  
Sbjct: 986  CNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEK 1045

Query: 655  ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
             ++ + +LEP +AG ++L++N+YA     +E  K+R  +    L K  GCSWIE+  K  
Sbjct: 1046 VAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFT 1105

Query: 715  HFVASGKDHPESEEIYSKLDLLNDEMK 741
             FV++   HP+++ I+S L+ L  +MK
Sbjct: 1106 TFVSADTAHPQAKSIFSLLNNLRIKMK 1132



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           E D   +S +L L A   CL  G+ +H+     G   + ++G  L+ MY  CG++    +
Sbjct: 448 ELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRR 507

Query: 521 IFKGI-SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           IF  I SD  +  WN M+S YA  G  + ++ LF++M++ G   +  +   +L+   ++ 
Sbjct: 508 IFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKC--FAT 565

Query: 580 LSEGGIC 586
           L   G C
Sbjct: 566 LGRVGEC 572


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 215/689 (31%), Positives = 363/689 (52%), Gaps = 16/689 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEA-NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           D  LG+ +H   +K G       A  +L+++Y K   +    ++F+GM  ++ +TWTSL+
Sbjct: 114 DRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLL 173

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G      +  V+ +   M       N  T + +L A +       G+++HA ++K G  
Sbjct: 174 TGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCR 233

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI--LEYNKAGESEM-AFHVF 248
           ++VFV  SL++MY   G   +A++VF  +  +D+   N ++  L+ N   E E+ A  +F
Sbjct: 234 SSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN---ECELEALQLF 290

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
               ++  +    T+  VI +C     +   +QLH   +K G     +V  A+   Y K 
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC 350

Query: 309 GMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
           G   +A  +F   +  RN++SWTA+ISG +++G    A+  F    +  +  +    + +
Sbjct: 351 GELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM 410

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +      S   L  Q+H   IK  Y     +GTAL+  Y+K G  + A  +      K  
Sbjct: 411 LKA----SLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDV 466

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSL 486
             ++A+LS   +  A D E    LF++  + G++P+  T S ++   A  +  V +GR  
Sbjct: 467 VAWSAMLSCHAQ--AGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQF 524

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HA SIK  Y   + V +AL++MY++ G+ID A  +F+  +DRD+VSWN+M+S YA HG  
Sbjct: 525 HAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYS 584

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             A+  F +M+  G   D ++ L V+  C ++GL   G   F+ + + + + P +EH+AC
Sbjct: 585 MKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYAC 644

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           MVDL  RAG+L E M+LI   PF    ++WRTL+   ++  N +    ++ +LL LEP D
Sbjct: 645 MVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHD 704

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
           + +++L+SN+YA  G   E  +VR  M+  ++ KEAGCSWI+I +K+H F+A  K HP S
Sbjct: 705 SSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMS 764

Query: 727 EEIYSKLDLLNDEMKLK-VKDSSAFELQD 754
           ++IY KL ++   +K      +++F L D
Sbjct: 765 DQIYKKLKVIITRLKQDGYSPNTSFVLHD 793



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 242/488 (49%), Gaps = 19/488 (3%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRG 219
           T S +L+AC  + DR+ GEQ+H   +K G +   V  GTSL+ MY   G   E   VF G
Sbjct: 101 TLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEG 160

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +  K+V     ++     A        +F  + +    PN +TF +V+S       ++ G
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           +++H  +VKFG    + V N+++ MY K G+ E+A+ +F+ +  R+++SW  L++G   +
Sbjct: 221 QRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN 280

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
               +A+  F E          S  ATVI  C+    L L  QLH   +KHG+     + 
Sbjct: 281 ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM 340

Query: 400 TALVDIYAKGGDLKSARMLLDGFS----CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           TAL D Y+K G+L  A   L+ FS     +    + AI+SG ++    D    +VLFS+ 
Sbjct: 341 TALADAYSKCGELADA---LNIFSMTTGSRNVVSWTAIISGCIQN--GDIPLAVVLFSRM 395

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           R   + P+  T+S +L  S S    +    +HA  IKT Y     VG AL+  Y+K GS 
Sbjct: 396 REDRVMPNEFTYSAMLKASLS----ILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGST 451

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           + A  IFK I  +D+V+W+AMLS +A  G  +GA  LF +M  +G  P++ +I  V+ AC
Sbjct: 452 EDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDAC 511

Query: 576 I--YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
               +G+ +G    F+ I   Y     +   + +V +  R G +  A  ++         
Sbjct: 512 ACPSAGVDQGR--QFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA-QIVFERQTDRDL 568

Query: 634 LLWRTLVS 641
           + W +++S
Sbjct: 569 VSWNSMIS 576



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 129/543 (23%), Positives = 259/543 (47%), Gaps = 23/543 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L LGQ VHA  +K G ++  F  N+L+N+YAK   ++ A+ +F+ M  R  ++W +L+
Sbjct: 215 GALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLM 274

Query: 132 KG-YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            G  L++ + E+ L +  +   +  K  + T + +++ C+ L+      Q+H+  +K GF
Sbjct: 275 AGLQLNECELEA-LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGF 333

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFR-GLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
                V T+L   Y   G   +A N+F      ++V     +I    + G+  +A  +F 
Sbjct: 334 HLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFS 393

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +      PN++T++ ++      L      Q+H   +K       SVG A++  Y K G
Sbjct: 394 RMREDRVMPNEFTYSAMLKASLSIL----PPQIHAQVIKTNYQHIPSVGTALLASYSKFG 449

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            +E+A  +F  I ++++++W+A++S + ++G    A   F +    GI  +   +++VID
Sbjct: 450 STEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVID 509

Query: 370 GCSVCS-NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            C+  S  ++ G Q H  +IK+ Y   + + +ALV +Y++ G++ SA+++ +  + +   
Sbjct: 510 ACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLV 569

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N+++SG+ +         +  F Q   +G++ D VTF  ++        +V G+    
Sbjct: 570 SWNSMISGYAQH--GYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFD 627

Query: 489 YSIKTGYAADVIVGNA-LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG-- 544
             ++       +   A ++ +Y++ G +D    + + +      + W  +L A  +H   
Sbjct: 628 SMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNV 687

Query: 545 -LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
            LGK     F   K     P D S   VL + IY+  + G     +E+ ++   R + + 
Sbjct: 688 ELGK-----FSADKLLSLEPHDSSTY-VLLSNIYA--AAGKWKERDEVRKLMDYRKVKKE 739

Query: 604 FAC 606
             C
Sbjct: 740 AGC 742



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 29/338 (8%)

Query: 318 FDAISERNL-ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            D I  R+  +    ++  Y R G   + ++ F      G+  DS+ L+ V+  C    +
Sbjct: 55  LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114

Query: 377 LELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
             LG QLH   +K G+   +V  GT+LVD+Y K G +     + +G   K    + ++L+
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G     A    +VM LF + R  G+ P+P TF+ +LS  ASQ  L  G+ +HA S+K G 
Sbjct: 175 GCAH--AQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGC 232

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            + V V N+L+ MYAKCG ++ A  +F  +  RD+VSWN +++   L+     AL LF E
Sbjct: 233 RSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE 292

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP----ILEH-------- 603
            +         + +G +    Y+ +    I L   ++Q+   R     +L+H        
Sbjct: 293 SR---------ATMGKMTQSTYATV----IKLCANLKQLALARQLHSCVLKHGFHLTGNV 339

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
              + D   + G L++A+N+ + +  S + + W  ++S
Sbjct: 340 MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377



 Score = 39.3 bits (90), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 13/108 (12%)

Query: 44  CSISSVSCSERTLLFNDW------PQLVKIS-------IGSGDLKLGQAVHAFLLKSGSQ 90
           C   +  C   T LFN        P    IS         S  +  G+  HA  +K    
Sbjct: 475 CHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYH 534

Query: 91  NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           +    ++ L+++Y++   +D AQ +F+    R  ++W S+I GY   G
Sbjct: 535 DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHG 582


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 188/663 (28%), Positives = 351/663 (52%), Gaps = 2/663 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK  + +   + K+G   + F    L++L+ ++  +D A ++F+ +  +  + + +++KG
Sbjct: 50  LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +    D +  L     M   + +   +  + +L+ C    +   G++IH   +KSGF  +
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +F  T L +MY       EA  VF  +  +D+   N ++  Y++ G + MA  +   +  
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            + +P+  T  +V+        +  GK++HG A++ G    +++  A+V MY K G  E 
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++FD + ERN++SW ++I  YV++ +  +A+  F + LD G+      +   +  C+ 
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +LE G  +H  +++ G   +V +  +L+ +Y K  ++ +A  +      +    +NA+
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + GF +       D +  FSQ R   ++PD  T+  +++  A  +     + +H   +++
Sbjct: 410 ILGFAQN--GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS 467

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
               +V V  AL+ MYAKCG+I  A  IF  +S+R + +WNAM+  Y  HG GK AL LF
Sbjct: 468 CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELF 527

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           EEM++    P+ ++ L V+ AC +SGL E G+  F  +++ Y +   ++H+  MVDLLGR
Sbjct: 528 EEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGR 587

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AGRL+EA + I   P   +  ++  ++   ++  N  F+  A++RL +L P D G  +L+
Sbjct: 588 AGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLL 647

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           +N+Y    M ++  +VR +M    L K  GCS +EI +++H F +    HP+S++IY+ L
Sbjct: 648 ANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFL 707

Query: 734 DLL 736
           + L
Sbjct: 708 EKL 710



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 215/416 (51%), Gaps = 5/416 (1%)

Query: 159 EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR 218
           EH  +++LE CS L++     QI     K+G     F  T L+S++   G   EA  VF 
Sbjct: 37  EHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            +  K     + M+  + K  + + A   FV +   D EP  Y FT ++ VC +   +  
Sbjct: 94  PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           GK++HGL VK G   ++     +  MY K     EA ++FD + ER+L+SW  +++GY +
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G    A+       +  +      + +V+   S    + +G ++HG+A++ G+ S V +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
            TALVD+YAK G L++AR L DG   +    +N+++  +++   ++ ++ M++F +    
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN--ENPKEAMLIFQKMLDE 331

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G++P  V+    L   A    L RGR +H  S++ G   +V V N+LI+MY KC  +D A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
             +F  +  R +VSWNAM+  +A +G    AL  F +M+     PD  + + V+ A
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 262/529 (49%), Gaps = 17/529 (3%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           ++  L+K+     +L++G+ +H  L+KSG   D F    L N+YAK  +++ A+K+FD M
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM 196

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             R  ++W +++ GY  +G     L +   M     K +  T   +L A S L     G+
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IH +A++SGF++ V + T+L+ MY   G    A  +F G+  ++V   N MI  Y +  
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             + A  +F  +L    +P D +    +  C +   +E G+ +H L+V+ G+ R +SV N
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           ++++MY K    + A  MF  +  R L+SW A+I G+ ++G    A+N F +     +  
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D+    +VI   +  S       +HG  ++     +V + TALVD+YAK G +  AR++ 
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D  S ++   +NA++ G+        +  + LF + +   ++P+ VTF  ++S + S + 
Sbjct: 497 DMMSERHVTTWNAMIDGY--GTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS-ACSHSG 553

Query: 480 LVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAM 536
           LV       Y +K  Y+ ++ + +  A++ +  + G ++ A+     +  +  V+ + AM
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613

Query: 537 LSAYALHG----LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           L A  +H       K A  LFE        PDD     VL A IY   S
Sbjct: 614 LGACQIHKNVNFAEKAAERLFE------LNPDD-GGYHVLLANIYRAAS 655



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 142/299 (47%), Gaps = 14/299 (4%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           CS+L+   Q+     K+G   +    T LV ++ + G +  A  + +    K    ++ +
Sbjct: 47  CSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTM 106

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           L GF +    D +  +  F + R   +EP    F+ LL +   +A L  G+ +H   +K+
Sbjct: 107 LKGFAK--VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G++ D+     L  MYAKC  ++ A ++F  + +RD+VSWN +++ Y+ +G+ + AL + 
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF----ACMVD 609
           + M  E   P  I+I+ VL A     L    I +  EI   Y +R   +        +VD
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRL----ISVGKEIHG-YAMRSGFDSLVNISTALVD 279

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD--LEPKD 666
           +  + G L  A  L +      + + W +++       N K ++L  +++LD  ++P D
Sbjct: 280 MYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 207/669 (30%), Positives = 350/669 (52%), Gaps = 23/669 (3%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F  N L+  Y +      A++L D M  R+A+++  LI  Y  +G     L       R+
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
               +  + +  L ACS       G  +HA AI  G  + VFV  SL+SMY   G   EA
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--Y 271
             VF     +D    N ++  Y +AG  E    VF  +       N +   +VI  C   
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
            +  ++  + +HG  +K G+  ++ + +A++ MY K G   EA  +F ++ E N++ +  
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 332 LISGYVRSGH------GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
           +I+G+ R+          +A+  + E    G+       ++V+  C++   LE G Q+HG
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE------FNAILSGFME 439
             IK+ +  D  +G+AL+D+Y   G ++      DGF C  ++       + A++SG ++
Sbjct: 344 QVIKYTFQEDDFIGSALIDLYFNSGCME------DGFRCFRSSPKHDIVTWTAMVSGCVQ 397

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
              +  E  + LF +   AG++PD  T S +++  AS A    G  +  ++ K+G+    
Sbjct: 398 N--ELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFT 455

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
           ++GN+ + MYA+ G +D A + F+ +   D+VSW+A++S +A HG  + AL  F+EM   
Sbjct: 456 VMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDA 515

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
              P++I+ LGVL AC + GL + G+  +  + + YGL P ++H  C+VDLLGRAGRL++
Sbjct: 516 KVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLAD 575

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
           A   I++S F   P++WR+L++  ++  + +   L + R+++LEP  + S++++ NMY  
Sbjct: 576 AEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLD 635

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLLND 738
            G L  A+K R  M    + KE G SWIE+   +H FVA  K HPES  IY+KL ++L+ 
Sbjct: 636 AGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSR 695

Query: 739 EMKLKVKDS 747
             KL   D+
Sbjct: 696 IEKLATTDT 704



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 242/500 (48%), Gaps = 13/500 (2%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+ G+AVHA  +  G  +  F +N+L+++Y+K   +  A+++FD    R  ++W SL
Sbjct: 122 AGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSL 181

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF--GEQIHAFAIKS 188
           + GY+  G  E ++ +   M R     N      +++ CS   D      E +H   IK+
Sbjct: 182 VSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKA 241

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE------SE 242
           G +++VF+ +++I MY   G   EA  +FR +   +V   N MI  + +         + 
Sbjct: 242 GLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  ++  + S   +P ++TF++V+  C     +E GKQ+HG  +K+    +  +G+A++
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +Y   G  E+  R F +  + ++++WTA++SG V++    KA++ F E L  G+  D  
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLF 421

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +++V++ C+  +    G Q+  FA K G+     +G + V +YA+ GD+ +A       
Sbjct: 422 TISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEM 481

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                  ++A++S   +       D +  F +   A + P+ +TF  +L+  +    +  
Sbjct: 482 ESHDVVSWSAVISCHAQHGC--ARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDE 539

Query: 483 G-RSLHAYSIKTGYAADVIVGNALITMYAKCGSI-DGAFQIFKGISDRDIVSWNAMLSAY 540
           G R     +   G +  +     ++ +  + G + D    I   I   D V W ++L++ 
Sbjct: 540 GLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASC 599

Query: 541 ALH-GLGKGALLLFEEMKRE 559
            +H  L +G L+    M+ E
Sbjct: 600 RIHRDLERGQLVANRIMELE 619



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 175/360 (48%), Gaps = 13/360 (3%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G G + + +AVH  ++K+G  +D F  + +I++YAK   L  A  LF  +   + + + +
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 130 LIKGYLDDGDYESVLGI-----ACDMYRSEE----KFNEHTCSVILEACSLLEDRIFGEQ 180
           +I G+      E+V+G      A  +Y   +    +  E T S +L AC+L     FG+Q
Sbjct: 284 MIAGFCRT---ETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   IK  F+ + F+G++LI +YF+SGC  +    FR     D+     M+    +   
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  +F   L +  +P+ +T ++V++ C        G+Q+   A K G  R   +GN+
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNS 460

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
            V MY + G  + A R F  +   +++SW+A+IS + + G    A++ F E +D  +  +
Sbjct: 461 CVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPN 520

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    ++ GL+ +    K +G    ++  T +VD+  + G L  A   +
Sbjct: 521 EITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFI 580


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 199/601 (33%), Positives = 316/601 (52%), Gaps = 42/601 (6%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E NVF   S+IS     G   E+  +F  +  KD    N MI  + +    E A   FV 
Sbjct: 87  ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +   DF  NDY+F + +S C     ++ G Q+HGL  K     ++ +G+ ++  Y K G+
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A R+FD + E+N++SW  LI+ Y ++G   +A+  F    +LG   D   LA+V+  
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSA 266

Query: 371 CSVCSNLELGLQLHGFAIKHG-YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC----- 424
           C+  +  + G+Q+H   +K   + +D+ LG ALVD+YAK G +  AR + D         
Sbjct: 267 CATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVS 326

Query: 425 --------------------------KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
                                     K    +NA+++G+ +    + E+ + LF   +  
Sbjct: 327 ETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQN--GENEEALGLFRMLKRE 384

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY------AADVIVGNALITMYAKC 512
            + P   TF  LL+ SA+ A L  GR  H++ +K G+        D+ VGN+LI MY KC
Sbjct: 385 SVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKC 444

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           GS++   ++F+ + ++D VSWN M+  YA +G G  AL LF++M   G  PD ++++G L
Sbjct: 445 GSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTL 504

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC ++GL E G   F  + + +GL P+ +H+ CMVDLLGRAG L EA +LI S P    
Sbjct: 505 CACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPD 564

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
            ++W +L+S  K+  N       ++++ +++P  +G ++L++NMY+  G   +A  VR  
Sbjct: 565 AVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKL 624

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSSAF 750
           M    + K+ GCSWI+I S +H F+   K HP+ +EIYS L LL   M+    V D+S  
Sbjct: 625 MRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPDASDH 684

Query: 751 E 751
           E
Sbjct: 685 E 685



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 136/539 (25%), Positives = 237/539 (43%), Gaps = 75/539 (13%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT---------- 126
            ++VH  L+++    + F  N LI++Y K   LD A+K+FD M  R+  +          
Sbjct: 43  ARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMR 102

Query: 127 ---------------------WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
                                W S+I G+     +E  L     M+R +   N+++    
Sbjct: 103 WGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSG 162

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L ACS L+D   G QIH    KS +  +VF+G+ LI  Y   G    A  VF G+  K+V
Sbjct: 163 LSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNV 222

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
              N +I  Y + G +  A   F  +    F+P++ T  +V+S C      +EG Q+H  
Sbjct: 223 VSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHAR 282

Query: 286 AVKFGVVR-EISVGNAIVTMYGKHGMSEEAERMFD------------------------- 319
            VK    R ++ +GNA+V MY K G   EA  +FD                         
Sbjct: 283 VVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKA 342

Query: 320 ------AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
                  I +++++SW ALI+GY ++G   +A+  F       +C        +++  + 
Sbjct: 343 ARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASAN 402

Query: 374 CSNLELGLQLHGFAIKHGYL------SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
            ++LELG Q H   +KHG+        D+ +G +L+D+Y K G ++    + +    K  
Sbjct: 403 LADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDH 462

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +N ++ G+ +     E   + LF +   +G +PD VT    L  + S A LV     +
Sbjct: 463 VSWNTMIIGYAQNGYGME--ALELFQKMLESGEKPDHVTMIGTLC-ACSHAGLVEEGRRY 519

Query: 488 AYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
            +S+   +    +  +   ++ +  + G ++ A  + + +  + D V W+++LSA  +H
Sbjct: 520 FFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVH 578



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 232/564 (41%), Gaps = 108/564 (19%)

Query: 68  SIGSG--------DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           S GSG        DLKLG  +H  + KS    D F  + LI+ Y+K   +  A+++FDGM
Sbjct: 158 SFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGM 217

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             ++ ++W  LI  Y  +G     L     M     K +E T + ++ AC+ L     G 
Sbjct: 218 EEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGV 277

Query: 180 QIHAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENV---------------------- 216
           QIHA  +KS  F N++ +G +L+ MY   G   EA  V                      
Sbjct: 278 QIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKS 337

Query: 217 ---------FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
                    F  +  KD+   N +I  Y + GE+E A  +F  L      P  YTF N++
Sbjct: 338 ASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLL 397

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVV------REISVGNAIVTMYGKHGMSEEAERMFDAI 321
           +       +E G+Q H   VK G         +I VGN+++ MY K G  EE  R+F+ +
Sbjct: 398 NASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM 457

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
            E++ +SW  +I GY ++G+G +A+  F + L+ G   D   +   +  CS    +E G 
Sbjct: 458 VEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGR 517

Query: 382 Q-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
           +       +HG L      T +VD+  + G L+ A+ L++                 M K
Sbjct: 518 RYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIES----------------MPK 561

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSLHAYSIKTGYAADV 499
                               +PD V +S LLS     AC V R  +L  Y  +  +  D 
Sbjct: 562 --------------------QPDAVVWSSLLS-----ACKVHRNITLGKYVAEKIFEIDP 596

Query: 500 IVGNA---LITMYAKCGSIDGAFQIFKGISDRDIV-----SW-------NAMLSAYALHG 544
                   L  MY++ G    A  + K +  R +V     SW       +  +     H 
Sbjct: 597 TSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHP 656

Query: 545 LGKGAL----LLFEEMKREGFAPD 564
             K       LL + M++ G+ PD
Sbjct: 657 QKKEIYSILKLLTKHMRQAGYVPD 680



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 169/382 (44%), Gaps = 65/382 (17%)

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           F  +   F  ++ +C +     + + +HG  ++     E+ + N ++ +YGK G  + A 
Sbjct: 20  FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79

Query: 316 RMFDAISERNLI-------------------------------SWTALISGYVRSGHGGK 344
           ++FD +SERN+                                SW ++I+G+ +     +
Sbjct: 80  KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A++ F+         +     + +  CS   +L+LG Q+HG   K  Y  DV +G+ L+D
Sbjct: 140 ALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLID 199

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
            Y+K G +  AR + DG   K    +N +++ + +     E   +  F +    G +PD 
Sbjct: 200 FYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIE--ALEAFGRMTELGFKPDE 257

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAADVIVGNALITMYAKCG---------- 513
           VT + ++S  A+ A    G  +HA  +K+  +  D+I+GNAL+ MYAKCG          
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317

Query: 514 ---------------------SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                                S+  A  +F  I  +DIVSWNA+++ Y  +G  + AL L
Sbjct: 318 RMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGL 377

Query: 553 FEEMKREGFAPDDISILGVLQA 574
           F  +KRE   P   +   +L A
Sbjct: 378 FRMLKRESVCPTHYTFGNLLNA 399



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 152/342 (44%), Gaps = 33/342 (9%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           DSS  A ++D C    +      +HG  I+  +  +V +   L+D+Y K G L  AR + 
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 420 DGFSCKYTAEFNAILS-----GFMEKIA------------------------DDEEDVMV 450
           D  S +    FN+I+S     GF+++ A                        D  E+ + 
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
            F +        +  +F   LS  +    L  G  +H    K+ Y+ DV +G+ LI  Y+
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG +  A ++F G+ ++++VSWN +++ Y  +G    AL  F  M   GF PD++++  
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP-- 628
           V+ AC      + G+ +   + +    R  L     +VD+  + GR++EA  + +  P  
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322

Query: 629 --FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
              SE+ ++     S S   A S F+ +  K ++      AG
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAG 364


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 193/627 (30%), Positives = 336/627 (53%), Gaps = 5/627 (0%)

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FD + +  A+ W  L+      GD+   +G+   M  S  + + +T S + ++ S L   
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             GEQ+H F +KSGF     VG SL++ Y  +     A  VF  +  +DV   N +I  Y
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
              G +E    VFV +L S  E +  T  +V + C ++  +  G+ +H + VK    RE 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
              N ++ MY K G  + A+ +F  +S+R+++S+T++I+GY R G  G+A+  F E  + 
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           GI  D   +  V++ C+    L+ G ++H +  ++    D+ +  AL+D+YAK G ++ A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM--VLFSQQRLAGMEPDPVTFSRLLSL 473
            ++      K    +N I+ G+ +    +E   +  +L  ++R +   PD  T + +L  
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS---PDERTVACVLPA 357

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            AS +   +GR +H Y ++ GY +D  V N+L+ MYAKCG++  A  +F  I+ +D+VSW
Sbjct: 358 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 417

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
             M++ Y +HG GK A+ LF +M++ G   D+IS + +L AC +SGL + G   FN +  
Sbjct: 418 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 477

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
              + P +EH+AC+VD+L R G L +A   I + P      +W  L+   ++  + K + 
Sbjct: 478 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 537

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
             ++++ +LEP++ G ++L++N+YA     ++  ++R  +    L K  GCSWIEI  ++
Sbjct: 538 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 597

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEM 740
           + FVA    +PE+E I + L  +   M
Sbjct: 598 NIFVAGDSSNPETENIEAFLRKVRARM 624



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 229/471 (48%), Gaps = 7/471 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +H F+LKSG        N+L+  Y K  R+D A+K+FD M  R  I+W S+I GY+ 
Sbjct: 63  GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 122

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  E  L +   M  S  + +  T   +   C+       G  +H+  +K+ F      
Sbjct: 123 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 182

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L+ MY   G    A+ VFR ++ + V     MI  Y + G +  A  +F  +     
Sbjct: 183 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 242

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ YT T V++ C     ++EGK++H    +  +  +I V NA++ MY K G  +EAE 
Sbjct: 243 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 302

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGF-LEFLDLGICCDSSCLATVIDGCSVCS 375
           +F  +  +++ISW  +I GY ++ +  +A++ F L   +     D   +A V+  C+  S
Sbjct: 303 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 362

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
             + G ++HG+ +++GY SD  +  +LVD+YAK G L  A ML D  + K    +  +++
Sbjct: 363 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 422

Query: 436 GF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKT 493
           G+ M       ++ + LF+Q R AG+E D ++F  LL   +    +  G R  +    + 
Sbjct: 423 GYGMHGFG---KEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 479

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
                V     ++ M A+ G +  A++  + +    D   W A+L    +H
Sbjct: 480 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 530



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 181/367 (49%), Gaps = 7/367 (1%)

Query: 60  DWPQLVKISIGSGD---LKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKL 115
           D   +V +  G  D   + LG+AVH+  +K+  S+ D F  N L+++Y+K   LD A+ +
Sbjct: 144 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF-CNTLLDMYSKCGDLDSAKAV 202

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           F  M  RS +++TS+I GY  +G     + +  +M       + +T + +L  C+     
Sbjct: 203 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 262

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G+++H +  ++    ++FV  +L+ MY   G  +EAE VF  +  KD+   N +I  Y
Sbjct: 263 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 322

Query: 236 NKAGESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
           +K   +  A  +F  LL    F P++ T   V+  C      ++G+++HG  ++ G   +
Sbjct: 323 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 382

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
             V N++V MY K G    A  +FD I+ ++L+SWT +I+GY   G G +AI  F +   
Sbjct: 383 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 442

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLK 413
            GI  D     +++  CS    ++ G +          +   V     +VD+ A+ GDL 
Sbjct: 443 AGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLI 502

Query: 414 SARMLLD 420
            A   ++
Sbjct: 503 KAYRFIE 509


>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 192/567 (33%), Positives = 319/567 (56%), Gaps = 10/567 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q H+  +  G   N  + T LI  Y        +  VF  L +K+V   N +I  Y K 
Sbjct: 43  RQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKN 102

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
                AF +F  + SSD  P+D+T + +  V  E   +  GK +HG +++ G V +  V 
Sbjct: 103 RLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVA 162

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG--KAINGFLEFLDLG 356
           N+I++MY K G  EE+ ++FD ++ RN  SW  LI+GY  SG+    +    F++ + + 
Sbjct: 163 NSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMD 222

Query: 357 -ICCDSSCLATVIDGCS-VCSNLELGLQLHGFAIKH----GYLSDVRLGTALVDIYAKGG 410
            +  D+  +++++  C       + G +LH + +K+    G  SDV LG  L+D+Y++  
Sbjct: 223 EVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSN 282

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
            +   R + D   C+    + A+++G++E   D +E + +    Q + G+EP+ V+   +
Sbjct: 283 KVVVGRRVFDRMKCRNVFSWTAMINGYVEN-GDSDEALSLFRDMQVIDGIEPNRVSLVSV 341

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRD 529
           L   +S + L+ GR +H ++++     +V + NALI MY+KCGS+D A ++F+  S  +D
Sbjct: 342 LPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKD 401

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
            +SW++M+S Y LHG G+ A+LL+++M + G  PD I+ +G+L AC  SGL   G+ +++
Sbjct: 402 AISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYS 461

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            +   YG+ P LE FAC+VD+LGRAG+L  A++ I + P    P +W  LVS S +  + 
Sbjct: 462 SVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDL 521

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +   LA + L+ LEP++  +++ +SN+YA     D  A+VR  M D RL K  GCSWI I
Sbjct: 522 EMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISI 581

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLL 736
           ++K H F  + K HP +  IY+ LD L
Sbjct: 582 NNKTHCFYVADKAHPSATSIYNMLDDL 608



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 243/495 (49%), Gaps = 16/495 (3%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           Q +  S+    LKL +  H+ +L  G   ++  A  LI  YA       ++ +FD +  +
Sbjct: 28  QSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHK 87

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           +   W SLI GY  +  Y     +   M  S+   ++ T S + +  S L     G+ IH
Sbjct: 88  NVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIH 147

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE-- 240
             +I+ GF ++  V  S++SMY   G F E+  VF  +  ++    N +I  Y  +G   
Sbjct: 148 GKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCN 207

Query: 241 -SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVK----FGVVRE 294
             E  +     +   +  P+ YT ++++ +C  + G  + G++LH   VK     G+  +
Sbjct: 208 FREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSD 267

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEF 352
           + +G  ++ MY +        R+FD +  RN+ SWTA+I+GYV +G   +A++ F  ++ 
Sbjct: 268 VHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQV 327

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
           +D GI  +   L +V+  CS  S L  G Q+HGFA++    ++V L  AL+D+Y+K G L
Sbjct: 328 ID-GIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSL 386

Query: 413 KSARMLLDGFS-CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
            SAR + +  S CK    +++++SG+   +    ++ ++L+ +   AG+ PD +T   +L
Sbjct: 387 DSARRVFEDDSLCKDAISWSSMISGY--GLHGKGQEAILLYDKMLQAGIRPDMITTVGIL 444

Query: 472 SLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           S  +    +  G ++++  I   G    + +   ++ M  + G +D A    K +     
Sbjct: 445 SACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPG 504

Query: 531 VS-WNAMLSAYALHG 544
            S W A++S   +HG
Sbjct: 505 PSVWGALVSCSIIHG 519



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)

Query: 453 SQQRLAGMEPDP-VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           S+   +  E DP +   + L  S +   L   R  H+  +  G + + ++   LI  YA 
Sbjct: 11  SRYYASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAI 70

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           C     +  +F  +  +++  WN++++ YA + L   A  LF +M      PDD ++
Sbjct: 71  CQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTL 127


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 215/689 (31%), Positives = 363/689 (52%), Gaps = 16/689 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEA-NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           D  LG+ +H   +K G       A  +L+++Y K   +    ++F+GM  ++ +TWTSL+
Sbjct: 114 DRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLL 173

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G      +  V+ +   M       N  T + +L A +       G+++HA ++K G  
Sbjct: 174 TGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCR 233

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI--LEYNKAGESEM-AFHVF 248
           ++VFV  SL++MY   G   +A++VF  +  +D+   N ++  L+ N   E E+ A  +F
Sbjct: 234 SSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN---ECELEALQLF 290

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
               ++  +    T+  VI +C     +   +QLH   +K G     +V  A+   Y K 
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC 350

Query: 309 GMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
           G   +A  +F   +  RN++SWTA+ISG +++G    A+  F    +  +  +    + +
Sbjct: 351 GELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM 410

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +      S   L  Q+H   IK  Y     +GTAL+  Y+K G  + A  +      K  
Sbjct: 411 LKA----SLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDV 466

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSL 486
             ++A+LS   +  A D E    LF++  + G++P+  T S ++   A  +  V +GR  
Sbjct: 467 VAWSAMLSCHAQ--AGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQF 524

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HA SIK  Y   + V +AL++MY++ G+ID A  +F+  +DRD+VSWN+M+S YA HG  
Sbjct: 525 HAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYS 584

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             A+  F +M+  G   D ++ L V+  C ++GL   G   F+ + + + + P +EH+AC
Sbjct: 585 MKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYAC 644

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           MVDL  RAG+L E M+LI   PF    ++WRTL+   ++  N +    ++ +LL LEP D
Sbjct: 645 MVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHD 704

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
           + +++L+SN+YA  G   E  +VR  M+  ++ KEAGCSWI+I +K+H F+A  K HP S
Sbjct: 705 SSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMS 764

Query: 727 EEIYSKLDLLNDEMKLK-VKDSSAFELQD 754
           ++IY KL ++   +K      +++F L D
Sbjct: 765 DQIYKKLKVIITRLKQDGYSPNTSFVLHD 793



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 242/488 (49%), Gaps = 19/488 (3%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRG 219
           T S +L+AC  + DR+ GEQ+H   +K G +   V  GTSL+ MY   G   E   VF G
Sbjct: 101 TLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEG 160

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +  K+V     ++     A        +F  + +    PN +TF +V+S       ++ G
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           +++H  +VKFG    + V N+++ MY K G+ E+A+ +F+ +  R+++SW  L++G   +
Sbjct: 221 QRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN 280

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
               +A+  F E          S  ATVI  C+    L L  QLH   +KHG+     + 
Sbjct: 281 ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM 340

Query: 400 TALVDIYAKGGDLKSARMLLDGFS----CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           TAL D Y+K G+L  A   L+ FS     +    + AI+SG ++    D    +VLFS+ 
Sbjct: 341 TALADAYSKCGELADA---LNIFSMTTGSRNVVSWTAIISGCIQN--GDIPLAVVLFSRM 395

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           R   + P+  T+S +L  S S    +    +HA  IKT Y     VG AL+  Y+K GS 
Sbjct: 396 REDRVMPNEFTYSAMLKASLS----ILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGST 451

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           + A  IFK I  +D+V+W+AMLS +A  G  +GA  LF +M  +G  P++ +I  V+ AC
Sbjct: 452 EDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDAC 511

Query: 576 I--YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
               +G+ +G    F+ I   Y     +   + +V +  R G +  A  ++         
Sbjct: 512 ACPSAGVDQGR--QFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA-QIVFERQTDRDL 568

Query: 634 LLWRTLVS 641
           + W +++S
Sbjct: 569 VSWNSMIS 576



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 258/543 (47%), Gaps = 23/543 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L LGQ VHA  +K G ++  F  N+L+N+YAK   ++ A+ +F+ M  R  ++W +L+
Sbjct: 215 GALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLM 274

Query: 132 KG-YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            G  L++ + E+ L +  +   +  K  + T + +++ C+ L+      Q+H+  +K GF
Sbjct: 275 AGLQLNECELEA-LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGF 333

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFR-GLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
                V T+L   Y   G   +A N+F      ++V     +I    + G+  +A  +F 
Sbjct: 334 HLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFS 393

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +      PN++T++ ++      L      Q+H   +K        VG A++  Y K G
Sbjct: 394 RMREDRVMPNEFTYSAMLKASLSIL----PPQIHAQVIKTNYQHIPFVGTALLASYSKFG 449

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            +E+A  +F  I ++++++W+A++S + ++G    A   F +    GI  +   +++VID
Sbjct: 450 STEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVID 509

Query: 370 GCSVCS-NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            C+  S  ++ G Q H  +IK+ Y   + + +ALV +Y++ G++ SA+++ +  + +   
Sbjct: 510 ACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLV 569

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N+++SG+ +         +  F Q   +G++ D VTF  ++        +V G+    
Sbjct: 570 SWNSMISGYAQH--GYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFD 627

Query: 489 YSIKTGYAADVIVGNA-LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG-- 544
             ++       +   A ++ +Y++ G +D    + + +      + W  +L A  +H   
Sbjct: 628 SMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNV 687

Query: 545 -LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
            LGK     F   K     P D S   VL + IY+  + G     +E+ ++   R + + 
Sbjct: 688 ELGK-----FSADKLLSLEPHDSSTY-VLLSNIYA--AAGKWKERDEVRKLMDYRKVKKE 739

Query: 604 FAC 606
             C
Sbjct: 740 AGC 742



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 29/338 (8%)

Query: 318 FDAISERNL-ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            D I  R+  +    ++  Y R G   + ++ F      G+  DS+ L+ V+  C    +
Sbjct: 55  LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114

Query: 377 LELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
             LG QLH   +K G+   +V  GT+LVD+Y K G +     + +G   K    + ++L+
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G     A    +VM LF + R  G+ P+P TF+ +LS  ASQ  L  G+ +HA S+K G 
Sbjct: 175 GCAH--AQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGC 232

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            + V V N+L+ MYAKCG ++ A  +F  +  RD+VSWN +++   L+     AL LF E
Sbjct: 233 RSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE 292

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP----ILEH-------- 603
            +         + +G +    Y+ +    I L   ++Q+   R     +L+H        
Sbjct: 293 SR---------ATMGKMTQSTYATV----IKLCANLKQLALARQLHSCVLKHGFHLTGNV 339

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
              + D   + G L++A+N+ + +  S + + W  ++S
Sbjct: 340 MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377



 Score = 39.3 bits (90), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 13/108 (12%)

Query: 44  CSISSVSCSERTLLFNDW------PQLVKIS-------IGSGDLKLGQAVHAFLLKSGSQ 90
           C   +  C   T LFN        P    IS         S  +  G+  HA  +K    
Sbjct: 475 CHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYH 534

Query: 91  NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           +    ++ L+++Y++   +D AQ +F+    R  ++W S+I GY   G
Sbjct: 535 DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHG 582


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 200/681 (29%), Positives = 347/681 (50%), Gaps = 13/681 (1%)

Query: 76  LGQAVHAFLLKSG---------SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI- 125
           +G+ VH + +KSG         S  D    + L+ +Y K   +  A+++FD M  +  + 
Sbjct: 317 VGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVH 376

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
            W  ++ GY    ++E  L +   M+      +EH  S +L+  + L     G   H + 
Sbjct: 377 VWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYL 436

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           +K GF     V  +LIS Y  S     A  VF  + ++D    N +I      G +  A 
Sbjct: 437 VKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAI 496

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +FV +     E +  T  +V+  C  +     G+ +HG +VK G++ E S+ NA++ MY
Sbjct: 497 ELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMY 556

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
                     ++F  ++++N++SWTA+I+ Y R+G   K      E +  GI  D   + 
Sbjct: 557 SNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVT 616

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +V+ G +   +L+ G  +HG+AI++G    + +  AL+++Y    +++ AR++ D  + K
Sbjct: 617 SVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNK 676

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N ++ G+      +E     LFS   L   +P+ VT + +L   AS + L RGR 
Sbjct: 677 DIISWNTLIGGYSRNNFANES--FSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGRE 733

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +HAY+++ G+  D    NAL+ MY KCG++  A  +F  ++ ++++SW  M++ Y +HG 
Sbjct: 734 IHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGC 793

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           GK A+ LFE+M+  G  PD  S   +L AC +SGL+  G   FN + + Y + P L+H+ 
Sbjct: 794 GKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYT 853

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           C+VDLL   G L EA   I S P      +W +L+   ++  + K +   + R+  LEP+
Sbjct: 854 CIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPE 913

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           + G ++L++N+YA     +   K++  +    L +  GCSWIE+  K+H F+A  ++HPE
Sbjct: 914 NTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPE 973

Query: 726 SEEIYSKLDLLNDEMKLKVKD 746
              I   LD +   M+ +  D
Sbjct: 974 WNRIAEFLDHVARRMREEGHD 994



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 254/514 (49%), Gaps = 15/514 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G +  G+ +H  L K G       AN LI LY++   ++ A ++FD M  R AI+W S I
Sbjct: 212 GSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTI 271

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G ++  + +   M+    + +  T   +L AC+ L   + G+ +H +++KSG  
Sbjct: 272 SGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLL 331

Query: 192 NNV---------FVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGES 241
            ++          +G+ L+ MY   G    A  VF  +  K +V   N ++  Y KA E 
Sbjct: 332 WDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEF 391

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNA 300
           E +  +F  +      P+++  + ++  C   L    +G   HG  VK G   + +V NA
Sbjct: 392 EESLLLFEQMHELGITPDEHALSCLLK-CITCLSCARDGLVAHGYLVKLGFGTQCAVCNA 450

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +++ Y K  M + A  +FD +  ++ ISW ++ISG   +G   +AI  F+     G   D
Sbjct: 451 LISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELD 510

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S+ L +V+  C+      +G  +HG+++K G + +  L  AL+D+Y+   D  S   +  
Sbjct: 511 STTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFR 570

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             + K    + A+++ +      D+  V  L  +  L G++PD    + +L   A    L
Sbjct: 571 NMAQKNVVSWTAMITSYTRAGLFDK--VAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESL 628

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            +G+S+H Y+I+ G    + V NAL+ MY  C +++ A  +F  ++++DI+SWN ++  Y
Sbjct: 629 KQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGY 688

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           + +     +  LF +M  + F P+ +++  +L A
Sbjct: 689 SRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPA 721



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 180/688 (26%), Positives = 309/688 (44%), Gaps = 45/688 (6%)

Query: 9   LLQPPFKS---QQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFND----- 60
           +L PP        +  P  +  P    S +   ++  LC    ++ + R LL +D     
Sbjct: 36  VLAPPAGQVIEAAAAAPSPRNPPSRVLSSDVNLRIQRLCQAGDLAAALR-LLGSDGGVGV 94

Query: 61  --WPQLVKISIGSGDLKLGQAVHAFLLKSGSQN--DTFEANNLINLYAKFNRLDVAQKLF 116
             +  +V++      L+  +  HA L+++G+     +     L+  Y K   L  A+ +F
Sbjct: 95  RSYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVF 153

Query: 117 DGMLVRSA--ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED 174
           D M  R A    WTSL+  Y   GD++  + +   M       + H  S +L+  + L  
Sbjct: 154 DEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGS 213

Query: 175 RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
              GE IH    K G      V  +LI++Y   GC  +A  VF  +  +D    N  I  
Sbjct: 214 ITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISG 273

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE-EGKQLHGLAVKFGVVR 293
           Y   G  + A  +F  + S   E +  T  +V+  C E LG E  GK +HG ++K G++ 
Sbjct: 274 YFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAE-LGFELVGKVVHGYSMKSGLLW 332

Query: 294 EI---------SVGNAIVTMYGKHGMSEEAERMFDAI-SERNLISWTALISGYVRSGHGG 343
           ++         ++G+ +V MY K G    A R+FDA+ S+ N+  W  ++ GY ++    
Sbjct: 333 DLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFE 392

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
           +++  F +  +LGI  D   L+ ++   +  S    GL  HG+ +K G+ +   +  AL+
Sbjct: 393 ESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALI 452

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
             YAK   + +A ++ D    + T  +N+++SG      + E   + LF +  + G E D
Sbjct: 453 SFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSE--AIELFVRMWMQGHELD 510

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
             T   +L   A       GR +H YS+KTG   +  + NAL+ MY+ C       QIF+
Sbjct: 511 STTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFR 570

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA-----CIYS 578
            ++ +++VSW AM+++Y   GL      L +EM  +G  PD  ++  VL        +  
Sbjct: 571 NMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQ 630

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           G S  G  + N +E+   L P+      ++++      + EA  L+     ++  + W T
Sbjct: 631 GKSVHGYAIRNGMEK---LLPVAN---ALMEMYVNCRNMEEA-RLVFDHVTNKDIISWNT 683

Query: 639 LVS--VSKLMANSKFSILASKRLLDLEP 664
           L+        AN  FS+  S  LL  +P
Sbjct: 684 LIGGYSRNNFANESFSLF-SDMLLQFKP 710



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 22/138 (15%)

Query: 32  FSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQN 91
           F PN  +    L +++S+S  ER                      G+ +HA+ L+ G   
Sbjct: 708 FKPNTVTMTCILPAVASISSLER----------------------GREIHAYALRRGFLE 745

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D++ +N L+++Y K   L VA+ LFD +  ++ I+WT +I GY   G  +  + +   M 
Sbjct: 746 DSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMR 805

Query: 152 RSEEKFNEHTCSVILEAC 169
            S  + +  + S IL AC
Sbjct: 806 GSGVEPDTASFSAILYAC 823


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 197/578 (34%), Positives = 323/578 (55%), Gaps = 21/578 (3%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + N F   SLIS+   SG   EA  +F  +   D    N M+  + +    E +   FV 
Sbjct: 78  QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +   DF  N+Y+F + +S C   + +  G Q+H L  K     ++ +G+A++ MY K G 
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              AE +F  + ERNL++W +LI+ Y ++G   +A+  F+  +D G+  D   LA+V+  
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSA 257

Query: 371 CSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           C+    L+ GLQ+H   +K + +  D+ LG ALVD+YAK   +  AR + D  S +    
Sbjct: 258 CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVS 317

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS----LSASQACLVRGRS 485
             +++SG+    +      M     QR      + V+++ L++       ++  L   R 
Sbjct: 318 ETSMVSGYARAASVKAARFMFSKMTQR------NVVSWNALIAGYTQNGENEEALRLFRL 371

Query: 486 LHAYSI-KTGYA------ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
           L   SI  T Y       +D+ VGN+LI MY KCGSI+   ++F+ + +RD VSWNA++ 
Sbjct: 372 LKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIV 431

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            YA +G G  AL +F +M   G  PD ++++GVL AC ++GL E G   F  +E+ +GL 
Sbjct: 432 GYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLI 490

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P+ +H+ CMVDLLGRAG L+EA NLI + P +   ++W +L++  K+  N +    A+++
Sbjct: 491 PLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEK 550

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           LL+++P ++G ++L+SNMYA  G   +  +VR  M    ++K+ GCSWIE++S++H F+ 
Sbjct: 551 LLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLV 610

Query: 719 SGKDHPESEEIYSKLDLLNDEMKL--KVKDSSAFELQD 754
             K HP  ++IYS L +L ++MK    + D++ FE  D
Sbjct: 611 KDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEAYD 648



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 237/513 (46%), Gaps = 45/513 (8%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK-----GY 134
           VHA +L +    + F  N LI++Y K + LD A+KLFD M  R+  TW SLI      G+
Sbjct: 37  VHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGF 96

Query: 135 LDDG--------------------------DYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           LD+                            +E  L     M+R +   NE++    L A
Sbjct: 97  LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSA 156

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C+ L D   G Q+HA   KS +  +V++G++LI MY   G    AE VF G+  +++   
Sbjct: 157 CAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTW 216

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N +I  Y + G +  A  VFV ++ S  EP++ T  +V+S C     ++EG Q+H   VK
Sbjct: 217 NSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVK 276

Query: 289 FGVVR-EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
               R ++ +GNA+V MY K     EA R+FD +S RN++S T+++SGY R+     A  
Sbjct: 277 TNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARF 336

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-------SDVRLGT 400
            F +     +   ++ +A           L L   L   +I   +        SD+ +G 
Sbjct: 337 MFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGN 396

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           +L+D+Y K G ++    + +    +    +NAI+ G+ +     E   + +F +  + G 
Sbjct: 397 SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAE--ALQIFRKMLVCGE 454

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +PD VT   +L   +    +  GR       + G          ++ +  + G ++ A  
Sbjct: 455 KPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKN 514

Query: 521 IFKGIS-DRDIVSWNAMLSAYALHG---LGKGA 549
           + + +  + D V W ++L+A  +HG   +GK A
Sbjct: 515 LIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHA 547



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 180/365 (49%), Gaps = 16/365 (4%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G  DL +G  VHA + KS    D +  + LI++Y+K   +  A+++F GM+ R+ +TW S
Sbjct: 159 GLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNS 218

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI  Y  +G     L +   M  S  + +E T + ++ AC+ L     G QIHA  +K+ 
Sbjct: 219 LITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTN 278

Query: 190 -FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            F +++ +G +L+ MY       EA  VF  ++ ++V     M+  Y +A   + A  +F
Sbjct: 279 KFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMF 338

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK---------FG--VVREISV 297
             +     + N  ++  +I+   +N   EE  +L  L  +         FG  +  +I V
Sbjct: 339 SKMT----QRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFV 394

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GN+++ MY K G  E+  R+F+ + ER+ +SW A+I GY ++G+G +A+  F + L  G 
Sbjct: 395 GNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGE 454

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   +  V+  CS    +E G        +HG +      T +VD+  + G L  A+ 
Sbjct: 455 KPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKN 514

Query: 418 LLDGF 422
           L++  
Sbjct: 515 LIEAM 519



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 180/402 (44%), Gaps = 68/402 (16%)

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           MA H  V  L   + PN   F  ++  C  +      + +H   +      EI + N ++
Sbjct: 1   MAKHGLVRDL---YLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLI 57

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +YGK    ++A ++FD + +RN  +W +LIS   +SG   +A   F    +   C  +S
Sbjct: 58  DVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNS 117

Query: 363 CLA-------------------------------TVIDGCSVCSNLELGLQLHGFAIKHG 391
            ++                               + +  C+   +L +G Q+H    K  
Sbjct: 118 MVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSR 177

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
           Y +DV +G+AL+D+Y+K G +  A  +  G   +    +N++++ + +     E   + +
Sbjct: 178 YSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASE--ALEV 235

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAADVIVGNALITMYA 510
           F +   +G+EPD VT + ++S  AS   L  G  +HA  +KT  +  D+++GNAL+ MYA
Sbjct: 236 FVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYA 295

Query: 511 KCGSIDGAFQIFKGIS-------------------------------DRDIVSWNAMLSA 539
           KC  ++ A ++F  +S                                R++VSWNA+++ 
Sbjct: 296 KCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAG 355

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           Y  +G  + AL LF  +KRE   P   +   +L++ I+ G S
Sbjct: 356 YTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNS 397


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 206/669 (30%), Positives = 349/669 (52%), Gaps = 23/669 (3%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F  N L+  Y +      A++L D M  R+A+++  LI  Y  +G     L       R+
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
               +  + +  L ACS       G  +HA AI  G  + VFV  SL+SMY   G   EA
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--Y 271
             VF     +D    N ++  Y +AG  E    VF  +       N +   +VI  C   
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
            +  ++  + +HG  +K G+  ++ + +A++ MY K G   EA  +F ++ E N++ +  
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 332 LISGYVRSGH------GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
           +I+G+ R+          +A+  + E    G+       ++V+  C++   LE G Q+HG
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE------FNAILSGFME 439
             IK+ +  D  +G+AL+D+Y   G ++      DGF C  ++       + A++SG ++
Sbjct: 344 QVIKYTFQEDDFIGSALIDLYFNSGCME------DGFRCFRSSPKHDIVTWTAMVSGCVQ 397

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
              +  E  + LF +   AG++PD  T S +++  AS A    G  +  ++ K+G+    
Sbjct: 398 N--ELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFT 455

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
           ++GN+ + MYA+ G +D A + F+ +   D+VSW+A++S +A HG  + AL  F+EM   
Sbjct: 456 VMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDA 515

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
              P++I+ LGVL AC + GL + G+  +  + + YGL P ++H  C+VDLLGRAGRL++
Sbjct: 516 KVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLAD 575

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
           A   I++  F   P++WR+L++  ++  + +   L + R+++LEP  + S++++ NMY  
Sbjct: 576 AEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLD 635

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLLND 738
            G L  A+K R  M    + KE G SWIE+   +H FVA  K HPES  IY+KL ++L+ 
Sbjct: 636 AGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSR 695

Query: 739 EMKLKVKDS 747
             KL   D+
Sbjct: 696 IEKLATTDT 704



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 243/500 (48%), Gaps = 13/500 (2%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+ G+AVHA  +  G  +  F +N+L+++Y+K   +  A+++FD    R  ++W SL
Sbjct: 122 AGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSL 181

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF--GEQIHAFAIKS 188
           + GY+  G  E ++ +   M R     N      +++ CS   D      E +H   IK+
Sbjct: 182 VSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKA 241

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE------SE 242
           G +++VF+ +++I MY   G   EA  +FR +   +V   N MI  + +         + 
Sbjct: 242 GLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  ++  + S   +P ++TF++V+  C     +E GKQ+HG  +K+    +  +G+A++
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +Y   G  E+  R F +  + ++++WTA++SG V++    KA++ F E L  G+  D  
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLF 421

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +++V++ C+  +    G Q+  FA K G+     +G + V +YA+ GD+ +A       
Sbjct: 422 TISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEM 481

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                  ++A++S   +       D +  F +   A + P+ +TF  +L+  +    +  
Sbjct: 482 ESHDVVSWSAVISCHAQHGC--ARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDE 539

Query: 483 G-RSLHAYSIKTGYAADVIVGNALITMYAKCGSI-DGAFQIFKGISDRDIVSWNAMLSAY 540
           G R     +   G +  +     ++ +  + G + D    I  GI   D V W ++L++ 
Sbjct: 540 GLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASC 599

Query: 541 ALH-GLGKGALLLFEEMKRE 559
            +H  L +G L+    M+ E
Sbjct: 600 RIHRDLERGQLVANRIMELE 619



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 175/360 (48%), Gaps = 13/360 (3%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G G + + +AVH  ++K+G  +D F  + +I++YAK   L  A  LF  +   + + + +
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 130 LIKGYLDDGDYESVLGI-----ACDMYRSEE----KFNEHTCSVILEACSLLEDRIFGEQ 180
           +I G+      E+V+G      A  +Y   +    +  E T S +L AC+L     FG+Q
Sbjct: 284 MIAGFCRT---ETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   IK  F+ + F+G++LI +YF+SGC  +    FR     D+     M+    +   
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  +F   L +  +P+ +T ++V++ C        G+Q+   A K G  R   +GN+
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNS 460

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
            V MY + G  + A R F  +   +++SW+A+IS + + G    A++ F E +D  +  +
Sbjct: 461 CVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPN 520

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 V+  CS    ++ GL+ +    K +G    ++  T +VD+  + G L  A   +
Sbjct: 521 EITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFI 580


>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
 gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 653

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/607 (31%), Positives = 327/607 (53%), Gaps = 10/607 (1%)

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGT 198
           Y +V G   +  +  E  N  TC   L+ C+  +D + G+QIH F ++ GF +++   GT
Sbjct: 41  YSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGT 100

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           SL++MY   G  R A  VF G + +DV   N +I  +   G    A   +  + ++   P
Sbjct: 101 SLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILP 159

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           + YTF +++    + + + + K++HGLA K G   +  VG+ +VT Y K    E+A+++F
Sbjct: 160 DKYTFPSLLKGS-DAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVF 218

Query: 319 DAISERN-LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           D + +R+  + W AL++GY +      A+  F +  + G+      + +V+   +V  ++
Sbjct: 219 DELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDI 278

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           + G  +HG A+K G  SD+ +  AL+D+Y K   L+ A  + +    +    +N++L   
Sbjct: 279 DNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC-- 336

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-- 495
           +     D +  + LF +   +G+ PD VT + +L      A L +GR +H Y I +G   
Sbjct: 337 VHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLN 396

Query: 496 --AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
             +++  + N+L+ MY KCG +  A  +F  +  +D  SWN M++ Y +   G+ AL +F
Sbjct: 397 RKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMF 456

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
             M R G  PD+I+ +G+LQAC +SG    G     ++E +Y + P  +H+AC++D+LGR
Sbjct: 457 SCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGR 516

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           A +L EA  L  S P  ++P++WR+++S  +L  N   +++A KRL +LEP+  G ++L+
Sbjct: 517 ADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLM 576

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+Y   G  +E   VR  M    + K  GCSWI + + +H F    + HPE + I+  L
Sbjct: 577 SNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636

Query: 734 DLLNDEM 740
            L+   M
Sbjct: 637 SLVISHM 643



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 155/319 (48%), Gaps = 10/319 (3%)

Query: 61  WPQLVKISIGSGDLKLG--QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           +P L+K   GS  ++L   + VH    K G  +D +  + L+  Y+KF  ++ AQK+FD 
Sbjct: 164 FPSLLK---GSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDE 220

Query: 119 MLVRS-AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
           +  R  ++ W +L+ GY     +E  L +   M       + HT + +L A ++  D   
Sbjct: 221 LPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDN 280

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G  IH  A+K+G  +++ V  +LI MY  S    EA ++F  +  +D+   N ++  ++ 
Sbjct: 281 GRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDY 340

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS- 296
            G+ +    +F  +L S   P+  T T V+  C     + +G+++HG  +  G++   S 
Sbjct: 341 CGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSS 400

Query: 297 ---VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
              + N+++ MY K G   +A  +FD++  ++  SW  +I+GY     G  A++ F    
Sbjct: 401 NEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMC 460

Query: 354 DLGICCDSSCLATVIDGCS 372
             G+  D      ++  CS
Sbjct: 461 RAGVKPDEITFVGLLQACS 479


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 196/630 (31%), Positives = 333/630 (52%), Gaps = 12/630 (1%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R+   W +L+K    D  +E V+     M+R EEK +  T  V L+AC  L +  +G
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60

Query: 179 EQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           E IH F  K+    ++++VG+SLI MY   G   EA  +F  L   D+   + M+  + K
Sbjct: 61  EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120

Query: 238 AGESEMAFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
            G    A   F  +  +SD  P+  T   ++S C +      G+ +HG  ++ G   ++S
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           + N+++  Y K    +EA  +F  ++E+++ISW+ +I+ YV++G   +A+  F E +D G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
              + + +  V+  C+  ++LE G + H  AI+ G  ++V++ TALVD+Y K    + A 
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300

Query: 417 MLLDGFSCKYTAEFNAILSGF----MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            +      K    + A++SGF    M   + +E  +M+L +  R     PD +   ++L 
Sbjct: 301 AVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR-----PDAILMLKVLG 355

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
             +    L +    H+Y IK G+ ++  +G +L+ +Y++CGS+  A ++F  I+ +D V 
Sbjct: 356 SCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVV 415

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           W ++++ Y +HG G  AL  F  M R     P++++ L +L AC ++GL   G+ +F  +
Sbjct: 416 WTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELM 475

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
              Y L P LEH+A +VDLLGR G L  A+ +    PFS +P +  TL+   ++  N + 
Sbjct: 476 VNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEM 535

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
           +   +K+L +LE   AG ++L+SNMY  +G  +   K+R ++    + K    S IEI  
Sbjct: 536 AETVAKQLFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRR 595

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           K+H FVA    HPE E +Y  L  L+  MK
Sbjct: 596 KVHKFVADDDLHPEKEPVYGLLKELDLHMK 625



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 235/456 (51%), Gaps = 7/456 (1%)

Query: 73  DLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           ++K G+ +H FL K+ +  +D +  ++LI +Y K  R+  A ++F+ +     +TW+S++
Sbjct: 56  EVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMV 115

Query: 132 KGYLDDGD-YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            G+  +G  Y++V         S+   +  T   ++ AC+ L +   G  +H F ++ GF
Sbjct: 116 SGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGF 175

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            N++ +  SL++ Y  S  F+EA N+F+ +A KDV   + +I  Y + G +  A  VF  
Sbjct: 176 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNE 235

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++    EPN  T   V+  C     +E+G++ H LA++ G+  E+ V  A+V MY K   
Sbjct: 236 MIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 295

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF-LEFLDLGICCDSSCLATVID 369
            EEA  +F  I +++++SW ALISG+  +G   ++I  F +  L+     D+  +  V+ 
Sbjct: 296 PEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLG 355

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS    L+     H + IK+G+ S+  +G +LV++Y++ G L +A  + +  + K T  
Sbjct: 356 SCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVV 415

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQ-RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           + ++++G+   I       +  F+   R + ++P+ VTF  +LS  +    +  G  +  
Sbjct: 416 WTSLITGY--GIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFE 473

Query: 489 YSIKTGYAADVIVGNA-LITMYAKCGSIDGAFQIFK 523
             +     A  +   A L+ +  + G +D A +I K
Sbjct: 474 LMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITK 509



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 2/220 (0%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
            + DL+ G+  H   ++ G + +   +  L+++Y K    + A  +F  +  +  ++W +
Sbjct: 257 AANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVA 316

Query: 130 LIKGYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           LI G+  +G  + S+   +  +  +  + +      +L +CS L      E  H++ IK 
Sbjct: 317 LISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKY 376

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF++N F+G SL+ +Y   G    A  VF  +A KD      +I  Y   G+   A   F
Sbjct: 377 GFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETF 436

Query: 249 VHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
            H++ SS+ +PN+ TF +++S C     + EG ++  L V
Sbjct: 437 NHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMV 476



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 6/127 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G LK  +  H++++K G  ++ F   +L+ LY++   L  A K+F+ + ++  + WTSLI
Sbjct: 361 GFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLI 420

Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACS---LLED--RIFGEQIHAFA 185
            GY   G     L     M RS E K NE T   IL ACS   L+ +  RIF   ++ + 
Sbjct: 421 TGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYR 480

Query: 186 IKSGFEN 192
           +    E+
Sbjct: 481 LAPNLEH 487


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 184/566 (32%), Positives = 304/566 (53%), Gaps = 6/566 (1%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL--EYNK 237
           QIH+  + +    ++    +L+ +Y   G       +F    +     V +  L  + ++
Sbjct: 118 QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSR 177

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           + +   A   F  + ++   PN +TF+ ++  C     + EG+Q+H L  K   + +  V
Sbjct: 178 SNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFV 237

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             A++ MY K G    AE +FD +  RNL+SW ++I G+V++   G+AI  F E L LG 
Sbjct: 238 ATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGP 297

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   +++V+  C+    L+ G Q+HG  +K G +  V +  +LVD+Y K G  + A  
Sbjct: 298 --DQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATK 355

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L  G   +    +N ++ G       + E     F      G+EPD  ++S L   SAS 
Sbjct: 356 LFCGGGDRDVVTWNVMIMGCFR--CRNFEQACTYFQAMIREGVEPDEASYSSLFHASASI 413

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L +G  +H++ +KTG+  +  + ++L+TMY KCGS+  A+Q+F+   + ++V W AM+
Sbjct: 414 AALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMI 473

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + +  HG    A+ LFEEM  EG  P+ I+ + VL AC ++G  + G   FN +  ++ +
Sbjct: 474 TVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNI 533

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
           +P LEH+ACMVDLLGR GRL EA   I S PF    L+W  L+      AN +     ++
Sbjct: 534 KPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAE 593

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           RL  LEP + G+++L+SN+Y   GML+EA +VR  M    + KE+GCSWI++ ++   F 
Sbjct: 594 RLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFN 653

Query: 718 ASGKDHPESEEIYSKLDLLNDEMKLK 743
           A+ + H  ++EIY  L  L + +K +
Sbjct: 654 ANDRSHSRTQEIYGMLQKLKELIKRR 679



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 189/393 (48%), Gaps = 10/393 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  GQ +HA + K    ND F A  L+++YAK   + +A+ +FD M  R+ ++W S+I G
Sbjct: 216 LSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVG 275

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSV--ILEACSLLEDRIFGEQIHAFAIKSGFE 191
           ++ +  Y   +G+    +R          S+  +L AC+ L +  FG+Q+H   +K G  
Sbjct: 276 FVKNKLYGRAIGV----FREVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLV 331

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             V+V  SL+ MY   G F +A  +F G   +DV   N MI+   +    E A   F  +
Sbjct: 332 GLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAM 391

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           +    EP++ +++++         + +G  +H   +K G V+   + +++VTMYGK G  
Sbjct: 392 IREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSM 451

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +A ++F    E N++ WTA+I+ + + G   +AI  F E L+ G+  +     +V+  C
Sbjct: 452 LDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSAC 511

Query: 372 SVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           S    ++ G +  +  A  H     +     +VD+  + G L+ A   ++    +  +  
Sbjct: 512 SHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLV 571

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
              L G   K A+ E    V    +RL  +EPD
Sbjct: 572 WGALLGACGKHANVEMGREV---AERLFKLEPD 601



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 222/482 (46%), Gaps = 22/482 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA--ITWTSLI 131
           LK    +H+ L+ + +       N L+ LYAK   +     LF+     S   +TWT+LI
Sbjct: 113 LKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLI 172

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
                       L     M  +    N  T S IL AC+       G+QIHA   K  F 
Sbjct: 173 NQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFL 232

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           N+ FV T+L+ MY   G    AENVF  + ++++   N MI+ + K      A  VF  +
Sbjct: 233 NDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREV 292

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           LS    P+  + ++V+S C   + ++ GKQ+HG  VK G+V  + V N++V MY K G+ 
Sbjct: 293 LS--LGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLF 350

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+A ++F    +R++++W  +I G  R  +  +A   F   +  G+  D +  +++    
Sbjct: 351 EDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHAS 410

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  + L  G  +H   +K G++ + R+ ++LV +Y K G +  A  +           + 
Sbjct: 411 ASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWT 470

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL----- 486
           A+++ F +    +E   + LF +    G+ P+ +TF  +LS  +    +  G        
Sbjct: 471 AMITVFHQHGCANE--AIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMA 528

Query: 487 HAYSIKTG---YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
           + ++IK G   YA        ++ +  + G ++ A +  + +  + D + W A+L A   
Sbjct: 529 NVHNIKPGLEHYA-------CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGK 581

Query: 543 HG 544
           H 
Sbjct: 582 HA 583



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 2/266 (0%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G  +L  G+ VH  ++K G     +  N+L+++Y K    + A KLF G   R  +TW  
Sbjct: 311 GLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNV 370

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G     ++E        M R   + +E + S +  A + +     G  IH+  +K+G
Sbjct: 371 MIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTG 430

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
              N  + +SL++MY   G   +A  VFR     +V C   MI  +++ G +  A  +F 
Sbjct: 431 HVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFE 490

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKH 308
            +L+    P   TF +V+S C     +++G K  + +A    +   +     +V + G+ 
Sbjct: 491 EMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRV 550

Query: 309 GMSEEAERMFDAIS-ERNLISWTALI 333
           G  EEA R  +++  E + + W AL+
Sbjct: 551 GRLEEACRFIESMPFEPDSLVWGALL 576



 Score = 42.7 bits (99), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 40/260 (15%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  L   S     L  G  +H+ +LK+G   ++  +++L+ +Y K   +  A ++F    
Sbjct: 403 YSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETK 462

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV-ILEACSLLEDRIFGE 179
             + + WT++I  +   G     + +  +M  +E    E+   V +L ACS         
Sbjct: 463 EHNVVCWTAMITVFHQHGCANEAIKLFEEML-NEGVVPEYITFVSVLSACS--------- 512

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
             H   I  GF+            YF+S       N+  GL +        M+    + G
Sbjct: 513 --HTGKIDDGFK------------YFNS--MANVHNIKPGLEHYAC-----MVDLLGRVG 551

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             E A      + S  FEP+   +  ++  C ++  VE G++   +A +   +   + GN
Sbjct: 552 RLEEACRF---IESMPFEPDSLVWGALLGACGKHANVEMGRE---VAERLFKLEPDNPGN 605

Query: 300 AIV--TMYGKHGMSEEAERM 317
            ++   +Y +HGM EEA+ +
Sbjct: 606 YMLLSNIYIRHGMLEEADEV 625


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 197/678 (29%), Positives = 354/678 (52%), Gaps = 11/678 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K     G+ +LG  +H   +K G     F  N LI +Y K   L  A+ LFDG++
Sbjct: 148 FPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIM 207

Query: 121 VRS--AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF- 177
           +     ++W S+I  ++ +G+    L +   M       N +T    L+    +ED  F 
Sbjct: 208 MEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQG---VEDPSFV 264

Query: 178 --GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G  IH   +KS    +V+V  +LI+MY   G   +A  VF  +  +D    N ++   
Sbjct: 265 KLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGL 324

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            +      A + F  + +S  +P+  +  N+I+    +  + +GK++H  A++ G+   +
Sbjct: 325 VQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNM 384

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            +GN +V MY K    +     F+ + E++LISWT +I+GY ++    +AIN F +    
Sbjct: 385 QIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVK 444

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D   + +V+  CS   +     ++HG+  K   L+D+ L  A+V++Y + G +  A
Sbjct: 445 GMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD-LADIMLQNAIVNVYGEVGHIDYA 503

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R   +    K    + ++++  +      E   + LF   +   ++PD +     LS +A
Sbjct: 504 RRAFESIRSKDIVSWTSMITCCVHNGLPVE--ALELFYSLKQTNIQPDSIAIISALSATA 561

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           + + L +G+ +H + I+ G+  +  + ++L+ MYA CG+++ + ++F  +  RD++ W +
Sbjct: 562 NLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTS 621

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++A  +HG G  A+ LF++M  +   PD I+ L +L AC +SGL   G   F  ++  Y
Sbjct: 622 MINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGY 681

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            L P  EH+ACMVDLL R+  L EA + + + P   S  +W  L+    + +N +   LA
Sbjct: 682 QLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELA 741

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           +K LL  + +++G + L+SN++A  G  ++  +VR  M    L K  GCSWIE+D+K+H 
Sbjct: 742 AKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHT 801

Query: 716 FVASGKDHPESEEIYSKL 733
           F+A  K HP++++IY KL
Sbjct: 802 FMARDKSHPQTDDIYLKL 819



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 178/654 (27%), Positives = 306/654 (46%), Gaps = 19/654 (2%)

Query: 16  SQQSLPPLK-KKVPINTFSP---NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGS 71
           S   L PL  K + +NT +     P  Q   L S   ++   R  L +    L+ + + +
Sbjct: 2   STSILTPLPLKPISVNTLNKGTLKPAFQSLTLLSTHPLATPSR--LEHAHSLLLDLCVAA 59

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
             L  GQ +HA LLKS      F A  L+ +Y K   L  A K+FD M  R+  +W +L+
Sbjct: 60  KALPQGQQLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALM 117

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             ++  G Y   + +  DM       +  T   +L+AC  L +   G +IH  A+K G+ 
Sbjct: 118 GAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYG 177

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAY--KDVRCVNFMILEYNKAGESEMAFHVFV 249
             VFV  +LI+MY   G    A  +F G+    +D    N +I  +   G    A  +F 
Sbjct: 178 EFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFR 237

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +       N YTF   +    +   V+ G  +HG  +K     ++ V NA++ MY K G
Sbjct: 238 RMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCG 297

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E+A R+F+++  R+ +SW  L+SG V++     A+N F +  + G   D   +  +I 
Sbjct: 298 RMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIA 357

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
                 NL  G ++H +AI++G  S++++G  LVD+YAK   +K      +    K    
Sbjct: 358 ASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLIS 417

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +  I++G+ +   +   + + LF + ++ GM+ DP+    +L   +        R +H Y
Sbjct: 418 WTTIIAGYAQN--EFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGY 475

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
             K    AD+++ NA++ +Y + G ID A + F+ I  +DIVSW +M++    +GL   A
Sbjct: 476 VFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEA 534

Query: 550 LLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLR-PILEHFACM 607
           L LF  +K+    PD I+I+  L A    S L +G       I + + L  PI    + +
Sbjct: 535 LELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA---SSL 591

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           VD+    G +  +  + +S       +LW ++++ + +      +I   K++ D
Sbjct: 592 VDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHGCGNKAIALFKKMTD 644


>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 202/646 (31%), Positives = 338/646 (52%), Gaps = 11/646 (1%)

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           K  R+  A  LFD M  ++ + WTS + G   +G  E+   +  DM  S    N+  C+ 
Sbjct: 41  KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100

Query: 165 ILEACSLLEDRIF--GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
            L AC+         GEQ+H+ A+++GF  + +VG+ L+ +Y   G  R AE V   +  
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
            DV     ++    ++GE  MA      ++     PN++T T++++ C     +  G Q+
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCP---LVLGVQI 217

Query: 283 HGLAVK-FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           HG  +K  G  + +   + +V  Y ++G  + A+ +FD +  +N+++W  ++  ++R G 
Sbjct: 218 HGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGR 277

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
              A+  F E +  G+   +    ++  G   C ++ LG QLH  AIKHG  S +R+  A
Sbjct: 278 PEDALQLFDEMISEGVVSPNEFAFSIALG--ACESIALGSQLHSLAIKHGLASHLRVSNA 335

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L+ +Y + G ++    +  G        + A +S + +      E  + L S+    G+ 
Sbjct: 336 LLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQN--GHGEKAIALLSRMHSQGLT 393

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           P+   FS +LS  A  A L +GR  H  ++K G       GNALI MY+KCG I  A   
Sbjct: 394 PNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLA 453

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           F  +  RD+ SWN+++  +A HG     L  F EM   G  P++ ++LGVL AC ++GL 
Sbjct: 454 FDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLV 513

Query: 582 EGGICLF-NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           + G+  F + +  +YG      H+ACMVD+LGR+GR  +A+ LI   PF    L+W+TL+
Sbjct: 514 DEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLL 573

Query: 641 SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
           +  +L  N +   LA+++L++L  +D+ S++L+S ++A  G   +A  VR  M++  + K
Sbjct: 574 ASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRK 633

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKD 746
           EAG SW+E+ +++H FVA    HP+S  IY  L  L+D M+    D
Sbjct: 634 EAGRSWVEVRNEVHTFVAQDVSHPDSPSIYRMLWELSDAMRDTAYD 679



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 231/475 (48%), Gaps = 13/475 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + G+ VH+  +++G   D +  + L+ LYA+      A+ +   M     + +TSL+   
Sbjct: 114 RTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSAL 173

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GFENN 193
              G++         M       NEHT + IL AC  L   + G QIH + IK+ GF  +
Sbjct: 174 CRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPL---VLGVQIHGYMIKAMGFSQS 230

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V+  ++L+  Y  +G F  A+ VF  L  K+V     M+  + + G  E A  +F  ++S
Sbjct: 231 VYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMIS 290

Query: 254 SD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                PN++ F+  +  C E++ +  G QLH LA+K G+   + V NA+++MYG+ G+ +
Sbjct: 291 EGVVSPNEFAFSIALGAC-ESIAL--GSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQ 347

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           + E MF  I + +++SWTA IS Y ++GHG KAI         G+  +    ++V+  C+
Sbjct: 348 QLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCA 407

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             + L+ G Q H  A+K G       G AL+++Y+K G +  AR+  D    +    +N+
Sbjct: 408 DLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNS 467

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++ G  +    + + V+  FS+    G EP+  T   +L+       +  G +    ++ 
Sbjct: 468 LIHGHAQH--GEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMA 525

Query: 493 TGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
             Y   +   +   ++ M  + G  D A  + + +  +  ++ W  +L++  LHG
Sbjct: 526 GLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHG 580



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 4/272 (1%)

Query: 67  ISIGSGD-LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
           I++G+ + + LG  +H+  +K G  +    +N L+++Y +   +   + +F G+     +
Sbjct: 303 IALGACESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIV 362

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
           +WT+ I  Y  +G  E  + +   M+      N++  S +L +C+ L     G Q H  A
Sbjct: 363 SWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLA 422

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           +K G +     G +LI+MY   G    A   F  + ++DV   N +I  + + GE +M  
Sbjct: 423 LKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVL 482

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL--HGLAVKFGVVREISVGNAIVT 303
             F  + S+  EPN+ T   V++ C     V+EG       +A  +G          +V 
Sbjct: 483 KAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVD 542

Query: 304 MYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
           M G+ G  ++A  + + +  E  ++ W  L++
Sbjct: 543 MLGRSGRFDDALCLIEEMPFEPGVLVWKTLLA 574


>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
 gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
          Length = 693

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 201/637 (31%), Positives = 327/637 (51%), Gaps = 23/637 (3%)

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           K  RL  A  LFD M  ++ + WT+ I G   +G  E+   +  DM  S    N+  C+ 
Sbjct: 54  KSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNA 113

Query: 165 ILEACSLLEDRI--FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
            L AC+         GEQ+H+ A+++GF  + ++G+ LI +Y   G    AE VFR +  
Sbjct: 114 ALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEA 173

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
            DV     ++    + G+   A  V   ++    +PN++T T++++ C   +G    +Q+
Sbjct: 174 PDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRMIG----EQI 229

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           HG  +K    + +    A++  Y ++G  + AE +F+ +  +N++SW +++   +R G  
Sbjct: 230 HGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRL 289

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGC-SVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             A+  F E +   +  +    +  +  C SVC    LG Q+H  AIK   ++D+R+  A
Sbjct: 290 EDALRVFSEMISEAVEPNEFAFSIALGACGSVC----LGRQIHCSAIKCNLMTDIRVSNA 345

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS-----GFMEKIADDEEDVMVLFSQQR 456
           L+ +Y + G +     +L          + A +S     GF EK        + L  Q  
Sbjct: 346 LLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEK-------AVALLLQMH 398

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
             G  P+   FS  LS  A  A L +GR LH  ++K G    V  GNALI MY+KCG I 
Sbjct: 399 SEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIG 458

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A   F  ++  D++SWN+++   A HG     L  F EM   G+ PDD + + VL  C 
Sbjct: 459 SARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCN 518

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
           ++GL + G   F  +   YGL P   H+ACM+D+LGR GR  EA+++I + PF    L+W
Sbjct: 519 HAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIW 578

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
           +TL++  KL  N     LA+ +L++L  +D+ S++L+SN+YA      +A +VR  M+++
Sbjct: 579 KTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEI 638

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
            + K+AG SWIE+ +++  FVA    H +S  IY  L
Sbjct: 639 GVKKDAGWSWIEVKNEVSTFVARDTSHSDSASIYQML 675



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 233/471 (49%), Gaps = 13/471 (2%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           LG+ VH+  +++G   D +  + LI LY++   +  A+++F  M     + +TSL+    
Sbjct: 128 LGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALC 187

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            +GD    + + C M R   + NEHT + +L  C     R+ GEQIH + +K     +V+
Sbjct: 188 RNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECP----RMIGEQIHGYMLKVMGSQSVY 243

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
             T+LI  Y   G F  AE VF  L  K+V     M+    + G  E A  VF  ++S  
Sbjct: 244 ASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEA 303

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            EPN++ F+  +  C     V  G+Q+H  A+K  ++ +I V NA+++MYG+ G   E E
Sbjct: 304 VEPNEFAFSIALGACG---SVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVE 360

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +   I   +L+SWTA IS   ++G   KA+   L+    G   +    ++ +  C+  +
Sbjct: 361 AVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLA 420

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L+ G QLH  A+K G    V  G AL+++Y+K G + SAR+  D  +      +N+++ 
Sbjct: 421 LLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIH 480

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR-GRS-LHAYSIKT 493
           G  +  A +   V+  FS+   +G +PD  TF  +L +  + A LV+ G +     + + 
Sbjct: 481 GLAQHGAANL--VLEAFSEMCSSGWQPDDSTFIAVL-VGCNHAGLVKEGETFFRLMTDRY 537

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           G          +I M  + G  D A  + K +  + D++ W  +L++  LH
Sbjct: 538 GLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLH 588



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 3/271 (1%)

Query: 67  ISIGS-GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
           I++G+ G + LG+ +H   +K     D   +N L+++Y +   +   + +   +     +
Sbjct: 313 IALGACGSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLV 372

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
           +WT+ I     +G  E  + +   M+      N++  S  L +C+ L     G Q+H  A
Sbjct: 373 SWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLA 432

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           +K G +  V  G +LI+MY   G    A   F  +   DV   N +I    + G + +  
Sbjct: 433 LKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVL 492

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV-KFGVVREISVGNAIVTM 304
             F  + SS ++P+D TF  V+  C     V+EG+    L   ++G+    S    ++ M
Sbjct: 493 EAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDM 552

Query: 305 YGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
            G++G  +EA  M   +  E +++ W  L++
Sbjct: 553 LGRNGRFDEALHMIKNMPFEPDVLIWKTLLA 583


>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 202/646 (31%), Positives = 338/646 (52%), Gaps = 11/646 (1%)

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           K  R+  A  LFD M  ++ + WTS + G   +G  E+   +  DM  S    N+  C+ 
Sbjct: 41  KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100

Query: 165 ILEACSLLEDRIF--GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
            L AC+         GEQ+H+ A+++GF  + +VG+ L+ +Y   G  R AE V   +  
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
            DV     ++    ++GE  MA      ++     PN++T T++++ C     +  G Q+
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCP---LVLGVQI 217

Query: 283 HGLAVK-FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           HG  +K  G  + +   + +V  Y ++G  + A+ +FD +  +N+++W  ++  ++R G 
Sbjct: 218 HGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGR 277

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
              A+  F E +  G+   +    ++  G   C ++ LG QLH  AIKHG  S +R+  A
Sbjct: 278 PEDALQLFDEMISEGVVSPNEFAFSIALG--ACESIALGSQLHSLAIKHGLASHLRVSNA 335

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L+ +Y + G ++    +  G        + A +S + +      E  + L S+    G+ 
Sbjct: 336 LLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQN--GHGEKAIALLSRMHSQGLT 393

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           P+   FS +LS  A  A L +GR  H  ++K G       GNALI MY+KCG I  A   
Sbjct: 394 PNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLA 453

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           F  +  RD+ SWN+++  +A HG     L  F EM   G  P++ ++LGVL AC ++GL 
Sbjct: 454 FDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLV 513

Query: 582 EGGICLF-NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           + G+  F + +  +YG      H+ACMVD+LGR+GR  +A+ LI   PF    L+W+TL+
Sbjct: 514 DEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLL 573

Query: 641 SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
           +  +L  N +   LA+++L++L  +D+ S++L+S ++A  G   +A  VR  M++  + K
Sbjct: 574 ASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRK 633

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKD 746
           EAG SW+E+ +++H FVA    HP+S  IY  L  L+D M+    D
Sbjct: 634 EAGRSWVEVRNEVHTFVAQDVSHPDSPSIYRMLWELSDAMRDTAYD 679



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 231/475 (48%), Gaps = 13/475 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + G+ VH+  +++G   D +  + L+ LYA+      A+ +   M     + +TSL+   
Sbjct: 114 RTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSAL 173

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GFENN 193
              G++         M       NEHT + IL AC  L   + G QIH + IK+ GF  +
Sbjct: 174 CRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPL---VLGVQIHGYMIKAMGFSQS 230

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V+  ++L+  Y  +G F  A+ VF  L  K+V     M+  + + G  E A  +F  ++S
Sbjct: 231 VYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMIS 290

Query: 254 SD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                PN++ F+  +  C E++ +  G QLH LA+K G+   + V NA+++MYG+ G+ +
Sbjct: 291 EGVVSPNEFAFSIALGAC-ESIAL--GSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQ 347

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           + E MF  I + +++SWTA IS Y ++GHG KAI         G+  +    ++V+  C+
Sbjct: 348 QLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCA 407

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             + L+ G Q H  A+K G       G AL+++Y+K G +  AR+  D    +    +N+
Sbjct: 408 DLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNS 467

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++ G  +    + + V+  FS+    G EP+  T   +L+       +  G +    ++ 
Sbjct: 468 LIHGHAQH--GEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMA 525

Query: 493 TGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
             Y   +   +   ++ M  + G  D A  + + +  +  ++ W  +L++  LHG
Sbjct: 526 GLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHG 580



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 4/272 (1%)

Query: 67  ISIGSGD-LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
           I++G+ + + LG  +H+  +K G  +    +N L+++Y +   +   + +F G+     +
Sbjct: 303 IALGACESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIV 362

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
           +WT+ I  Y  +G  E  + +   M+      N++  S +L +C+ L     G Q H  A
Sbjct: 363 SWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLA 422

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           +K G +     G +LI+MY   G    A   F  + ++DV   N +I  + + GE +M  
Sbjct: 423 LKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVL 482

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL--HGLAVKFGVVREISVGNAIVT 303
             F  + S+  EPN+ T   V++ C     V+EG       +A  +G          +V 
Sbjct: 483 KAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVD 542

Query: 304 MYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
           M G+ G  ++A  + + +  E  ++ W  L++
Sbjct: 543 MLGRSGRFDDALCLIEEMPFEPGVLVWKTLLA 574


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 196/645 (30%), Positives = 340/645 (52%), Gaps = 3/645 (0%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N ++++  +F  +  A ++F  M  R   +W  ++ GY   G  E  L +   M  +  +
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            + +T   +L  C  + D   G ++HA  ++ GF + V V  +L++MY   G    A  V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F G+A  D    N MI  + +  E E    +F+ +L ++ +PN  T T+V         V
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
              K++HG AVK G   +++  N+++ MY   G   +A ++F  +  ++ +SWTA+ISGY
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            ++G   KA+  +       +  D   +A+ +  C+    L++G++LH  A   G++  V
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  AL+++YAK   +  A  +    + K    ++++++GF       E    + + +  
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEA---LYYFRYM 491

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           L  ++P+ VTF   LS  A+   L  G+ +HAY ++ G  ++  V NAL+ +Y KCG   
Sbjct: 492 LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A+  F   S++D+VSWN MLS +  HGLG  AL LF +M   G  PD+++ + +L AC 
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
            +G+   G  LF+ + + + + P L+H+ACMVDLL R G+L+EA NLIN  P      +W
Sbjct: 612 RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVW 671

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             L++  ++  + +   LA+K +L+LEP D    +L+ ++Y   G   + A+VR TM + 
Sbjct: 672 GALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            L ++ GCSW+E+    H F+   + HP+ +EI   L  + + MK
Sbjct: 732 GLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMK 776



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 239/485 (49%), Gaps = 7/485 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++   G  D ++G+ VHA +L+ G  ++    N L+ +YAK   +  A+K+FDGM V
Sbjct: 201 PCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAV 260

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              I+W ++I G+ ++ + E+ L +   M  +E + N  T + +  A  +L +  F +++
Sbjct: 261 TDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEM 320

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H FA+K GF  +V    SLI MY   G   +A  +F  +  KD      MI  Y K G  
Sbjct: 321 HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  V+  +   +  P+D T  + ++ C     ++ G +LH LA   G +R + V NA+
Sbjct: 381 DKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANAL 440

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K    ++A  +F  ++E++++SW+++I+G+  +    +A+  F   L   +  +S
Sbjct: 441 LEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HVKPNS 499

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                 +  C+    L  G ++H + ++ G  S+  +  AL+D+Y K G    A      
Sbjct: 500 VTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSV 559

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDV-MVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            S K    +N +LSGF   +A    D+ + LF+Q    G  PD VTF  LL   +    +
Sbjct: 560 HSEKDVVSWNIMLSGF---VAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMV 616

Query: 481 VRGRSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLS 538
           ++G  L H  + K     ++     ++ + ++ G +  A+ +   +  + D   W A+L+
Sbjct: 617 IQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLN 676

Query: 539 AYALH 543
              +H
Sbjct: 677 GCRIH 681



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 190/389 (48%), Gaps = 3/389 (0%)

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +G +++SM    G    A  VF  +  +DV   N M+  Y K G  E A  ++  +L + 
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P+ YTF  V+  C        G+++H   ++FG   E+ V NA+VTMY K G    A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++FD ++  + ISW A+I+G+  +      +  FL  L+  +  +   + +V     + S
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            +    ++HGFA+K G+  DV    +L+ +Y   G +  A  +      K    + A++S
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+ +    D+   + +++   L  + PD VT +  L+  A    L  G  LH  +   G+
Sbjct: 373 GYEKNGFPDK--ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
              V+V NAL+ MYAK   ID A ++FK ++++D+VSW++M++ +  +     AL  F  
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGG 584
           M      P+ ++ +  L AC  +G    G
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSG 518



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 172/348 (49%), Gaps = 4/348 (1%)

Query: 251 LLSSDFEPNDY-TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           LL S  EP D   +  +  +C     V+ G +    A        + +GNA+++M  + G
Sbjct: 86  LLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFG 145

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A R+F  + ER++ SW  ++ GY + G   +A++ +   L  G+  D      V+ 
Sbjct: 146 EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLR 205

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C    +  +G ++H   ++ G+  +V +  ALV +YAK GD+ +AR + DG +      
Sbjct: 206 TCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCIS 265

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA+++G  E    + E  + LF       ++P+ +T + +   S   + +   + +H +
Sbjct: 266 WNAMIAGHFEN--HECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGF 323

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           ++K G+A DV   N+LI MY   G +  A +IF  +  +D +SW AM+S Y  +G    A
Sbjct: 324 AVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKA 383

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           L ++  M+    +PDD++I   L AC   G  + GI L +E+ Q  G 
Sbjct: 384 LEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKL-HELAQNKGF 430


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 190/581 (32%), Positives = 310/581 (53%), Gaps = 35/581 (6%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N++   +++S Y   G   E E +F  +  +D    N +I  Y   G    +   +  +L
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 253 SSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
            +D  F  N  TF+ ++ +  +   V+ G+Q+HG  VKFG +  + VG+ +V MY K GM
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193

Query: 311 SEEAERMFDAISERNL-------------------------------ISWTALISGYVRS 339
              A ++FD + E+N+                               ISWT++I+G+ ++
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G    AI+ F E     +  D     +V+  C     L+ G Q+H + I+  Y  ++ + 
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           +ALVD+Y K  ++KSA  +    +CK    + A+L G+ +      E+ +  FS  +  G
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN--GYSEEAVKTFSDMQKYG 371

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           +EPD  T   ++S  A+ A L  G   HA ++ +G  + + V NAL+T+Y KCGSI+ + 
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           ++F  IS +D V+W A++S YA  G     + LFE M   G  PD ++ +GVL AC  +G
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           L E G  +F  +   +G+ PI +H+ CM+DL  RAGR+ EA N IN  PFS   + W TL
Sbjct: 492 LVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATL 551

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           +S  +   N      A++ L++L+P +  S++L+S++YA +G  +E A++R  M D  L 
Sbjct: 552 LSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLR 611

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           KE GCSWI+  +++H F A  K +P S++IYS+L+ LN +M
Sbjct: 612 KEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKM 652



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 195/381 (51%), Gaps = 32/381 (8%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG------------- 118
           G +KLG+ +H  ++K G  +  F  + L+++Y+K   +  A+K+FD              
Sbjct: 157 GCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLI 216

Query: 119 ------------------MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
                             M  R +I+WTS+I G+  +G     + I  +M     + +++
Sbjct: 217 MGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQY 276

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   +L AC  +     G+Q+HA+ I++ +++N+FV ++L+ MY      + AE VF+ +
Sbjct: 277 TFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKM 336

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             K+V     M++ Y + G SE A   F  +     EP+D+T  +VIS C     +EEG 
Sbjct: 337 TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGA 396

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           Q H  A+  G++  I+V NA+VT+YGK G  E++ R+F+ IS ++ ++WTAL+SGY + G
Sbjct: 397 QFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFG 456

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI-KHGYLSDVRLG 399
              + I  F   L  G+  D      V+  CS    +E G Q+    I +HG +      
Sbjct: 457 KANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHY 516

Query: 400 TALVDIYAKGGDLKSARMLLD 420
           T ++D++++ G ++ AR  ++
Sbjct: 517 TCMIDLFSRAGRIEEARNFIN 537



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 252/568 (44%), Gaps = 73/568 (12%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQK---- 114
           N +  L+K+   + +    + +H+ ++K+    +TF  NNLI+ YAK   +  A K    
Sbjct: 10  NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQ 69

Query: 115 ---------------------------LFDGMLVRSAITWTSLIKGYLDDG-DYESVLGI 146
                                      LFD M  R  ++W SLI GY   G  Y+SV   
Sbjct: 70  MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129

Query: 147 ACDMYRSEEKFNEH--TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
              M +++  FN +  T S +L   S       G QIH   +K GF + VFVG+ L+ MY
Sbjct: 130 NL-MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY 188

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD--------- 255
              G    A  VF  L  K+V   N +I+   + G  E +  +F  +   D         
Sbjct: 189 SKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMIT 248

Query: 256 ----------------------FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
                                  + + YTF +V++ C   + ++EGKQ+H   ++     
Sbjct: 249 GFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKD 308

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
            I V +A+V MY K    + AE +F  ++ +N++SWTA++ GY ++G+  +A+  F +  
Sbjct: 309 NIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 368

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
             GI  D   L +VI  C+  ++LE G Q H  A+  G +S + +  ALV +Y K G ++
Sbjct: 369 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 428

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            +  L +  S K    + A++SG+ +    +E   + LF      G++PD VTF  +LS 
Sbjct: 429 DSHRLFNEISFKDEVTWTALVSGYAQFGKANE--TIGLFESMLAHGLKPDKVTFIGVLSA 486

Query: 474 SASQACLVRGRSLHAYSI-KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIV 531
            +    + +G  +    I + G          +I ++++ G I+ A      +    D +
Sbjct: 487 CSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAI 546

Query: 532 SWNAMLSAYALHG---LGKGALLLFEEM 556
           SW  +LS+   +G   +GK A     E+
Sbjct: 547 SWATLLSSCRFYGNMDIGKWAAEFLMEL 574



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           +  LL L        + ++LH++ IKT    +  + N LI+ YAK GSI  A ++F  + 
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
             ++ SWN +LSAY+  G       LF+ M R 
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRR 104


>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 652

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 191/607 (31%), Positives = 326/607 (53%), Gaps = 10/607 (1%)

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGT 198
           Y +V G   +  +  E  N  T    L+ C+  +D + G+QIH F ++ GF +++    T
Sbjct: 40  YSTVSGQIEEHPKRYEHHNVATSIATLQRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVT 99

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           SL++MY   G  R A  VF G + +DV   N +I  +   G    A  ++  + +    P
Sbjct: 100 SLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMDMYREMRAKGILP 158

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           + YTF +++    + + V + K++H LA K G V +  VG+A+VT Y K    E+A+++F
Sbjct: 159 DKYTFPSLLKGS-DAMEVSDVKKVHALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVF 217

Query: 319 DAISERN-LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           D + +R+  + W AL++GY        A+  F +  + G+      + +V+   +V  +L
Sbjct: 218 DELPDRDDSVLWNALVNGYSHIFRFEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDL 277

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           + G  +HG A+K G+ S + +  AL+D+Y K   L+ A  + +    +    +N++L   
Sbjct: 278 DNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLC-- 335

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-- 495
           +     D +  + LF     +G+ PD VT + +L      A L +GR +H Y I +G   
Sbjct: 336 VHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLN 395

Query: 496 --AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
             +++  + N+L+ MY KCG +  A  +F  +  +D  SWN M++ Y +   G+ AL +F
Sbjct: 396 RKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMF 455

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
             M R G  PD+I+ +G+LQAC +SG    G     ++E +Y + P  +H+AC++D+LGR
Sbjct: 456 SCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETLYNILPTSDHYACVIDMLGR 515

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           A +L EA +L  S P  ++P++WR+++S  +L  N   +++A KRL +LEP+  G ++L+
Sbjct: 516 ADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGNKDLAVVAGKRLYELEPEHCGVYVLM 575

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+Y      +E   VR TM +  + K  GCSWI + + +H F    + HPE E I+  L
Sbjct: 576 SNVYVEAKKYEEVLDVRDTMKEQNVKKTPGCSWIGLQNGVHTFFTGDQTHPEFESIHGWL 635

Query: 734 DLLNDEM 740
            LL   M
Sbjct: 636 SLLISHM 642



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 237/504 (47%), Gaps = 54/504 (10%)

Query: 54  RTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLY----AKFNRL 109
           R    +D P+ V  S+ +   K G    A L+  GS+ D F  N LI+ +    +  + +
Sbjct: 87  RKGFLDDSPRAVT-SLVNMYAKCGLMRRAVLVFGGSERDVFGYNALISGFVVNGSPLDAM 145

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
           D+ +++    ++    T+ SL+KG                             S  +E  
Sbjct: 146 DMYREMRAKGILPDKYTFPSLLKG-----------------------------SDAMEVS 176

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV- 228
            +       +++HA A K GF ++ +VG++L++ Y       +A+ VF  L  +D   + 
Sbjct: 177 DV-------KKVHALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLW 229

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N ++  Y+     E A  VF  +       + +T T+V+S    +  ++ G+ +HGLAVK
Sbjct: 230 NALVNGYSHIFRFEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVK 289

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G    I V NA++ +YGK    EEA  +F+A+ ER+L +W +++  +   G     +  
Sbjct: 290 MGFDSGIVVSNALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLAL 349

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL----SDVRLGTALVD 404
           F   L  GI  D   L TV+  C   ++L+ G ++HG+ I  G L    S+  +  +L+D
Sbjct: 350 FETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMD 409

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y K GDL+ ARM+ D    K +A +N +++G+   +    E  + +FS    AG++PD 
Sbjct: 410 MYVKCGDLRDARMVFDSMRVKDSASWNIMINGY--GVQSCGELALDMFSCMCRAGVKPDE 467

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQ-- 520
           +TF  LL   +    +  GR+  A  ++T Y       +   +I M  +   ++ A+   
Sbjct: 468 ITFVGLLQACSHSGFVNEGRNFLA-QMETLYNILPTSDHYACVIDMLGRADKLEEAYDLA 526

Query: 521 IFKGISDRDIVSWNAMLSAYALHG 544
           I   I D  +V W ++LS+  LHG
Sbjct: 527 ISMPICDNPVV-WRSILSSCRLHG 549


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 196/645 (30%), Positives = 340/645 (52%), Gaps = 3/645 (0%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N ++++  +F  +  A ++F  M  R   +W  ++ GY   G  E  L +   M  +  +
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            + +T   +L  C  + D   G ++HA  ++ GF + V V  +L++MY   G    A  V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F G+A  D    N MI  + +  E E    +F+ +L ++ +PN  T T+V         V
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
              K++HG AVK G   +++  N+++ MY   G   +A ++F  +  ++ +SWTA+ISGY
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            ++G   KA+  +       +  D   +A+ +  C+    L++G++LH  A   G++  V
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  AL+++YAK   +  A  +    + K    ++++++GF       E    + + +  
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEA---LYYFRYM 491

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           L  ++P+ VTF   LS  A+   L  G+ +HAY ++ G  ++  V NAL+ +Y KCG   
Sbjct: 492 LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A+  F   S++D+VSWN MLS +  HGLG  AL LF +M   G  PD+++ + +L AC 
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
            +G+   G  LF+ + + + + P L+H+ACMVDLL R G+L+EA NLIN  P      +W
Sbjct: 612 RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVW 671

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             L++  ++  + +   LA+K +L+LEP D    +L+ ++Y   G   + A+VR TM + 
Sbjct: 672 GALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            L ++ GCSW+E+    H F+   + HP+ +EI   L  + + MK
Sbjct: 732 GLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMK 776



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 252/512 (49%), Gaps = 15/512 (2%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++   G  D ++G+ VHA +L+ G  ++    N L+ +YAK   +  A+K+FDGM V
Sbjct: 201 PCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAV 260

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              I+W ++I G+ ++ + E+ L +   M  +E + N  T + +  A  +L +  F +++
Sbjct: 261 TDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEM 320

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H FA+K GF  +V    SLI MY   G   +A  +F  +  KD      MI  Y K G  
Sbjct: 321 HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  V+  +   +  P+D T  + ++ C     ++ G +LH LA   G +R + V NA+
Sbjct: 381 DKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANAL 440

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K    ++A  +F  ++E++++SW+++I+G+  +    +A+  F   L   +  +S
Sbjct: 441 LEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HVKPNS 499

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                 +  C+    L  G ++H + ++ G  S+  +  AL+D+Y K G    A      
Sbjct: 500 VTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSV 559

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDV-MVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            S K    +N +LSGF   +A    D+ + LF+Q    G  PD VTF  LL   +    +
Sbjct: 560 HSEKDVVSWNIMLSGF---VAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMV 616

Query: 481 VRGRSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLS 538
           ++G  L H  + K     ++     ++ + ++ G +  A+ +   +  + D   W A+L+
Sbjct: 617 IQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLN 676

Query: 539 AYALHG---LGKGALLLFEEMKREGFAPDDIS 567
              +H    LG+ A  +  E++     P+D++
Sbjct: 677 GCRIHRHVELGELAAKVILELE-----PNDVA 703



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 190/389 (48%), Gaps = 3/389 (0%)

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +G +++SM    G    A  VF  +  +DV   N M+  Y K G  E A  ++  +L + 
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P+ YTF  V+  C        G+++H   ++FG   E+ V NA+VTMY K G    A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++FD ++  + ISW A+I+G+  +      +  FL  L+  +  +   + +V     + S
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            +    ++HGFA+K G+  DV    +L+ +Y   G +  A  +      K    + A++S
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+ +    D+   + +++   L  + PD VT +  L+  A    L  G  LH  +   G+
Sbjct: 373 GYEKNGFPDK--ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
              V+V NAL+ MYAK   ID A ++FK ++++D+VSW++M++ +  +     AL  F  
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGG 584
           M      P+ ++ +  L AC  +G    G
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSG 518



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 172/348 (49%), Gaps = 4/348 (1%)

Query: 251 LLSSDFEPNDY-TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           LL S  EP D   +  +  +C     V+ G +    A        + +GNA+++M  + G
Sbjct: 86  LLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFG 145

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A R+F  + ER++ SW  ++ GY + G   +A++ +   L  G+  D      V+ 
Sbjct: 146 EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLR 205

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C    +  +G ++H   ++ G+  +V +  ALV +YAK GD+ +AR + DG +      
Sbjct: 206 TCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCIS 265

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA+++G  E    + E  + LF       ++P+ +T + +   S   + +   + +H +
Sbjct: 266 WNAMIAGHFEN--HECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGF 323

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           ++K G+A DV   N+LI MY   G +  A +IF  +  +D +SW AM+S Y  +G    A
Sbjct: 324 AVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKA 383

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           L ++  M+    +PDD++I   L AC   G  + GI L +E+ Q  G 
Sbjct: 384 LEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKL-HELAQNKGF 430


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 185/643 (28%), Positives = 340/643 (52%), Gaps = 11/643 (1%)

Query: 103 YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE----KFN 158
           Y +   +  A  LF+ M       W  +I+G++D+G    +   A D Y   E    + +
Sbjct: 70  YVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNG----LFWDAVDFYHRMEFGGVRGD 125

Query: 159 EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR 218
             T   +++AC  L D   GE++H   IKSG + ++++G SLI MY   GC   AE VFR
Sbjct: 126 NFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFR 185

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            +  +D+   N MI  Y   G+   +   F  + +S  + + ++   ++  C     +  
Sbjct: 186 EMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRN 245

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           GK++H   ++  +  ++ V  ++V MY K G  + AER+FD I+++++++W A+I GY  
Sbjct: 246 GKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSL 305

Query: 339 SGHGGKAINGFLEFLDLG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           +    ++     +  + G +  D   +  ++  C+    + LG  +HGFAI++G+L  + 
Sbjct: 306 NAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLV 365

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           L TALVD+Y + G LK A  L    + +    +NA+++ + +    +    M LF     
Sbjct: 366 LETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKN--GENRKAMTLFQDLCN 423

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
             ++PD  T + +L   A  A L     +H Y  K    ++  V N+++ MY KCG++  
Sbjct: 424 KTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLR 483

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A +IF  ++ +D++SWN ++ AYA+HG G+ ++ LF EM+ +GF P+  + + +L +C  
Sbjct: 484 AREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSV 543

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           +GL   G   FN +++ Y + P +EH+ C++DL+GR G L  A N I   P + +  +W 
Sbjct: 544 AGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWG 603

Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
           +L++ S+   + + + +A++ +L LE  + G ++L+SNMYA  G  ++  +++  M    
Sbjct: 604 SLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEG 663

Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           L K  GCS +++ SK   FV   +   E   +Y  LD+++ ++
Sbjct: 664 LEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKI 706



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 235/462 (50%), Gaps = 8/462 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G  DL  G+ VH  ++KSG   D +  N+LI +YAK   ++ A+ +F  M 
Sbjct: 129 YPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMP 188

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           VR  ++W S+I GY+  GD    L    +M  S  K +  +   IL ACSL      G++
Sbjct: 189 VRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKE 248

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   ++S  E +V V TSL+ MY   G    AE +F  +  K +   N MI  Y+   +
Sbjct: 249 IHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQ 308

Query: 241 SEMAFHVFVHLLSS--DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           S  +F  +V  +       P+  T  N++  C +   +  GK +HG A++ G +  + + 
Sbjct: 309 SFESF-AYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLE 367

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A+V MYG+ G  + AE +F  ++ERNLISW A+I+ Y ++G   KA+  F +  +  + 
Sbjct: 368 TALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLK 427

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D++ +A+++   +  ++L    Q+HG+  K    S+  +  ++V +Y K G+L  AR +
Sbjct: 428 PDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREI 487

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D  + K    +N ++  +   I       + LFS+ R  G EP+  TF  LL LS S A
Sbjct: 488 FDRMTFKDVISWNTVIMAY--AIHGFGRISIELFSEMREKGFEPNGSTFVSLL-LSCSVA 544

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGA 518
            LV     +  S+K  Y  +  + +   ++ +  + G++D A
Sbjct: 545 GLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHA 586



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 4/269 (1%)

Query: 57  LFNDWPQLVKISIGSGDLK---LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQ 113
           L  DW  ++ +      L+   LG++VH F +++G          L+++Y +  +L  A+
Sbjct: 325 LHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAE 384

Query: 114 KLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
            LF  M  R+ I+W ++I  Y  +G+    + +  D+     K +  T + IL A + L 
Sbjct: 385 CLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELA 444

Query: 174 DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
                EQIH +  K   ++N FV  S++ MY   G    A  +F  + +KDV   N +I+
Sbjct: 445 SLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIM 504

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVV 292
            Y   G   ++  +F  +    FEPN  TF +++  C     V EG +  + +   + + 
Sbjct: 505 AYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNIN 564

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAI 321
             I     I+ + G+ G  + A+   + +
Sbjct: 565 PGIEHYGCILDLIGRTGNLDHAKNFIEEM 593


>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
          Length = 799

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 214/714 (29%), Positives = 339/714 (47%), Gaps = 69/714 (9%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           + DT   N ++  Y+    +  A  LFDGM     ++W +L+ GY   G ++  + +  +
Sbjct: 80  RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVE 139

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M R     +  T +V+L++CS LE+   G Q+HA A+K+G E +V  G++L+ MY     
Sbjct: 140 MARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 199

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             +A   F G+  ++       I    +  +      +F+ +       +  ++ +    
Sbjct: 200 LDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C     +  G+QLH  A+K     +  VG AIV +Y K     +A R F  +    + + 
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            A++ G              L  +   I  D   L+ V   C+       G Q+H  AIK
Sbjct: 320 NAMMVG--------------LFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK 365

Query: 390 ---------------------------------------HGYLSDVRL------------ 398
                                                  +G+  D  L            
Sbjct: 366 SVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFV 425

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
            + +VD+Y K G +  A+ L D    +    +NAILSGF   +  + E     FS+    
Sbjct: 426 ASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGF--SLNKESEAAQKFFSEMLDM 483

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G++PD  TF+ +L   A+ A +  G+ +H   IK     D  + + L+ MYAKCG +  +
Sbjct: 484 GLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDS 543

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             +F+ +  RD VSWNAM+  YALHGLG  AL +FE M++E   P+  + + VL+AC + 
Sbjct: 544 LLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHV 603

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           GL + G   F+ +   Y L P LEHFACMVD+LGR+    EA+  INS PF    ++W+T
Sbjct: 604 GLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKT 663

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+S+ K+  + + + LA+  +L L+P D+  +IL+SN+YA  G   + ++ R  +   RL
Sbjct: 664 LLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRL 723

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSSAF 750
            KE GCSWIE  S++H F+   K HP S E+Y  L+ L  EMKL     DS++F
Sbjct: 724 KKEPGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASF 777



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 203/450 (45%), Gaps = 67/450 (14%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L LG  VHA  +K+G + D    + L+++Y K   LD A   F GM  R+ ++W S I 
Sbjct: 164 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIA 223

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G + +  Y   L +  +M R     ++ + +    +C+ +     G Q+HA AIK+ F +
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  VGT+++ +Y  +    +A   F GL               N   E+  A  V + ++
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLP--------------NHTVETSNAMMVGLFMI 329

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF-------------------GVVR 293
            S    +  + + V S C E  G   G+Q+H LA+K                    G+ +
Sbjct: 330 RSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMKQ 389

Query: 294 EISV--------------------------------GNAIVTMYGKHGMSEEAERMFDAI 321
           + SV                                 + +V MY K G+ +EA+++ D I
Sbjct: 390 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRI 449

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
             + ++SW A++SG+  +     A   F E LD+G+  D    ATV+D C+  + +ELG 
Sbjct: 450 GGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 509

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           Q+HG  IK   L D  + + LVD+YAK GD+  + ++ +    +    +NA++ G+   +
Sbjct: 510 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGY--AL 567

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
                + + +F + +   + P+  TF  +L
Sbjct: 568 HGLGVEALRMFERMQKENVVPNHATFVAVL 597



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS-------IKTGYAADVIVGNALI 506
           QQ+   + P  VTFSR+      Q+C   GR   A         + +G+     V N L+
Sbjct: 5   QQQPPPVAPARVTFSRVF-----QSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLL 59

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MYA+C     A ++F  +  RD VSWN ML+AY+  G    A+ LF+ M      PD +
Sbjct: 60  QMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD----PDVV 115

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           S   ++      G+ +  + LF E+ +  G+ P    FA ++
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMAR-RGVSPDRTTFAVLL 156


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 228/762 (29%), Positives = 372/762 (48%), Gaps = 40/762 (5%)

Query: 8   NLLQPPFKSQQS---LPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQL 64
           ++L P  KS+ +   LPP ++  PI  FS    S        SS     +    N+    
Sbjct: 74  HILAPTLKSRHTSKFLPPRRR--PIQLFSAARSSP-----QFSSYGLGNQ----NEEIDF 122

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
             +   S      + +HA L+ +G     F +  L+NLYA    + +++  FD +  +  
Sbjct: 123 NFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDV 182

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            TW S+I  Y+ +G +   +G    +   SE + + +T   +L+AC  L D   G +IH 
Sbjct: 183 YTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHC 239

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           +A K GF+ NVFV  SLI MY   G    A ++F  + ++D+   N MI    + G +  
Sbjct: 240 WAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 299

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  V   +     + N  T  +++ VC +   +     +H   +K G+  ++ V NA++ 
Sbjct: 300 ALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALIN 359

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVR-----SGHG---GKAINGFL-EFLD 354
           MY K G  E+A + F  +   +++SW ++I+ Y +     + HG      +NGF  + L 
Sbjct: 360 MYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLK 413
           L        LA+++     C N      +HGF ++ G+L  DV +G A+VD+YAK G L 
Sbjct: 420 L------VSLASIVAQSRDCKN---SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           SA  + +    K    +N +++G+ +      E + V    +    + P+  T+  +L  
Sbjct: 471 SAHKVFEIILVKDVISWNTLITGYAQN-GLASEAIEVYKMMEECKEIIPNQGTWVSILPA 529

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            A    L +G  +H   IKT    DV V   LI +Y KCG +  A  +F  +     V+W
Sbjct: 530 YAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTW 589

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           NA++S + +HG  +  L LF EM  EG  PD ++ + +L AC +SG  E G   F  +++
Sbjct: 590 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 649

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            YG++P L+H+ CMVDLLGRAG L  A   I   P      +W  L+   ++  N +   
Sbjct: 650 -YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGK 708

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
            AS RL +++ K+ G ++L+SN+YA  G  +   KVR+   +  L K  G S IE++ K+
Sbjct: 709 FASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKV 768

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
             F    + HP+ +EIY +L +L  +MK L      +F LQD
Sbjct: 769 DVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQD 810


>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Vitis vinifera]
          Length = 590

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 203/572 (35%), Positives = 314/572 (54%), Gaps = 16/572 (2%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYF--HSGCFREAENVFRGLAYKDVRC----VNFMI 232
           +QIHA  I SG  ++ FV  S +S +F  H G    A   F  L   D+       N +I
Sbjct: 22  KQIHAHLIASGLLHDEFV-LSKVSEFFGKHIGFVDYA---FDFLNQTDLHVGTLPYNTLI 77

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             Y  +   + AF V+  ++ + F P+ YTF  V+  C + LGV+EG+Q+HG+AVK G +
Sbjct: 78  AAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFL 137

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            ++ V N+++  Y   G    A R+FD +  R+++SWT LISGYVR+G   +AIN FL+ 
Sbjct: 138 CDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLK- 196

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
             + +  + +   +V+  C     L +G  +HG   K  +   + +G ALVD+Y K   L
Sbjct: 197 --MDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECL 254

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             AR L D    +    + +I+SG ++      +D + LF   +++G+EPD +  + +LS
Sbjct: 255 CEARKLFDELPDRDIVSWTSIISGLVQ--CKQPKDSLELFYDMQISGVEPDRIILTSVLS 312

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
             AS   L  GR +  Y  + G   D+ +G AL+ MYAKCG I+ A  IF GI +R+I +
Sbjct: 313 ACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFT 372

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL-SEGGICLFNEI 591
           WNA+L   A+HG G  AL  FE M   G  P++++ L +L AC +SGL +EG    +  I
Sbjct: 373 WNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMI 432

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
            Q +   P LEH+ CM+DLL RAG L EA   I + P     L+W  L+S  K   N + 
Sbjct: 433 SQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVEL 492

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
           S      LL+L+ +D+G ++L+SN+YA     D+  +VR  M D  + K  G S IE+D 
Sbjct: 493 SQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDG 552

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMKLK 743
           + H F+    +H  +E+I+  L++L +++ L+
Sbjct: 553 EAHEFLVGDTNHSRNEDIHILLNILANQVYLE 584



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 221/474 (46%), Gaps = 14/474 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM----LVRSAITWTSLIKG 133
           + +HA L+ SG  +D F  + +   + K   +      FD +    L    + + +LI  
Sbjct: 22  KQIHAHLIASGLLHDEFVLSKVSEFFGK--HIGFVDYAFDFLNQTDLHVGTLPYNTLIAA 79

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y      ++   +   +  +    + +T  V+L+AC+       GEQ+H  A+K GF  +
Sbjct: 80  YASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCD 139

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           ++V  SL+  Y   G +  A  VF  +  +DV     +I  Y + G  + A ++F   L 
Sbjct: 140 LYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLF---LK 196

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            D  PN  TF +V+  C     +  GK +HGL  K      + VGNA+V MY K     E
Sbjct: 197 MDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCE 256

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++FD + +R+++SWT++ISG V+      ++  F +    G+  D   L +V+  C+ 
Sbjct: 257 ARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACAS 316

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L+ G  +  +  + G   D+ +GTALVD+YAK G ++ A  + +G   +    +NA+
Sbjct: 317 LGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNAL 376

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           L G    +     + +  F     AG+ P+ VTF  +L+       +  GRS     I  
Sbjct: 377 LGGL--AMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQ 434

Query: 494 --GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
              ++  +     +I +  + G +D A++  + +    D++ W A+LSA   +G
Sbjct: 435 PFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANG 488



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 3/311 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K       ++ G+ VH   +K G   D +  N+L++ Y+   +   A ++FD ML
Sbjct: 108 FPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEML 167

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           VR  ++WT LI GY+  G ++  + +   M   +   N  T   +L AC  +     G+ 
Sbjct: 168 VRDVVSWTGLISGYVRTGLFDEAINLFLKM---DVVPNVATFVSVLVACGRMGYLSMGKG 224

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H    K  F   + VG +L+ MY    C  EA  +F  L  +D+     +I    +  +
Sbjct: 225 VHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQ 284

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + +  +F  +  S  EP+    T+V+S C     ++ G+ +     + G+  +I +G A
Sbjct: 285 PKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTA 344

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V MY K G  E A  +F+ I  RN+ +W AL+ G    GHG +A+  F   +  GI  +
Sbjct: 345 LVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPN 404

Query: 361 SSCLATVIDGC 371
                 ++  C
Sbjct: 405 EVTFLAILTAC 415



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 3/266 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L +G+ VH  + K          N L+++Y K   L  A+KLFD +  R  ++WTS+I
Sbjct: 217 GYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSII 276

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G +     +  L +  DM  S  + +    + +L AC+ L    +G  +  +  + G E
Sbjct: 277 SGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIE 336

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            ++ +GT+L+ MY   GC   A ++F G+  +++   N ++      G    A   F  +
Sbjct: 337 WDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELM 396

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQ--LHGLAVKFGVVREISVGNAIVTMYGKHG 309
           + +   PN+ TF  +++ C  +  V EG+      ++  F     +     ++ +  + G
Sbjct: 397 IGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAG 456

Query: 310 MSEEAERMFDAIS-ERNLISWTALIS 334
           + +EA +    +    +++ W AL+S
Sbjct: 457 LLDEAYKFIRNMPLPPDVLIWGALLS 482


>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 686

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 206/682 (30%), Positives = 361/682 (52%), Gaps = 19/682 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDLK G  +H F    G  +    +N ++ +Y K  R D A  +F+ ++    ++W +++
Sbjct: 15  GDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTIL 74

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+ D+   +  L     M  +   F+  T S  L  C   E    G Q+ +  +KSG E
Sbjct: 75  SGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLE 131

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVFVH 250
           +++ VG S I+MY  SG FR A  VF  + +KD+   N ++   ++ G     A  +F  
Sbjct: 132 SDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRD 191

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++    E +  +FT+VI+ C     ++  +Q+HGL +K G    + VGN +++ Y K G+
Sbjct: 192 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 251

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E  + +F  +SERN++SWT +IS      +   A++ FL     G+  +      +++ 
Sbjct: 252 LEAVKSVFYQMSERNVVSWTTMISS-----NRDDAVSIFLNMRLDGVYPNEVTFVGLLNA 306

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
                 ++ GL++HG  IK G++S+  +G + + +YAK   L+ A+   D  + +    +
Sbjct: 307 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIISW 366

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA--SQACLVRGRSLHA 488
           NA++SGF +     E   M L +    A   P+  TF  +L+  A      +  G+  HA
Sbjct: 367 NAMISGFAQNGFSHEALKMFLSAT---AETMPNEYTFGSVLNAIAFAEDISVKHGQRCHA 423

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           + +K G  +  +V +AL+ MYAK G+I+ + ++F  +S R+   W +++SAY+ HG    
Sbjct: 424 HLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNS 483

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
            + LF EM +E  APD ++ L VL AC   G+ + G  + N + + Y L P  EH++CMV
Sbjct: 484 VMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSHEHYSCMV 543

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           D+LGRAGRL EA  L++  P      + ++++   +L  N K     ++  ++++P+ +G
Sbjct: 544 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 603

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS-----KLHHFVASGKDH 723
           S++ + N+YA +   D+AA++R  M    +SKEAG SWI++        +  F +  K H
Sbjct: 604 SYVQMYNIYAEKEQWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSH 663

Query: 724 PESEEIYSKLDLLNDEMKLKVK 745
           P+S+EIY  ++++  EM L+ K
Sbjct: 664 PKSDEIYRMVEIVGLEMNLEGK 685



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 214/422 (50%), Gaps = 13/422 (3%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           +GS   +LG  + + ++KSG ++D    N+ I +Y++      A+++FD M  +  I+W 
Sbjct: 110 VGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWN 169

Query: 129 SLIKGYLDDGD--YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           SL+ G   +G   +E+VL I  DM R   + +  + + ++  C    D     QIH   I
Sbjct: 170 SLLSGLSQEGTFGFEAVL-IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI 228

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G+E+ + VG  L+S Y   G     ++VF  ++ ++V     MI     +   + A  
Sbjct: 229 KRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMI-----SSNRDDAVS 283

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F+++      PN+ TF  +++    N  ++EG ++HGL +K G V E SVGN+ +TMY 
Sbjct: 284 IFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYA 343

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K    E+A++ FD I+ R +ISW A+ISG+ ++G   +A+  FL         +     +
Sbjct: 344 KFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLS-ATAETMPNEYTFGS 402

Query: 367 VIDGCSVCSNLEL--GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           V++  +   ++ +  G + H   +K G  S   + +AL+D+YAK G++  +  + +  S 
Sbjct: 403 VLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQ 462

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           +    + +I+S +      D   VM LF +     + PD VTF  +L+    +  + +G 
Sbjct: 463 RNQFVWTSIISAYSSH--GDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGH 520

Query: 485 SL 486
            +
Sbjct: 521 EI 522



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 7/179 (3%)

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D VT    L+L A +  L RG  +H +S   G+ + V V NA++ MY K G  D A  IF
Sbjct: 2   DEVTLC--LALKACRGDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIF 59

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           + + D D+VSWN +LS +  + +   AL     MK  G   D  +    L  C+ S    
Sbjct: 60  ENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFR 116

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            G+ L + + +  GL   L      + +  R+G    A  + +  PF +  + W +L+S
Sbjct: 117 LGLQLQSTVVK-SGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKD-MISWNSLLS 173


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 209/677 (30%), Positives = 363/677 (53%), Gaps = 20/677 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           KLG+ +H F++ SG  +    +N+L+N+Y K  +L+ A  +F  +     ++W +++ G+
Sbjct: 90  KLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGF 149

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
                 E+ L  A  M  +  KF+  T +  L  C   E+ +FG Q+H  A+K GF+ +V
Sbjct: 150 EKS---ENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDV 206

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVFVHLLS 253
           FVG +L++MY       +A  VF  +  +D    + MI  Y + G++ + A  VFV ++ 
Sbjct: 207 FVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVR 266

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              + ++   T  +SVC     +E GKQ+H LAVK G     SVGN +++ Y K  + E+
Sbjct: 267 EGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIED 326

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+ +F+ I++RN+ISWT +IS Y        A++ F +    G+  +      ++   ++
Sbjct: 327 AKAVFELINDRNVISWTTMISLYEEG-----AVSLFNKMRLDGVYPNDVTFIGLLHAITI 381

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + +E GL +HG  IK  ++S++ +G +L+ +YAK   ++ A  +      +    +NA+
Sbjct: 382 RNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNAL 441

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQ-ACLVRGRSLHAYSI 491
           +SG+ +     E     L++   +   +P+  TF  +L ++SA +   L  G+  H++ I
Sbjct: 442 ISGYAQNALCQEALEAFLYA---IMEYKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLI 498

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G   D I+  AL+ MYAK GSI  + ++F   S +   +W A++S YA HG  +  + 
Sbjct: 499 KVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIK 558

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LFEEM++E   PD +  L VL AC  + + + G   FN + + + + P  EH++CMVD+L
Sbjct: 559 LFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDML 618

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAGRL EA  ++   P        ++L+   +   N + +   +  L+  EP ++G ++
Sbjct: 619 GRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPLESGPYV 678

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS------KLHHFVASGKDHPE 725
           L+SN+YA +G  ++ AKVR  M +  + KE G SW+++ +       LH F +    HP+
Sbjct: 679 LMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFSWVDVGNFGASNLYLHGFSSGDVSHPQ 738

Query: 726 SEEIYSKLDLLNDEMKL 742
           SEEI+     +  EMK 
Sbjct: 739 SEEIFRMAKYMGAEMKF 755



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 179/350 (51%), Gaps = 9/350 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+LG+ +H   +K+G +  T   N LI+ Y+K   ++ A+ +F+ +  R+ I+WT++I 
Sbjct: 288 NLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMIS 347

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y      E  + +   M       N+ T   +L A ++      G  +H   IK+ F +
Sbjct: 348 LY-----EEGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVS 402

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            + VG SLI+MY      ++A  VF  L Y+++   N +I  Y +    + A   F++ +
Sbjct: 403 ELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAI 462

Query: 253 SSDFEPNDYTFTNVISVCY--ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
             +++PN+YTF +V++     E++ ++ G++ H   +K G+  +  +  A++ MY K G 
Sbjct: 463 -MEYKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGS 521

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            +E++R+F+  S+++  +WTALISGY + G     I  F E     I  D+    +V+  
Sbjct: 522 IQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTA 581

Query: 371 CSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           CS    +++G Q     IK H    +    + +VD+  + G L+ A  +L
Sbjct: 582 CSRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEIL 631



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 6/260 (2%)

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD     N  S+  ++  Y+      +++  F      G+  ++     V+   + C  
Sbjct: 29  LFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGF 88

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
            +LG Q+HGF I  G++S + +  +L+++Y K G L+ A  +           +N ILSG
Sbjct: 89  PKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSG 148

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F     +  E+ +    +  L G++ D VT++  LS        + G  LH  ++K G+ 
Sbjct: 149 F-----EKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFK 203

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG-LGKGALLLFEE 555
            DV VGNAL+TMY++   +  A ++F  +  RD VSW+AM++ YA  G  G  A+L+F +
Sbjct: 204 GDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQ 263

Query: 556 MKREGFAPDDISILGVLQAC 575
           M REG   D++ I G L  C
Sbjct: 264 MVREGVKFDNVPITGALSVC 283



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 5/159 (3%)

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L D       A FN +L  ++ +  D     +  F      G++ +   F+ +L+L A  
Sbjct: 29  LFDQSPPPNAASFNRVLLNYLPR--DGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACC 86

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
                GR +H + I +G+ + + V N+L+ MY K G ++ AF +F+ + D DIVSWN +L
Sbjct: 87  GFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTIL 146

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
           S +      + AL     M   G   D ++    L  C+
Sbjct: 147 SGFE---KSENALSFALRMNLNGVKFDSVTYTTALSFCL 182


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 203/677 (29%), Positives = 353/677 (52%), Gaps = 12/677 (1%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H+  +K G+  D +  NN++N Y K   L  A  LFD M +R +++W ++I G+++ G+ 
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
           E+   +   M     + + +T   +L+  +       G+Q+H+  IK G+  NV+ G++L
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           + MY       +A   F  ++  +    N MI  Y +AG+ E AF +   +     + +D
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
            T+  ++ +  +        QLHG  +K G+    ++ NA++T Y K G  ++A+R+FD+
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS 260

Query: 321 ISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC---SVCSN 376
            +  R+L++W +L++ Y+       A    ++  + G   D     ++I  C   ++ +N
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNN 320

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG--GDLKSARMLLDGFSCKYTAEFNAIL 434
              G  LHG  IK G+   V +  AL+ +Y K   G +K A  + +    K    +N+IL
Sbjct: 321 ---GRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSIL 377

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G  +      ED +  F   R A M+ D  +FS +L   +  A    G+ +H  ++K G
Sbjct: 378 TGLSQ--TGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYG 435

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             ++  V ++LI MY+KCG I+ A + F+  S    ++WNA++  YA HG    AL LF 
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFF 495

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
            M+ +    D I+ + VL AC + GL E G      +E  YG+ P +EH+AC VDL GR+
Sbjct: 496 LMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRS 555

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           GRL EA  LI   PF     +W+T +   +   N + +   +  LL++EP++  +++L+S
Sbjct: 556 GRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLS 615

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           NMY      DE AKV+  M +  + K  G SWIE+++ +H F+A    HP  ++IY  L+
Sbjct: 616 NMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLE 675

Query: 735 LLNDEMKLKVKDSSAFE 751
           +L +E+  +++D+  F+
Sbjct: 676 VLLEEIT-RMEDADGFK 691



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 239/478 (50%), Gaps = 15/478 (3%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G   LGQ VH+ ++K G   + +  + L+++YAK  +L+ A   F  +   + ++W ++
Sbjct: 112 AGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAM 171

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF---GEQIHAFAIK 187
           I GY   GD E+   +   M +  EK ++ T + +L    LL+D  F     Q+H   IK
Sbjct: 172 INGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLL---PLLDDADFCNLTSQLHGKIIK 228

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFH 246
            G E    +  +LI+ Y   G   +A+ +F   A  +D+   N ++  Y    + ++AF 
Sbjct: 229 HGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFK 288

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           + + +    FEP+ Y++T++IS C+       G+ LHGL +K G  + + + NA+++MY 
Sbjct: 289 LLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYL 348

Query: 307 K--HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           K  +G  +EA  +F+++  ++ +SW ++++G  ++G    A+  FL      +  D    
Sbjct: 349 KSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSF 408

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           + V+  CS  +  +LG Q+H  A+K+G  S+  + ++L+ +Y+K G ++ AR   +  S 
Sbjct: 409 SAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASK 468

Query: 425 KYTAEFNAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
             +  +NA++ G+ +    +   D+  L  ++++   + D +TF  +L+  +    + +G
Sbjct: 469 NSSITWNALMFGYAQHGQCNVALDLFFLMEEKKV---KMDHITFVAVLTACSHIGLVEQG 525

Query: 484 -RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSA 539
            + L       G    +      + +Y + G ++ A  + + +  + D   W   L A
Sbjct: 526 CKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGA 583



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 8/205 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            +LGQ +H   LK G +++ F +++LI +Y+K   ++ A++ F+     S+ITW +L+ G
Sbjct: 421 FQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFG 480

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGF 190
           Y   G     L +   M   + K +  T   +L ACS   L+E     + +       G 
Sbjct: 481 YAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGC--KFLRCMESDYGV 538

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHVFV 249
              +      + +Y  SG   EA+ +   + +K D       +      G  E+A  V  
Sbjct: 539 PPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAG 598

Query: 250 HLLSSDFEPNDYTFTNVISVCYENL 274
           HLL  + EP ++    ++S  Y NL
Sbjct: 599 HLL--EMEPEEHCTYVLLSNMYGNL 621


>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
 gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
          Length = 632

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 194/565 (34%), Positives = 324/565 (57%), Gaps = 12/565 (2%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q HA  +  GF  N F+ T LIS Y   G    +  VF  L +K V   N +I  + K 
Sbjct: 47  QQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLINGFVKN 106

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
                AF  F  +       +DYT   +  VC+E   +  GK +HG ++K G V ++ V 
Sbjct: 107 RAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIVA 166

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG--KAINGFLEFLDL- 355
           N++++MY K G   E  ++FD + ERN+ SW  ++SGY  SG     K ++GF++ + + 
Sbjct: 167 NSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFVKDMQIE 226

Query: 356 GICCDSSCLATVIDGCS-VCSNLELGLQLHGFAIK----HGYLSDVRLGTALVDIYAKGG 410
           G+  D+  +++++  C+      + G +LHGF ++     G  ++V LG  L+D+Y++  
Sbjct: 227 GLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSN 286

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA-GMEPDPVTFSR 469
            +   R + D   C+    + A+++G ++  A +E   +VLF + ++  G+EP+ V+   
Sbjct: 287 RVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEG--LVLFHEMQVRDGVEPNKVSLVS 344

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK-GISDR 528
           +L   ++ A L   + +H Y+I+  +  DV + NALI MY+KCGS+D A Q+F+ G   R
Sbjct: 345 VLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSFRR 404

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D +SW++M+S Y LHG G+ A+ ++ +M + G  PD I+I+GVL AC  +GL + G+C++
Sbjct: 405 DPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVDEGLCIY 464

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
                 Y ++P +E  AC+VD+LGR+G+L +A++ I + P   SP +W  +VS S +  N
Sbjct: 465 KSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVSASIIHGN 524

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           S+   LA + L+ LEP++  +++ +SN++A     D  ++VRT M D  L+K  GCSWI 
Sbjct: 525 SEMQDLAYRFLVQLEPENPSNYVSLSNLHASSRRWDVVSEVRTMMKDRCLTKTPGCSWIS 584

Query: 709 IDSKLHHFVASGKDHPESEEIYSKL 733
           I++  H F A+ K HP S+ IY  L
Sbjct: 585 INNTTHFFYAADKLHPCSKSIYELL 609



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 243/483 (50%), Gaps = 14/483 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LKL Q  HA +L  G   + F A  LI+ YA F    +++ +FD +  +S   W SLI G
Sbjct: 43  LKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLING 102

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           ++ +  Y    G    M       +++T + + + C  + D   G+ IH  ++K+GF  +
Sbjct: 103 FVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLD 162

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV--FVHL 251
           V V  SL+SMY   G F E   +F  +  ++V   N ++  Y  +G+      V  FV  
Sbjct: 163 VIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFVKD 222

Query: 252 LSSD-FEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKF----GVVREISVGNAIVTMY 305
           +  +  +P+ +T ++++++C  ++G  + G++LHG  V+     G   E+ +G  ++ MY
Sbjct: 223 MQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMY 282

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCL 364
            +    +   R+FD +  RN+ +WTA+I+G+V++G   + +  F E  +  G+  +   L
Sbjct: 283 SRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSL 342

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD-GFS 423
            +V+  CS  + L    Q+HG+AI+  + +DV L  AL+D+Y+K G L  A+ + + G  
Sbjct: 343 VSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSF 402

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +++++SG+   +    E+ + ++++    G +PD +T   +LS  +    +  G
Sbjct: 403 RRDPISWSSMISGY--GLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVDEG 460

Query: 484 RSLHAYSI-KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYA 541
             ++  +I K      V +   ++ M  + G +  A    K +      S W A++SA  
Sbjct: 461 LCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVSASI 520

Query: 542 LHG 544
           +HG
Sbjct: 521 IHG 523


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 212/683 (31%), Positives = 349/683 (51%), Gaps = 63/683 (9%)

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W SLI+ Y D+G     L +   M+      + +T   + +AC  +     GE  HA ++
Sbjct: 95  WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
            +GF +NVFVG +L++MY       +A  VF  ++  DV   N +I  Y K G+ ++A  
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214

Query: 247 VFVHLLSSDF--EPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVT 303
           +F   ++++F   P++ T  NV+  C  +LG    GKQLH  AV   +++ + VGN +V 
Sbjct: 215 MFSR-MTNEFGCRPDNITLVNVLPPC-ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTAL------------------------------- 332
           MY K GM +EA  +F  +S ++++SW A+                               
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332

Query: 333 ----ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
               ISGY + G G +A+    + L  GI  +   L +V+ GC+    L  G ++H +AI
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392

Query: 389 KH-------GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY--TAEFNAILSGFME 439
           K+       G+  +  +   L+D+YAK   + +AR + D  S K      +  ++ G+ +
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452

Query: 440 KIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-A 496
               D    + L S+  +      P+  T S  L   AS A L  G+ +HAY+++    A
Sbjct: 453 H--GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
             + V N LI MYAKCGSI  A  +F  +  ++ V+W ++++ Y +HG G+ AL +F+EM
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           +R GF  D +++L VL AC +SG+ + G+  FN ++ ++G+ P  EH+AC+VDLLGRAGR
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L+ A+ LI   P    P++W   +S  ++    +    A++++ +L     GS+ L+SN+
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA  G   +  ++R+ M    + K  GCSW+E       F    K HP ++EIY    +L
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY---QVL 747

Query: 737 NDEMKLKVKD-----SSAFELQD 754
            D M+ ++KD      + F L D
Sbjct: 748 LDHMQ-RIKDIGYVPETGFALHD 769



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 234/497 (47%), Gaps = 60/497 (12%)

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKD--VRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           + LIS Y   GC   A ++ R     D  V   N +I  Y   G +    ++F  + S  
Sbjct: 63  SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           + P++YTF  V   C E   V  G+  H L++  G +  + VGNA+V MY +     +A 
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVC 374
           ++FD +S  +++SW ++I  Y + G    A+  F     + G   D+  L  V+  C+  
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
               LG QLH FA+    + ++ +G  LVD+YAK G +  A  +    S K    +NA++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302

Query: 435 SGF------------MEKIADDEEDVMVL--------FSQQRL-------------AGME 461
           +G+             EK+ +++  + V+        ++Q+ L             +G++
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSI-------KTGYAADVIVGNALITMYAKCGS 514
           P+ VT   +LS  AS   L+ G+ +H Y+I       K G+  + +V N LI MYAKC  
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422

Query: 515 IDGAFQIFKGIS--DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA--PDDISILG 570
           +D A  +F  +S  +RD+V+W  M+  Y+ HG    AL L  EM  E     P+  +I  
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLR------PILEHFACMVDLLGRAGRLSEAMNLI 624
            L AC     S   + +  +I   Y LR      P+     C++D+  + G +S+A  L+
Sbjct: 483 ALVACA----SLAALRIGKQIHA-YALRNQQNAVPLFVS-NCLIDMYAKCGSISDA-RLV 535

Query: 625 NSSPFSESPLLWRTLVS 641
             +  +++ + W +L++
Sbjct: 536 FDNMMAKNEVTWTSLMT 552



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 241/534 (45%), Gaps = 78/534 (14%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++ G++ HA  L +G  ++ F  N L+ +Y++   L  A+K+FD M V   ++W S+I+ 
Sbjct: 143 VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIES 202

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSV-------ILEACSLLEDRIFGEQIHAFAI 186
           Y   G  +    +A +M+      NE  C         +L  C+ L     G+Q+H FA+
Sbjct: 203 YAKLGKPK----VALEMF--SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
            S    N+FVG  L+ MY   G   EA  VF  ++ KDV   N M+  Y++ G  E A  
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316

Query: 247 VF-----------------------------------VHLLSSDFEPNDYTFTNVISVCY 271
           +F                                     +LSS  +PN+ T  +V+S C 
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376

Query: 272 ENLGVEEGKQLHGLAVKF-------GVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-- 322
               +  GK++H  A+K+       G   E  V N ++ MY K    + A  MFD++S  
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFL--DLGICCDSSCLATVIDGCSVCSNLELG 380
           ER++++WT +I GY + G   KA+    E    D     ++  ++  +  C+  + L +G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496

Query: 381 LQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
            Q+H +A+++   +  + +   L+D+YAK G +  AR++ D    K    + ++++G+  
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGY-- 554

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-----RSLHAYSIKTG 494
            +    E+ + +F + R  G + D VT   +L   +    + +G     R    + +  G
Sbjct: 555 GMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPG 614

Query: 495 ---YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
              YA        L+ +  + G ++ A ++ + +  +   V W A LS   +HG
Sbjct: 615 PEHYA-------CLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 167/397 (42%), Gaps = 48/397 (12%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI------ 125
           G   LG+ +H F + S    + F  N L+++YAK   +D A  +F  M V+  +      
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302

Query: 126 -----------------------------TWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
                                        TW++ I GY   G     LG+   M  S  K
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAI-------KSGFENNVFVGTSLISMYFHSGC 209
            NE T   +L  C+ +   + G++IH +AI       K+G  +   V   LI MY     
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422

Query: 210 FREAENVFRGLAYK--DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE--PNDYTFTN 265
              A  +F  L+ K  DV     MI  Y++ G++  A  +   +   D +  PN +T + 
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
            +  C     +  GKQ+H  A++       + V N ++ MY K G   +A  +FD +  +
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-L 383
           N ++WT+L++GY   G+G +A+  F E   +G   D   L  V+  CS    ++ G++  
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +      G          LVD+  + G L +A  L++
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIE 639



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 4/307 (1%)

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI--SERNLISWTALI 333
           + + K +H   + FG++  +++ + +++ Y   G    A  +      S+  +  W +LI
Sbjct: 41  ISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
             Y  +G   K +  F     L    D+     V   C   S++  G   H  ++  G++
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           S+V +G ALV +Y++   L  AR + D  S      +N+I+  +  K+   +  + +   
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY-AKLGKPKVALEMFSR 218

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
                G  PD +T   +L   AS      G+ LH +++ +    ++ VGN L+ MYAKCG
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 278

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            +D A  +F  +S +D+VSWNAM++ Y+  G  + A+ LFE+M+ E    D ++    + 
Sbjct: 279 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338

Query: 574 ACIYSGL 580
                GL
Sbjct: 339 GYAQRGL 345



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 16/278 (5%)

Query: 72  GDLKLGQAVHAF-------LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV--R 122
           G L  G+ +H +       L K+G  ++    N LI++YAK  ++D A+ +FD +    R
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKFNEHTCSVILEACSLLEDRIFGEQ 180
             +TWT +I GY   GD    L +  +M+    + + N  T S  L AC+ L     G+Q
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498

Query: 181 IHAFAIKSGFENNV--FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           IHA+A+++  +N V  FV   LI MY   G   +A  VF  +  K+      ++  Y   
Sbjct: 499 IHAYALRNQ-QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISV 297
           G  E A  +F  +    F+ +  T   V+  C  +  +++G +  + +   FGV      
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH 617

Query: 298 GNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
              +V + G+ G    A R+ + +  E   + W A +S
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655


>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 214/678 (31%), Positives = 346/678 (51%), Gaps = 30/678 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++ G+++HA LLK G  + T   N+  + Y K   LD A  +FD M  R +++W  +I G
Sbjct: 65  VRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHG 124

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +L  G  +  L           + N  T  + + AC  L     G ++H + I+SGF + 
Sbjct: 125 HLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDI 184

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             V  SL+SMY  +   R AE +F  +  +DV   + MI  Y + GE+ MA  +F+ + S
Sbjct: 185 PSVQNSLLSMYADNDMER-AEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXS 243

Query: 254 -SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +  E +  T  +V+  C     +  G+ +HG+ +  G+  ++ VGN+I+ MY K    E
Sbjct: 244 NAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHE 303

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A + F+ +  RN +SW ++ISG VR+    +A++ F      G   D   L  ++  C 
Sbjct: 304 SAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCK 363

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +      +H   I+ GY  +  +  +L+D Y+K   ++ A  L D    K T  ++A
Sbjct: 364 YFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSA 423

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++GF      DE   + LF +   A  +P+ VT   LL   +  A L R +  H   I+
Sbjct: 424 MIAGFNHCGKPDE--AIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIR 481

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G AA+V VG A++ MYAKCG I  + + F  I +++IVSW AM++A  ++GL + AL L
Sbjct: 482 RGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALAL 541

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
             EMK  G  P+ ++ L VL AC + GL E G+  F  + Q +G+ P LEH++CMVD+L 
Sbjct: 542 LSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLX 601

Query: 613 RAGRLSEAMNLINSSP--FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           RAG+L+ AMNLI   P    +   LW  L+S  +   NS+    A+ R+L LEP+ +  +
Sbjct: 602 RAGKLNXAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAXRVLXLEPQSSAGY 661

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
            L S+MYA  G+                        + ++ K   FVA  + HP + EI+
Sbjct: 662 FLASSMYAASGL------------------------VHVEDKAWRFVAGDESHPRAGEIW 697

Query: 731 SKLDLLNDEMKLKVKDSS 748
             ++ L+D MK+  ++ +
Sbjct: 698 GVVEQLHDCMKIAERNET 715



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 241/502 (48%), Gaps = 16/502 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G ++ G  +H ++++SG  +     N+L+++YA  N ++ A++LFD M  R  I+W+ +I
Sbjct: 164 GAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMI 222

Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GY+  G+    L +  +M  +   + +  T   +L+AC+   D   G  +H   I  G 
Sbjct: 223 GGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGL 282

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + ++FVG S+I MY        A   F  +  ++    N +I    +  +   A  +F  
Sbjct: 283 DYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYS 342

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  + F  ++ T  N++  C   +   + K +H + +++G      V N+++  Y K  +
Sbjct: 343 MGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDL 402

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A ++FD +  ++ +SW+A+I+G+   G   +AI  F E        +   + ++++ 
Sbjct: 403 IELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEA 462

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            SV ++L+     HG  I+ G  ++V +GTA++D+YAK G++  +R   D    K    +
Sbjct: 463 FSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSW 522

Query: 431 NAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
            A+++   M  +A    D + L S+ +L G++P+ VT   +LS  +    +  G S    
Sbjct: 523 GAMIAACGMNGLA---RDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFEN 579

Query: 490 SIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR---DIVSWNAMLSAYALHG- 544
            ++  G    +   + ++ M  + G ++ A  + + + +R       W A+LSA    G 
Sbjct: 580 MVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLWGALLSACRSSGN 639

Query: 545 --LGKGA---LLLFEEMKREGF 561
             LG GA   +L  E     G+
Sbjct: 640 SRLGAGAAXRVLXLEPQSSAGY 661



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 175/358 (48%), Gaps = 1/358 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    +GD+ +G++VH  ++  G   D F  N++I++Y+K +  + A K F+ M  R+
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCRN 316

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W S+I G +    +   L +   M ++  + +E T   +L++C    D    + IH+
Sbjct: 317 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHS 376

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+ G+E N FV  SLI  Y        A  +F  L  KD    + MI  +N  G+ + 
Sbjct: 377 IVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDE 436

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +  +  +PN  T  +++     +  ++  K  HG+ ++ G+  E++VG AI+ 
Sbjct: 437 AIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILD 496

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G    + + FD I E+N++SW A+I+    +G    A+    E    G+  +   
Sbjct: 497 MYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVT 556

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
             +V+  CS    +E GL      ++ HG    +   + +VD+  + G L  A  L++
Sbjct: 557 TLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIE 614



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 153/319 (47%), Gaps = 2/319 (0%)

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
            D T  + I     +L V  GK +H   +K G     S GN+    Y K G  + A  +F
Sbjct: 48  TDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVF 107

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           D++  R+ +SW  +I G++  G     +  F +   +    + S L   I  C     +E
Sbjct: 108 DSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAME 167

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
            GL++HG+ I+ G+L    +  +L+ +YA   D++ A  L D    +    ++ ++ G++
Sbjct: 168 EGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYV 226

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
           +   +    + +       A +E D +T   +L   A+   +  GRS+H   I  G   D
Sbjct: 227 Q-TGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYD 285

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           + VGN++I MY+K    + AF+ F  +  R+ VSWN+++S          AL LF  M +
Sbjct: 286 LFVGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGK 345

Query: 559 EGFAPDDISILGVLQACIY 577
            GF  D+++++ +LQ+C Y
Sbjct: 346 AGFRADEVTLVNLLQSCKY 364



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 444 DEEDVMVLFSQQRLAGME-PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D  +    + Q + AG +  DP     +L  + S   +  G+S+HA  +K G+ +    G
Sbjct: 29  DSWEACSRYHQMKKAGAQLTDPTLVHSILK-ACSSLPVRHGKSIHASLLKQGFDSLTSTG 87

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
           N+    Y K G++D A  +F  +  RD VSWN M+  +   G     L  F + +   F 
Sbjct: 88  NSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFE 147

Query: 563 PDDISILGVLQACIYSGLSEGGI 585
           P+  +++  + AC   G  E G+
Sbjct: 148 PNVSTLVLAIHACRSLGAMEEGL 170


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 203/677 (29%), Positives = 353/677 (52%), Gaps = 12/677 (1%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H+  +K G+  D +  NN++N Y K   L  A  LFD M +R +++W ++I G+++ G+ 
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
           E+   +   M     + + +T   +L+  +       G+Q+H+  IK G+  NV+ G++L
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           + MY       +A   F  ++  +    N MI  Y +AG+ E AF +   +     + +D
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
            T+  ++ +  +        QLHG  +K G+    ++ NA++T Y K G  ++A+R+FD+
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS 260

Query: 321 ISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC---SVCSN 376
            +  R+L++W +L++ Y+       A    ++  + G   D     ++I  C   ++ +N
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNN 320

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG--GDLKSARMLLDGFSCKYTAEFNAIL 434
              G  LHG  IK G+   V +  AL+ +Y K   G +K A  + +    K    +N+IL
Sbjct: 321 ---GRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSIL 377

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G  +      ED +  F   R A M+ D  +FS +L   +  A    G+ +H  ++K G
Sbjct: 378 TGLSQ--TGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYG 435

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             ++  V ++LI MY+KCG I+ A + F+  S    ++WNA++  YA HG    AL LF 
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFF 495

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
            M+ +    D I+ + VL AC + GL E G      +E  YG+ P +EH+AC VDL GR+
Sbjct: 496 LMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRS 555

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           GRL EA  LI   PF     +W+T +   +   N + +   +  LL++EP++  +++L+S
Sbjct: 556 GRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLS 615

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           NMY      DE AKV+  M +  + K  G SWIE+++ +H F+A    HP  ++IY  L+
Sbjct: 616 NMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLE 675

Query: 735 LLNDEMKLKVKDSSAFE 751
           +L +E+  +++D+  F+
Sbjct: 676 VLLEEIT-RMEDADGFK 691



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 237/481 (49%), Gaps = 21/481 (4%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G   LGQ VH+ ++K G   + +  + L+++YAK  +L+ A   F  +   + ++W ++
Sbjct: 112 AGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAM 171

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF---GEQIHAFAIK 187
           I GY   GD E+   +   M +  EK ++ T + +L    LL+D  F     Q+H   IK
Sbjct: 172 INGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLL---PLLDDADFCNLTSQLHGKIIK 228

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFH 246
            G E    +  +LI+ Y   G   +A+ +F   A  +D+   N ++  Y    + ++AF 
Sbjct: 229 HGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFK 288

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           + + +    FEP+ Y++T++IS C+       G+ LHGL +K G  + + + NA+++MY 
Sbjct: 289 LLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYL 348

Query: 307 K--HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           K  +G  +EA  +F+++  ++ +SW ++++G  ++G    A+  FL      +  D    
Sbjct: 349 KSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSF 408

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           + V+  CS  +  +LG Q+H  A+K+G  S+  + ++L+ +Y+K G ++ AR   +  S 
Sbjct: 409 SAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASK 468

Query: 425 KYTAEFNAILSGFME----KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             +  +NA++ G+ +     +A D      LF       ++ D +TF  +L+  +    +
Sbjct: 469 NSSITWNALMFGYAQHGQCNVALD------LFFLMEXKKVKMDHITFVAVLTACSHIGLV 522

Query: 481 VRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLS 538
            +G + L       G    +      + +Y + G ++ A  + + +  + D   W   L 
Sbjct: 523 EQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLG 582

Query: 539 A 539
           A
Sbjct: 583 A 583



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 8/205 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            +LGQ +H   LK G +++ F +++LI +Y+K   ++ A++ F+     S+ITW +L+ G
Sbjct: 421 FQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFG 480

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGF 190
           Y   G     L +   M   + K +  T   +L ACS   L+E     + +       G 
Sbjct: 481 YAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGC--KFLRCMESDYGV 538

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHVFV 249
              +      + +Y  SG   EA+ +   + +K D       +      G  E+A  V  
Sbjct: 539 PPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAG 598

Query: 250 HLLSSDFEPNDYTFTNVISVCYENL 274
           HLL  + EP ++    ++S  Y NL
Sbjct: 599 HLL--EMEPEEHCTYVLLSNMYGNL 621


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 207/673 (30%), Positives = 347/673 (51%), Gaps = 17/673 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA LL  G   +   +  LINLY     + +++  FD +  ++  +W S+I  Y+  
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 138 GDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           G Y   +     ++        + + +T   IL+AC  L D   G+++H    K GFE++
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VFV  SL+ +Y   G    A  VF  +  KDV   N MI  + + G +  A  V   +  
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              + +  T  +++ VC ++  V  G  +H   +K G+  ++ V NA++ MY K G  ++
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+ +FD +  R+L+SW ++I+ Y ++     A+  F      GI  D   L TV+   S+
Sbjct: 276 AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD---LLTVVSLTSI 332

Query: 374 CSNL---ELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            S L    +   + GF I+  +L  DV +G ALV++YAK G +  A  + D    K T  
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS 392

Query: 430 FNAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           +N +++G+ +  +A +  D   +  + R     P+  T+  ++   +    L +G  +HA
Sbjct: 393 WNTLVTGYTQNGLASEAIDAYNMMEECR--DTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             IK     DV V   LI +Y KCG ++ A  +F  I     V WNA++++  +HG G+ 
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF++M  E    D I+ + +L AC +SGL + G   F+ +++ YG++P L+H+ CMV
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMV 570

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGRAG L +A  L+ + P      +W  L+S  K+  N++   LAS RLL+++ ++ G
Sbjct: 571 DLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVG 630

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            ++L+SN+YA     +   KVR+   D  L K  G S + + SK   F    + HP+  E
Sbjct: 631 YYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTE 690

Query: 729 IYSKLDLLNDEMK 741
           IY +L +L+ +MK
Sbjct: 691 IYKELKVLSAKMK 703



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 237/494 (47%), Gaps = 15/494 (3%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F  +P ++K  +   D   G+ VH  + K G ++D F A +L++LY+++  LDVA K+F 
Sbjct: 124 FYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFV 180

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M V+   +W ++I G+  +G+    LG+   M     K +  T + IL  C+  +D I 
Sbjct: 181 DMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G  IH   +K G +++VFV  +LI+MY   G  ++A+ VF  +  +D+   N +I  Y +
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REIS 296
             +   A   F  +      P+  T  ++ S+  +       + + G  ++   + +++ 
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           +GNA+V MY K G    A  +FD +  ++ ISW  L++GY ++G   +AI+ +    +  
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEE-- 418

Query: 357 ICCDS----SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
            C D+        ++I   S    L+ G+++H   IK+    DV + T L+D+Y K G L
Sbjct: 419 -CRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRL 477

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           + A  L        +  +NAI++     I    E+ + LF       ++ D +TF  LLS
Sbjct: 478 EDAMSLFYEIPRDTSVPWNAIIASL--GIHGRGEEALQLFKDMLAERVKADHITFVSLLS 535

Query: 473 LSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDI 530
             +    +  G +       + G    +     ++ +  + G ++ A+++ + +    D 
Sbjct: 536 ACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595

Query: 531 VSWNAMLSAYALHG 544
             W A+LSA  ++G
Sbjct: 596 SIWGALLSACKIYG 609



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 189/393 (48%), Gaps = 27/393 (6%)

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
           D  F  + + C   + V   K+LH L + FG  + I +   ++ +Y  HG    +   FD
Sbjct: 22  DADFNALFNSC---VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA----TVIDGCSVCS 375
            I ++N+ SW ++IS YVR G   +A+N   +   +   C    L     T       C 
Sbjct: 79  YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSM---CGGGHLRPDFYTFPPILKACV 135

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +L  G ++H    K G+  DV +  +LV +Y++ G L  A  +      K    +NA++S
Sbjct: 136 SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS 195

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           GF +    +    + + ++ +  G++ D +T + +L + A    ++ G  +H + +K G 
Sbjct: 196 GFCQN--GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGL 253

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +DV V NALI MY+K G +  A  +F  +  RD+VSWN++++AY  +     AL  F+ 
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL---RPILEHFA----CMV 608
           M+  G  PD ++++ +    I+S LS+  I        I G    R  L+        +V
Sbjct: 314 MQLGGIRPDLLTVVSL--TSIFSQLSDQRIS-----RSILGFVIRREWLDKDVVIGNALV 366

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           ++  + G ++ A  + +  P  ++ + W TLV+
Sbjct: 367 NMYAKLGYMNCAHTVFDQLPRKDT-ISWNTLVT 398


>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 213/683 (31%), Positives = 355/683 (51%), Gaps = 23/683 (3%)

Query: 41  AYLCSISSVSCSERTLLFNDWPQLVKISIGS--GDL-----KLGQAVHAFLLKSGSQNDT 93
            ++C +S    S R L  N+   + +  IG+  GD      +L  +    ++ +    D 
Sbjct: 33  TWMCPLSF---STRQLTGNEVSMVEQKKIGNDLGDCSICLDELSPSNREIIITNPIYGDQ 89

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F    L+  Y+    L+ A+K+FD +     +   +++ GYL +  Y   + +   M R 
Sbjct: 90  FLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRC 149

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
             +F+ +TC+  L+AC  L D   G ++   A+  G     F+G+S+++    +G    A
Sbjct: 150 HLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCA 209

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
           +  F  +  KDV C N MI  + + G     +++F+ +L +  EP+  T  ++I  C E 
Sbjct: 210 QFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEM 269

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             +  GK +HG  + FG+ R+  V   ++ MY K G  E A  +F+ +  RNL+SW  +I
Sbjct: 270 RNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMI 329

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
           SGYV++G   + +  F + +   +  DS  + ++I  CS  ++L+ G  LHGF  + G  
Sbjct: 330 SGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLD 389

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
            ++ L TA+VD+YAK G L  A  + +    K    + A+L G  +       D + LF 
Sbjct: 390 LNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQN--GHARDALKLFD 447

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQAC-----LVRGRSLHAYSIKTGYAADVIVGNALITM 508
           Q     M+ + VTF+ L  +S    C     L  GRS+HA   +  +A++V+V  ALI M
Sbjct: 448 Q-----MQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDM 502

Query: 509 YAKCGSIDGAFQIFK-GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           YAKC  I+ A  +FK G++ +D++ +N+M+S Y +HGLG  AL ++  M REG  P++ +
Sbjct: 503 YAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNEST 562

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            + +L AC +SGL E GI LF  + + +   P  + +AC+VDLL RAGRL +A  LIN  
Sbjct: 563 FVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQM 622

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           PF+ +  +  TL++   L  + +  +  + RLL LE ++   +I +SN+YA     D   
Sbjct: 623 PFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVK 682

Query: 688 KVRTTMNDLRLSKEAGCSWIEID 710
            VR  M +  + K  G S IE++
Sbjct: 683 YVRGLMMEQEIKKIPGYSSIEVN 705


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 192/674 (28%), Positives = 346/674 (51%), Gaps = 14/674 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK    +   ++K+G  N+      LI+L+ KFN +  A ++F+ +  +  + + +++KG
Sbjct: 57  LKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKG 116

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE------DRIFGEQIHAFAIK 187
           Y  +    S L  A   Y  E    +    V+ +   LL+      D   G +IH   I 
Sbjct: 117 YAKN----STLRDAVRFY--ERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVIT 170

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
           +GF++N+F  T+++++Y       +A  +F  +  +D+   N ++  Y + G +  A  V
Sbjct: 171 NGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQV 230

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
            + +  +  +P+  T  +V+    +   +  G+ +HG A + G    ++V  A++  Y K
Sbjct: 231 VLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFK 290

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G    A  +F  +S RN++SW  +I GY ++G   +A   FL+ LD G+   +  +   
Sbjct: 291 CGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGA 350

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C+   +LE G  +H    +     DV +  +L+ +Y+K   +  A  +      K  
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV 410

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +NA++ G+ +    +E   + LF + +   ++PD  T   +++  A  +   + + +H
Sbjct: 411 VTWNAMILGYAQNGCVNE--ALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIH 468

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
             +I+T    +V V  ALI  +AKCG+I  A ++F  + +R +++WNAM+  Y  +G G+
Sbjct: 469 GLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGR 528

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL LF EM+     P++I+ L V+ AC +SGL E G+  F  +++ YGL P ++H+  M
Sbjct: 529 EALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAM 588

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VDLLGRAGRL +A   I   P      +   ++   ++  N +     +  L DL+P D 
Sbjct: 589 VDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDG 648

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
           G  +L++NMYA   M D+ A+VRT M    + K  GCS +E+ +++H F +   +HP+S+
Sbjct: 649 GYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSK 708

Query: 728 EIYSKLDLLNDEMK 741
            IY+ L+ L DEMK
Sbjct: 709 RIYAYLETLGDEMK 722



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 261/499 (52%), Gaps = 8/499 (1%)

Query: 49  VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           + C E   +  D+  L+++S  + DL+ G+ +H  ++ +G Q++ F    ++NLYAK  +
Sbjct: 133 MRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQ 192

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           ++ A K+F+ M  R  ++W +++ GY  +G     + +   M  + +K +  T   +L A
Sbjct: 193 IEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPA 252

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
            + L+    G  IH +A ++GFE  V V T+++  YF  G  R A  VF+G++ ++V   
Sbjct: 253 VADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSW 312

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAV 287
           N MI  Y + GESE AF  F+ +L    EP + +    +  C  NLG +E G+ +H L  
Sbjct: 313 NTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHAC-ANLGDLERGRYVHRLLD 371

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           +  +  ++SV N++++MY K    + A  +F  +  + +++W A+I GY ++G   +A+N
Sbjct: 372 EKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALN 431

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
            F E     I  DS  L +VI   +  S       +HG AI+     +V + TAL+D +A
Sbjct: 432 LFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHA 491

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           K G +++AR L D    ++   +NA++ G+         + + LF++ +   ++P+ +TF
Sbjct: 492 KCGAIQTARKLFDLMQERHVITWNAMIDGY--GTNGHGREALDLFNEMQNGSVKPNEITF 549

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGI 525
             +++ + S + LV     +  S+K  Y  +  + +  A++ +  + G +D A++  + +
Sbjct: 550 LSVIA-ACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDM 608

Query: 526 SDRD-IVSWNAMLSAYALH 543
             +  I    AML A  +H
Sbjct: 609 PVKPGITVLGAMLGACRIH 627



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 234/473 (49%), Gaps = 18/473 (3%)

Query: 159 EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR 218
            H  +++LE C+ L++     QI    IK+GF N     T LIS++       EA  VF 
Sbjct: 44  RHPSAILLELCTSLKEL---HQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFE 100

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            + +K     + M+  Y K      A   +  +   +  P  Y FT ++ +  ENL +  
Sbjct: 101 PVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRR 160

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G+++HG+ +  G    +    A+V +Y K    E+A +MF+ + +R+L+SW  +++GY +
Sbjct: 161 GREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQ 220

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G   +A+   L+  + G   DS  L +V+   +    L +G  +HG+A + G+   V +
Sbjct: 221 NGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNV 280

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
            TA++D Y K G ++SAR++  G S +    +N ++ G+ +    + E+    F +    
Sbjct: 281 ATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQN--GESEEAFATFLKMLDE 338

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G+EP  V+    L   A+   L RGR +H    +     DV V N+LI+MY+KC  +D A
Sbjct: 339 GVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIA 398

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             +F  +  + +V+WNAM+  YA +G    AL LF EM+     PD  +++ V+ A    
Sbjct: 399 ASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITAL--- 455

Query: 579 GLSEGGICLFNEIEQIYGL--RPILEH--FAC--MVDLLGRAGRLSEAMNLIN 625
                 + +  + + I+GL  R +++   F C  ++D   + G +  A  L +
Sbjct: 456 ----ADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFD 504


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 189/554 (34%), Positives = 298/554 (53%), Gaps = 5/554 (0%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF--RGLAYKDVRCVNFMILEYNK 237
           QIH   I + + +  F+  +LI++Y   GC  +A  +F      +K +     +I   + 
Sbjct: 163 QIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSH 222

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
                 A  +F  +  S   PN +TF++++S     + V  G+QLH L  K G    I V
Sbjct: 223 FNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFV 282

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-DLG 356
           G A+V MY K      A R+FD + ERNL+SW ++I G+  +    +A+  F + L +  
Sbjct: 283 GTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKT 342

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  +   +++V+  C+    L  G Q+HG  +K+G +    +  +L+D+Y K        
Sbjct: 343 VIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGV 402

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            L      +    +N ++ GF++   D  E+    F   R  G+ PD  +FS +L  SAS
Sbjct: 403 KLFQCVGDRDVVTWNVLVMGFVQN--DKFEEACNYFWVMRREGILPDEASFSTVLHSSAS 460

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
            A L +G ++H   IK GY  ++ +  +LITMYAKCGS+  A+Q+F+GI D +++SW AM
Sbjct: 461 LAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAM 520

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +SAY LHG     + LFE M  EG  P  ++ + VL AC ++G  E G+  FN +++I+ 
Sbjct: 521 ISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHD 580

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P  EH+ACMVDLLGRAG L EA   I S P   +P +W  L+   +   N K    A+
Sbjct: 581 MNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAA 640

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           +RL ++EP + G+++L++NM    G L+EA +VR  M    + KE GCSWI++ +    F
Sbjct: 641 ERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVF 700

Query: 717 VASGKDHPESEEIY 730
            A  + H  S+EIY
Sbjct: 701 TAHDRSHSSSDEIY 714



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 263/555 (47%), Gaps = 24/555 (4%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD--GML 120
            L+  +I +  LK    +H  ++ +   +  F  NNLINLYAK   L+ A  LF      
Sbjct: 147 HLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHH 206

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            ++ +TWTSLI        +   L +   M  S    N+ T S IL A +     + G+Q
Sbjct: 207 FKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQ 266

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H+   K GF+ N+FVGT+L+ MY        A  VF  +  +++   N MI+ +     
Sbjct: 267 LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326

Query: 241 SEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
            + A  VF  +L      PN+ + ++V+S C    G+  G+Q+HG+ VK+G+V    V N
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMN 386

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +++ MY K    +E  ++F  + +R++++W  L+ G+V++    +A N F      GI  
Sbjct: 387 SLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILP 446

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D +  +TV+   +  + L  G  +H   IK GY+ ++ +  +L+ +YAK G L  A  + 
Sbjct: 447 DEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVF 506

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +G        + A++S +  ++      V+ LF      G+EP  VTF  +LS  +    
Sbjct: 507 EGIEDHNVISWTAMISAY--QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGR 564

Query: 480 LVRGRSLHAYSIKTGYAADVIVGN----ALITMYAKCGSIDGAFQIFKGISDRDIVS-WN 534
           +  G + H  S+K  +  D+  G      ++ +  + G +D A +  + +  +   S W 
Sbjct: 565 VEEGLA-HFNSMKKIH--DMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWG 621

Query: 535 AMLSAYALHG---LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           A+L A   +G   +G+ A     EM  E + P +  +L  +  C  SG  E      NE+
Sbjct: 622 ALLGACRKYGNLKMGREAAERLFEM--EPYNPGNYVLLANM--CTRSGRLEEA----NEV 673

Query: 592 EQIYGLRPILEHFAC 606
            ++ G+  + +   C
Sbjct: 674 RRLMGVNGVRKEPGC 688



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 4/176 (2%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
            + LL+ +     L     +H   I   Y +   + N LI +YAKCG ++ A  +F    
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204

Query: 527 D--RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
              + IV+W ++++  +   +   AL LF +M+  G  P+  +   +L A   + +   G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
             L + I + +G    +     +VD+  +   +  A+ + +  P   + + W +++
Sbjct: 265 QQLHSLIHK-HGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMI 318


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 207/673 (30%), Positives = 347/673 (51%), Gaps = 17/673 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA LL  G   +   +  LINLY     + +++  FD +  ++  +W S+I  Y+  
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 138 GDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           G Y   +     ++        + + +T   IL+AC  L D   G+++H    K GFE++
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VFV  SL+ +Y   G    A  VF  +  KDV   N MI  + + G +  A  V   +  
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              + +  T  +++ VC ++  V  G  +H   +K G+  ++ V NA++ MY K G  ++
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+ +FD +  R+L+SW ++I+ Y ++     A+  F      GI  D   L TV+   S+
Sbjct: 276 AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD---LLTVVSLTSI 332

Query: 374 CSNL---ELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            S L    +   + GF I+  +L  DV +G ALV++YAK G +  A  + D    K T  
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS 392

Query: 430 FNAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           +N +++G+ +  +A +  D   +  + R     P+  T+  ++   +    L +G  +HA
Sbjct: 393 WNTLVTGYTQNGLASEAIDAYNMMEECR--DTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             IK     DV V   LI +Y KCG ++ A  +F  I     V WNA++++  +HG G+ 
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF++M  E    D I+ + +L AC +SGL + G   F+ +++ YG++P L+H+ CMV
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMV 570

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGRAG L +A  L+ + P      +W  L+S  K+  N++   LAS RLL+++ ++ G
Sbjct: 571 DLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVG 630

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            ++L+SN+YA     +   KVR+   D  L K  G S + + SK   F    + HP+  E
Sbjct: 631 YYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTE 690

Query: 729 IYSKLDLLNDEMK 741
           IY +L +L+ +MK
Sbjct: 691 IYKELKVLSAKMK 703



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 237/494 (47%), Gaps = 15/494 (3%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F  +P ++K  +   D   G+ VH  + K G ++D F A +L++LY+++  LDVA K+F 
Sbjct: 124 FYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFV 180

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M V+   +W ++I G+  +G+    LG+   M     K +  T + IL  C+  +D I 
Sbjct: 181 DMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G  IH   +K G +++VFV  +LI+MY   G  ++A+ VF  +  +D+   N +I  Y +
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REIS 296
             +   A   F  +      P+  T  ++ S+  +       + + G  ++   + +++ 
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           +GNA+V MY K G    A  +FD +  ++ ISW  L++GY ++G   +AI+ +    +  
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEE-- 418

Query: 357 ICCDS----SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
            C D+        ++I   S    L+ G+++H   IK+    DV + T L+D+Y K G L
Sbjct: 419 -CRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRL 477

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           + A  L        +  +NAI++     I    E+ + LF       ++ D +TF  LLS
Sbjct: 478 EDAMSLFYEIPRDTSVPWNAIIASL--GIHGRGEEALQLFKDMLAERVKADHITFVSLLS 535

Query: 473 LSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDI 530
             +    +  G+       K  G    +     ++ +  + G ++ A+++ + +    D 
Sbjct: 536 ACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595

Query: 531 VSWNAMLSAYALHG 544
             W A+LSA  ++G
Sbjct: 596 SIWGALLSACKIYG 609



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 189/394 (47%), Gaps = 27/394 (6%)

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
            D  F  + + C   + V   K+LH L + FG  + I +   ++ +Y  HG    +   F
Sbjct: 21  KDADFNALFNSC---VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTF 77

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA----TVIDGCSVC 374
           D I ++N+ SW ++IS YVR G   +A+N   +   +   C    L     T       C
Sbjct: 78  DYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSM---CGGGHLRPDFYTFPPILKAC 134

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
            +L  G ++H    K G+  DV +  +LV +Y++ G L  A  +      K    +NA++
Sbjct: 135 VSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMI 194

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           SGF +    +    + + ++ +  G++ D +T + +L + A    ++ G  +H + +K G
Sbjct: 195 SGFCQN--GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             +DV V NALI MY+K G +  A  +F  +  RD+VSWN++++AY  +     AL  F+
Sbjct: 253 LDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFK 312

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL---RPILEHFA----CM 607
            M+  G  PD ++++ +    I+S LS+  I        I G    R  L+        +
Sbjct: 313 GMQLGGIRPDLLTVVSL--TSIFSQLSDQRIS-----RSILGFVIRREWLDKDVVIGNAL 365

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           V++  + G ++ A  + +  P  ++ + W TLV+
Sbjct: 366 VNMYAKLGYMNCAHTVFDQLPRKDT-ISWNTLVT 398


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 218/733 (29%), Positives = 377/733 (51%), Gaps = 53/733 (7%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           + +S  SGD  L + VHA LLK   + DT  +N LI+ Y K N    A +LF  +   + 
Sbjct: 71  LHVSSRSGDTHLAKTVHATLLKR-DEEDTHLSNALISTYLKLNLFPHALRLFLSLPSPNV 129

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACS-LLEDRIFGEQIH 182
           +++T+LI  +L        L +   M  RS    NE+T   +L ACS LL    FG Q+H
Sbjct: 130 VSYTTLI-SFLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLH 188

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A A+K+   ++ FV  +L+S+Y     F  A  +F  +  +D+   N +I    +    +
Sbjct: 189 AAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYD 248

Query: 243 MAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
            AF +F ++ ++D F  +D+T + +++    +  + EG+Q+H  AVK G+  +++VGN +
Sbjct: 249 TAFRLFRNMQATDAFRVDDFTLSILLTA---SASLMEGQQVHAHAVKLGLETDLNVGNGL 305

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYV------------------------ 337
           +  Y K G  ++ E +F+ +  R++I+WT +++ Y+                        
Sbjct: 306 IGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYN 365

Query: 338 -------RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
                  R+  G +A+  F+  ++ G+      L +V+D C +  + ++  Q+HGFA+K 
Sbjct: 366 TVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKF 425

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSA-----RMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
           G+ S+  +  AL+D+Y + G +  A     R  L+ FS   +  + A++ G+        
Sbjct: 426 GFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFS---SVVWTAMICGYARN--GQP 480

Query: 446 EDVMVLFSQQRLAG-MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
           E+ + LF   R  G +  D V  + +L L  +   L  G+ +H + IK G   ++ VGNA
Sbjct: 481 EEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNA 540

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           +++MY KCGS+D A ++F  +   DIV+WN ++S   +H  G  AL ++ EM  EG  P+
Sbjct: 541 VVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPN 600

Query: 565 DISILGVLQACIYSGLSEGGIC--LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMN 622
            ++ + ++ A   + L+    C  LFN +  +Y + P   H+A  + +LG  G L EA+ 
Sbjct: 601 QVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISVLGHWGLLQEALE 660

Query: 623 LINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGM 682
            IN+ PF  S L+WR L+   +L  N      A++ +L LEPKD  +FILVSN+Y+  G 
Sbjct: 661 TINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILALEPKDPSTFILVSNLYSASGR 720

Query: 683 LDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE-MK 741
            D +  VR  M +    K    SWI  + K++ F    + HP+ ++I   L++L  E +K
Sbjct: 721 WDRSEMVREDMREKGFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDIQRGLEILILECLK 780

Query: 742 LKVKDSSAFELQD 754
           +  +  ++F L +
Sbjct: 781 IGYEPDTSFVLHE 793


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 227/762 (29%), Positives = 372/762 (48%), Gaps = 40/762 (5%)

Query: 8   NLLQPPFKSQQS---LPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQL 64
           ++L P  KS+ +   LPP ++  PI  FS    S        SS     +    N+    
Sbjct: 74  HILAPTLKSRYTSKFLPPRRR--PIQLFSAARSSP-----QFSSYGLGNQ----NEEIDF 122

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
             +   S      + +HA L+ +G     F +  L+NLYA    + +++  FD +  +  
Sbjct: 123 NFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDV 182

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             W S+I  Y+ +G +   +G    +   SE + + +T   +L+AC  L D   G +IH 
Sbjct: 183 YAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHC 239

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           +A K GF+ NVFV  SLI MY   G    A ++F  + ++D+   N MI    + G +  
Sbjct: 240 WAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 299

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  V   +     + N  T  +++ VC +   +     +H   +K G+  ++ V NA++ 
Sbjct: 300 ALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALIN 359

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVR-----SGHG---GKAINGFL-EFLD 354
           MY K G  E+A + F  +   +++SW ++I+ Y +     + HG      +NGF  + L 
Sbjct: 360 MYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLK 413
           L        LA+++     C N      +HGF ++ G+L  DV +G A+VD+YAK G L 
Sbjct: 420 L------VSLASIVAQSRDCKN---SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           SA  + +    K    +N +++G+ +      E + V    +    + P+  T+  +L  
Sbjct: 471 SAHKVFEIIPVKDVISWNTLITGYAQN-GLASEAIEVYKMMEECKEIIPNQGTWVSILPA 529

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            A    L +G  +H   IKT    DV V   LI +Y KCG +  A  +F  +     V+W
Sbjct: 530 YAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTW 589

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           NA++S + +HG  +  L LF EM  EG  PD ++ + +L AC +SG  E G   F  +++
Sbjct: 590 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 649

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            YG++P L+H+ CMVDLLGRAG L  A + I   P      +W  L+   ++  N +   
Sbjct: 650 -YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGK 708

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
            AS RL +++ K+ G ++L+SN+YA  G  +   KVR+   +  L K  G S IE++ K+
Sbjct: 709 FASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKV 768

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
             F    + HP+ +EIY +L +L  +MK L      +F LQD
Sbjct: 769 DVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQD 810


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 188/587 (32%), Positives = 319/587 (54%), Gaps = 7/587 (1%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI--SMYFHSGCFREAE 214
           F E+  ++ILE C  + D     +IHA  IK+       V  +L+  +          A 
Sbjct: 22  FPENPKTLILEQCKTIRDL---NEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAV 78

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
           ++FR +   D    N MI  +        A  +F  +  +  +P+++TF  ++ VC    
Sbjct: 79  SIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQ 138

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
            + EG+Q+H L +K G      V N ++ MY   G  E A R+FD +SERN+ +W ++ +
Sbjct: 139 ALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFA 198

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           GY +SG+  + +  F E L+L I  D   L +V+  C   ++LELG  ++ +  + G   
Sbjct: 199 GYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKG 258

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +  L T+LVD+YAK G + +AR L D    +    ++A++SG+ +  A    + + LF +
Sbjct: 259 NPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQ--ASRCREALDLFHE 316

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            + A ++P+ +T   +LS  A    L  G+ +H +  K      V +G AL+  YAKCGS
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGS 376

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           ++ + ++F  +  ++++SW  ++   A +G GK AL  F  M  +   P+D++ +GVL A
Sbjct: 377 VESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C ++GL + G  LF  + + +G+ P +EH+ CMVD+LGRAG + EA   I + P   + +
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAV 496

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           +WRTL++  K+  N +    + K+L+ LEP  +G +IL+SN+YA  G  ++A KVR  M 
Sbjct: 497 IWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMK 556

Query: 695 DLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +  + K  GCS IE+D  +H F A    H +SEEIY+ ++ +  ++K
Sbjct: 557 EKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIK 603



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 241/535 (45%), Gaps = 40/535 (7%)

Query: 19  SLPPLKKKVP-----INTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGD 73
           +LP L  K P     I+ F  NPK+ +   C                             
Sbjct: 4   TLPLLPAKTPTAKTSISLFPENPKTLILEQCKT--------------------------- 36

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF--NRLDVAQKLFDGMLVRSAITWTSLI 131
           ++    +HA L+K+        A NL+   A      +D A  +F  +    +  +  +I
Sbjct: 37  IRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMI 96

Query: 132 KGY-LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           +G+ L    +E++L +  +M+ +  + +E T   IL+ CS L+    GEQIHA  +K GF
Sbjct: 97  RGFTLKQSPHEAIL-LFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGF 155

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            ++ FV  +LI MY + G    A  VF  ++ ++VR  N M   Y K+G  E    +F  
Sbjct: 156 GSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHE 215

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +L  D   ++ T  +V++ C     +E G+ ++    + G+    ++  ++V MY K G 
Sbjct: 216 MLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQ 275

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            + A R+FD +  R++++W+A+ISGY ++    +A++ F E     I  +   + +++  
Sbjct: 276 VDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSS 335

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+V   LE G  +H F  K      V LGTAL+D YAK G ++S+  +      K    +
Sbjct: 336 CAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSW 395

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH-AY 489
             ++ G         +  +  F       +EP+ VTF  +LS  +    +  GR L  + 
Sbjct: 396 TVLIQGLASN--GQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSM 453

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           S   G    +     ++ +  + G I+ AFQ  K +    + V W  +L++  +H
Sbjct: 454 SRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVH 508


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 187/613 (30%), Positives = 331/613 (53%), Gaps = 3/613 (0%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           +N+LI++Y+K   + +A ++FD M V+  I+W +++ GY+  G Y  VL +  +M R   
Sbjct: 265 SNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHI 324

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           K N+ +    + A +   D   G+++H +A++ G  +++ V T ++SMY   G  ++A+ 
Sbjct: 325 KMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKE 384

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
            F  L  +D+   +  +    +AG    A  +F  +     +P+    ++++S C E   
Sbjct: 385 FFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISS 444

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
              GK +H   +K  +  +ISV   +V+MY +      A  +F+ +  +++++W  LI+G
Sbjct: 445 SRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLING 504

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           + + G    A+  FL     G+  DS  + +++  C++  +L LG+  HG  IK+G  S+
Sbjct: 505 FTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESE 564

Query: 396 VRLGTALVDIYAKGGDLKSARMLLD-GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           + +  AL+D+YAK G L +A  L       K    +N +++G++     +E   +  F+Q
Sbjct: 565 MHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANE--AISTFNQ 622

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            +L  + P+ VTF  +L   +  + L    + HA  I+ G+ +  ++GN+LI MYAK G 
Sbjct: 623 MKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQ 682

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +  + + F  + ++  +SWNAMLS YA+HG G+ AL LF  M+      D +S + VL A
Sbjct: 683 LSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSA 742

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C ++GL + G  +F  + + + L P +EH+ACMVDLLG AG   E + LI+  P      
Sbjct: 743 CRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQ 802

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           +W  L+   K+ +N K   +A   LL LEP++A  +I++S++YA  G   +A + R+ M 
Sbjct: 803 VWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMT 862

Query: 695 DLRLSKEAGCSWI 707
           D  L K  G SW+
Sbjct: 863 DHGLKKNPGYSWV 875



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 168/644 (26%), Positives = 302/644 (46%), Gaps = 27/644 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G+ D   G A+H  +     + D F    L+++Y K   LD A+K+FD M  + 
Sbjct: 133 VLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKD 192

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV--ILEACSLLEDRIFGEQI 181
             +W ++I G     +    L I   M + EE     + S+  +  A S LED    + I
Sbjct: 193 VASWNAMISGLSQSSNPCEALEIFQRM-QMEEGVEPDSVSILNLAPAVSRLEDVDSCKSI 251

Query: 182 HAFAIKSGFENNVF--VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           H + ++      VF  V  SLI MY   G  + A  +F  +  KD      M+  Y   G
Sbjct: 252 HGYVVR----RCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHG 307

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
                  +   +     + N  +  N +    E   +E+GK++H  A++ G+  +I V  
Sbjct: 308 CYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVAT 367

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            IV+MY K G  ++A+  F ++  R+L+ W+A +S  V++G+ G+A++ F E    G+  
Sbjct: 368 PIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKP 427

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D + L++++  C+  S+  LG  +H + IK    SD+ + T LV +Y +      A  L 
Sbjct: 428 DKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLF 487

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    K    +N +++GF +    D    + +F + +L+G++PD  T   LLS  A    
Sbjct: 488 NRMHYKDVVAWNTLINGFTK--CGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDD 545

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI---DGAFQIFKGISDRDIVSWNAM 536
           L  G   H   IK G  +++ V  ALI MYAKCGS+   +  F + K + D   VSWN M
Sbjct: 546 LYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDE--VSWNVM 603

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++ Y  +G    A+  F +MK E   P+ ++ + +L A  Y  +    +     I ++  
Sbjct: 604 IAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGF 663

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL-----MANSKF 651
           +   L   + ++D+  ++G+LS +    +    ++  + W  ++S   +     +A + F
Sbjct: 664 ISSTLIGNS-LIDMYAKSGQLSYSEKCFHEME-NKGTISWNAMLSGYAMHGQGEVALALF 721

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           S++    +    P D+ S+I V +     G++ E   +  +M +
Sbjct: 722 SLMQETHV----PVDSVSYISVLSACRHAGLIQEGRNIFQSMTE 761



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/576 (25%), Positives = 264/576 (45%), Gaps = 19/576 (3%)

Query: 97  NNLINLYAKFNRLDVAQKLF--DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE 154
           N L+ ++A   RL V Q     + +   S I W SLI+ Y     ++  +     M    
Sbjct: 66  NPLLQIHA---RLIVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMG 122

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
            + +++T + +L+AC+   D   G  IH        E +VF+GT L+ MY   G    A 
Sbjct: 123 LEPDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNAR 182

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL-LSSDFEPNDYTFTNVISVCYEN 273
            VF  +  KDV   N MI   +++     A  +F  + +    EP+  +  N+       
Sbjct: 183 KVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRL 242

Query: 274 LGVEEGKQLHGLAVK---FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
             V+  K +HG  V+   FGV     V N+++ MY K G  + A ++FD +  ++ ISW 
Sbjct: 243 EDVDSCKSIHGYVVRRCVFGV-----VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWA 297

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
            +++GYV  G   + +    E     I  +   +   +   +   +LE G ++H +A++ 
Sbjct: 298 TMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQL 357

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G  SD+ + T +V +YAK G+LK A+        +    ++A LS  ++  A    + + 
Sbjct: 358 GMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQ--AGYPGEALS 415

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           +F + +  G++PD    S L+S  A  +    G+ +H Y IK    +D+ V   L++MY 
Sbjct: 416 IFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYT 475

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           +C S   A  +F  +  +D+V+WN +++ +   G  + AL +F  ++  G  PD  +++ 
Sbjct: 476 RCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVS 535

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           +L AC        GIC    I +  G+   +     ++D+  + G L  A NL + +   
Sbjct: 536 LLSACALLDDLYLGICFHGNIIK-NGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHV 594

Query: 631 ESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEP 664
           +  + W  +++  +    AN   S     +L  + P
Sbjct: 595 KDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRP 630



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 226/484 (46%), Gaps = 8/484 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+ G+ VH + L+ G  +D   A  ++++YAK   L  A++ F  +  R  + W++ + 
Sbjct: 343 DLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLS 402

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
             +  G     L I  +M     K ++   S ++ AC+ +     G+ +H + IK+   +
Sbjct: 403 ALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGS 462

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           ++ V T+L+SMY     F  A  +F  + YKDV   N +I  + K G+  +A  +F+ L 
Sbjct: 463 DISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQ 522

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            S  +P+  T  +++S C     +  G   HG  +K G+  E+ V  A++ MY K G   
Sbjct: 523 LSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLC 582

Query: 313 EAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            AE +F      ++ +SW  +I+GY+ +G   +AI+ F +     +  +     T++   
Sbjct: 583 TAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAV 642

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S  S L   +  H   I+ G++S   +G +L+D+YAK G L  +         K T  +N
Sbjct: 643 SYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWN 702

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-HAYS 490
           A+LSG+   +    E  + LFS  +   +  D V++  +LS       +  GR++  + +
Sbjct: 703 AMLSGY--AMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMT 760

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIF-KGISDRDIVSWNAMLSAYALHG---LG 546
            K      +     ++ +    G  D    +  K  ++ D   W A+L A  +H    LG
Sbjct: 761 EKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLG 820

Query: 547 KGAL 550
           + AL
Sbjct: 821 EIAL 824


>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
          Length = 697

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 203/645 (31%), Positives = 338/645 (52%), Gaps = 31/645 (4%)

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL-----------GIACDMYRSEEK 156
           +L VA+++FD M  R   +WT+++KGY+     E  L           G++ D Y     
Sbjct: 43  KLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTY----- 97

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
                 SV L+AC    +  +GE +HA+A K+   ++VFVG++L+ MY   G   ++  V
Sbjct: 98  ----VLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRV 153

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL-----LSSDFEPNDYTFTNVISVCY 271
           F  + +++       I     AG        F  +     LSSD     + F   +  C 
Sbjct: 154 FAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSD----TFAFAIALKACA 209

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
           +   V+ G+++H   +  G    + V N++ TMY + G  ++  R+F+++SER+++ WT+
Sbjct: 210 DLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTS 269

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           LI+ Y+R G   KA+N FL   +  +  +    A+    C+  S L  G QLHG     G
Sbjct: 270 LITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLG 329

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
               + +  +++ +Y+    L SA +L  G  C+    ++ I+ G+ +  A   E+    
Sbjct: 330 LGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQ--AAFGEECFKY 387

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           FS  R AG +P     + LLS+S   A L +GR +HA ++  G   +  + +ALI MY+K
Sbjct: 388 FSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSK 447

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           CGSI  A ++F+     DIVS  AM++ YA HG  + A+ LFE+  +  F PDD++ + V
Sbjct: 448 CGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISV 507

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
           L AC +SG  + G   FN +++ Y +RP  EH+ CMVDLL RAGRL++A  +IN  P+ +
Sbjct: 508 LTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKK 567

Query: 632 SPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
             ++W TL+   K   + +    A++R+L+L+P    + + ++N+++  G   EAA VR 
Sbjct: 568 DDVVWTTLLRACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRK 627

Query: 692 TMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
            M    + KE G S I I  ++  F +    HP+SE++ S L+L+
Sbjct: 628 DMKSKGVIKEPGWSSILIKDQVSAFASGSLSHPQSEDVCSILELV 672



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 193/403 (47%), Gaps = 8/403 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           +K G+ +H  ++  G     + AN+L  +Y +   +    +LF+ M  R  + WTSLI  
Sbjct: 214 VKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITA 273

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+  G  E  +     M  S+   NE T +    AC+ L   ++GEQ+H      G  ++
Sbjct: 274 YIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDS 333

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + V  S++ MY        A  +F+G+  +D+   + +I  Y++A   E  F  F  +  
Sbjct: 334 LSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQ 393

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +  +P D+   +++SV      +E+G+Q+H LA+  G+ +  ++ +A++ MY K G   E
Sbjct: 394 AGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIE 453

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++F+     +++S TA+I+GY   G   +AI+ F + L L    D     +V+  CS 
Sbjct: 454 ASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSH 513

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYAKGGDLKSARMLLDGFSCKY-TAEFN 431
              L+LG Q      ++  +   +     +VD+  + G L  A  +++    K     + 
Sbjct: 514 SGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWT 573

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            +L    EK  D E       + QR+  +E DP +F+ L++L+
Sbjct: 574 TLLRACKEK-GDVERGRR---AAQRI--LELDPTSFTTLVTLA 610



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 7/235 (2%)

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL--AGMEPDPVTF 467
           G L+ AR + D    +    + AI+ G++   A   E+ ++LFS  R+   G+  D    
Sbjct: 42  GKLRVARQVFDKMPRRDIKSWTAIMKGYVA--ATKPEEALILFSAMRVDPLGVSGDTYVL 99

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           S  L      + +  G SLHAY+ KT   + V VG+AL+ MY + G ID + ++F  +  
Sbjct: 100 SVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPF 159

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKR-EGFAPDDISILGVLQACIYSGLSEGGIC 586
           R+ V+W A ++     GL    L  F +M R +  + D  +    L+AC      + G  
Sbjct: 160 RNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGRE 219

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +   +  + G   IL     +  +    G + + + L  S       +LW +L++
Sbjct: 220 IHTHV-IVKGFAAILWVANSLATMYTECGEMQDGLRLFESMS-ERDVVLWTSLIT 272


>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 209/692 (30%), Positives = 359/692 (51%), Gaps = 13/692 (1%)

Query: 53  ERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVA 112
            R+ L  D   L  +  G G L+  +  H   LK G  N  F  + L++ YAK   +D A
Sbjct: 113 RRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNG-FVVSGLLDGYAKLGDVDSA 171

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM--YRSEEKFNEHTCSVILEACS 170
           +K F    +  ++ WT+++ G++ +G++E    +  +M       + NE + + +L A  
Sbjct: 172 EKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGA-- 229

Query: 171 LLEDRIFGEQIHAFAIKSGF--ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
            L D   GEQ+   ++K G     ++ +  +L++MY   G   +A  +F  +   DV   
Sbjct: 230 -LSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSW 288

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
              I     A ++  AF +F  +LS + E N+Y   NV+S   E   ++ G+Q+ GL  K
Sbjct: 289 TERI---GAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQK 345

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G +   SV NA++ MYGK G    A  +FD +   + +SW +LI+GY  +G   +A+  
Sbjct: 346 AGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKV 405

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F +  D  +  +   LA++++  +  +  E  +Q+H + +K G++ D  + + L+  Y K
Sbjct: 406 FSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGK 465

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
              +  ++ +    S       NA+ +  +   A    D + LF        E D +T S
Sbjct: 466 CNMICESKRVYSDISQINVLHLNAMAATLVH--AGCHADALKLFQTGWRLHQEVDCITLS 523

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L    +   L  GR++H+ ++K+G + D  V +A+I +Y KCG++D A + F  +S  
Sbjct: 524 IVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKN 583

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           ++V+WNAM+  YA HG       LF +M   G  PD+I+ LGVL +C ++GL        
Sbjct: 584 NLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYL 643

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
           + + +++G+ P LEH+ACM+DL GR G L +A   I+  P      +W+ L+S   +  N
Sbjct: 644 SSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGN 703

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
                +A+K+L++L+P++  +++L+SN+YA  G  +   K+R  M    + KE G SWI+
Sbjct: 704 VDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQ 763

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           +   +H+F AS   HPES+EIY KL  L +EM
Sbjct: 764 VRGSVHYFFASDTSHPESKEIYMKLQRLYEEM 795



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 247/532 (46%), Gaps = 23/532 (4%)

Query: 52  SERTLLFND-WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD 110
           S +TL+    +PQ ++ S       L    +A  LKSG   D F ++ ++N +A      
Sbjct: 13  SIKTLVLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFA 72

Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
            A++          ++W SLI GY        V  +   + RS    +E + S +++ C 
Sbjct: 73  RARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCG 132

Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
           +LE     E  H   +K G  N  FV + L+  Y   G    AE  F+     D      
Sbjct: 133 VLEQN---EVAHGVCLKMGLLNG-FVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTA 188

Query: 231 MILEYNKAGESEMAFHVFVHL--LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           M+  +   GE E    VFV +  L    E N+++ T+V+    +   V EG+Q+ GL+VK
Sbjct: 189 MVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSD---VREGEQVFGLSVK 245

Query: 289 FGVV--REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI 346
            G++    I + NA++ MY + G   +A +MFD ++E +++SWT       R G    AI
Sbjct: 246 MGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTE------RIGAAYDAI 299

Query: 347 NGFLEF---LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
             F  F   L   +  +   L  V+        L+ G Q+ G   K GYL    +  AL+
Sbjct: 300 EAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALI 359

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
            +Y K G++ +AR + D   C  +  +N++++G+ E      +  + +FSQ R   ++P+
Sbjct: 360 FMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAEN--GLMKQALKVFSQMRDYLLQPN 417

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
             T + +L ++A+     +   +H+Y +K G+  D  + + LIT Y KC  I  + +++ 
Sbjct: 418 KYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYS 477

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            IS  +++  NAM +     G    AL LF+   R     D I++  VL+AC
Sbjct: 478 DISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKAC 529



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 206/449 (45%), Gaps = 23/449 (5%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q +A  +KSGF  + F+ + +++ +  SG F  A        Y D    N +I  Y + 
Sbjct: 40  DQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARF 99

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREISV 297
            +    F +F  L  S   P++++ ++++  C    GV E+ +  HG+ +K G++    V
Sbjct: 100 RQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGC----GVLEQNEVAHGVCLKMGLLNGFVV 155

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF--LDL 355
            + ++  Y K G  + AE+ F      + + WTA++ G+V +G   K    F+E   L L
Sbjct: 156 -SGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGL 214

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL--SDVRLGTALVDIYAKGGDLK 413
           G+  +   L +V+      S++  G Q+ G ++K G L    + L  AL+++Y++ G   
Sbjct: 215 GLELNEFSLTSVL---GALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKS 271

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKI--ADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
            A  + D  +          +  + E+I  A D  +   LF       ME +      +L
Sbjct: 272 DAIKMFDEMT-------EPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVL 324

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           S       L  GR +     K GY     V NALI MY KCG +  A  IF  +   D V
Sbjct: 325 SAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSV 384

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           SWN++++ YA +GL K AL +F +M+     P+  ++  +L+    S   E  + + + I
Sbjct: 385 SWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYI 444

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            ++ G        +C++   G+   + E+
Sbjct: 445 VKL-GFIVDDSMLSCLITAYGKCNMICES 472


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 208/728 (28%), Positives = 374/728 (51%), Gaps = 40/728 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+++S   GD  L +AVHA  LK   + D F  N LI+ Y K   +  A K+F G+   +
Sbjct: 103 LLRLSTRYGDPDLARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPN 160

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++T+LI G+      +  + +   M  S  + NE+T   IL AC    D   G Q+H 
Sbjct: 161 VVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHG 220

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G  + VF+  +L+ +Y   G       +F  +  +D+   N +I    K  + + 
Sbjct: 221 IVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280

Query: 244 AFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           AF  F  + L    + + ++ + +++ C  ++   +G+QLH LA+K G+   +SV ++++
Sbjct: 281 AFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLI 340

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYV------------------------- 337
             Y K G + +   +F+ +  R++I+WT +I+ Y+                         
Sbjct: 341 GFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA 400

Query: 338 ------RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
                 R+  G +A+  F+E L+ G+      L ++I  C +  + ++  Q+ GF +K G
Sbjct: 401 VLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFG 460

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK--YTAEFNAILSGFMEKIADDEEDVM 449
            LS+  + TALVD+Y + G ++ A  +    S +  YTA   +++ G+        E + 
Sbjct: 461 ILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARN-GKLNEAIS 519

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
           +  S Q    +  D V  + +LSL  S      G+ +H +++K+G   +  VGNA ++MY
Sbjct: 520 LFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMY 579

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           +KC ++D A ++F  ++ +DIVSWN +++ + LH  G  AL ++++M++ G  PD I+  
Sbjct: 580 SKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFA 639

Query: 570 GVLQACIYSGLSEGGIC--LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            ++ A  ++ L+    C  LF  +E  + ++P LEH+A  + +LGR G L EA   I + 
Sbjct: 640 LIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNM 699

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           P      +WR L++  ++  N +   LA++ +L +EPKD  S+IL SN+Y+  G    + 
Sbjct: 700 PLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSE 759

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE-MKLKVKD 746
           KVR  M +    K    SWI  ++K+H F A  + HP+ ++IYS L++L  E +K+    
Sbjct: 760 KVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVP 819

Query: 747 SSAFELQD 754
            ++F LQ+
Sbjct: 820 DTSFVLQE 827


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 202/675 (29%), Positives = 356/675 (52%), Gaps = 10/675 (1%)

Query: 74  LKLGQAVHAFLLKSGSQN-----DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           L  G+ VH  LL S +++     +T  +N+LI +Y +    D A+ +FDGML R+ ++W 
Sbjct: 58  LPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWA 117

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++I  +  +      +G+   M RS    ++      + ACS L D   G Q+HA AIK 
Sbjct: 118 AVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKW 177

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
              +++ V  +L++MY  SG   +   +F  +  KD+     +I    + G    A  +F
Sbjct: 178 ESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIF 237

Query: 249 VHLLSSDFE-PNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
             +++     PN++ F +V   C   +  +E G+Q+HG++VK+ + R    G ++  MY 
Sbjct: 238 REMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYA 297

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           +    + A ++F  I   +L+SW +LI+ +   G   +A+  F E  D G+  D   +  
Sbjct: 298 RCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMA 357

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++  C     L  G  +H + +K G   DV +  +L+ +YA+  D  SA  +      + 
Sbjct: 358 LLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRD 417

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N+IL+  ++      EDV  LFS    +    D ++ + +LS SA        + +
Sbjct: 418 VVTWNSILTACVQH--QHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQV 475

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHGL 545
           HAY+ K G   D ++ N LI  YAKCGS+D A ++F+ + + RD+ SW++++  YA  G 
Sbjct: 476 HAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGY 535

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
            K AL LF  M+  G  P+ ++ +GVL AC   GL + G   ++ ++  YG+ P  EH +
Sbjct: 536 AKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCS 595

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           C++DLL RAGRLSEA   ++  PF    ++W+TL++ S+   +      A++ +L+++P 
Sbjct: 596 CVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPS 655

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
            + +++L+ N+YA  G  +E A+++  M    + K  G SWI++  +L  F+   + HPE
Sbjct: 656 HSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPE 715

Query: 726 SEEIYSKLDLLNDEM 740
           S+EIY+ L+++  EM
Sbjct: 716 SDEIYTMLEVIGLEM 730



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 221/488 (45%), Gaps = 14/488 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL LG+ VHA  +K  S +D    N L+ +Y+K   +     LF+ +  +  I+W S+I
Sbjct: 162 GDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSII 221

Query: 132 KGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRI-FGEQIHAFAIKSG 189
            G    G     L I  +M        NE     +  ACS++ + + +GEQIH  ++K  
Sbjct: 222 AGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQ 281

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            + N + G SL  MY        A  VF  +   D+   N +I  ++  G    A  +F 
Sbjct: 282 LDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFS 341

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +  S   P+  T   ++  C     + +G+ +H   VK G+  ++ V N++++MY +  
Sbjct: 342 EMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCL 401

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A  +F    +R++++W ++++  V+  H       F          D   L  V+ 
Sbjct: 402 DFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLS 461

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF-SCKYTA 428
             +     E+  Q+H +A K G + D  L   L+D YAK G L  A  L +   + +   
Sbjct: 462 ASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVF 521

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +++++ G+ +      ++ + LF++ R  G++P+ VTF  +L+ + S+  LV     + 
Sbjct: 522 SWSSLIVGYAQ--FGYAKEALDLFARMRNLGVKPNHVTFVGVLT-ACSRVGLV-DEGCYY 577

Query: 489 YSI---KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           YSI   + G        + ++ + A+ G +  A +    +  + DI+ W  +L+A   H 
Sbjct: 578 YSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHN 637

Query: 545 ---LGKGA 549
              +GK A
Sbjct: 638 DVDMGKRA 645



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 167/355 (47%), Gaps = 2/355 (0%)

Query: 68  SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
           S+    L+ G+ +H   +K     +++   +L ++YA+ N LD A+K+F  +     ++W
Sbjct: 261 SVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSW 320

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
            SLI  +   G     + +  +M  S  + +  T   +L AC   +    G  IH++ +K
Sbjct: 321 NSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVK 380

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G   +V V  SL+SMY     F  A +VF     +DV   N ++    +    E  F +
Sbjct: 381 LGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKL 440

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  L  S    +  +  NV+S   E    E  KQ+H  A K G+V +  + N ++  Y K
Sbjct: 441 FSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAK 500

Query: 308 HGMSEEAERMFDAI-SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
            G  ++A ++F+ + + R++ SW++LI GY + G+  +A++ F    +LG+  +      
Sbjct: 501 CGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVG 560

Query: 367 VIDGCSVCSNLELGLQLHG-FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           V+  CS    ++ G   +     ++G +      + ++D+ A+ G L  A   +D
Sbjct: 561 VLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVD 615



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 4/109 (3%)

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGY-AADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           SRL SL   Q  LV  R L A S +  + A + I+ N LITMY +CG+ D A  +F G+ 
Sbjct: 53  SRLRSLP--QGRLVH-RHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGML 109

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           DR+ VSW A+++A+A +     A+ LF  M R G  PD  ++   + AC
Sbjct: 110 DRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICAC 158


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 207/696 (29%), Positives = 359/696 (51%), Gaps = 10/696 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML--V 121
           ++K     GD + G  VH   +K G    T  AN LI +YAK   LD A ++F+ +    
Sbjct: 170 VLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDA 229

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R   +W S++ G + +G     L +   M  +    N +T   +L+ C+ L     G ++
Sbjct: 230 RDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGREL 289

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA  +K G E N+    +L+ MY   G    A  VF  +A KD    N M+  Y +    
Sbjct: 290 HAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFY 348

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A   F  +L   F+P+     ++ S       +  G++ H  A+K  +  ++ VGN +
Sbjct: 349 AEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTL 408

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K G  E + ++F+++  R+ ISWT +++ + +S    +A+   LE    GI  DS
Sbjct: 409 MDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDS 468

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             + ++++ C    ++ L  Q+H +AI++G L D+ L   L+DIY + G+   +  L   
Sbjct: 469 MMIGSILETCCGLKSISLLKQVHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQR 527

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    + ++++             + LF++ + A ++PD V    +L   A  + L 
Sbjct: 528 VEKKDIVSWTSMINCCTNN--GRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLT 585

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           +G+ +H + I+  +  +  V ++L+ MY+ CGS++ A ++F+    +D+V W AM++A  
Sbjct: 586 KGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATG 645

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
           +HG GK A+ LF+ M + G  PD +S L +L AC +S L E G    + +   Y L+P  
Sbjct: 646 MHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQ 705

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           EH+AC+VD+LGR+G+  EA   I + P      +W  L+   ++  N   +++A+ +LL+
Sbjct: 706 EHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLE 765

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           LEP + G++ILVSN++A  G  + A + RT M +  L K   CSWIEI + +H F +   
Sbjct: 766 LEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDY 825

Query: 722 DHPESEEIYSKLDLLNDEMKLK---VKDSSAFELQD 754
            H +SE I+ KL  + + ++ +   V+D+  F L D
Sbjct: 826 CHRDSEAIHLKLSEITEMLRREGGYVEDTR-FVLHD 860



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 171/612 (27%), Positives = 302/612 (49%), Gaps = 31/612 (5%)

Query: 77  GQAVHAFLLKSGSQN---DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           G+ VHA  + +GS N   D F A  L+ +Y +  R+D A++LF+GM  R+  +W +L+  
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEH---TCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           YL  G     + +   M  S    +     T + +L+AC    D   G ++H  A+K G 
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAY--KDVRCVNFMILEYNKAGESEMAFHVF 248
           + +  V  +LI MY   G    A  VF  L    +DV   N ++    + G +  A  +F
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             + S+ F  N YT   V+ VC E   +  G++LH   +K G    I   NA++ MY K+
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYAKY 314

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  + A R+F  I+E++ ISW +++S YV++    +AI+ F E L  G   D +C+ ++ 
Sbjct: 315 GRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLS 374

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
                 S L  G + H +AIK    +D+++G  L+D+Y K G ++ +  + +    +   
Sbjct: 375 SALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHI 434

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +  IL+ F +     E   M+L  Q+   G+  D +    +L        +   + +H 
Sbjct: 435 SWTTILACFAQSSRHSEALEMILELQKE--GIMVDSMMIGSILETCCGLKSISLLKQVHC 492

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y+I+ G   D+I+ N LI +Y +CG  D +  +F+ +  +DIVSW +M++    +G   G
Sbjct: 493 YAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNG 551

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF---- 604
           A+ LF EM++    PD ++++ +L A   +GLS        + +Q++G   I  +F    
Sbjct: 552 AVFLFTEMQKANIQPDSVALVSILVA--IAGLSS-----LTKGKQVHGFL-IRRNFPIEG 603

Query: 605 ---ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
              + +VD+    G ++ A+ +   +   +  +LW  +++ + +  + K +I   KR+L 
Sbjct: 604 PVVSSLVDMYSGCGSMNYAIRVFERAK-CKDVVLWTAMINATGMHGHGKQAIDLFKRMLQ 662

Query: 662 --LEPKDAGSFI 671
             L P D  SF+
Sbjct: 663 TGLTP-DHVSFL 673



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 162/331 (48%), Gaps = 11/331 (3%)

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG---NAIVTMYGKH 308
           L++   P    +  V+ +        EG+Q+H  AV  G + E   G     +V MYG+ 
Sbjct: 49  LTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRC 108

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF---LDLGICCDSSCLA 365
           G  ++A R+F+ +  R + SW AL+  Y+ SG  G+A+  +         G   D   LA
Sbjct: 109 GRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLA 168

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS-- 423
           +V+  C    +   G ++HG A+K G      +  AL+ +YAK G L SA  + +     
Sbjct: 169 SVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQD 228

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +  A +N+++SG ++     E   + LF   + AG   +  T   +L + A    L  G
Sbjct: 229 ARDVASWNSVVSGCVQNGRTLE--ALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLG 286

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           R LHA  +K G   + I  NAL+ MYAK G +D A ++F  I+++D +SWN+MLS Y  +
Sbjct: 287 RELHAALLKCGSELN-IQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQN 345

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQA 574
                A+  F EM + GF PD   ++ +  A
Sbjct: 346 SFYAEAIDFFGEMLQHGFQPDHACVVSLSSA 376



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA---DVIVGNALITMYAKCGSIDGA 518
           P    +  +L L A++     GR +HA+++ TG      D  +   L+ MY +CG +D A
Sbjct: 55  PAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDA 114

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE---GFAPDDISILGVLQAC 575
            ++F G+  R + SWNA++ AY   G    A+ ++  M+     G APD  ++  VL+AC
Sbjct: 115 RRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKAC 174


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 200/684 (29%), Positives = 357/684 (52%), Gaps = 4/684 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG  V   +++ G ++    AN+LI++++ F+ ++ A  +FD M     I+W ++I 
Sbjct: 312 DQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMIS 371

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y   G     L     M     + N  T S +L  CS +++  +G  IH   +K G ++
Sbjct: 372 AYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDS 431

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NV +  +L+++Y  +G   +AE VF+ +  +D+   N M+  Y + G+      +   LL
Sbjct: 432 NVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELL 491

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                 N  TF + ++ C     + E K +H L +  G    + VGNA+VTMYGK GM  
Sbjct: 492 QMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMM 551

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA+++   + + + ++W ALI G+  +    +A+  +    + GI  +   + +V+  CS
Sbjct: 552 EAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 611

Query: 373 VCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
              +L + G+ +H   +  G+ SD  +  +L+ +YAK GDL S+  + DG   K    +N
Sbjct: 612 APDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWN 671

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+++        +E   + +F + R  G+  D  +FS  L+ +A+ A L  G+ LH   I
Sbjct: 672 AMVAANAHHGCGEE--ALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI 729

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+ +D+ V NA + MY KCG +    ++     +R  +SWN ++SA+A HG  + A  
Sbjct: 730 KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 789

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
            F EM + G  PD ++ + +L AC + GL + G+  ++ + + +G+ P +EH  C++DLL
Sbjct: 790 TFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLL 849

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GR+GRLS A   I   P   + L WR+L++  ++  N + +   ++ LL+L+P D  +++
Sbjct: 850 GRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYV 909

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L SN+ A  G  ++   +R  M    + K+  CSW+++  K+H F    K HP++  I +
Sbjct: 910 LYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISA 969

Query: 732 KL-DLLNDEMKLKVKDSSAFELQD 754
           KL +L+    +      ++F L D
Sbjct: 970 KLGELMKMTKEAGYVPDTSFALHD 993



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 188/622 (30%), Positives = 312/622 (50%), Gaps = 12/622 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH F++K+G   D +    L++ Y     +  AQKLF+ M   + ++WTSL+ GY D
Sbjct: 215 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 274

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G+   VL +   M +     N++T + +  +C LLED++ G Q+    I+ GFE++V V
Sbjct: 275 SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSV 334

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG---ESEMAFHVFVHLLS 253
             SLISM+       EA  VF  +   D+   N MI  Y   G   ES   FH   HL +
Sbjct: 335 ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 394

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              E N  T ++++SVC     ++ G+ +HGL VK G+   + + N ++T+Y + G SE+
Sbjct: 395 ---ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSED 451

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           AE +F A++ER+LISW ++++ YV+ G     +    E L +G   +    A+ +  CS 
Sbjct: 452 AELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSN 511

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L     +H   I  G+   + +G ALV +Y K G +  A+ +L          +NA+
Sbjct: 512 PECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNAL 571

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYSIK 492
           + G  E   ++  + +  +   R  G+  + +T   +L + SA    L  G  +HA+ + 
Sbjct: 572 IGGHAEN--EEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVL 629

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           TG+ +D  V N+LITMYAKCG ++ +  IF G+ ++  ++WNAM++A A HG G+ AL +
Sbjct: 630 TGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKI 689

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F EM+  G   D  S  G L A     + E G  L   + ++ G    L      +D+ G
Sbjct: 690 FGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKL-GFESDLHVTNAAMDMYG 748

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK-DAGSFI 671
           + G + + + ++   P + S L W  L+S        + +      +L L PK D  +F+
Sbjct: 749 KCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 807

Query: 672 LVSNMYAGQGMLDEAAKVRTTM 693
            + +     G++DE      +M
Sbjct: 808 SLLSACNHGGLVDEGLAYYDSM 829



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 265/506 (52%), Gaps = 15/506 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+A+HAF +        F+ N LIN+Y+KF  ++ A+ +FD M  R+  +W++++ GY+ 
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGFENN 193
            G YE  +G+ C M+    + N    + ++ ACS    + D  F  Q+H F +K+G   +
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGF--QVHGFVVKTGILGD 230

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V+VGT+L+  Y   G    A+ +F  +   +V     +++ Y+ +G      +V+  +  
Sbjct: 231 VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 290

Query: 254 SDFEPNDYTFTNVISVCYENLGVEE----GKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
                N  TF  V S C    G+ E    G Q+ G  +++G    +SV N++++M+    
Sbjct: 291 EGVSGNQNTFATVTSSC----GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS 346

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             EEA  +FD ++E ++ISW A+IS Y   G   +++  F     L    +S+ L++++ 
Sbjct: 347 SVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 406

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS   NL+ G  +HG  +K G  S+V +   L+ +Y++ G  + A ++    + +    
Sbjct: 407 VCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 466

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N++++ +++       D + + ++    G   + VTF+  L+  ++  CL+  + +HA 
Sbjct: 467 WNSMMACYVQD--GKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHAL 524

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            I  G+   +IVGNAL+TMY K G +  A ++ + +   D V+WNA++  +A +     A
Sbjct: 525 IIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEA 584

Query: 550 LLLFEEMKREGFAPDDISILGVLQAC 575
           +  ++ ++ +G   + I+++ VL AC
Sbjct: 585 VKAYKLIREKGIPANYITMVSVLGAC 610



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 235/477 (49%), Gaps = 7/477 (1%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L+  S +  ++ G+ +HAF I       +F   +LI+MY   G    A  VF  + +++ 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN-LGVEEGKQLHG 284
              + M+  Y + G  E A  +F  +     EPN +   ++I+ C  +    +EG Q+HG
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             VK G++ ++ VG A+V  YG  G+   A+++F+ + + N++SWT+L+ GY  SG+ G+
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 280

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
            +N +      G+  + +  ATV   C +  +  LG Q+ G  I++G+   V +  +L+ 
Sbjct: 281 VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 340

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +++    ++ A  + D  +      +NA++S +       E   +  F   R    E + 
Sbjct: 341 MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRES--LRCFHWMRHLHNETNS 398

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
            T S LLS+ +S   L  GR +H   +K G  ++V + N L+T+Y++ G  + A  +F+ 
Sbjct: 399 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 458

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG-LSEG 583
           +++RD++SWN+M++ Y   G     L +  E+ + G   + ++    L AC     L E 
Sbjct: 459 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 518

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            I   + +  + G    L     +V + G+ G + EA  ++ + P  +  + W  L+
Sbjct: 519 KI--VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDR-VTWNALI 572


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 167/487 (34%), Positives = 285/487 (58%), Gaps = 8/487 (1%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           + +V++ C     + EG+++H   +K      + +   ++ +Y K     +A R+ D + 
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ERN++SWTA+ISGY + G+  +A++ F+E L  G   +    ATV+  C+  S  +LG Q
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H   IK  + S + +G++L+D+YAK G +  AR + DG   +      AI+SG+ +   
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D+E   + LF + +  GM  + VT++ +L+  +  A L  GR +H++ ++      V++ 
Sbjct: 193 DEE--ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQ 250

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-F 561
           N+LI MY+KCGS+  + +IF  + +R ++SWNAML  Y+ HGLG+ A+ LF+ MK E   
Sbjct: 251 NSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKV 310

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNE-IEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            PD ++ L VL  C + G+ + G+ +F E + Q  G  P +EH+ C+VDL GRAGR+ EA
Sbjct: 311 KPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 370

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
              I   PF  +  +W +L+   ++  N       ++RLL++E ++AG+++++SN+YA  
Sbjct: 371 FEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASA 430

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           G  D+   VR  M +  + KE G SWIE+D  LH F AS + HP  EE+++K+     E+
Sbjct: 431 GRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKV----REL 486

Query: 741 KLKVKDS 747
            +K+K++
Sbjct: 487 SIKIKEA 493



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 188/369 (50%), Gaps = 4/369 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+++HA  IK+ +E  V++ T LI +Y    C  +A  V   +  ++V     MI  Y++
Sbjct: 29  GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 88

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G +  A H+FV +L S   PN++TF  V++ C  + G + G+Q+H L +K      I V
Sbjct: 89  RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 148

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G++++ MY K G   EA R+FD + ER+++S TA+ISGY + G   +A++ F      G+
Sbjct: 149 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 208

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +    A+V+   S  + L+ G Q+H   ++      V L  +L+D+Y+K G L  +R 
Sbjct: 209 RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRR 268

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    +    +NA+L G+  K     E V +    +    ++PD VTF  +LS  +  
Sbjct: 269 IFDSMPERTVISWNAMLVGY-SKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHG 327

Query: 478 ACLVRGRSLHAYSI--KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WN 534
               RG  +    +  K G+  ++     ++ ++ + G ++ AF+  K +      + W 
Sbjct: 328 GMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWG 387

Query: 535 AMLSAYALH 543
           ++L A  +H
Sbjct: 388 SLLGACRVH 396



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 182/361 (50%), Gaps = 3/361 (0%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F  +  ++   I    ++ GQ VHA ++K+  +   +    LI LY K   L  A+++ D
Sbjct: 10  FQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLD 69

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  R+ ++WT++I GY   G     L +  +M  S    NE T + +L +C+       
Sbjct: 70  EMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQL 129

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G QIH+  IK+ FE+++FVG+SL+ MY  +G   EA  VF GL  +DV     +I  Y +
Sbjct: 130 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 189

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  +F  L       N  T+ +V++       ++ G+Q+H   ++  +   + +
Sbjct: 190 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVL 249

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF-LEFLDLG 356
            N+++ MY K G    + R+FD++ ER +ISW A++ GY + G G +A+  F L   +  
Sbjct: 250 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 309

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAI--KHGYLSDVRLGTALVDIYAKGGDLKS 414
           +  DS     V+ GCS     + GL++    +  K G+  ++     +VD++ + G ++ 
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369

Query: 415 A 415
           A
Sbjct: 370 A 370



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 7/175 (4%)

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           + G+E +   +  +L+   SQ  +  G+ +HA+ IKT Y   V +   LI +Y KC  + 
Sbjct: 3   IQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLG 62

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A ++   + +R++VSW AM+S Y+  G    AL LF EM   G AP++ +   VL +C 
Sbjct: 63  DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 122

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHF---ACMVDLLGRAGRLSEAMNLINSSP 628
               S  G  L  +I  +        H    + ++D+  +AG++ EA  + +  P
Sbjct: 123 ----SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173


>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 206/654 (31%), Positives = 339/654 (51%), Gaps = 41/654 (6%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           Q D +  N +++ YA   RL  A++LF+G   RS+ITW+SLI GY   G       +   
Sbjct: 143 QRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKR 202

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M    +K +++T   IL  CS L     GE IH + +K+GFE+NV+V   L+ MY     
Sbjct: 203 MRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRH 262

Query: 210 FREAENVFRGLAYKDVRCVNF--MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
             EAE +F+GLA+     V +  M+  Y + G+   A   F ++ +   E N +TF +++
Sbjct: 263 ISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSIL 322

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
           + C        G+Q+HG  V+ G      V +A+V MY K G    A+R+ + + + +++
Sbjct: 323 TACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVV 382

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           SW ++I G VR G   +AI  F +     +  D     +V++ C +   ++ G  +H   
Sbjct: 383 SWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLN-CCIVGRID-GKSVHCLV 440

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           IK G+ +   +  ALVD+YAK  DL  A  + +    K    + ++++G+ +      E+
Sbjct: 441 IKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQN--GSHEE 498

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
            +  F   R++G+ PD    + +LS  A    L  G+ +H+  IK G  + + V N+L+T
Sbjct: 499 SLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVT 558

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MYAKCG +D A  IF  +  RD+++W A++  YA +G G+ +L  F++MK+         
Sbjct: 559 MYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKK--------- 609

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
                                     IYG+ P  EH+ACM+DL GR G+L EA  ++N  
Sbjct: 610 --------------------------IYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQM 643

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
                  +W+ L++  ++  N +    A+  L +LEP +A  ++++SNMY      D+AA
Sbjct: 644 DVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAA 703

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           K+R  M    ++KE GCSWIE++S+LH F++  + HP   EIYSK+D +   +K
Sbjct: 704 KIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIK 757



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 237/491 (48%), Gaps = 47/491 (9%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA--ITWTS 129
           G ++ G+ +H +++K+G +++ +    L+++YAK   +  A+ LF G+       + WT+
Sbjct: 226 GLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTA 285

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           ++ GY  +GD    +     M+    + N+ T   IL ACS +    FGEQ+H   +++G
Sbjct: 286 MVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNG 345

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F  N +V ++L+ MY   G    A+ V   +   DV   N MI+   + G  E A  +F 
Sbjct: 346 FGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFK 405

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            + + + + + YTF +V++ C   +G  +GK +H L +K G      V NA+V MY K  
Sbjct: 406 KMHARNMKIDHYTFPSVLNCCI--VGRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTE 463

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A  +F+ + E+++ISWT+L++GY ++G   +++  F +    G+  D   +A+++ 
Sbjct: 464 DLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILS 523

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+  + LE G Q+H   IK G  S + +  +LV +YAK G L  A  +      +    
Sbjct: 524 ACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVIT 583

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQ-QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           + A++ G+         D +  F Q +++ G+EP P  +          AC         
Sbjct: 584 WTALIVGYARN--GKGRDSLKYFQQMKKIYGIEPGPEHY----------AC--------- 622

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHG--- 544
                           +I ++ + G +D A +I   +  + D   W A+L+A  +HG   
Sbjct: 623 ----------------MIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLE 666

Query: 545 LG-KGALLLFE 554
           LG + A  LFE
Sbjct: 667 LGERAATNLFE 677


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 321/607 (52%), Gaps = 41/607 (6%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF---REAENV 216
           H    +L  C  L+       IHA  IK+G  N  +  + LI     S  F     A +V
Sbjct: 3   HPSLSLLHNCKTLQSL---RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISV 59

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  +   ++   N M   +  + +   A +++V ++S    PN YTF  ++  C ++   
Sbjct: 60  FETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF 119

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA---------------------- 314
            EG+Q+HG  +K G   ++ V  ++++MY ++G  E+A                      
Sbjct: 120 REGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGY 179

Query: 315 ---------ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
                    ++MFD I  ++++SW A+ISGY  +G+  +A+  F E +   +  D S + 
Sbjct: 180 ASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMV 239

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +V+  C+  +++ELG Q+H +   HG+ S++++  AL+D+Y K G++++A  L +G S K
Sbjct: 240 SVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK 299

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   A    +  GR 
Sbjct: 300 DVISWNTLIGGYTH--MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW 357

Query: 486 LHAYSIK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           +H Y  K   G A       +LI MYAKCG I+ A Q+F  I +R + SWNAM+  +A+H
Sbjct: 358 IHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMH 417

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G    A  +F  M++    PDDI+ +G+L AC +SG+ + G  +F  +++ Y + P LEH
Sbjct: 418 GRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEH 477

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           + CM+DLLG +G   EA  +IN+       ++W +L+   K+ AN +     ++ L+ +E
Sbjct: 478 YGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIE 537

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           PK+ GS++L+SN+YA  G  +E AK+R  +ND  + K  GCS IEIDS +H F+   K H
Sbjct: 538 PKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH 597

Query: 724 PESEEIY 730
           P + EIY
Sbjct: 598 PRNREIY 604



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 215/446 (48%), Gaps = 40/446 (8%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLIN---LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + +HA ++K+G  N  +  + LI    L   F+ L  A  +F+ +   + + W ++ +G+
Sbjct: 19  RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
               D  S L +   M       N +T   +L++C+  +    G+QIH   +K G++ ++
Sbjct: 79  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 138

Query: 195 FVGTSLISMYFHSGCFREAENVF--------------------RG-----------LAYK 223
           +V TSLISMY  +G   +A  VF                    +G           +  K
Sbjct: 139 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 198

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV   N MI  Y + G ++ A  +F  ++ ++  P++ T  +V+S C ++  +E G+Q+H
Sbjct: 199 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 258

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
                 G    + + NA++ +Y K G  E A  +F+ +S +++ISW  LI GY       
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTA 401
           +A+  F E L  G   +   + +++  C+    +E+G  +H +  K   G  +     T+
Sbjct: 319 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 378

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGM 460
           L+D+YAK GD+++A+ + D    +  + +NA++ GF M   A+   D+   FS+ R   +
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDI---FSRMRKNEI 435

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSL 486
           EPD +TF  LLS  +    L  GR +
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 191/429 (44%), Gaps = 45/429 (10%)

Query: 30  NTFSPNPKSQVA-YLCSISSVSCSERTLLFN--DWPQLVKISIGSGDLKLGQAVHAFLLK 86
           +  S +P S +  Y+C IS        LL N   +P L+K    S   + GQ +H  +LK
Sbjct: 78  HALSSDPVSALYLYVCMIS------LGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLK 131

Query: 87  SGSQNDTFEANNLINLYAKFNRLD-------------------------------VAQKL 115
            G   D +   +LI++Y +  RL+                                AQK+
Sbjct: 132 LGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKM 191

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FD + ++  ++W ++I GY + G+ +  L +  +M ++  + +E T   ++ AC+     
Sbjct: 192 FDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASI 251

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G Q+H++    GF +N+ +  +LI +Y   G    A  +F GL+YKDV   N +I  Y
Sbjct: 252 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGY 311

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
                 + A  +F  +L S   PND T  +++  C     +E G+ +H    K   GV  
Sbjct: 312 THMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVAN 371

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             S   +++ MY K G  E A+++FD+I  R+L SW A+I G+   G    A + F    
Sbjct: 372 ASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMR 431

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT--ALVDIYAKGGD 411
              I  D      ++  CS    L+LG  +   ++K  Y    +L     ++D+    G 
Sbjct: 432 KNEIEPDDITFVGLLSACSHSGMLDLGRHIFR-SMKEDYKITPKLEHYGCMIDLLGHSGL 490

Query: 412 LKSARMLLD 420
            K A  +++
Sbjct: 491 FKEAEEMIN 499


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 185/589 (31%), Positives = 325/589 (55%), Gaps = 15/589 (2%)

Query: 165 ILEAC---SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
           IL+ C    L+ D    ++IHA  +K+G   + F+ T L+++Y   G    A  VF  L 
Sbjct: 75  ILQECIDKKLVSD---AQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELP 131

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            ++V     ++  Y    + E+A  VF  +L +   P +YT    +S   +    E GKQ
Sbjct: 132 RRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQ 191

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HG ++K+ +  + S+GN++ ++Y K G  E A + F  I ++N+ISWT +IS +  +G 
Sbjct: 192 IHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGE 251

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
               +  F+E L   +  +   L + +  C V  +L++G Q+H   IK G+ S++ +  +
Sbjct: 252 AATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNS 311

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF--MEKIADDE-------EDVMVLF 452
           ++ +Y K G +  A+ L D         +NA+++G   M   A D+        + + +F
Sbjct: 312 IMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIF 371

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            +   +GM+PD  TFS +LS+ +S   L +G  +HA +IKTG+ +DV+VG AL+ MY KC
Sbjct: 372 LKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKC 431

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           GSI+ A + F  +S R ++SW +M++ YA +G  + ALLLFE+M+  G  P+ I+ +GVL
Sbjct: 432 GSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVL 491

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC ++G+ +  +  F  ++  Y + P+++H+AC++D+  R GRL EA + I       +
Sbjct: 492 SACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPN 551

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
             +W  L++  +     +    A+++LL+L+PKD  ++ L+ NMY   G   E ++VR  
Sbjct: 552 EFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKM 611

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           M + +L +    SWI I  K++ F  + + H +S E+Y  L  L+++ K
Sbjct: 612 MKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKAK 660



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 241/460 (52%), Gaps = 16/460 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            Q +HA ++K+G+  D F    L+N+YAK   ++ A+K+FD +  R+ ++WT+L+ GY+ 
Sbjct: 88  AQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVH 147

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           D   E  + +  +M  +      +T    L A S L  +  G+QIH ++IK   E +  +
Sbjct: 148 DSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASI 207

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G SL S+Y   G    A   FR +  K+V     +I  +   GE+      FV +LS   
Sbjct: 208 GNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECV 267

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           EPN++T T+ +S+C     ++ G Q+H L +K G    + + N+I+ +Y K G   EA++
Sbjct: 268 EPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKK 327

Query: 317 MFDAISERNLISWTALISGYVR---------SGH--GGKAINGFLEFLDLGICCDSSCLA 365
           +FD +   +L++W A+I+G+ R         + H  G +A++ FL+    G+  D    +
Sbjct: 328 LFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFS 387

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +V+  CS    LE G Q+H   IK G+LSDV +GTALV++Y K G ++ A       S +
Sbjct: 388 SVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIR 447

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               + ++++G+ +      +  ++LF   RLAG+ P+ +TF  +LS + S A +V    
Sbjct: 448 TLISWTSMITGYAQN--GQPQQALLLFEDMRLAGVRPNKITFVGVLS-ACSHAGMVDEAL 504

Query: 486 LHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFK 523
            +   +K  Y    ++ +   LI M+ + G +D AF   K
Sbjct: 505 DYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIK 544



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 184/361 (50%), Gaps = 15/361 (4%)

Query: 70  GSGDL---KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
            S DL   +LG+ +H + +K   + D    N+L +LY+K   L+ A K F  +  ++ I+
Sbjct: 179 ASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVIS 238

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           WT++I  + D+G+  + L    +M     + NE T +  L  C +++    G QIH+  I
Sbjct: 239 WTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTI 298

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA---GESEM 243
           K GFE+N+ +  S++ +Y   G   EA+ +F  +    +   N MI  + +     + ++
Sbjct: 299 KLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDL 358

Query: 244 AFH--------VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
           A H        +F+ L  S  +P+ +TF++V+SVC   + +E+G+Q+H   +K G + ++
Sbjct: 359 AAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDV 418

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VG A+V MY K G  E A + F  +S R LISWT++I+GY ++G   +A+  F +    
Sbjct: 419 VVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLA 478

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYAKGGDLKS 414
           G+  +      V+  CS    ++  L           ++ V    A L+D++ + G L  
Sbjct: 479 GVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDE 538

Query: 415 A 415
           A
Sbjct: 539 A 539



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 204/445 (45%), Gaps = 34/445 (7%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  ++  C +   V + +++H   VK G  ++  +   +V +Y K G  E A ++FD + 
Sbjct: 72  YVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELP 131

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
            RN++SWT L++GYV       A+  F E L+ G    +  L T +   S   + ELG Q
Sbjct: 132 RRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQ 191

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +HG++IK+    D  +G +L  +Y+K G L+ A         K    +  ++S +     
Sbjct: 192 IHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAW----G 247

Query: 443 DDEEDV--MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
           D+ E    +  F +     +EP+  T +  LSL      L  G  +H+ +IK G+ +++ 
Sbjct: 248 DNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLP 307

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY-----------ALHGLGKGA 549
           + N+++ +Y KCG I  A ++F  +    +V+WNAM++ +           A H  G  A
Sbjct: 308 IKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEA 367

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L +F ++ R G  PD  +   VL  C      E G  +  +  +   L  ++   A +V+
Sbjct: 368 LSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTA-LVN 426

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA--------NSKFSILASKRLLD 661
           +  + G +  A     S  F E  +  RTL+S + ++              +    RL  
Sbjct: 427 MYNKCGSIERA-----SKAFVEMSI--RTLISWTSMITGYAQNGQPQQALLLFEDMRLAG 479

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEA 686
           + P    +F+ V +  +  GM+DEA
Sbjct: 480 VRPNKI-TFVGVLSACSHAGMVDEA 503



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 19/278 (6%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L +G  +H+  +K G +++    N+++ LY K   +  A+KLFD M   S +TW ++I G
Sbjct: 287 LDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAG 346

Query: 134 YLDDGDY-----------ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           +    D+              L I   + RS  K +  T S +L  CS L     GEQ+H
Sbjct: 347 HARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVH 406

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A  IK+GF ++V VGT+L++MY   G    A   F  ++ + +     MI  Y + G+ +
Sbjct: 407 AQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQ 466

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAI 301
            A  +F  +  +   PN  TF  V+S C     V+E       +  ++ +   +     +
Sbjct: 467 QALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACL 526

Query: 302 VTMYGKHGMSEEAERMFDAISERNL----ISWTALISG 335
           + M+ + G  +EA   FD I E +L      W+ LI+G
Sbjct: 527 IDMFVRLGRLDEA---FDFIKEMDLEPNEFIWSILIAG 561



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 52/262 (19%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VHA  +K+G  +D      L+N+Y K   ++ A K F  M +R+ I+WTS+I G
Sbjct: 399 LEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITG 458

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G  +  L +  DM  +  + N+ T   +L ACS                       
Sbjct: 459 YAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACS----------------------- 495

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLA--YKDVRCVNF---MILEYNKAGESEMAFHVF 248
                       H+G   EA + F+ +   YK    ++    +I  + + G  + AF   
Sbjct: 496 ------------HAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFI 543

Query: 249 VHLLSSDFEPNDYTFTNVISVCYEN----LGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             +   D EPN++ ++ +I+ C       LG    +QL  L  K     +    N ++ M
Sbjct: 544 KEM---DLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPK-----DTETYNLLLNM 595

Query: 305 YGKHGMSEEAERMFDAISERNL 326
           Y   G  +E  R+   + E  L
Sbjct: 596 YLSAGKWKEVSRVRKMMKEEKL 617


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 208/728 (28%), Positives = 373/728 (51%), Gaps = 40/728 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+++S   GD  L +AVHA  LK   + D F  N LI+ Y K   +  A K+F G+   +
Sbjct: 103 LLRLSTRYGDPDLARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPN 160

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +++T+LI G+      +  + +   M  S  + NE+T   IL AC    D   G Q+H 
Sbjct: 161 VVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHG 220

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G  + VF+  +L+ +Y   G       +F  +  +D+   N +I    K  + + 
Sbjct: 221 IVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280

Query: 244 AFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           AF  F  + L    + + ++ + +++ C  ++   +G+QLH LA+K G+   +SV ++++
Sbjct: 281 AFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLI 340

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYV------------------------- 337
             Y K G + +   +F+ +  R++I+WT +I+ Y+                         
Sbjct: 341 GFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA 400

Query: 338 ------RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
                 R+  G +A+  F+E L+ G+      L ++I  C +  + ++  Q+ GF +K G
Sbjct: 401 VLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFG 460

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK--YTAEFNAILSGFMEKIADDEEDVM 449
            LS+  + TALVD+Y + G ++ A  +    S +  YTA   +++ G+        E + 
Sbjct: 461 ILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARN-GKLNEAIS 519

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
           +  S Q    +  D V  + +LSL  S      G  +H +++K+G   +  VGNA ++MY
Sbjct: 520 LFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMY 579

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           +KC ++D A ++F  ++ +DIVSWN +++ + LH  G  AL ++++M++ G  PD I+  
Sbjct: 580 SKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFA 639

Query: 570 GVLQACIYSGLSEGGIC--LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            ++ A  ++ L+    C  LF  +E  + ++P LEH+A  + +LGR G L EA   I + 
Sbjct: 640 LIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNM 699

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           P      +WR L++  ++  N +   LA++ +L +EPKD  S+IL SN+Y+  G    + 
Sbjct: 700 PLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSE 759

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE-MKLKVKD 746
           KVR  M +    K    SWI  ++K+H F A  + HP+ ++IYS L++L  E +K+    
Sbjct: 760 KVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVP 819

Query: 747 SSAFELQD 754
            ++F LQ+
Sbjct: 820 DTSFVLQE 827


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 220/686 (32%), Positives = 358/686 (52%), Gaps = 16/686 (2%)

Query: 68  SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
           S+   D++L + +   + KSG   D F  + L++ +AK   L  A+K+F+ M  R+A+T 
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA---CSLLEDRIF--GEQIH 182
             L+ G +     E    +  DM  S    +  +  ++L +    SL E+     G ++H
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVH 336

Query: 183 AFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
              I +G  +  V +G  L++MY   G   +A  VF  +  KD    N MI   ++ G  
Sbjct: 337 GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A   +  +   D  P  +T  + +S C      + G+Q+HG ++K G+   +SV NA+
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG-GKAINGFLEFLDLGICCD 360
           +T+Y + G   E  ++F ++ E + +SW ++I    RS     +A+  FL     G   +
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLN 516

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               ++V+   S  S  ELG Q+HG A+K+    +     AL+  Y K G++     +  
Sbjct: 517 RITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576

Query: 421 GFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
             + +     +N+++SG++      +   +V F  Q   G   D   ++ +LS  AS A 
Sbjct: 577 RMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ--TGQRLDSFMYATVLSAFASVAT 634

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L RG  +HA S++    +DV+VG+AL+ MY+KCG +D A + F  +  R+  SWN+M+S 
Sbjct: 635 LERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISG 694

Query: 540 YALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           YA HG G+ AL LFE MK +G   PD ++ +GVL AC ++GL E G   F  +   YGL 
Sbjct: 695 YARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLA 754

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL---A 655
           P +EHF+CM D+LGRAG L +  + I   P   + L+WRT++      AN + + L   A
Sbjct: 755 PRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC-CRANGRKAELGKKA 813

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           ++ L  LEP++A +++L+ NMYA  G  ++  K R  M D  + KEAG SW+ +   +H 
Sbjct: 814 AEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHM 873

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMK 741
           FVA  K HP+++ IY KL  LN +M+
Sbjct: 874 FVAGDKSHPDADVIYKKLKELNRKMR 899



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 176/642 (27%), Positives = 301/642 (46%), Gaps = 22/642 (3%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK-FNRLDVAQKLFDGMLVRSAITW 127
           IGS  +  G+ +H  + K     D   +N LI++Y K    +  A   F  + V+++++W
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC-SVILEACSLLE-DRIFGEQIHAFA 185
            S+I  Y   GD  S   I   M     +  E+T  S++  ACSL E D    EQI    
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
            KSG   ++FVG+ L+S +  SG    A  VF  +  ++   +N +++   +    E A 
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294

Query: 246 HVFVHLLSS-DFEPNDYTFTNVISVCY---ENLGVEEGKQLHGLAVKFGVVR-EISVGNA 300
            +F+ + S  D  P  Y         Y   E +G+++G+++HG  +  G+V   + +GN 
Sbjct: 295 KLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V MY K G   +A R+F  +++++ +SW ++I+G  ++G   +A+  +       I   
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  L + +  C+     +LG Q+HG ++K G   +V +  AL+ +YA+ G L   R +  
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                    +N+I+           E V+   + QR AG + + +TFS +LS  +S +  
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR-AGQKLNRITFSSVLSAVSSLSFG 533

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSA 539
             G+ +H  ++K   A +    NALI  Y KCG +DG  +IF  +++ RD V+WN+M+S 
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y  + L   AL L   M + G   D      VL A       E G+    E+     +R 
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM----EVHAC-SVRA 648

Query: 600 ILEH----FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSI 653
            LE      + +VD+  + GRL  A+   N+ P   S   W +++S             +
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS-YSWNSMISGYARHGQGEEALKL 707

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
             + +L    P D  +F+ V +  +  G+L+E  K   +M+D
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 749



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 226/480 (47%), Gaps = 30/480 (6%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H+ L K+    D +  NNLIN Y +      A+K+FD M +R+ ++W  ++ GY  +G++
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR--IFGEQIHAFAIKSGFENNVFVGT 198
           +  L    DM +     N++    +L AC  +     +FG QIH    K  +  +  V  
Sbjct: 84  KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143

Query: 199 SLISMYFHS-GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            LISMY+   G    A   F  +  K+    N +I  Y++AG+   AF +F  +      
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203

Query: 258 PNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           P +YTF ++++         V   +Q+     K G++ ++ VG+ +V+ + K G    A 
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++F+ +  RN ++   L+ G VR   G +A      F+D+    D S  + VI   S   
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATK---LFMDMNSMIDVSPESYVILLSSFPE 320

Query: 376 -------NLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
                   L+ G ++HG  I  G +   V +G  LV++YAK G +  AR +    + K +
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380

Query: 428 AEFNAILSG------FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
             +N++++G      F+E +          +   R   + P   T    LS  AS     
Sbjct: 381 VSWNSMITGLDQNGCFIEAVER--------YKSMRRHDILPGSFTLISSLSSCASLKWAK 432

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ +H  S+K G   +V V NAL+T+YA+ G ++   +IF  + + D VSWN+++ A A
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 471 LSLSASQACL-VRG--RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           + LS  Q+C+  RG  R  H+   K     DV + N LI  Y + G    A ++F  +  
Sbjct: 5   VPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           R+ VSW  ++S Y+ +G  K AL+   +M +EG   +  + + VL+AC
Sbjct: 65  RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRAC 112


>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 192/567 (33%), Positives = 318/567 (56%), Gaps = 10/567 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q H+  +  G   N F+ T LI  Y        +  VF  L +K+V   N +I    K 
Sbjct: 43  RQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCVKN 102

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
                AF +F  + SSD  P+D+T + +  V  E   +  GK +HG +++ G V +  V 
Sbjct: 103 RLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVA 162

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG--KAINGFLEFLDLG 356
           N+I++MY K G  +E+ ++FD ++ RN  SW  LI+GY  SG+    +    F++ + + 
Sbjct: 163 NSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMD 222

Query: 357 -ICCDSSCLATVIDGCS-VCSNLELGLQLHGFAIKH----GYLSDVRLGTALVDIYAKGG 410
            +  D+  +++++  C       + G +LH + +K+    G  SDV LG  L+D+Y++  
Sbjct: 223 EVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSN 282

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
            +   R + D   C+    + A+++G++E   D +E + +    Q + G+EP+ V+   +
Sbjct: 283 KVVVGRRVFDRMKCRNVFSWTAMINGYVEN-GDSDEALSLFRDMQVIDGVEPNRVSLVSV 341

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRD 529
           L   +S + L+ GR +H ++++     +V + NALI MY+KCGS+D A ++F+  S  +D
Sbjct: 342 LPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKD 401

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
            +SW++M+S Y LHG G+ A+LL+++M + G  PD I+ +G+L AC  SGL   G+ +++
Sbjct: 402 AISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYS 461

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            +   YG+ P LE  AC+VD+LGRAG+L  A++ I + P    P +W  LVS S +  + 
Sbjct: 462 SVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDL 521

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +   LA + L+ LEPK+  +++ +SN+YA     D  A+VR  M D RL K  GCSWI I
Sbjct: 522 EMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISI 581

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLL 736
           ++K H F  + K HP S  IY+ LD L
Sbjct: 582 NNKTHCFYVADKAHPSSTSIYNMLDDL 608



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 245/495 (49%), Gaps = 16/495 (3%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           Q +  S+    LKL +  H+ +L  G   ++F A  LI  YA       ++ +FD +  +
Sbjct: 28  QSLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHK 87

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           +   W SLI G + +  Y     +   M  S+   ++ T S + +  S L     G+ IH
Sbjct: 88  NVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIH 147

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE-- 240
             +I++GF ++  V  S++SMY   G F E+  VF  +  ++    N +I  Y  +G   
Sbjct: 148 GKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCN 207

Query: 241 -SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVK----FGVVRE 294
             E  +     +   +  P+ YT ++++ +C  ++G  + G++LH   VK     G+  +
Sbjct: 208 FREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSD 267

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEF 352
           + +G  ++ MY +        R+FD +  RN+ SWTA+I+GYV +G   +A++ F  ++ 
Sbjct: 268 VHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQV 327

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
           +D G+  +   L +V+  CS  S L  G Q+HGFA++    ++V L  AL+D+Y+K G L
Sbjct: 328 ID-GVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSL 386

Query: 413 KSARMLLDGFS-CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
            SAR + +  S CK    +++++SG+   +    ++ ++L+ +   AG+ PD +T   +L
Sbjct: 387 DSARRVFEDDSLCKDAISWSSMISGY--GLHGKGQEAILLYDKMLQAGIRPDMITTVGIL 444

Query: 472 SLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           S       +  G ++++  I   G    + +   ++ M  + G +D A    K I     
Sbjct: 445 SACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPG 504

Query: 531 VS-WNAMLSAYALHG 544
            S W A++S   +HG
Sbjct: 505 PSVWGALVSCSIIHG 519


>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 182/599 (30%), Positives = 321/599 (53%), Gaps = 9/599 (1%)

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
           + E+K        +L+ C+        + IHA  IK+G   ++ V TSL+++Y   G   
Sbjct: 67  KEEKKIEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMG 126

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
            A  +F  L  ++V     ++  Y +  +  +A  VF  +L S   P++YT    ++ C 
Sbjct: 127 NARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACS 186

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
               ++ GKQLH   +K+ +  + S+GNA+ ++Y K G  + +  +F +I E+N+ISWTA
Sbjct: 187 AINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTA 246

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           +IS    +G     +  F E L   I  +   L TV+  C V   L LG  +H  +IK G
Sbjct: 247 VISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLG 306

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED---- 447
           Y  ++R+  +++ +Y K G +  A++L           +NA++SG  + +   ++D    
Sbjct: 307 YQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQ 366

Query: 448 -----VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
                 + +F +    G +PD  T S +L++ +  + L +G  LHA +IK+GY +DV+VG
Sbjct: 367 RSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVG 426

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
            AL+ MY+KCGSI  A + F  +S R ++SW  M++  A HG  + AL LFE+M+  G  
Sbjct: 427 TALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVR 486

Query: 563 PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMN 622
           P+ I+ +GVL AC +SG+ +  +  F  +++ Y ++P+++H+ C++ +  +  RL EA +
Sbjct: 487 PNQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFD 546

Query: 623 LINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGM 682
           +IN   F  S  +W  L++  + +   +    A+++LL L+ KD  +++ + NMY     
Sbjct: 547 IINKMDFEPSEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKR 606

Query: 683 LDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             + ++VR  M + +L K    SWI I  K+H F  +G+ HP + ++Y  L+ L D+ K
Sbjct: 607 WQDVSRVRKLMKEEKLGKFNDWSWITIKEKIHSFKTTGRLHPHNAKMYELLEELLDKAK 665



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 235/463 (50%), Gaps = 24/463 (5%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            Q +HA ++K+G+  D     +L+N+YAK   +  A+K+FD +  R+ + WT+L+ GY+ 
Sbjct: 93  AQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQ 152

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +      + +  DM  S    + +T  + L ACS +     G+Q+HAF IK   + +  +
Sbjct: 153 NSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSI 212

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G +L S+Y   G    + NVF+ +  K+V     +I    + G++ M    F  +L  D 
Sbjct: 213 GNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDI 272

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +PN++T T V+S+C   L +  G+ +H L++K G    + + N+I+ +Y K G  +EA+ 
Sbjct: 273 KPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQI 332

Query: 317 MFDAISERNLISWTALISGYVRS-----------GHGGKAINGFLEFLDLGICCDSSCLA 365
           +F  +   NL++W A+ISG+ ++             G +A++ FLE    G   D   L+
Sbjct: 333 LFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLS 392

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +V+  CS  S L  G QLH   IK GYLSDV +GTALV++Y+K G +  A       S +
Sbjct: 393 SVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTR 452

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +  +++G  +      E  + LF   RLAG+ P+ +TF  +L+     AC   G  
Sbjct: 453 TLISWTTMITGLAQH--GHSEQALQLFEDMRLAGVRPNQITFVGVLA-----ACCHSGMV 505

Query: 486 LHAYS----IKTGYAADVIVGN--ALITMYAKCGSIDGAFQIF 522
             A      ++  Y    ++ +   LI M+ K   +D AF I 
Sbjct: 506 DEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDII 548



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 156/309 (50%), Gaps = 11/309 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           +KLG+ +HAF++K     D    N L +LY+K   LD +  +F  +  ++ I+WT++I  
Sbjct: 191 IKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISA 250

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
             ++G     L    +M   + K NE T + +L  C +    + G  +H+ +IK G++ N
Sbjct: 251 CGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYN 310

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM---------- 243
           + +  S++ +Y   G   EA+ +F  +   ++   N MI  + +A +             
Sbjct: 311 LRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGI 370

Query: 244 -AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  +F+ L  +  +P+ +T ++V++VC     + +G+QLH   +K G + ++ VG A+V
Sbjct: 371 EALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALV 430

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G   +A + F  +S R LISWT +I+G  + GH  +A+  F +    G+  +  
Sbjct: 431 NMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQI 490

Query: 363 CLATVIDGC 371
               V+  C
Sbjct: 491 TFVGVLAAC 499


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 195/638 (30%), Positives = 341/638 (53%), Gaps = 6/638 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G  VHA  +K G  ++ +  + L+N+YAK +++D A+++F+ +  R+ + W +++ G
Sbjct: 325 LNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGG 384

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +  +G  + V+     M R   + +E T + I  AC+ L    FG Q+H   IK+ F +N
Sbjct: 385 FAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSN 444

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FV  +L+ MY  SG  +EA   F  +   D    N +I+ Y +   ++ AF +F  ++S
Sbjct: 445 LFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVS 504

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +   P++ +  +++S C      ++G+Q H L VK G+      G++++ MY K G+   
Sbjct: 505 NGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLA 564

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F ++  RN++S  ALI+GY  S H  +AI+ F E   +G+       A ++DGC  
Sbjct: 565 ARDVFYSMPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDG 623

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRL-GTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFN 431
              L LG Q+HG  +K G+LS   +   +L+ +Y        +  L       K    + 
Sbjct: 624 AFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWT 683

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A++SG+ ++  +  E  +  +   R   + PD  TF+ +L   A  + L  G+ +H+   
Sbjct: 684 ALISGYAQQ--NHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIF 741

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD-IVSWNAMLSAYALHGLGKGAL 550
            TG+  D I  ++LI MYAKCG + G+ Q+F  +  R+ ++SWN+M+   A +G  + AL
Sbjct: 742 HTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEAL 801

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            +F++M+++   PD+++ LGVL AC ++G    G  +F+ +   Y L+P ++H  CMVD+
Sbjct: 802 EIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDI 861

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGR G L+EA   IN       P+LW TL+   +   +      A+ +L++L+P+ + S+
Sbjct: 862 LGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSY 921

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           +L+S +YA       A  +R  M    + K  G SWIE
Sbjct: 922 VLLSGLYAESENWSGADSLRREMKLKGVKKLPGYSWIE 959



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 178/652 (27%), Positives = 290/652 (44%), Gaps = 67/652 (10%)

Query: 9   LLQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKIS 68
           L Q P  S  +  P ++ V I +    P S+   +C +      +   LFN+ P+ V  +
Sbjct: 2   LPQSPSNSIPNCVPNQQLVKILS----PHSEFLQIC-LQHCRRIQAHNLFNEKPKAVLQA 56

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
                L   + +H+  LK G        N +++LY K   +D AQK F  +  +    W 
Sbjct: 57  -----LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWN 111

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           S++  YLD G + +V+     M+    + NE T +++L ACS L+D  +G+Q+H    K 
Sbjct: 112 SVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKM 171

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF    F    LI MY      R+A  VF G    D      +I  Y + G    A  VF
Sbjct: 172 GFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVF 231

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +      P+      VI                               NA V +    
Sbjct: 232 DKMQRVGHVPDQIALVTVI-------------------------------NAYVAL---- 256

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G   +A ++F  I   N+++W  +ISG+ + G   +AI+ FLE    G+    S L +V+
Sbjct: 257 GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVL 316

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
              +  S L  G  +H  AIK G   +V +G+ALV++YAK   + +A+ + +    +   
Sbjct: 317 SAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIV 376

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +NA+L GF +      ++VM  FS  +  G +PD  TF+ + S  AS   L  G  LH 
Sbjct: 377 LWNAMLGGFAQN--GLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHT 434

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             IK  + +++ V NAL+ MYAK G++  A + F+ +   D VSWNA++  Y        
Sbjct: 435 VMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDE 494

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL--RPILEHFAC 606
           A  +F  M   G  PD++S+  ++ AC         +  F + +Q + L  +  L+   C
Sbjct: 495 AFFMFRRMVSNGVLPDEVSLASIVSAC-------ANVKEFKQGQQCHCLLVKVGLDTSTC 547

Query: 607 ----MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
               ++D+  + G +  A ++  S P+       R +VS++ L+A    S L
Sbjct: 548 AGSSLIDMYVKCGVVLAARDVFYSMPY-------RNVVSINALIAGYTMSHL 592



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/571 (25%), Positives = 272/571 (47%), Gaps = 16/571 (2%)

Query: 78  QAVHAF--LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +AV  F  + + G   D      +IN Y    RL  A+KLF  +   + + W  +I G+ 
Sbjct: 226 EAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHA 285

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
             G  E  +    ++ ++  K    +   +L A + L    +G  +HA AIK G ++NV+
Sbjct: 286 KRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVY 345

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           VG++L++MY        A+ VF  L  +++   N M+  + + G ++     F ++    
Sbjct: 346 VGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHG 405

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P+++TFT++ S C     ++ G QLH + +K      + V NA+V MY K G  +EA 
Sbjct: 406 PQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEAR 465

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           + F+ +   + +SW A+I GYV+  +  +A   F   +  G+  D   LA+++  C+   
Sbjct: 466 KQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVK 525

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
             + G Q H   +K G  +    G++L+D+Y K G + +AR +      +     NA+++
Sbjct: 526 EFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIA 585

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+        E+ + LF + ++ G++P  VTF+ LL        L  GR +H   +K G+
Sbjct: 586 GY---TMSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGF 642

Query: 496 -AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGLGKGALLLF 553
            ++  +V  +L+ MY        +  +F  +   + +V W A++S YA     + AL  +
Sbjct: 643 LSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFY 702

Query: 554 EEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQ-IYGLRPILEHFAC--MVD 609
           + M+ +   PD  +   VL+AC   S L  G      E+   I+     ++   C  ++D
Sbjct: 703 QHMRSDNILPDQATFASVLRACAGMSSLQTG-----QEVHSLIFHTGFNMDEITCSSLID 757

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           +  + G +  ++ + +  P   S + W +++
Sbjct: 758 MYAKCGDVKGSLQVFHEMPRRNSVISWNSMI 788



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 169/377 (44%), Gaps = 7/377 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           + K GQ  H  L+K G    T   ++LI++Y K   +  A+ +F  M  R+ ++  +LI 
Sbjct: 526 EFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIA 585

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF-E 191
           GY      E  + +  ++     K  E T + +L+ C        G QIH   +K GF  
Sbjct: 586 GYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLS 644

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFHVFVH 250
           ++  V  SL+ MY +S  F ++E +F  L Y K +     +I  Y +    E A   + H
Sbjct: 645 SSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQH 704

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + S +  P+  TF +V+  C     ++ G+++H L    G   +    ++++ MY K G 
Sbjct: 705 MRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGD 764

Query: 311 SEEAERMFDAISERN-LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            + + ++F  +  RN +ISW ++I G  ++G+  +A+  F +     I  D      V+ 
Sbjct: 765 VKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLS 824

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDV--RLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
            CS    +  G ++    + +  L      LG  +VDI  + G L  A   ++   CK  
Sbjct: 825 ACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLG-CMVDILGRWGFLNEAEEFINKLGCKAD 883

Query: 428 AEFNAILSGFMEKIADD 444
               + L G   K  D+
Sbjct: 884 PMLWSTLLGACRKHGDE 900



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 22/311 (7%)

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK-- 440
           +H  ++K G      LG  +VD+Y K G++  A+        K    +N++LS +++   
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
            A   +  + +++     G+ P+  TF+ +LS  +    +  G+ +H    K G+     
Sbjct: 123 FATVVQSFVCMWNH----GVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSF 178

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
               LI MYAKC ++  A  +F G  + D VSW  +++ Y   G    A+ +F++M+R G
Sbjct: 179 CQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVG 238

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             PD I+++ V+ A +  G       LF +I       P +  +  M+    + G   EA
Sbjct: 239 HVPDQIALVTVINAYVALGRLADARKLFTQIPN-----PNVVAWNVMISGHAKRGFAEEA 293

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI---LVSNMY 677
           ++      F E   L +T +  ++    S  S +AS  +L+         I   L  N+Y
Sbjct: 294 ISF-----FLE---LKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVY 345

Query: 678 AGQGMLDEAAK 688
            G  +++  AK
Sbjct: 346 VGSALVNMYAK 356



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR- 122
           +++   G   L+ GQ VH+ +  +G   D    ++LI++YAK   +  + ++F  M  R 
Sbjct: 720 VLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRN 779

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           S I+W S+I G   +G  E  L I   M +     +E T   +L ACS
Sbjct: 780 SVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACS 827


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 192/580 (33%), Positives = 310/580 (53%), Gaps = 10/580 (1%)

Query: 165 ILEAC----SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           + EAC    SL + R+F EQ+    +K+  E   F+  S++ MY   G   +A  VF  +
Sbjct: 16  LFEACGKIKSLFDGRLFHEQMQR-TVKNPPE---FLENSVLKMYCKCGSLADARKVFDEM 71

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             +++   N +I  Y + G  +  F +F ++L  + +PN  T+   +       G+E GK
Sbjct: 72  RERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGK 131

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           Q+H  A++ G+    SV  AI  MY K G  E AE +F+ +SE+N ++WT ++ GY ++ 
Sbjct: 132 QIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAE 191

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
               A+  F + ++ G+  D    + V+  C+    L  G Q+HG  +K G  S+V +GT
Sbjct: 192 RQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGT 251

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
            LVD Y K  +L+SA    +  S      ++A+++G+ +    + E+ +  F   R   +
Sbjct: 252 PLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQ--MGEFEEALKTFESLRTRSV 309

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           + +  T++ +    ++ A    G   HA +IK+   A     +A+ITMY++CG +D A +
Sbjct: 310 DINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATR 369

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F+ I D D V+W A+++ YA  G    AL LF  M+  G  P+ ++ + VL AC +SGL
Sbjct: 370 VFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGL 429

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
              G      +   YG+   ++H+ CMVD+  RAG L EA+ LI S PFS   + W+ L+
Sbjct: 430 VIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489

Query: 641 SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
                  N +   LA++ L  L+P+D   +IL+ N+YA  G   EAA VR  M +  L K
Sbjct: 490 GGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRK 549

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           E  CSWI +  K+H F+   K HP++EEIYSKL+ LND +
Sbjct: 550 ELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSV 589



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 229/466 (49%), Gaps = 10/466 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+  H  + ++      F  N+++ +Y K   L  A+K+FD M  R+ ++W ++I  Y +
Sbjct: 29  GRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAE 88

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G ++    +  +M   E K N  T    L +         G+QIH+ AI+SG  +N  V
Sbjct: 89  NGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASV 148

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
            T++ +MY   G    AE VF  ++ K+      +++ Y +A     A  +F  +++   
Sbjct: 149 NTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGV 208

Query: 257 EPNDYTFTNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           E ++Y F+ V+  C    G+EE   G+Q+HG  VK G+  E+SVG  +V  Y K    E 
Sbjct: 209 ELDEYVFSIVLKAC---AGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLES 265

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A + F+ ISE N +SW+ALI+GY + G   +A+  F       +  +S    ++   CS 
Sbjct: 266 ATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSA 325

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            ++   G Q H  AIK   ++     +A++ +Y++ G L  A  + +         + AI
Sbjct: 326 LADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAI 385

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIK 492
           ++G+  +   +  + + LF + +  G+ P+ VTF  +L+  +    ++ GR  L + S  
Sbjct: 386 IAGYAYQ--GNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSN 443

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAML 537
            G A  +   + ++ +Y++ G +  A ++ + +    D +SW  +L
Sbjct: 444 YGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 172/347 (49%), Gaps = 1/347 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L++G+ +H+  ++SG  ++      + N+Y K   L+ A+ +F+ M  ++A+ WT ++ G
Sbjct: 127 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVG 186

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y         L +   M     + +E+  S++L+AC+ LE+  FG QIH   +K G E+ 
Sbjct: 187 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESE 246

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V VGT L+  Y        A   F  ++  +    + +I  Y + GE E A   F  L +
Sbjct: 247 VSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRT 306

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              + N +T+T++   C        G Q H  A+K  +V      +A++TMY + G  + 
Sbjct: 307 RSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDY 366

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A R+F++I + + ++WTA+I+GY   G+  +A+  F    D G+  ++     V+  CS 
Sbjct: 367 ATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSH 426

Query: 374 CSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
              +  G Q L   +  +G  + +     +VDIY++ G L+ A  L+
Sbjct: 427 SGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELI 473



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 2/274 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G  +L  G+ +H  ++K G +++      L++ Y K + L+ A K F+ +   +
Sbjct: 218 VLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPN 277

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W++LI GY   G++E  L     +       N  T + I +ACS L D   G Q HA
Sbjct: 278 DVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHA 337

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIKS         +++I+MY   G    A  VF  +   D      +I  Y   G +  
Sbjct: 338 DAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPE 397

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIV 302
           A  +F  +      PN  TF  V++ C  +  V EG+Q L  ++  +GV   I   + +V
Sbjct: 398 ALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMV 457

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
            +Y + G  +EA  +  ++    + +SW  L+ G
Sbjct: 458 DIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           AG+   P ++  L         L  GR  H    +T       + N+++ MY KCGS+  
Sbjct: 4   AGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLAD 63

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A ++F  + +R++VSWN ++SAYA +G+      +F  M      P+  + +G L++ + 
Sbjct: 64  ARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLN 123

Query: 578 -SGLSEG 583
            SGL  G
Sbjct: 124 PSGLEIG 130


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 192/578 (33%), Positives = 313/578 (54%), Gaps = 15/578 (2%)

Query: 177 FGEQIHAFAI--------KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           FG+ IH   +         S  E N+    SLI++Y      R A  +F  ++ + V   
Sbjct: 30  FGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSY 89

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N ++  Y  +GE      +F +++SS ++PN+Y FT V+S C  +  V EG Q HG   K
Sbjct: 90  NVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFK 149

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDA-----ISERNLISWTALISGYVRSGHGG 343
           FG+V    V +++V MY K    + A ++ ++      ++ +   + ++++  V SG  G
Sbjct: 150 FGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLG 209

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
           +A+      +D G+  DS    +V+  C    +L LGLQ+H   +K G   DV +G+ LV
Sbjct: 210 EAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLV 269

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D++ K GD+ SAR + DG   +    + ++++ +++    + E+ + L S     G   +
Sbjct: 270 DMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQN--GEFEETLNLLSCMDREGTMSN 327

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
             TF+ LL+  A  A L  G  LHA   K G    VIVGNALI MY+KCG ID ++ +F 
Sbjct: 328 EFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFF 387

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            + +RDI++WNAM+  Y+ HGLGK ALLLF++M   G  P+ ++ +GVL AC +  L   
Sbjct: 388 DMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNE 447

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
           G    N++ + + + P LEH+ C+V +L RAG L EA N + ++      + WR L++  
Sbjct: 448 GFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNAC 507

Query: 644 KLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAG 703
            +  N       ++ +L ++P+D G++ L+SNMYA     D    +R  M +  + KE G
Sbjct: 508 NIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPG 567

Query: 704 CSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            SWIEI + +H F + G +HPE  +IY+K+ LL + +K
Sbjct: 568 VSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIK 605



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 241/499 (48%), Gaps = 39/499 (7%)

Query: 71  SGDLKLGQAVHAFLL--------KSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           + +L  G+++H  LL         S  + +  + N+LINLY K ++L +A+ LFD M +R
Sbjct: 25  TKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLR 84

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF-GEQI 181
           S +++  L+ GYL  G++  V+ +  +M  S  + NE+  + +L AC+    R+F G Q 
Sbjct: 85  SVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACA-HSGRVFEGMQC 143

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFR----------EAENVFRGLAYKDVRCVNFM 231
           H F  K G   + FV +SL+ MY  S CF           E  N+       D  C N +
Sbjct: 144 HGFLFKFGLVFHHFVKSSLVHMY--SKCFHVDLALQVLESEHGNIDND---NDAFCYNSV 198

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           +    ++G    A  V   ++      +  T+ +V+ +C +   +  G Q+H   +K G+
Sbjct: 199 LNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGL 258

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
             ++ VG+ +V M+GK G    A ++FD +  RN++ WT+L++ Y+++G   + +N  L 
Sbjct: 259 TFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLN-LLS 317

Query: 352 FLDL-GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
            +D  G   +    A +++  +  + L  G  LH    K G  + V +G AL+++Y+K G
Sbjct: 318 CMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCG 377

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
            + S+  +      +    +NA++ G+ +     +   ++LF     AG  P+ VTF  +
Sbjct: 378 CIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQ--ALLLFQDMLSAGECPNHVTFVGV 435

Query: 471 LSLSASQACLVRG-----RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           LS  A  A +  G     + +  + ++ G      V    + +  + G ++ A    +  
Sbjct: 436 LSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCV----VAVLCRAGMLEEAENFMRTT 491

Query: 526 SDR-DIVSWNAMLSAYALH 543
             + D+V+W  +L+A  +H
Sbjct: 492 QVKWDVVAWRVLLNACNIH 510


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 186/668 (27%), Positives = 352/668 (52%), Gaps = 2/668 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK  + +   + K+G   +      L++L+ ++  +D A ++F+ +  +  + + +++KG
Sbjct: 50  LKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKG 109

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +    D +  L     M   E +   +  + +L+ C    +   G++IH   +KSGF  +
Sbjct: 110 FAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +F  T L +MY       EA  VF  +  +D+   N ++  Y++ G + MA  +   +  
Sbjct: 170 LFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCE 229

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            + +P+  T  +V+        +  GK++HG A++ G    +++  A+V MY K G  + 
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKT 289

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +FD + ERN++SW ++I  YV++ +  +A+  F + LD G+      +   +  C+ 
Sbjct: 290 ARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACAD 349

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +LE G  +H  +++     +V +  +L+ +Y K  ++ +A  +      +    +NA+
Sbjct: 350 LGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAM 409

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + GF +     E   +  FSQ +   ++PD  T+  +++  A  +     + +H   ++ 
Sbjct: 410 ILGFAQNGRPIE--ALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRN 467

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
               +V V  AL+ MYAKCG+I  A  IF  +S+R + +WNAM+  Y  HG+GK AL LF
Sbjct: 468 CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELF 527

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           EEM++    P+ ++ L V+ AC +SGL E G+  F+ +++ Y + P ++H+  MVDLLGR
Sbjct: 528 EEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGR 587

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AGRL+EA + I   P   +  ++  ++   ++  N  F+   ++RL +L P+D G  +L+
Sbjct: 588 AGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLL 647

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           +N+Y    M ++  +VR +M    L K  GCS +EI +++H F +    HP S++IY+ L
Sbjct: 648 ANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFL 707

Query: 734 DLLNDEMK 741
           + L  ++K
Sbjct: 708 EKLICQIK 715



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 217/422 (51%), Gaps = 17/422 (4%)

Query: 159 EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR 218
           EH  +++LE CS L++      I     K+G        T L+S++   G   EA  VF 
Sbjct: 37  EHPAALLLERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFE 93

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            +  K       M+  + K  + + A   FV +   + EP  Y FT ++ VC +   +  
Sbjct: 94  PIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRV 153

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           GK++HGL VK G   ++     +  MY K     EA ++FD + ER+L+SW  +++GY +
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQ 213

Query: 339 SGHGGKAINGFLEFLDLGICCDSS------CLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           +G    A    LE ++L   C+ +       + +V+   S    + +G ++HG+A++ G+
Sbjct: 214 NGMARMA----LEMVNL--MCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGF 267

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
            S V + TALVD+YAK G LK+AR+L DG   +    +N+++  +++   ++ ++ MV+F
Sbjct: 268 DSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQN--ENPKEAMVIF 325

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            +    G++P  V+    L   A    L RGR +H  S++     +V V N+LI+MY KC
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKC 385

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
             +D A  +F  +  R IVSWNAM+  +A +G    AL  F +M+     PD  + + V+
Sbjct: 386 KEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVI 445

Query: 573 QA 574
            A
Sbjct: 446 TA 447



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 247/487 (50%), Gaps = 6/487 (1%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           ++  L+K+     +L++G+ +H  L+KSG   D F    L N+YAK  ++  A+K+FD M
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRM 196

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             R  ++W +++ GY  +G     L +   M     K +  T   +L A S L     G+
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGK 256

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IH +A+++GF++ V + T+L+ MY   G  + A  +F G+  ++V   N MI  Y +  
Sbjct: 257 EIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNE 316

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             + A  +F  +L    +P D +    +  C +   +E G+ +H L+V+  + R +SV N
Sbjct: 317 NPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVN 376

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           ++++MY K    + A  MF  +  R ++SW A+I G+ ++G   +A+N F +     +  
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKP 436

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D+    +VI   +  S       +HG  +++    +V + TALVD+YAK G +  AR++ 
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D  S ++   +NA++ G+        +  + LF + +   + P+ VTF  ++S + S + 
Sbjct: 497 DMMSERHVTTWNAMIDGY--GTHGIGKAALELFEEMQKGTIRPNGVTFLSVIS-ACSHSG 553

Query: 480 LVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAM 536
           LV       + +K  Y+ +  + +  A++ +  + G ++ A+     +  +  V+ + AM
Sbjct: 554 LVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613

Query: 537 LSAYALH 543
           L A  +H
Sbjct: 614 LGACQIH 620



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 14/299 (4%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           CS+L+    +     K+G   +    T LV ++ + G +  A  + +    K    +  +
Sbjct: 47  CSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTM 106

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           L GF +    D +  +  F + R   +EP    F+ LL +   +A L  G+ +H   +K+
Sbjct: 107 LKGFAK--VSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G++ D+     L  MYAKC  +  A ++F  + +RD+VSWN +++ Y+ +G+ + AL + 
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF----ACMVD 609
             M  E   P  I+I+ VL A     L   G     EI   Y +R   +        +VD
Sbjct: 225 NLMCEENLKPSFITIVSVLPAVSALRLIRIG----KEIHG-YAMRAGFDSLVNIATALVD 279

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD--LEPKD 666
           +  + G L  A  L+       + + W +++       N K +++  +++LD  ++P D
Sbjct: 280 MYAKCGSLKTA-RLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTD 337


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 199/613 (32%), Positives = 316/613 (51%), Gaps = 41/613 (6%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS--GCFREAEN 215
           ++H    +L  C  L+     +QIH+  IK+G  N  F  + LI     S  G    A +
Sbjct: 27  HDHPSLTLLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALS 83

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F+ +   +    N MI   + +    +A   +VH++SS  EPN+YTF ++   C +  G
Sbjct: 84  LFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRG 143

Query: 276 VEEGKQLHGLAVKFGV-------------------------------VREISVGNAIVTM 304
             EGKQ+H   +K G+                               +R+     A++T 
Sbjct: 144 AHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITG 203

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y   G  +EA  +FD I  R+++SW A+ISGY +SG   +A+  F E     +  + S +
Sbjct: 204 YASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTM 263

Query: 365 ATVIDGCSVC-SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            +V+  C+   S+L+LG  +  +    G  S++RL   L+D+Y K GDL+ A  L +   
Sbjct: 264 LSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ 323

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K    +N ++ G+       E   + LF +   + ++P+ VTF  +L   A+   L  G
Sbjct: 324 DKNVVSWNVMIGGYTHMSCYKE--ALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLG 381

Query: 484 RSLHAYSIKT--GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           + +HAY  K        V +  +LI MYAKCG +  A +IF  ++ + + +WNAM+S +A
Sbjct: 382 KWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFA 441

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
           +HG    AL LF  M  EGF PDDI+ +GVL AC ++GL   G   F+ + Q Y + P L
Sbjct: 442 MHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKL 501

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
            H+ CM+DL GRAG   EA  L+ +        +W +L+   ++    + +   +K L +
Sbjct: 502 PHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFE 561

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           LEP++  +++L+SN+YAG G  ++ AK+RT +ND R+ K  GCS IE+DS +H F+   K
Sbjct: 562 LEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDK 621

Query: 722 DHPESEEIYSKLD 734
            HP+S EIY  LD
Sbjct: 622 VHPQSNEIYKMLD 634



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 238/544 (43%), Gaps = 41/544 (7%)

Query: 38  SQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEAN 97
           S V+ L  +S    S    L +D P L  +S     L+  + +H+ ++K+G  N  F  +
Sbjct: 6   SPVSTLQVLSFSDPSPPYKLVHDHPSLTLLS-NCKTLQTLKQIHSQIIKTGLHNTHFALS 64

Query: 98  NLINLYA--KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
            LI   A      L  A  LF  +   + + W  +I+G          L     M  S  
Sbjct: 65  KLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGT 124

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS-------- 207
           + NE+T   I ++C+ +     G+Q+HA  +K G E+N FV TSLI+MY  +        
Sbjct: 125 EPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARL 184

Query: 208 -----------------------GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
                                  G   EA  +F  +  +DV   N MI  Y ++G  E A
Sbjct: 185 VFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEA 244

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYEN-LGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              F  +  +   PN  T  +V+S C ++   ++ G  +       G+   I + N ++ 
Sbjct: 245 MAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLID 304

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  EEA  +F+ I ++N++SW  +I GY       +A+  F   +   I  +   
Sbjct: 305 MYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVT 364

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             +++  C+    L+LG  +H +  K+     + V L T+L+D+YAK GDL  A+ + D 
Sbjct: 365 FLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDC 424

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            + K  A +NA++SGF   +    +  + LFS+    G  PD +TF  +L+       L 
Sbjct: 425 MNTKSLATWNAMISGF--AMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLS 482

Query: 482 RGRSLHAYSIKTGYAADVIVG-NALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSA 539
            GR   +  I+    +  +     +I ++ + G  D A  + K +  + D   W ++L A
Sbjct: 483 LGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGA 542

Query: 540 YALH 543
             +H
Sbjct: 543 CRIH 546


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 192/628 (30%), Positives = 342/628 (54%), Gaps = 11/628 (1%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKF--NEHTCSVILEACSLLEDRIF 177
           R+ ++W S+I+ + D+G  E    +  +M     +  F  +  T   +L  C+   +   
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+ +H +A+K   +  + +  +L+ MY   GC   A+ +F+    K+V   N M+  ++ 
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 238 AGESEMAFHVFVHLLS--SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            G++   F V   +L+   D + ++ T  N + VC+    +   K+LH  ++K   V   
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V NA V  Y K G    A+R+F  I  + + SW ALI G+ +S     +++  L+    
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  DS  + +++  CS   +L LG ++HGF I++    D+ +  +++ +Y   G+L + 
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           + L D    K    +N +++G+++    D    + +F Q  L G++   ++   +    +
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDR--ALGVFRQMVLYGIQLCGISMMPVFGACS 358

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
               L  GR  HAY++K     D  +  +LI MYAK GSI  + ++F G+ ++   SWNA
Sbjct: 359 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 418

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M+  Y +HGL K A+ LFEEM+R G  PDD++ LGVL AC +SGL   G+   ++++  +
Sbjct: 419 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF 478

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSIL 654
           GL+P L+H+AC++D+LGRAG+L +A+ ++      E+ + +W++L+S  ++  N +    
Sbjct: 479 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 538

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
            + +L +LEP+   +++L+SN+YAG G  ++  KVR  MN++ L K+AGCSWIE++ K+ 
Sbjct: 539 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVF 598

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMKL 742
            FV   +     EEI S   +L  EMK+
Sbjct: 599 SFVVGERFLDGFEEIKSLWSIL--EMKI 624



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/516 (22%), Positives = 247/516 (47%), Gaps = 12/516 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           ++ LG+ VH + +K     +    N L+++Y+K   +  AQ +F     ++ ++W +++ 
Sbjct: 57  EIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVG 116

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG--EQIHAFAIKSGF 190
           G+  +GD      +   M    E       +++        +      +++H +++K  F
Sbjct: 117 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 176

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             N  V  + ++ Y   G    A+ VF G+  K V   N +I  + ++ +  ++    + 
Sbjct: 177 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 236

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  S   P+ +T  +++S C +   +  GK++HG  ++  + R++ V  +++++Y   G 
Sbjct: 237 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 296

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
               + +FDA+ +++L+SW  +I+GY+++G   +A+  F + +  GI      +  V   
Sbjct: 297 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 356

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           CS+  +L LG + H +A+KH    D  +  +L+D+YAK G +  +  + +G   K TA +
Sbjct: 357 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 416

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAY 489
           NA++ G+   I    ++ + LF + +  G  PD +TF  +L+       +  G R L   
Sbjct: 417 NAMIMGY--GIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 474

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIF--KGISDRDIVSWNAMLSAYALH-GLG 546
               G   ++     +I M  + G +D A ++   +   + D+  W ++LS+  +H  L 
Sbjct: 475 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 534

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
            G  +  +  + E   P++     VL + +Y+GL +
Sbjct: 535 MGEKVAAKLFELEPEKPENY----VLLSNLYAGLGK 566


>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25970
 gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 701

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 199/667 (29%), Positives = 355/667 (53%), Gaps = 7/667 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
            H + +K GS +D + +N +++ Y KF  L  A  LFD M  R +++W ++I GY   G 
Sbjct: 22  THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E    +   M RS    + ++ S +L+  + ++    GEQ+H   IK G+E NV+VG+S
Sbjct: 82  LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF-VHLLSSDFEP 258
           L+ MY       +A   F+ ++  +    N +I  + +  + + AF +  +  + +    
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +  TF  ++++  + +     KQ+H   +K G+  EI++ NA+++ Y   G   +A+R+F
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261

Query: 319 DAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           D +   ++LISW ++I+G+ +      A   F++     +  D      ++  CS   + 
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAK--GGDLKSARMLLDGFSCKYTAEFNAILS 435
             G  LHG  IK G         AL+ +Y +   G ++ A  L +    K    +N+I++
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           GF +K     ED +  FS  R + ++ D   FS LL   +  A L  G+ +HA + K+G+
Sbjct: 382 GFAQK--GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGF 439

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFE 554
            ++  V ++LI MY+KCG I+ A + F+ IS +   V+WNAM+  YA HGLG+ +L LF 
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFS 499

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           +M  +    D ++   +L AC ++GL + G+ L N +E +Y ++P +EH+A  VDLLGRA
Sbjct: 500 QMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRA 559

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G +++A  LI S P +  P++ +T + V +     + +   +  LL++EP+D  +++ +S
Sbjct: 560 GLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLS 619

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           +MY+     +E A V+  M +  + K  G SWIEI +++  F A  + +P  ++IY  + 
Sbjct: 620 HMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIK 679

Query: 735 LLNDEMK 741
            L  EM+
Sbjct: 680 DLTQEMQ 686



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 225/428 (52%), Gaps = 31/428 (7%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           LG+ VH  ++K G + + +  ++L+++YAK  R++ A + F  +   ++++W +LI G++
Sbjct: 119 LGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFV 178

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEA------CSLLEDRIFG---EQIHAFAI 186
              D ++   +   M        E   +V ++A       +LL+D +F    +Q+HA  +
Sbjct: 179 QVRDIKTAFWLLGLM--------EMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVL 230

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGL-AYKDVRCVNFMILEYNKAGESEMAF 245
           K G ++ + +  ++IS Y   G   +A+ VF GL   KD+   N MI  ++K    E AF
Sbjct: 231 KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAF 290

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +F+ +     E + YT+T ++S C        GK LHG+ +K G+ +  S  NA+++MY
Sbjct: 291 ELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY 350

Query: 306 GKH--GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            +   G  E+A  +F+++  ++LISW ++I+G+ + G    A+  F       I  D   
Sbjct: 351 IQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYA 410

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            + ++  CS  + L+LG Q+H  A K G++S+  + ++L+ +Y+K G ++SAR      S
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470

Query: 424 CKY-TAEFNAILSGFME----KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            K+ T  +NA++ G+ +    +++ D      LFSQ     ++ D VTF+ +L+  +   
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLD------LFSQMCNQNVKLDHVTFTAILTACSHTG 524

Query: 479 CLVRGRSL 486
            +  G  L
Sbjct: 525 LIQEGLEL 532



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 15/215 (6%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR-SAITWTSLIK 132
           L+LGQ +HA   KSG  ++ F  ++LI +Y+K   ++ A+K F  +  + S + W ++I 
Sbjct: 424 LQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMIL 483

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFAIK 187
           GY   G  +  L +   M     K +  T + IL ACS   L+++   +       + I+
Sbjct: 484 GYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQ 543

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA-GESEMAFH 246
              E+      + + +   +G   +A+ +   +       V    L   +A GE EMA  
Sbjct: 544 PRMEHY----AAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQ 599

Query: 247 VFVHLLSSDFEPNDYTFTNV-ISVCYENLGVEEGK 280
           V  HLL  + EP D+ FT V +S  Y +L   E K
Sbjct: 600 VANHLL--EIEPEDH-FTYVSLSHMYSDLKKWEEK 631


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 195/631 (30%), Positives = 317/631 (50%), Gaps = 68/631 (10%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q HA  +K+G  N+  + T L+S Y ++ CF +A  V   +   +V   + +I  ++K 
Sbjct: 33  RQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKF 92

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            +   A   F  +L+    P++    + +  C     ++  +Q+HG+A   G   +  V 
Sbjct: 93  HQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG------------------ 340
           +++V MY K     +A R+FD + E +++SW+AL++ Y R G                  
Sbjct: 153 SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212

Query: 341 --------------HGGKAINGFLEFLDL---GICCDSSCLATVIDGCSVCSNLELGLQL 383
                         H G      L FLD+   G   D + +++V+       +L +G+ +
Sbjct: 213 PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF------ 437
           HG+ IK G +SD  + +AL+D+Y K         + D          NA + G       
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332

Query: 438 ------MEKIADDEEDVMV---------------------LFSQQRLAGMEPDPVTFSRL 470
                   ++ D   ++ V                     LF + ++AG++P+ VT   L
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCL 392

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           L    + A L+ G++ H +S++ G + DV VG+ALI MYAKCG I  +   F GI  +++
Sbjct: 393 LPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNL 452

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           V WNA+++ YA+HG  K A+ +F+ M+R G  PD IS   VL AC  SGL+E G   FN 
Sbjct: 453 VCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNS 512

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           +   YG+   +EH+ACMV LL RAG+L +A  +I   P +    +W  L+S  ++  N  
Sbjct: 513 MSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVS 572

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
              +A+++L +LEP + G++IL+SN+YA +GM +E  +VR  M +  L K  GCSWIE+ 
Sbjct: 573 LGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVK 632

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +K+H  +A  K HP+  +I  KLD L+ EMK
Sbjct: 633 NKVHMLLAGDKSHPQMTQIIEKLDKLSMEMK 663



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 128/546 (23%), Positives = 243/546 (44%), Gaps = 76/546 (13%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +  L   +  HA +LK+G  NDT  A  L++ YA       A  + D +   +  ++++L
Sbjct: 26  TASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTL 85

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  +     +   L     M       +       ++AC+ L       Q+H  A  SGF
Sbjct: 86  IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGL-------------AYKDVRCV--------- 228
           +++ FV +SL+ MY      R+A  VF  +             AY    CV         
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205

Query: 229 -------------NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
                        N MI  +N +G    A  +F+ +    FEP+  T ++V+    +   
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS------------- 322
           +  G  +HG  +K G+V +  V +A++ MYGK   + E  ++FD +              
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325

Query: 323 ----------------------ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
                                 E N++SWT++I+   ++G   +A+  F E    G+  +
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPN 385

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  +  ++  C   + L  G   H F+++ G  +DV +G+AL+D+YAK G ++++R+  D
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
           G   K    +NA+++G+   +    ++ M +F   + +G +PD ++F+ +LS + SQ+ L
Sbjct: 446 GIPTKNLVCWNAVIAGY--AMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLS-ACSQSGL 502

Query: 481 VRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAML 537
               S +  S+ + Y  +  V +   ++T+ ++ G ++ A+ + + +  + D   W A+L
Sbjct: 503 TEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALL 562

Query: 538 SAYALH 543
           S+  +H
Sbjct: 563 SSCRVH 568



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 182/443 (41%), Gaps = 76/443 (17%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P  VK   G   LK  + VH     SG  +D+F  ++L+++Y K N++  A ++FD M  
Sbjct: 118 PSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFE 177

Query: 122 RSAITWTSL-----------------------------------IKGYLDDGDYESVLGI 146
              ++W++L                                   I G+   G Y   + +
Sbjct: 178 PDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLM 237

Query: 147 ACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH 206
             DM+    + +  T S +L A   LED + G  IH + IK G  ++  V ++LI MY  
Sbjct: 238 FLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGK 297

Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV 266
             C  E   VF  + + DV   N  I   ++ G+ E +  +F  L     E N  ++T++
Sbjct: 298 CSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSM 357

Query: 267 ISVCYEN---------------LGVE--------------------EGKQLHGLAVKFGV 291
           I+ C +N                GV+                     GK  H  +++ G+
Sbjct: 358 IACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI 417

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
             ++ VG+A++ MY K G  + +   FD I  +NL+ W A+I+GY   G   +A+  F  
Sbjct: 418 STDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDL 477

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELG-LQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
               G   D      V+  CS     E G    +  + K+G  + V     +V + ++ G
Sbjct: 478 MQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG 537

Query: 411 DLKSA-----RMLLDGFSCKYTA 428
            L+ A     RM ++  +C + A
Sbjct: 538 KLEQAYAMIRRMPVNPDACVWGA 560



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 34/375 (9%)

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           + + +Q H   +K G+  +  +   +++ Y  +    +A  + D + E N+ S++ LI  
Sbjct: 29  LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYA 88

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           + +      A++ F + L  G+  D+  L + +  C+  S L+   Q+HG A   G+ SD
Sbjct: 89  FSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSD 148

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE---------- 445
             + ++LV +Y K   ++ A  + D         ++A+++ +  +   DE          
Sbjct: 149 SFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD 208

Query: 446 -----------------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                                   + +++F    L G EPD  T S +L        LV 
Sbjct: 209 SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVM 268

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G  +H Y IK G  +D  V +ALI MY KC       Q+F  +   D+ S NA +   + 
Sbjct: 269 GILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSR 328

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           +G  + +L LF ++K +G   + +S   ++  C  +G     + LF E+ QI G++P   
Sbjct: 329 NGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM-QIAGVKPNSV 387

Query: 603 HFACMVDLLGRAGRL 617
              C++   G    L
Sbjct: 388 TIPCLLPACGNIAAL 402



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 3/228 (1%)

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S  ++L    Q H   +K G  +D  L T L+  YA       A ++LD         F+
Sbjct: 24  STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            ++  F +         +  FSQ    G+ PD       +   A  + L   R +H  + 
Sbjct: 84  TLIYAFSK--FHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS 141

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
            +G+ +D  V ++L+ MY KC  I  A ++F  + + D+VSW+A+++AYA  G    A  
Sbjct: 142 VSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKR 201

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           LF EM   G  P+ IS  G++    +SGL    + +F ++  + G  P
Sbjct: 202 LFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM-HLRGFEP 248



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 42/246 (17%)

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
            S Q LA +  D V  +    L+++ A L + R  HA+ +KTG   D  +   L++ YA 
Sbjct: 3   LSAQALALL--DSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN 60

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
                 A  +   + + ++ S++ ++ A++       AL  F +M   G  PD+  +   
Sbjct: 61  NMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSA 120

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
           ++AC        G+       Q++G+  +                          S F  
Sbjct: 121 VKAC-------AGLSALKPARQVHGIASV--------------------------SGFDS 147

Query: 632 SPLLWRTLVSVSKLMANSKFSILASKRLLD--LEPKDAGSFILVSNMYAGQGMLDEAAKV 689
              +  +LV     M      I  + R+ D   EP D  S+  +   YA QG +DEA ++
Sbjct: 148 DSFVQSSLVH----MYIKCNQIRDAHRVFDRMFEP-DVVSWSALVAAYARQGCVDEAKRL 202

Query: 690 RTTMND 695
            + M D
Sbjct: 203 FSEMGD 208


>gi|297742233|emb|CBI34382.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 212/674 (31%), Positives = 343/674 (50%), Gaps = 36/674 (5%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+LG  +H  +LKSG   + F AN+L+++YAK  R++ A KLFD M  ++ ++WTS++ 
Sbjct: 57  DLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDHMPDKTVVSWTSMMS 116

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G+   G ++ V+ I   M  + +  NE+T +VIL+AC+   D    + IH   IK+GF  
Sbjct: 117 GHCQRGAFDEVISIFWRMLETLQP-NEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVM 175

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           + F+  SLI  Y  SG    AE + + L  +DV     +I      G  E A   F  + 
Sbjct: 176 DAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLFFFEMQ 235

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                PN  T  +++  C      +  + +HGL +K      + V N++V MY  +G  +
Sbjct: 236 EDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVFVMNSLVEMYSINGYFK 295

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           E  ++F                 +   G G        ++L       +  +AT++ GCS
Sbjct: 296 EGFQIF---------------CNFCFEGDG--------QYL------STETIATLLQGCS 326

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               L+LG Q+HG+ IKHG+     +  +L+ +YA+     +A  L    SC+    +N 
Sbjct: 327 HSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNT 386

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGME---PDPVTFSRLLSLSASQACLVRGRSLHAY 489
           ++S  + K +   + +M+L       G +   PD VT    +   +S A L  G+ +H Y
Sbjct: 387 MISSLV-KGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGY 445

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
             + G   D+ V N+L+ MY KCG +  A ++ + +  RD+ SWN++++AY ++G G  A
Sbjct: 446 ITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISA 505

Query: 550 LLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           L +F+++K  G   P+ I+   +L AC ++GL   G  +F  +++ Y L P +EHFACMV
Sbjct: 506 LNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACMV 565

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGRAGRL EA   I   PF   P +W  L+    L  N   +   +K+L  LEPK   
Sbjct: 566 DLLGRAGRLEEAEAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKLYILEPKSRA 625

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTM-NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
             + +SN+YA     ++AAKVR  M     L KE G S +E+  +   F+     HPE+ 
Sbjct: 626 WRVALSNVYASVNKWEDAAKVRAEMRRSEELQKEGGWSSVEVRGQEFRFMVGDTMHPEAR 685

Query: 728 EIYSKLDLLNDEMK 741
            +Y+ L  +N+ ++
Sbjct: 686 MVYAVLKGINEHIR 699



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 245/542 (45%), Gaps = 44/542 (8%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   +L +C+   D   G  IH   +KSG   NVFV  SL+ MY   G   +A  +F  +
Sbjct: 44  TAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDHM 103

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             K V     M+  + + G  +    +F  +L +  +PN+YT   ++  C +   ++  +
Sbjct: 104 PDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQACAQKRDLKLVQ 162

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +H   +K G V +  + N+++  Y K G    AE++   +  R+++SWT++ISG V +G
Sbjct: 163 LIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNG 222

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              KA+  F E  + G+  ++  + +++  CS+ +  ++   +HG  +K  +  +V +  
Sbjct: 223 MVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVFVMN 282

Query: 401 ALVDIYAKGGDLKSARMLLDGFS--CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           +LV++Y+  G  K      +GF   C +  E +                           
Sbjct: 283 SLVEMYSINGYFK------EGFQIFCNFCFEGD--------------------------- 309

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G      T + LL   +   CL  G  +H Y IK G+    IV N+LI MYA+    D A
Sbjct: 310 GQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAA 369

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG----FAPDDISILGVLQA 574
           FQ+F+ +S RDIVSWN M+S+         AL+L  E+   G      PD ++IL  +QA
Sbjct: 370 FQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQA 429

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C      + G  +   I +   +  I    + +VD+ G+ GRL  A  +    P  +   
Sbjct: 430 CSSLASLQLGQVIHGYITRAGLICDIFVQNS-LVDMYGKCGRLHLAEKVSEEMPVRDLG- 487

Query: 635 LWRTLVSVSKLMAN--SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
            W +L++   +  N  S  ++    +       +A +F  + +  A  G++ E  ++  +
Sbjct: 488 SWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKS 547

Query: 693 MN 694
           M 
Sbjct: 548 MK 549



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 123/216 (56%), Gaps = 3/216 (1%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           DS     V+  C+   +L LG  +H   +K G  ++V +  +L+D+YAK G ++ A  L 
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    K    + +++SG  ++ A DE  V+ +F +  L  ++P+  T + +L   A +  
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDE--VISIFWRM-LETLQPNEYTLAVILQACAQKRD 157

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L   + +H + IKTG+  D  + N+LI  Y K G++  A ++ K +  RD+VSW +++S 
Sbjct: 158 LKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISG 217

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             L+G+ + ALL F EM+ +G +P+ ++IL +LQAC
Sbjct: 218 CVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQAC 253



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 140/279 (50%), Gaps = 18/279 (6%)

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +H LS     +  T   V+S C  N  +  G  +H   +K G+   + V N+++ MY K 
Sbjct: 36  IHTLS-----DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKC 90

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  E+A ++FD + ++ ++SWT+++SG+ + G   + I+ F   L+  +  +   LA ++
Sbjct: 91  GRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVIL 149

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+   +L+L   +H   IK G++ D  L  +L+D Y K G L +A  L+    C+   
Sbjct: 150 QACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVV 209

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG----- 483
            + +++SG +  +    E  ++ F + +  G+ P+ VT      LS  QAC +       
Sbjct: 210 SWTSVISGCV--LNGMVEKALLFFFEMQEDGVSPNTVTI-----LSILQACSLINEWQVF 262

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           + +H   +K  +  +V V N+L+ MY+  G     FQIF
Sbjct: 263 QWVHGLVMKAEWRENVFVMNSLVEMYSINGYFKEGFQIF 301


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 205/686 (29%), Positives = 358/686 (52%), Gaps = 16/686 (2%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           L + +HA L+ SG     F +  L+NLYA    + +++  FD +  +   TW S+I  Y+
Sbjct: 91  LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150

Query: 136 DDGDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            +G +     I C  Y+    ++ + + +T   +L+AC  L D   G +IH +  K GF+
Sbjct: 151 RNGHFRE--AIDC-FYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQ 204

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VFV  SLI MY   G    A ++F  + ++D+   N MI    + G +  A  V   +
Sbjct: 205 WDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEM 264

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                  +  T  +++ VC +   +     +H   +K G+  E+ V NA++ MY K G  
Sbjct: 265 RLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNL 324

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +A+++F  +  R+++SW ++I+ Y ++     A   F +    G+  D   L ++    
Sbjct: 325 GDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIA 384

Query: 372 SVCSNLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           +   + +    +HGF ++ G+L + V +G A++D+YAK G + SA  + +    K    +
Sbjct: 385 AQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSW 444

Query: 431 NAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           N ++SG+ +  +A +  +V  +  + R   ++ +  T+  +L+  A    L +G  +H +
Sbjct: 445 NTLISGYTQNGLASEAIEVYRMMEECR--EIKLNQGTWVSILAAYAHVGALQQGMRIHGH 502

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            IKT    DV VG  LI +Y KCG +  A  +F  +     V WNA++S + +HG G+ A
Sbjct: 503 LIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKA 562

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LF EM+ EG  PD ++ + +L AC +SGL + G   F+ +++ YG++P L+H+ CMVD
Sbjct: 563 LKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVD 621

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGRAG L  A + I   P      +W  L+   ++  N +    AS RL +++ ++ G 
Sbjct: 622 LLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGY 681

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++L+SN+YA  G  +   KVR+   +  L K  G S IE++ ++  F    + HP+ +EI
Sbjct: 682 YVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEI 741

Query: 730 YSKLDLLNDEMK-LKVKDSSAFELQD 754
           Y++L +L  +MK L      +F LQD
Sbjct: 742 YAELRILTAKMKSLGYIPDYSFVLQD 767



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 167/347 (48%), Gaps = 4/347 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GD+     +H +++K G + + F +N LIN+YAKF  L  AQK+F  M +R  ++W S+I
Sbjct: 287 GDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSII 346

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF- 190
             Y  + D  +  G    M  +  + +  T   +    +   D      +H F ++ G+ 
Sbjct: 347 AAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWL 406

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
              V +G +++ MY   G    A  VF  +  KDV   N +I  Y + G +  A  V+  
Sbjct: 407 MEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRM 466

Query: 251 LLS-SDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +    + + N  T+ ++++  Y ++G +++G ++HG  +K  +  ++ VG  ++ +YGK 
Sbjct: 467 MEECREIKLNQGTWVSILA-AYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKC 525

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G   +A  +F  +   + + W A+IS +   GHG KA+  F E  D G+  D     +++
Sbjct: 526 GRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLL 585

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
             CS    ++ G        ++G    ++    +VD+  + G L+ A
Sbjct: 586 SACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMA 632



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 12/271 (4%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           C+   L  +LH   +  G +    +   LV++YA  GD+  +R   D    K    +N++
Sbjct: 86  CTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSM 145

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC--LVRGRSLHAYSI 491
           +S ++       E +   +    +   + D  TF  +L     +AC  LV GR +H +  
Sbjct: 146 ISAYVRN-GHFREAIDCFYQLLLVTKFQADFYTFPPVL-----KACQTLVDGRKIHCWVF 199

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+  DV V  +LI MY++ G +  A  +F  +  RD+ SWNAM+S    +G    AL 
Sbjct: 200 KLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 259

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSG-LSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
           + +EM+ EG   D +++  +L  C   G +S   +     I+  +GL   L     ++++
Sbjct: 260 VLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIK--HGLEFELFVSNALINM 317

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             + G L +A  +     F    + W ++++
Sbjct: 318 YAKFGNLGDAQKVFQQM-FLRDVVSWNSIIA 347



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 8/182 (4%)

Query: 19  SLPPLKKKVPINT----FSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDL 74
           +L P+K  V  NT    ++ N  +  A         C E  L    W  ++      G L
Sbjct: 434 NLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGAL 493

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + G  +H  L+K+    D F    LI+LY K  RL  A  LF  +   S++ W ++I  +
Sbjct: 494 QQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCH 553

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS----LLEDRIFGEQIHAFAIKSGF 190
              G  E  L +  +M     K +  T   +L ACS    + E + F   +  + IK   
Sbjct: 554 GIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSL 613

Query: 191 EN 192
           ++
Sbjct: 614 KH 615


>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera]
 gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 192/568 (33%), Positives = 310/568 (54%), Gaps = 9/568 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +QIH   I +      F    L+  +     F  A  +F  + Y +    N MI      
Sbjct: 48  QQIHTQMIINAIHKPNF----LLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTT 103

Query: 239 GES-EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            +   +    +  +      PN++T+  V   C   L +  G+  H   +K G+  +  V
Sbjct: 104 WQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHV 163

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            ++++TMY + G    A R+FD ISE++L+SW ++ISGY R G+ G A+  F E  D G 
Sbjct: 164 RHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGF 223

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   L +++  C    +L LG  + GF +++    +  +G+AL+ +Y K GDL SAR 
Sbjct: 224 EPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARR 283

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +NA+++G+ +    DE   ++LFS  R +G+ PD +T   +LS  AS 
Sbjct: 284 VFDRMVKKDVVTWNAMITGYAQNGVSDE--AIILFSGMRESGVNPDKITLVGVLSACASI 341

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  G+ L  Y+ + G   D+ V  ALI MYAKCGS+D A ++F+ +  ++ VSWNAM+
Sbjct: 342 GALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMI 401

Query: 538 SAYALHGLGKGALLLFEEMKREGFA--PDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           SA A HG  + +L LF+ M +EG A  P+DIS +GVL AC+++GL + G  LF+ +   +
Sbjct: 402 SALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSF 461

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           GL P +EH +CMVDLL RAG + EA + I   P     ++   L+   +   N   S   
Sbjct: 462 GLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERV 521

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
              LL++EP ++G++I+ S ++A     D++A++R  M    ++K  GCSWIEI++++H 
Sbjct: 522 MHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHE 581

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKLK 743
           F A    H  S+++   ++LLN+EMK++
Sbjct: 582 FHAGDVLHFISQDMCQVINLLNEEMKVE 609



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 166/345 (48%), Gaps = 3/345 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  GQ  H+ +LKSG   D    ++LI +Y++   L  A+++FD +  +  ++W S+I G
Sbjct: 142 LNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISG 201

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G     +G+  +M  +  + +E T   IL AC  L D   G  I  F +++  + N
Sbjct: 202 YSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLN 261

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            FVG++LI MY   G    A  VF  +  KDV   N MI  Y + G S+ A  +F  +  
Sbjct: 262 SFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRE 321

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           S   P+  T   V+S C     ++ GK L   A + G+  +I V  A++ MY K G  ++
Sbjct: 322 SGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDD 381

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG--ICCDSSCLATVIDGC 371
           A R+F+ + ++N +SW A+IS     G   ++++ F      G  +  +      V+  C
Sbjct: 382 ALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSAC 441

Query: 372 SVCSNLELGLQLHGF-AIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
                ++ G QL    +   G +  +   + +VD+ A+ G +  A
Sbjct: 442 VHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEA 486



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 6/386 (1%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           N  T   +  AC+ L     G+  H+  +KSG   +  V  SLI+MY   G    A  VF
Sbjct: 125 NNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVF 184

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             ++ KD+   N MI  Y++ G +  A  +F  +  + FEP++ T  +++  C +   + 
Sbjct: 185 DEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLG 244

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
            G  + G  V+  +     VG+A++ MYGK G    A R+FD + ++++++W A+I+GY 
Sbjct: 245 LGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYA 304

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           ++G   +AI  F    + G+  D   L  V+  C+    L+ G  L  +A + G  +D+ 
Sbjct: 305 QNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIY 364

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           + TAL+D+YAK G L  A  + +    K    +NA++S          ++ + LF +   
Sbjct: 365 VSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISAL--AFHGRPQESLSLFKRMSK 422

Query: 458 AG--MEPDPVTFSRLLSLSASQACLVRGRSL-HAYSIKTGYAADVIVGNALITMYAKCGS 514
            G  + P+ ++F  +LS       +  GR L    S   G    +   + ++ + A+ G 
Sbjct: 423 EGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGH 482

Query: 515 IDGAFQIFKGISDR-DIVSWNAMLSA 539
           +  A+   + + ++ D V   A+L A
Sbjct: 483 VHEAWDFIEKMPEKPDEVVLGALLGA 508



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 3/256 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL LG  +  F++++    ++F  + LI +Y K   L  A+++FD M+ +  +TW ++I
Sbjct: 241 GDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMI 300

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G  +  + +   M  S    ++ T   +L AC+ +    FG+ +  +A + G +
Sbjct: 301 TGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQ 360

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           N+++V T+LI MY   G   +A  VF  +  K+    N MI      G  + +  +F  +
Sbjct: 361 NDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRM 420

Query: 252 LSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGL-AVKFGVVREISVGNAIVTMYGKH 308
                   PND +F  V+S C     V+EG+QL  L +  FG+V +I   + +V +  + 
Sbjct: 421 SKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARA 480

Query: 309 GMSEEAERMFDAISER 324
           G   EA    + + E+
Sbjct: 481 GHVHEAWDFIEKMPEK 496


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Glycine max]
          Length = 1033

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 218/690 (31%), Positives = 373/690 (54%), Gaps = 20/690 (2%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           V  S+    L L + + A + KS    D +  + L++ +A++  +D A+ +F+ M  R+A
Sbjct: 257 VACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNA 316

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA----CSLLEDRIFGEQ 180
           +T   L+ G       E    I  +M +   + N  + +V+L A     +L E +  G++
Sbjct: 317 VTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQE 375

Query: 181 IHAFAIKSGFENN-VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI--LEYNK 237
           +HA+ I++   +  + +G +L+++Y        A ++F+ +  KD    N +I  L++N+
Sbjct: 376 VHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNE 435

Query: 238 AGESEMA-FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             E  +A FH    +  +   P+ ++  + +S C     +  G+Q+HG  +K G+  ++S
Sbjct: 436 RFEEAVACFHT---MRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS 492

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG-KAINGFLEFLDL 355
           V NA++T+Y +    EE +++F  + E + +SW + I     S     +AI  FLE +  
Sbjct: 493 VSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQA 552

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   +      ++   S  S LELG Q+H   +KH    D  +   L+  Y K   ++  
Sbjct: 553 GWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDC 612

Query: 416 RMLLDGFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            ++    S +     +NA++SG++      +   +V    Q+  G   D  T + +LS  
Sbjct: 613 EIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQK--GQRLDDFTLATVLSAC 670

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           AS A L RG  +HA +I+    A+V+VG+AL+ MYAKCG ID A + F+ +  R+I SWN
Sbjct: 671 ASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWN 730

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           +M+S YA HG G  AL LF +MK+ G  PD ++ +GVL AC + GL + G   F  + ++
Sbjct: 731 SMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEV 790

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           Y L P +EHF+CMVDLLGRAG + +    I + P + + L+WRT++      ANS+ + L
Sbjct: 791 YELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGAC-CRANSRNTEL 849

Query: 655 ---ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
              A+K L++LEP +A +++L+SNM+A  G  ++  + R  M +  + KEAGCSW+ +  
Sbjct: 850 GRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKD 909

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            +H FVA  + HPE E+IY KL  + ++M+
Sbjct: 910 GVHVFVAGDQTHPEKEKIYDKLKEIMNKMR 939



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 256/515 (49%), Gaps = 28/515 (5%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
              +H  + K+G  +D F  N L+N++ +   L  AQKLFD M  ++ ++W+ L+ GY  
Sbjct: 58  AHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQ 117

Query: 137 DGDYESVLGIACDMYRSEEKF----NEHTCSVILEACSLLEDRI--FGEQIHAFAIKSGF 190
           +G  +     AC ++R         N +     L AC  L   +   G +IH    KS +
Sbjct: 118 NGMPDE----ACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPY 173

Query: 191 ENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            +++ +   L+SMY H S    +A  VF  +  K     N +I  Y + G++  AF +F 
Sbjct: 174 ASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFS 233

Query: 250 HLLSSDFE----PNDYTFTNVISVCYE--NLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
            +     E    PN+YTF ++++V     + G+   +Q+     K   V+++ VG+A+V+
Sbjct: 234 SMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVS 293

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            + ++G+ + A+ +F+ + +RN ++   L+ G  R   G +A   F E  DL +  ++S 
Sbjct: 294 GFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASS 352

Query: 364 LATVIDGCSVCSNLE----LGLQLHGFAIKHGYLSDVR--LGTALVDIYAKGGDLKSARM 417
            A ++   +  SNL+     G ++H + I++  L DV   +G ALV++YAK   + +AR 
Sbjct: 353 YAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNA-LVDVWILIGNALVNLYAKCNAIDNARS 411

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +      K T  +N+I+SG      +  E+ +  F   R  GM P   +    LS  AS 
Sbjct: 412 IFQLMPSKDTVSWNSIISGLDHN--ERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASL 469

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             ++ G+ +H   IK G   DV V NAL+T+YA+   ++   ++F  + + D VSWN+ +
Sbjct: 470 GWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFI 529

Query: 538 SAYALHGLGK-GALLLFEEMKREGFAPDDISILGV 571
            A A        A+  F EM + G+ P+ ++ + +
Sbjct: 530 GALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 158/599 (26%), Positives = 289/599 (48%), Gaps = 43/599 (7%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN-RLDVAQKLFDGMLVRSAITW 127
           +G   LKLG  +H  + KS   +D   +N L+++Y+  +  +D A+++F+ + ++++ +W
Sbjct: 153 LGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASW 212

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKF----NEHT-CSVILEACSLLE-DRIFGEQI 181
            S+I  Y   GD  S   +   M R   +     NE+T CS++  ACSL++      EQ+
Sbjct: 213 NSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQM 272

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
            A   KS F  +++VG++L+S +   G    A+ +F  +  ++   +N +++   +  + 
Sbjct: 273 LARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQG 332

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYE--NL--GVEEGKQLHGLAVKFGVVR-EIS 296
           E A  +F   +    E N  ++  ++S   E  NL  G  +G+++H   ++  +V   I 
Sbjct: 333 EEAAKIFKE-MKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWIL 391

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           +GNA+V +Y K    + A  +F  +  ++ +SW ++ISG   +    +A+  F      G
Sbjct: 392 IGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNG 451

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +      + + +  C+    + LG Q+HG  IK G   DV +  AL+ +YA+   ++  +
Sbjct: 452 MVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQ 511

Query: 417 MLLDGFSCKYTAEFNAI-LSGFMEKIADDEEDVMV---LFSQQRLAGMEPDPVTFSRLLS 472
            +          E++ +  + F+  +A  E  V+     F +   AG +P+ VTF  +LS
Sbjct: 512 KVF-----FLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILS 566

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIV 531
             +S + L  GR +HA  +K   A D  + N L+  Y KC  ++    IF  +S+ RD V
Sbjct: 567 AVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEV 626

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI------ 585
           SWNAM+S Y  +G+   A+ L   M ++G   DD ++  VL AC      E G+      
Sbjct: 627 SWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACA 686

Query: 586 ---CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
              CL  E E + G        + +VD+  + G++  A       P   +   W +++S
Sbjct: 687 IRACL--EAEVVVG--------SALVDMYAKCGKIDYASRFFELMPV-RNIYSWNSMIS 734



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 218/451 (48%), Gaps = 37/451 (8%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             Q+H    K+G  ++VF   +L++++  +G    A+ +F  +  K++   + ++  Y +
Sbjct: 58  AHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQ 117

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG---VEEGKQLHGLAVKFGVVRE 294
            G  + A  +F  ++S+   PN Y   + +  C E LG   ++ G ++HGL  K     +
Sbjct: 118 NGMPDEACMLFRGIISAGLLPNHYAIGSALRACQE-LGPNMLKLGMEIHGLISKSPYASD 176

Query: 295 ISVGNAIVTMYGKHGMS-EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
           + + N +++MY     S ++A R+F+ I  +   SW ++IS Y R    G AI+ F  F 
Sbjct: 177 MVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRR---GDAISAFKLFS 233

Query: 354 DLGI-CCDSSCLATVIDGCSV----CSNLELGL----QLHGFAIKHGYLSDVRLGTALVD 404
            +     + +C       CS+    CS ++ GL    Q+     K  ++ D+ +G+ALV 
Sbjct: 234 SMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVS 293

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
            +A+ G + SA+M+ +    +     N ++ G   +    EE   +    + L  +E + 
Sbjct: 294 GFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQ-HQGEEAAKIFKEMKDL--VEINA 350

Query: 465 VTFSRLLS----LSASQACLVRGRSLHAYSIKTGYA-ADVIVGNALITMYAKCGSIDGAF 519
            +++ LLS     S  +    +G+ +HAY I+       +++GNAL+ +YAKC +ID A 
Sbjct: 351 SSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNAR 410

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
            IF+ +  +D VSWN+++S    +   + A+  F  M+R G  P   S++  L +C   G
Sbjct: 411 SIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLG 470

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
               G       +QI+G     E   C +DL
Sbjct: 471 WIMLG-------QQIHG-----EGIKCGLDL 489



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 149/291 (51%), Gaps = 11/291 (3%)

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           VE+  QLH    K G+  ++   N +V ++ + G    A+++FD + ++NL+SW+ L+SG
Sbjct: 55  VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC--SNLELGLQLHGFAIKHGYL 393
           Y ++G   +A   F   +  G+  +   + + +  C     + L+LG+++HG   K  Y 
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYA 174

Query: 394 SDVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
           SD+ L   L+ +Y+     +  AR + +    K +A +N+I+S +  +   D      LF
Sbjct: 175 SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRR--GDAISAFKLF 232

Query: 453 SQQRLAGME----PDPVTFSRLLSLSAS--QACLVRGRSLHAYSIKTGYAADVIVGNALI 506
           S  +    E    P+  TF  L++++ S     L     + A   K+ +  D+ VG+AL+
Sbjct: 233 SSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALV 292

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           + +A+ G ID A  IF+ + DR+ V+ N ++   A    G+ A  +F+EMK
Sbjct: 293 SGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMK 343



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 478 ACLVR-GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
           +C V     LH    KTG  +DV   N L+ ++ + G++  A ++F  +  +++VSW+ +
Sbjct: 52  SCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCL 111

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +S YA +G+   A +LF  +   G  P+  +I   L+AC
Sbjct: 112 VSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRAC 150


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 197/673 (29%), Positives = 362/673 (53%), Gaps = 15/673 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+  + +H  +  + S N  F  N ++  Y K   +  A+  FD +  ++  +W S++ 
Sbjct: 39  DLESVRQIHDRISGAASAN-VFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLT 97

Query: 133 GYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGEQIHA-FAIKSGF 190
            Y  +G Y + L    D+Y R + + N    + +L AC+ ++    G+ IH+  +   G 
Sbjct: 98  AYAQNGHYRAAL----DLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGL 153

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + +V +  SL++MY   G   +A+ +F  ++ + V   N MI  Y ++G  E A  ++  
Sbjct: 154 KLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYED 213

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           +   D EP+  TFT+V+S C  NLG+ ++G+++H L    G   ++S+ NA++TMY +  
Sbjct: 214 M---DVEPSVRTFTSVLSAC-SNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCK 269

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             ++A ++F  +  R+++SW+A+I+ +  +    +AI  + +    G+  +    A+V+ 
Sbjct: 270 CLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLL 329

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+   +L  G  +H   + +GY   +  GTALVD+Y   G L  AR L D    +    
Sbjct: 330 ACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGL 389

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP-DPVTFSRLLSLSASQACLVRGRSLHA 488
           +  ++ G+ ++       V+ L+ + +     P   + +S ++S  AS       R  H+
Sbjct: 390 WTVLIGGYSKQ--GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHS 447

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
                G  +D ++  +L+ MY++ G+++ A Q+F  +S RD ++W  +++ YA HG    
Sbjct: 448 DIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGL 507

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL L++EM+ EG  P +++ + VL AC ++GL E G  LF  I+  Y + P + H++C++
Sbjct: 508 ALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCII 567

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLL RAGRLS+A  LIN+ P   + + W +L+  S++  + K +  A+ ++  L+P D  
Sbjct: 568 DLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPA 627

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           S++L+SN++A  G L   A VR TM    + K  G SWIE+  ++H F      HP  +E
Sbjct: 628 SYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQE 687

Query: 729 IYSKLDLLNDEMK 741
           I+++L  L+ ++K
Sbjct: 688 IFAELQRLSPKIK 700



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 164/354 (46%), Gaps = 4/354 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L  G+ +HA +   G++ D    N L+ +YA+   LD A K+F  +  R  ++W+++I
Sbjct: 234 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMI 293

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             + +   ++  +     M     + N +T + +L AC+ + D   G  +H   + +G++
Sbjct: 294 AAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYK 353

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             +  GT+L+ +Y   G   EA ++F  +  +D      +I  Y+K G       ++  +
Sbjct: 354 ITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREM 413

Query: 252 LSSDFEP-NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
            ++   P     ++ VIS C       + +Q H      G++ +  +  ++V MY + G 
Sbjct: 414 KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGN 473

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A ++FD +S R+ ++WT LI+GY + G  G A+  + E    G          V+  
Sbjct: 474 LESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYA 533

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLLDGF 422
           CS     E G QL   +I+  Y     +   + ++D+ ++ G L  A  L++  
Sbjct: 534 CSHAGLQEQGKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAM 586


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 200/684 (29%), Positives = 357/684 (52%), Gaps = 4/684 (0%)

Query: 73   DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
            D  LG  V   +++ G ++    AN+LI++++ F+ ++ A  +FD M     I+W ++I 
Sbjct: 962  DQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMIS 1021

Query: 133  GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
             Y   G     L     M     + N  T S +L  CS +++  +G  IH   +K G ++
Sbjct: 1022 AYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDS 1081

Query: 193  NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            NV +  +L+++Y  +G   +AE VF+ +  +D+   N M+  Y + G+      +   LL
Sbjct: 1082 NVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELL 1141

Query: 253  SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                  N  TF + ++ C     + E K +H L +  G    + VGNA+VTMYGK GM  
Sbjct: 1142 QMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMM 1201

Query: 313  EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            EA+++   + + + ++W ALI G+  +    +A+  +    + GI  +   + +V+  CS
Sbjct: 1202 EAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 1261

Query: 373  VCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
               +L + G+ +H   +  G+ SD  +  +L+ +YAK GDL S+  + DG   K    +N
Sbjct: 1262 APDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWN 1321

Query: 432  AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            A+++        +E   + +F + R  G+  D  +FS  L+ +A+ A L  G+ LH   I
Sbjct: 1322 AMVAANAHHGCGEE--ALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI 1379

Query: 492  KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
            K G+ +D+ V NA + MY KCG +    ++     +R  +SWN ++SA+A HG  + A  
Sbjct: 1380 KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 1439

Query: 552  LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
             F EM + G  PD ++ + +L AC + GL + G+  ++ + + +G+ P +EH  C++DLL
Sbjct: 1440 TFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLL 1499

Query: 612  GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            GR+GRLS A   I   P   + L WR+L++  ++  N + +   ++ LL+L+P D  +++
Sbjct: 1500 GRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYV 1559

Query: 672  LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
            L SN+ A  G  ++   +R  M    + K+  CSW+++  K+H F    K HP++  I +
Sbjct: 1560 LYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISA 1619

Query: 732  KL-DLLNDEMKLKVKDSSAFELQD 754
            KL +L+    +      ++F L D
Sbjct: 1620 KLGELMKMTKEAGYVPDTSFALHD 1643



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/548 (29%), Positives = 284/548 (51%), Gaps = 1/548 (0%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           IL+ C   + +  G  IH   I +GF +++ + T LI  Y   G    A NVF G+  + 
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     M+  Y++ G  E AF +F  +     + N +T+ + +  C     ++ G Q+ G
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
              K   V  + V +A+V  + K G  E+A  +F  + ER+++SW A+I GY   G    
Sbjct: 156 CIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 215

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           +   F   L  G+  D   L +V+   +    L +  Q+HG   + GY S   +   L++
Sbjct: 216 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 275

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
            YAK G L+SA+ L  G   K      A+++G+  +      D + LF +     +  D 
Sbjct: 276 AYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHE-GIYSVDALDLFKEMNQMNIGMDD 334

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           V    +L++ A+ A    G  +HA+++K   + DV +GNALI MYAK G I+ A + F  
Sbjct: 335 VILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDE 394

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           + +++++SW +++S YA HG G  A+ L+++M+ +GF P+D++ L +L AC ++GL+  G
Sbjct: 395 MEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEG 454

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
              FN +   Y ++P  EH++CMVDL  R G L EA NL+       +  LW  ++  S 
Sbjct: 455 CECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASS 514

Query: 645 LMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
           +         A+  L +++P+++ ++++++++Y+  G+ D+A K+R  M +    K AG 
Sbjct: 515 IYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGY 574

Query: 705 SWIEIDSK 712
           S+ +   K
Sbjct: 575 SFFQATKK 582



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 188/622 (30%), Positives = 312/622 (50%), Gaps = 12/622 (1%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            G  VH F++K+G   D +    L++ Y     +  AQKLF+ M   + ++WTSL+ GY D
Sbjct: 865  GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 924

Query: 137  DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
             G+   VL +   M +     N++T + +  +C LLED++ G Q+    I+ GFE++V V
Sbjct: 925  SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSV 984

Query: 197  GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG---ESEMAFHVFVHLLS 253
              SLISM+       EA  VF  +   D+   N MI  Y   G   ES   FH   HL +
Sbjct: 985  ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 1044

Query: 254  SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               E N  T ++++SVC     ++ G+ +HGL VK G+   + + N ++T+Y + G SE+
Sbjct: 1045 ---ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSED 1101

Query: 314  AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
            AE +F A++ER+LISW ++++ YV+ G     +    E L +G   +    A+ +  CS 
Sbjct: 1102 AELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSN 1161

Query: 374  CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
               L     +H   I  G+   + +G ALV +Y K G +  A+ +L          +NA+
Sbjct: 1162 PECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNAL 1221

Query: 434  LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYSIK 492
            + G  E   ++  + +  +   R  G+  + +T   +L + SA    L  G  +HA+ + 
Sbjct: 1222 IGGHAEN--EEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVL 1279

Query: 493  TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            TG+ +D  V N+LITMYAKCG ++ +  IF G+ ++  ++WNAM++A A HG G+ AL +
Sbjct: 1280 TGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKI 1339

Query: 553  FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
            F EM+  G   D  S  G L A     + E G  L   + ++ G    L      +D+ G
Sbjct: 1340 FGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKL-GFESDLHVTNAAMDMYG 1398

Query: 613  RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK-DAGSFI 671
            + G + + + ++   P + S L W  L+S        + +      +L L PK D  +F+
Sbjct: 1399 KCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 1457

Query: 672  LVSNMYAGQGMLDEAAKVRTTM 693
             + +     G++DE      +M
Sbjct: 1458 SLLSACNHGGLVDEGLAYYDSM 1479



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 265/506 (52%), Gaps = 15/506 (2%)

Query: 77   GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            G+A+HAF +        F+ N LIN+Y+KF  ++ A+ +FD M  R+  +W++++ GY+ 
Sbjct: 763  GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822

Query: 137  DGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGFENN 193
             G YE  +G+ C M+    + N    + ++ ACS    + D  F  Q+H F +K+G   +
Sbjct: 823  VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGF--QVHGFVVKTGILGD 880

Query: 194  VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            V+VGT+L+  Y   G    A+ +F  +   +V     +++ Y+ +G      +V+  +  
Sbjct: 881  VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 940

Query: 254  SDFEPNDYTFTNVISVCYENLGVEE----GKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
                 N  TF  V S C    G+ E    G Q+ G  +++G    +SV N++++M+    
Sbjct: 941  EGVSGNQNTFATVTSSC----GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS 996

Query: 310  MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              EEA  +FD ++E ++ISW A+IS Y   G   +++  F     L    +S+ L++++ 
Sbjct: 997  SVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 1056

Query: 370  GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             CS   NL+ G  +HG  +K G  S+V +   L+ +Y++ G  + A ++    + +    
Sbjct: 1057 VCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 1116

Query: 430  FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
            +N++++ +++       D + + ++    G   + VTF+  L+  ++  CL+  + +HA 
Sbjct: 1117 WNSMMACYVQD--GKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHAL 1174

Query: 490  SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
             I  G+   +IVGNAL+TMY K G +  A ++ + +   D V+WNA++  +A +     A
Sbjct: 1175 IIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEA 1234

Query: 550  LLLFEEMKREGFAPDDISILGVLQAC 575
            +  ++ ++ +G   + I+++ VL AC
Sbjct: 1235 VKAYKLIREKGIPANYITMVSVLGAC 1260



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 251/526 (47%), Gaps = 22/526 (4%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           +++++ I     K G  +H  L+ +G  +D      LI  Y K   +  A+ +FDGM  R
Sbjct: 35  KILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPER 94

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           S ++WT+++ GY  +G +E    +  DM     K N+ T    L AC+ L     G Q+ 
Sbjct: 95  SVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQ 154

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
               K  F  N+FV ++L+  +   G   +A  +F  +  +DV   N MI  Y   G ++
Sbjct: 155 GCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD 214

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            +F +F  +L     P+ YT  +V+    E  G+    Q+HG+  + G      V   ++
Sbjct: 215 DSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLI 274

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG-HGGKAINGFLEFLDLGICCDS 361
             Y K+G    A+ +   + +++L S TALI+GY   G +   A++ F E   + I  D 
Sbjct: 275 NAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDD 334

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             L ++++ C+  ++  LG Q+H FA+K+    DV +G AL+D+YAK G+++ A+   D 
Sbjct: 335 VILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDE 394

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA-----S 476
              K    + +++SG+ +         + L+ +    G +P+ VTF  LL   +     +
Sbjct: 395 MEEKNVISWTSLISGYAKH--GYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTA 452

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNA 535
           + C      ++ Y+IK          + ++ ++A+ G ++ A+ +   I  +   S W A
Sbjct: 453 EGCECFNNMVNKYNIKPRAEHY----SCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGA 508

Query: 536 MLSAYALHG---LGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
           +L A +++G   LGK A      M+ E       S+  V+ A IYS
Sbjct: 509 ILGASSIYGYMSLGKEAASNLFNMQPEN------SVNYVVLASIYS 548



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 235/477 (49%), Gaps = 7/477 (1%)

Query: 166  LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
            L+  S +  ++ G+ +HAF I       +F   +LI+MY   G    A  VF  + +++ 
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 226  RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN-LGVEEGKQLHG 284
               + M+  Y + G  E A  +F  +     EPN +   ++I+ C  +    +EG Q+HG
Sbjct: 811  ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 285  LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
              VK G++ ++ VG A+V  YG  G+   A+++F+ + + N++SWT+L+ GY  SG+ G+
Sbjct: 871  FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930

Query: 345  AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
             +N +      G+  + +  ATV   C +  +  LG Q+ G  I++G+   V +  +L+ 
Sbjct: 931  VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 990

Query: 405  IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
            +++    ++ A  + D  +      +NA++S +       E   +  F   R    E + 
Sbjct: 991  MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRES--LRCFHWMRHLHNETNS 1048

Query: 465  VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
             T S LLS+ +S   L  GR +H   +K G  ++V + N L+T+Y++ G  + A  +F+ 
Sbjct: 1049 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 1108

Query: 525  ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG-LSEG 583
            +++RD++SWN+M++ Y   G     L +  E+ + G   + ++    L AC     L E 
Sbjct: 1109 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 1168

Query: 584  GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
             I   + +  + G    L     +V + G+ G + EA  ++ + P  +  + W  L+
Sbjct: 1169 KI--VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDR-VTWNALI 1222



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 163/330 (49%), Gaps = 10/330 (3%)

Query: 251 LLSSD---FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           LLSS+    +P+ Y    ++ +C +    ++G  +H   +  G   ++ +   ++  Y K
Sbjct: 20  LLSSNPTRLDPSLYL--KILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVK 77

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G    A  +FD + ER+++SWTA++SGY ++G   KA   F +    G+  +     + 
Sbjct: 78  VGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSA 137

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C+    L++G+Q+ G   K  ++ ++ + +ALVD ++K G ++ A  L      +  
Sbjct: 138 LRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDV 197

Query: 428 AEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
             +NA++ G+ ++  ADD      +F      G+ PD  T   +L  SA    L+    +
Sbjct: 198 VSWNAMIGGYAVQGFADDS---FCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQI 254

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL- 545
           H    + GY +  IV   LI  YAK GS+  A  + KG+  +D+ S  A+++ YA  G+ 
Sbjct: 255 HGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIY 314

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQAC 575
              AL LF+EM +     DD+ +  +L  C
Sbjct: 315 SVDALDLFKEMNQMNIGMDDVILCSMLNIC 344



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 1/164 (0%)

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           DP  + ++L L   +    +G  +H + I  G+ +D+ +   LI  Y K G +  A  +F
Sbjct: 29  DPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVF 88

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
            G+ +R +VSW AM+S Y+ +G  + A +LF +M+  G   +  +    L+AC      +
Sbjct: 89  DGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLD 148

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
            GI +   I++   +  +    A +VD   + G++ +A  L  +
Sbjct: 149 MGIQVQGCIQKGRFVENLFVKSA-LVDFHSKCGKMEDASYLFGT 191


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 167/487 (34%), Positives = 285/487 (58%), Gaps = 8/487 (1%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           + +V++ C     + EG+++H   +K      + +   ++ +Y K     +A R+ D + 
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ERN++SWTA+ISGY + G+  +A++ F+E L  G   +    ATV+  C+  S  +LG Q
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H   IK  + S + +G++L+D+YAK G +  AR + DG   +      AI+SG+ +   
Sbjct: 600 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 659

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D+E   + LF + +  GM  + VT++ +L+  +  A L  GR +H++ ++      V++ 
Sbjct: 660 DEE--ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQ 717

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-F 561
           N+LI MY+KCGS+  + +IF  + +R ++SWNAML  Y+ HGLG+ A+ LF+ MK E   
Sbjct: 718 NSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKV 777

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNE-IEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            PD ++ L VL  C + G+ + G+ +F E + Q  G  P +EH+ C+VDL GRAGR+ EA
Sbjct: 778 KPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 837

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
              I   PF  +  +W +L+   ++  N       ++RLL++E ++AG+++++SN+YA  
Sbjct: 838 FEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASA 897

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           G  D+   VR  M +  + KE G SWIE+D  LH F AS + HP  EE+++K+     E+
Sbjct: 898 GRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKV----REL 953

Query: 741 KLKVKDS 747
            +K+K++
Sbjct: 954 SIKIKEA 960



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 188/369 (50%), Gaps = 4/369 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+++HA  IK+ +E  V++ T LI +Y    C  +A  V   +  ++V     MI  Y++
Sbjct: 496 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 555

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G +  A H+FV +L S   PN++TF  V++ C  + G + G+Q+H L +K      I V
Sbjct: 556 RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 615

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G++++ MY K G   EA R+FD + ER+++S TA+ISGY + G   +A++ F      G+
Sbjct: 616 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 675

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +    A+V+   S  + L+ G Q+H   ++      V L  +L+D+Y+K G L  +R 
Sbjct: 676 RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRR 735

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    +    +NA+L G+  K     E V +    +    ++PD VTF  +LS  +  
Sbjct: 736 IFDSMPERTVISWNAMLVGY-SKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHG 794

Query: 478 ACLVRGRSLHAYSI--KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WN 534
               RG  +    +  K G+  ++     ++ ++ + G ++ AF+  K +      + W 
Sbjct: 795 GMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWG 854

Query: 535 AMLSAYALH 543
           ++L A  +H
Sbjct: 855 SLLGACRVH 863



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 201/410 (49%), Gaps = 11/410 (2%)

Query: 16  SQQSLPPLKKKVPINTFSPNPKSQVAYLCS-------ISSVSCSERTLLFNDWPQLVKIS 68
           S  S P  ++++ ++TF  N    +  LCS       +  +      + F  +  ++   
Sbjct: 429 SSISNPFSRQRILLSTFPAN-SPDLKTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTEC 487

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           I    ++ GQ VHA ++K+  +   +    LI LY K   L  A+++ D M  R+ ++WT
Sbjct: 488 ISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWT 547

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++I GY   G     L +  +M  S    NE T + +L +C+       G QIH+  IK+
Sbjct: 548 AMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKT 607

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            FE+++FVG+SL+ MY  +G   EA  VF GL  +DV     +I  Y + G  E A  +F
Sbjct: 608 SFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLF 667

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             L       N  T+ +V++       ++ G+Q+H   ++  +   + + N+++ MY K 
Sbjct: 668 RRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKC 727

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF-LEFLDLGICCDSSCLATV 367
           G    + R+FD++ ER +ISW A++ GY + G G +A+  F L   +  +  DS     V
Sbjct: 728 GSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAV 787

Query: 368 IDGCSVCSNLELGLQLHGFAI--KHGYLSDVRLGTALVDIYAKGGDLKSA 415
           + GCS     + GL++    +  K G+  ++     +VD++ + G ++ A
Sbjct: 788 LSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 837



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 7/175 (4%)

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           + G+E +   +  +L+   SQ  +  G+ +HA+ IKT Y   V +   LI +Y KC  + 
Sbjct: 470 IQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLG 529

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A ++   + +R++VSW AM+S Y+  G    AL LF EM   G AP++ +   VL +C 
Sbjct: 530 DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 589

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHF---ACMVDLLGRAGRLSEAMNLINSSP 628
               S  G  L  +I  +        H    + ++D+  +AG++ EA  + +  P
Sbjct: 590 ----SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 200/675 (29%), Positives = 354/675 (52%), Gaps = 14/675 (2%)

Query: 73   DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR-SAITWTSLI 131
            D    +  H  + +SG   D    N +I++YAK      A  +F  +  +   I+W +++
Sbjct: 350  DFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTML 409

Query: 132  KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI---KS 188
                D   +  V+     M  +    N+ +   IL ACS  E   FG +IH+  +   + 
Sbjct: 410  GASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRD 469

Query: 189  GFENNVFVGTSLISMYFHSGCFREAENVFR--GLAYKDVRCVNFMILEYNKAGESEMAFH 246
              E++V   T L+SMY   G   EAE VF+   L  + +   N M+  Y +   S+ AF 
Sbjct: 470  YVESSV--ATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFG 527

Query: 247  VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
              + +L     P+  +FT+V+S CY +   +E + L    ++ G  R   +  A+++M+G
Sbjct: 528  ALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLRMCILESGY-RSACLETALISMHG 583

Query: 307  KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
            +    E+A  +F+ +   +++SWTA++S    +    +  N F      G+  D   LAT
Sbjct: 584  RCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLAT 643

Query: 367  VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
             +D C   + L LG  +H    + G  +D+ +  AL+++Y+  GD + A    +    + 
Sbjct: 644  TLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARD 703

Query: 427  TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
               +N + + + +  A   ++ ++LF Q +L G++PD +TFS  L++S   A +  G+  
Sbjct: 704  LVSWNIMSAAYAQ--AGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLF 761

Query: 487  HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
            HA + ++G  +DV V   L+ +YAKCG +D A  +F+G  D  +V  NA++ A A HG  
Sbjct: 762  HALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFS 821

Query: 547  KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
            + A+ +F +M++EG  PD  +++ ++ AC ++G+ E G   F  +++ +G+ P LEH+AC
Sbjct: 822  EEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYAC 881

Query: 607  MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
             VDLLGRAG+L  A  +I   PF ++ L+W +L+   KL  +++     ++R+L+L+P +
Sbjct: 882  FVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHN 941

Query: 667  AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
            + + +++SN+Y   G   +A   R  M D  +    G SW EI  ++H FVA  + HP++
Sbjct: 942  SAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKT 1001

Query: 727  EEIYSKLDLLNDEMK 741
            +EIY  LD L   M+
Sbjct: 1002 DEIYVVLDKLELLMR 1016



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 176/624 (28%), Positives = 285/624 (45%), Gaps = 33/624 (5%)

Query: 38  SQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEAN 97
           S +  LCS+S     +R     ++  L++  + S DL  G+  H  +  +G +   F  N
Sbjct: 5   SIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGN 64

Query: 98  NLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM-YRSEEK 156
            LIN+Y +   L+ A  +F  M  R+ ++WT+LI      G +     +   M   S   
Sbjct: 65  CLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAA 124

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE----NNVFVGTSLISMYFHSGCFRE 212
            N +T   +L AC+   D   G  IHA   + G E        VG ++I+MY   G   +
Sbjct: 125 PNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLED 184

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEM---AFHVFVHLLSSDFEPNDYTFTNVISV 269
           A  VF  +  KDV  V++  +    A E      A  +F  +L     PN  TF   +  
Sbjct: 185 AIAVFLAIPEKDV--VSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGA 242

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER---NL 326
           C     + +G  LH L  +  +  +    NA++ MYGK G  E A  +F A++ R   +L
Sbjct: 243 C---TSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDL 299

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ--LH 384
           +SW A+IS  V +G  G A+  F      G+  +S  L T+++  +  S ++ G     H
Sbjct: 300 VSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAA-SGVDFGAARGFH 358

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY-TAEFNAILSGFMEKIAD 443
           G   + GYL DV +G A++ +YAK G   +A  +      K     +N +L    ++ + 
Sbjct: 359 GRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSF 418

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI--KTGYAADVIV 501
            +  V+  F    LAG++P+ V+F  +L+  ++   L  GR +H+  +  +  Y  +  V
Sbjct: 419 GK--VVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY-VESSV 475

Query: 502 GNALITMYAKCGSIDGAFQIFK--GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
              L++MY KCGSI  A  +FK   +  R +V+WN ML AYA +   K A     EM + 
Sbjct: 476 ATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQG 535

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
           G  PD +S   VL +C  S   E  +     +E  Y     LE    ++ + GR   L +
Sbjct: 536 GVLPDALSFTSVLSSCYCS--QEAQVLRMCILESGY-RSACLE--TALISMHGRCRELEQ 590

Query: 620 AMNLINSSPFSESPLLWRTLVSVS 643
           A ++ N     +  + W  +VS +
Sbjct: 591 ARSVFNEMDHGD-VVSWTAMVSAT 613



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 192/393 (48%), Gaps = 18/393 (4%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +T ++  C ++  + +GK  H L    G+ + + +GN ++ MY + G  EEA  +F  + 
Sbjct: 28  YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLE-FLDLGICCDSSCLATVIDGCSVCSNLELGL 381
           ERN++SWTALIS   + G   +A   F    L+     +S  L  +++ C+   +L +G 
Sbjct: 88  ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 382 QLHG----FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
            +H       ++    +   +G A++++YAK G L+ A  +      K    + A+   +
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC--LVRGRSLHAYSIKTGY 495
            ++      D + +F +  L  + P+ +TF     ++A  AC  L  G  LH+   +   
Sbjct: 208 AQE-RRFYPDALRIFREMLLQPLAPNVITF-----ITALGACTSLRDGTWLHSLLHEASL 261

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDR---DIVSWNAMLSAYALHGLGKGALLL 552
             D +  NALI MY KCG  +GA+ +FK ++ R   D+VSWNAM+SA    G    A+ +
Sbjct: 262 GFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN-EIEQIYGLRPILEHFACMVDLL 611
           F  ++ EG  P+ ++++ +L A   SG+  G    F+  I +   LR ++   A ++ + 
Sbjct: 322 FRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNA-IISMY 380

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
            + G  S A  +     +    + W T++  S+
Sbjct: 381 AKCGFFSAAWAVFRRIRWKCDVISWNTMLGASE 413



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 8/270 (2%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           + S  L LG+ +HA + + G + D    N L+N+Y+       A   F+ M  R  ++W 
Sbjct: 649 LASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWN 708

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE---ACSLLEDRIFGEQIHAFA 185
            +   Y   G  +  + +   M     K ++ T S  L      +L+ D   G+  HA A
Sbjct: 709 IMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSD---GKLFHALA 765

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
            +SG +++V V T L+ +Y   G   EA ++FRG     V  +N +I    + G SE A 
Sbjct: 766 AESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAV 825

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTM 304
            +F  +      P+  T  ++IS C     VEEG      +   FG+   +      V +
Sbjct: 826 KMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDL 885

Query: 305 YGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            G+ G  E AE++   +  E N + WT+L+
Sbjct: 886 LGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 12/213 (5%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           + +S GS  +  G+  HA   +SG  +D   A  L+ LYAK  +LD A  LF G    + 
Sbjct: 746 LNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTV 805

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRI--FGE 179
           +   ++I      G  E  + +   M +   + +  T   I+ AC    ++E+    F  
Sbjct: 806 VLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLT 865

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK-A 238
               F I    E+        + +   +G    AE + R + ++D   V   +L   K  
Sbjct: 866 MKEYFGISPTLEHY----ACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQ 921

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           G++E+       +L  + +P++     V+S  Y
Sbjct: 922 GDAELGERCAQRIL--ELDPHNSAAHVVLSNIY 952


>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 196/630 (31%), Positives = 319/630 (50%), Gaps = 67/630 (10%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFR----------------------------- 211
           +HA  IKSGF N VF+   LI  Y   G                                
Sbjct: 42  VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101

Query: 212 --EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             EA+++FR +  +D    N M+  + +    E A + F  +    F  N+YTF + +S 
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C     +  G Q+H L  K   + ++ +G+A+V MY K G   +A+++FD + +RN++SW
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            +LI+ Y ++G   +A+  F   L+  +  D   LA+VI  C+  S +++G ++H   +K
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281

Query: 390 HGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF----------- 437
              L +D+ L  A VD+YAK   +K AR + D    +      +++SG+           
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARL 341

Query: 438 -MEKIAD-----------------DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
              K+A+                 + E+ + LF   +   + P   TF+ +L   A  A 
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLAD 401

Query: 480 LVRGRSLHAYSIKTGYA------ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
           L  G   H + +K G+        D+ VGN+LI MY KCG ++  + +F+ + +RD VSW
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           NAM+  +A +G G  AL LF EM   G  PD I+++GVL AC ++G  E G   F+ + +
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            +G+ P+ +H+ CMVDLLGRAG L EA ++I   P     ++W +L++  K+  N     
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGK 581

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
             +++L ++E  ++G ++L+SNMYA  G   +A  VR  M    ++K+ GCSWI+I    
Sbjct: 582 YVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHA 641

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMKLK 743
           H F+   K HP  ++I+S LD+L  EM+ K
Sbjct: 642 HVFMVKDKSHPRKKQIHSLLDILIAEMRQK 671



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 150/552 (27%), Positives = 258/552 (46%), Gaps = 80/552 (14%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K+ + + D++    VHA ++KSG  N+ F  N LI+ YAK   L+  ++LFD M  R+ 
Sbjct: 30  IKLKLSAIDVR---CVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNV 86

Query: 125 ITWTSLIK-----GYLDDGD-------------YESVLGIACDMYRSEEK---------- 156
            TW S++      G+LD+ D             + S++       R EE           
Sbjct: 87  FTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKE 146

Query: 157 ---FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
               NE+T +  L ACS L D   G QIH+   KS   ++V++G++L+ MY   G   +A
Sbjct: 147 GFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDA 206

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
           + VF  +  ++V   N +I  Y + G +  A  VF  +L S  EP++ T  +VIS C   
Sbjct: 207 QQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASL 266

Query: 274 LGVEEGKQLHGLAVKFGVVR-EISVGNAIVTMYGKHGMSEEAERMFDA------------ 320
             ++ G+++H   VK   +R +I + NA V MY K    +EA  +FD+            
Sbjct: 267 SAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326

Query: 321 -------------------ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
                              ++ERN++SW ALI+GY ++G   +A++ F       +C   
Sbjct: 327 VSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYL------SDVRLGTALVDIYAKGGDLKSA 415
              A ++  C+  ++L LG+Q H   +KHG+        D+ +G +L+D+Y K G ++  
Sbjct: 387 YTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
            ++      +    +NA++ GF +    +E   + LF +   +G +PD +T   +LS   
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNE--ALELFREMLDSGEKPDHITMIGVLSACG 504

Query: 476 SQACLVRGRSLHAYSIKT---GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIV 531
               +  GR  H +S  T   G A        ++ +  + G ++ A  I + +    D V
Sbjct: 505 HAGFVEEGR--HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSV 562

Query: 532 SWNAMLSAYALH 543
            W ++L+A  +H
Sbjct: 563 IWGSLLAACKVH 574



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 173/377 (45%), Gaps = 66/377 (17%)

Query: 263 FTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           F  ++  C +  L   + + +H   +K G   E+ + N ++  Y K G  E+  ++FD +
Sbjct: 22  FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81

Query: 322 SERNLISWTALISGYVRSGHGGKA------------------INGF---------LEFLD 354
            +RN+ +W ++++G  + G   +A                  ++GF         L +  
Sbjct: 82  PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141

Query: 355 L----GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
           +    G   +    A+ +  CS  +++  G+Q+H    K   LSDV +G+ALVD+Y+K G
Sbjct: 142 MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCG 201

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
           ++  A+ + D    +    +N++++ + +     E   + +F     + +EPD VT + +
Sbjct: 202 NVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVE--ALKVFQVMLESWVEPDEVTLASV 259

Query: 471 LSLSASQACLVRGRSLHAYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQIFKG----- 524
           +S  AS + +  G+ +HA  +K      D+I+ NA + MYAKC  I  A  IF       
Sbjct: 260 ISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319

Query: 525 --------------------------ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
                                     +++R++VSWNA+++ Y  +G  + AL LF  +KR
Sbjct: 320 VIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379

Query: 559 EGFAPDDISILGVLQAC 575
           E   P   +   +L+AC
Sbjct: 380 ESVCPTHYTFANILKAC 396


>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 183/585 (31%), Positives = 319/585 (54%), Gaps = 14/585 (2%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           N   C   L++C+  ++   G+Q+H+  I  GF  +    TSLI+MY   G   EA  VF
Sbjct: 10  NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69

Query: 218 RGLAY-KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
               + ++V   N +I  +   G +   F  +  +      P+ YTF  V+  C E   V
Sbjct: 70  YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE---V 126

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
            E K++HG  +K G+  ++ VG+A+V  Y K+G  E+A+++F  +S R+++ W A+I+GY
Sbjct: 127 MEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGY 186

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            + G   +A+  F      G+      +  ++   +   +L+ G  +HG  +K GY S V
Sbjct: 187 AKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGV 246

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  AL+D+Y K   +  A ++ +  + K    +N+I+S  + +   D +  + LF +  
Sbjct: 247 SVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIIS--VHEQCGDHDGTLRLFDKML 304

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD--------VIVGNALITM 508
            +G+ PD VT + +L   +  A L+ GR +H Y I  G   D        ++V NA++ M
Sbjct: 305 GSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDM 364

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           YAKCGS++ A +IF  +S +D+ SWN M+  Y +HG    AL +F +M    F P+++++
Sbjct: 365 YAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTL 424

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
           +GVL AC ++G    G     ++E  +G+ P +EH+ C++D+LGRAG L +A  ++   P
Sbjct: 425 VGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMP 484

Query: 629 FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAK 688
              +P++WR L+   +L  N++ + +A++++L LEP+  GS++L+SN+Y   G  +E  +
Sbjct: 485 IQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLE 544

Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           VR TM +  + K  GCSWIE+   +H F    + H E   + ++L
Sbjct: 545 VRKTMKEQNVKKTPGCSWIELKDGVHVFRTGDRTHSELNALTNQL 589



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 237/484 (48%), Gaps = 18/484 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF-DGMLVRSAITWTSLI 131
           +L  G+ +H+ ++  G         +LIN+Y+K  ++  A  +F D    R+   + ++I
Sbjct: 26  NLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAII 85

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G++ +G           M       +++T   ++  C  + +    ++IH   +K G E
Sbjct: 86  SGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHGCLLKMGLE 142

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VFVG++L++ Y  +G   +A+ VF  L+ +DV   N MI  Y K G  + A  VF  +
Sbjct: 143 LDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRM 202

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P+ +T T ++SV      ++ GK +HG+ +K G    +SV NA++ MYGK    
Sbjct: 203 HVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHI 262

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +A  +F+ I+E+++ SW ++IS + + G     +  F + L  GI  D   + TV+  C
Sbjct: 263 GDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPAC 322

Query: 372 SVCSNLELGLQLHGFAI--------KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           S  + L  G ++HG+ I        ++G + ++ +  A++D+YAK G + +A  + D  S
Sbjct: 323 SHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMS 382

Query: 424 CKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
            K  A +N ++ G+ M   A    + + +FSQ   A  +P+ VT   +LS       +  
Sbjct: 383 KKDVASWNIMIMGYGMHGYA---LEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSH 439

Query: 483 GRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAY 540
           GR   A    T G    +     +I M  + G ++ A++I + +    + V W A+L A 
Sbjct: 440 GRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGAC 499

Query: 541 ALHG 544
            LHG
Sbjct: 500 RLHG 503



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 10/272 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL  G+ VH  ++K G  +    +N LI++Y K   +  A  +F+ +  +   +W S+I
Sbjct: 225 GDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSII 284

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF- 190
             +   GD++  L +   M  S    +  T + +L ACS L   + G +IH + I +G  
Sbjct: 285 SVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLG 344

Query: 191 ---EN----NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
              EN    N+ V  +++ MY   G    A  +F  ++ KDV   N MI+ Y   G +  
Sbjct: 345 KDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALE 404

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIV 302
           A  +F  +  ++F+PN+ T   V+S C     V  G+  L  +   FGV+  I     ++
Sbjct: 405 ALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVI 464

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            M G+ G  E+A  +   +  + N + W AL+
Sbjct: 465 DMLGRAGHLEDAYEIVQKMPIQANPVVWRALL 496


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 194/647 (29%), Positives = 338/647 (52%), Gaps = 6/647 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +H+ + K+G ++D   +  LIN+Y K   L++A+K+F+ M  R+ ++WT++I G
Sbjct: 168 LEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISG 227

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+  GD +    +   + RS  + N+ + + IL AC+   D   G ++HA+  ++G E  
Sbjct: 228 YVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQE 287

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V VG +LISMY   G    A  VF  L   +    N MI  Y + G  E AF +F  +  
Sbjct: 288 VLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQ 346

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
             F+P+ +T+ +++++C +   +  GK+LH   V+     +++V  A+++MY K G  EE
Sbjct: 347 KGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEE 406

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++F+ + E+N +SW A I+   R G   +A   F +     +  D     T+++ C+ 
Sbjct: 407 ARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTS 466

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             + E G  +HG   + G LS+  +  AL+ +Y + G L  AR +      +    +NA+
Sbjct: 467 PEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAM 526

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++ +++  A+       LF + +  G + D  TF  +L   A+   L  GR +H    K 
Sbjct: 527 IAAYVQHGANG--SAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKA 584

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G   D+ +   LI MY+KCGS+  A+ +FK + ++D+V WNAML+AY     G+ AL LF
Sbjct: 585 GLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLF 644

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           ++M+ EG  PD  +   VL AC   G  E G     ++++   +     H+ACMV  LGR
Sbjct: 645 QQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLKEA-AMETDTRHYACMVAALGR 703

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI-L 672
           A  L EA   I         L+W +L+   ++  N   +  A + LLD++ + + +    
Sbjct: 704 ASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQSSPAVCEQ 763

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           + N+YA  G  ++ + ++ TM +  L     C+ IE++S+ H F+ +
Sbjct: 764 LMNIYAAAGRWEDVSVIKATMREAGLLAPKSCT-IEVNSEFHTFMTN 809



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 179/640 (27%), Positives = 317/640 (49%), Gaps = 8/640 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
            N + + ++  + +  L  G+ VH  +  +  + D +  N LI++Y+K   ++ A  +F 
Sbjct: 51  LNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQ 110

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  +  ++W ++I GY   G  +  + +   M R   K N+++   IL AC       F
Sbjct: 111 SMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEF 170

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           GEQIH+   K+G+E++V V T+LI+MY   G    A  VF  +  ++V     MI  Y +
Sbjct: 171 GEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQ 230

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G+S+ AF +F  L+ S  +PN  +F +++  C     +E+G +LH    + G+ +E+ V
Sbjct: 231 HGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLV 290

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA+++MY + G    A ++FD +   N +SW A+I+GY   G   +A   F +    G 
Sbjct: 291 GNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGY-GEGFMEEAFRLFRDMQQKGF 349

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D    A+++  C+  ++L  G +LH   ++  + +DV + TAL+ +YAK G L+ AR 
Sbjct: 350 QPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARK 409

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +    K    +NA ++         E++   +F Q R   + PD VTF  LL+   S 
Sbjct: 410 VFNQMPEKNAVSWNAFIACCCRH--GSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSP 467

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
               RGR +H    + G  ++ +V NALI+MY +CG +  A ++F  I  RD+ SWNAM+
Sbjct: 468 EDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMI 527

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +AY  HG    A  LF + K EG   D  + + VL+A       + G  +   +E+  GL
Sbjct: 528 AAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKA-GL 586

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK--FSILA 655
              +     ++ +  + G L +A ++  +    +  + W  +++      + +    +  
Sbjct: 587 EKDIRILTTLIKMYSKCGSLRDAYSVFKNVQ-EKDVVCWNAMLAAYNHSDHGQDALKLFQ 645

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
             RL  + P D+ ++  V N  A  G ++   K  T + +
Sbjct: 646 QMRLEGVNP-DSATYTSVLNACARLGAIEHGKKFHTQLKE 684



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 186/403 (46%), Gaps = 12/403 (2%)

Query: 25  KKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQ------------LVKISIGSG 72
           ++V  N  SPN  S  A +         E   LF D  Q            L+ I     
Sbjct: 308 RQVFDNLRSPNRVSWNAMIAGYGEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRA 367

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL  G+ +H+ ++++  + D   A  LI++YAK   L+ A+K+F+ M  ++A++W + I 
Sbjct: 368 DLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIA 427

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
                G  +    +   M R +   +  T   +L +C+  ED   G  IH    + G  +
Sbjct: 428 CCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLS 487

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N  V  +LISMY   G   +A  VF  +  +D+   N MI  Y + G +  AF +F+   
Sbjct: 488 NNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYK 547

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           S   + + YTF NV+        ++ G+++HGL  K G+ ++I +   ++ MY K G   
Sbjct: 548 SEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLR 607

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A  +F  + E++++ W A+++ Y  S HG  A+  F +    G+  DS+   +V++ C+
Sbjct: 608 DAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACA 667

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
               +E G + H    +    +D R    +V    +   LK A
Sbjct: 668 RLGAIEHGKKFHTQLKEAAMETDTRHYACMVAALGRASLLKEA 710



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 155/305 (50%), Gaps = 5/305 (1%)

Query: 338 RSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           R+   GK+I G ++ L   G+  + +  A  +  C    +L  G ++H       +  D+
Sbjct: 27  RNTWKGKSIRGGVQLLGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDI 86

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            L   L+ +Y+K G ++ A  +      K    +NA++SG+   +    ++ + LF Q +
Sbjct: 87  YLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYA--LHGRGQEAVDLFYQMQ 144

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
             G++P+  +F  +LS   +   L  G  +H++  K GY +DV V  ALI MY KCGS++
Sbjct: 145 REGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLE 204

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A ++F  + +R++VSW AM+S Y  HG  K A +LF+++ R G  P+ +S   +L AC 
Sbjct: 205 LARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACT 264

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
                E G+ L   I+Q  GL   +     ++ +  R G L+ A  + ++   S + + W
Sbjct: 265 NPNDLEQGLKLHAYIKQA-GLEQEVLVGNALISMYARCGSLANARQVFDNLR-SPNRVSW 322

Query: 637 RTLVS 641
             +++
Sbjct: 323 NAMIA 327



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 2/202 (0%)

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G++ +   ++R L        L  G+ +H +     +  D+ + N LI+MY+KCGSI+ A
Sbjct: 46  GVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDA 105

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
             +F+ + D+D+VSWNAM+S YALHG G+ A+ LF +M+REG  P+  S + +L AC   
Sbjct: 106 NNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTP 165

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
            + E G  + + I +  G    +     ++++  + G L  A  + N      + + W  
Sbjct: 166 IVLEFGEQIHSHITKA-GYESDVNVSTALINMYCKCGSLELARKVFNEMR-ERNVVSWTA 223

Query: 639 LVSVSKLMANSKFSILASKRLL 660
           ++S      +SK + +  ++L+
Sbjct: 224 MISGYVQHGDSKEAFVLFQKLI 245


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 193/631 (30%), Positives = 316/631 (50%), Gaps = 68/631 (10%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q HA  +K+G  N+  + T L+S Y ++ CF +A  V   +   +V   + +I  ++K 
Sbjct: 33  RQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKF 92

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            +   A   F  +L+    P++    + +  C     ++  +Q+HG+A   G   +  V 
Sbjct: 93  HQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG------------------ 340
           +++V MY K     +A R+FD + E +++SW+AL++ Y R G                  
Sbjct: 153 SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212

Query: 341 --------------HGGKAINGFLEFLDL---GICCDSSCLATVIDGCSVCSNLELGLQL 383
                         H G      L FLD+   G   D + +++V+       +L +G+ +
Sbjct: 213 PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF------ 437
           HG+ IK G +SD  + +AL+D+Y K         + D          NA + G       
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332

Query: 438 ------MEKIADD---------------------EEDVMVLFSQQRLAGMEPDPVTFSRL 470
                   ++ D                      + + + LF + ++AG++P+ VT   L
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCL 392

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           L    + A L+ G++ H +S++ G + DV VG+ALI MYAKCG I  +   F GI  +++
Sbjct: 393 LPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNL 452

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           V WNA+++ YA+HG  K A+ +F+ M+R G  PD IS   VL AC  SGL+E G   FN 
Sbjct: 453 VCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNS 512

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           +   YG+   +EH+ACMV LL RAG+L +A  +I   P +    +W  L+S  ++  N  
Sbjct: 513 MSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVS 572

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
              +A+++L +LEP + G++IL+SN+YA +GM +E  +VR  M +  L K  GCSWIE+ 
Sbjct: 573 LGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVK 632

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +K+H  +A  K HP+  +I   LD L+ EMK
Sbjct: 633 NKVHMLLAGDKSHPQMTQIIENLDKLSMEMK 663



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 128/546 (23%), Positives = 243/546 (44%), Gaps = 76/546 (13%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +  L   +  HA +LK+G  NDT  A  L++ YA       A  + D +   +  ++++L
Sbjct: 26  TASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTL 85

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  +     +   L     M       +       ++AC+ L       Q+H  A  SGF
Sbjct: 86  IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGL-------------AYKDVRCV--------- 228
           +++ FV +SL+ MY      R+A  VF  +             AY    CV         
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205

Query: 229 -------------NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
                        N MI  +N +G    A  +F+ +    FEP+  T ++V+    +   
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS------------- 322
           +  G  +HG  +K G+V +  V +A++ MYGK   + E  ++FD +              
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325

Query: 323 ----------------------ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
                                 E N++SWT++I+   ++G   +A+  F E    G+  +
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPN 385

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  +  ++  C   + L  G   H F+++ G  +DV +G+AL+D+YAK G ++++R+  D
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
           G   K    +NA+++G+   +    ++ M +F   + +G +PD ++F+ +LS + SQ+ L
Sbjct: 446 GIPTKNLVCWNAVIAGY--AMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLS-ACSQSGL 502

Query: 481 VRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAML 537
               S +  S+ + Y  +  V +   ++T+ ++ G ++ A+ + + +  + D   W A+L
Sbjct: 503 TEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALL 562

Query: 538 SAYALH 543
           S+  +H
Sbjct: 563 SSCRVH 568



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 182/443 (41%), Gaps = 76/443 (17%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P  VK   G   LK  + VH     SG  +D+F  ++L+++Y K N++  A ++FD M  
Sbjct: 118 PSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFE 177

Query: 122 RSAITWTSL-----------------------------------IKGYLDDGDYESVLGI 146
              ++W++L                                   I G+   G Y   + +
Sbjct: 178 PDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLM 237

Query: 147 ACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH 206
             DM+    + +  T S +L A   LED + G  IH + IK G  ++  V ++LI MY  
Sbjct: 238 FLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGK 297

Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV 266
             C  E   VF  + + DV   N  I   ++ G+ E +  +F  L     E N  ++T++
Sbjct: 298 CSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSM 357

Query: 267 ISVCYEN---------------LGVE--------------------EGKQLHGLAVKFGV 291
           I+ C +N                GV+                     GK  H  +++ G+
Sbjct: 358 IACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI 417

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
             ++ VG+A++ MY K G  + +   FD I  +NL+ W A+I+GY   G   +A+  F  
Sbjct: 418 STDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDL 477

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELG-LQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
               G   D      V+  CS     E G    +  + K+G  + V     +V + ++ G
Sbjct: 478 MQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG 537

Query: 411 DLKSA-----RMLLDGFSCKYTA 428
            L+ A     RM ++  +C + A
Sbjct: 538 KLEQAYAMIRRMPVNPDACVWGA 560



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 34/375 (9%)

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           + + +Q H   +K G+  +  +   +++ Y  +    +A  + D + E N+ S++ LI  
Sbjct: 29  LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYA 88

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           + +      A++ F + L  G+  D+  L + +  C+  S L+   Q+HG A   G+ SD
Sbjct: 89  FSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSD 148

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE---------- 445
             + ++LV +Y K   ++ A  + D         ++A+++ +  +   DE          
Sbjct: 149 SFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD 208

Query: 446 -----------------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                                   + +++F    L G EPD  T S +L        LV 
Sbjct: 209 SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVM 268

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G  +H Y IK G  +D  V +ALI MY KC       Q+F  +   D+ S NA +   + 
Sbjct: 269 GILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSR 328

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           +G  + +L LF ++K +G   + +S   ++  C  +G     + LF E+ QI G++P   
Sbjct: 329 NGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREM-QIAGVKPNSV 387

Query: 603 HFACMVDLLGRAGRL 617
              C++   G    L
Sbjct: 388 TIPCLLPACGNIAAL 402



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 3/228 (1%)

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S  ++L    Q H   +K G  +D  L T L+  YA       A ++LD         F+
Sbjct: 24  STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            ++  F +         +  FSQ    G+ PD       +   A  + L   R +H  + 
Sbjct: 84  TLIYAFSK--FHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS 141

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
            +G+ +D  V ++L+ MY KC  I  A ++F  + + D+VSW+A+++AYA  G    A  
Sbjct: 142 VSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKR 201

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           LF EM   G  P+ IS  G++    +SGL    + +F ++  + G  P
Sbjct: 202 LFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM-HLRGFEP 248



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 42/246 (17%)

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
            S Q LA +  D V  + L  L+++ A L + R  HA+ +KTG   D  +   L++ YA 
Sbjct: 3   LSAQALALL--DSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN 60

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
                 A  +   + + ++ S++ ++ A++       AL  F +M   G  PD+  +   
Sbjct: 61  NMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSA 120

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
           ++AC        G+       Q++G+  +                          S F  
Sbjct: 121 VKAC-------AGLSALKPARQVHGIASV--------------------------SGFDS 147

Query: 632 SPLLWRTLVSVSKLMANSKFSILASKRLLD--LEPKDAGSFILVSNMYAGQGMLDEAAKV 689
              +  +LV     M      I  + R+ D   EP D  S+  +   YA QG +DEA ++
Sbjct: 148 DSFVQSSLVH----MYIKCNQIRDAHRVFDRMFEP-DVVSWSALVAAYARQGCVDEAKRL 202

Query: 690 RTTMND 695
            + M D
Sbjct: 203 FSEMGD 208


>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 212/711 (29%), Positives = 347/711 (48%), Gaps = 37/711 (5%)

Query: 10  LQP-PFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKIS 68
           +QP P  SQ  L P    V + +  P P+  VA        +           P+L+ + 
Sbjct: 1   MQPSPTTSQLILLP----VSLGSALPQPREMVALHLHAKQPT-----------PRLLPVP 45

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
                 +   A    +  +    D       ++   K  RL  A  LFD M  ++ + WT
Sbjct: 46  PSHARTRTPTAAAVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWT 105

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           + I G   +G  E+   +  DM  S    N+  C+  L AC+       GEQ+H+ A+++
Sbjct: 106 TAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRA 165

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF  + ++G+ LI +Y   G  R AE VFR +   DV     ++    + GE   A  V 
Sbjct: 166 GFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVL 225

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +     +PN++T T++++ C   +G    +Q+HG  +K    + +    A++  Y ++
Sbjct: 226 CQMTRQGLQPNEHTMTSMLAECPRGIG----EQIHGYMLKVMGSQSVYASTALIDFYSRY 281

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A+ +F+ +  +N++SW +++   +R G    A+  F E +  G+  +    +  +
Sbjct: 282 GDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIAL 341

Query: 369 DGC-SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
             C SVC    LG Q+H  AIK   ++D+R+  AL+ +Y + G +     +L        
Sbjct: 342 SACGSVC----LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDL 397

Query: 428 AEFNAILS-----GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             + A +S     GF EK        + L  Q    G  P+   FS  LS  A  A L +
Sbjct: 398 VSWTAAISANFQNGFSEK-------AVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQ 450

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           GR LH  ++K G    V  GNALI MY+KCG I  A   F  +   D++SWN+++   A 
Sbjct: 451 GRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQ 510

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG    AL  F EM    + PDD + L VL  C ++GL + G   F ++   YGL P   
Sbjct: 511 HGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPS 570

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ACM+D+LGR GR +EA+ +I + PF    L+W+TL++  KL  N     LA+ +L++L
Sbjct: 571 HYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMEL 630

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
             +D+ S++L+SN+YA      +A +VR  M+++ + K+AG SWIE+ +++
Sbjct: 631 SERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEV 681


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 192/645 (29%), Positives = 341/645 (52%), Gaps = 3/645 (0%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N ++++  +F     A ++F  M  R   +W  ++ GY   G  +  L +   M  +  +
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            + +T   +L +C  + D   G ++HA  ++ GF   V V  +L++MY   G    A  V
Sbjct: 187 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKV 246

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  +   D    N MI  + + GE      +F+ +L  + +PN  T T+V         V
Sbjct: 247 FDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDV 306

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
              K++HGLAVK G   +++  N+++ MY   GM  +A  +F  +  R+ ++WTA+ISGY
Sbjct: 307 TFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGY 366

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            ++G   KA+  +       +  D   +A+ +  C+   +L++G++LH  A   G++S +
Sbjct: 367 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYI 426

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  A++++YAK   +  A  +      K    ++++++GF     + E    + + +  
Sbjct: 427 VVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEA---LYYFRHM 483

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           LA ++P+ VTF   L+  A+   L  G+ +HA+ ++ G   +  + NALI +Y KCG   
Sbjct: 484 LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTG 543

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A+  F     +D+VSWN M++ +  HG G  AL  F +M + G  PD+++ + +L AC 
Sbjct: 544 YAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACS 603

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
             G+   G  LF+ + + Y + P L+H+ACMVDLL RAG+L+EA N IN  P +    +W
Sbjct: 604 RGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVW 663

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             L++  ++  + +   LA+K +L LEP DAG  +L+ ++YA   + D+ A+VR TM + 
Sbjct: 664 GALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREK 723

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            L  ++GCSW+E+   +H F+   + HP+  EI + L+ + + MK
Sbjct: 724 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMK 768



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 226/484 (46%), Gaps = 5/484 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++   G  D ++G+ VHA +L+ G   +    N L+ +YAK   +  A+K+FD M V
Sbjct: 193 PCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTV 252

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              I+W ++I G+ ++G+  + L +   M   E + N  T + +  A  LL D  F +++
Sbjct: 253 MDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEM 312

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H  A+K GF  +V    SLI MY   G  R+A  VF  +  +D      MI  Y K G  
Sbjct: 313 HGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFP 372

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  V+  +  ++  P+D T  + ++ C     ++ G +LH LA   G +  I V NAI
Sbjct: 373 DKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAI 432

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K    ++A  +F  + E++++SW+++I+G+  +    +A+  F   L   +  +S
Sbjct: 433 LEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNS 491

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                 +  C+    L  G ++H   ++ G   +  L  AL+D+Y K G    A      
Sbjct: 492 VTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCA 551

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    +N +++GF+     D    +  F+Q    G  PD VTF  LL   +    + 
Sbjct: 552 HGAKDVVSWNIMIAGFVAHGHGDT--ALSFFNQMVKIGECPDEVTFVALLCACSRGGMVS 609

Query: 482 RGRSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
            G  L H+ + K     ++     ++ + ++ G +  A+     +    D   W A+L+ 
Sbjct: 610 EGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNG 669

Query: 540 YALH 543
             +H
Sbjct: 670 CRIH 673



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 196/392 (50%), Gaps = 17/392 (4%)

Query: 166 LEACSLLEDRIFGEQIHA-FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           L AC+  +DR      HA F ++        +G +++SM    G    A  VF  +  +D
Sbjct: 108 LRACAHADDR------HAWFGLR--------LGNAMLSMLVRFGETWHAWRVFAKMPERD 153

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V   N M+  Y K+G  + A  ++  ++ +   P+ YTF  V+  C        G+++H 
Sbjct: 154 VFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHA 213

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             ++FG   E+ V NA++TMY K G    A ++FD+++  + ISW A+I+G+  +G    
Sbjct: 214 HVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNA 273

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
            +  FL  L   +  +   + +V     + S++    ++HG A+K G+  DV    +L+ 
Sbjct: 274 GLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQ 333

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +YA  G ++ AR +      +    + A++SG+ +    D+   + +++   +  + PD 
Sbjct: 334 MYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDK--ALEVYALMEVNNVSPDD 391

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           +T +  L+  A    L  G  LH  +   G+ + ++V NA++ MYAK   ID A ++FK 
Sbjct: 392 ITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKC 451

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           + ++D+VSW++M++ +  +     AL  F  M
Sbjct: 452 MHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM 483



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 184/374 (49%), Gaps = 4/374 (1%)

Query: 251 LLSSDFEPNDY-TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           LL S  EP D   +  +  +C     VE G +    A        + +GNA+++M  + G
Sbjct: 78  LLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFG 137

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            +  A R+F  + ER++ SW  ++ GY +SG   +A++ +   +  G+  D      V+ 
Sbjct: 138 ETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLR 197

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C    +  +G ++H   ++ G+  +V +  AL+ +YAK GD+ +AR + D  +      
Sbjct: 198 SCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCIS 257

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA+++G  E    +    + LF       ++P+ +T + +   S   + +   + +H  
Sbjct: 258 WNAMIAGHFEN--GECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGL 315

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           ++K G+A DV   N+LI MYA  G +  A  +F  +  RD ++W AM+S Y  +G    A
Sbjct: 316 AVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKA 375

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L ++  M+    +PDDI+I   L AC   G  + G+ L +E+ +  G    +     +++
Sbjct: 376 LEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKL-HELAESKGFISYIVVTNAILE 434

Query: 610 LLGRAGRLSEAMNL 623
           +  ++ R+ +A+ +
Sbjct: 435 MYAKSKRIDKAIEV 448


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 185/586 (31%), Positives = 314/586 (53%), Gaps = 38/586 (6%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCF---REAENVFRGLAYKDVRCVNFMILEYNK 237
           IHA  IK+G  N  +  + LI     S  F     A +VF  +   ++   N M   +  
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           + +   A +++V ++S    PN YTF  ++  C ++    EG+Q+HG  +K G   ++ V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 298 GNAIVTMYGKHGMSEEA-------------------------------ERMFDAISERNL 326
             ++++MY ++G  E+A                               ++MFD I  +++
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           +SW A+ISGY  +G+  +A+  F E +   +  D S + +V+  C+  +++ELG Q+H +
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
              HG+ S++++  AL+D+Y K G++++A  L +G S K    +N ++ G+     +  +
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTH--MNLYK 303

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK--TGYAADVIVGNA 504
           + ++LF +   +G  P+ VT   +L   A    +  GR +H Y  K   G A       +
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           LI MYAKCG I+ A Q+F  I +R + SWNAM+  +A+HG    A  +F  M++    PD
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 423

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
           DI+ +G+L AC +SG+ + G  +F  +++ Y + P LEH+ CM+DLLG +G   EA  +I
Sbjct: 424 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 483

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
           N+       ++W +L+   K+  N +     ++ L+ +EPK+ GS++L+SN+YA  G  +
Sbjct: 484 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 543

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           E AK+R  +ND  + K  GCS IEIDS +H F+   K HP + EIY
Sbjct: 544 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 589



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 240/507 (47%), Gaps = 44/507 (8%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLIN---LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + +HA ++K+G  N  +  + LI    L   F+ L  A  +F+ +   + + W ++ +G+
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
               D  S L +   M       N +T   +L++C+  +    G+QIH   +K G++ ++
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123

Query: 195 FVGTSLISMYFHSGCFREAENVF--------------------RG-----------LAYK 223
           +V TSLISMY  +G   +A  VF                    +G           +  K
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV   N MI  Y + G ++ A  +F  ++ ++  P++ T  +V+S C ++  +E G+Q+H
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
                 G    + + NA++ +Y K G  E A  +F+ +S +++ISW  LI GY       
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTA 401
           +A+  F E L  G   +   + +++  C+    +E+G  +H +  K   G  +     T+
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGM 460
           L+D+YAK GD+++A+ + D    +  + +NA++ GF M   A+   D+   FS+ R   +
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDI---FSRMRKNEI 420

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGA 518
           EPD +TF  LLS  +    L  GR +   S+K  Y     + +   +I +    G    A
Sbjct: 421 EPDDITFVGLLSACSHSGMLDLGRHIFR-SMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 479

Query: 519 FQIFKGIS-DRDIVSWNAMLSAYALHG 544
            ++   +  + D V W ++L A  +HG
Sbjct: 480 EEMINTMEMEPDGVIWCSLLKACKMHG 506



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 191/429 (44%), Gaps = 45/429 (10%)

Query: 30  NTFSPNPKSQV-AYLCSISSVSCSERTLLFN--DWPQLVKISIGSGDLKLGQAVHAFLLK 86
           +  S +P S +  Y+C IS        LL N   +P L+K    S   + GQ +H  +LK
Sbjct: 63  HALSSDPVSALYLYVCMIS------LGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLK 116

Query: 87  SGSQNDTFEANNLINLYAKFNRLD-------------------------------VAQKL 115
            G   D +   +LI++Y +  RL+                                AQK+
Sbjct: 117 LGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKM 176

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FD + ++  ++W ++I GY + G+ +  L +  +M ++  + +E T   ++ AC+     
Sbjct: 177 FDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASI 236

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G Q+H++    GF +N+ +  +LI +Y   G    A  +F GL+YKDV   N +I  Y
Sbjct: 237 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGY 296

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
                 + A  +F  +L S   PND T  +++  C     +E G+ +H    K   GV  
Sbjct: 297 THMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVAN 356

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             S   +++ MY K G  E A+++FD+I  R+L SW A+I G+   G    A + F    
Sbjct: 357 ASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMR 416

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT--ALVDIYAKGGD 411
              I  D      ++  CS    L+LG  +   ++K  Y    +L     ++D+    G 
Sbjct: 417 KNEIEPDDITFVGLLSACSHSGMLDLGRHIFR-SMKEDYKITPKLEHYGCMIDLLGHSGL 475

Query: 412 LKSARMLLD 420
            K A  +++
Sbjct: 476 FKEAEEMIN 484


>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 695

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 206/664 (31%), Positives = 345/664 (51%), Gaps = 26/664 (3%)

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           K   L  A  LFD M  ++ + WTS + G   +G  E+ +    DM  S    N+   + 
Sbjct: 39  KSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNA 98

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
            L AC+       GEQ+H+ A+++GF  + +VG+SL+ +Y   G    A+ VF  +   D
Sbjct: 99  ALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPD 158

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     ++  + ++GE E+A      +L    EPN++T  +++  C   +    G+Q+H 
Sbjct: 159 VVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCPFV---LGEQVHA 215

Query: 285 LAVKFGVVREISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
             +K   +   S+   +A++  Y ++   + A+ +F+ +  +N+++W +++  ++R G  
Sbjct: 216 YMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRP 275

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
             A+  F + +  G+   +    ++  G   C ++ LG QLH  AIK    SD+R+  AL
Sbjct: 276 EDALQVFDDMISEGVVEPNEFAFSIALG--ACGSIALGRQLHSSAIKRNLTSDLRVSNAL 333

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS-----GFMEKIADDEEDVMVLFSQQRL 457
           + +Y +   ++    +L          +   +S     GF EK        + L S    
Sbjct: 334 LSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEK-------AIALLSMLHS 386

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
            G+ P+   FS  LS  A  A L +GR  H  ++K G    +  GNALI +Y+KCG I  
Sbjct: 387 RGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAP 446

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR-EGFAPDDISILGVLQACI 576
           A   F  +  RD+ SWN+++  YA HG    AL +F EM+   G  PD+ S LGVL AC 
Sbjct: 447 AKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACN 506

Query: 577 YSGLSEGGICLFNEI--EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           ++G+   G+ LF  I     +G  P   H+AC+VD++GR+GR  +A+ L+   PF    L
Sbjct: 507 HAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGAL 566

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDL----EPKDAGSFILVSNMYAGQGMLDEAAKVR 690
           +W+TL++  +L  N +   LA++RL++L    E +D+ S++L+S ++A +G   +A +VR
Sbjct: 567 IWKTLLASCRLHGNLETGELAAERLMELSEGGEDRDSASYVLMSGIHAMRGEWRDAYRVR 626

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAF 750
             M++  + KEAGCSW+E+ +++H FVA  K HP+S  IY  L  L D M+    D+   
Sbjct: 627 RRMDEAGVRKEAGCSWVEVHNEVHTFVARDKSHPDSASIYQILWELFDAMQDTACDAEDA 686

Query: 751 ELQD 754
           EL D
Sbjct: 687 ELFD 690



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 234/480 (48%), Gaps = 18/480 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VH+  +++G   D++  ++L+ LY++   L  A+ +FD M     + +TSL+  
Sbjct: 109 LRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSA 168

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG--FE 191
           +   G++E  +     M R   + NEHT + IL +C      + GEQ+HA+ IK+     
Sbjct: 169 FCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCPF---VLGEQVHAYMIKAMGLHS 225

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +++  ++LI  Y  +  F  A+ VF  L  K+V     M+  + + G  E A  VF  +
Sbjct: 226 QSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDM 285

Query: 252 LSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +S    EPN++ F+  +  C     +  G+QLH  A+K  +  ++ V NA+++MYG+   
Sbjct: 286 ISEGVVEPNEFAFSIALGACGS---IALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICH 342

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            +E E +   I   +++SWT  IS   ++G   KAI         G+  +    ++ +  
Sbjct: 343 VQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSS 402

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+  + L+ G Q H  A+K G    +  G AL+++Y+K G +  A++  D    +    +
Sbjct: 403 CADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSW 462

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQR-LAGMEPDPVTFSRLLSLSASQACLVRG----RS 485
           N+++ G+ +    D    + +F + R + G EPD  +F  +L+       +  G    R+
Sbjct: 463 NSLIHGYAQH--GDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRA 520

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD-IVSWNAMLSAYALHG 544
           + ++S + G          ++ M  + G  D A ++ + +  R   + W  +L++  LHG
Sbjct: 521 IASHS-QHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHG 579



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 128/274 (46%), Gaps = 6/274 (2%)

Query: 67  ISIGS-GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
           I++G+ G + LG+ +H+  +K    +D   +N L+++Y +   +   + +   +     +
Sbjct: 300 IALGACGSIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIV 359

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
           +WT+ I     +G  E  + +   ++      N++  S  L +C+ L     G Q H  A
Sbjct: 360 SWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLA 419

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           +K G +  +  G +LI++Y   G    A+  F  + ++DV   N +I  Y + G++ MA 
Sbjct: 420 LKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMAL 479

Query: 246 HVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLA--VKFGVVREISVGNAI 301
            VF  + S    EP++ +F  V++ C     V EG  L   +A   + G     S    +
Sbjct: 480 QVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACV 539

Query: 302 VTMYGKHGMSEEAERMFDAISER-NLISWTALIS 334
           V M G+ G  ++A R+ + +  R   + W  L++
Sbjct: 540 VDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLA 573



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 44/93 (47%)

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
           ++A QA L+   + H    +     +V+     +    K GS+  A  +F  +  ++IV+
Sbjct: 1   MAAMQAKLLPAPASHGRPRRRVEPPEVVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVA 60

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           W + +S    +G  + A+  F +M   G AP+D
Sbjct: 61  WTSAVSGLTRNGRPEAAMAAFADMVASGVAPND 93


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 200/672 (29%), Positives = 348/672 (51%), Gaps = 4/672 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L LG+ +H  ++  G + D    N L+++Y      D  + +F  M   S + WT++I G
Sbjct: 175 LDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAG 234

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
              +G YE  L +   M     K NE T   ++E C  L+    GE I A  ++S F ++
Sbjct: 235 CSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSS 294

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             + TSLIS+Y   G    A+ +   +  +DV   N M+    + G++  A H+   +  
Sbjct: 295 TLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDM 354

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMYGKHGMSE 312
             F  N  T+ +V+  C     + +G+++H   +  G++ RE++VGN+++TMYGK G +E
Sbjct: 355 EGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTE 414

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +F+A+  ++ +SW A+I+  V +     A+  F      G+  +   L ++++ C 
Sbjct: 415 AAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACG 474

Query: 373 VCSNLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
              +L+L  Q+H  A   G+  +   +G ++V++YA+ G L  A+   D    K    ++
Sbjct: 475 GLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWS 534

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            IL+ + +            F +    G++P  VTF   L   A+ A L  GRS+H  + 
Sbjct: 535 IILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAA 594

Query: 492 KTGYA-ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
            +G+    +++GN +I MY KCGS   A  +F  + ++ ++SWN+++ AYA +G    AL
Sbjct: 595 ASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEAL 654

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
              +EM  +GF PD  + + +L    ++GL E G+  F    Q +GL P      C+VDL
Sbjct: 655 SSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDL 714

Query: 611 LGRAGRLSEAMNLINSSPFSES-PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           L R G L  A  LI +SP  ++  + W TL++  K   + +  I  ++R+ +LEP+ +GS
Sbjct: 715 LARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGS 774

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           F++++N+YA  G   +A+++R  M  + + KE GCSWIE+   +H F++    HP+  EI
Sbjct: 775 FVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREI 834

Query: 730 YSKLDLLNDEMK 741
              L+ L   M+
Sbjct: 835 CEDLEKLTLRMR 846



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 156/643 (24%), Positives = 316/643 (49%), Gaps = 15/643 (2%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
            SG+L  G+ +H+ ++ SG  ++   +N+L+N+Y K   +  A+K+FDGML+R  ++WT+
Sbjct: 70  ASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTA 129

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           ++  Y  +G +   L     M     K N+ T   I++ C+ L     G +IH   I  G
Sbjct: 130 MLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEG 189

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E +  +G +L+ MY   G F + ++VF  +    V     MI   ++ G+ E    VF 
Sbjct: 190 LEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFR 249

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +     + N+ T+ +++ VC     V+EG+ +    ++        +  +++++YG+ G
Sbjct: 250 KMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCG 309

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVI 368
           + + A+ + + + +R++++W A+++   ++G   +AI+  L  +D+ G   +     +V+
Sbjct: 310 ILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIH-LLRRMDMEGFGANKVTYLSVL 368

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           + C+    L  G ++H   +  G L  +V +G +++ +Y K G  ++A  + +    K  
Sbjct: 369 EACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDD 428

Query: 428 AEFNAILSGFMEKIADDE-EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
             +NA+++     + + + +D + LF    L G+  +  T   LL        L   R +
Sbjct: 429 VSWNAVINA---SVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQI 485

Query: 487 HAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH-- 543
           HA +   G+  +   VGN+++ MYA+CGS+  A + F  + ++ +V+W+ +L+AYA    
Sbjct: 486 HARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKD 545

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G+ A   F+EM+ EG  P +++ +  L AC      E G  +         +   L  
Sbjct: 546 GPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVL 605

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
              ++++ G+ G  S+A  + +  P  +  + W +L+ V+          L+S + + L+
Sbjct: 606 GNTIINMYGKCGSPSDAKLVFDQMP-EKCLISWNSLI-VAYAHNGHALEALSSLQEMLLQ 663

Query: 664 PKDAGSFILVSNMY--AGQGMLDEAAK-VRTTMNDLRLSKEAG 703
             D  S   VS +Y  +  G+L+   +  R+++ D  L   +G
Sbjct: 664 GFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSG 706



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 237/486 (48%), Gaps = 25/486 (5%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y K  R+  A  +FDG+  ++  +WT ++  Y  +G Y   L +   M     + ++  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
             + L+AC+   +   G QIH+  + SG  +N+ +  SL++MY        AE VF G+ 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            +DV     M+  Y + G    A      + +   +PN  TF  ++ VC +   ++ G++
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +H   +  G+  +  +GNA+V MYG  G  ++ + +F  + + +++ WT +I+G      
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAG---CSQ 237

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR---- 397
            G+   G L F  + +    +   T +    VC NL+        A+K G + D R    
Sbjct: 238 NGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLD--------AVKEGEMIDARILES 289

Query: 398 -------LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
                  L T+L+ +Y + G L  A+ LL+    +    +NA+++   +    D  + + 
Sbjct: 290 PFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQN--GDNWEAIH 347

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAADVIVGNALITMY 509
           L  +  + G   + VT+  +L   A+   L +GR +HA  +  G    +V VGN++ITMY
Sbjct: 348 LLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMY 407

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
            KCG  + A  +F+ +  +D VSWNA+++A   +   + AL LF  M+ EG   ++ ++L
Sbjct: 408 GKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLL 467

Query: 570 GVLQAC 575
            +L+AC
Sbjct: 468 SLLEAC 473



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 234/488 (47%), Gaps = 16/488 (3%)

Query: 203 MYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYT 262
           MY       +A  VF G++ K+V     M+  Y++ G    A  +F  +      P+   
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           F   +  C  +  ++ G+Q+H   V  G+   I + N++V MYGK      AE++FD + 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
            R+++SWTA+++ Y ++G   +A+         G+  +     T++D C+    L+LG +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H   I  G   D  LG ALV +Y   G     + +           +  +++G  +   
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQN-- 238

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
              E+ +++F +  L G++ + VT+  ++ +  +   +  G  + A  +++ + +  ++ 
Sbjct: 239 GQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
            +LI++Y +CG +D A  + + +  RD+V+WNAM++A A +G    A+ L   M  EGF 
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358

Query: 563 PDDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLRPILEHFAC----MVDLLGRAGRL 617
            + ++ L VL+AC     LS+G      EI     L  +L+        ++ + G+ G+ 
Sbjct: 359 ANKVTYLSVLEACANLEALSQG-----REIHARVLLCGLLQREVAVGNSVITMYGKCGQT 413

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS-ILASKRLLDLEPKDAGSFILVSNM 676
             AM++  + P  +  + W  +++ S  + NSKF   L     ++LE   +  F L+S +
Sbjct: 414 EAAMSVFEAMP-RKDDVSWNAVINAS--VGNSKFQDALELFHGMELEGLRSNEFTLLSLL 470

Query: 677 YAGQGMLD 684
            A  G+ D
Sbjct: 471 EACGGLED 478


>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 631

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/637 (30%), Positives = 331/637 (51%), Gaps = 54/637 (8%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS-EEKFNEHTCSVILEACSLLEDRIF 177
           M  R+ I+W+S++  Y   G  E  L +  D  R   E  NE+  + ++ AC  +   I 
Sbjct: 1   MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSI- 59

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
            +Q+H FA+KSGF+ NV+VGTSL+ +Y   G   EA  VF GL  K       +I    K
Sbjct: 60  DKQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVK 119

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G SE++  +F  +  ++  P+ Y  ++V+  C +   V+ GKQ+HG  ++ G+  ++S 
Sbjct: 120 RGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSF 179

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N ++  Y K G  + A ++FD +++RN+ISWTA+I+GY+++    +A+  F+E   LG 
Sbjct: 180 VNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGR 239

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D     +++  C     LELG Q+H ++IK    SD+ L   L+D+YAK G L  AR 
Sbjct: 240 RPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARK 299

Query: 418 LLDGFSCKYTAEFNAILSGF--MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           + D  + +    +NA++ G+  +E+++    + M LF + R   + P  +TF  LL  SA
Sbjct: 300 VFDDMTIRNVVSYNALIEGYSTLEQLS----EAMNLFREMRHGMLSPSFLTFVSLLGASA 355

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           + + L  G+ +HA   K G + ++  G+ALI  Y+KC  +  A  +F  ++++DIV WNA
Sbjct: 356 TLSALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNA 415

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC----------------IYSG 579
           ML  Y      + AL L+ E++     P+ ++   +  A                 I +G
Sbjct: 416 MLFGYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTG 475

Query: 580 LS-----------------------------EGGICLFNEIEQIYGLRPILEHFACMVDL 610
           L                              + G+  F  + + + ++P  EH+AC+V L
Sbjct: 476 LDSHPFTTNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMPK-FSIKPGTEHYACVVSL 534

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGR+G+L EA   I   P     ++WR+L+S  ++  N +    A+++ + ++  D+GS+
Sbjct: 535 LGRSGKLYEAKEFIEKMPTEPEAVVWRSLLSACRVSGNVELGKYAAEKAISIDSTDSGSY 594

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
            L+SN+YA +GM  +  KVR  M+   + KEAG SWI
Sbjct: 595 TLLSNIYASKGMWVDVKKVRERMDIAGVVKEAGHSWI 631



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 173/340 (50%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +H  +L+ G + D    N LI+ Y K  ++  A+KLFDGM  R+ I+WT++I GY+ 
Sbjct: 161 GKQIHGHVLRRGIEIDVSFVNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQ 220

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +      + +  +M R   + +   C+ IL +C  LE    G Q+HA++IK   E+++F+
Sbjct: 221 NSFDREAVKLFIEMTRLGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFL 280

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              LI MY   G   +A  VF  +  ++V   N +I  Y+   +   A ++F  +     
Sbjct: 281 QNGLIDMYAKCGSLNDARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGML 340

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+  TF +++        +E GKQ+H L  KFG+  EI  G+A++  Y K     +A  
Sbjct: 341 SPSFLTFVSLLGASATLSALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARL 400

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD ++E++++ W A++ GY +     +A+  + E        +    A +    S  ++
Sbjct: 401 VFDKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLAS 460

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           L+ G Q H   IK G  S      +L+D+YAK G L+ AR
Sbjct: 461 LQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDAR 500



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 21/364 (5%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG+ VHA+ +K   ++D F  N LI++YAK   L+ A+K+FD M +R+ +++ +LI+G
Sbjct: 259 LELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVFDDMTIRNVVSYNALIEG 318

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y         + +  +M       +  T   +L A + L     G+QIHA   K G    
Sbjct: 319 YSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALELGKQIHALITKFGISME 378

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +F G++LI  Y    C  +A  VF  +  KD+   N M+  Y +  E+E A  ++  L  
Sbjct: 379 IFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQI 438

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           S+ +PN  TF  + +       ++ G+Q H   +K G+       N+++ MY K G  E+
Sbjct: 439 SEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLED 498

Query: 314 AERMFDAISE--------------RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A + F  + +                   +  ++S   RSG   +A   F+E   +    
Sbjct: 499 ARKAFGHVKDGLHYFESMPKFSIKPGTEHYACVVSLLGRSGKLYEA-KEFIE--KMPTEP 555

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG---DLKSAR 416
           ++    +++  C V  N+ELG      AI     +D    T L +IYA  G   D+K  R
Sbjct: 556 EAVVWRSLLSACRVSGNVELGKYAAEKAISIDS-TDSGSYTLLSNIYASKGMWVDVKKVR 614

Query: 417 MLLD 420
             +D
Sbjct: 615 ERMD 618


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 210/679 (30%), Positives = 335/679 (49%), Gaps = 44/679 (6%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+K   G  DL LG  +HA  +K+G + D    + L+++Y K   L+ A   F GM  R+
Sbjct: 169 LLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERN 228

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +++W ++I G + +  Y   L + C                    C  +       Q+HA
Sbjct: 229 SVSWGAVIAGCVQNEQYMRGLELLCR-------------------CKAITCLSTARQLHA 269

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK+ F ++  VGT+++ +Y  +    +A   F GL    V   N M++   + G    
Sbjct: 270 HAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAE 329

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +F  +  S       + + V S C E  G             F V  ++ V NAI+ 
Sbjct: 330 AMQLFQFMTRSGIGFGVVSLSGVFSACAEVKG-------------FDV--DVCVRNAILD 374

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           +YGK     EA  +F  + +R+ +SW  +I+   ++      I    E L  G+  D   
Sbjct: 375 LYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFT 434

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
             +V+  C+   +LE GL +HG AIK G   D  + + +VD+Y K G +  A  L D   
Sbjct: 435 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIG 494

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +N+I++GF   +    E+    FS+    G++PD  T++ +L   A+ A +  G
Sbjct: 495 GQELVSWNSIIAGF--SLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELG 552

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +H   IK     D  + + L+ MYAKCG++  +  +F+ +   D VSWNAM+  YALH
Sbjct: 553 KQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALH 612

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G  AL +FE  ++   AP+  + + VL+AC + GL + G   F+ +   Y L P LEH
Sbjct: 613 GQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEH 672

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           FACM           EA+  I S P     ++W+TL+S+ K+  + + +  A+  +L L+
Sbjct: 673 FACMGP--------QEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLD 724

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P D+  +IL+SN+YA  G   + ++ R  M   RL KE GCSWIE+ S++H F+   K H
Sbjct: 725 PDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEKVH 784

Query: 724 PESEEIYSKLDLLNDEMKL 742
           P S E+Y  L+ L  EMKL
Sbjct: 785 PRSREVYEMLNNLICEMKL 803



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 151/589 (25%), Positives = 247/589 (41%), Gaps = 111/589 (18%)

Query: 34  PNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDT 93
           P P +Q A+L           T  F+   QL   S G   L  GQA HA +L SG     
Sbjct: 19  PTP-AQAAFLA----------TATFSHVYQLCA-SAGHSALATGQAAHARMLVSGFVPTM 66

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS------------------------ 129
           F +N L+ +YA+      A  +FD M  R  ++W +                        
Sbjct: 67  FVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDP 126

Query: 130 -------LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
                  L+ GY   G +  ++G++ +M R     +  T +V+L+AC  L+D   G QIH
Sbjct: 127 DVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIH 186

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A A+K+G E +V  G++L+ MY       +A + F G+                      
Sbjct: 187 ALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMG--------------------- 225

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYEN----LGVE------------EGKQLHGLA 286
                         E N  ++  VI+ C +N     G+E              +QLH  A
Sbjct: 226 --------------ERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHAHA 271

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI 346
           +K     +  VG AIV +Y K     +A R F  +    + +  A++ G VR+G G +A+
Sbjct: 272 IKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAM 331

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
             F      GI      L+ V   C+         ++ GF +      DV +  A++D+Y
Sbjct: 332 QLFQFMTRSGIGFGVVSLSGVFSACA---------EVKGFDV------DVCVRNAILDLY 376

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
            K   L  A ++      + +  +N I++   +   +  ED +V  ++   +GME D  T
Sbjct: 377 GKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQN--ECYEDTIVHLNEMLRSGMEADDFT 434

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           +  +L   A    L  G  +H  +IK+G   D  V + ++ MY KCG I  A ++   I 
Sbjct: 435 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIG 494

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            +++VSWN++++ ++L+   + A   F EM   G  PD  +   VL +C
Sbjct: 495 GQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSC 543



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 169/368 (45%), Gaps = 54/368 (14%)

Query: 262 TFTNVISVCYE--NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
           TF++V  +C    +  +  G+  H   +  G V  + V N ++ MY + G +  A  +FD
Sbjct: 31  TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90

Query: 320 AISERN-------------------------------LISWTALISGYVRSGHGGKAING 348
            +  R+                               ++SW AL+SGY + G     +  
Sbjct: 91  TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
            +E    G+  D + LA ++  C    +L LG+Q+H  A+K G   DVR G+ALVD+Y K
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGK 210

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
              L+ A     G   + +  + A+++G ++             ++Q + G+E       
Sbjct: 211 CRSLEDALHFFHGMGERNSVSWGAVIAGCVQ-------------NEQYMRGLE------- 250

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            LL    +  CL   R LHA++IK  +++D +VG A++ +YAK  S+  A + F G+ + 
Sbjct: 251 -LLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNH 309

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
            + + NAM+      GLG  A+ LF+ M R G     +S+ GV  AC      +  +C+ 
Sbjct: 310 TVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVR 369

Query: 589 NEIEQIYG 596
           N I  +YG
Sbjct: 370 NAILDLYG 377


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 168/485 (34%), Positives = 276/485 (56%), Gaps = 3/485 (0%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P  + F++ I  C     +E GKQ+H LA+KFG+  E+ VG+ +  MY K G   +A ++
Sbjct: 39  PTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKV 98

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F+ +  ++ +SWTA+I GY + G   +A+  F + +D  +  D   L + +  C      
Sbjct: 99  FEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC 158

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAILSG 436
           + G  +H   +K G+ SD+ +G AL D+Y+K GD++SA  +    S C+    +  ++ G
Sbjct: 159 KFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDG 218

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           ++E   +  E  + +F + R  G+EP+  TFS L+   A+QA L +G  LHA  +K  + 
Sbjct: 219 YVE--TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFD 276

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            D  V + L+ MY KCG ++ A Q F  I D   ++WN+++S +  HGLGK A+ +FE M
Sbjct: 277 EDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERM 336

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
              G  P+ I+ + +L  C ++GL E G+  F  +++ YG+ P  EH++C++DLLGRAGR
Sbjct: 337 VDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGR 396

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L EA   IN  PF  +   W + +   ++  + +   LA+++L+ LEPK++G+ +L+SN+
Sbjct: 397 LKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNI 456

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA +   ++   VR  M D  + K  G SW+++  K H F A    HP    IY KLD L
Sbjct: 457 YANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTL 516

Query: 737 NDEMK 741
            D++K
Sbjct: 517 LDQIK 521



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 10/355 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G +++G+ +H   LK G  ++ F  +NL ++Y+K   +  A K+F+ M  +  ++WT++I
Sbjct: 55  GSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMI 114

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY   G++E  L     M   E   ++H     L AC  L+   FG  +H+  +K GFE
Sbjct: 115 DGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 174

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF-----MILEYNKAGESEMAFH 246
           +++FVG +L  MY  +G    A NVF G+   D  C N      +I  Y +  + E    
Sbjct: 175 SDIFVGNALTDMYSKAGDMESASNVF-GI---DSECRNVVSYTCLIDGYVETEQIEKGLS 230

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           VFV L     EPN++TF+++I  C     +E+G QLH   +K     +  V + +V MYG
Sbjct: 231 VFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYG 290

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G+ E+A + FD I +   I+W +L+S + + G G  AI  F   +D G+  ++    +
Sbjct: 291 KCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFIS 350

Query: 367 VIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           ++ GCS    +E GL   +     +G +      + ++D+  + G LK A+  ++
Sbjct: 351 LLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 405



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 202/432 (46%), Gaps = 11/432 (2%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R+ ++WT++I G   +  +   +   C M    E   +   S  + AC+ L     G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q+H  A+K G  + +FVG++L  MY   G   +A  VF  +  KD      MI  Y+K 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           GE E A   F  ++  +   + +   + +  C      + G+ +H   VK G   +I VG
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 299 NAIVTMYGKHGMSEEAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           NA+  MY K G  E A  +F   SE RN++S+T LI GYV +    K ++ F+E    GI
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +    +++I  C+  + LE G QLH   +K  +  D  + + LVD+Y K G L+ A  
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
             D         +N+++S F +      +D + +F +    G++P+ +TF  LL+   S 
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLG--KDAIKIFERMVDRGVKPNAITFISLLT-GCSH 357

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVG----NALITMYAKCGSIDGAFQIFKGIS-DRDIVS 532
           A LV     + YS+   Y   V+ G    + +I +  + G +  A +    +  + +   
Sbjct: 358 AGLVEEGLDYFYSMDKTYG--VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG 415

Query: 533 WNAMLSAYALHG 544
           W + L A  +HG
Sbjct: 416 WCSFLGACRIHG 427



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 188/369 (50%), Gaps = 8/369 (2%)

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + +RNL+SWTA+ISG  ++    +AI  F      G        ++ I  C+   ++E+G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q+H  A+K G  S++ +G+ L D+Y+K G +  A  + +   CK    + A++ G+  K
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY-SK 119

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
           I + EE ++               V  S L +  A +AC   GRS+H+  +K G+ +D+ 
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF-GRSVHSSVVKLGFESDIF 178

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
           VGNAL  MY+K G ++ A  +F   S+ R++VS+  ++  Y      +  L +F E++R+
Sbjct: 179 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 238

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI-YGLRPILEHFACMVDLLGRAGRLS 618
           G  P++ +   +++AC      E G  L  ++ +I +   P +   + +VD+ G+ G L 
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLE 296

Query: 619 EAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK-DAGSFILVSNMY 677
           +A+   +      + + W +LVSV       K +I   +R++D   K +A +FI +    
Sbjct: 297 QAIQAFDEIG-DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGC 355

Query: 678 AGQGMLDEA 686
           +  G+++E 
Sbjct: 356 SHAGLVEEG 364



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 6/283 (2%)

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A++SG  +     E   +  F   R+ G  P    FS  +   AS   +  G+ +H  
Sbjct: 9   WTAMISGLSQNSKFSE--AIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCL 66

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           ++K G  +++ VG+ L  MY+KCG++  A ++F+ +  +D VSW AM+  Y+  G  + A
Sbjct: 67  ALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEA 126

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           LL F++M  E    D   +   L AC      + G  + + + ++ G    +     + D
Sbjct: 127 LLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL-GFESDIFVGNALTD 185

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDA 667
           +  +AG +  A N+        + + +  L+   V         S+    R   +EP + 
Sbjct: 186 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 245

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            +F  +    A Q  L++  ++   +  +   ++   S I +D
Sbjct: 246 -TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVD 287


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 178/576 (30%), Positives = 315/576 (54%), Gaps = 14/576 (2%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
            + +H   +K+G   ++FV TSL+++Y   G  ++A N+F  +  K+V     +I  Y  
Sbjct: 97  AKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTL 156

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
             +  +A  VFV +L     P+DYT   ++S C  +  ++ GKQ+HG  +K+G     S+
Sbjct: 157 NSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSI 216

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR-SGHGGKAINGFLEFLDLG 356
           GN++  +Y K G  E   R F  I ++N+I+WT +IS       +    +N FL+ L   
Sbjct: 217 GNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGE 276

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  +   L +V+  C    ++ LG Q+ GF  K G  +++ +  + + +Y + G+ + A 
Sbjct: 277 VMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAM 336

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDV---------MVLFSQQRLAGMEPDPVTF 467
            L +         +NA++SGF + +   ++D+         + +F     + M+PD  TF
Sbjct: 337 RLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTF 396

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           S +LS+ ++   L +G  +HA +IKTG+ +DV+V +AL+ MY KCG I+ A + F  +  
Sbjct: 397 SSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPT 456

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
           R +V+W +M+S Y+ HG    A+ LFE+M   G  P++I+ + +L AC Y+GL E  +  
Sbjct: 457 RTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRY 516

Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           F+ ++  Y + P+++H+ CM+D+  R GRL +A   I    F  +  +W +LV+  +   
Sbjct: 517 FDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHG 576

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR--TTMNDLRLSKEAGCS 705
           N + +  A+ RLL+L+PK   +++L+ NMY   G   + A+VR  +   DL + ++   S
Sbjct: 577 NMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDR--S 634

Query: 706 WIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           WI I  K++ F A  + HP+S E+Y  L+ L ++ K
Sbjct: 635 WITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAK 670



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 163/327 (49%), Gaps = 18/327 (5%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  ++  C E   +   K LHG  VK G + +I V  ++V +Y + G S++A  +FD + 
Sbjct: 81  YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMP 140

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           E+N+++WTALI+GY  +     A+  F+E L LG       L  ++  C    N++LG Q
Sbjct: 141 EKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQ 200

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +HG+ IK+G  S   +G +L  +Y K G+L+S          K    +  ++S      A
Sbjct: 201 VHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISA----CA 256

Query: 443 DDE---EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
           +DE   E  + LF       + P+  T + ++SL  +   +  G+ +  +  K G A ++
Sbjct: 257 EDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNL 316

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA---------LHGLGKG-- 548
            V N+ + +Y + G  + A ++F+ + D  +++WNAM+S +A         LH   +G  
Sbjct: 317 PVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQ 376

Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC 575
           AL +F ++ R    PD  +   +L  C
Sbjct: 377 ALKIFRDLVRSAMKPDLFTFSSILSVC 403



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 161/326 (49%), Gaps = 12/326 (3%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           + S ++ LG+ VH + +K G+ + T   N+L  LY K   L+   + F  +  ++ ITWT
Sbjct: 190 VASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWT 249

Query: 129 SLIKGYLDDGDYESV-LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
           ++I    +D +Y  + L +  DM + E   NE T + ++  C    D   G+Q+  F  K
Sbjct: 250 TMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFK 309

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE----- 242
            G   N+ V  S + +Y   G   EA  +F  +    V   N MI  + +  +S      
Sbjct: 310 IGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLH 369

Query: 243 ------MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
                  A  +F  L+ S  +P+ +TF++++SVC   + +E+G+Q+H   +K G + ++ 
Sbjct: 370 ARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVV 429

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V +A+V MY K G  E A + F  +  R L++WT++ISGY + G    AI  F + +  G
Sbjct: 430 VNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAG 489

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQ 382
              +     +++  CS    +E  ++
Sbjct: 490 AKPNEITFVSLLSACSYAGLVEEAMR 515



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 20/318 (6%)

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
           +  L  G    S+    ++  C    +L     LHG  +K G + D+ + T+LV++Y + 
Sbjct: 67  MAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRC 126

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL--FSQQRLAGMEPDPVTF 467
           G+ + AR L D    K    + A+++G+      + + V+ L  F +    G  P   T 
Sbjct: 127 GNSQDARNLFDEMPEKNVVTWTALITGY----TLNSQPVLALEVFVEMLKLGRYPSDYTL 182

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
             +LS   +   +  G+ +H Y+IK G A+   +GN+L  +Y K G+++   + FK I D
Sbjct: 183 GGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPD 242

Query: 528 RDIVSWNAMLSAYAL-HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS-----GLS 581
           +++++W  M+SA A      +  L LF +M +    P++ ++  V+  C  S     G  
Sbjct: 243 KNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQ 302

Query: 582 EGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             G C         G    L      + L  R G   EAM L        S + W  ++S
Sbjct: 303 VQGFCF------KIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEME-DNSVITWNAMIS 355

Query: 642 -VSKLMANSKFSILASKR 658
             +++M ++K  + A  R
Sbjct: 356 GFAQIMDSAKDDLHARSR 373



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 6/198 (3%)

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
           D ++ M +  +    G       +  LL        L   ++LH + +KTG   D+ V  
Sbjct: 62  DAQEAMAMLKE----GQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVAT 117

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           +L+ +Y +CG+   A  +F  + ++++V+W A+++ Y L+     AL +F EM + G  P
Sbjct: 118 SLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYP 177

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
            D ++ G+L AC+ S   + G  +     + YG   I      +  L  ++G L   +  
Sbjct: 178 SDYTLGGMLSACVASHNIDLGKQVHGYTIK-YGAASITSIGNSLCRLYTKSGNLESGIRA 236

Query: 624 INSSPFSESPLLWRTLVS 641
               P  ++ + W T++S
Sbjct: 237 FKRIP-DKNVITWTTMIS 253


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 205/676 (30%), Positives = 346/676 (51%), Gaps = 30/676 (4%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           +N L+  YA+   L  A  LFD M  R A+T+ SLI        +   L    DM     
Sbjct: 97  SNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGH 156

Query: 156 KFNEHTCSVILEACS-LLEDRIFGEQIHAFAIKSGF--ENNVFVGTSLISMYFHSGCFRE 212
                T   +L ACS L ED   G + HAFA+K+GF   +  F   +L+SMY   G   +
Sbjct: 157 PLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDD 216

Query: 213 AENVFRGLAYKDVR-----CVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
           A+ +F  +   DV        N M+    ++G    A  V   +++    P+  TF + +
Sbjct: 217 AQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASAL 276

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAIS--ER 324
             C +   +  G+++H   +K   +   S V +A+V MY  H     A  +FD +   ER
Sbjct: 277 PACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGER 336

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
            L  W A+I GY ++G    A+  F     + G+    + +A V+  C+          +
Sbjct: 337 QLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAV 396

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK--I 441
           HG+ +K G   +  +  AL+D+YA+ GD+ +AR +      +    +N +++G + +  I
Sbjct: 397 HGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHI 456

Query: 442 ADDEEDVMVLFSQQR---------LAGMEPDPV-----TFSRLLSLSASQACLVRGRSLH 487
            D  + V  +  Q R         +AG + +PV     T   LL   A  A   RG+ +H
Sbjct: 457 RDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIH 516

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            Y+++    +DV VG+AL+ MYAKCG +  +  +F  +  R++++WN ++ AY +HGLG 
Sbjct: 517 GYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGD 576

Query: 548 GALLLFEEMKREGFA-PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
            A+ LF+ M     A P++++ +  L AC +SG+ + G+ +F  +++ +G+ P  +  AC
Sbjct: 577 EAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHAC 636

Query: 607 MVDLLGRAGRLSEAMNLINS-SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
            VD+LGRAGRL EA  +I+S  P  +    W + +   +L  N     +A++RL +LEP 
Sbjct: 637 AVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPD 696

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           +A  ++L+ N+Y+  G+ +++++VR+ M    +SKE GCSWIE+D  +H F+A    HPE
Sbjct: 697 EASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPE 756

Query: 726 SEEIYSKLDLLNDEMK 741
           S  +++ +D L + M+
Sbjct: 757 STLVHAHMDALWERMR 772


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 213/680 (31%), Positives = 364/680 (53%), Gaps = 27/680 (3%)

Query: 70  GSGDLKLGQAVHAFLLKSG---SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
            +  L   + +H   + SG   S N     ++L   YA    + +A+KLFD +   S   
Sbjct: 91  ATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFL 150

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFA 185
           W ++IK Y+D G +   L +   M  S + + +++T  ++++ACS++     G  IH  A
Sbjct: 151 WNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRA 210

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           + SGF +N+FV  SL++MY + G    A  VF  +  + V   N MI  + + G  E A 
Sbjct: 211 LVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEAL 270

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            VF  ++ +  EP+  T  + +  C     +E G ++H L  K  +  +I V NA+V MY
Sbjct: 271 AVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMY 330

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCL 364
            + G  +EA  +F    E+++I+WT++I+GY+ +G+   A+      + L G+  ++  L
Sbjct: 331 SRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSAL-ALCPAMQLDGVVPNAVTL 389

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           A+++  C+    L+ G  LH + ++    SDV + TAL+D+YAK   +  +  +    S 
Sbjct: 390 ASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSM 449

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K T  +NA+LSG +    +   + + LF    +  +E +  TF+ ++   A  A L +  
Sbjct: 450 KRTVPWNALLSGLIHN--ELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVM 507

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI--SDRDIVSWNAMLSAYAL 542
           +LH+Y +++G+ + + V   LI MY+KCGS+D A +IF  I   ++DI+ W+ +++ Y +
Sbjct: 508 NLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGM 567

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG G+ A+LLF +M   G  P++I+   VL AC + GL + G+ LF  + + Y   P+  
Sbjct: 568 HGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPN 627

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ C+VDLLGRAGRL EA +LI S PF ++  +W  L+    +  N +   +A++RL +L
Sbjct: 628 HYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFEL 687

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EP+  G++IL++N+YA  G   +A       + L+LS        EI++    FV     
Sbjct: 688 EPESTGNYILLANIYAAVGRWKDAEN-----HKLQLSPPPK----EINT----FVTDLNM 734

Query: 723 HPESEEIYSKLDLLNDEMKL 742
           HP    I +K   L  E++L
Sbjct: 735 HP----ILTKCRALKSELEL 750



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 236/488 (48%), Gaps = 8/488 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K       L +G  +H   L SG  ++ F  N+L+ +Y    ++ +A+++F+ ML
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            RS ++W ++I G+  +G  E  L +   M  +  + +  T    L +C  L++   G +
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIK 306

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H    K+  +  + V  +L+ MY   G   EA  VF     KDV     MI  Y   G 
Sbjct: 307 VHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGN 366

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           ++ A  +   +      PN  T  +++S C     +++GK LH   ++  +  ++ V  A
Sbjct: 367 AKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTA 426

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K      + ++F   S +  + W AL+SG + +    +A+  F   L   +  +
Sbjct: 427 LIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEAN 486

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            +   +VI   ++ ++L+  + LH + ++ G++S + + T L+D+Y+K G L  A  + D
Sbjct: 487 HATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFD 546

Query: 421 GFSCKY--TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               K      ++ +++G+   +    E  ++LF+Q   +GM+P+ +TF+ +L   + + 
Sbjct: 547 EIPNKEKDIIVWSVLIAGY--GMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRG 604

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNA 535
            +  G +L  Y I+  Y +  +  +   ++ +  + G +D A+ + K +   ++   W A
Sbjct: 605 LVDDGLTLFKYMIEN-YPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGA 663

Query: 536 MLSAYALH 543
           +L A  +H
Sbjct: 664 LLGACLIH 671


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 200/661 (30%), Positives = 343/661 (51%), Gaps = 4/661 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G    A + KSG  ++    + LI+ Y+K      A ++F+ M     ++WT ++  +++
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G +   L +   M ++    NE T   +L A S L    +G+ +HA  +    E N+ +
Sbjct: 195 AGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLN-YGKLVHAHLMMWRIELNLVL 253

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
            T+L+ MY       +A  V +     DV     +I  + ++ +   A   F  + +S  
Sbjct: 254 KTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGV 313

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-HGMSEEAE 315
            PN++T++ +++ C   L ++ GKQ+H   V  G+  ++SVGN++V MY K   M E+A 
Sbjct: 314 VPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAV 373

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           R F  I+  N+ISWT+LI+G+   G   ++I  F     +G+  +S  L+T++  C    
Sbjct: 374 RAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIK 433

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +L    +LHG+ IK+   +DV +G ALVD YA  G +  A  +      +    + ++ +
Sbjct: 434 SLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLAT 493

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
              +    + E  + + +      +  D  + +  LS +A    +  G+ LH YS+K+G 
Sbjct: 494 RINQ--TGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGL 551

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            + + V N L+ +Y KCG I  A + F  I++ D VSWN ++   A +G    AL  FE+
Sbjct: 552 GSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFED 611

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           M+  G  PD I+ L VL AC + GL + G+  F  + + +G+RP L+H+ C+VDLLGRAG
Sbjct: 612 MRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAG 671

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           RL EAMN+I + PF    L+++TL+   KL  N       +++ L+L+P D   ++L++N
Sbjct: 672 RLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLAN 731

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +Y   G  +   K R  M +  + K  G SW+E  + +H F A    HP+  +I+ K++ 
Sbjct: 732 LYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIES 791

Query: 736 L 736
           L
Sbjct: 792 L 792



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 175/625 (28%), Positives = 302/625 (48%), Gaps = 25/625 (4%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  ++ G  +H+ ++K G Q D F +NNL++LY K   +  A++LFD M  R   +WT L
Sbjct: 28  SRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTML 87

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           +  Y   G++E  L +   M  S E  NE T S  L +CS L +   G +  A   KSGF
Sbjct: 88  MSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGF 147

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           ++N  +G++LI  Y   GC +EA  VF  +   D+     M+  + +AG    A  ++  
Sbjct: 148 DSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHR 207

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++ +   PN++TF  +++     LG+  GK +H   + + +   + +  A+V MY K   
Sbjct: 208 MIQTGVAPNEFTFVKLLAAS-SFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQS 266

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E+A ++     E ++  WTA+ISG+ +S    +AI  F E    G+  ++   + +++ 
Sbjct: 267 IEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNA 326

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL-KSARMLLDGFSCKYTAE 429
           CS    L+LG Q+H   +  G  +DV +G +LVD+Y K  ++ + A     G +      
Sbjct: 327 CSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVIS 386

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + ++++GF E     EE+ + +F   +  G+ P+  T S +L    +   L + R LH Y
Sbjct: 387 WTSLIAGFSEH--GLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGY 444

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            IK     DV+VGNAL+  YA  G +D A+ +   +  RD++++ ++ +     G  + A
Sbjct: 445 IIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMA 504

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPILEH 603
           L +   M ++    D  S+   L A         GI +    +Q++      GL   +  
Sbjct: 505 LNIITHMNKDDVRMDGFSLASFLSAA-------AGIPIMETGKQLHCYSVKSGLGSWISV 557

Query: 604 FACMVDLLGRAGRLSEAMN--LINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRL 659
              +VDL G+ G + +A    L  + P + S   W  L+    S    +S  S     RL
Sbjct: 558 SNGLVDLYGKCGCIHDAHRSFLEITEPDAVS---WNGLIFGLASNGHVSSALSAFEDMRL 614

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLD 684
             +EP D  + +LV    +  G++D
Sbjct: 615 AGVEP-DQITCLLVLYACSHGGLVD 638



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 157/311 (50%), Gaps = 4/311 (1%)

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           +++S C  +  V +G  +H   +K G   ++ + N ++++YGK     EA ++FD +  R
Sbjct: 21  DIVSFC-NSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCR 79

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           ++ SWT L+S Y + G+  +A+  F   L  G   +   L+T +  CS       G +  
Sbjct: 80  DVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQ 139

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
               K G+ S+  LG+AL+D Y+K G  + A  + +  +      +  ++S F+E  A  
Sbjct: 140 ALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE--AGS 197

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
               + L+ +    G+ P+  TF +LL+ S+    L  G+ +HA+ +      ++++  A
Sbjct: 198 WSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTA 256

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           L+ MY KC SI+ A ++ K   + D+  W A++S +      + A+  F EM+  G  P+
Sbjct: 257 LVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPN 316

Query: 565 DISILGVLQAC 575
           + +  G+L AC
Sbjct: 317 NFTYSGILNAC 327


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 182/584 (31%), Positives = 320/584 (54%), Gaps = 14/584 (2%)

Query: 165 ILEACSLLEDRIF-GEQI-HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           +L+ C  L+ R + G QI H   +K+G  +N FV + L+++Y   G   +A  VF  +  
Sbjct: 70  LLQQC--LDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPR 127

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           ++V     +++ + +  + + A HVF  +L +   P+ YT + V+  C     ++ G Q 
Sbjct: 128 RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQF 187

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H   +K+ +  + SVG+A+ ++Y K G  E+A + F  I E+N+ISWT+ +S    +G  
Sbjct: 188 HAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAP 247

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            K +  F+E +   I  +   L + +  C    +LELG Q+    IK GY S++R+  +L
Sbjct: 248 VKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSL 307

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG---FMEKIADD------EEDVMVLFS 453
           + +Y K G +  A    +         +NA+++G    ME   D+        + + +FS
Sbjct: 308 LYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFS 367

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           +   +GM+PD  T S +LS+ +    + +G  +HA +IKTG+ +DVIV  +LI+MY KCG
Sbjct: 368 KLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCG 427

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           SI+ A + F  +S R +++W +M++ ++ HG+ + AL +FE+M   G  P+ ++ +GVL 
Sbjct: 428 SIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLS 487

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC ++G+    +  F  +++ Y ++P+++H+ CMVD+  R GRL +A+N I    +  S 
Sbjct: 488 ACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSE 547

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
            +W   ++  +   N +    AS++LL L+PKD  +++L+ NMY      D+ ++VR  M
Sbjct: 548 FIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMM 607

Query: 694 NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLL 736
              ++ K    SWI I  K++ F  + K HP S  I   L DLL
Sbjct: 608 EVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLL 651



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 246/482 (51%), Gaps = 19/482 (3%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           Q VH  ++K+G  ++ F  + L+N+YAK   ++ A+++F+ M  R+ + WT+L+ G++ +
Sbjct: 84  QIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQN 143

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
              +  + +  +M  +    + +T S +L ACS L+    G+Q HA+ IK   + +  VG
Sbjct: 144 SQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVG 203

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           ++L S+Y   G   +A   F  +  K+V      +      G       +FV ++S D +
Sbjct: 204 SALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIK 263

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           PN++T T+ +S C E   +E G Q+  L +KFG    + V N+++ +Y K G   EA R 
Sbjct: 264 PNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRF 323

Query: 318 FDAISERNLISWTALISGYVR-----------SGHGGKAINGFLEFLDLGICCDSSCLAT 366
           F+ + + ++++W A+I+G+ +              G +A+  F +    G+  D   L++
Sbjct: 324 FNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSS 383

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+  CS    +E G Q+H   IK G+LSDV + T+L+ +Y K G ++ A       S + 
Sbjct: 384 VLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRT 443

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              + ++++GF +      +  + +F    LAG+ P+ VTF  +LS + S A +V  ++L
Sbjct: 444 MIAWTSMITGFSQH--GMSQQALHIFEDMSLAGVRPNTVTFVGVLS-ACSHAGMV-SQAL 499

Query: 487 HAYSI-KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
           + + I +  Y    ++ +   ++ M+ + G ++ A    K ++ +     W+  ++    
Sbjct: 500 NYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRS 559

Query: 543 HG 544
           HG
Sbjct: 560 HG 561



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 200/418 (47%), Gaps = 26/418 (6%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LKLG   HA+++K     DT   + L +LY+K  RL+ A K F  +  ++ I+WTS +  
Sbjct: 181 LKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSA 240

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
             D+G     L +  +M   + K NE T +  L  C  +     G Q+ +  IK G+E+N
Sbjct: 241 CGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESN 300

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM---------- 243
           + V  SL+ +Y  SG   EA   F  +    +   N MI     AG ++M          
Sbjct: 301 LRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMI-----AGHAQMMELTKDNLSA 355

Query: 244 ------AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
                 A  +F  L  S  +P+ +T ++V+SVC   L +E+G+Q+H   +K G + ++ V
Sbjct: 356 CQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIV 415

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             ++++MY K G  E A + F  +S R +I+WT++I+G+ + G   +A++ F +    G+
Sbjct: 416 STSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGV 475

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSAR 416
             ++     V+  CS    +   L       K   +  V      +VD++ + G L+ A 
Sbjct: 476 RPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQAL 535

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP-DPVTFSRLLSL 473
             +   + +  +EF  I S F+          +  ++ ++L  ++P DP T+  LL++
Sbjct: 536 NFIKKMNYE-PSEF--IWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNM 590



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 165/354 (46%), Gaps = 34/354 (9%)

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
           NK G  E     +V LL    +   Y+ T ++               HG  +K G     
Sbjct: 55  NKEGTEEEEKLFYVPLLQQCLDKRSYSGTQIV---------------HGHVMKTGCHDNF 99

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V + +V +Y K G  E+A R+F+ +  RN+++WT L+ G+V++     AI+ F E L  
Sbjct: 100 FVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYA 159

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G       L+ V+  CS   +L+LG Q H + IK+    D  +G+AL  +Y+K G L+ A
Sbjct: 160 GSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDA 219

Query: 416 RMLLDGFSCKYTAEFNAI-LSGFMEKIADDEEDV--MVLFSQQRLAGMEPDPVTFSRLLS 472
              L  FS     E N I  +  +    D+   V  + LF +     ++P+  T +  LS
Sbjct: 220 ---LKAFS--RIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALS 274

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
                  L  G  + +  IK GY +++ V N+L+ +Y K G I  A + F  + D  +V+
Sbjct: 275 QCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVT 334

Query: 533 WNAMLSAYA---------LHGLGKG--ALLLFEEMKREGFAPDDISILGVLQAC 575
           WNAM++ +A         L    +G  AL +F ++ + G  PD  ++  VL  C
Sbjct: 335 WNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVC 388


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 187/619 (30%), Positives = 325/619 (52%), Gaps = 38/619 (6%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI--SMYFHSGCFREAE 214
             EH    +L  C  +  R F +QIHA  IK+G  N +F  + LI  S    SG    A 
Sbjct: 27  LQEHPSLKLLSKCQSI--RTF-KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAI 83

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
           ++F  +   ++   N MI   + +    +A   FV ++ S  EPN YTF  ++  C +  
Sbjct: 84  SLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLA 143

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG------------------------- 309
              EGKQ+H   +K G V ++ +  +++ MY + G                         
Sbjct: 144 SAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIA 203

Query: 310 ------MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
                   + A ++FD +  ++++SW A+I+GY + G   +A+  F +     +  + S 
Sbjct: 204 GYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNEST 263

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           + +V+  C+  + L+LG  +  +    G  S+++L  AL+D+Y+K GDL++AR L D   
Sbjct: 264 IVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDML 323

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    +N ++ G+    +  E   + LF +   +G+EP  +TF  +L   A    +  G
Sbjct: 324 ERDVISWNVMIGGYTHMCSYKE--ALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG 381

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + +HAY  K   +    +  +LI +YAKCG+I  A Q+F G+  + + SWNAM+   A+H
Sbjct: 382 KWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMH 441

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G    A  LF +M  +G  P++I+ +G+L AC ++GL + G   F+ + Q Y + P  +H
Sbjct: 442 GQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQH 501

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           + CM+DLLGRAG   EA +L+ +        +W +L+   +     +   L ++RL +LE
Sbjct: 502 YGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELE 561

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P + G+++L+SN+YAG G  D+ A++RT +ND  + K  GC+ IE+D+ +H F+   K H
Sbjct: 562 PDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVH 621

Query: 724 PESEEIYSKLDLLNDEMKL 742
           P+SE+IY  L+ +++++K+
Sbjct: 622 PQSEDIYRMLEEVDEQLKV 640



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 204/433 (47%), Gaps = 37/433 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV--AQKLFDGMLVRSAITWTSLI 131
           ++  + +HA ++K+G  N  F  + LI   A     D+  A  LF+ +   +   W S+I
Sbjct: 42  IRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMI 101

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           +G          L     M  S  + N +T   +L++C+ L     G+QIHA  +K GF 
Sbjct: 102 RGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFV 161

Query: 192 NNVFVGTSLISMYFHSG------------CFREA-------------------ENVFRGL 220
           ++VF+ TSLI+MY  SG             FR+A                     +F  +
Sbjct: 162 SDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEM 221

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             KDV   N MI  Y + G S+ A  +F  +  ++  PN+ T  +V+S C ++  ++ G 
Sbjct: 222 PVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGN 281

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +       G+   + + NA++ MY K G  + A  +FD + ER++ISW  +I GY    
Sbjct: 282 SMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMC 341

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +A+  F E L  G+        +++  C+    ++LG  +H +  K+       L T
Sbjct: 342 SYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLST 401

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAG 459
           +L+D+YAK G++ +AR + DG   K  A +NA++ G  M   AD       LFS+    G
Sbjct: 402 SLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQAD---KAFELFSKMSSDG 458

Query: 460 MEPDPVTFSRLLS 472
           +EP+ +TF  +LS
Sbjct: 459 IEPNEITFVGILS 471



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 180/435 (41%), Gaps = 35/435 (8%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K          G+ +HA +LK G  +D F   +LIN+YA+   ++ AQ +FD   
Sbjct: 132 FPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSN 191

Query: 121 VRSAITWTSLIKGYL------------------DDGDYESVLGIACDMYRSEEKF----- 157
            R AI++T+LI GY                   D   + +++     M RS+E       
Sbjct: 192 FRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFED 251

Query: 158 --------NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
                   NE T   +L AC+       G  + ++    G  +N+ +  +LI MY   G 
Sbjct: 252 MRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGD 311

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
            + A  +F  +  +DV   N MI  Y      + A  +F  +L+S  EP + TF +++  
Sbjct: 312 LQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPS 371

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C     ++ GK +H    K       S+  +++ +Y K G    A ++FD +  ++L SW
Sbjct: 372 CAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASW 431

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            A+I G    G   KA   F +    GI  +      ++  C     ++LG Q     ++
Sbjct: 432 NAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQ 491

Query: 390 HGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
              +S   +    ++D+  + G  + A  LL     K      AI    +    D     
Sbjct: 492 DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDG---AIWGSLLGACRDHGRVE 548

Query: 449 MVLFSQQRLAGMEPD 463
           +     +RL  +EPD
Sbjct: 549 LGELVAERLFELEPD 563


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 214/719 (29%), Positives = 373/719 (51%), Gaps = 49/719 (6%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K + G  DL LG+ +HA + K G    T   N+L+N+Y K   +D A+++FD + 
Sbjct: 88  FPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEIT 147

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS-LLEDRIFGE 179
            R  ++W S+I       ++E  + +   M          T   +  ACS L+   + G+
Sbjct: 148 NRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGK 207

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           Q+HAF +++G +   F   +L++MY   G   EA+ +F     KD+   N +I   ++  
Sbjct: 208 QVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQND 266

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREIS- 296
             E A      +L S   PN  T  +V+  C   E LG   GK++H   +    + E S 
Sbjct: 267 RFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC--GKEIHAFVLMNNDLIENSF 324

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-DL 355
           VG A+V MY      E+   +FD +  R +  W A+I+GYVR+    +AI  F+E + +L
Sbjct: 325 VGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFEL 384

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  +S  L++V+  C  C +      +H   +K G+  D  +  AL+D+Y++ G ++ A
Sbjct: 385 GLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIA 444

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM-VLFSQQRLAG--------------- 459
           R +    + K    +N +++G++  +    +D + +L   QR                  
Sbjct: 445 RSIFGSMNRKDIVSWNTMITGYV--VCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKN 502

Query: 460 --MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
             ++P+ VT   +L   A+ A L +G+ +HAY++K   + DV VG+AL+ MYAKCG ++ 
Sbjct: 503 FPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNL 562

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-----FAPDDISILGVL 572
           +  +F+ +S R++++WN ++ AY +HG G+ AL LF  M  EG       P++++ + + 
Sbjct: 563 SRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIF 622

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            +  +SG+ + G+ LF  ++  +G+ P  +H+AC+VDLLGR+G++ EA NLI + P +  
Sbjct: 623 ASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMK 682

Query: 633 PL-LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
            +  W +L+   K+  N +   +A+K L  L+P        V +    Q ML        
Sbjct: 683 KVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPN-------VLDYGTKQSMLGR------ 729

Query: 692 TMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSS 748
            M +  + KE GCSWIE   ++H F+A    HP+S+E++  L+ L+  MK +  V D+S
Sbjct: 730 KMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTS 788



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 199/415 (47%), Gaps = 24/415 (5%)

Query: 240 ESEMAFH----VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
           +S   FH     + +++++   P+++ F  V+        +  GKQLH    KFG     
Sbjct: 61  QSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPT 120

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           +V N++V MYGK G  + A R+FD I+ R+ +SW ++I+   R      A++ F   L  
Sbjct: 121 AVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLE 180

Query: 356 GICCDSSCLATVIDGCS-VCSNLELGLQLHGFAIKHGYLSDVRLGT--ALVDIYAKGGDL 412
            +   S  L +V   CS + + L LG Q+H F +++G   D R  T  ALV +YAK G +
Sbjct: 181 NVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG---DWRTFTNNALVTMYAKLGRV 237

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             A+ L D F  K    +N I+S   +   D  E+ ++       +G+ P+ VT + +L 
Sbjct: 238 YEAKTLFDVFDDKDLVSWNTIISSLSQN--DRFEEALLYLHVMLQSGVRPNGVTLASVLP 295

Query: 473 LSASQACLVRGRSLHAYSI-KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
             +    L  G+ +HA+ +       +  VG AL+ MY  C   +    +F G+  R I 
Sbjct: 296 ACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIA 355

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKRE-GFAPDDISILGVLQACIY--SGLSEGGI--C 586
            WNAM++ Y  +     A+ LF EM  E G +P+ +++  VL AC+   S L + GI  C
Sbjct: 356 VWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSC 415

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +       +G          ++D+  R GR+  A ++  S    +  + W T+++
Sbjct: 416 VVK-----WGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN-RKDIVSWNTMIT 464



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 10/203 (4%)

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           ++    AG+ PD   F  +L  +A    L  G+ LHA+  K G A    V N+L+ MY K
Sbjct: 73  YTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGK 132

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           CG ID A ++F  I++RD VSWN+M++A       + A+ LF  M  E   P   +++ V
Sbjct: 133 CGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSV 192

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA--CMVDLLGRAGRLSEAMNLINSSPF 629
             AC  S L   G+ L  ++            F    +V +  + GR+ EA  L +   F
Sbjct: 193 AHAC--SNLI-NGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDV--F 247

Query: 630 SESPLL-WRTLVSVSKLMANSKF 651
            +  L+ W T+  +S L  N +F
Sbjct: 248 DDKDLVSWNTI--ISSLSQNDRF 268


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 198/674 (29%), Positives = 362/674 (53%), Gaps = 16/674 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+  + +H  +  + S N  F  N ++  Y K   +  A+  FD +  ++  +W S++ 
Sbjct: 39  DLESVRQIHDRISGAASAN-VFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLT 97

Query: 133 GYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGEQIHA-FAIKSGF 190
            Y  +G Y + L    D+Y R + + N    + +L AC+ +E    G+ IH+  +   G 
Sbjct: 98  AYAQNGHYRAAL----DLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGL 153

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFHVFV 249
           + +V +  SL++MY   G   +A+ +F  ++  + V   N MI  Y ++G  E A  ++ 
Sbjct: 154 KLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYE 213

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
            +   D EP+  TFT+V+S C  NLG+ ++G+++H L    G   ++S+ NA++TMY + 
Sbjct: 214 DM---DVEPSVRTFTSVLSAC-SNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARC 269

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              ++A ++F  +  R+++SW+A+I+ +  +    +AI  + +    G+  +    A+V+
Sbjct: 270 KCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVL 329

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+   +L  G  +H   + +GY   +  GTALVD+Y   G L  AR L D    +   
Sbjct: 330 LACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEG 389

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP-DPVTFSRLLSLSASQACLVRGRSLH 487
            +  ++ G+ ++       V+ L+ + +     P   + +S ++S  AS       R  H
Sbjct: 390 LWTVLIGGYSKQ--GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAH 447

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           +     G  +D ++  +L+ MY++ G+++ A Q+F  +S RD ++W  +++ YA HG   
Sbjct: 448 SDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHG 507

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL L++EM+ EG  P +++ + VL AC ++GL E G  LF  I+  Y + P + H++C+
Sbjct: 508 LALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCI 567

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           +DLL RAGRLS+A  LIN+ P   + + W +L+  S++  + K +  A+ ++  L+P D 
Sbjct: 568 IDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDP 627

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
            S++L+SN++A  G L   A VR TM    + K  G SWIE+  ++H F      HP  +
Sbjct: 628 ASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQ 687

Query: 728 EIYSKLDLLNDEMK 741
           EI+++L  L+ ++K
Sbjct: 688 EIFAELQRLSPKIK 701



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 164/354 (46%), Gaps = 4/354 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L  G+ +HA +   G++ D    N L+ +YA+   LD A K+F  +  R  ++W+++I
Sbjct: 235 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMI 294

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             + +   ++  +     M     + N +T + +L AC+ + D   G  +H   + +G++
Sbjct: 295 AAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYK 354

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             +  GT+L+ +Y   G   EA ++F  +  +D      +I  Y+K G       ++  +
Sbjct: 355 ITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREM 414

Query: 252 LSSDFEP-NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
            ++   P     ++ VIS C       + +Q H      G++ +  +  ++V MY + G 
Sbjct: 415 KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGN 474

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A ++FD +S R+ ++WT LI+GY + G  G A+  + E    G          V+  
Sbjct: 475 LESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYA 534

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLLDGF 422
           CS     E G QL   +I+  Y     +   + ++D+ ++ G L  A  L++  
Sbjct: 535 CSHAGLQEQGKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAM 587


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 197/646 (30%), Positives = 330/646 (51%), Gaps = 67/646 (10%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           S +L  C+         ++HA  IKS F +  F+   LI +Y   GC   A  +F  +  
Sbjct: 23  SKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLE 82

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD--------------------------- 255
           +++   N +I  + K+G  + A H+F  +   D                           
Sbjct: 83  RNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQM 142

Query: 256 ----FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
               F  N+Y+F + +S C     ++ G Q+H L  +   + ++ +G+A+V MY K G  
Sbjct: 143 HGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRV 202

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E A+ +FD ++ R+ +SW +LI+ Y ++G   +A+  F+E +  G+  D   LA+V+  C
Sbjct: 203 EYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSAC 262

Query: 372 SVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           +  S ++ G Q+H   +K   + +D+ LG AL+D+YAK   +  AR++ D    +     
Sbjct: 263 ATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSE 322

Query: 431 NAILSGFME----KIAD-------------------------DEEDVMVLFSQQRLAGME 461
            +++SG+ +    K+A                          + E+ ++LF   +   + 
Sbjct: 323 TSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVW 382

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA------ADVIVGNALITMYAKCGSI 515
           P   TF  LL+  A+ A L  GR  H++ +K G+       +DV VGN+LI MY KCGS+
Sbjct: 383 PTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSV 442

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +   ++F+ + ++D VSWNAM+  YA +G G  AL +F +M   G APD ++++GVL AC
Sbjct: 443 ENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCAC 502

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            ++GL + G   F  +   +GL P+ +H+ CMVDLLGRAG L EA NLI         ++
Sbjct: 503 SHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIV 562

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W +L++  K+  N +      K+LL+++P+++G ++L+SNMYA         +VR  M  
Sbjct: 563 WGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQ 622

Query: 696 LRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             + K+ GCSWIEI  +L+ F+   K H   +EIY  L  +  +MK
Sbjct: 623 RGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMK 668



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 246/535 (45%), Gaps = 73/535 (13%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI-----KGY 134
           VHA ++KS   ++TF  N LI++Y K   +DVA+KLFD ML R+  +W S+I      G+
Sbjct: 41  VHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGF 100

Query: 135 LDD--------------------------GDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           LDD                          G ++  L     M+      NE++    L A
Sbjct: 101 LDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSA 160

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C+ L+D   G QIH+   +S + ++V++G++L+ MY   G    A++VF  +  +     
Sbjct: 161 CAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSW 220

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N +I  Y + G  + A  +FV ++    EP++ T  +V+S C     ++EG+Q+H   VK
Sbjct: 221 NSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVK 280

Query: 289 FGVVR-EISVGNAIVTMYGKHGMSEEAERMFD------AISE------------------ 323
               R ++ +GNA++ MY K     EA  +FD       +SE                  
Sbjct: 281 CDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARY 340

Query: 324 -------RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
                  +++I+W ALI+G  ++G   +A+  F       +         +++ C+  ++
Sbjct: 341 MFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLAD 400

Query: 377 LELGLQLHGFAIKHGYL------SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           L+LG Q H   +KHG+       SDV +G +L+D+Y K G +++   +      K    +
Sbjct: 401 LQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSW 460

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR-SLHAY 489
           NA++ G+ +    ++   + +F +   +G  PD VT   +L   +    L  GR    + 
Sbjct: 461 NAMIVGYAQNGFGNK--ALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSM 518

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           + + G          ++ +  + G ++ A  + + +S   D + W ++L+A  +H
Sbjct: 519 TAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVH 573



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 141/557 (25%), Positives = 236/557 (42%), Gaps = 108/557 (19%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G  DLKLG  +H+ + +S   +D +  + L+++Y+K  R++ AQ +FD M VRS ++W S
Sbjct: 163 GLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNS 222

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI  Y  +G  +  L I  +M +   + +E T + ++ AC+ +     G+QIHA  +K  
Sbjct: 223 LITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCD 282

Query: 190 -FENNVFVGTSLISMYFHSGCFREAENV-------------------------------F 217
            F N++ +G +L+ MY       EA  +                               F
Sbjct: 283 EFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMF 342

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +  KDV   N +I    + GE+E A  +F  L      P  YTF N+++ C     ++
Sbjct: 343 SNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQ 402

Query: 278 EGKQL------HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
            G+Q       HG   ++G   ++ VGN+++ MY K G  E   R+F  + E++ +SW A
Sbjct: 403 LGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNA 462

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG-LQLHGFAIKH 390
           +I GY ++G G KA+  F + L+ G   D   +  V+  CS    L+ G         +H
Sbjct: 463 MIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQH 522

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G +      T +VD+  + G L+ A+ L++  S                           
Sbjct: 523 GLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMS--------------------------- 555

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSLHAYSIKTGYAAD-------VIVG 502
                    M+PD + +  LL+     AC V R   L  Y +K     D       V++ 
Sbjct: 556 ---------MQPDAIVWGSLLA-----ACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLS 601

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIV-----SW-------NAMLSAYALHGLGKGAL 550
           N    MYA+        ++ K +  R +V     SW       N  +     H   K   
Sbjct: 602 N----MYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIY 657

Query: 551 L----LFEEMKREGFAP 563
           +    + ++MK+ G+ P
Sbjct: 658 MVLRTILQQMKQAGYVP 674



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 180/363 (49%), Gaps = 38/363 (10%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           F+ +++ C  +    +  ++H   +K     E  + N ++ +YGK G  + A ++FD + 
Sbjct: 22  FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA----------------- 365
           ERN+ SW ++I  + +SG    A++ F +   +  C  +S ++                 
Sbjct: 82  ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141

Query: 366 --------------TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
                         + +  C+   +L+LG Q+H    +  YLSDV +G+ALVD+Y+K G 
Sbjct: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           ++ A+ + D  + +    +N++++ + +    DE   + +F +    G+EPD VT + ++
Sbjct: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDE--ALKIFVEMIKCGVEPDEVTLASVV 259

Query: 472 SLSASQACLVRGRSLHAYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           S  A+ + +  G+ +HA  +K   +  D+I+GNAL+ MYAKC  I+ A  IF  +  R +
Sbjct: 260 SACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSV 319

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           VS  +M+S YA     K A  +F  M       D I+   ++  C  +G +E  + LF  
Sbjct: 320 VSETSMVSGYAKASKVKVARYMFSNM----MVKDVITWNALIAGCTQNGENEEALILFRL 375

Query: 591 IEQ 593
           +++
Sbjct: 376 LKR 378



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 55/96 (57%)

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D   FS+LL+  A          +HA  IK+ +A++  + N LI +Y KCG +D A ++F
Sbjct: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
             + +R+I SWN+++ A+   G    A+ +FE+M +
Sbjct: 78  DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQ 113


>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 201/674 (29%), Positives = 351/674 (52%), Gaps = 7/674 (1%)

Query: 78  QAVHA-FLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           Q +HA F+L    QN T  ++ LI+ YA    L+ + ++F  ++  +   + ++++    
Sbjct: 44  QQIHARFILHGFHQNPTL-SSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTR 102

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G+ E  L +   M       +E T   +L +CS   +  FG  IH + +K GF+    V
Sbjct: 103 YGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVV 162

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
            T+L  MY     F  A  +F   + KD+   + +  E  +    E  F VF  +++   
Sbjct: 163 ATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQL 222

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ +TF N++        ++  K +H +A+   +  ++ V  A++++Y K     +A +
Sbjct: 223 VPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARK 282

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD + E++ + W  +I+ Y R G   + +  F      GI  D      VI   +    
Sbjct: 283 LFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKC 342

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           ++ G Q H   +++G  S V +  +L+D+Y +   L SA  + +  + K    ++A++ G
Sbjct: 343 VDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKG 402

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           +++         + LFS+ +  G++ D V    +L        L   + LH YS+K G  
Sbjct: 403 YVKN--GQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLT 460

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFK--GISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           +   +  AL+  YAKCGSI+ A ++F+   I D+D++ WN+M+SA+A HG       L+ 
Sbjct: 461 SLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYN 520

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
            MK     PD ++ LG+L AC+ SGL E G   F E+ + YG +P  EH+ACMV+LLGRA
Sbjct: 521 RMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRA 580

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G +SEA  L+ + P      +W  L+S  K+   SK +  A+++L+++EP++AG++IL+S
Sbjct: 581 GLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLS 640

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           N+YA  G  D  AK+R+ + +  L K  GCSW+EI+  +  F  + + HP + +IY+ L 
Sbjct: 641 NIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILG 700

Query: 735 LLNDEMKLKVKDSS 748
            L  E+K +V++ S
Sbjct: 701 NLELEIK-EVREKS 713



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/540 (23%), Positives = 238/540 (44%), Gaps = 19/540 (3%)

Query: 34  PNPKSQVAYLCSISSVSCSERTLLF-------------NDWPQLVKISIGSGDLKLGQAV 80
           PN     A L +++    SERTLL                +P +++      ++  G+ +
Sbjct: 88  PNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTI 147

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H +L+K G       A  L  +Y +    + A +LFD   V+     +SL      + + 
Sbjct: 148 HGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNG 207

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
           E +  +   M   +   +  T   +L   + L      + +H  AI S    ++ V T++
Sbjct: 208 EGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAV 267

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           +S+Y       +A  +F  +  KD    N MI  Y + G+      +F  +  S    + 
Sbjct: 268 LSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDL 327

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           +T   VIS   +   V+ GKQ H   ++ G   ++SV N+++ MY +  + + A ++F+ 
Sbjct: 328 FTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNW 387

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           ++++++ISW+A+I GYV++G    A++ F +    GI  D   +  ++        LE  
Sbjct: 388 MTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENV 447

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL--DGFSCKYTAEFNAILSGFM 438
             LHG+++K G  S   L TAL+  YAK G ++ A+ L   +    K    +N+++S   
Sbjct: 448 KYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHA 507

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAA 497
                D      L+++ + +  +PD VTF  LL+   +   + +G+       ++ G   
Sbjct: 508 NH--GDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQP 565

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFEEM 556
                  ++ +  + G I  A ++ K +  + D   W  +LSA  +H   K A    E++
Sbjct: 566 SQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKL 625



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 154/322 (47%), Gaps = 5/322 (1%)

Query: 255 DFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +F        N +S+ +     ++  +Q+H   +  G  +  ++ + ++  Y   G+   
Sbjct: 18  NFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNH 77

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           + ++F ++ + NL  + A++    R G   + +  + + +   +  D      V+  CS 
Sbjct: 78  SLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSS 137

Query: 374 CSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
            SN+  G  +HG+ +K G+ L DV + TAL ++Y +  + ++A  L D  S K     ++
Sbjct: 138 FSNVGFGRTIHGYLVKLGFDLFDV-VATALAEMYEECIEFENAHQLFDKRSVKDLGWPSS 196

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           + +   +   D+ E +  +F +     + PD  TF  LL   A    +   + +H  +I 
Sbjct: 197 LTTEGPQN--DNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIV 254

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +  + D++V  A++++Y+K  S+  A ++F  + ++D V WN M++AYA  G     L L
Sbjct: 255 SKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLEL 314

Query: 553 FEEMKREGFAPDDISILGVLQA 574
           F+ M R G   D  + L V+ +
Sbjct: 315 FKSMARSGIRSDLFTALPVISS 336


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 194/600 (32%), Positives = 315/600 (52%), Gaps = 52/600 (8%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +QIHA  IK+ F + + +  +     F SG    A+              NF+I  Y K 
Sbjct: 60  KQIHAHIIKTHFHHALQIPLN----DFPSGLSPSAQ-------------WNFVITSYTKR 102

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            +   A +V+  L   DFE +++   +V+  C +    + GK++HG  +K G+ R++ VG
Sbjct: 103 NQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVG 162

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA++ MYG+    E A  +FD + ER+++SW+ +I    R+     A+    E   + + 
Sbjct: 163 NALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVR 222

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD--VRLGTALVDIYAKGGDLKSAR 416
                + ++++  +  +N+ +G  +H + I++       V   TAL+D+YAK G L  AR
Sbjct: 223 PSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR 282

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDE----------EDVMV---------------- 450
            L +G + K    + A+++G +     +E           DVM+                
Sbjct: 283 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQ 342

Query: 451 ---LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
              LF Q R +G+ P  VT   LLSL A    L  G+ +H+Y  K     D I+  AL+ 
Sbjct: 343 AFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVD 402

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MYAKCG I+ A ++F     RDI  WNA+++ +A+HG G+ AL +F EM+R+G  P+DI+
Sbjct: 403 MYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDIT 462

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            +G+L AC ++GL   G  LF ++   +GL P +EH+ CMVDLLGRAG L EA  +I S 
Sbjct: 463 FIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSM 522

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           P   + ++W  LV+  +L  N +   LA+ +LL++EP++ G  +L+SN+YA      +AA
Sbjct: 523 PIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAA 582

Query: 688 KVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDS 747
            VR TM  + + KE G S IE++  +H F+   + HP+   I   L     EM+ K+ ++
Sbjct: 583 GVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEML----AEMRRKLNEA 638



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/457 (22%), Positives = 195/457 (42%), Gaps = 64/457 (14%)

Query: 26  KVPINTFSP--NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDL--------- 74
           ++P+N F    +P +Q  ++ +  +     R  L N + QL K+     +          
Sbjct: 76  QIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNAL-NVYAQLRKMDFEVDNFMAPSVLKAC 134

Query: 75  ------KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
                 +LG+ +H F+LK G   D F  N L+ +Y +   ++ A+ +FD M+ R  ++W+
Sbjct: 135 GQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWS 194

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++I+    + +++  L +  +M   + + +E     ++   +   +   G+ +HA+ I++
Sbjct: 195 TMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRN 254

Query: 189 GFENNVFVG----TSLISMYFH--------------------------SGCFR-----EA 213
              NN  +G    T+L+ MY                            +GC R     EA
Sbjct: 255 S--NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEA 312

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
             +F     +DV     M+  Y +A   + AF++F  + +S   P   T  +++S+C   
Sbjct: 313 RALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVA 372

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             ++ GK +H    K  V  +  +  A+V MY K G    A R+F     R++  W A+I
Sbjct: 373 GALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAII 432

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL-----HGFAI 388
           +G+   G+G +A++ F E    G+  +      ++  CS    +  G +L     H F  
Sbjct: 433 TGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF-- 490

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
             G +  +     +VD+  + G L  A  ++     K
Sbjct: 491 --GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIK 525



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 134/308 (43%), Gaps = 37/308 (12%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTF---EANNLINLYAKF-------------- 106
           +V +   + ++++G+A+HA+++++ S N+         L+++YAK               
Sbjct: 231 MVNLFADTANMRMGKAMHAYVIRN-SNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT 289

Query: 107 -----------------NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
                            NRL+ A+ LFD    R  + WT+++  Y      +    +   
Sbjct: 290 QKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ 349

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M  S  +  + T   +L  C++      G+ +H++  K   E +  + T+L+ MY   G 
Sbjct: 350 MRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGD 409

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
              A  +F     +D+   N +I  +   G  E A  +F  +     +PND TF  ++  
Sbjct: 410 INAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHA 469

Query: 270 CYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLI 327
           C     V EGK+L   +   FG+V +I     +V + G+ G+ +EA  M  ++  + N I
Sbjct: 470 CSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTI 529

Query: 328 SWTALISG 335
            W AL++ 
Sbjct: 530 VWGALVAA 537


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 183/586 (31%), Positives = 311/586 (53%), Gaps = 38/586 (6%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCF---REAENVFRGLAYKDVRCVNFMILEYNK 237
           IHA  IK+G  N  +  + LI     S  F     A +VF  +   ++   N M   +  
Sbjct: 9   IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           + +   A  ++V ++S    PN YTF  ++  C ++   +EG+Q+HG  +K G   ++ V
Sbjct: 69  SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128

Query: 298 GNAIVTMYGKHGMSEEA-------------------------------ERMFDAISERNL 326
             ++++MY ++G  E+A                               ++MFD I  +++
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           +SW A+ISGY  +G+  +A+  F + +   +  D S + TV+  C+   ++ELG Q+H +
Sbjct: 189 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSW 248

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
              HG+ S++++  AL+D+Y+K G+L++A  L +G   K    +N ++ G+     +  +
Sbjct: 249 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTH--MNLYK 306

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK--TGYAADVIVGNA 504
           + ++LF +   +G  P+ VT   +L   A    +  GR +H Y  K   G A    +  +
Sbjct: 307 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTS 366

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           LI MYAKCG I+ A Q+F  I  + + SWNAM+  +A+HG    +  +F  M++ G  PD
Sbjct: 367 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPD 426

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
           DI+ +G+L AC +SG+ + G  +F  + Q Y + P LEH+ CM+DLLG +G   EA  +I
Sbjct: 427 DITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 486

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
           N+       ++W +L+   K+  N +     ++ L+ +EP++ GS++L+SN+YA  G  +
Sbjct: 487 NTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWN 546

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           E A  R  +ND  + K  GCS IEIDS +H F+   K HP + EIY
Sbjct: 547 EVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 592



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 236/507 (46%), Gaps = 44/507 (8%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLIN---LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + +HA ++K+G  N  +  + LI    L   F+ L  A  +F+ +   + + W ++ +G+
Sbjct: 7   RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
               D  S L +   M       N +T   +L++C+  +    G+QIH   +K G + ++
Sbjct: 67  ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126

Query: 195 FVGTSLISMYFHSGCFREAENVF--------------------RG-----------LAYK 223
           +V TSLISMY  +G   +A  VF                    RG           +  K
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV   N MI  Y + G  + A  +F  ++ ++  P++ T   V+S C ++  +E G+Q+H
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 246

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
                 G    + + NA++ +Y K G  E A  +F+ +  +++ISW  LI GY       
Sbjct: 247 SWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYK 306

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTA 401
           +A+  F E L  G   +   + +++  C+    +++G  +H +  K   G  +   L T+
Sbjct: 307 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTS 366

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGM 460
           L+D+YAK GD+++A  + +    K  + +NA++ GF M   AD   D+   FS+ R  G+
Sbjct: 367 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDI---FSRMRKNGI 423

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGA 518
           EPD +TF  LLS  +    L  GR +   S+   Y     + +   +I +    G    A
Sbjct: 424 EPDDITFVGLLSACSHSGMLDLGRHIFR-SMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 482

Query: 519 FQIFKGIS-DRDIVSWNAMLSAYALHG 544
            ++   +  + D V W ++L A  +HG
Sbjct: 483 EEMINTMEMEPDGVIWCSLLKACKMHG 509



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 175/390 (44%), Gaps = 42/390 (10%)

Query: 30  NTFSPNPKSQVA-YLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLK 86
           +  S +P S +  Y+C IS        LL N +  P L+K    S   K GQ +H  +LK
Sbjct: 66  HALSSDPVSALKLYVCMIS------LGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLK 119

Query: 87  SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK-------------- 132
            G   D +   +LI++Y +  RL+ A K+FD    R  +++T+LIK              
Sbjct: 120 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKM 179

Query: 133 -----------------GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
                            GY + G+Y+  L +  DM ++  + +E T   ++ AC+     
Sbjct: 180 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 239

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G Q+H++    GF +N+ +  +LI +Y   G    A  +F GL YKDV   N +I  Y
Sbjct: 240 ELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGY 299

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
                 + A  +F  +L S   PND T  +++  C     ++ G+ +H    K   GV  
Sbjct: 300 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVAN 359

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             S+  +++ MY K G  E A ++F++I  ++L SW A+I G+   G    + + F    
Sbjct: 360 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMR 419

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQL 383
             GI  D      ++  CS    L+LG  +
Sbjct: 420 KNGIEPDDITFVGLLSACSHSGMLDLGRHI 449



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 134/267 (50%), Gaps = 4/267 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG ++LG+ VH+++   G  ++    N LI+LY+K   L+ A  LF+G+  +  I+W +L
Sbjct: 236 SGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTL 295

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK--S 188
           I GY     Y+  L +  +M RS E  N+ T   IL AC+ L     G  IH +  K   
Sbjct: 296 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 355

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  N   + TSLI MY   G    A  VF  + +K +   N MI  +   G ++ +F +F
Sbjct: 356 GVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIF 415

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGK 307
             +  +  EP+D TF  ++S C  +  ++ G+ +   +   + +  ++     ++ + G 
Sbjct: 416 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGH 475

Query: 308 HGMSEEAERMFDAIS-ERNLISWTALI 333
            G+ +EAE M + +  E + + W +L+
Sbjct: 476 SGLFKEAEEMINTMEMEPDGVIWCSLL 502


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 202/642 (31%), Positives = 354/642 (55%), Gaps = 16/642 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINL---YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + +HA  +  G  +  +  + L +L   YA F     A+KLFD +   S  +W ++I+ Y
Sbjct: 38  KQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMY 97

Query: 135 LDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACS--LLEDRIFGEQIHAFAIKSGFE 191
            + G     LG+   M  S  ++ + +T   +++AC   LL +   G  IHA  + SGF+
Sbjct: 98  TNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE--MGALIHARTVMSGFD 155

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++ FV  SL++MY + G    A  VF  +  + +   N MI  Y K G  + A  VF  +
Sbjct: 156 SDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWM 215

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           +    EP+  T  +V+ VC     +E G+++H L     +  +ISV N+++ MY K G  
Sbjct: 216 IGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNM 275

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAI--NGFLEFLDLGICCDSSCLATVID 369
           +EA+ +F  + +R+++SWT +++GY+ +G    A+     ++F    +  +   LA+V+ 
Sbjct: 276 DEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES--VKPNFVTLASVLS 333

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+   +L+ G  LHG+AI+    S+V + TAL+D+YAK  ++  +  +    S + TA 
Sbjct: 334 ACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAP 393

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NAI+SG +          + LF Q  +  ++P+  T + LL   A    L + R++H Y
Sbjct: 394 WNAIISGCIHN--GLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGY 451

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI--SDRDIVSWNAMLSAYALHGLGK 547
            I++G+ + + V   LI +Y+KCGS++ A  IF GI   D+DI++W+A+++ Y +HG G+
Sbjct: 452 LIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGE 511

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            A+ LF++M + G  P++I+   +L AC ++GL + G+ LF  + +   +    +H+ C+
Sbjct: 512 TAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCV 571

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           +DLLGRAGRL EA  LI +  F  +  +W  L+    +  N +   +A+K L +LEP + 
Sbjct: 572 IDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNT 631

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           G+++L++N+Y+  G   +A  VR  MN++ L K    S IE+
Sbjct: 632 GNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 245/488 (50%), Gaps = 20/488 (4%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVF---VGTSLISMYFHSGCFREAENVFRGLA 221
           +L+ C+  +     +QIHA  I  G  ++ +   + +SL + Y   GC   A  +F  L 
Sbjct: 24  LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELR 83

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE-PNDYTFTNVISVCYENLGVEEGK 280
              +   N MI  Y  +G S  A  +FV +L+S    P++YT+  VI  C + L  E G 
Sbjct: 84  NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGA 143

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +H   V  G   +  V N+++ MY   G  E A R+FD + ER L+SW  +I+GY ++G
Sbjct: 144 LIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +A+  F   +  GI  D + + +V+  CS    LE+G ++H          D+ +  
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           +L+D+YAK G++  A+M+      +    +  +++G++  +  D    ++L    +   +
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYI--LNGDARSALLLCQMMQFESV 321

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +P+ VT + +LS  AS   L  GR LH ++I+    ++VIV  ALI MYAKC +++ +F+
Sbjct: 322 KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFR 381

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F   S +    WNA++S    +GL + A+ LF++M  E   P+D ++  +L A  Y+ L
Sbjct: 382 VFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA--YAFL 439

Query: 581 SEGGICLFNEIEQIY------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           ++       +   ++      G    +E    ++D+  + G L  A N+ N  P  +  +
Sbjct: 440 TD-----LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDI 494

Query: 635 L-WRTLVS 641
           + W  +++
Sbjct: 495 ITWSAIIA 502



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 237/479 (49%), Gaps = 18/479 (3%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           ++G  +HA  + SG  +D F  N+L+ +Y     ++VA+++FD M  R+ ++W ++I GY
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
             +G  +  L +   M     + +  T   +L  CS L++   G ++HA         ++
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            V  SL+ MY   G   EA+ +F  +  +DV     M+  Y   G++  A  +   +   
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
             +PN  T  +V+S C     ++ G+ LHG A++  +  E+ V  A++ MY K      +
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            R+F   S++    W A+ISG + +G   KAI  F + L   +  + + L +++   +  
Sbjct: 380 FRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFL 439

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT--AEFNA 432
           ++L+    +HG+ I+ G+LS + + T L+DIY+K G L+SA  + +G   K      ++A
Sbjct: 440 TDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSA 499

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY--- 489
           I++G+   +    E  + LF Q   +G++P+ +TF+ +L   +    +  G  L  +   
Sbjct: 500 IIAGY--GMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE 557

Query: 490 ----SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
               S++T +   V      I +  + G ++ A+++ + ++ R +   W A+L +  +H
Sbjct: 558 DNQMSLRTDHYTCV------IDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIH 610



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 178/352 (50%), Gaps = 7/352 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L++G+ VHA +       D    N+L+++YAK   +D AQ +F  M  R  ++WT+++ 
Sbjct: 239 ELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMN 298

Query: 133 GYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           GY+ +GD  S L + C M + E  K N  T + +L AC+ L     G  +H +AI+   E
Sbjct: 299 GYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLE 357

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           + V V T+LI MY        +  VF   + +     N +I      G S  A  +F  +
Sbjct: 358 SEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQM 417

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           L    +PND T  +++        +++ + +HG  ++ G +  I V   ++ +Y K G  
Sbjct: 418 LMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSL 477

Query: 312 EEAERMFDAI--SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           E A  +F+ I   ++++I+W+A+I+GY   GHG  AI+ F + +  G+  +     +++ 
Sbjct: 478 ESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILH 537

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLL 419
            CS    ++ GL L  F ++   +S +R    T ++D+  + G L+ A  L+
Sbjct: 538 ACSHAGLVDEGLGLFKFMLEDNQMS-LRTDHYTCVIDLLGRAGRLEEAYELI 588


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 333/636 (52%), Gaps = 10/636 (1%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + G+ VH    K G   + F    L+NLYAK  R+D A  +FD +  R+ +TWT++I GY
Sbjct: 154 RFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGY 213

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
              G     L +   M     + +    +    ACS L     G QIH +A ++  E++ 
Sbjct: 214 SQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDA 273

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            V  +LI +Y        A  +F  +  +++     MI  Y +      A  +F  L  +
Sbjct: 274 SVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQA 333

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
            ++P+ +  T++++ C     + +G+Q+H   +K  +  +  V NA++ MY K     EA
Sbjct: 334 GWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEA 393

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE-FLDLGICCDSSCLATVIDGCSV 373
             +F+A++E + IS+ A+I GY R G     + G +E F  +  C     L T +    V
Sbjct: 394 RAVFEALAEDDAISYNAMIEGYARLGD----LTGAVEIFGKMRYCSLKPSLLTFVSLLGV 449

Query: 374 CS---NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            S   +LEL  Q+HG  +K G   D+  G+AL+D+Y+K   +  A+++      +    +
Sbjct: 450 SSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIW 509

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NA++ G  +   +  E+ + LF++ R++G+ P+  TF  L++++++ A +  G+  HA  
Sbjct: 510 NAMIFGLAQN--ERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQI 567

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK G  +D  + NALI MYAKCG I+    +F+    +D++ WN+M+S YA HG  + AL
Sbjct: 568 IKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEAL 627

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            +F  M+  G  P+ ++ + VL AC ++GL + G+  FN ++  Y + P  EH+A +V+L
Sbjct: 628 HVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNL 687

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
            GR+G+L  A   I   P      +WR+L+S   L  N +    A++  L  +P D+G  
Sbjct: 688 FGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPS 747

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
           +L+SN+YA +G+  +A K+R  M+   + KE G SW
Sbjct: 748 VLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 183/659 (27%), Positives = 317/659 (48%), Gaps = 20/659 (3%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           HA  + SG   D F AN L+  Y+K  RL  A++LFD M  R+ ++W S I  Y   G  
Sbjct: 53  HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112

Query: 141 ESVLGI------ACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           +  L +      A       E  NE   +  L AC+      FGEQ+H  A K G + NV
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           FVGT+L+++Y  +G    A +VF  L  ++      +I  Y++AG++ +A  +F  +   
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLD 232

Query: 255 DFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              P+ +   +  S C   LG VE G+Q+HG A +     + SV NA++ +Y K      
Sbjct: 233 GVRPDRFVLASAASAC-SGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLL 291

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A R+FD++  RNL+SWT +I+GY+++    +A++ F +    G   D     ++++ C  
Sbjct: 292 ARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGS 351

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + +  G Q+H   IK    SD  +  AL+D+YAK   L  AR + +  +      +NA+
Sbjct: 352 LAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAM 411

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + G+      D    + +F + R   ++P  +TF  LL +S+S++ L   + +H   +K+
Sbjct: 412 IEGYAR--LGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKS 469

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G + D+  G+ALI +Y+K   +D A  +F  + +RD+V WNAM+   A +  G+ A+ LF
Sbjct: 470 GTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLF 529

Query: 554 EEMKREGFAPDDISILGVLQ-ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
             ++  G  P++ + + ++  A   + +  G       I+      P + +   ++D+  
Sbjct: 530 ARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISN--ALIDMYA 587

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSV--SKLMANSKFSILASKRLLDLEPKDAGSF 670
           + G + E   L+  S   +  + W +++S       A     +        +EP    +F
Sbjct: 588 KCGFIEEG-RLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYV-TF 645

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           + V +  A  G++DE      +M   + + E G       S ++ F  SGK H   E I
Sbjct: 646 VSVLSACAHAGLVDEGLHHFNSMKT-KYAVEPGTE--HYASVVNLFGRSGKLHAAKEFI 701



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 244/478 (51%), Gaps = 6/478 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G G ++ G+ +H +  ++ +++D    N LI+LY K +RL +A++LFD M  R+ ++WT+
Sbjct: 250 GLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTT 309

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I GY+ +      + +   + ++  + +   C+ IL +C  L     G Q+HA  IK+ 
Sbjct: 310 MIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKAD 369

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E++ +V  +LI MY       EA  VF  LA  D    N MI  Y + G+   A  +F 
Sbjct: 370 LESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFG 429

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +     +P+  TF +++ V      +E  KQ+HGL VK G   ++  G+A++ +Y K  
Sbjct: 430 KMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFS 489

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           + ++A+ +F  +  R+++ W A+I G  ++  G +A+  F      G+  +      ++ 
Sbjct: 490 LVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVT 549

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             S  +++  G Q H   IK G  SD  +  AL+D+YAK G ++  R+L +    K    
Sbjct: 550 VASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVIC 609

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N+++S + +      E+ + +F     AG+EP+ VTF  +LS  A  A LV     H  
Sbjct: 610 WNSMISTYAQH--GHAEEALHVFGMMEGAGVEPNYVTFVSVLSACA-HAGLVDEGLHHFN 666

Query: 490 SIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG 544
           S+KT YA +    +  +++ ++ + G +  A +  + +    + + W ++LSA  L G
Sbjct: 667 SMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFG 724



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 2/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +S    DL+L + +H  ++KSG+  D +  + LI++Y+KF+ +D A+ +F  M  R 
Sbjct: 446 LLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRD 505

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W ++I G   +   E  + +   +  S    NE T   ++   S L     G+Q HA
Sbjct: 506 MVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHA 565

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             IK+G +++  +  +LI MY   G   E   +F     KDV C N MI  Y + G +E 
Sbjct: 566 QIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEE 625

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIV 302
           A HVF  +  +  EPN  TF +V+S C     V+EG    + +  K+ V        ++V
Sbjct: 626 ALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVV 685

Query: 303 TMYGKHGMSEEAERMFDAISERNLIS-WTALIS 334
            ++G+ G    A+   + +    + + W +L+S
Sbjct: 686 NLFGRSGKLHAAKEFIERMPIEPVATIWRSLLS 718


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 201/668 (30%), Positives = 340/668 (50%), Gaps = 2/668 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +H+ + +S    D F    L+N Y K   L  A+K+FDGM  RS  TW S+I  
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y           I   M +  E+ +  T   IL+AC   E    G+ +     ++ FE +
Sbjct: 236 YSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELD 295

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FVGT+LI+MY       +A  VF  +   ++   + +I  +   G    A   F  +  
Sbjct: 296 LFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQ 355

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               PN  TF ++++      G+EE  ++H L  + G+    ++ NA+V +YG+    ++
Sbjct: 356 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDD 415

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +FD +   NLISW ++I  YV+      A+  F      GI  D     T++  C++
Sbjct: 416 ARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTI 475

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            S+      +H    + G      + T+LV++YAK G+L  A ++L     +    +N +
Sbjct: 476 GSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVL 535

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++G+   +     + +  + + +L  +  D VTF  +L+   S   L  G+ +H+ +++ 
Sbjct: 536 INGY--ALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVEC 593

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G  +DVIV NAL  MY+KCGS++ A +IF  +  R  VSWN ML AYA HG  +  L L 
Sbjct: 594 GLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLI 653

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            +M++EG   + I+ + VL +C ++GL   G   F+ +    G+    EH+ C+VDLLGR
Sbjct: 654 RKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGR 713

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AG+L EA   I+  P     + W +L+   ++  +     LA+ +LL+L+P ++ + +++
Sbjct: 714 AGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVL 773

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+Y+ +G    AAK+R  M   R+ K  G S I++ +K+H F      HP + EIY K+
Sbjct: 774 SNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKV 833

Query: 734 DLLNDEMK 741
           + L   M+
Sbjct: 834 EELCFAMR 841



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 149/575 (25%), Positives = 275/575 (47%), Gaps = 17/575 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+ G  VHA  L+ G   +T  A  L+N+Y K   L  AQ +F+ M  ++ +TW +++ 
Sbjct: 73  ELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLG 132

Query: 133 GY-LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            Y L    ++  + +   M     K N  T   +L +    +    G+ IH+   +S   
Sbjct: 133 VYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHS 192

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VFV T+L++ Y   G   +A  VF G+  + V   N MI  Y+ +  S  AF +F  +
Sbjct: 193 LDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRM 252

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                  +  TF +++  C     ++ GK +     +     ++ VG A++TMY +    
Sbjct: 253 QQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSP 312

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+A ++F  + + NLI+W+A+I+ +   GH G+A+  F      GI  +     ++++G 
Sbjct: 313 EDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGF 372

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  S LE   ++H    +HG      +  ALV++Y +      AR + D         +N
Sbjct: 373 TTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWN 432

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV----RGRSL- 486
           +++  +++   +  +D + LF   +  G++PD V F  +L      AC +    R R L 
Sbjct: 433 SMIGIYVQ--CERHDDALQLFRTMQQQGIQPDRVNFMTILG-----ACTIGSHGRTRKLV 485

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H    ++G     +V  +L+ MYAK G +D A  I + + ++ I +WN +++ YALHG  
Sbjct: 486 HQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRS 545

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYS-GLSEGGICLFNEIEQIYGLRPILEHFA 605
           + AL  +++++ E    D ++ + VL AC  S  L+EG +   N +E   GL   +    
Sbjct: 546 REALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE--CGLDSDVIVKN 603

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            + ++  + G +  A  + +S P   S + W  ++
Sbjct: 604 ALTNMYSKCGSMENARRIFDSMPI-RSAVSWNGML 637



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 266/593 (44%), Gaps = 8/593 (1%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y++   L  A   F  +  R+ ++W  +I  Y     ++  L +   M       N  T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
              +L +C    +   G  +HA +++ GF  N  V T+L++MY   G   +A++VF  +A
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 222 YKDVRCVNFMILEYNKAGES-EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
            K+V   N M+  Y+  G   ++A  +F  +L    + N  TF NV++   +   + +GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +H    +     ++ V  A+V  Y K G   +A ++FD +  R++ +W ++IS Y  S 
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
             G+A   F      G  CD     +++D C     L+ G  +     +  +  D+ +GT
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           AL+ +YA+    + A  +           ++AI++ F +     E   +  F   +  G+
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGE--ALRYFRMMQQEGI 358

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
            P+ VTF  LL+   + + L     +H    + G      + NAL+ +Y +C S D A  
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDART 418

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F  +   +++SWN+M+  Y        AL LF  M+++G  PD ++ + +L AC     
Sbjct: 419 VFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSH 478

Query: 581 SEGGICLFNEIEQI-YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
                 +   +E+   G  P+++    +V++  +AG L  A  +I      +    W  L
Sbjct: 479 GRTRKLVHQCVEESGLGGSPLVQ--TSLVNMYAKAGELDVA-EVILQEMDEQQITAWNVL 535

Query: 640 VSVSKLMANSKFSILASKRL-LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
           ++   L   S+ ++ A ++L L+  P D  +FI V N       L E   + +
Sbjct: 536 INGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHS 588



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 48/263 (18%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  L  G+ +H+  ++ G  +D    N L N+Y+K   ++ A+++FD M +RSA++W  +
Sbjct: 577 STSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGM 636

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           ++ Y   G+ E VL +   M +   K N  T   +L +CS           HA  I  G 
Sbjct: 637 LQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCS-----------HAGLIAEGC 685

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR--CVNFMILEYNKAGESEMAFHVF 248
           +            YFHS          RG+  K     C+  ++    K  E+E      
Sbjct: 686 Q------------YFHSLGHD------RGIEVKTEHYGCLVDLLGRAGKLQEAEK----- 722

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA-----IVT 303
            ++     EP   T+ +++  C     ++ GK      +  G + E+  GN+     +  
Sbjct: 723 -YISKMPLEPGIVTWASLLGACRVQKDLDRGK------LAAGKLLELDPGNSSASVVLSN 775

Query: 304 MYGKHGMSEEAERMFDAISERNL 326
           +Y + G  + A ++  A++ R +
Sbjct: 776 IYSERGDWKNAAKLRRAMASRRV 798


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 170/486 (34%), Positives = 284/486 (58%), Gaps = 3/486 (0%)

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            EP    ++ +++ C     +++G+ +H          ++ + N I+ MY K G  EEA+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +FD +  ++++SWT LISGY +SG   +A+  F + L LG   +   L++++       
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +   G QLH F++K+GY  +V +G++L+D+YA+   ++ A+++ +  + K    +NA+++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G   K   + E VM LF Q    G EP   T+S + +  AS   L +G+ +HA+ IK+G 
Sbjct: 281 GHARK--GEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG 338

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
                +GN LI MYAK GSI  A ++F+ +  +DIVSWN+++S YA HGLG  AL LFE+
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 398

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           M +    P++I+ L VL AC +SGL + G   F E+ + + +   + H   +VDLLGRAG
Sbjct: 399 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHHVTVVDLLGRAG 457

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           RL+EA   I   P   +  +W  L+   ++  N    + A++++ +L+P D+G  +L+SN
Sbjct: 458 RLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSN 517

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +YA  G L +AAKVR  M +  + KE  CSW+EI++++H FVA+   HP  EEI    + 
Sbjct: 518 IYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEK 577

Query: 736 LNDEMK 741
           ++ ++K
Sbjct: 578 ISGKIK 583



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 187/363 (51%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK G+A+HA +  S  ++D    N ++N+YAK   L+ AQ LFD M  +  ++WT LI G
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G     L +   M     + NE T S +L+A         G Q+HAF++K G++ N
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V VG+SL+ MY      REA+ +F  LA K+V   N +I  + + GE E    +F+ +L 
Sbjct: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR 300

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
             FEP  +T+++V + C  +  +E+GK +H   +K G      +GN ++ MY K G  ++
Sbjct: 301 QGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKD 360

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+++F  + +++++SW ++ISGY + G G +A+  F + L   +  +     +V+  CS 
Sbjct: 361 AKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSH 420

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L+ G        KH   + V     +VD+  + G L  A   ++    K TA     
Sbjct: 421 SGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGA 480

Query: 434 LSG 436
           L G
Sbjct: 481 LLG 483



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 190/382 (49%), Gaps = 3/382 (0%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           S +L  C+ L     G  IHA    S FE+++ +   +++MY   G   EA+++F  +  
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           KD+     +I  Y+++G++  A  +F  +L   F+PN++T ++++           G+QL
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H  ++K+G    + VG++++ MY +     EA+ +F++++ +N++SW ALI+G+ R G G
Sbjct: 229 HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
              +  FL+ L  G        ++V   C+   +LE G  +H   IK G      +G  L
Sbjct: 289 EHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 348

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+YAK G +K A+ +      +    +N+I+SG+ +     E   + LF Q   A ++P
Sbjct: 349 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE--ALQLFEQMLKAKVQP 406

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           + +TF  +L+  +    L  G+       K    A V     ++ +  + G ++ A +  
Sbjct: 407 NEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFI 466

Query: 523 KGISDRDIVS-WNAMLSAYALH 543
           + +  +   + W A+L +  +H
Sbjct: 467 EEMPIKPTAAVWGALLGSCRMH 488



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 16/264 (6%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG L+ G+ VHA ++KSG Q   +  N LI++YAK   +  A+K+F  ++ +  ++W S+
Sbjct: 320 SGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSI 379

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIK 187
           I GY   G     L +   M +++ + NE T   +L ACS   LL++   G+       K
Sbjct: 380 ISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDE---GQYYFELMKK 436

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
              E  V    +++ +   +G   EA      +  K    V   +L   +  ++ M   V
Sbjct: 437 HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKN-MDLGV 495

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVRE-----ISVGNAI 301
           +      + +P+D     ++S  Y + G + +  ++  +  + GV +E     + + N +
Sbjct: 496 YAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEV 555

Query: 302 ---VTMYGKHGMSEEAERMFDAIS 322
              V     H M EE +RM++ IS
Sbjct: 556 HVFVANDDSHPMREEIQRMWEKIS 579


>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 200/624 (32%), Positives = 336/624 (53%), Gaps = 20/624 (3%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D +    L++  AK + ++ A K+FDG+       W ++I G  + G+ +   G+  DM 
Sbjct: 111 DAYSWTTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMN 170

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
           +   K +++T + +L  CSL E   +G  +H+  IKSGF     V  SLI+MYF  GC  
Sbjct: 171 KMGVKADKYTFATMLSLCSL-ELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVV 229

Query: 212 EAENVFRGL---AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
           +A  VF        +D    N MI  +     SE AF +F  +    F+P + TF +V+S
Sbjct: 230 DACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMS 289

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
            C     +  G Q    A+K G V  ++V NA++TMY   G   E + +F+ + ER+++S
Sbjct: 290 SCSS---LRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVS 346

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           W  ++S +++     +A+  +L+    GI  D     +++   +   +L++   +H    
Sbjct: 347 WNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLL---AATDSLQVVEMIHSLLC 403

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE--E 446
           K G L  + +  ALV  Y + G +K A  +  G   K    +N+I+SGF+      +  E
Sbjct: 404 KSG-LVKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLE 462

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
               L S Q    ++P+  + S +LS+ +S + +  G+ +H Y ++ G++++V +GNAL+
Sbjct: 463 QFSALLSTQ----VKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALV 518

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE-GFAPDD 565
           TMYAKCGS+D A ++F  + +RD ++WNA++SAYA HG G+ A+  FE M+   G  PD 
Sbjct: 519 TMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQ 578

Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
            +   VL AC ++GL + GI +F+ + ++YG  P ++HF+C+VDLLGR+G L EA  +I 
Sbjct: 579 ATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIK 638

Query: 626 SSPF-SESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
           S  F + S + W +L S      N       ++ +L+ +  +   ++L+SN+ A  G  +
Sbjct: 639 SGYFGAHSNICW-SLFSACAAHGNLGLGRTVARLILERDHNNPSVYVLLSNICAAAGQWE 697

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIE 708
           EAA +R  M +    K+ GCSWI 
Sbjct: 698 EAANLREMMREFGTIKQPGCSWIR 721



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 207/458 (45%), Gaps = 66/458 (14%)

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
           +N M+    ++ +   +  +FVH  SS F P+ Y  +  I+          G QLH LAV
Sbjct: 14  LNHMLAALARSNQHTQSLKLFVHAHSS-FTPDHYILSTAITAAANARRAAFGAQLHALAV 72

Query: 288 KFGVVREISVGNAIVTMYGKHGMS--------------------------------EEAE 315
           + G+     V N+++++Y K                                    E A 
Sbjct: 73  RTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLDSVEHAL 132

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++FD I + ++  W A+I+G    G+   A   F +   +G+  D    AT++  CS+  
Sbjct: 133 KVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLCSL-E 191

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL----DGFSCKYTAEFN 431
             + G  +H   IK G+L    +  +L+ +Y K G +  A  +     +G S  Y + +N
Sbjct: 192 LFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVS-YN 250

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A++ GF     +  ED  ++F   +    +P  VTF  ++S  +S   L  G    + +I
Sbjct: 251 AMIDGFAS--VERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSS---LRAGCQAQSQAI 305

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+   V V NA++TMY+  G +     IF+G+ +RD+VSWN M+S +    L + A+L
Sbjct: 306 KMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAML 365

Query: 552 LFEEMKREGFAPDDISILGVLQAC--------IYSGLSEGGICLFNEIEQIYGLRPILEH 603
            + +M+REG  PD+ +   +L A         I+S L + G+    +IE +  L      
Sbjct: 366 SYLKMRREGIEPDEFTYGSLLAATDSLQVVEMIHSLLCKSGLV---KIEVLNAL------ 416

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               V    R G++  A  + +  P+ +S + W +++S
Sbjct: 417 ----VSAYCRHGKIKRAFQIFSGVPY-KSLISWNSIIS 449


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 203/694 (29%), Positives = 358/694 (51%), Gaps = 15/694 (2%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF--DGMLVRSAIT 126
           I SG  +L QA  A   +   +N+ F  N +++ Y++  +L  A  LF      +R A+T
Sbjct: 45  ISSG--RLAQA-RALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVT 101

Query: 127 WTSLIKGYLDDGDYESVLGIAC--DMYRSEEKFNEHTCSVILE---ACSLLEDRIFGEQI 181
           WT +I  +       +   ++   DM R     +  T + +L    A       I    +
Sbjct: 102 WTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASL 161

Query: 182 HAFAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           H FA+K G   +NV V  +L+  Y   G    A  VF+ + ++D    N M++  +K G 
Sbjct: 162 HPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGS 221

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A  +F  +         +TF+ V++V      +  G+Q+HGL  +      + V N+
Sbjct: 222 HAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNVFVNNS 280

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++  Y K    +E +++F  + ER+ +S+  +I+GY  +      +  F E   L     
Sbjct: 281 LLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQ 340

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +   A+++       ++ +G Q+H   +  G  S+  +G AL+D+Y+K G L +A+    
Sbjct: 341 ALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFI 400

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             + K    + A+++G ++     +E+ + LF   R AG+ PD  TFS  +  S++ A +
Sbjct: 401 NKNDKTGVSWTAMITGCVQN--GQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMI 458

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             GR LH+Y I++G+ + V  G+AL+ MY KCG +D A Q F  + +R+ +SWNA++SAY
Sbjct: 459 GLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAY 518

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           A +G  K A+ +FE M   GF PD ++ L VL AC ++GL+E  +  F  +E  YG+ P 
Sbjct: 519 AHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPW 578

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
            EH++C++D LGR GR  +   ++   PF + P++W +++   +   N   + +A+++L 
Sbjct: 579 KEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLF 638

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
            +   DA  ++++SN++A  G  ++AA V+  M D  L KE G SW+E+  K++ F ++ 
Sbjct: 639 SMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSND 698

Query: 721 KDHPESEEIYSKLDLLNDEM-KLKVKDSSAFELQ 753
           + +P   EI  +L+ L  EM K   K  ++  LQ
Sbjct: 699 QTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQ 732



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 146/313 (46%), Gaps = 9/313 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ ++ G GDL LG+ VH  + ++ S N  F  N+L++ Y+K + LD  +KLF  M+ R 
Sbjct: 247 VLTVATGVGDLCLGRQVHGLVARATSSN-VFVNNSLLDFYSKCDCLDEMKKLFHEMIERD 305

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEE--KFNEHTC--SVILEACSLLEDRIFGE 179
            +++  +I GY     +     I   ++R  +   F+      + +L     +     G+
Sbjct: 306 NVSYNVMIAGYA----WNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGK 361

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           QIHA  +  G  +   VG +LI MY   G    A+  F     K       MI    + G
Sbjct: 362 QIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNG 421

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           + E A  +F  +  +   P+  TF++ I        +  G+QLH   ++ G +  +  G+
Sbjct: 422 QQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGS 481

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ MY K G  +EA + FD + ERN ISW A+IS Y   G    AI  F   L  G   
Sbjct: 482 ALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKP 541

Query: 360 DSSCLATVIDGCS 372
           DS    +V+  CS
Sbjct: 542 DSVTFLSVLSACS 554



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 139/275 (50%), Gaps = 2/275 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  L+ ++     + +G+ +HA L+  G  ++    N LI++Y+K   LD A+  F    
Sbjct: 344 YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN 403

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            ++ ++WT++I G + +G  E  L + C M R+    +  T S  ++A S L     G Q
Sbjct: 404 DKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQ 463

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H++ I+SG  ++VF G++L+ MY   GC  EA   F  +  ++    N +I  Y   G+
Sbjct: 464 LHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQ 523

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN-LGVEEGKQLHGLAVKFGVVREISVGN 299
           ++ A  +F  +L   F+P+  TF +V+S C  N L  E  K    +  ++G+       +
Sbjct: 524 AKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYS 583

Query: 300 AIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            ++   G+ G  ++ + M   +  E + I W++++
Sbjct: 584 CVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSIL 618


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 184/612 (30%), Positives = 316/612 (51%), Gaps = 2/612 (0%)

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           ++KGY      +S L     M     +   +  + +L+ C    D   G++IH   I SG
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F  N+F  T +++MY       +A N+F  +  +D+ C N MI  Y + G +++A  + +
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +      P+  T  +++    +   +  G  +HG  ++ G    ++V  A+V MY K G
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A  +FD +  R ++SW ++I GYV+SG    A+  F + LD G+   +  +   + 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+   +LE G  +H    +    SDV +  +L+ +Y+K   +  A  +      K    
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA++ G+ +    +E   +  F + +   ++PD  T   ++   A  +   + + +H  
Sbjct: 301 WNAMILGYAQNGCVNE--ALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            I+     +V V  AL+ MYAKCG+I  A ++F  ++ R +++WNAM+  Y  HGLGK +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           + LF+EMK+    P+DI+ L  L AC +SGL E G+C F  +++ YG+ P ++H+  MVD
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGRAGRL++A + I   P      ++  ++   K+  N      A+  +  L P D G 
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGY 538

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
            +L++N+YA   M  + AKVRT M    L K  GCS +EI +++H F +    HP+S++I
Sbjct: 539 HVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKI 598

Query: 730 YSKLDLLNDEMK 741
           YS L+ L DE++
Sbjct: 599 YSYLETLVDEIR 610



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 271/556 (48%), Gaps = 22/556 (3%)

Query: 52  SERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV 111
           S R +++N +  L+K+   + DLK G+ +H  ++ SG   + F    ++N+YAK  +++ 
Sbjct: 25  SVRPVVYN-FTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQIND 83

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           A  +FD M  R  + W ++I GY  +G  +  L +   M     + +  T   IL A + 
Sbjct: 84  AYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVAD 143

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
                 G  +H + +++GFE+ V V T+L+ MY   G    A  +F G+ ++ V   N M
Sbjct: 144 TRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSM 203

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           I  Y ++G++E A  +F  +L    +P + T    +  C +   +E GK +H L  +  +
Sbjct: 204 IDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKL 263

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
             ++SV N++++MY K    + A  +F  +  + L+SW A+I GY ++G   +A+N F E
Sbjct: 264 DSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCE 323

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
                I  DS  + +VI   +  S       +HG  I+     +V + TALVD+YAK G 
Sbjct: 324 MQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGA 383

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           + +AR L D  + ++   +NA++ G+           + LF + +   ++P+ +TF  L 
Sbjct: 384 IHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS--VELFKEMKKGTIKPNDITF--LC 439

Query: 472 SLSA-SQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR 528
           +LSA S + LV        S+K  Y  +  + +  A++ +  + G ++ A+   + +  +
Sbjct: 440 ALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIK 499

Query: 529 D-IVSWNAMLSAYALH-GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
             I  + AML A  +H  +  G    FE  K     PDD     VL A IY+  S  G  
Sbjct: 500 PGITVYGAMLGACKIHKNVDLGEKAAFEIFK---LNPDD-GGYHVLLANIYATASMWG-- 553

Query: 587 LFNEIEQIYGLRPILE 602
                 ++  +R I+E
Sbjct: 554 ------KVAKVRTIME 563


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 195/664 (29%), Positives = 339/664 (51%), Gaps = 7/664 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K+     +++ G+ VH    K G   D F  N L+  Y        A K+FD M 
Sbjct: 140 YPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMP 199

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI--LEACSLLEDRIFG 178
            R  ++W ++I      G YE  LG    M  ++        +V+  L  C+  ED++  
Sbjct: 200 ERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMA 259

Query: 179 EQIHAFAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             +H +A+K G    +V VG +L+ +Y   G  + ++ VF  +  ++V   N +I  ++ 
Sbjct: 260 RIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSF 319

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G+   A  VF  ++     PN  T ++++ V  E    + G ++HG ++K  +  ++ +
Sbjct: 320 RGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFI 379

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N+++ MY K G S  A  +F+ +  RN++SW A+I+ + R+    +A+    +    G 
Sbjct: 380 SNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGE 439

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             ++     V+  C+    L +G ++H   I+ G   D+ +  AL D+Y+K G L  A+ 
Sbjct: 440 TPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQN 499

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +  S +    +N ++ G+     +D  + + LFS+ RL GM PD V+F  ++S  A+ 
Sbjct: 500 VFN-ISVRDEVSYNILIIGYSR--TNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANL 556

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A + +G+ +H   ++  +   + V N+L+ +Y +CG ID A ++F  I ++D+ SWN M+
Sbjct: 557 AFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMI 616

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             Y + G    A+ LFE MK +G   D +S + VL AC + GL E G   F  +  +  +
Sbjct: 617 LGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDL-NI 675

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P   H+ACMVDLLGRAG + EA +LI          +W  L+   ++  N +  + A++
Sbjct: 676 EPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAE 735

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            L +L+P+  G +IL+SNMYA     DEA KVR  M      K  GCSW+++   +H F+
Sbjct: 736 HLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAFL 795

Query: 718 ASGK 721
              K
Sbjct: 796 VGEK 799



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 184/650 (28%), Positives = 317/650 (48%), Gaps = 25/650 (3%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYAKFNRLDVAQKLFDGML 120
           P L+++      L   + VHA+ L  G    +     +LI  YA F     +  LF   +
Sbjct: 38  PNLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSV 97

Query: 121 V--RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
              RSA  W +LI+     G ++   G    M R+  K +E T   +L+ CS   +   G
Sbjct: 98  AYSRSAFLWNTLIRANSIAGVFDG-FGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKG 156

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            ++H  A K GF+ +VFVG +L++ Y + G F +A  VF  +  +D    N +I   +  
Sbjct: 157 REVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLH 216

Query: 239 GESEMAFHVFVHLLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REI 295
           G  E A   F  ++++    +P+  T  +V+ VC E       + +H  A+K G++   +
Sbjct: 217 GFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHV 276

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VGNA+V +YGK G  + ++++FD I ERN+ISW A+I+ +   G    A++ F   +D 
Sbjct: 277 KVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDE 336

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  +S  +++++         +LG+++HGF++K    SDV +  +L+D+YAK G  + A
Sbjct: 337 GMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIA 396

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             + +    +    +NA+++ F       E + + L  Q +  G  P+ VTF+ +L   A
Sbjct: 397 STIFNKMGVRNIVSWNAMIANFARNRL--EYEAVELVRQMQAKGETPNNVTFTNVLPACA 454

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
               L  G+ +HA  I+ G + D+ V NAL  MY+KCG ++ A  +F  IS RD VS+N 
Sbjct: 455 RLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNI 513

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ++  Y+       +L LF EM+  G  PD +S +GV+ AC         +    + ++I+
Sbjct: 514 LIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSAC-------ANLAFIRQGKEIH 566

Query: 596 GL--RPILE-HF---ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
           GL  R +   H      ++DL  R GR+  A  +      ++    W T++    +    
Sbjct: 567 GLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQ-NKDVASWNTMILGYGMRGEL 625

Query: 650 KFSI-LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
             +I L      D    D+ SF+ V +  +  G++++  K    M DL +
Sbjct: 626 DTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNI 675


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 200/679 (29%), Positives = 338/679 (49%), Gaps = 41/679 (6%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           + SG L   +A    +       + F  N +++ Y+    L  AQ LF     R+A TWT
Sbjct: 268 LSSGHLHRARA----MFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWT 323

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE--ACSLLEDRIFGEQIHAFAI 186
            +++ +   G     L +   M       +  T + +L    C++         +H FAI
Sbjct: 324 IMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAI 376

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K G + +VFV  +L+  Y   G    A  VF  +  KD    N M++  +K G    A  
Sbjct: 377 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 436

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV-----GNAI 301
           +F  +  + +  +                      LH L       R  SV      N++
Sbjct: 437 LFAAMRRAGYSRH---------------------PLHLLQYSHSRSRSTSVLNVFVNNSL 475

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           +  Y K    ++  R+FD + ER+ +S+  +I+ Y  +      +  F E   LG     
Sbjct: 476 LDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQV 535

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
              AT++       ++ +G Q+H   +  G  S+  LG AL+D+Y+K G L +A+     
Sbjct: 536 LPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSN 595

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            S K    + A+++G+++      E+ + LFS  R AG+ PD  TFS ++  S+S A + 
Sbjct: 596 RSEKSAISWTALITGYVQN--GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 653

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            GR LH+Y I++GY + V  G+ L+ MYAKCG +D A + F  + +R+ +SWNA++SAYA
Sbjct: 654 LGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYA 713

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            +G  K A+ +FE M   GF PD ++ L VL AC ++GL++  +  F+ ++  Y + P  
Sbjct: 714 HYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWK 773

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           EH+AC++D LGR G  S+   ++   PF   P++W +++   ++  N + + +A+ +L  
Sbjct: 774 EHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFG 833

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           +EP DA  ++++SN+YA  G  ++AA V+  M D  + KE+G SW+EI  K++ F ++  
Sbjct: 834 MEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDL 893

Query: 722 DHPESEEIYSKLDLLNDEM 740
             P  +EI  +LD L  EM
Sbjct: 894 TSPMIDEIKDELDRLYKEM 912



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 12/221 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K S     + LG+ +H++L++SG ++  F  + L+++YAK   LD A + FD M  R+
Sbjct: 642 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 701

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL--LED---RIFG 178
           +I+W ++I  Y   G+ ++ + +   M       +  T   +L ACS   L D   + F 
Sbjct: 702 SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFH 761

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK- 237
              H ++I    E+   V  +L  +    GCF + + +   + +K    +   IL   + 
Sbjct: 762 LMKHQYSISPWKEHYACVIDTLGRV----GCFSQVQKMLVEMPFKADPIIWTSILHSCRI 817

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            G  E+A      L     EP D T   ++S  Y   G  E
Sbjct: 818 HGNQELARVAADKLFG--MEPTDATPYVILSNIYARAGQWE 856


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 201/719 (27%), Positives = 361/719 (50%), Gaps = 11/719 (1%)

Query: 30  NTFSPNPKSQVAYLCSISSV-------SCSERTLL-FNDWPQLVKISIGSGDLKLGQAVH 81
           N  + +  +++   C +  +       S S+R+ L  N +  ++++      L+ G+ VH
Sbjct: 21  NNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKRVH 80

Query: 82  AFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYE 141
           + +  +G   D      L+ +Y     L   +++FDG+L      W  L+  Y   G+Y 
Sbjct: 81  SIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYR 140

Query: 142 SVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI 201
             +G+   M     + + +T + +L+  +        +++H + +K GF +   V  SLI
Sbjct: 141 ESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLI 200

Query: 202 SMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY 261
           + YF  G    A  +F  L+ +DV   N MI      G S      F+ +L+   + +  
Sbjct: 201 AAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSA 260

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           T  NV+  C     +  G+ LH   VK G    +   N ++ MY K G    A  +F  +
Sbjct: 261 TLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKM 320

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
            E  ++SWT++I+ +VR G   +AI  F E    G+  D   + +V+  C+  ++L+ G 
Sbjct: 321 GETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGR 380

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           ++H    K+   S++ +  AL+++YAK G ++ A ++      K    +N ++ G+ +  
Sbjct: 381 EVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNS 440

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
             +E   + L  Q++L   +PD VT + +L   A  A L +GR +H + ++ GY +D+ V
Sbjct: 441 LPNEALQLFLDMQKQL---KPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHV 497

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
             AL+ MY KCG +  A Q+F  I  +D++ W  M++ Y +HG GK A+  FE+M+  G 
Sbjct: 498 ACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGI 557

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            P++ S   +L AC +SGL + G  LF+ ++    + P LEH+ACMVDLL R+G LS A 
Sbjct: 558 EPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAY 617

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
             I + P      +W  L+S  ++  + + +   ++ + +LEP++   ++L++N+YA   
Sbjct: 618 KFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAE 677

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
             +E  K++  ++   L  + GCSWIE+  K + F A    HP+++ I S L  L  +M
Sbjct: 678 KWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKM 736


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 189/600 (31%), Positives = 320/600 (53%), Gaps = 6/600 (1%)

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           +A  W +LI+GY   G     L +   M R   + ++HT   +L+AC+   +   G ++H
Sbjct: 6   TAFLWNTLIRGYSIAG-VGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVH 64

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG-ES 241
              +K GFE++VFVG +L+S Y + G  R+A  VF  +  KD+   N MI  ++  G   
Sbjct: 65  GSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHY 124

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A  +F  ++    +PN  T ++ + V  E    + G+++HG +++ G+  +I + N++
Sbjct: 125 RDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSL 184

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K G S EA  +F  +  +N++SW A+I+ + ++     A+    +  D G   +S
Sbjct: 185 IDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNS 244

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                V+  C+    +  G ++H  +I  G   D+ +  AL D+YAK G LK AR + D 
Sbjct: 245 VTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT 304

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            S +    +N ++ G  +    D  + + LFS+ +L G++ D V+F   LS  A+   + 
Sbjct: 305 -SLRDEVSYNILIVGHSQ--TSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIK 361

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           +G+ +H + ++  +   + V N+L+  Y KCG I  A  IF  ++++D+ SWN M+  Y 
Sbjct: 362 QGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYG 421

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
           + G    A+ LFE M+++    D +S + VL AC + GL E G   F+E+ +  G+ P  
Sbjct: 422 MLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDEL-KARGIEPTQ 480

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
            H+ACMVDLLGRAG + EA  LI   P      +W  L+   ++  N + +  A++ L +
Sbjct: 481 MHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFE 540

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           L+P+ +G + L+SNMYA  G  DEA ++R  M    + K  GCSW++I  + H FV   K
Sbjct: 541 LKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVGEK 600



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 234/488 (47%), Gaps = 9/488 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K    + +++ G+ VH  ++K G ++D F  N L++ Y     L  A ++FD M 
Sbjct: 44  FPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMP 103

Query: 121 VRSAITWTSLIKGYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            +  ++W ++I  +  +G  Y   L +   M     K N  T S  L     LE    G 
Sbjct: 104 EKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGR 163

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           ++H  +I+ G E+++F+  SLI MY  SG   EA NVF  L  K+V   N MI  + +  
Sbjct: 164 EVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNR 223

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
              +A  +   +      PN  TFTNV+  C     V  GK++H  ++  G   ++ V N
Sbjct: 224 FELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSN 283

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+  MY K G  + A  +FD  S R+ +S+  LI G+ ++    ++++ F E   +G+  
Sbjct: 284 ALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQ 342

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D+      +  C+  + ++ G ++HGF ++  +   + +  +L+D Y K G +  AR + 
Sbjct: 343 DNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIF 402

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D  + K  A +N ++ G+   +  + +  + LF   R   +E D V+F  +LS  +    
Sbjct: 403 DRMTNKDVASWNTMILGY--GMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGL 460

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG---ISDRDIVSWNAM 536
           L +GR         G     +    ++ +  + G ++ A ++ KG   + D +I  W A+
Sbjct: 461 LEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANI--WGAL 518

Query: 537 LSAYALHG 544
           L A  ++G
Sbjct: 519 LGACRIYG 526



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 184/411 (44%), Gaps = 8/411 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P LV++       K G+ VH   ++ G ++D F AN+LI++YAK      A  +F  +  
Sbjct: 151 PVLVELEF----FKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDA 206

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           ++ ++W ++I  +  +      +G+   M    E  N  T + +L AC+ +     G++I
Sbjct: 207 KNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEI 266

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA +I  G   ++FV  +L  MY  SG  + A NVF   + +D    N +I+ +++  + 
Sbjct: 267 HARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVF-DTSLRDEVSYNILIVGHSQTSDC 325

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             +  +F  +     + ++ +F   +S C     +++GK++HG  ++      + V N++
Sbjct: 326 SESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSL 385

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           +  Y K G    A  +FD ++ +++ SW  +I GY   G    AI+ F       +  DS
Sbjct: 386 LDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDS 445

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                V+  CS    LE G +        G          +VD+  + G ++ A  L+ G
Sbjct: 446 VSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKG 505

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
                 A     L G      + E   +  ++ + L  ++P+   +  LLS
Sbjct: 506 LPIVPDANIWGALLGACRIYGNLE---LAAWAAEHLFELKPEHSGYYTLLS 553


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 198/649 (30%), Positives = 338/649 (52%), Gaps = 17/649 (2%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y K   +  A  +F  +   ++++WT ++  +  +G Y   LG    M     + +   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRGL 220
             V +  CS  +D   G+ +HA  +++   E ++ +GT+LI+MY        A   F  +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE---PNDYTFTNVISVCYENLGVE 277
             K +   N +I  Y++ G+   A  ++  ++S   E   P+  TF++ +  C     + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           +G+++    V  G   +  V NA++ MY K G  E A ++FD +  R++I+W  +ISGY 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE---LGLQLHGFAIKHGYLS 394
           + G   +A+  F     +G       + T I   + C+NLE    G  +H    +HGY S
Sbjct: 241 KQGAATQALELFQR---MGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYES 297

Query: 395 DVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           D+ +G  L+++Y K    L+ AR + +    +    +N ++  +++      +D + +F 
Sbjct: 298 DLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQY--GQAKDALDIFK 355

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           Q +L  + P+ +T S +LS  A      +G+++HA        ADV++ N+L+ MY +CG
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCG 415

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           S+D    +F  I D+ +VSW+ +++AYA HG  +  L  F E+ +EG A DD++++  L 
Sbjct: 416 SLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLS 475

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC + G+ + G+  F  +   +GL P   HF CMVDLL RAGRL  A NLI+  PF    
Sbjct: 476 ACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDA 535

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI-LVSNMYAGQGMLDEAAKVRTT 692
           + W +L+S  KL  ++K +   + +L +LE +D  S + L+SN+YA  G  D+   VR T
Sbjct: 536 VAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKT 592

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            N     K  GCS+IEI+  +H FVA  K HPE E I +++  L+ +MK
Sbjct: 593 RNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMK 641



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 234/493 (47%), Gaps = 9/493 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           S DLK GQ +HA +L++   + D      LI +YA+   L++A+K FD M  ++ +TW +
Sbjct: 71  SKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNA 130

Query: 130 LIKGYLDDGDYESVLGIACDMY-RSEE--KFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           LI GY  +GD+   L I  DM  +S E  K +  T S  L ACS++ D   G +I A  +
Sbjct: 131 LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTV 190

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
            SG+ ++  V  +LI+MY   G    A  VF  L  +DV   N MI  Y K G +  A  
Sbjct: 191 ASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALE 250

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F  +  +D +PN  TF  +++ C     +E+G+ +H    + G   ++ +GN ++ MY 
Sbjct: 251 LFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYT 310

Query: 307 KHGMS-EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
           K   S EEA ++F+ +  R++I+W  LI  YV+ G    A++ F +     +  +   L+
Sbjct: 311 KCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLS 370

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            V+  C+V      G  +H         +DV L  +L+++Y + G L     +      K
Sbjct: 371 NVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDK 430

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-R 484
               ++ +++ + +         +  F +    G+  D VT    LS  +    L  G +
Sbjct: 431 SLVSWSTLIAAYAQH--GHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQ 488

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           S  +     G A D      ++ + ++ G ++ A  +   +    D V+W ++LS   LH
Sbjct: 489 SFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLH 548

Query: 544 GLGKGALLLFEEM 556
              K A  + +++
Sbjct: 549 NDTKRAARVADKL 561


>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
 gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 168/491 (34%), Positives = 290/491 (59%), Gaps = 3/491 (0%)

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           +++  C +N     GK  HG  ++ G+  +    N ++ MY K G+   A ++FD I ER
Sbjct: 3   SLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPER 62

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           +++SW  +I   V++G   KAI+ FLE    G  C    +++V+  C+   ++    QLH
Sbjct: 63  SMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLH 122

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
            FAIK    +DV +GTAL+D+YAK G ++ A  + +G   +    +++I++GF++   + 
Sbjct: 123 AFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQN--EL 180

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
            E+ +VLF++ +  G+E +    S ++   A  A L+ GR +HA   +TG+  +  V +A
Sbjct: 181 YEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASA 240

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           L+ MYAKCGSI+ A+ +F  I  +++V WNA++S +A H      + LFEEM++ G  PD
Sbjct: 241 LVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPD 300

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
           +++ + VL AC++ GL + G   F+ + + + + P + H++CMVD+LGR G + EA  L+
Sbjct: 301 EVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELM 360

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
              PF+ +  +W +L++  ++  N + + +A+K L ++EP   G+++L++N YA     +
Sbjct: 361 TKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKWE 420

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM-KLK 743
           EAAK R ++    + KE G SWIEI  K+H F+A  + HP   +IY +L+ L +EM KL 
Sbjct: 421 EAAKARKSLKGSEILKERGKSWIEIKDKVHTFMAGERTHPRITDIYLELNNLLEEMTKLV 480

Query: 744 VKDSSAFELQD 754
            K  + F+L D
Sbjct: 481 NKAETDFDLHD 491



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 171/353 (48%), Gaps = 1/353 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+A H  +++ G + DT  +N L+N+Y+K   +  A K+FD +  RS ++W  +I   + 
Sbjct: 17  GKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQ 76

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G+ E  + I  +M R     +E T S ++ AC+   D  F  Q+HAFAIK+  + +VFV
Sbjct: 77  NGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFV 136

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GT+LI +Y   G   +A  VF G+  ++    + ++  + +    E    +F        
Sbjct: 137 GTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGL 196

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E N +  ++VI  C     + EG+Q+H +  + G      V +A+V MY K G  EEA  
Sbjct: 197 ENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYV 256

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  I ++N++ W A+ISG+ +     + +N F E    G+  D      V+  C     
Sbjct: 257 LFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGL 316

Query: 377 LELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           ++ G        + H    +V   + +VDI  +GG +  A  L+       TA
Sbjct: 317 VDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATA 369



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 193/382 (50%), Gaps = 4/382 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ C+   + I G+  H   I+ G E +      L++MY   G  R A  VF  +  + 
Sbjct: 4   LLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERS 63

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +   N MI    + GE E A  +F+ +       +++T ++V+  C     V   +QLH 
Sbjct: 64  MVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHA 123

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            A+K  V  ++ VG A++ +Y K G  E+A  +F+ + ERN ++W+++++G+V++    +
Sbjct: 124 FAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEE 183

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
            +  F    ++G+  +   +++VI  C+  + L  G Q+H    + G+  +  + +ALVD
Sbjct: 184 GLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVD 243

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +YAK G ++ A +L      K    +NAI+SGF +     E  VM LF + +  GM+PD 
Sbjct: 244 MYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSE--VMNLFEEMQQTGMQPDE 301

Query: 465 VTFSRLLSLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           VT+  +LS       + +GRS     + +   + +V+  + ++ +  + G +  A ++  
Sbjct: 302 VTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMT 361

Query: 524 GISDRDIVS-WNAMLSAYALHG 544
            +      S W ++L++  +HG
Sbjct: 362 KMPFAATASMWGSLLASCRIHG 383



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 51  CSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD 110
           CSE T+       +V      GD+   + +HAF +K+    D F    LI++YAK   ++
Sbjct: 97  CSEFTV-----SSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIE 151

Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
            A  +F+GM  R+ +TW+S++ G++ +  YE  L +         + N+   S ++ AC+
Sbjct: 152 DASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRACA 211

Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
            L   I G Q+HA   ++GF  N FV ++L+ MY   G   EA  +F  +  K+V   N 
Sbjct: 212 GLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNA 271

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-F 289
           +I  + K   S    ++F  +  +  +P++ T+  V+S C     V++G+    L  +  
Sbjct: 272 IISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREH 331

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMF 318
            V   +   + +V + G+ G+  EA  + 
Sbjct: 332 NVSPNVLHYSCMVDILGRGGLVHEAHELM 360


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 204/635 (32%), Positives = 357/635 (56%), Gaps = 9/635 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA L+ SG  +    +  L+  YA    +  A+KLFD +  R  + +  +IK Y+  
Sbjct: 41  KQLHAHLITSGLLSIDIRSV-LVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAK 99

Query: 138 GDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           GDY   + +  +M  S++   + +T   +++ACS L    +G  +H   + S F +++FV
Sbjct: 100 GDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFV 159

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SL++MY + G   EA  VF  +  K V   N MI  Y K G +  A  VF  ++ S  
Sbjct: 160 LNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGV 219

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E +  +  +V+  C     +E G+++HGL V+  V+ +  V NA+V MY K G  +EA  
Sbjct: 220 EIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVSNALVDMYAKCGSMDEARL 278

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD + ER+++SWT++I+GY+ +G    A++ F      G+  +S  +A ++  C+  +N
Sbjct: 279 VFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNN 338

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L+ G  LHG+ +K    S+V + T+L+D+YAK   L  +  +    S K T  +NA+LSG
Sbjct: 339 LKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSG 398

Query: 437 FME-KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
            +  K+A    + + LF +  + G+E +  T + LL      A L    ++++Y +++G+
Sbjct: 399 CVHNKLA---TEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGF 455

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISD--RDIVSWNAMLSAYALHGLGKGALLLF 553
            +++ V  +LI +Y+KCGS++ A +IF  I    +DI  W+ +++ Y +HG G+ A+ LF
Sbjct: 456 VSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLF 515

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           ++M + G  P+D++   VLQ+C ++G+ + G+ LF  + + +   P  +H+ CMVDLLGR
Sbjct: 516 KQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGR 575

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AGR+ EA +LI + PF     +W  L+    +  N +   +A++ L +LEP + G+++L+
Sbjct: 576 AGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLL 635

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           + +YA  G  ++A  VR  M+D+ L K    S IE
Sbjct: 636 AKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIE 670



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 229/479 (47%), Gaps = 17/479 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++ G+ +H   L S   +  F  N+L+ +Y     ++ A+K+FD M  +S ++W ++I G
Sbjct: 138 VEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMING 197

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G   + L +   M  S  + +  +   +L AC  L++   G ++H   ++      
Sbjct: 198 YFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGK 256

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             V  +L+ MY   G   EA  VF  +  +DV     MI  Y   G+++ A  +F  +  
Sbjct: 257 KIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQI 316

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               PN  T   ++  C     +++G+ LHG  +K  +  E++V  +++ MY K      
Sbjct: 317 EGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGL 376

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           +  +F   S +  + W AL+SG V +    +AI  F + L  G+  +++   +++    +
Sbjct: 377 SFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGI 436

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF--N 431
            ++L+    ++ + ++ G++S++++ T+L+DIY+K G L+SA  + +         F  +
Sbjct: 437 LADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWS 496

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSLHAYS 490
            I++G+   +    E  + LF Q   +G++P+ VTF+ +L  S S A +V  G  L  + 
Sbjct: 497 IIIAGY--GMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQ-SCSHAGMVDDGLYLFKFM 553

Query: 491 IKTGYAADVIVGN-----ALITMYAKCGSIDGAFQIFKGISDRD-IVSWNAMLSAYALH 543
           +K        + N      ++ +  + G +D A+ + K +        W A+L A  +H
Sbjct: 554 LKDHQT----IPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMH 608



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 18/276 (6%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +LK G+ +H +++K    ++     +LI++YAK N L ++  +F     +  + W +L+ 
Sbjct: 338 NLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLS 397

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G + +      +G+   M     + N  TC+ +L A  +L D      I+++ ++SGF +
Sbjct: 398 GCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVS 457

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLA--YKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           N+ V TSLI +Y   G    A  +F  +    +D+   + +I  Y   G  E A  +F  
Sbjct: 458 NIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQ 517

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN-----AIVTMY 305
           ++ S  +PND TFT+V+  C     V++G  L     KF +    ++ N      +V + 
Sbjct: 518 MVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYL----FKFMLKDHQTIPNDDHYTCMVDLL 573

Query: 306 GKHGMSEEAERMFDAISERNLIS----WTALISGYV 337
           G+ G  +EA   +D I     +     W AL+   V
Sbjct: 574 GRAGRMDEA---YDLIKTMPFMPGHAVWGALLGACV 606


>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
 gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
          Length = 749

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 206/675 (30%), Positives = 360/675 (53%), Gaps = 11/675 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VRSAITWTSLIKGYL 135
           G+++HA L+K G  + T   N+++  Y +    D+A  +F+ M   R +++W  LI G+L
Sbjct: 66  GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHL 125

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           D+G   + L    +   +  + N  T  ++++AC +L  +  G  +H + IKSGF     
Sbjct: 126 DNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISS 185

Query: 196 VGTSLISMYFHSG--CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL-L 252
           V  SL+SMY  +   C RE   +F  +  KDV   + MI  Y +  E ++   +F  + L
Sbjct: 186 VQNSLLSMYVDADMECARE---LFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               EP+     +V+  C  +  V  G+ +HGL +  G   ++ V N+++ MY K   + 
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A ++F+ IS+RN +SW +++SG+V + +  +A +         +  D   L  ++  C 
Sbjct: 303 SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICK 362

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +      +H   I+ G  ++  + +AL+D YAK   ++ A  +      +    ++ 
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWST 422

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++SGF      DE   + ++ +     ++P+ +T   LL   +  A L R +  H  +I+
Sbjct: 423 MISGFAHCGKPDE--AIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIR 480

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G+A++V VG A++ MY+KCG I  + + F  ++ ++IV+W+AM++AY ++GL   AL L
Sbjct: 481 QGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALAL 540

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F EMKR G  P+ ++ L VL AC + GL E G+ LF  + Q  GL P  EH++CMVD+LG
Sbjct: 541 FAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLG 600

Query: 613 RAGRLSEAMNLINSSP--FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           RAG+L  A+ +I + P        +W +L+S  +    ++    A  R+L+LEP ++  +
Sbjct: 601 RAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGY 660

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           ++ S+MYA  G+ D+AA++R    +  +   AG S + ID+K   FVA    HP S+EI+
Sbjct: 661 LVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIF 720

Query: 731 SKLDLLNDEMKLKVK 745
           S    L+D +K+  K
Sbjct: 721 SMAQQLHDCIKIDEK 735



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 168/353 (47%), Gaps = 1/353 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    S D+  G+ VH  ++  G   D F  N+LI++Y+K      A K+F+ +  R+
Sbjct: 256 VLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRN 315

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W S++ G++ + +Y     +   M +   + +E T   IL+ C         + IH 
Sbjct: 316 NVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHC 375

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+ G E N  V ++LI  Y        A  VF  +  +DV   + MI  +   G+ + 
Sbjct: 376 VMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDE 435

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  V+  +     +PN  T  N++  C     ++  K  HG+A++ G   E++VG A+V 
Sbjct: 436 AIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVD 495

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G    + R FD ++ +N+++W+A+I+ Y  +G   +A+  F E    G+  +   
Sbjct: 496 MYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVT 555

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKH-GYLSDVRLGTALVDIYAKGGDLKSA 415
             +V+  CS    +E GL L    ++  G        + +VD+  + G L +A
Sbjct: 556 TLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTA 608



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 155/306 (50%), Gaps = 5/306 (1%)

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE-RNLISWTAL 332
           L    GK LH   +K G     S+GN+I+  Y + G  + A  +F+++   R+ +SW  L
Sbjct: 61  LSHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNIL 120

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           I G++ +G     +  F      G   + S +  VI  C +      GL LHG+ IK G+
Sbjct: 121 IHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGF 180

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
            +   +  +L+ +Y    D++ AR L D    K    ++ ++ G+++   ++ +  + +F
Sbjct: 181 WAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQ--WEEPQVGLQMF 237

Query: 453 SQQRLA-GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
            +  L  G+EPD V    +L   AS   +  GR +H   I  G+  D+ V N+LI MY+K
Sbjct: 238 RKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSK 297

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           C     AF++F  IS R+ VSWN+MLS + L+     A  L   M++E    D+++++ +
Sbjct: 298 CKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNI 357

Query: 572 LQACIY 577
           LQ C Y
Sbjct: 358 LQICKY 363


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 210/727 (28%), Positives = 358/727 (49%), Gaps = 21/727 (2%)

Query: 35  NPKSQVAYLCSISSVSCSERTLLF-------------NDWPQLVKISIGSGDLKLGQAVH 81
           N  S  A + ++SS  C E  L+              N    +V +     D   G  V 
Sbjct: 109 NVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVT 168

Query: 82  AFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYE 141
           A ++ SG       AN+LI ++    R+  A++LFD M  R  I+W ++I  Y  +  Y 
Sbjct: 169 AHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYS 228

Query: 142 SVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI 201
               +  DM   E K +  T   ++  C+  +    G  IH+  + SG   +V +  +L+
Sbjct: 229 KCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALV 288

Query: 202 SMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD-FEPND 260
           +MY  +G   EAE++FR ++ +DV   N MI  Y ++     A      LL +D   PN 
Sbjct: 289 NMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNS 348

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
            TF++ +  C     +  G+ +H + ++  +   + +GN+++TMY K    E+ ER+F++
Sbjct: 349 MTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFES 408

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE-L 379
           +   +++S   L  GY        A+  F      GI  +   +  +   C    +L   
Sbjct: 409 MPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSY 468

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G+ LH +  + G LSD  +  +L+ +YA  GDL+S+  +    + K    +NAI++  + 
Sbjct: 469 GMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVR 528

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
                 E+ + LF   + AG + D    +  LS SA+ A L  G  LH  S+K G   D 
Sbjct: 529 H--GRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDS 586

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            V NA + MY KCG +D   +     + R    WN ++S YA +G  K A   F+ M   
Sbjct: 587 HVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSV 646

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
           G  PD ++ + +L AC ++GL + G+  +N +   +G+ P ++H  C+VDLLGR G+ +E
Sbjct: 647 GQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAE 706

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
           A   I+  P   + L+WR+L+S S+   N      A+K LL+L+P D  +++L+SN+YA 
Sbjct: 707 AEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYAT 766

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE 739
                +  K+R+ M  ++L+K   CSW+++ +++  F    + H  +E+IY KL    DE
Sbjct: 767 NARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKL----DE 822

Query: 740 MKLKVKD 746
           + LK+++
Sbjct: 823 ILLKLRE 829



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/575 (26%), Positives = 269/575 (46%), Gaps = 22/575 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G A+HA   ++G   + +    L++LY     +  AQ+LF  M  R+ ++WT+++     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  E  L     M +     N +  + ++  C  LED + G Q+ A  + SG   +V V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLI+M+ +    ++AE +F  +  +D    N MI  Y+        F V   +   + 
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +P+  T  +++SVC  +  V  G  +H L V  G+   + + NA+V MY   G  +EAE 
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL--DLGICCDSSCLATVIDGCSVC 374
           +F  +S R++ISW  +IS YV+S    +A+    + L  D G   +S   ++ +  CS  
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGP-PNSMTFSSALGACSSP 361

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
             L  G  +H   ++    + + +G +L+ +Y+K   ++    + +   C      N + 
Sbjct: 362 EALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLT 421

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL-VRGRSLHAYSIKT 493
            G+     +D  + M +FS  R  G++P+ +T   L     S   L   G  LHAY  +T
Sbjct: 422 GGY--AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQT 479

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G  +D  + N+LITMYA CG ++ +  IF  I+++ ++SWNA+++A   HG G+ A+ LF
Sbjct: 480 GLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLF 539

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC------- 606
            + +  G   D   +   L        S   +    E  Q++GL  +     C       
Sbjct: 540 MDSQHAGNKLDRFCLAECLS-------SSANLASLEEGMQLHGL-SVKNGLDCDSHVVNA 591

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            +D+ G+ G++   +  +   P       W TL+S
Sbjct: 592 TMDMYGKCGKMDCMLKTL-PDPAHRPTQCWNTLIS 625



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 171/344 (49%), Gaps = 8/344 (2%)

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ----LHGLAVKFGVV 292
           + G    AF +   +   D   + +   ++++ C E+ G +EG      +H L  + G++
Sbjct: 18  RCGLESTAFTLLRVMRERDVPLSGFALASLVTAC-EHRGWQEGAACGAAIHALTHRAGLM 76

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
             + +G A++ +YG  G+   A+R+F  + +RN++SWTA++     +G   +A+  +   
Sbjct: 77  GNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRM 136

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
              G+ C+++ LATV+  C    +   GLQ+    +  G L+ V +  +L+ ++     +
Sbjct: 137 RKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRV 196

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           + A  L D    +    +NA++S +  +  +      ++ S  R   ++PD  T   L+S
Sbjct: 197 QDAERLFDRMEERDRISWNAMISMYSHE--EVYSKCFIVLSDMRHGEVKPDVTTLCSLVS 254

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
           + AS   +  G  +H+  + +G    V + NAL+ MY+  G +D A  +F+ +S RD++S
Sbjct: 255 VCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVIS 314

Query: 533 WNAMLSAYALHGLGKGAL-LLFEEMKREGFAPDDISILGVLQAC 575
           WN M+S+Y        AL  L + ++ +   P+ ++    L AC
Sbjct: 315 WNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 203/676 (30%), Positives = 349/676 (51%), Gaps = 30/676 (4%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           AN L+  YA+   L  A  LF+ M  R A+T+ SLI        +   L    DM     
Sbjct: 99  ANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGH 158

Query: 156 KFNEHTCSVILEACS-LLEDRIFGEQIHAFAIKSGF--ENNVFVGTSLISMYFHSGCFRE 212
             +  T   +L ACS L ED   G + HAFA+K+GF   +  F   +L+SMY   G   +
Sbjct: 159 PLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDD 218

Query: 213 AENVFRGLAYKD-----VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
           A+ +F  +   D     V   N M+    ++G    A  V   +++    P+  TF + +
Sbjct: 219 AQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASAL 278

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAIS--ER 324
             C +   +  G+++H   +K   +   S V +A+V MY  H     A R+FD +    R
Sbjct: 279 PACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHR 338

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
            L  W A++ GY ++G   +A+  F     + G+    + +A V+  C+          +
Sbjct: 339 QLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAV 398

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK--I 441
           HG+ +K G   +  +  AL+D+YA+ GD+++AR +      +    +N +++G + +  I
Sbjct: 399 HGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHI 458

Query: 442 ADDEEDVMVLFSQQR---------LAGMEPDPV-----TFSRLLSLSASQACLVRGRSLH 487
            D  + V  +  Q R         +AG + +PV     T   LL   A  A   +G+ +H
Sbjct: 459 HDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIH 518

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            Y+++    +D+ VG+AL+ MYAKCG +  +  +F  +  R++++WN ++ AY +HGLG 
Sbjct: 519 GYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGD 578

Query: 548 GALLLFEEMKREGFA-PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
            A+ LF+ M     A P++++ +  L AC +SG+ + G+ LF+ +++ +G++P  +  AC
Sbjct: 579 EAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHAC 638

Query: 607 MVDLLGRAGRLSEAMNLINS-SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
            VD+LGRAGRL EA ++I S  P  +    W + +   +L  N     +A++RL  LEP 
Sbjct: 639 AVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPD 698

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           +A  ++L+ N+Y+  G+ +++++VR  M    +SKE GCSWIE+D  +H F+A    HPE
Sbjct: 699 EASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPE 758

Query: 726 SEEIYSKLDLLNDEMK 741
           S  +++ +D L + M+
Sbjct: 759 STLVHAHMDALWERMR 774


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 210/727 (28%), Positives = 358/727 (49%), Gaps = 21/727 (2%)

Query: 35  NPKSQVAYLCSISSVSCSERTLLF-------------NDWPQLVKISIGSGDLKLGQAVH 81
           N  S  A + ++SS  C E  L+              N    +V +     D   G  V 
Sbjct: 109 NVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVT 168

Query: 82  AFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYE 141
           A ++ SG       AN+LI ++    R+  A++LFD M  R  I+W ++I  Y  +  Y 
Sbjct: 169 AHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYS 228

Query: 142 SVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI 201
               +  DM   E K +  T   ++  C+  +    G  IH+  + SG   +V +  +L+
Sbjct: 229 KCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALV 288

Query: 202 SMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD-FEPND 260
           +MY  +G   EAE++FR ++ +DV   N MI  Y ++     A      LL +D   PN 
Sbjct: 289 NMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNS 348

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
            TF++ +  C     +  G+ +H + ++  +   + +GN+++TMY K    E+ ER+F++
Sbjct: 349 MTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFES 408

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE-L 379
           +   +++S   L  GY        A+  F      GI  +   +  +   C    +L   
Sbjct: 409 MPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSY 468

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G+ LH +  + G LSD  +  +L+ +YA  GDL+S+  +    + K    +NAI++  + 
Sbjct: 469 GMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVR 528

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
                 E+ + LF   + AG + D    +  LS SA+ A L  G  LH  S+K G   D 
Sbjct: 529 H--GRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDS 586

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            V NA + MY KCG +D   +     + R    WN ++S YA +G  K A   F+ M   
Sbjct: 587 HVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSV 646

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
           G  PD ++ + +L AC ++GL + G+  +N +   +G+ P ++H  C+VDLLGR G+ +E
Sbjct: 647 GQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAE 706

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
           A   I+  P   + L+WR+L+S S+   N      A+K LL+L+P D  +++L+SN+YA 
Sbjct: 707 AEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYAT 766

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE 739
                +  K+R+ M  ++L+K   CSW+++ +++  F    + H  +E+IY KL    DE
Sbjct: 767 NARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKL----DE 822

Query: 740 MKLKVKD 746
           + LK+++
Sbjct: 823 ILLKLRE 829



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/575 (26%), Positives = 269/575 (46%), Gaps = 22/575 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G A+HA   ++G   + +    L++LY     +  AQ+LF  M  R+ ++WT+++     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  E  L     M +     N +  + ++  C  LED + G Q+ A  + SG   +V V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLI+M+ +    ++AE +F  +  +D    N MI  Y+        F V   +   + 
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +P+  T  +++SVC  +  V  G  +H L V  G+   + + NA+V MY   G  +EAE 
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL--DLGICCDSSCLATVIDGCSVC 374
           +F  +S R++ISW  +IS YV+S    +A+    + L  D G   +S   ++ +  CS  
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGP-PNSMTFSSALGACSSP 361

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
             L  G  +H   ++    + + +G +L+ +Y+K   ++    + +   C      N + 
Sbjct: 362 EALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLT 421

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL-VRGRSLHAYSIKT 493
            G+     +D  + M +FS  R  G++P+ +T   L     S   L   G  LHAY  +T
Sbjct: 422 GGY--AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQT 479

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G  +D  + N+LITMYA CG ++ +  IF  I+++ ++SWNA+++A   HG G+ A+ LF
Sbjct: 480 GLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLF 539

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC------- 606
            + +  G   D   +   L        S   +    E  Q++GL  +     C       
Sbjct: 540 MDSQHAGNKLDRFCLAECLS-------SSANLASLEEGMQLHGL-SVKNGLDCDSHVVNA 591

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            +D+ G+ G++   +  +   P       W TL+S
Sbjct: 592 TMDMYGKCGKMDCMLKTL-PDPAHRPTQCWNTLIS 625



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 171/344 (49%), Gaps = 8/344 (2%)

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ----LHGLAVKFGVV 292
           + G    AF +   +   D   + +   ++++ C E+ G +EG      +H L  + G++
Sbjct: 18  RCGLESTAFTLLRVMRERDVPLSGFALASLVTAC-EHRGWQEGAACGAAIHALTHRAGLM 76

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
             + +G A++ +YG  G+   A+R+F  + +RN++SWTA++     +G   +A+  +   
Sbjct: 77  GNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRM 136

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
              G+ C+++ LATV+  C    +   GLQ+    +  G L+ V +  +L+ ++     +
Sbjct: 137 RKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRV 196

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           + A  L D    +    +NA++S +  +  +      ++ S  R   ++PD  T   L+S
Sbjct: 197 QDAERLFDRMEERDRISWNAMISMYSHE--EVYSKCFIVLSDMRHGEVKPDVTTLCSLVS 254

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
           + AS   +  G  +H+  + +G    V + NAL+ MY+  G +D A  +F+ +S RD++S
Sbjct: 255 VCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVIS 314

Query: 533 WNAMLSAYALHGLGKGAL-LLFEEMKREGFAPDDISILGVLQAC 575
           WN M+S+Y        AL  L + ++ +   P+ ++    L AC
Sbjct: 315 WNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358


>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 206/675 (30%), Positives = 360/675 (53%), Gaps = 11/675 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VRSAITWTSLIKGYL 135
           G+++HA L+K G  + T   N+++  Y +    D+A  +F+ M   R +++W  LI G+L
Sbjct: 66  GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHL 125

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           D+G   + L    +   +  + N  T  ++++AC +L  +  G  +H + IKSGF     
Sbjct: 126 DNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISS 185

Query: 196 VGTSLISMYFHSG--CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL-L 252
           V  SL+SMY  +   C RE   +F  +  KDV   + MI  Y +  E ++   +F  + L
Sbjct: 186 VQNSLLSMYVDADMECARE---LFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               EP+     +V+  C  +  V  G+ +HGL +  G   ++ V N+++ MY K   + 
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A ++F+ IS+RN +SW +++SG+V + +  +A +         +  D   L  ++  C 
Sbjct: 303 SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICK 362

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +      +H   I+ G  ++  + +AL+D YAK   ++ A  +      +    ++ 
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWST 422

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++SGF      DE   + ++ +     ++P+ +T   LL   +  A L R +  H  +I+
Sbjct: 423 MISGFAHCGKPDE--AIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIR 480

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G+A++V VG A++ MY+KCG I  + + F  ++ ++IV+W+AM++AY ++GL   AL L
Sbjct: 481 QGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALAL 540

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F EMKR G  P+ ++ L VL AC + GL E G+ LF  + Q  GL P  EH++CMVD+LG
Sbjct: 541 FAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLG 600

Query: 613 RAGRLSEAMNLINSSP--FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           RAG+L  A+ +I + P        +W +L+S  +    ++    A  R+L+LEP ++  +
Sbjct: 601 RAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGY 660

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           ++ S+MYA  G+ D+AA++R    +  +   AG S + ID+K   FVA    HP S+EI+
Sbjct: 661 LVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIF 720

Query: 731 SKLDLLNDEMKLKVK 745
           S    L+D +K+  K
Sbjct: 721 SMAQQLHDCIKIDEK 735



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 168/353 (47%), Gaps = 1/353 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    S D+  G+ VH  ++  G   D F  N+LI++Y+K      A K+F+ +  R+
Sbjct: 256 VLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRN 315

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W S++ G++ + +Y     +   M +   + +E T   IL+ C         + IH 
Sbjct: 316 NVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHC 375

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+ G E N  V ++LI  Y        A  VF  +  +DV   + MI  +   G+ + 
Sbjct: 376 VMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDE 435

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  V+  +     +PN  T  N++  C     ++  K  HG+A++ G   E++VG A+V 
Sbjct: 436 AIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVD 495

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G    + R FD ++ +N+++W+A+I+ Y  +G   +A+  F E    G+  +   
Sbjct: 496 MYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVT 555

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKH-GYLSDVRLGTALVDIYAKGGDLKSA 415
             +V+  CS    +E GL L    ++  G        + +VD+  + G L +A
Sbjct: 556 TLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTA 608



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 155/306 (50%), Gaps = 5/306 (1%)

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE-RNLISWTAL 332
           L    GK LH   +K G     S+GN+I+  Y + G  + A  +F+++   R+ +SW  L
Sbjct: 61  LSHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNIL 120

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           I G++ +G     +  F      G   + S +  VI  C +      GL LHG+ IK G+
Sbjct: 121 IHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGF 180

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
            +   +  +L+ +Y    D++ AR L D    K    ++ ++ G+++   ++ +  + +F
Sbjct: 181 WAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQ--WEEPQVGLQMF 237

Query: 453 SQQRLA-GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
            +  L  G+EPD V    +L   AS   +  GR +H   I  G+  D+ V N+LI MY+K
Sbjct: 238 RKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSK 297

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           C     AF++F  IS R+ VSWN+MLS + L+     A  L   M++E    D+++++ +
Sbjct: 298 CKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNI 357

Query: 572 LQACIY 577
           LQ C Y
Sbjct: 358 LQICKY 363


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 186/564 (32%), Positives = 316/564 (56%), Gaps = 9/564 (1%)

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HAF      E NVF   +LI+ Y        A ++F  +   D+   N +I  Y   G++
Sbjct: 64  HAF--NQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDT 121

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A  +F  +       + +TF+ VI+ C  ++G+   +QLH LA   G    +SV N++
Sbjct: 122 LSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSL 179

Query: 302 VTMYGKHGMSEEAERMFDAISE--RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +T Y K+G+ EEAE +F+ + E  R+ +SW ++I  Y +   G KA+  + + +  G   
Sbjct: 180 LTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEI 239

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSARML 418
           D   LA+V+   S   +L  GLQ H  AIK G+  +  +G+ L+D+YAK G  +  +R +
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKV 299

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +         +N ++SG+ +   +   + +  F Q + AG  PD  +F   +S  ++ +
Sbjct: 300 FEEICGSDLVVWNTMISGYSQN-KELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLS 358

Query: 479 CLVRGRSLHAYSIKTGYAADVI-VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
              +G+  HA ++K+   ++ I V NAL+TMY+KCG++  A ++F+ +   + V+ N+++
Sbjct: 359 SPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSII 418

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + YA HG+G  +L LFE+M     AP  I+++ +L AC ++G  E G   FN ++ I+G+
Sbjct: 419 AGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGI 478

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P  EH++CM+DLLGRAG+LSEA  LI++ PFS     W  L+   +   N + +  A+ 
Sbjct: 479 EPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAAN 538

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           + L LEP +A  +I++++MY+     +EAA++R  M D  + K+ GCSWIE++ ++H FV
Sbjct: 539 QFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFV 598

Query: 718 ASGKDHPESEEIYSKLDLLNDEMK 741
           A    HP  +EI+  LD +  +MK
Sbjct: 599 AEDNSHPRIKEIHMYLDEMFVKMK 622



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 207/460 (45%), Gaps = 49/460 (10%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL------------- 109
           Q++K  I + DL  G+++H   LKS   + T+ +N+ I LY+K N L             
Sbjct: 13  QILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEP 72

Query: 110 ------------------DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
                              VA  LFD +     +++ +LI  Y D GD  S L +  +M 
Sbjct: 73  NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR 132

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
                 +  T S ++ AC      I   Q+H+ A  SGF++ V V  SL++ Y  +G   
Sbjct: 133 EMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILE 190

Query: 212 EAENVFRGLA--YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
           EAE VF G+    +D    N MI+ Y +      A  ++  ++   FE + +T  +V++ 
Sbjct: 191 EAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTT 250

Query: 270 --CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS-EEAERMFDAISERNL 326
             C E+L    G Q H  A+K G  +   VG+ ++ MY K G    E+ ++F+ I   +L
Sbjct: 251 FSCVEDLS--GGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDL 308

Query: 327 ISWTALISGYVRSGH-GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
           + W  +ISGY ++     +A+  F +    G   D       I  CS  S+   G Q H 
Sbjct: 309 VVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHA 368

Query: 386 FAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
            A+K    S+ + +  ALV +Y+K G+L+ AR L        T   N+I++G+ +     
Sbjct: 369 LAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGT 428

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           E   + LF Q   A + P  +T   +LS     AC   GR
Sbjct: 429 ES--LNLFEQMLAASIAPTSITLVSILS-----ACAHTGR 461



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 170/351 (48%), Gaps = 6/351 (1%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LVRSAITWTSLIKG 133
           L + +H+    SG  +     N+L+  Y+K   L+ A+ +F+GM   VR  ++W S+I  
Sbjct: 156 LIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVA 215

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y         L +  DM     + +  T + +L   S +ED   G Q HA AIK+GF  N
Sbjct: 216 YGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKN 275

Query: 194 VFVGTSLISMYFHSGC-FREAENVFRGLAYKDVRCVNFMILEYNKAGE-SEMAFHVFVHL 251
             VG+ LI MY   G    E+  VF  +   D+   N MI  Y++  E S  A   F  +
Sbjct: 276 RHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQM 335

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHGM 310
             + + P+D +F   IS C       +GKQ H LA+K  +   +ISV NA+VTMY K G 
Sbjct: 336 QRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGN 395

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            ++A ++F  + + N ++  ++I+GY + G G +++N F + L   I   S  L +++  
Sbjct: 396 LQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSA 455

Query: 371 CSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           C+    +E G +         G   +    + ++D+  + G L  A  L+D
Sbjct: 456 CAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLID 506



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 159/349 (45%), Gaps = 39/349 (11%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           +F  ++  C  N  +  GK LH + +K  +     + N  + +Y K  +   A   F+  
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 322 SERNLISWTALISGYVRS-------------------------------GHGGKAINGFL 350
            E N+ S+ ALI+ Y +                                G    A++ F 
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
           E  ++G+  D    + VI  C  C+++ L  QLH  A   G+ S V +  +L+  Y+K G
Sbjct: 130 EMREMGLVMDGFTFSGVITAC--CNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187

Query: 411 DLKSARMLLDGFSCKYTAE--FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            L+ A M+ +G   +   E  +N+++  + +         + L+      G E D  T +
Sbjct: 188 ILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQH--KRGLKALALYRDMVHRGFEIDMFTLA 245

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS-IDGAFQIFKGISD 527
            +L+  +    L  G   HA +IKTG+  +  VG+ LI MYAKCG+ +  + ++F+ I  
Sbjct: 246 SVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICG 305

Query: 528 RDIVSWNAMLSAYALHG-LGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            D+V WN M+S Y+ +  L   AL  F +M+R G+ PDD S +  + AC
Sbjct: 306 SDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISAC 354



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 4/129 (3%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           +F ++L    +   L+ G+SLH   +K+   +   + N  I +Y+KC  +  A   F   
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
            + ++ S+NA+++AYA   L   A  LF+++ +    PD +S   ++ A    G +   +
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQ----PDLVSFNTLINAYADRGDTLSAL 125

Query: 586 CLFNEIEQI 594
            LF E+ ++
Sbjct: 126 SLFGEMREM 134


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 211/696 (30%), Positives = 358/696 (51%), Gaps = 40/696 (5%)

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV-----AQKLFDGMLVRSAITWTSLIKG 133
           AVHA + ++      F  N+L+   A + RL V     A +L D M  R+A+++  LI  
Sbjct: 20  AVHAHIARAHPTASLFLRNSLL---AAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISS 76

Query: 134 YLDDGDYESVLGIACDMYRSEE-----KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           Y   G    + G A + +         + +  T +  L ACS   D   G+ +HA  +  
Sbjct: 77  YSRAG----LPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLD 132

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  N VF+  SL SMY   G   EA  VF      D    N ++  Y +AG  E    VF
Sbjct: 133 GLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVF 192

Query: 249 VHLLSSDFEPNDYTFTNVISVCYE--NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
             +       N +   ++I  C    ++G    + +HG  VK G+  ++ + +A++ MY 
Sbjct: 193 SLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYA 252

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHG-GK-----AINGFLEFLDLGICCD 360
           K G    A  +F ++ + N+I + A+I+G+ R     GK     A++ + E    G+   
Sbjct: 253 KRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPS 312

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               ++++  C++      G Q+HG  +KH +  D  +G+AL+D+Y+  G ++      D
Sbjct: 313 EFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCME------D 366

Query: 421 GFSC------KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           G+ C      +    + +++SG ++   +  E  + LF +    G++PD  T S +++  
Sbjct: 367 GYRCFRSLPKQDIVTWTSMISGCVQN--ELFEKALRLFQESICYGLKPDLFTMSSVMNAC 424

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           AS A    G  +   +IK G+     +GN+ I M A+ G +D   + F+ +  RD+VSW+
Sbjct: 425 ASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWS 484

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           A++S++A HG  + AL +F EM     AP++++ L VL AC + GL + G+  +  ++  
Sbjct: 485 AVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNE 544

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           YGL P ++H  C+VDLLGRAGRL++A   I  S F +  ++WR+L++  ++  + +   L
Sbjct: 545 YGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQL 604

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
            + +++DLEP  + S++++ NMY   G L  A+K R  M +  + KE G SWIE+ S +H
Sbjct: 605 VADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVH 664

Query: 715 HFVASGKDHPESEEIYSKL-DLLNDEMKLKVKDSSA 749
            FVA  K HPES  IY KL ++L+   KL   D+++
Sbjct: 665 SFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNAS 700



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 245/502 (48%), Gaps = 21/502 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+ G+AVHA  +  G  N  F +N+L ++YA    +  A+++FD       ++W SL+ 
Sbjct: 118 DLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLS 177

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED--RIFGEQIHAFAIKSGF 190
           GY+  G  E  L +   M      +N      I++ C+   D  R   E +H   +K+G 
Sbjct: 178 GYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGL 237

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK----AGE--SEMA 244
           + ++F+ +++I MY   G    A  +F+ +   +V   N MI  + +     G+  S  A
Sbjct: 238 DADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREA 297

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE--EGKQLHGLAVKFGVVREISVGNAIV 302
             ++  + S   +P+++TF++++  C  NL  E   GKQ+HG  +K     +  +G+A++
Sbjct: 298 LSLYSEMQSRGMQPSEFTFSSILRAC--NLAGEFGFGKQIHGQVLKHSFHDDDYIGSALI 355

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +Y   G  E+  R F ++ ++++++WT++ISG V++    KA+  F E +  G+  D  
Sbjct: 356 DLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLF 415

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +++V++ C+  +    G Q+   AIK+G+     +G + + + A+ GD+ +        
Sbjct: 416 TMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEM 475

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             +    ++A++S   +       D + +F++   A + P+ VTF  +L+  +    +  
Sbjct: 476 ESRDVVSWSAVISSHAQHGC--ARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDD 533

Query: 483 GRSLHAYSI---KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
           G  L  Y I   + G +  +     ++ +  + G +  A    +  +   D V W ++L+
Sbjct: 534 G--LRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLA 591

Query: 539 AYALHG-LGKGALLLFEEMKRE 559
           +  +HG + +G L+  + M  E
Sbjct: 592 SCRIHGDMERGQLVADQIMDLE 613



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 2/266 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G+   G+ +H  +LK    +D +  + LI+LY+    ++   + F  +  +  +TWTS+
Sbjct: 326 AGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSM 385

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G + +  +E  L +  +      K +  T S ++ AC+ L     GEQI   AIK GF
Sbjct: 386 ISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGF 445

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
                +G S I M   SG        F+ +  +DV   + +I  + + G +  A  +F  
Sbjct: 446 NRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNE 505

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVGNAIVTMYGKHG 309
           ++++   PN+ TF NV++ C     V++G + +  +  ++G+   I     +V + G+ G
Sbjct: 506 MMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAG 565

Query: 310 MSEEAERMF-DAISERNLISWTALIS 334
              +AE    D+    + + W +L++
Sbjct: 566 RLADAEAFIRDSAFHDDAVVWRSLLA 591


>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 211/669 (31%), Positives = 332/669 (49%), Gaps = 51/669 (7%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL------ 130
           G  +HA+ +++G +  T   N L++ YAK   L   Q++F+ +      +WT+L      
Sbjct: 72  GNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTK 131

Query: 131 -------------------------IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
                                    I G  ++   E  L +  +M++   + +++T + +
Sbjct: 132 LGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASV 191

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR---GLAY 222
           L  CSL E   FG ++H   IK+GF     V  +L++MYF+SG   +A  VF       +
Sbjct: 192 LSLCSL-ELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVH 250

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
            D+   N MI      G  E A  +F  +  +   P + TF +V+S C          Q+
Sbjct: 251 DDI-TFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS---SARVSHQV 306

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H  A+K G      V NA +TMY   G       +FD + E++LISW  +I  Y +    
Sbjct: 307 HAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFY 366

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
             AI  FL+    GI  D   + +++   +   +LE+         K+G  S + +  AL
Sbjct: 367 RLAILAFLQMQRAGIEPDEFTIGSLL---ASSESLEIVKMFQALVSKNGLNSKIEVSNAL 423

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK---IADDEEDVMVLFSQQRLAG 459
           V  ++K G ++ A  + +  S      +N I+SGF+     +   E+     F +  ++ 
Sbjct: 424 VSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQ-----FYELLMST 478

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           ++P+  T S +LS+ AS + L  G+ +H Y +++G  +   +GNALITMYAKCG +D + 
Sbjct: 479 LKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSL 538

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYS 578
           +IF  ++ RDIVSWNAM+SAYA HG GK A+  F+ M+  G   PD  +   VL AC ++
Sbjct: 539 RIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHA 598

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           GL + G  +FN +   YG  P  +H +C+VDLLGRAG L EA  LINS        +W T
Sbjct: 599 GLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWT 658

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L S      N +   + +  LL++E  D   ++L+SN+YA  G  +EAA  R  M   R+
Sbjct: 659 LFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRV 718

Query: 699 SKEAGCSWI 707
           +K+ GCSWI
Sbjct: 719 AKQPGCSWI 727



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 239/493 (48%), Gaps = 19/493 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LVRSAITWTSLI 131
           L  G+ VH  ++K+G        N L+ +Y    ++  A ++F+     V   IT+  +I
Sbjct: 200 LDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMI 259

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G    G  E  L +  +M  +  +  E T   ++ +CS    R+   Q+HA AIK GFE
Sbjct: 260 GGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS--SARV-SHQVHAQAIKMGFE 316

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
               V  + ++MY   G       VF  L  KD+   N +I+ Y +     +A   F+ +
Sbjct: 317 ACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQM 376

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             +  EP+++T  ++++    +  +E  K    L  K G+  +I V NA+V+ + KHG  
Sbjct: 377 QRAGIEPDEFTIGSLLA---SSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQI 433

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+A ++F+ +S  NLISW  +ISG++ +G   + +  F E L   +  ++  L+ V+  C
Sbjct: 434 EQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSIC 493

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  S L  G Q+HG+ ++ G  S   LG AL+ +YAK GDL  +  + +  + +    +N
Sbjct: 494 ASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWN 553

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR--GRSLHAY 489
           A++S + +     +E V    + Q   G++PD  TF+ +LS + S A LV    R  ++ 
Sbjct: 554 AMISAYAQH-GKGKEAVHFFKAMQDSGGVKPDQATFTAVLS-ACSHAGLVDDGTRIFNSM 611

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---L 545
               G+       + ++ +  + G ++ A ++      + + S W  + SA A HG   L
Sbjct: 612 VNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRL 671

Query: 546 GK---GALLLFEE 555
           G+   G LL  E+
Sbjct: 672 GRIVAGFLLEIEQ 684



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 211/450 (46%), Gaps = 49/450 (10%)

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDF-EPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
           +N ++ E  ++  +  +  +FV + SS++ +P+ +T ++ ++ C        G QLH  +
Sbjct: 20  INQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYS 79

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT---------------- 330
           ++ G+     VGN +++ Y K       +R+F+ I   ++ SWT                
Sbjct: 80  IQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYAC 139

Query: 331 ---------------ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
                          A+I+G   + H   A+N F E   LG+  D    A+V+  CS+  
Sbjct: 140 HLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCSL-E 198

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE--FNAI 433
            L+ G ++H   IK G+L    +  AL+ +Y   G +  A  + +        +  FN +
Sbjct: 199 LLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVM 258

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + G +  +  DEE  +++F + + A + P  +TF  ++S  +S         +HA +IK 
Sbjct: 259 IGG-LASVGRDEE-ALIMFKEMQEACLRPTELTFVSVMSSCSSARV---SHQVHAQAIKM 313

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+ A   V NA +TMY+ CG++     +F  + ++D++SWN ++  YA     + A+L F
Sbjct: 314 GFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAF 373

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            +M+R G  PD+ +I  +L     S  S   + +F  +    GL   +E    +V    +
Sbjct: 374 LQMQRAGIEPDEFTIGSLLA----SSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSK 429

Query: 614 AGRLSEAMNLIN--SSPFSESPLLWRTLVS 641
            G++ +A  + N  SSP   + + W T++S
Sbjct: 430 HGQIEQAYQVFNNMSSP---NLISWNTIIS 456



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 139/583 (23%), Positives = 254/583 (43%), Gaps = 61/583 (10%)

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           K +  T S  L AC+ L     G Q+HA++I++G +    VG +L+S Y  S      + 
Sbjct: 50  KPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQR 109

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGE-------------------------------SEMA 244
           VF  +   DV     ++    K G+                               +E+A
Sbjct: 110 VFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIA 169

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            ++F  +       + YTF +V+S+C   L ++ G+++H L +K G +   SV NA++TM
Sbjct: 170 LNLFREMHQLGVRHDKYTFASVLSLCSLEL-LDFGREVHTLVIKTGFLVRASVINALLTM 228

Query: 305 YGKHGMSEEAERMFDAI--SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
           Y   G   +A  +F+    +  + I++  +I G    G   +A+  F E  +    C   
Sbjct: 229 YFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQE---ACLRP 285

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
              T +   S CS+  +  Q+H  AIK G+ +   +  A + +Y+  G+L +  M+ D  
Sbjct: 286 TELTFVSVMSSCSSARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRL 345

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    +N I+  + +   +     ++ F Q + AG+EPD  T   LL   AS   L  
Sbjct: 346 EEKDLISWNIIIMNYAQ--GNFYRLAILAFLQMQRAGIEPDEFTIGSLL---ASSESLEI 400

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
            +   A   K G  + + V NAL++ ++K G I+ A+Q+F  +S  +++SWN ++S +  
Sbjct: 401 VKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLF 460

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG--LR-- 598
           +G     L  F E+      P+  ++  VL  C         I      +QI+G  LR  
Sbjct: 461 NGFTLQGLEQFYELLMSTLKPNAYTLSIVLSIC-------ASISALRHGKQIHGYILRSG 513

Query: 599 --PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
              +      ++ +  + G L  ++ + N        + W  ++S        K ++   
Sbjct: 514 VFSVTSLGNALITMYAKCGDLDWSLRIFNVMN-GRDIVSWNAMISAYAQHGKGKEAVHFF 572

Query: 657 KRLLD---LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM-ND 695
           K + D   ++P D  +F  V +  +  G++D+  ++  +M ND
Sbjct: 573 KAMQDSGGVKP-DQATFTAVLSACSHAGLVDDGTRIFNSMVND 614



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 190/413 (46%), Gaps = 21/413 (5%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           ++   VHA  +K G +  T  +N  + +Y+    L     +FD +  +  I+W  +I  Y
Sbjct: 301 RVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNY 360

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
                Y   +     M R+  + +E T   +L +   LE     +   A   K+G  + +
Sbjct: 361 AQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLE---IVKMFQALVSKNGLNSKI 417

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            V  +L+S +   G   +A  VF  ++  ++   N +I  +   G +      F  LL S
Sbjct: 418 EVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMS 477

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
             +PN YT + V+S+C     +  GKQ+HG  ++ GV    S+GNA++TMY K G  + +
Sbjct: 478 TLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWS 537

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSV 373
            R+F+ ++ R+++SW A+IS Y + G G +A++ F    D  G+  D +    V+  CS 
Sbjct: 538 LRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSH 597

Query: 374 CSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE--- 429
              ++ G ++    +  +G+       + +VD+  + G L+ A  L++    K  +    
Sbjct: 598 AGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWW 657

Query: 430 --FNA-----------ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
             F+A           I++GF+ +I  ++  V VL S    A  + +    +R
Sbjct: 658 TLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTR 710


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 198/619 (31%), Positives = 332/619 (53%), Gaps = 16/619 (2%)

Query: 103 YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEH 160
           YA    +  A+KLFD M   S +++  +I+ Y+ DG Y   + +   M     K   + +
Sbjct: 59  YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGY 118

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   + +A   L+    G  IH   ++S F  + +V  +L++MY + G    A NVF  +
Sbjct: 119 TYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVM 178

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             +DV   N MI  Y + G    A  +F  +++   +P+  T  +++ VC    G+E G+
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGR 238

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +H L  +  +  +I V NA+V MY K G  +EA  +F  +  R++I+WT +I+GY+  G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDG 298

Query: 341 HGGKAINGFLEFLDL----GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
                +   LE   L    G+  ++  +A+++  C     L  G  LHG+AI+    SD+
Sbjct: 299 D----VENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDI 354

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            + T+L+ +YAK   +     +  G S  +T  ++AI++G ++   +   D + LF + R
Sbjct: 355 IIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQN--ELVRDALDLFKRMR 412

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
              +EP+  T + LL   A+ A L +  ++H Y  KTG+ + +     L+ +Y+KCG+++
Sbjct: 413 REDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLE 472

Query: 517 GAFQIFKGISDR----DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
            A +IF GI ++    D+V W A++S Y +HG G  AL +F EM R G  P++I+    L
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSAL 532

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC +SGL E G+ LF+ + + Y       H+ C+VDLLGRAGRL EA NLI + PF  +
Sbjct: 533 NACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPT 592

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
             +W  L++      N +   +A+ +L +LEP++ G+++L++N+YA  G   +  KVR  
Sbjct: 593 STIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNM 652

Query: 693 MNDLRLSKEAGCSWIEIDS 711
           M ++ L K+ G S IEI S
Sbjct: 653 MENVGLRKKPGHSTIEIRS 671



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/488 (23%), Positives = 233/488 (47%), Gaps = 15/488 (3%)

Query: 67  ISIGSGDLK---LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++  +G+LK   LG  +H  +L+S    D +  N L+ +Y  F R+++A+ +FD M  R 
Sbjct: 123 VAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRD 182

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+W ++I GY  +G     L +   M       +  T   +L  C  L+    G  +H 
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHK 242

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
              +    + + V  +L++MY   G   EA  VF  +  +DV     MI  Y + G+ E 
Sbjct: 243 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVEN 302

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +   +      PN  T  +++S C + L + +GK LHG A++  V  +I +  ++++
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLIS 362

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K    +   R+F   S  +   W+A+I+G V++     A++ F       +  + + 
Sbjct: 363 MYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIAT 422

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L +++   +  ++L   + +H +  K G++S +   T LV +Y+K G L+SA  + +G  
Sbjct: 423 LNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482

Query: 424 CKYTAE----FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
            K+ ++    + A++SG+   +  D  + + +F +   +G+ P+ +TF+  L+  +    
Sbjct: 483 EKHKSKDVVLWGALISGY--GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGL 540

Query: 480 LVRGRSLHAYSIKTGYAADVIVGN---ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNA 535
           +  G +L ++ ++  +   +   N    ++ +  + G +D A+ +   I      + W A
Sbjct: 541 VEEGLTLFSFMLE--HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGA 598

Query: 536 MLSAYALH 543
           +L+A   H
Sbjct: 599 LLAACVTH 606


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 171/486 (35%), Positives = 285/486 (58%), Gaps = 4/486 (0%)

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            EP    ++ +++ C     +++G+ +H          ++ + N I+ MY K G  EEA+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +FD +  ++++SWT LISGY +SG   +A+  F + L LG   +   L++++       
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +   G QLH F++K+GY  +V +G++L+D+YA+   ++ A+++ +  + K    +NA+++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G   K   + E VM LF Q    G EP   T+S +L+  AS   L +G+ +HA+ IK+G 
Sbjct: 281 GHARK--GEGEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGG 337

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
                +GN LI MYAK GSI  A ++F+ +  +DIVSWN+++S YA HGLG  AL LFE+
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 397

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           M +    P++I+ L VL AC +SGL + G   F E+ + + +   + H   +VDLLGRAG
Sbjct: 398 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHHVTVVDLLGRAG 456

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           RL+EA   I   P   +  +W  L+   ++  N    + A++++ +L+P D+G  +L+SN
Sbjct: 457 RLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSN 516

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +YA  G L +AAKVR  M +  + KE  CSW+EI++++H FVA+   HP  EEI    + 
Sbjct: 517 IYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEK 576

Query: 736 LNDEMK 741
           ++ ++K
Sbjct: 577 ISGKIK 582



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 187/363 (51%), Gaps = 1/363 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK G+A+HA +  S  ++D    N ++N+YAK   L+ AQ LFD M  +  ++WT LI G
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G     L +   M     + NE T S +L+A         G Q+HAF++K G++ N
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V VG+SL+ MY      REA+ +F  LA K+V   N +I  + + GE E    +F  +L 
Sbjct: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLR 300

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
             FEP  +T+++V++ C  +  +E+GK +H   +K G      +GN ++ MY K G  ++
Sbjct: 301 QGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKD 359

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+++F  + +++++SW ++ISGY + G G +A+  F + L   +  +     +V+  CS 
Sbjct: 360 AKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSH 419

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L+ G        KH   + V     +VD+  + G L  A   ++    K TA     
Sbjct: 420 SGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGA 479

Query: 434 LSG 436
           L G
Sbjct: 480 LLG 482



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 190/382 (49%), Gaps = 4/382 (1%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           S +L  C+ L     G  IHA    S FE+++ +   +++MY   G   EA+++F  +  
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           KD+     +I  Y+++G++  A  +F  +L   F+PN++T ++++           G+QL
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H  ++K+G    + VG++++ MY +     EA+ +F++++ +N++SW ALI+G+ R G G
Sbjct: 229 HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
              +  F + L  G        ++V+  C+   +LE G  +H   IK G      +G  L
Sbjct: 289 EHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 347

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+YAK G +K A+ +      +    +N+I+SG+ +     E   + LF Q   A ++P
Sbjct: 348 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE--ALQLFEQMLKAKVQP 405

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           + +TF  +L+  +    L  G+       K    A V     ++ +  + G ++ A +  
Sbjct: 406 NEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFI 465

Query: 523 KGISDRDIVS-WNAMLSAYALH 543
           + +  +   + W A+L A  +H
Sbjct: 466 EEMPIKPTAAVWGALLGACRMH 487



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 16/264 (6%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG L+ G+ VHA ++KSG Q   +  N LI++YAK   +  A+K+F  ++ +  ++W S+
Sbjct: 319 SGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSI 378

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIK 187
           I GY   G     L +   M +++ + NE T   +L ACS   LL++   G+       K
Sbjct: 379 ISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDE---GQYYFELMKK 435

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
              E  V    +++ +   +G   EA      +  K    V   +L   +  ++ M   V
Sbjct: 436 HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKN-MDLGV 494

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVRE-----ISVGNAI 301
           +      + +P+D     ++S  Y + G + +  ++  +  + GV +E     + + N +
Sbjct: 495 YAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEV 554

Query: 302 ---VTMYGKHGMSEEAERMFDAIS 322
              V     H M EE +RM++ IS
Sbjct: 555 HVFVANDDSHPMREEIQRMWEKIS 578


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 178/560 (31%), Positives = 297/560 (53%), Gaps = 39/560 (6%)

Query: 206 HSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
           H   F  A +VF  +   +    N M+  Y  + +   A  ++V ++S    PN YTF  
Sbjct: 12  HFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPF 71

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER--------- 316
           ++  C ++   EEG+Q+HG  +K G   ++ V  ++++MY ++G  E+A +         
Sbjct: 72  LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131

Query: 317 ----------------------MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
                                 MFD I  ++++SW A+ISGY  +G   +A+  F E + 
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             +  D   + TV+  C+   ++ELG Q+H +   HG+ S++++  AL+D+Y+K G +++
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A  L +G SCK    +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTH--MNLYKEALLLFQEMLRSGESPNDVTIVSILPAC 309

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVI----VGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           A    +  GR +H Y  K     DV     +  +LI MYAKCG I+ A Q+F  +  + +
Sbjct: 310 AHLGAIDIGRWIHVYIDKK--LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 367

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
            SWNAM+  +A+HG       LF  M++ G  PDDI+ +G+L AC +SG  + G  +F  
Sbjct: 368 SSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKS 427

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           + Q Y + P LEH+ CM+DLLG +G   EA  +I + P     ++W +L+   +   N +
Sbjct: 428 MTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLE 487

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            +   ++ L+ +EP++ GS++L+SN+YA  G  DE AKVR  +N   + K  GCS IEID
Sbjct: 488 LAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEID 547

Query: 711 SKLHHFVASGKDHPESEEIY 730
           S++H F+   K HP + EIY
Sbjct: 548 SEVHEFIVGDKLHPRNREIY 567



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 223/482 (46%), Gaps = 45/482 (9%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           L   F+    A  +F  +   + + W ++++GY    D  S L +   M       N +T
Sbjct: 9   LSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYT 68

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH--------------- 206
              +L++C+  +    G+QIH   +K G+E +++V TSLISMY                 
Sbjct: 69  FPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSS 128

Query: 207 ----------------SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
                           SG  R A+ +F  +  KDV   N MI  Y + G  + A  +F  
Sbjct: 129 HRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKE 188

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++ ++  P++ T   V+S C ++  VE G+Q+H      G    + + NA++ +Y K G 
Sbjct: 189 MMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ 248

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A  +F+ +S ++++SW  LI GY       +A+  F E L  G   +   + +++  
Sbjct: 249 VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPA 308

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVR----LGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           C+    +++G  +H +  K   L DV     L T+L+D+YAK GD+++A  + +    K 
Sbjct: 309 CAHLGAIDIGRWIHVYIDKK--LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS 366

Query: 427 TAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
            + +NA++ GF M   A+   D   LFS+ R  G+EPD +TF  LLS  +    L  GR 
Sbjct: 367 LSSWNAMIFGFAMHGRANAGFD---LFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRH 423

Query: 486 LHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
           +   S+   Y     + +   +I +    G    A ++ K +  + D V W ++L A   
Sbjct: 424 IFK-SMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRR 482

Query: 543 HG 544
           HG
Sbjct: 483 HG 484



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 161/356 (45%), Gaps = 33/356 (9%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD---------- 110
           +P L+K    S   + GQ +H  +LK G + D +   +LI++YA+  RL+          
Sbjct: 69  FPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSS 128

Query: 111 ---------------------VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
                                 AQ++FD + V+  ++W ++I GY + G Y+  L +  +
Sbjct: 129 HRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKE 188

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M ++  + +E T   +L AC+       G Q+H++    GF +N+ +  +LI +Y   G 
Sbjct: 189 MMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ 248

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
              A  +F GL+ KDV   N +I  Y      + A  +F  +L S   PND T  +++  
Sbjct: 249 VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPA 308

Query: 270 CYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
           C     ++ G+ +H    K    V    S+  +++ MY K G  E A ++F+++  ++L 
Sbjct: 309 CAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLS 368

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           SW A+I G+   G      + F      GI  D      ++  CS    L+LG  +
Sbjct: 369 SWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 4/275 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  ++LG+ VH+++   G  ++    N LI+LY+K  +++ A  LF+G+  +  ++W +L
Sbjct: 211 SRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTL 270

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK--S 188
           I GY     Y+  L +  +M RS E  N+ T   IL AC+ L     G  IH +  K   
Sbjct: 271 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLK 330

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
              N   + TSLI MY   G    A  VF  + +K +   N MI  +   G +   F +F
Sbjct: 331 DVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLF 390

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGK 307
             +  +  EP+D TF  ++S C  +  ++ G+ +   +   + +  ++     ++ + G 
Sbjct: 391 SRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGH 450

Query: 308 HGMSEEAERMFDAIS-ERNLISWTALISGYVRSGH 341
            G+ +EA+ M   +  E + + W +L+    R G+
Sbjct: 451 SGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGN 485


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/555 (33%), Positives = 307/555 (55%), Gaps = 4/555 (0%)

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF  ++ +   LI MY   G    A +VF  +  ++V     ++  + + G    +  +F
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +  S  +PND+TF+  +  C    G++ G+Q+H + VK G      VGN+I+ MY K 
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G   EA  MF+ +  RNLISW A+I+GY  +G   KA+  F +  ++G   D     + +
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVR--LGTALVDIYAKGGDLKSARMLLDGFSCKY 426
             CS    ++ G Q+H F I  G+L  V   +  AL+D+Y K G L  AR +      K+
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              + A++ G+ ++   +  + M LF Q R + ++ D    S ++ + A  A + +G+ +
Sbjct: 242 VISWTALILGYAQE--GNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQM 299

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HA++IK     D+ V N+++ MY KCG I+ A ++F  +  R+++SW  M++ Y  HGLG
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           K A+ LF+EM+ +   PDD++ L VL  C +SGL E G   F+ +   +G++  +EH+AC
Sbjct: 360 KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC 419

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           MVDLLGRAGRL EA NL++S P   +  +W+TL+S  ++  + +        LL L+ ++
Sbjct: 420 MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSEN 479

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
             +++++SN+YA  G   E  ++R  +   +L KEAG SW+EID ++H F      HP +
Sbjct: 480 PVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLT 539

Query: 727 EEIYSKLDLLNDEMK 741
           E+I+  L  +   MK
Sbjct: 540 EKIHEILKEMERRMK 554



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 236/477 (49%), Gaps = 25/477 (5%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D   +N+LI +Y K  RL VA  +FD ML R+ ++WT+L+ G++ +G+    L +   M 
Sbjct: 6   DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
            S  K N+ T S  L+AC LL     G QIH   +K+GF+    VG S+I MY   G   
Sbjct: 66  LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRIN 125

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           EA  +F  +  +++   N MI  Y  AG  E A  +F  +       +++TFT+ +  C 
Sbjct: 126 EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACS 185

Query: 272 ENLGVEEGKQLHGLAVKFGVVREI--SVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           +   ++EG Q+H   +  G +  +  +V  A++ +Y K G    A R+F  I E+++ISW
Sbjct: 186 DLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISW 245

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           TALI GY + G+  +++  F +  +  I  D   L++++   +  + ++ G Q+H FAIK
Sbjct: 246 TALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIK 305

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
                D+ +  +++D+Y K G +  A  L      +    +  +++G+ +     E   +
Sbjct: 306 VPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE--AI 363

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLV--------RGRSLHAYSIKTGYAADVIV 501
            LF + +L   EPD VT+  +L L  S + LV        R  S H    +  + A    
Sbjct: 364 RLFDEMQLDSTEPDDVTYLAVL-LGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYA---- 418

Query: 502 GNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LGK--GALLL 552
              ++ +  + G +  A  +   +  + ++  W  +LSA  +HG   LGK  G +LL
Sbjct: 419 --CMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILL 473



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 179/351 (50%), Gaps = 5/351 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L +G+ +H   +K+G        N++I++Y+K  R++ A  +F+ M VR+ I+W ++I G
Sbjct: 89  LDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAG 148

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF--E 191
           Y   G  E  L +   M       +E T +  L+ACS L     G QIHAF I  GF   
Sbjct: 149 YTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYS 208

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            N  V  +LI +Y   G    A  VF  +  K V     +IL Y + G    +  +F  L
Sbjct: 209 VNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQL 268

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             S  + + +  ++++ V  +   V++GKQ+H  A+K     +ISV N+I+ MY K GM 
Sbjct: 269 RESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMI 328

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCLATVIDG 370
            EAER+F  +  RN+ISWT +I+GY + G G +AI  F E  LD     D + LA ++ G
Sbjct: 329 NEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLL-G 387

Query: 371 CSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           CS    +E G +        HG  + V     +VD+  + G LK A+ L+D
Sbjct: 388 CSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVD 438



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 139/289 (48%), Gaps = 6/289 (2%)

Query: 72  GDLKLGQAVHAFLLKSG--SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G +K G  +HAFL+  G     +T  A  LI+LY K  +L +A+++F  +  +  I+WT+
Sbjct: 188 GAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTA 247

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI GY  +G+    + +   +  S  + +    S ++   +       G+Q+HAFAIK  
Sbjct: 248 LILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVP 307

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
              ++ V  S++ MY   G   EAE +F  +  ++V     MI  Y K G  + A  +F 
Sbjct: 308 SGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFD 367

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKH 308
            +     EP+D T+  V+  C  +  VE+G++    L    G+   +     +V + G+ 
Sbjct: 368 EMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRA 427

Query: 309 GMSEEAERMFDAIS-ERNLISWTALISGYVRSG--HGGKAINGFLEFLD 354
           G  +EA+ + D++  E N+  W  L+S     G    GK + G L  LD
Sbjct: 428 GRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLD 476


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 191/584 (32%), Positives = 306/584 (52%), Gaps = 38/584 (6%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG---ESEMAFHV 247
           + N++   +L+S Y    C  E E VF  +  +D+   N +I  Y   G   +S  A+++
Sbjct: 72  QRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNL 131

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
              L +  F  N    + ++ +  +   V  G Q+HG  VKFG    + VG+ +V MY K
Sbjct: 132 M--LYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSK 189

Query: 308 HGMSEEAERMFDAISERNL-------------------------------ISWTALISGY 336
            G+   A + FD + E+N+                               ISWTA+I+G+
Sbjct: 190 TGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGF 249

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            ++G   +AI+ F E     +  D     +V+  C     L+ G Q+H + I+  Y  ++
Sbjct: 250 TQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI 309

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +G+ALVD+Y K   +KSA  +    +CK    + A+L G+ +      E+ + +F   +
Sbjct: 310 FVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQN--GYSEEAVKIFCDMQ 367

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
             G+EPD  T   ++S  A+ A L  G   H  ++ +G  + + V NAL+T+Y KCGSI+
Sbjct: 368 NNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIE 427

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            + ++F  +S  D VSW A++S YA  G     L LFE M   GF PD ++ +GVL AC 
Sbjct: 428 DSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACS 487

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
            +GL + G  +F  + + + + PI +H+ CM+DL  RAGRL EA   IN  PFS   + W
Sbjct: 488 RAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGW 547

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
            +L+S  +   N +    A++ LL LEP +  S+IL+S++YA +G  +E A +R  M D 
Sbjct: 548 ASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDK 607

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
            L KE GCSWI+  +++H F A  + +P S++IYS+L+ LN +M
Sbjct: 608 GLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKM 651



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 197/381 (51%), Gaps = 32/381 (8%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK---------------------FN--- 107
           G + LG  VH  ++K G Q+  F  + L+++Y+K                     +N   
Sbjct: 156 GCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLI 215

Query: 108 -------RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
                  R++ +++LF  M  + +I+WT++I G+  +G     + +  +M     + +++
Sbjct: 216 AGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQY 275

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   +L AC  +     G+Q+HA+ I++ +++N+FVG++L+ MY      + AE VFR +
Sbjct: 276 TFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKM 335

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             K+V     M++ Y + G SE A  +F  + ++  EP+D+T  +VIS C     +EEG 
Sbjct: 336 NCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGA 395

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           Q H  A+  G++  I+V NA+VT+YGK G  E++ R+F  +S  + +SWTAL+SGY + G
Sbjct: 396 QFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFG 455

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLG 399
              + +  F   L  G   D      V+  CS    ++ G Q+    IK H  +      
Sbjct: 456 KANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHY 515

Query: 400 TALVDIYAKGGDLKSARMLLD 420
           T ++D++++ G L+ AR  ++
Sbjct: 516 TCMIDLFSRAGRLEEARKFIN 536



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 234/531 (44%), Gaps = 67/531 (12%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD-------------------- 117
           + +H  ++K+    + F  NNL++ YAKF+R+  A+++FD                    
Sbjct: 29  KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88

Query: 118 -----------GMLVRSAITWTSLIKGYLDDGDY-ESVLGIACDMYRSEEKFNEHTCSVI 165
                       M  R  ++W SLI  Y   G   +SV      +Y      N    S +
Sbjct: 89  ACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTM 148

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG---CFREA--------- 213
           L   S       G Q+H   +K GF++ VFVG+ L+ MY  +G   C R+A         
Sbjct: 149 LILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNV 208

Query: 214 -------------------ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
                                +F  +  KD      MI  + + G    A  +F  +   
Sbjct: 209 VMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLE 268

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
           + E + YTF +V++ C   + ++EGKQ+H   ++      I VG+A+V MY K    + A
Sbjct: 269 NLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSA 328

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
           E +F  ++ +N++SWTA++ GY ++G+  +A+  F +  + GI  D   L +VI  C+  
Sbjct: 329 ETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANL 388

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           ++LE G Q H  A+  G +S + +  ALV +Y K G ++ +  L    S      + A++
Sbjct: 389 ASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALV 448

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           SG+ +    +E   + LF      G +PD VTF  +LS  +    + +G  +    IK  
Sbjct: 449 SGYAQFGKANE--TLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEH 506

Query: 495 YAADVIVG-NALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
               +      +I ++++ G ++ A +    +    D + W ++LS+   H
Sbjct: 507 RIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH 557



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 135/263 (51%), Gaps = 2/263 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VHA+++++  Q++ F  + L+++Y K   +  A+ +F  M  ++ ++WT+++ G
Sbjct: 290 LQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVG 349

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G  E  + I CDM  +  + ++ T   ++ +C+ L     G Q H  A+ SG  + 
Sbjct: 350 YGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISF 409

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + V  +L+++Y   G   ++  +F  ++Y D      ++  Y + G++     +F  +L+
Sbjct: 410 ITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLA 469

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG-NAIVTMYGKHGMSE 312
             F+P+  TF  V+S C     V++G Q+    +K   +  I      ++ ++ + G  E
Sbjct: 470 HGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLE 529

Query: 313 EAERMFDAIS-ERNLISWTALIS 334
           EA +  + +    + I W +L+S
Sbjct: 530 EARKFINKMPFSPDAIGWASLLS 552


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 209/711 (29%), Positives = 348/711 (48%), Gaps = 62/711 (8%)

Query: 91   NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD-GDYESVLGIACD 149
            N    A NLI+ Y  F     A  +F   L R+ + W S ++ +    G    VL +  +
Sbjct: 605  NPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKE 664

Query: 150  MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
            ++     F+    SV L+ C+ + D   G +IH   IK GF+ +V++  +L++ Y     
Sbjct: 665  LHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG 724

Query: 210  FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
              +A  VF  +   +    N  I+   ++ + +    +F  +  S  +    T   V+  
Sbjct: 725  LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 784

Query: 270  CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
            C +   +   KQ+HG   +FG+  ++S+ N +++MY K+G  E A R+FD++  RN  SW
Sbjct: 785  CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW 844

Query: 330  TALISGYVRSG---------------------------------HGGK--AINGFLEFLD 354
             ++IS Y   G                                 HG K   +N       
Sbjct: 845  NSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQG 904

Query: 355  LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             G   +SS + +V+   S    L +G + HG+ +++G+  DV +GT+L+D+Y K   L S
Sbjct: 905  EGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXS 964

Query: 415  ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS-- 472
            A+ + D    +    +N+++SG+  K     ED + L +Q    G++PD VT++ ++S  
Sbjct: 965  AQAVFDNMKNRNIFAWNSLVSGYSFKGM--FEDALRLLNQMEKEGIKPDLVTWNGMISGY 1022

Query: 473  ------------LSASQACLVR----------GRSLHAYSIKTGYAADVIVGNALITMYA 510
                         SAS  CL+R          G+ +H  SI+ G+  DV V  ALI MY+
Sbjct: 1023 AMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYS 1082

Query: 511  KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
            K  S+  A ++F+ I ++ + SWN M+  +A+ GLGK A+ +F EM++ G  PD I+   
Sbjct: 1083 KSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTA 1142

Query: 571  VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
            +L AC  SGL   G   F+ +   Y + P LEH+ CMVDLLGRAG L EA +LI++ P  
Sbjct: 1143 LLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK 1202

Query: 631  ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
                +W  L+   ++  N  F+  A+K L  LEP ++ ++IL+ N+Y+     ++   +R
Sbjct: 1203 PDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLR 1262

Query: 691  TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
              M    +      SWI+I+ ++H F +  K HP++ +IY +L  L  EMK
Sbjct: 1263 ELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMK 1313



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 128/533 (24%), Positives = 232/533 (43%), Gaps = 65/533 (12%)

Query: 73   DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
            D+ LG  +H  L+K G   D +    L+N Y +   L+ A ++F  M    A+ W   I 
Sbjct: 689  DIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAII 748

Query: 133  GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
              L     +  + +   M  S  K    T   +L+AC  +      +QIH +  + G ++
Sbjct: 749  LNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDS 808

Query: 193  NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            +V +   LISMY  +G    A  VF  +  ++    N MI  Y   G    A+ +F  L 
Sbjct: 809  DVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELE 868

Query: 253  SSD-----------------------------------FEPNDYTFTNVISVCYENLGVE 277
            SSD                                   F+PN  + T+V+    E   + 
Sbjct: 869  SSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLN 928

Query: 278  EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
             GK+ HG  ++ G   ++ VG +++ MY K+     A+ +FD +  RN+ +W +L+SGY 
Sbjct: 929  MGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYS 988

Query: 338  RSGHGGKAI------------------NGFLEFLDLGICC------DSSCLATVIDGCSV 373
              G    A+                  NG +    +  C       +S+ +  ++  C+ 
Sbjct: 989  FKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACAS 1048

Query: 374  CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             S L+ G ++H  +I++G++ DV + TAL+D+Y+K   LK+A  +      K  A +N +
Sbjct: 1049 LSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCM 1108

Query: 434  LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
            + GF   I    ++ + +F++ +  G+ PD +TF+ LLS   +   +  G   +  S+ T
Sbjct: 1109 IMGF--AIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWK-YFDSMIT 1165

Query: 494  GYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
             Y     + +   ++ +  + G +D A+ +   +  + D   W A+L +  +H
Sbjct: 1166 DYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 1218



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 185/430 (43%), Gaps = 70/430 (16%)

Query: 72   GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            G L   + +H ++ + G  +D    N LI++Y+K  +L++A+++FD M  R+  +W S+I
Sbjct: 789  GALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMI 848

Query: 132  K-----GYLDD------------------------------GDYESVLGIACDMYRSEEK 156
                  G+L+D                              G  E VL I   M     K
Sbjct: 849  SSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFK 908

Query: 157  FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
             N  + + +L+A S L     G++ H + +++GF+ +V+VGTSLI MY  +     A+ V
Sbjct: 909  PNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAV 968

Query: 217  FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL----LSSD----------------- 255
            F  +  +++   N ++  Y+  G  E A  +   +    +  D                 
Sbjct: 969  FDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCA 1028

Query: 256  ---FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               F PN  + T ++  C     +++GK++H L+++ G + ++ V  A++ MY K    +
Sbjct: 1029 RKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLK 1088

Query: 313  EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
             A ++F  I  + L SW  +I G+   G G +AI+ F E   +G+  D+     ++  C 
Sbjct: 1089 NAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACK 1148

Query: 373  VCSNLELGLQLHGFAIKHGYLSDVRLGTAL------VDIYAKGGDLKSARMLLDGFSCKY 426
                   GL   G+      ++D R+   L      VD+  + G L  A  L+     K 
Sbjct: 1149 -----NSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKP 1203

Query: 427  TAEFNAILSG 436
             A     L G
Sbjct: 1204 DATIWGALLG 1213


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 180/557 (32%), Positives = 306/557 (54%), Gaps = 43/557 (7%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A +VF  +   +    N M   +  + +   A  ++V ++S    PN +TF  ++  C +
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER---------------- 316
           +   +EG+Q+HG  +K G   ++ V  ++++MY ++G  E+A++                
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 317 ---------------MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
                          MFD I  ++++SW A+ISGY  +G+  KA+  F E +   +  D 
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           S +ATV+  C+   ++ELG Q+H +   HG+ S++++  AL+D+Y+K G++++A  LL+G
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            S K    +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   A    + 
Sbjct: 268 LSNKDVISWNTLIGGYTH--MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 325

Query: 482 RGRSLHAYSIKTGYAADVIVGNA------LITMYAKCGSIDGAFQIFKGIS-DRDIVSWN 534
            GR +H Y  K      V+V NA      LI MYAKCG ID A Q+    + +R + +WN
Sbjct: 326 IGRWIHVYIDKK--LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWN 383

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM+  +A+HG    A  +F  M++ G  PDDI+ +G+L AC +SG+ + G  +F  + Q 
Sbjct: 384 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQD 443

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           Y + P LEH+ CM+DLLG +G   EA  +IN+ P     ++W +L+   K+  N +    
Sbjct: 444 YNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGES 503

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA-GCSWIEIDSKL 713
            +K+L+ +EP++ GS++L+SN+YA  G  +E  K+RT +ND  + K+  GCS IEIDS +
Sbjct: 504 FAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVV 563

Query: 714 HHFVASGKDHPESEEIY 730
           H F+   K HP++ EIY
Sbjct: 564 HEFIIGDKLHPQNREIY 580



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 227/483 (46%), Gaps = 44/483 (9%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           L   F+ L  A  +F+ +   + + W  + +G+    D  S L +   M       N  T
Sbjct: 18  LSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFT 77

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF---- 217
              +L++C+  +    G+QIH   +K GF+ +++V TSLISMY  +G   +A+ VF    
Sbjct: 78  FPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSS 137

Query: 218 ----------------RG-----------LAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
                           RG           +  KDV   N MI  Y + G  + A  +F  
Sbjct: 138 HRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKE 197

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++ ++ +P++ T   V+S C ++  +E G+Q+H      G    + + NA++ +Y K G 
Sbjct: 198 MMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A  + + +S +++ISW  LI GY       +A+  F E L  G   +   + +++  
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 317

Query: 371 CSVCSNLELGLQLHGF---AIKHGYLSDV-RLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           C+    +++G  +H +    +K   +++   L T+L+D+YAK GD+ +A  + D  +   
Sbjct: 318 CAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNR 377

Query: 427 T-AEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           + + +NA++ GF M   A+   D+   FS+ R  G+EPD +TF  LLS  +    L  GR
Sbjct: 378 SLSTWNAMIFGFAMHGRANAAFDI---FSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 434

Query: 485 SLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYA 541
           ++   S++  Y     + +   +I +    G    A ++   +  + D V W ++L A  
Sbjct: 435 NIFR-SMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACK 493

Query: 542 LHG 544
           +HG
Sbjct: 494 IHG 496



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 161/359 (44%), Gaps = 36/359 (10%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD------- 110
           F  +P L+K    S   K GQ +H  +LK G   D +   +LI++YA+  RL+       
Sbjct: 75  FFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFD 134

Query: 111 ------------------------VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGI 146
                                    AQK+FD + ++  ++W ++I GY + G+Y+  L +
Sbjct: 135 RSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALEL 194

Query: 147 ACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH 206
             +M ++  K +E T + ++ AC+       G Q+H++    GF +N+ +  +LI +Y  
Sbjct: 195 FKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSK 254

Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV 266
            G    A  +  GL+ KDV   N +I  Y      + A  +F  +L S   PND T  ++
Sbjct: 255 CGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 314

Query: 267 ISVCYENLGVEEGKQLHGLAVK----FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  C     ++ G+ +H    K      V    S+  +++ MY K G  + A ++ D+ +
Sbjct: 315 LPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSA 374

Query: 323 -ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
             R+L +W A+I G+   G    A + F      GI  D      ++  CS    L+LG
Sbjct: 375 FNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 433



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 7/272 (2%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG ++LG+ VH+++   G  ++    N LI+LY+K   ++ A +L +G+  +  I+W +L
Sbjct: 220 SGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTL 279

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-- 188
           I GY     Y+  L +  +M RS E  N+ T   IL AC+ L     G  IH +  K   
Sbjct: 280 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLK 339

Query: 189 --GFENNVFVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAF 245
                N   + TSLI MY   G    A  V    A+ + +   N MI  +   G +  AF
Sbjct: 340 GVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAF 399

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTM 304
            +F  +  +  EP+D TF  ++S C  +  ++ G+ +   +   + +  ++     ++ +
Sbjct: 400 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDL 459

Query: 305 YGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
            G  G+ +EAE M + +  E + + W +L+  
Sbjct: 460 LGHSGLFKEAEEMINTMPMEPDGVIWCSLLKA 491


>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 197/596 (33%), Positives = 308/596 (51%), Gaps = 15/596 (2%)

Query: 151 YRSEEKF--NEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GF---------ENNVFVGT 198
           Y    KF  N+   S +L  C        G  +HA  IK+ GF          N + V  
Sbjct: 34  YSETSKFAINQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWN 93

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD-FE 257
           SL+SMY   G  R+A  VF  +  KD    N  I      G+ EM F VF  L  S  ++
Sbjct: 94  SLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQ 153

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
            +  T T V++ C +       K +H L   +G  REI+VGNA++T Y + G      R+
Sbjct: 154 FDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRV 213

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD +SE+N+++WTA+ISG  +     +++  F +  D  +  +S    + +  CS    +
Sbjct: 214 FDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAI 273

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
             G Q+HG   K G   D+ + +AL+D+Y+K G L+ A  + +            IL G 
Sbjct: 274 REGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGL 333

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +     EE+ + +F +    G+  DP   S +L +      L  G+ +H+  IK  + +
Sbjct: 334 AQN--GFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGS 391

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           +  V N LI MY+KCG +D + +IF  +  R+ VSWN+M++A+A HG G  AL L+EEM+
Sbjct: 392 NYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMR 451

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
            EG  P D++ L +L AC + GL E G+     + + YG+ P +EH+AC+VD++GRAG L
Sbjct: 452 LEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLL 511

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
           +EA   I   P     L+W+ L+    +  NS+    A+ +L    P+    +IL++N+Y
Sbjct: 512 NEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIY 571

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           + +G   E A+    M D+ ++KE G SWIEI+ ++H FV   + HP +E IY  L
Sbjct: 572 SSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVL 627



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 242/486 (49%), Gaps = 15/486 (3%)

Query: 72  GDLKLGQAVHAFLLKS-----GSQNDTFEA-----NNLINLYAKFNRLDVAQKLFDGMLV 121
           G L LG ++HA ++K+     G+  D         N+L+++Y++   L  A K+FD M +
Sbjct: 58  GYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDATKVFDHMPM 117

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGEQ 180
           +  I+W S I G L +GD E    +   +Y S   +F++ T + +L AC   E     + 
Sbjct: 118 KDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKM 177

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH+     G+E  + VG +LI+ YF  GC      VF  ++ K+V     +I   ++   
Sbjct: 178 IHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQF 237

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E +  +F  +     +PN  T+ + +  C     + EG+Q+HGL  K GV  ++ + +A
Sbjct: 238 YEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESA 297

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K G  E+A ++F++  E + +S T ++ G  ++G   ++I  F++ +  G+  D
Sbjct: 298 LMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVID 357

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            + ++ ++    + ++L LG Q+H   IK  + S+  +   L+++Y+K GDL  +  +  
Sbjct: 358 PNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFC 417

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               + +  +N++++ F      +    + L+ + RL G+ P  VTF  LL   A    +
Sbjct: 418 WMPQRNSVSWNSMIAAFARH--GNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLV 475

Query: 481 VRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD-IVSWNAMLS 538
            +G   L + +   G    +     ++ M  + G ++ A +  + + ++  I+ W A+L 
Sbjct: 476 EKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLG 535

Query: 539 AYALHG 544
           A ++HG
Sbjct: 536 ACSIHG 541


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 215/730 (29%), Positives = 370/730 (50%), Gaps = 14/730 (1%)

Query: 19  SLP-PLKKKVPINTFSP---NPKSQVAYLCSISSVSCSERTLLFND---WPQLVKISIGS 71
           SLP P      IN+F+    +  SQ A+   +++ +   +T + +D   +P L+K     
Sbjct: 23  SLPHPSSASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSL 82

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
               LG ++H  +L SG   D + A++LIN YAKF   DVA+K+FD M  R+ + WTS+I
Sbjct: 83  NLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSII 142

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y   G       +  +M R   + +  T   +L   S L      + +H  AI  GF 
Sbjct: 143 GCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV---QCLHGSAILYGFM 199

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +++ +  S++SMY        +  +F  +  +D+   N ++  Y + G       +   +
Sbjct: 200 SDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTM 259

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
               FEP+  TF +V+SV      ++ G+ LHG  ++     +  V  +++ MY K G  
Sbjct: 260 RIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNI 319

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           + A RMF+   +++++ WTA+ISG V++G   KA+  F + L  G+   ++ +A+VI  C
Sbjct: 320 DIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITAC 379

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +   +  LG  +HG+  +H    D+    +LV ++AK G L  + ++ D  + +    +N
Sbjct: 380 AQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWN 439

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+++G+ +         + LF++ R     PD +T   LL   AS   L  G+ +H++ I
Sbjct: 440 AMITGYAQN--GYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVI 497

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           + G    ++V  +L+ MY KCG +D A + F  +   D+VSW+A++  Y  HG G+ AL 
Sbjct: 498 RNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALR 557

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
            + +    G  P+ +  L VL +C ++GL E G+ ++  + + +G+ P LEH AC+VDLL
Sbjct: 558 FYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLL 617

Query: 612 GRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
            RAGR+ EA NL     FS+  L +   ++   +   N++     +  +L L+P DAG+F
Sbjct: 618 SRAGRVEEAYNLYKKK-FSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNF 676

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           + +++ YA     +E  +  T M  L L K  G S+I+I   +  F      HP+ +EI 
Sbjct: 677 VQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIV 736

Query: 731 SKLDLLNDEM 740
             L  L  EM
Sbjct: 737 CTLKFLRKEM 746


>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 704

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 216/695 (31%), Positives = 352/695 (50%), Gaps = 10/695 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEA----NNLINLYAKFNRLDVAQKLFDGM 119
           L+K       LK  + +HA +L + +     ++    NNLI +YA       AQKLFD M
Sbjct: 10  LIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLFDRM 69

Query: 120 LVRSAITWTSLIKGYLDDGDYESV-LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
             ++AI++ +LI  Y  D  YE++   +  DM     + N  T + +L+ C LLED   G
Sbjct: 70  PRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLEDWFLG 129

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H   ++ G+ N++ V T L+ MY   G    A  VF     KD    N MI  Y K 
Sbjct: 130 STLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGYLKN 189

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              + +  +F  ++ S      +T +  ++ C +     +G+ +H   +   ++ + ++ 
Sbjct: 190 DRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSALQ 249

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA++ MY   G    A  +F  I   +LISW ++IS + ++  G KA+  F++ L +  C
Sbjct: 250 NALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMSTC 309

Query: 359 -CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D      +I         + G  LH   IK G    V +G AL+ +Y +  D+++AR 
Sbjct: 310 KPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAARG 369

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +      K    +  ++ G       D E  + LF + R  G + D    S  LS+ A  
Sbjct: 370 VFSLMEEKDVVLWTEMIMGHCR--LGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADL 427

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L +G+ LH  ++KTG  A++ V  +L+ MYAK G++  A  IF  + + D+  WN+M+
Sbjct: 428 AILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSMI 487

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             Y+ HG+ + A++LF E+   G  PD ++ L +L AC +SGL E G  L++ +++  G+
Sbjct: 488 GGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKK-NGI 546

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILAS 656
            P  +H++CMV LL RAG L EA  LI  S  SE  L LWRTL+S      N      A+
Sbjct: 547 TPGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLSSCVNRRNLTVGARAA 606

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           K++L L+P+D+ ++IL+SN+YA  G  D  A++R  +  L L K+ G SWIE  + +H F
Sbjct: 607 KQVLRLDPEDSATYILLSNLYAVTGRWDGVAELRKKIRGLMLEKDPGVSWIEAKNDIHVF 666

Query: 717 VASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFE 751
            +  + +P  +E  +++  L   M   V D   F+
Sbjct: 667 SSDDQSNPVIDEAQAEVRRLQRNMIRSVTDEYEFD 701



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 5/217 (2%)

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAI----KHGYLSDVRLGTALVDIYAKGGDLKSARML 418
           CL  +I  C+  ++L+   QLH   +       Y     L   L+ +YA  G    A+ L
Sbjct: 6   CLEALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKL 65

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D    K    +NA+++ +    +  E     LFS   +  + P+  TF+ LL +     
Sbjct: 66  FDRMPRKNAISYNALIAAYCRD-SSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLE 124

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
               G +LH   ++ GY  D+ V   L+ MY+ CG ++ A ++F    ++D V WN+M+S
Sbjct: 125 DWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMIS 184

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            Y  +   K +L LF EM R G      +    L AC
Sbjct: 185 GYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNAC 221


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 194/605 (32%), Positives = 339/605 (56%), Gaps = 13/605 (2%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACS 170
           A+KLFD +   S  +W ++I+ Y + G     LG+   M  S  ++ + +T   +++AC 
Sbjct: 75  ARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACG 134

Query: 171 --LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
             LL +   G  IHA  + SGF+++ FV  SL++MY + G    A  VF  +  + +   
Sbjct: 135 DYLLPE--MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSW 192

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N MI  Y K G  + A  VF  ++    EP+  T  +V+ VC     +E G+++H L   
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEV 252

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI-- 346
             +  +ISV N+++ MY K G  +EA+ +F  + +R+++SWT +++GY+ +G    A+  
Sbjct: 253 KNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLL 312

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
              ++F  +    +   LA+V+  C+   +L+ G  LHG+AI+    S+V + TAL+D+Y
Sbjct: 313 CQMMQFESVKP--NFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMY 370

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
           AK  ++  +  +    S + TA +NAI+SG +          + LF Q  +  ++P+  T
Sbjct: 371 AKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHN--GLSRKAIELFKQMLMEAVDPNDAT 428

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI- 525
            + LL   A    L + R++H Y I++G+ + + V   LI +Y+KCGS++ A  IF GI 
Sbjct: 429 LNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIP 488

Query: 526 -SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
             D+DI++W+A+++ Y +HG G+ A+ LF++M + G  P++I+   +L AC ++GL + G
Sbjct: 489 KKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEG 548

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
           + LF  + +   +    +H+ C++DLLGRAGRL EA  LI +  F  +  +W  L+    
Sbjct: 549 LGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCV 608

Query: 645 LMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
           +  N +   +A+K L +LEP + G+++L++N+Y+  G   +A  VR  MN++ L K    
Sbjct: 609 IHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAH 668

Query: 705 SWIEI 709
           S IE+
Sbjct: 669 SLIEV 673



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 245/488 (50%), Gaps = 20/488 (4%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVF---VGTSLISMYFHSGCFREAENVFRGLA 221
           +L+ C+  +     +QIHA  I  G  ++ +   + +SL + Y   GC   A  +F  L 
Sbjct: 24  LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELR 83

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE-PNDYTFTNVISVCYENLGVEEGK 280
              +   N MI  Y  +G S  A  +FV +L+S    P++YT+  VI  C + L  E G 
Sbjct: 84  NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGA 143

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +H   V  G   +  V N+++ MY   G  E A R+FD + ER L+SW  +I+GY ++G
Sbjct: 144 LIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +A+  F   +  GI  D + + +V+  CS    LE+G ++H          D+ +  
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           +L+D+YAK G++  A+M+      +    +  +++G++  +  D    ++L    +   +
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYI--LNGDARSALLLCQMMQFESV 321

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +P+ VT + +LS  AS   L  GR LH ++I+    ++VIV  ALI MYAKC +++ +F+
Sbjct: 322 KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFR 381

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F   S +    WNA++S    +GL + A+ LF++M  E   P+D ++  +L A  Y+ L
Sbjct: 382 VFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA--YAFL 439

Query: 581 SEGGICLFNEIEQIY------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           ++       +   ++      G    +E    ++D+  + G L  A N+ N  P  +  +
Sbjct: 440 TD-----LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDI 494

Query: 635 L-WRTLVS 641
           + W  +++
Sbjct: 495 ITWSAIIA 502



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 237/479 (49%), Gaps = 18/479 (3%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           ++G  +HA  + SG  +D F  N+L+ +Y     ++VA+++FD M  R+ ++W ++I GY
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
             +G  +  L +   M     + +  T   +L  CS L++   G ++HA         ++
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            V  SL+ MY   G   EA+ +F  +  +DV     M+  Y   G++  A  +   +   
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
             +PN  T  +V+S C     ++ G+ LHG A++  +  E+ V  A++ MY K      +
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            R+F   S++    W A+ISG + +G   KAI  F + L   +  + + L +++   +  
Sbjct: 380 FRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFL 439

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT--AEFNA 432
           ++L+    +HG+ I+ G+LS + + T L+DIY+K G L+SA  + +G   K      ++A
Sbjct: 440 TDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSA 499

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY--- 489
           I++G+   +    E  + LF Q   +G++P+ +TF+ +L   +    +  G  L  +   
Sbjct: 500 IIAGY--GMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE 557

Query: 490 ----SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
               S++T +   V      I +  + G ++ A+++ + ++ R +   W A+L +  +H
Sbjct: 558 DNQMSLRTDHYTCV------IDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIH 610



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 178/352 (50%), Gaps = 7/352 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L++G+ VHA +       D    N+L+++YAK   +D AQ +F  M  R  ++WT+++ 
Sbjct: 239 ELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMN 298

Query: 133 GYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           GY+ +GD  S L + C M + E  K N  T + +L AC+ L     G  +H +AI+   E
Sbjct: 299 GYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLE 357

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           + V V T+LI MY        +  VF   + +     N +I      G S  A  +F  +
Sbjct: 358 SEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQM 417

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           L    +PND T  +++        +++ + +HG  ++ G +  I V   ++ +Y K G  
Sbjct: 418 LMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSL 477

Query: 312 EEAERMFDAI--SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           E A  +F+ I   ++++I+W+A+I+GY   GHG  AI+ F + +  G+  +     +++ 
Sbjct: 478 ESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILH 537

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLL 419
            CS    ++ GL L  F ++   +S +R    T ++D+  + G L+ A  L+
Sbjct: 538 ACSHAGLVDEGLGLFKFMLEDNQMS-LRTDHYTCVIDLLGRAGRLEEAYELI 588


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 196/681 (28%), Positives = 354/681 (51%), Gaps = 12/681 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  V++  L S S       N  + ++ +F  L  A  +F  M  R+  +W  L+ GY  
Sbjct: 113 GSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK 172

Query: 137 DGDYESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            G ++  + +   M +    K + +T   +L  C  + D   G+++H   ++ G+E ++ 
Sbjct: 173 QGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDID 232

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  +LI+MY   G  + A  +F  +  +D+   N MI  Y + G       +F  +    
Sbjct: 233 VVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS 292

Query: 256 FEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
            +P+  T T+VIS C E LG    G+ +H   +  G   +ISV N++  MY   G   EA
Sbjct: 293 VDPDLMTLTSVISAC-ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
           E++F  +  ++++SWT +ISGY  +    KAI+ +       +  D   +A V+  C+  
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
            +L+ G++LH  AIK   +S V +   L+++Y+K   +  A  +      K    + +I+
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G   ++ +   + ++   Q ++  ++P+ +T +  L+  A    L+ G+ +HA+ ++TG
Sbjct: 472 AGL--RLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
              D  + NAL+ MY +CG ++ A+  F     +D+ SWN +L+ Y+  G G   + LF+
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFD 587

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
            M +    PD+I+ + +L  C  S +   G+  F+++E  YG+ P L+H+AC+VDLLGRA
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRA 646

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G L EA   I   P +  P +W  L++  ++        L+++ + +L+ K  G +IL+ 
Sbjct: 647 GELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLC 706

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           N+YA  G   E AKVR  M +  L+ +AGCSW+E+  K+H F++  K HP+++EI + L+
Sbjct: 707 NLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766

Query: 735 LLNDEMK----LKVKDSSAFE 751
              ++M      K+ +SS+ +
Sbjct: 767 GFYEKMSEVGLTKISESSSMD 787



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 233/485 (48%), Gaps = 9/485 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++   G  DL  G+ VH  +++ G + D    N LI +Y K   +  A+ LFD M  
Sbjct: 200 PCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPR 259

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  I+W ++I GY ++G     L +   M       +  T + ++ AC LL DR  G  I
Sbjct: 260 RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI 319

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA+ I +GF  ++ V  SL  MY ++G +REAE +F  +  KD+     MI  Y      
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLP 379

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A   +  +     +P++ T   V+S C     ++ G +LH LA+K  ++  + V N +
Sbjct: 380 DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K    ++A  +F  I  +N+ISWT++I+G   +    +A+  FL  + + +  ++
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI-FLRQMKMTLQPNA 498

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             L   +  C+    L  G ++H   ++ G   D  L  AL+D+Y + G + +A    + 
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS 558

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    +N +L+G+ E+       V+ LF +   + + PD +TF  LL    S++ +V
Sbjct: 559 QK-KDVTSWNILLTGYSER--GQGSMVVELFDRMVKSRVRPDEITFISLLC-GCSKSQMV 614

Query: 482 RGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
           R + L  +S    Y     + +   ++ +  + G +  A +  + +    D   W A+L+
Sbjct: 615 R-QGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673

Query: 539 AYALH 543
           A  +H
Sbjct: 674 ACRIH 678



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 168/325 (51%), Gaps = 3/325 (0%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
            F  ++ +C      EEG +++ +A+       + +GNA + M+ + G   +A  +F  +
Sbjct: 96  VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELG 380
           SERNL SW  L+ GY + G+  +A+  +   L + G+  D      V+  C    +L  G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            ++H   +++GY  D+ +  AL+ +Y K GD+KSAR+L D    +    +NA++SG+ E 
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
               E   + LF   R   ++PD +T + ++S          GR +HAY I TG+A D+ 
Sbjct: 276 GMCHEG--LELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           V N+L  MY   GS   A ++F  +  +DIVSW  M+S Y  + L   A+  +  M ++ 
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393

Query: 561 FAPDDISILGVLQACIYSGLSEGGI 585
             PD+I++  VL AC   G  + G+
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGV 418



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 18/229 (7%)

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
           EE + +L S Q L  +  D   F  L+ L   +     G  +++ ++ +  +  V +GNA
Sbjct: 76  EEAMKLLNSMQELR-VAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR-EGFAP 563
            + M+ + G++  A+ +F  +S+R++ SWN ++  YA  G    A+ L+  M    G  P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQI------YGLRPILEHFACMVDLLGRAGRL 617
           D  +   VL+ C       GGI      +++      YG    ++    ++ +  + G +
Sbjct: 195 DVYTFPCVLRTC-------GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247

Query: 618 SEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEP 664
             A  L +  P     + W  ++S      M +    +  + R L ++P
Sbjct: 248 KSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 179/494 (36%), Positives = 284/494 (57%), Gaps = 9/494 (1%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           T++ +I  C     V+EGK++H      G   ++ V N ++ MY K  + EEAE +FD +
Sbjct: 57  TYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEM 116

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
            ERN++SWT +IS Y  +    KA+   +     G+  +    ++V+  C    NL    
Sbjct: 117 PERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR--- 172

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           QLH   IK G  SDV + +AL+D+Y+K  DL +A  + D    +    +N+I+ GF +  
Sbjct: 173 QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQN- 231

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
             D  + + LF + + AG   D  T + +L      A L  GR +H + +K  +  D+I+
Sbjct: 232 -SDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLIL 288

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            NALI MY KCGS++ A   F  + ++D++SW+ M++  A +G  + AL LFE MK  G 
Sbjct: 289 NNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGS 348

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            P+ I++LGVL AC ++GL E G   F  +++++G+ P  EH+ C++DLLGRAGRL EA+
Sbjct: 349 RPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAV 408

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
            LI+        + WRTL+   ++  N   +I A+K++++LEP+DAG++IL+SN+YA   
Sbjct: 409 KLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQ 468

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLLNDEM 740
             ++ A+VR TM +  + K  GCSWIE+D ++H F+     HP+ EEI  +L DL+   M
Sbjct: 469 RWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVM 528

Query: 741 KLKVKDSSAFELQD 754
            +     + F LQD
Sbjct: 529 GVGYVPDTNFVLQD 542



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 202/423 (47%), Gaps = 22/423 (5%)

Query: 10  LQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFND---WPQLVK 66
           ++PP +      PL     +N F+ N   Q     ++ ++   ER  +F D   + +L+K
Sbjct: 10  MKPPLRYVADPSPL-----VNEFA-NFCHQWDLHRAMRAMDAMERHGVFADAITYSELIK 63

Query: 67  ISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
                G ++ G+ VH  +   G +   F  N L+N+Y KFN L+ A+ LFD M  R+ ++
Sbjct: 64  CCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVS 123

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           WT++I  Y +  + +  L     M+R   + N  T S +L AC  L +     Q+H   I
Sbjct: 124 WTTMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGII 179

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K+G E++VFV ++LI +Y        A  VF  +  +D+   N +I  + +  +   A +
Sbjct: 180 KTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALN 239

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F  +  + F  +  T T+V+  C     +E G+Q+H   +KF   +++ + NA++ MY 
Sbjct: 240 LFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFD--QDLILNNALIDMYC 297

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  E+A   F  + E+++ISW+ +++G  ++G+  +A+  F    + G   +   +  
Sbjct: 298 KCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLG 357

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT----ALVDIYAKGGDLKSARMLLDGF 422
           V+  CS    +E G        K   L  V  G      L+D+  + G L  A  L+   
Sbjct: 358 VLFACSHAGLVEKGWYYFRSMKK---LFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEM 414

Query: 423 SCK 425
            C+
Sbjct: 415 ECE 417



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 14/288 (4%)

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D+   + +I  CS    ++ G ++H      GY   + +   L+++Y K   L+ A
Sbjct: 50  GVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEA 109

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             L D    +    +  ++S +  K+ D     ++L  ++   G+ P+  T+S +L    
Sbjct: 110 EDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFRE---GVRPNMFTYSSVL---- 162

Query: 476 SQAC--LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +AC  L   R LH   IKTG  +DV V +ALI +Y+K   +D A  +F  +  RD+V W
Sbjct: 163 -RACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVW 221

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           N+++  +A +  G  AL LF+ MKR GF  D  ++  VL+AC    L E G  +   + +
Sbjct: 222 NSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK 281

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            +    IL +   ++D+  + G L +A N   S    +  + W T+V+
Sbjct: 282 -FDQDLILNN--ALIDMYCKCGSLEDA-NSAFSRMVEKDVISWSTMVA 325



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 4/258 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +H  ++K+G ++D F  + LI++Y+K++ LD A  +FD M  R  + W S+I G+  +
Sbjct: 172 RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQN 231

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
            D    L +   M R+    ++ T + +L AC+ L     G Q+H   +K  F+ ++ + 
Sbjct: 232 SDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILN 289

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +LI MY   G   +A + F  +  KDV   + M+    + G S  A  +F  +  S   
Sbjct: 290 NALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSR 349

Query: 258 PNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           PN  T   V+  C     VE+G      +   FGV         ++ + G+ G  +EA +
Sbjct: 350 PNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVK 409

Query: 317 MFDAIS-ERNLISWTALI 333
           +   +  E + ++W  L+
Sbjct: 410 LIHEMECEPDSVTWRTLL 427


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 194/666 (29%), Positives = 343/666 (51%), Gaps = 3/666 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VH  +   G + +     +LI +YA+   +  AQ++F+ +  +    WT +I  Y  
Sbjct: 24  GRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQ 83

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            GDY+  LG+   M   +    + T   IL AC+  E    G +IH   ++ GFE +VFV
Sbjct: 84  QGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFV 143

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GT+LI+MY   G  R A + F+ L ++DV     MI    +  +  +A  ++  +     
Sbjct: 144 GTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGV 203

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN  T   V +   +   + EGK ++ L     +  ++ V N+ + M+G  G+  +A R
Sbjct: 204 VPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARR 263

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F+ + +R++++W  +I+ YV++ + G+A+  F      GI  +      +++  +  ++
Sbjct: 264 LFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTS 323

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G  +H    + GY  DV + TAL+ +Y +      A  +      K    +  +   
Sbjct: 324 LAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVA 383

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           + +      ++ + LF + +L G  P   T   +L   A  A L +GR +H++ I+ G+ 
Sbjct: 384 YAQN--GFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFR 441

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +++V  ALI MY KCG +  A  +F+ ++ RDI+ WN+ML AYA HG     L LF +M
Sbjct: 442 MEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQM 501

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           + +G   D +S + VL A  +SG    G   F  + Q + + P  E + C+VDLLGRAGR
Sbjct: 502 QLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGR 561

Query: 617 LSEAMNLI-NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           + EA++++   S      +LW TL+   +    +  +  A++++L+ +P  +G+++++SN
Sbjct: 562 IQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSN 621

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +YA  G  D   ++R  M    + KE G S IEI +++H F+   + HP    IY++LD+
Sbjct: 622 VYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDV 681

Query: 736 LNDEMK 741
           LN EM+
Sbjct: 682 LNSEMR 687



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 250/511 (48%), Gaps = 7/511 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ CS  ++   G ++H      GFE N  V   LI MY   G   EA+ VF  L  KD
Sbjct: 11  LLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD 70

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     MI  Y + G+ + A  +F  +   D  P   T+  +++ C     +++G ++HG
Sbjct: 71  VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHG 130

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             ++ G   ++ VG A++ MY K G    A   F  +  R+++SWTA+I+  V+      
Sbjct: 131 QILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL 190

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A   +      G+  +   L TV +       L  G  ++         SDVR+  + ++
Sbjct: 191 ARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMN 250

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           ++   G L  AR L +    +    +N +++ +++   ++  + + LF + +  G++ + 
Sbjct: 251 MFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQN--ENFGEAVRLFGRLQQDGIKAND 308

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           +TF  +L++  S   L +G+ +H    + GY  DV+V  AL+++Y +C +   A++IF  
Sbjct: 309 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVD 368

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEG 583
           +  +D+++W  M  AYA +G  K AL LF+EM+ EG  P   +++ VL  C + + L +G
Sbjct: 369 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 428

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
                + IE  + +  ++E    ++++ G+ G+++EA ++          L+W +++   
Sbjct: 429 RQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAY 485

Query: 644 KLMANSKFSI-LASKRLLDLEPKDAGSFILV 673
                   ++ L ++  LD E  DA SF+ V
Sbjct: 486 AQHGYYDETLQLFNQMQLDGEKADAVSFVSV 516



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 192/399 (48%), Gaps = 2/399 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK G  +H  +L+ G + D F    LIN+Y K   +  A   F  +  R  ++WT++I  
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            +    +     +   M       N+ T   +  A         G+ I++       E++
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD 241

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V V  S ++M+ ++G   +A  +F  +  +DV   N +I  Y +      A  +F  L  
Sbjct: 242 VRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQ 301

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              + ND TF  +++V      + +GK +H L  + G  R++ V  A++++YG+     +
Sbjct: 302 DGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQ 361

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++F  +  +++I+WT +   Y ++G   +A+  F E    G    S+ L  V+D C+ 
Sbjct: 362 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 421

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + L+ G Q+H   I++G+  ++ + TAL+++Y K G +  AR + +  + +    +N++
Sbjct: 422 LAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSM 481

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           L  + +    DE   + LF+Q +L G + D V+F  +LS
Sbjct: 482 LGAYAQHGYYDE--TLQLFNQMQLDGEKADAVSFVSVLS 518



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 162/326 (49%), Gaps = 4/326 (1%)

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           F+P+   F  ++  C     V+ G+++H      G  +   V   ++ MY + G   EA+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++F+ +  +++ +WT +I  Y + G   +A+  F +  +  +         +++ C+   
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +L+ G+++HG  ++ G+  DV +GTAL+++Y K G ++ A         +    + A+++
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
             ++   D       L+ + +L G+ P+ +T   + +       L  G+ +++       
Sbjct: 181 ACVQH--DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVM 238

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +DV V N+ + M+   G +  A ++F+ + DRD+V+WN +++ Y  +     A+ LF  
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR 298

Query: 556 MKREGFAPDDISILGVLQACIYSGLS 581
           ++++G   +DI+   VL   +Y+ L+
Sbjct: 299 LQQDGIKANDITF--VLMLNVYTSLT 322



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 162/347 (46%), Gaps = 9/347 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ +++ +     ++D    N+ +N++     L  A++LF+ M+ R  +TW  +I  
Sbjct: 223 LSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITF 282

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+ + ++   + +   + +   K N+ T  ++L   + L     G+ IH    ++G++ +
Sbjct: 283 YVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 342

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V V T+L+S+Y       +A  +F  +  KDV     M + Y + G  + A  +F  +  
Sbjct: 343 VVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQL 402

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P   T   V+  C     +++G+Q+H   ++ G   E+ V  A++ MYGK G   E
Sbjct: 403 EGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAE 462

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F+ +++R+++ W +++  Y + G+  + +  F +    G   D+    +V+   S 
Sbjct: 463 ARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSH 522

Query: 374 CSNLELGLQ-----LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
             ++  G Q     L  F+I         L   +VD+  + G ++ A
Sbjct: 523 SGSVTDGYQYFVAMLQDFSIT----PTPELYGCVVDLLGRAGRIQEA 565



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%)

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +PD   F  LL   +S   +  GR +H +    G+  + +V   LI MYA+CGS+  A Q
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F+ +  +D+ +W  M+  Y   G    AL +F +M+ E   P  ++ + +L AC  +  
Sbjct: 62  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121

Query: 581 SEGGICLFNEIEQ 593
            + G+ +  +I Q
Sbjct: 122 LKDGMEIHGQILQ 134


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 209/686 (30%), Positives = 347/686 (50%), Gaps = 12/686 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+  + +HA L+ S +  +   +  L+NLY     + +A+  FD +  R    W  +I 
Sbjct: 66  NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125

Query: 133 GYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           GY   G   E +   +  M  S  + +  T   +L+AC  + D   G +IH  A+K GF 
Sbjct: 126 GYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFM 182

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +V+V  SLI +Y   G    A  +F  +  +D+   N MI  Y ++G ++ A  +   L
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGL 242

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            + D      T  +++S C E      G  +H  ++K G+  E+ V N ++ +Y + G  
Sbjct: 243 RAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSL 298

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           ++ +++FD +  R+LISW ++I  Y  +    +AI  F E     I  D   L ++    
Sbjct: 299 KDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASIL 358

Query: 372 SVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           S    +     + GF ++ G+ L D+ +G A+V +YAK G + SAR + +    K    +
Sbjct: 359 SQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISW 418

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N I+SG+ +     E   M    ++    +  +  T+  +L   +    L +G  LH   
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRL 478

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +K G   DV VG +L  MY KCG +D A  +F  I   + V WN +++ +  HG G+ A+
Sbjct: 479 LKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 538

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
           +LF+EM  EG  PD I+ + +L AC +SGL + G   F  ++  YG+ P L+H+ CMVDL
Sbjct: 539 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDL 598

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
            GRAG+L  A+N I S P      +W  L+S  ++  N     +AS+ L ++EP+  G  
Sbjct: 599 YGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 658

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           +L+SNMYA  G  +   ++R+  +   L K  G S +E+D+K+  F    + HP  EE+Y
Sbjct: 659 VLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMY 718

Query: 731 SKLDLLNDEMKL--KVKDSSAFELQD 754
            +L  L++++K+   V D   F LQD
Sbjct: 719 RELTALHEKLKMVGYVPDHR-FVLQD 743



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 197/413 (47%), Gaps = 21/413 (5%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +GD   G  +H++ +K G +++ F +N LI+LYA+F  L   QK+FD M VR  I+W S+
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSI 319

Query: 131 IKGY-LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE-----QIHAF 184
           IK Y L++    ++L +  +M  S  + +   C  ++   S+L     GE      +  F
Sbjct: 320 IKAYELNEQPLRAIL-LFQEMRLSRIQPD---CLTLISLASILSQ--LGEIRACRSVQGF 373

Query: 185 AIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            ++ G F  ++ +G +++ MY   G    A  VF  L  KDV   N +I  Y + G +  
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASE 433

Query: 244 AFHVF--VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           A  ++  +     +   N  T+ +V+  C +   + +G +LHG  +K G+  ++ VG ++
Sbjct: 434 AIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSL 493

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
             MYGK G  ++A  +F  I   N + W  LI+ +   GHG KA+  F E LD G+  D 
Sbjct: 494 ADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 553

Query: 362 SCLATVIDGCSVCSNLELG-LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
               T++  CS    ++ G          +G    ++    +VD+Y + G L+ A   + 
Sbjct: 554 ITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIK 613

Query: 421 GFSCKYTAE-FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
               +  A  + A+LS        D   +    + + L  +EP+ V +  LLS
Sbjct: 614 SMPLQPDASIWGALLSACRVHGNVDLGKI----ASEHLFEVEPEHVGYHVLLS 662



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 18/296 (6%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           C+NL+    LH   +    + +V +   LV++Y   G++  AR   D    +    +N +
Sbjct: 64  CTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLM 123

Query: 434 LSGFMEKIADDEEDVMVLFSQQRL-AGMEPDPVTFSRLLSLSASQAC--LVRGRSLHAYS 490
           +SG+    A    +V+  FS   L +G++PD  TF  +L     +AC  +  G  +H  +
Sbjct: 124 ISGYGR--AGYSSEVIRCFSLFMLSSGLQPDYRTFPSVL-----KACRNVTDGNKIHCLA 176

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +K G+  DV V  +LI +Y + G++  A  +F  +  RD+ SWNAM+S Y   G  K AL
Sbjct: 177 LKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL 236

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            L + ++    A D ++++ +L AC  +G    G+ + +     +GL   L     ++DL
Sbjct: 237 TLSDGLR----AMDSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDL 291

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL--ASKRLLDLEP 664
               G L +   + +   +    + W +++   +L      +IL     RL  ++P
Sbjct: 292 YAEFGSLKDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQP 346



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 52/110 (47%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++     +G L+ G  +H  LLK+G   D F   +L ++Y K  RLD A  LF  + 
Sbjct: 455 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP 514

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
             +++ W +LI  +   G  E  + +  +M     K +  T   +L ACS
Sbjct: 515 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 564


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 188/590 (31%), Positives = 321/590 (54%), Gaps = 42/590 (7%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYF---HSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           IHA  IK+G  N  +  + L+       H   F  A +VF  +   ++   N M   +  
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           + +   A  +++ ++S    P+ YTF  ++  C ++   +EG+Q+HG  +K G   +I V
Sbjct: 67  SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA------------ 345
             ++++MY ++G  E+A ++FD  S R+++S+TALI+GYV  G+   A            
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186

Query: 346 ------INGFLE--------------FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
                 I+G++E               +   +  D S + TV+  C+   ++ELG  +H 
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
           +   HG+ S++++  AL+D+Y+K G++++A  L DG   K    +N ++ G+     +  
Sbjct: 247 WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTH--MNLY 304

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT--GYAADVI-VG 502
           ++ ++LF +   +G  P+ VT   +L   A    +  GR +H Y  K   G   +V  + 
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364

Query: 503 NALITMYAKCGSIDGAFQIF-KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            +LI MYAKCG ID A Q+F   +S+R + +WNAM+S +A+HG    A  +F  M+  G 
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGI 424

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            PDDI+ +G+L AC +SG+ + G  +F  + + Y + P LEH+ CM+DLLG +G   EA 
Sbjct: 425 EPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAE 484

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
            +IN+ P     ++W +L+   K+  N +     +K+L+ +EP ++GS++L+SN+YA  G
Sbjct: 485 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAG 544

Query: 682 MLDEAAKVRTTMNDLRLSKEA-GCSWIEIDSKLHHFVASGKDHPESEEIY 730
             +E AK+R  +ND  + K+  GCS IEIDS +H F+   K HP++ EIY
Sbjct: 545 RWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 594



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 244/510 (47%), Gaps = 47/510 (9%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLIN---LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + +HA ++K+G  N  +  + L+    +   F+    A  +FD +   + + W ++ +G+
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
               D  S L +   M       + +T   +L++C+  + R  G+QIH   +K GF+ ++
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124

Query: 195 FVGTSLISMYFHSGCFREAENVF--------------------RG-----------LAYK 223
           +V TSLISMY  +G   +A  VF                    RG           +  K
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVH-LLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           DV   N MI  Y + G  + A  +F   ++ ++  P++ T   V+S C ++  +E G+ +
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H      G    + + NA++ +Y K G  E A  +FD +  +++ISW  LI GY      
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLY 304

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK--HGYLSDV-RLG 399
            +A+  F E L  G   +   + +++  C+    +++G  +H +  K   G +++V  L 
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364

Query: 400 TALVDIYAKGGDLKSARMLLD-GFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRL 457
           T+L+D+YAK GD+ +A+ + D   S +  + +NA++SGF M   A+   D+   FS+ R+
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDI---FSRMRM 421

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSI 515
            G+EPD +TF  LLS  +    L  GR++   S+  GY     + +   +I +    G  
Sbjct: 422 NGIEPDDITFVGLLSACSHSGMLDLGRNIFR-SMTRGYEITPKLEHYGCMIDLLGHSGLF 480

Query: 516 DGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
             A ++   +  + D V W ++L A  +HG
Sbjct: 481 KEAEEMINTMPMEPDGVIWCSLLKACKIHG 510



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 182/398 (45%), Gaps = 39/398 (9%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD---------- 110
           +P L+K    S   K GQ +H  +LK G   D +   +LI++YA+  RL+          
Sbjct: 92  FPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISS 151

Query: 111 ---------------------VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
                                 AQKLFD +  +  ++W ++I GY++ G+Y+  L +  +
Sbjct: 152 HRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKE 211

Query: 150 MYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG 208
           M   +  + +E T   ++ AC+  +    G  +H++    GF +N+ +  +LI +Y   G
Sbjct: 212 MMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFG 271

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
               A  +F GL  KDV   N +I  Y      + A  +F  +L S   PND T  +++ 
Sbjct: 272 EVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 331

Query: 269 VCYENLGVEEGKQLHGLAVK--FGVVREI-SVGNAIVTMYGKHGMSEEAERMFD-AISER 324
            C     ++ G+ +H    K   GVV  + S+  +++ MY K G  + A+++FD ++S R
Sbjct: 332 ACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNR 391

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           +L +W A+ISG+   G    A + F      GI  D      ++  CS    L+LG  + 
Sbjct: 392 SLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIF 451

Query: 385 GFAIKHGYLSDVRLGT--ALVDIYAKGGDLKSARMLLD 420
             ++  GY    +L     ++D+    G  K A  +++
Sbjct: 452 R-SMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMIN 488



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 136/269 (50%), Gaps = 6/269 (2%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  ++LG+ VH+++   G  ++    N LI+LY+KF  ++ A +LFDG+  +  I+W +L
Sbjct: 235 SDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTL 294

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK--S 188
           I GY     Y+  L +  +M RS E  N+ T   IL AC+ L     G  IH +  K   
Sbjct: 295 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLK 354

Query: 189 GFENNV-FVGTSLISMYFHSGCFREAENVF-RGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           G   NV  + TSLI MY   G    A+ VF   ++ + +   N MI  +   G +  AF 
Sbjct: 355 GVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFD 414

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMY 305
           +F  +  +  EP+D TF  ++S C  +  ++ G+ +   +   + +  ++     ++ + 
Sbjct: 415 IFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLL 474

Query: 306 GKHGMSEEAERMFDAIS-ERNLISWTALI 333
           G  G+ +EAE M + +  E + + W +L+
Sbjct: 475 GHSGLFKEAEEMINTMPMEPDGVIWCSLL 503



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 14/216 (6%)

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG---AFQIFKGISDRDIVSWNAMLSAY 540
           R +HA  IKTG        + L+         DG   A  +F  I + +++ WN M   +
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           AL      AL L+  M   G  PD  +   +L++C  S + + G  +   + ++     I
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN--SKFSILASKR 658
             H   ++ +  + GRL +A  + + S         R +VS + L+A   S+  I ++++
Sbjct: 125 YVH-TSLISMYAQNGRLEDARKVFDISSH-------RDVVSYTALIAGYVSRGYIESAQK 176

Query: 659 LLDLEP-KDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           L D  P KD  S+  + + Y   G   EA ++   M
Sbjct: 177 LFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEM 212


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 184/580 (31%), Positives = 311/580 (53%), Gaps = 6/580 (1%)

Query: 180 QIHAFAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           Q+HA A++ G    + F   +L+  Y   G  R+A   F  + ++DV   N M+    + 
Sbjct: 89  QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
             +  A  +F  ++      +  T ++V+ +C           +H  AVK G+  E+ V 
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVC 208

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA++ +YGK GM EE  ++FD +S R+L++W ++ISG+ + G    A+  F    D G+ 
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVS 268

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARM 417
            D   L ++    + C ++  G  +H + ++ G+ + D+  G A+VD+YAK   +++A+ 
Sbjct: 269 PDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQR 328

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    +    +N +++G+M+      E + V    Q+  G++P   TF  +L   +  
Sbjct: 329 MFDSMPVRDAVSWNTLITGYMQN-GLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHL 387

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L +G  +HA SIKTG   DV VG  +I +YAKCG +D A  +F+    R    WNA++
Sbjct: 388 GALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVI 447

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           S   +HG G  AL LF +M++EG +PD ++ + +L AC ++GL + G   FN ++  YG+
Sbjct: 448 SGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGI 507

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
           +PI +H+ACMVD+ GRAG+L +A + I + P      +W  L+   ++  N +   +AS+
Sbjct: 508 KPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQ 567

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            L +L+PK+ G ++L+SNMYA  G  D   +VR+ +    L K  G S IE+   ++ F 
Sbjct: 568 NLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFY 627

Query: 718 ASGK--DHPESEEIYSK-LDLLNDEMKLKVKDSSAFELQD 754
           +  +   HP+ EEI  + LDLL     L      +F LQD
Sbjct: 628 SGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQD 667



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 239/490 (48%), Gaps = 12/490 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           +P L++ + G G       +HA  L+ G  + D F +  L++ Y +F R+  A + FD M
Sbjct: 74  FPPLLRAAQGPGT---AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEM 130

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             R    W +++ G   +      +G+   M       +  T S +L  C LL DR    
Sbjct: 131 RHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALAL 190

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            +H +A+K G ++ +FV  ++I +Y   G   E   VF G++ +D+   N +I  + + G
Sbjct: 191 AMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGG 250

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVG 298
           +   A  +F  +  S   P+  T  ++ S   +   +  G+ +H   V+ G  V +I  G
Sbjct: 251 QVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAG 310

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GI 357
           NAIV MY K    E A+RMFD++  R+ +SW  LI+GY+++G   +AI+ +       G+
Sbjct: 311 NAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGL 370

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
                   +V+   S    L+ G ++H  +IK G   DV +GT ++D+YAK G L  A +
Sbjct: 371 KPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAML 430

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L +    + T  +NA++SG    +       + LFSQ +  G+ PD VTF  LL+  +  
Sbjct: 431 LFEQTPRRSTGPWNAVISGV--GVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHA 488

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWN 534
             + +GR+     ++T Y    I  +   ++ M+ + G +D AF   + +  + D   W 
Sbjct: 489 GLVDQGRNFFNM-MQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWG 547

Query: 535 AMLSAYALHG 544
           A+L A  +HG
Sbjct: 548 ALLGACRIHG 557


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 193/666 (28%), Positives = 342/666 (51%), Gaps = 3/666 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VH  +   G + +     +LI +YA+   +  AQ++F+ +  +    WT +I  Y  
Sbjct: 23  GRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQ 82

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            GDY+  LG+   M   +    + T   IL AC+  E    G +IH   ++ GFE +VFV
Sbjct: 83  QGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFV 142

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GT+LI+MY   G  R A + F+ L ++DV     MI    +  +  +A  ++  +     
Sbjct: 143 GTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGV 202

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            PN  T   V +   +   + EGK ++GL     +  ++ V N+ V M+G  G+  +A R
Sbjct: 203 VPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARR 262

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F+ + +R++++W  +I+ YV++ + G+A+  F      G+  +      +++  +  ++
Sbjct: 263 LFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTS 322

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G  +H    + GY  D  + TAL+ +Y +      A  +      K    +  +   
Sbjct: 323 LAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVA 382

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           + +      ++ + LF + +L G  P   T   +L   A  A L +GR +H++ I+  + 
Sbjct: 383 YAQN--GFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFR 440

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +++V  ALI MY KCG +  A  +F+ ++ RDI+ WN+ML AYA HG     L LF +M
Sbjct: 441 MEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQM 500

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           + +G   D +S + VL A  +SG    G   F  + Q + + P  E + C+VDLLGRAGR
Sbjct: 501 QLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGR 560

Query: 617 LSEAMNLI-NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           + EA++++   S      +LW TL+   +    +  +  A++++L+ +P  +G+++++SN
Sbjct: 561 IQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSN 620

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +YA  G  D   ++R  M    + KE G S IEI +++H F+   + HP    IY++LD+
Sbjct: 621 VYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDV 680

Query: 736 LNDEMK 741
           LN EM+
Sbjct: 681 LNSEMR 686



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 251/511 (49%), Gaps = 7/511 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ CS  ++   G ++H      GFE N  V   LI MY   G   EA+ VF  L  KD
Sbjct: 10  LLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD 69

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     MI  Y + G+ + A  +F  +   D  P   T+  +++ C     +++G ++HG
Sbjct: 70  VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHG 129

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             ++ G   ++ VG A++ MY K G    A   F  +  R+++SWTA+I+  V+      
Sbjct: 130 QILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL 189

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A   +      G+  +   L TV +     + L  G  ++G        SDVR+  + V+
Sbjct: 190 ARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVN 249

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           ++   G L  AR L +    +    +N +++ +++   ++  + + LF + +  G++ + 
Sbjct: 250 MFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQN--ENFGEAVRLFGRLQQDGVKAND 307

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           +TF  +L++  S   L +G+ +H    + GY  D +V  AL+++Y +C +   A++IF  
Sbjct: 308 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVD 367

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEG 583
           +  +D+++W  M  AYA +G  K AL LF+EM+ EG  P   +++ VL  C + + L +G
Sbjct: 368 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 427

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
                + IE  + +  ++E    ++++ G+ G+++EAM++          L+W +++   
Sbjct: 428 RQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRDILVWNSMLGAY 484

Query: 644 KLMANSKFSI-LASKRLLDLEPKDAGSFILV 673
                   ++ L ++  LD    DA SF+ V
Sbjct: 485 AQHGYYDETLQLFNQMQLDGVKADAVSFVSV 515



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 189/399 (47%), Gaps = 2/399 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK G  +H  +L+ G + D F    LIN+Y K   +  A   F  +  R  ++WT++I  
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            +    +     +   M       N+ T   +  A         G+ ++        E++
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V V  S ++M+ ++G   +A  +F  +  +DV   N +I  Y +      A  +F  L  
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              + ND TF  +++V      + +GK +H L  + G  R+  V  A++++YG+     +
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ 360

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++F  +  +++I+WT +   Y ++G   +A+  F E    G    S+ L  V+D C+ 
Sbjct: 361 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 420

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + L+ G Q+H   I++ +  ++ + TAL+++Y K G +  A  + +  + +    +N++
Sbjct: 421 LAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSM 480

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           L  + +    DE   + LF+Q +L G++ D V+F  +LS
Sbjct: 481 LGAYAQHGYYDE--TLQLFNQMQLDGVKADAVSFVSVLS 517



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/325 (21%), Positives = 160/325 (49%), Gaps = 4/325 (1%)

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +P+   F  ++  C     V+ G+++H      G  +   V   ++ MY + G   EA++
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F+ +  +++ +WT +I  Y + G   +A+  F +  +  +         +++ C+   +
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L+ G+++HG  ++ G+  DV +GTAL+++Y K G ++ A         +    + A+++ 
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
            ++   D       L+ + +L G+ P+ +T   + +       L  G+ ++         
Sbjct: 181 CVQH--DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVME 238

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           +DV V N+ + M+   G +  A ++F+ + DRD+V+WN +++ Y  +     A+ LF  +
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRL 298

Query: 557 KREGFAPDDISILGVLQACIYSGLS 581
           +++G   +DI+   VL   +Y+ L+
Sbjct: 299 QQDGVKANDITF--VLMLNVYTSLT 321



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 160/347 (46%), Gaps = 9/347 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ V+  +     ++D    N+ +N++     L  A++LF+ M+ R  +TW  +I  
Sbjct: 222 LSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITL 281

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+ + ++   + +   + +   K N+ T  ++L   + L     G+ IH    ++G++ +
Sbjct: 282 YVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 341

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             V T+L+S+Y       +A  +F  +  KDV     M + Y + G  + A  +F  +  
Sbjct: 342 AVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQL 401

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P   T   V+  C     +++G+Q+H   ++     E+ V  A++ MYGK G   E
Sbjct: 402 EGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAE 461

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F+ +++R+++ W +++  Y + G+  + +  F +    G+  D+    +V+   S 
Sbjct: 462 AMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSH 521

Query: 374 CSNLELGLQ-----LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
             ++  G Q     L  F+I         L   +VD+  + G ++ A
Sbjct: 522 SGSVTDGYQYFVAMLQDFSIT----PTPELYGCVVDLLGRAGRIQEA 564



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%)

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +PD   F  LL   +S   +  GR +H +    G+  + +V   LI MYA+CGS+  A Q
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F+ +  +D+ +W  M+  Y   G    AL +F +M+ E   P  ++ + +L AC  +  
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 581 SEGGICLFNEIEQ 593
            + G+ +  +I Q
Sbjct: 121 LKDGMEIHGQILQ 133


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 191/608 (31%), Positives = 312/608 (51%), Gaps = 43/608 (7%)

Query: 160 HTCSVILEACSLLED-RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF---REAEN 215
           H    +L  C  L+  RI    IHA  IK+G  N  +  + L+     S  F     A +
Sbjct: 3   HPSLSLLHXCKTLQSLRI----IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAIS 58

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +    +   N M   +  + +   A  ++V ++S    PN YTF  ++  C ++  
Sbjct: 59  VFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXA 118

Query: 276 VEEGKQLHGLAVKFGV-------------------------------VREISVGNAIVTM 304
            +EG+QLHG  +KFG                                 R++    A++T 
Sbjct: 119 FKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITG 178

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y   G  E A +MFD I  ++++SW A ISGY  +G+  +A+  F + +   +  D S +
Sbjct: 179 YASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTM 238

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
            TV+  C+   ++ELG Q+H +   HG+  ++++  AL+D+Y+K G+L++A  L  G S 
Sbjct: 239 VTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSN 298

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    +N ++ G+     +  ++ ++LF     +G +P+ VT   +LS  A    +  GR
Sbjct: 299 KDVISWNTLIGGYTH--MNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGR 356

Query: 485 SLHAYSIK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
            +H Y  K   G      +  +LI MYAKCG I+ A Q+F  + +R + SWNAM+  +A+
Sbjct: 357 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAM 416

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG    A  +F  M++ G  PDDI+ +G+L AC +SG+ + G  +F  + + Y L P LE
Sbjct: 417 HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLE 476

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ CM+DL G +G   EA  +IN+       ++W +L+   K+  N +     ++ L+ +
Sbjct: 477 HYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKI 536

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EP++ GS++L+SN+YA     +E AK R  +ND  + K  GCS IEIDS +H F+   K 
Sbjct: 537 EPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF 596

Query: 723 HPESEEIY 730
           HP + EIY
Sbjct: 597 HPRNREIY 604



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 234/507 (46%), Gaps = 44/507 (8%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLIN---LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + +HA ++K+G  N  +  + L+    L   F+ L  A  +FD +     + W ++ +G+
Sbjct: 19  RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
               D  S L +   M       N +T   +L++C+       G+Q+H   +K GF+ ++
Sbjct: 79  ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDL 138

Query: 195 FVGTSLISMYFHSGCFREAENV-------------------------------FRGLAYK 223
           ++ TSLISMY  +G   +A+ V                               F  +  K
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV   N  I  Y + G  + A  +F  ++ ++  P++ T   V+S C ++  +E G+Q+H
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
                 G    + + NA++ +Y K G  E A  +F  +S +++ISW  LI GY       
Sbjct: 259 SWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYK 318

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTA 401
           +A+  F + L  G   +   + +++  C+    +++G  +H +  K   G  +   L T+
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGM 460
           L+D+YAK GD+++A+ + D    +  + +NA++ GF M   A+   D+   FS+ R  G+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDI---FSRMRKNGI 435

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGA 518
           EPD +TF  LLS  +    L  GR +   S+   Y     + +   +I +    G    A
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFR-SMTRDYKLMPKLEHYGCMIDLXGHSGLFKEA 494

Query: 519 FQIFKGIS-DRDIVSWNAMLSAYALHG 544
            ++   +  + D V W ++L A  +HG
Sbjct: 495 EKMINTMEMEPDGVIWCSLLKACKMHG 521



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 190/428 (44%), Gaps = 43/428 (10%)

Query: 30  NTFSPNPKSQVA-YLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLK 86
           +  S +P S +  Y+C +S        LL N +  P L+K    S   K GQ +H  +LK
Sbjct: 78  HALSSDPVSALKLYVCMVS------LGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLK 131

Query: 87  SGSQNDTFEANNLINLYAKFNRLDVAQK-------------------------------L 115
            G   D +   +LI++Y +  RL+ AQK                               +
Sbjct: 132 FGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKM 191

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FD + V+  ++W + I GY + G+Y+  L +   M ++  + +E T   +L AC+     
Sbjct: 192 FDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSI 251

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G Q+H++    GF  N+ +  +LI +Y   G    A  +F+GL+ KDV   N +I  Y
Sbjct: 252 ELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGY 311

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
                 + A  +F  +L S  +PND T  +++S C     ++ G+ +H    K   GV  
Sbjct: 312 THMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTN 371

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             S+  +++ MY K G  E A+++FD++  R+L SW A+I G+   G    A + F    
Sbjct: 372 ASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMR 431

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
             GI  D      ++  CS    L+LG  +       +  +  +     ++D+    G  
Sbjct: 432 KNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLF 491

Query: 413 KSARMLLD 420
           K A  +++
Sbjct: 492 KEAEKMIN 499


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 195/666 (29%), Positives = 349/666 (52%), Gaps = 8/666 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  V++  L S +       N  + ++ +F  L  A  +F  M  R+  +W  L+ GY  
Sbjct: 113 GSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK 172

Query: 137 DGDYESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            G ++  + +   M +    K + +T   +L  C  + D   G ++H   ++ G+E ++ 
Sbjct: 173 QGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDID 232

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  +LI+MY   G  + A  +F  +  +D+   N MI  Y + G       +F  +    
Sbjct: 233 VVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLS 292

Query: 256 FEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
            +P+  T T+VIS C E LG    G+ +H   +  G   +ISV N++  MY   G   EA
Sbjct: 293 VDPDLMTLTSVISAC-ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREA 351

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
           E++F  +  ++++SWT +ISGY  +    KAI+ +       +  D   +A V+  C+  
Sbjct: 352 EKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
            +L+ G++LH  AIK   +S V +   L+++Y+K   +  A  +      K    + +I+
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G   ++ +   + ++ F Q ++  ++P+ +T +  L+  A    L+ G+ +HA+ ++TG
Sbjct: 472 AGL--RLNNRCFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
              D  + NAL+ MY +CG ++ A+  F     +D+ SWN +L+ Y+  G G   + LF+
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFD 587

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
            M +    PD+I+ + +L  C  S +   G+  F+++E+ YG+ P L+H+AC+VDLLGRA
Sbjct: 588 RMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEE-YGVTPNLKHYACVVDLLGRA 646

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G L EA   I   P +  P +W  L++  ++  N     L+++R+ +L+    G +IL+ 
Sbjct: 647 GELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLC 706

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           N+YA  G   E AKVR  M +  L+ +AGCSW+E+  K+H F++  K HP+++EI + LD
Sbjct: 707 NLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLD 766

Query: 735 LLNDEM 740
              ++M
Sbjct: 767 GFYEKM 772



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 169/325 (52%), Gaps = 3/325 (0%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
            F  ++ +C      EEG +++ +A+       + +GNA + M+ + G   +A  +F  +
Sbjct: 96  VFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKM 155

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELG 380
           SERNL SW  L+ GY + G+  +AI  +   L + G+  D      V+  C    +L  G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            ++H   +++GY  D+ +  AL+ +Y K GD+KSAR+L D    +    +NA++SG+ E 
Sbjct: 216 REVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
               E   + LF   R   ++PD +T + ++S          GR +HAY I TG+A D+ 
Sbjct: 276 GMGHEG--LKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           V N+L  MY   GS   A ++F  +  +DIVSW  M+S Y  + L + A+  +  M ++ 
Sbjct: 334 VCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDS 393

Query: 561 FAPDDISILGVLQACIYSGLSEGGI 585
             PD+I++  VL AC   G  + G+
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGV 418



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 227/483 (46%), Gaps = 5/483 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++   G  DL  G+ VH  +++ G + D    N LI +Y K   +  A+ LFD M  
Sbjct: 200 PCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPR 259

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  I+W ++I GY ++G     L +   M       +  T + ++ AC LL DR  G  I
Sbjct: 260 RDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI 319

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA+ I +GF  ++ V  SL  MY ++G +REAE +F  +  KD+     MI  Y      
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLP 379

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           E A   +  +     +P++ T   V+S C     ++ G +LH LA+K  ++  + V N +
Sbjct: 380 EKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K    ++A  +F  I  +N+ISWT++I+G   +    +A+  F   + + +  ++
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI-FFRQMKMTLQPNA 498

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             L   +  C+    L  G ++H   ++ G   D  L  AL+D+Y + G +  A    + 
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS 558

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K  + +N +L+G+ E+       V+ LF +   A + PD +TF  LL        + 
Sbjct: 559 QK-KDVSSWNILLTGYSER--GQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVR 615

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAY 540
           +G    +   + G   ++     ++ +  + G +  A +  + +    D   W A+L+A 
Sbjct: 616 QGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675

Query: 541 ALH 543
            +H
Sbjct: 676 RIH 678



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 18/229 (7%)

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
           EE + +L S Q L  +  D   F  L+ L   +     G  +++ ++ +  +  V +GNA
Sbjct: 76  EEAMKLLNSMQELR-VAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNA 134

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR-EGFAP 563
            + M+ + G++  A+ +F  +S+R++ SWN ++  YA  G    A+ L+  M    G  P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP 194

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQI------YGLRPILEHFACMVDLLGRAGRL 617
           D  +   VL+ C       GGI       ++      YG    ++    ++ +  + G +
Sbjct: 195 DVYTFPCVLRTC-------GGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDV 247

Query: 618 SEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEP 664
             A  L +  P     + W  ++S      M +    +  + R L ++P
Sbjct: 248 KSARLLFDRMP-RRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDP 295


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 196/643 (30%), Positives = 339/643 (52%), Gaps = 7/643 (1%)

Query: 77  GQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           G  +HA  L+ G    D F  N L+  YA   R   A+++FD M  R  ++W SL+   L
Sbjct: 130 GAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALL 189

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            +G  E        M RS    N  +   ++ AC    D  FG  +H   +KSG ++ V 
Sbjct: 190 TNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVN 249

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +G +L+ MY   G    +  VF G+  K+    N  +  +  AG  E    +F  +   +
Sbjct: 250 LGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHE 309

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P   T ++++    +      GK++HG +++  +  +I + N+++ MY K G  E+A 
Sbjct: 310 VTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKAS 369

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F+ I  RN++SW A+I+   ++G   +A +  +E    G C +S  L  ++  CS  +
Sbjct: 370 AIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVA 429

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           ++++G Q+H ++I    +SD+ +  AL+D+YAK G L  A+ + D  S K    +N ++ 
Sbjct: 430 SVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIV 488

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+ +     E   + LF Q R AG+E D V+F   LS  A+ +   +G+ +H   ++   
Sbjct: 489 GYSQSQCCFES--LHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLL 546

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
                + N+L+ +Y K G +  A +IF  I+ +D+ SWN M+  Y +HG    A  LF+ 
Sbjct: 547 NTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDL 606

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNE-IEQIYGLRPILEHFACMVDLLGRA 614
           MK +G   D +S + VL AC + GL + G   F++ I Q   ++P   H+ACMVDLLGRA
Sbjct: 607 MKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ--NIKPQQMHYACMVDLLGRA 664

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G+LSE++ +I + PF  +  +W  L+   ++  + + + LA++ L +L+P+ +G + L+ 
Sbjct: 665 GQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLR 724

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           NMY+  GM +EA +++T M   ++ K    SW++  +KL  F+
Sbjct: 725 NMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFL 767



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 149/564 (26%), Positives = 263/564 (46%), Gaps = 15/564 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYAKFNRLDVAQKLF--DGMLVRSAITWT 128
           G+  L +  HA  L SG+   +   A  L+  YA    +  A+ +     + +RSA  W 
Sbjct: 16  GNSLLLRRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWN 75

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF-----GEQIHA 183
           SL +     G     L +   M RS  + ++ T    L A +            G ++HA
Sbjct: 76  SLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHA 135

Query: 184 FAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
            A++ G    +VF G +L++ Y   G   +A  VF  +  +D+   N ++      G  E
Sbjct: 136 AALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLE 195

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A    V ++ S    N  +  +V+  C        G  +HGL +K G+   +++GNA+V
Sbjct: 196 DAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALV 255

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MYGK G  E + R+F+ + E+N +SW + +  +  +G     +  F    +  +   S 
Sbjct: 256 DMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSV 315

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            L++++          LG ++HG++I+    SD+ +  +L+D+YAK G L+ A  + +  
Sbjct: 316 TLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENI 375

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             +    +NA+++   +  A+ E   +V+  Q+   G  P+  T   LL   +  A +  
Sbjct: 376 EGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKN--GECPNSFTLVNLLPACSRVASVKM 433

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +HA+SI     +D+ V NALI +YAKCG +  A  IF   S++D VS+N ++  Y+ 
Sbjct: 434 GKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQ 492

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLRPIL 601
                 +L LF++M+  G   D +S +G L AC   S   +G       + ++    P L
Sbjct: 493 SQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFL 552

Query: 602 EHFACMVDLLGRAGRLSEAMNLIN 625
            +   ++DL  + G L+ A  + N
Sbjct: 553 AN--SLLDLYTKGGMLATASKIFN 574



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 231/475 (48%), Gaps = 8/475 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D   G +VH  +LKSG  +     N L+++Y KF  L+ + ++F+GM  ++ ++W S + 
Sbjct: 228 DEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALG 287

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            +   G +E VL +   M   E      T S +L A   L     G+++H ++I+   E+
Sbjct: 288 CFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMES 347

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           ++F+  SL+ MY   GC  +A  +F  +  ++V   N MI    + G    AF + + + 
Sbjct: 348 DIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQ 407

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +   PN +T  N++  C     V+ GKQ+H  ++   ++ ++ V NA++ +Y K G   
Sbjct: 408 KNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLS 467

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A+ +FD  SE++ +S+  LI GY +S    ++++ F +    GI  D+      +  C+
Sbjct: 468 VAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACA 526

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             S  + G ++HG  ++    +   L  +L+D+Y KGG L +A  + +  + K  A +N 
Sbjct: 527 NLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNT 586

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++ G+   +    +    LF   +  G++ D V++  +LS  +    + RG+   +  I 
Sbjct: 587 MILGY--GMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIA 644

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGI---SDRDIVSWNAMLSAYALHG 544
                  +    ++ +  + G +  + +I   +   ++ D+  W A+L +  +HG
Sbjct: 645 QNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDV--WGALLGSCRIHG 697



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 170/351 (48%), Gaps = 5/351 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P LV +    G   LG+ VH + ++   ++D F AN+L+++YAKF  L+ A  +F+ +  
Sbjct: 322 PALVDL----GYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEG 377

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R+ ++W ++I     +G       +  +M ++ E  N  T   +L ACS +     G+QI
Sbjct: 378 RNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQI 437

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA++I     +++FV  +LI +Y   G    A+++F   + KD    N +I+ Y+++   
Sbjct: 438 HAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIF-DRSEKDDVSYNTLIVGYSQSQCC 496

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             + H+F  + S+  E +  +F   +S C      ++GK++HG+ V+  +     + N++
Sbjct: 497 FESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSL 556

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + +Y K GM   A ++F+ I+ +++ SW  +I GY   G    A   F    D G+  D 
Sbjct: 557 LDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDH 616

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
                V+  CS    ++ G +     I             +VD+  + G L
Sbjct: 617 VSYIAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQL 667


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 180/625 (28%), Positives = 323/625 (51%), Gaps = 17/625 (2%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           A  +F+ M       W  +I+GY ++G ++  +     M     + +  T   +++AC  
Sbjct: 77  ALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGE 136

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
           L   + G+++H   IK GF+ +V+V   LI MY   G    AE VF  +  +D+   N M
Sbjct: 137 LLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSM 196

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           +  Y   G+   +   F  +L    + + +   + +  C     +  G ++H   ++  +
Sbjct: 197 VSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSEL 256

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
             +I V  +++ MYGK G  + AER+F+ I  +N+++W A+I G                
Sbjct: 257 ELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQE------------- 303

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
             D  +  D   +  ++  CS    L  G  +HGFAI+  +L  + L TALVD+Y K G+
Sbjct: 304 --DDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGE 361

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           LK A  + +  + K    +N +++ +++   +  ++ + +F       ++PD +T + +L
Sbjct: 362 LKLAEHVFNQMNEKNMVSWNTMVAAYVQN--EQYKEALKMFQHILNEPLKPDAITIASVL 419

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
              A  A    G+ +H+Y +K G  ++  + NA++ MYAKCG +  A + F G+  +D+V
Sbjct: 420 PAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVV 479

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           SWN M+ AYA+HG G+ ++  F EM+ +GF P+  + + +L AC  SGL + G   FN +
Sbjct: 480 SWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSM 539

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
           +  YG+ P +EH+ CM+DLLGR G L EA   I   P   +  +W +L++ S+   +   
Sbjct: 540 KVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVL 599

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
           + LA++ +L L+  + G ++L+SNMYA  G  ++  +++  M +  L K  GCS ++I+ 
Sbjct: 600 AELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDING 659

Query: 712 KLHHFVASGKDHPESEEIYSKLDLL 736
           +   F+   + H  +  IY  LD+L
Sbjct: 660 RSESFINQDRSHAHTNLIYDVLDIL 684



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 207/410 (50%), Gaps = 22/410 (5%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L +GQ VH  L+K G   D +  N LI++Y K   +++A+K+FD M VR  ++W S++ G
Sbjct: 140 LMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSG 199

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  DGD  S L    +M R   K +       L ACS+      G +IH   I+S  E +
Sbjct: 200 YQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELD 259

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + V TSLI MY   G    AE VF  +  K++   N MI      G  E           
Sbjct: 260 IMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMI-----GGMQE----------D 304

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+  T  N++  C ++  + EGK +HG A++   +  + +  A+V MYGK G  + 
Sbjct: 305 DKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKL 364

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           AE +F+ ++E+N++SW  +++ YV++    +A+  F   L+  +  D+  +A+V+   + 
Sbjct: 365 AEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAE 424

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            ++   G Q+H + +K G  S+  +  A+V +YAK GDL++AR   DG  CK    +N +
Sbjct: 425 LASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTM 484

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
           +  +   I       +  FS+ R  G +P+  TF  LL+     AC + G
Sbjct: 485 IMAY--AIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLT-----ACSISG 527



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 187/371 (50%), Gaps = 17/371 (4%)

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           +  SG    A ++F  + + D    N +I  Y   G  + A   +  +       +++TF
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
             VI  C E L +  G+++HG  +K G   ++ V N ++ MY K G  E AE++FD +  
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           R+L+SW +++SGY   G G  ++  F E L LG   D   + + +  CS+   L  G+++
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           H   I+     D+ + T+L+D+Y K G +  A  + +    K    +NA++ G  E   D
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQE---D 304

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
           D+              + PD +T   LL   +    L+ G+S+H ++I+  +   +++  
Sbjct: 305 DK--------------VIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLET 350

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           AL+ MY KCG +  A  +F  ++++++VSWN M++AY  +   K AL +F+ +  E   P
Sbjct: 351 ALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKP 410

Query: 564 DDISILGVLQA 574
           D I+I  VL A
Sbjct: 411 DAITIASVLPA 421


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 178/581 (30%), Positives = 305/581 (52%), Gaps = 35/581 (6%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N+F   +L+S   H+    + E +F  +  +D+   N +I  ++  G    A  V++ LL
Sbjct: 71  NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130

Query: 253 SSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG- 309
            +D    P+  T + ++           GKQ H   ++ G      VG+ +V MY K   
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190

Query: 310 ------------------------------MSEEAERMFDAISERNLISWTALISGYVRS 339
                                         M EEA R+F+ +++R+ I+WT +++G+ ++
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G   +A+  F      GI  D     +++  C   S LE G Q+H + I+  Y  +V +G
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVG 310

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           +ALVD+Y+K   +K A  +    +CK    + A++ G+ +      E+ + +FS+ +  G
Sbjct: 311 SALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGC--SEEAVRVFSEMQRDG 368

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           ++PD  T   ++S  A+ A L  G   H  ++ +G    + V NAL+T+Y KCGSI+ A 
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           ++F  +S  D VSW A++S YA  G  K  + LFE+M  +G  PD ++ +GVL AC  +G
Sbjct: 429 RLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG 488

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
             E G   F+ +++ +G+ PI +H+ CM+DL  R+G+L EA   I   P     + W TL
Sbjct: 489 FVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTL 548

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           +S  +L  + +    A++ LL+++P++  S++L+ +M+A +G  +E A++R  M D ++ 
Sbjct: 549 LSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVK 608

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           KE GCSWI+  +K+H F A  + HP S+ IY KL+ LN +M
Sbjct: 609 KEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKM 649



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 262/585 (44%), Gaps = 104/585 (17%)

Query: 40  VAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNL 99
           +A L + SSV  S  T+       +V  +   GD  LG+  H  +L+ G   + F  + L
Sbjct: 127 LALLQADSSVRPSRITM-----STMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPL 181

Query: 100 INLYAK----------FNRLDV---------------------AQKLFDGMLVRSAITWT 128
           +++YAK          F+ +D                      A++LF+ M  R +ITWT
Sbjct: 182 VDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWT 241

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           +++ G+  +G     L I   M       +++T   IL AC  L     G+QIHA+ I++
Sbjct: 242 TMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
            +++NVFVG++L+ MY      + AE VFR +  K++     +I+ Y + G SE A  VF
Sbjct: 302 RYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVF 361

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +     +P+DYT  +VIS C     +EEG Q H LA+  G++  I+V NA+VT+YGK 
Sbjct: 362 SEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKC 421

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  E+A R+FD +S  + +SWTAL+SGY + G   + I+ F + L  G+  D      V+
Sbjct: 422 GSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVL 481

Query: 369 DGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
             CS    +E G    H     HG +      T ++D+Y++ G LK A            
Sbjct: 482 SACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEA------------ 529

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG---- 483
                    F++++                  M PD + +  LLS     AC +RG    
Sbjct: 530 -------EEFIKQMP-----------------MHPDAIGWGTLLS-----ACRLRGDMEI 560

Query: 484 ---RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI-----VSWNA 535
               + +   I     A  ++   L +M+A  G  +   Q+ +G+ DR +      SW  
Sbjct: 561 GKWAAENLLEIDPQNPASYVL---LCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIK 617

Query: 536 MLSAYAL-------HGLGKGALLLFE----EMKREGFAPDDISIL 569
             +   +       H   KG     E    +M  EG+ PD  S+L
Sbjct: 618 YKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVL 662



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 223/494 (45%), Gaps = 40/494 (8%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F  N L++  A    L   + LF  M  R  +++ ++I G+   G +   + +   + ++
Sbjct: 73  FTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQA 132

Query: 154 EEKFNEH--TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH----- 206
           +        T S ++ A S L DR  G+Q H   ++ GF  N FVG+ L+ MY       
Sbjct: 133 DSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVG 192

Query: 207 ---------------------SGCFR-----EAENVFRGLAYKDVRCVNFMILEYNKAGE 240
                                +G  R     EA  +F  +  +D      M+  + + G 
Sbjct: 193 DAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGL 252

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A  +F  +       + YTF ++++ C     +E+GKQ+H   ++      + VG+A
Sbjct: 253 ESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSA 312

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V MY K    + AE +F  ++ +N+ISWTALI GY ++G   +A+  F E    GI  D
Sbjct: 313 LVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPD 372

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              L +VI  C+  ++LE G Q H  A+  G +  + +  ALV +Y K G ++ A  L D
Sbjct: 373 DYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFD 432

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             S      + A++SG+ +      ++ + LF +    G++PD VTF  +LS  +    +
Sbjct: 433 EMSFHDQVSWTALVSGYAQ--FGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFV 490

Query: 481 VRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
            +GRS  H+     G          +I +Y++ G +  A +  K +    D + W  +LS
Sbjct: 491 EKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLS 550

Query: 539 AYALHG---LGKGA 549
           A  L G   +GK A
Sbjct: 551 ACRLRGDMEIGKWA 564


>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 2000

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 224/745 (30%), Positives = 355/745 (47%), Gaps = 112/745 (15%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR---LDVAQKLFDG-- 118
           L+K     G ++ G A+HA L K+G  ++ + +  L+ +Y  + +    D   K FDG  
Sbjct: 27  LLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFD 86

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           ++V + +   ++ +G LD+                                     ++F 
Sbjct: 87  LVVHNCMISANVQRGNLDEAR-----------------------------------KLFD 111

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           E           + N    T+LIS +   G  RE+   F    +++V      I  Y + 
Sbjct: 112 EMP---------QTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQN 162

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISV 297
           G S  A  +F+ LL S+ +PN  TFT+V+  C  NLG    G  + GL VK G   +++V
Sbjct: 163 GFSVEAMKLFIKLLESEVKPNKVTFTSVVRAC-ANLGDFGLGMSVLGLIVKTGYEHDLAV 221

Query: 298 GNAIVTMYGKHG-----------MSE--------------------EAERMFDAISERNL 326
            N+++T+  + G           M E                    EA R+FD + +RN 
Sbjct: 222 SNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNE 281

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           +SW+A+I+ Y +SG+  +++  F   +  G   + SC ++++   +    L+ G+ +HG 
Sbjct: 282 VSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGH 341

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI-----LSGFMEKI 441
             K G+  DV + ++L+D+Y K G+ K  R L D    K    +NA+     L+G ME+ 
Sbjct: 342 VTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEA 401

Query: 442 A------------------------DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
                                    +  +++  +F++  L G  P+  TFS LL   AS 
Sbjct: 402 KYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACAST 461

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L +G++LH   +K G   D  VG AL  MYAK G I+ + ++F  +  ++ VSW AM+
Sbjct: 462 ASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMI 521

Query: 538 SAYALHGLGKGALLLFEEM-KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
              A  GL + +L LFEEM K    AP+++  L VL AC +SGL + G+  FN +E +YG
Sbjct: 522 QGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYG 581

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           L+P   HF C+VD+L RAGRL EA   I S PF      W  L+S  K   N + +   +
Sbjct: 582 LKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVA 641

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
            +L ++  K+   ++L+SN+YA  G   +  KVR  M    L K  GCSW+EI  ++H F
Sbjct: 642 GKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSF 701

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
            +    H +S EIY  L+LL  EMK
Sbjct: 702 YSEDGAHSQSAEIYEILELLGYEMK 726


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 211/790 (26%), Positives = 378/790 (47%), Gaps = 110/790 (13%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+LG  VHA L+ +G     F  + L+ +Y +   ++ A+++FD M  R+  +WT++++
Sbjct: 104 NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIME 163

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y   GDYE  + +   M     + +      + +ACS L++   G+ ++ + +  GFE 
Sbjct: 164 MYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEG 223

Query: 193 NVFVGTSLISMYFHSG-------CFREAE--NVF-----------RGLAYKDVRCV---- 228
           N  V  S++ M+   G        F E E  +VF           +G   K ++C+    
Sbjct: 224 NSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMK 283

Query: 229 -----------NFMILEYNKAGESEMA--------------------------------- 244
                      N +I  Y ++G+ E A                                 
Sbjct: 284 LSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYD 343

Query: 245 ---FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNA 300
                VF  ++    +PN  T  + +S C     +  G+++HG  +K   +  ++ VGN+
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI-------------- 346
           +V  Y K    E A R F  I + +L+SW A+++GY   G   +AI              
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463

Query: 347 --------NGFLEFLD-------------LGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
                    GF ++ D             +G+  +++ ++  +  C    NL+LG ++HG
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHG 523

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
           + +++       +G+AL+ +Y+    L+ A  +    S +    +N+I+S   +  +   
Sbjct: 524 YVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQ--SGRS 581

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
            + + L  +  L+ +E + VT    L   +  A L +G+ +H + I+ G      + N+L
Sbjct: 582 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSL 641

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           I MY +CGSI  + +IF  +  RD+VSWN M+S Y +HG G  A+ LF++ +  G  P+ 
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNH 701

Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
           I+   +L AC +SGL E G   F  ++  Y + P +E +ACMVDLL RAG+ +E +  I 
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761

Query: 626 SSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDE 685
             PF  +  +W +L+   ++  N   +  A++ L +LEP+ +G+++L++N+Y+  G  ++
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821

Query: 686 AAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK-LKV 744
           AAK+R  M +  ++K  GCSWIE+  KLH FV     HP  E+I +K++ L  ++K +  
Sbjct: 822 AAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 881

Query: 745 KDSSAFELQD 754
              + F LQD
Sbjct: 882 VPDTNFVLQD 891



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 197/436 (45%), Gaps = 34/436 (7%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           IL+ C  L +   G Q+HA  + +G +   F+G+ L+ +Y  +GC  +A  +F  ++ ++
Sbjct: 95  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     ++  Y   G+ E    +F  +++    P+ + F  V   C E      GK ++ 
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             +  G      V  +I+ M+ K G  + A R F+ I  +++  W  ++SGY   G   K
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+    +    G+  D      +I G +     E   +   + ++ G L D +       
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFE---EASKYFLEMGGLKDFKPN----- 326

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
                                    + A+++G  +   D E   + +F +  L G++P+ 
Sbjct: 327 ----------------------VVSWTALIAGSEQNGYDFE--ALSVFRKMVLEGVKPNS 362

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           +T +  +S   + + L  GR +H Y IK     +D++VGN+L+  YAKC S++ A + F 
Sbjct: 363 ITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFG 422

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            I   D+VSWNAML+ YAL G  + A+ L  EMK +G  PD I+  G++      G  + 
Sbjct: 423 MIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKA 482

Query: 584 GICLFNEIEQIYGLRP 599
            +  F  +  + G+ P
Sbjct: 483 ALEFFQRMHSM-GMDP 497


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 198/676 (29%), Positives = 348/676 (51%), Gaps = 28/676 (4%)

Query: 74  LKLGQAVHAFLLKSGSQN-------DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           L  G+ VH  L+ S S +       +T   N+LI +Y                  R+ ++
Sbjct: 60  LPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG-----------------RNPVS 102

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W S+I  ++ +G     LG+   M RS    ++      + AC+ L D   G Q+HA A+
Sbjct: 103 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 162

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           KS   +++ V  +L++MY  +G   +   +F  +  KD+     +I  + + G    A  
Sbjct: 163 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 222

Query: 247 VFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           VF  ++      PN++ F +    C      E G+Q+HGL++K+ + R++ VG ++  MY
Sbjct: 223 VFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 282

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            +    + A   F  I   +L+SW ++++ Y   G   +A+  F E  D G+  D   + 
Sbjct: 283 ARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 342

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            ++  C     L  G  +H + +K G   DV +  +L+ +YA+  DL SA  +      +
Sbjct: 343 GLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 402

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N+IL+   +   +  E+V+ LFS    +    D ++ + +LS SA        + 
Sbjct: 403 DVVTWNSILTACAQH--NHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQ 460

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHG 544
           +HAY+ K G   D ++ N LI  YAKCGS+D A ++F+ + ++RD+ SW++++  YA  G
Sbjct: 461 VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 520

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
             K A  LF  M+  G  P+ ++ +GVL AC   G    G   ++ +E  YG+ P  EH 
Sbjct: 521 YAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC 580

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
           +C+VDLL RAG+L+EA N I+  PF    ++W+TL++ SK+  + +    A++ +L+++P
Sbjct: 581 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 640

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
             + +++L+ N+YA  G  +E A+++  M    + K  G SW+++  +L  F+   + HP
Sbjct: 641 SHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHP 700

Query: 725 ESEEIYSKLDLLNDEM 740
           ESEEIY+ L+L+  EM
Sbjct: 701 ESEEIYAMLELIGMEM 716


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 189/640 (29%), Positives = 341/640 (53%), Gaps = 14/640 (2%)

Query: 103 YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC 162
           +A    ++ A +LFD M    A  W  +IKG+   G Y   +     M  +  K +  T 
Sbjct: 74  FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
             ++++ + +     G++IHA  IK GF ++V+V  SLIS+Y   GC  +AE VF  +  
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +D+   N MI  Y   G+   +  +F  +L   F+P+ ++  + +  C      + GK++
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253

Query: 283 HGLAVKFGV-VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           H  AV+  +   ++ V  +I+ MY K+G    AER+F+ + +RN+++W  +I  Y R+G 
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG- 312

Query: 342 GGKAINGFLEFLDL----GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
             +  + FL F  +    G+  D   + T I+     + LE G  +HG+A++ G+L  + 
Sbjct: 313 --RVTDAFLCFQKMSEQNGLQPD---VITSINLLPASAILE-GRTIHGYAMRRGFLPHMV 366

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           L TAL+D+Y + G LKSA ++ D  + K    +N+I++ +++         + LF +   
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQN--GKNYSALELFQELWD 424

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           + + PD  T + +L   A    L  GR +HAY +K+ Y ++ I+ N+L+ MYA CG ++ 
Sbjct: 425 SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLED 484

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A + F  I  +D+VSWN+++ AYA+HG G+ ++ LF EM      P+  +   +L AC  
Sbjct: 485 ARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSI 544

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           SG+ + G   F  +++ YG+ P +EH+ CM+DL+GR G  S A   +   PF  +  +W 
Sbjct: 545 SGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWG 604

Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
           +L++ S+   +   +  A++++  +E  + G ++L+ NMYA  G  ++  +++  M    
Sbjct: 605 SLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKG 664

Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           +S+ +  S +E   K H F    + H  + +IY  LD+++
Sbjct: 665 ISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS 704



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 222/425 (52%), Gaps = 13/425 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G   L+ G+ +HA ++K G  +D +  N+LI+LY K      A+K+F+ M 
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  ++W S+I GYL  GD  S L +  +M +   K +  +    L ACS +     G++
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252

Query: 181 IHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           IH  A++S  E  +V V TS++ MY   G    AE +F G+  +++   N MI  Y + G
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312

Query: 240 ESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
               AF  F  +   +  +P+  T  N++        + EG+ +HG A++ G +  + + 
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLPHMVLE 368

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A++ MYG+ G  + AE +FD ++E+N+ISW ++I+ YV++G    A+  F E  D  + 
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            DS+ +A+++   +   +L  G ++H + +K  Y S+  +  +LV +YA  GDL+ AR  
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +    K    +N+I+  +   +       + LFS+   + + P+  TF+ LL+     A
Sbjct: 489 FNHILLKDVVSWNSIIMAY--AVHGFGRISVWLFSEMIASRVNPNKSTFASLLA-----A 541

Query: 479 CLVRG 483
           C + G
Sbjct: 542 CSISG 546


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 189/634 (29%), Positives = 335/634 (52%), Gaps = 14/634 (2%)

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           ++ A +LFD M       W  +IKG+   G Y   L + C M  S  K +  T   ++++
Sbjct: 76  MEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKS 135

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
            + +     G++IHA  IK  F ++V+V  SLIS+Y   GC  +AE VF  +  +D+   
Sbjct: 136 VTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSW 195

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N MI  Y    +   +  +F  +L   F+P+ ++  + +  C        GK+LH  AV+
Sbjct: 196 NSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVR 255

Query: 289 FGV-VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
             +   ++ V  +I+ MY K+G    AER+F  I +RN+++W  LI  Y R+    +  +
Sbjct: 256 SRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNS---RVTD 312

Query: 348 GFLEFLDL----GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
            FL F  +    G+  D   L  ++  C++   LE G  +HG+A++ G+L  + L TAL+
Sbjct: 313 AFLCFQKMSEQNGLQPDVITLINLLPACAI---LE-GRTIHGYAMRRGFLPHIVLDTALI 368

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D+Y + G LKSA ++ D  + K    +N+I++ +++         + LF +   + + PD
Sbjct: 369 DMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQN--GKNYSALELFQKLWDSSLLPD 426

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
             T + +L   A    L  GR +HAY +K+ Y ++ I+ N+L+ MYA CG ++ A + F 
Sbjct: 427 STTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFN 486

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            +  +D+VSWN+++ AYA+HG G+ ++ LF EM      P+  +   +L AC  SG+ + 
Sbjct: 487 HVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDE 546

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
           G   F  +++ YG+ P +EH+  M+DL+GR G  S A   I   PF  +  +W +L++ S
Sbjct: 547 GWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNAS 606

Query: 644 KLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAG 703
           +   +   +  A++++  +E  + G ++L+ NMYA     ++  +++  M    +S+ + 
Sbjct: 607 RNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSS 666

Query: 704 CSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
            S +E  SK H      + H E+ +IY  LD+++
Sbjct: 667 RSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVS 700



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 220/425 (51%), Gaps = 13/425 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G   L+ G+ +HA ++K    +D +  N+LI+LY K      A+K+F+ M 
Sbjct: 129 YPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMP 188

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  ++W S+I GYL   D    L +  +M +   K +  +    L ACS +     G++
Sbjct: 189 ERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKE 248

Query: 181 IHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +H  A++S  E  +V V TS++ MY   G    AE +F+ +  +++   N +I  Y +  
Sbjct: 249 LHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNS 308

Query: 240 ESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
               AF  F  +   +  +P+  T  N++  C     + EG+ +HG A++ G +  I + 
Sbjct: 309 RVTDAFLCFQKMSEQNGLQPDVITLINLLPAC----AILEGRTIHGYAMRRGFLPHIVLD 364

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A++ MYG+ G  + AE +FD I+E+NLISW ++I+ YV++G    A+  F +  D  + 
Sbjct: 365 TALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLL 424

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            DS+ +A+++   +   +L  G Q+H + +K  Y S+  +  +LV +YA  GDL+ AR  
Sbjct: 425 PDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKC 484

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +    K    +N+I+  +   +       + LFS+   + ++P+  TF+ LL+     A
Sbjct: 485 FNHVLLKDVVSWNSIIMAY--AVHGFGRISVCLFSEMIASKVDPNKSTFASLLA-----A 537

Query: 479 CLVRG 483
           C + G
Sbjct: 538 CSISG 542



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 211/422 (50%), Gaps = 11/422 (2%)

Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV 266
           SG   +A  +F  +   D    N MI  +   G    A  ++  ++ S  + + +T+  V
Sbjct: 73  SGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFV 132

Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           I        +EEGK++H + +K   V ++ V N+++++Y K G S +AE++F+ + ER++
Sbjct: 133 IKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDI 192

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           +SW ++ISGY+    G +++  F E L  G   D     + +  CS   +  +G +LH  
Sbjct: 193 VSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCH 252

Query: 387 AIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
           A++    + DV + T+++D+Y+K G++  A  +      +    +N ++  +        
Sbjct: 253 AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARN--SRV 310

Query: 446 EDVMVLFSQ-QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
            D  + F +     G++PD +T   LL   A    ++ GR++H Y+++ G+   +++  A
Sbjct: 311 TDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLDTA 366

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           LI MY + G +  A  IF  I++++++SWN++++AY  +G    AL LF+++      PD
Sbjct: 367 LIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPD 426

Query: 565 DISILGVLQACIYS-GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
             +I  +L A   S  LSEG       ++  YG   I+     +V +    G L +A   
Sbjct: 427 STTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTII--LNSLVHMYAMCGDLEDARKC 484

Query: 624 IN 625
            N
Sbjct: 485 FN 486


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 196/675 (29%), Positives = 352/675 (52%), Gaps = 14/675 (2%)

Query: 73   DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR-SAITWTSLI 131
            D    +  H  + +SG   D    N +I++YAK      A  +F  +  +   I+W +++
Sbjct: 350  DFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTML 409

Query: 132  KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI---KS 188
                D   +  V+     M  +    N+ +   IL ACS  E   FG +IH+  +   + 
Sbjct: 410  GASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRD 469

Query: 189  GFENNVFVGTSLISMYFHSGCFREAENVFR--GLAYKDVRCVNFMILEYNKAGESEMAFH 246
              E++V   T L+SMY   G   EAE VF+   L  + +   N M+  Y +   S+ AF 
Sbjct: 470  YVESSV--ATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFG 527

Query: 247  VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
              + +L     P+  +FT+V+S CY +   +E + L    ++ G  R   +  A+++M+G
Sbjct: 528  ALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLRMCILESGY-RSACLETALISMHG 583

Query: 307  KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
            +    E+A  +FD +   +++SWTA++S    +    +  + F      G+  D   LAT
Sbjct: 584  RCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLAT 643

Query: 367  VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
             +D C   + L LG  +H    + G  +D+ +  AL+++Y+  GD + A    +    + 
Sbjct: 644  TLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARD 703

Query: 427  TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
               +N + + + +  A   ++ ++LF   +L G++PD +TFS  L++S   A +  G+  
Sbjct: 704  LVSWNIMSAAYAQ--AGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLF 761

Query: 487  HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
            H  + ++G  +DV V   L+ +YAKCG +D A  +F+G     +V  NA++ A A HG  
Sbjct: 762  HGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFS 821

Query: 547  KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
            + A+ +F +M++EG  PD  +++ ++ AC ++G+ E G   F  +++ +G+ P LEH+AC
Sbjct: 822  EEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYAC 881

Query: 607  MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
             VDLLGRAG+L  A  +I   PF ++ L+W +L+   KL  +++     ++R+L+L+P +
Sbjct: 882  FVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHN 941

Query: 667  AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
            + + +++SN+Y   G   +A   R  + D  +    G SW+EI  ++H FVA  + HP++
Sbjct: 942  SAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQT 1001

Query: 727  EEIYSKLDLLNDEMK 741
            +EIY  LD L   M+
Sbjct: 1002 DEIYVVLDKLELLMR 1016



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 164/557 (29%), Positives = 262/557 (47%), Gaps = 27/557 (4%)

Query: 40  VAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNL 99
           +  LCS+S     +R     ++  L++  + S DL  G+  H  +  +G +   F  N L
Sbjct: 7   IRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCL 66

Query: 100 INLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM-YRSEEKFN 158
           IN+Y +   L+ A  +F  M  R+ ++WT+LI      G +     +   M   S    N
Sbjct: 67  INMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPN 126

Query: 159 EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN----VFVGTSLISMYFHSGCFREAE 214
            +T   +L AC+   D   G  IHA   + G E        VG ++I+MY   G   +A 
Sbjct: 127 SYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAI 186

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEM---AFHVFVHLLSSDFEPNDYTFTNVISVCY 271
            VF  +  KDV  V++  +    A E      A  +F  +L     PN  TF   +  C 
Sbjct: 187 AVFLTIPEKDV--VSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT 244

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER---NLIS 328
               + +G  LH L  + G+  +   GNA++ MYGK G  E A  +F A++ R   +L+S
Sbjct: 245 S---LRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVS 301

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL--QLHGF 386
           W A+IS  V +G  G A+  F      G+  +S  L T+++  +  S ++ G   + HG 
Sbjct: 302 WNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAA-SGVDFGAARKFHGR 360

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA-EFNAILSGFMEKIADDE 445
             + GYL DV +G A++ +YAK G   +A  +      K     +N +L    ++ +  +
Sbjct: 361 IWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGK 420

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI--KTGYAADVIVGN 503
             V+  F    LAG++P+ V+F  +L+  ++   L  GR +H+  +  +  Y  +  V  
Sbjct: 421 --VVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY-VESSVAT 477

Query: 504 ALITMYAKCGSIDGAFQIFK--GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            L++MY KCGSI  A  +FK   +  R +V+WN ML AYA +   K A     EM + G 
Sbjct: 478 MLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGV 537

Query: 562 APDDISILGVLQACIYS 578
            PD +S   VL +C  S
Sbjct: 538 LPDALSFTSVLSSCYCS 554



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 195/393 (49%), Gaps = 18/393 (4%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +T ++  C ++  + +GK+ H L    G+ + + +GN ++ MY + G  EEA  +F  + 
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLE-FLDLGICCDSSCLATVIDGCSVCSNLELGL 381
           ERN++SWTALIS   +SG   +A   F    L+     +S  L  +++ C+   +L +G 
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 382 QLHGFAIKHGY----LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
            +H    + G      +   +G A++++YAK G  + A  +      K    + A+   +
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC--LVRGRSLHAYSIKTGY 495
            ++      D + +F +  L  + P+ +TF     ++A  AC  L  G  LH+   + G 
Sbjct: 208 AQE-RRFYPDALRIFREMLLQPLAPNVITF-----ITALGACTSLRDGTWLHSLLHEAGL 261

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDR---DIVSWNAMLSAYALHGLGKGALLL 552
             D + GNALI MY KCG  +GA+ +FK ++ R   D+VSWNAM+SA    G    A+ +
Sbjct: 262 GFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN-EIEQIYGLRPILEHFACMVDLL 611
           F  ++ EG  P+ ++++ +L A   SG+  G    F+  I +   LR ++   A ++ + 
Sbjct: 322 FRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNA-IISMY 380

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
            + G  S A  +     +    + W T++  S+
Sbjct: 381 AKCGFFSAAWTVFRRIRWKCDVISWNTMLGASE 413



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 8/270 (2%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           + S  L LG+ +HA + + G + D    N L+N+Y+       A   F+ M  R  ++W 
Sbjct: 649 LDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWN 708

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE---ACSLLEDRIFGEQIHAFA 185
            +   Y   G  +  + +   M     K ++ T S  L      +L+ D   G+  H  A
Sbjct: 709 IMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSD---GKLFHGLA 765

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
            +SG +++V V T L+ +Y   G   EA ++FRG     V  +N +I    + G SE A 
Sbjct: 766 AESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAV 825

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTM 304
            +F  +      P+  T  ++IS C     VEEG      +   FG+   +      V +
Sbjct: 826 KMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDL 885

Query: 305 YGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            G+ G  E AE++   +  E N + WT+L+
Sbjct: 886 LGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 12/213 (5%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           + +S GS  +  G+  H    +SG  +D   A  L+ LYAK  +LD A  LF G    + 
Sbjct: 746 LNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTV 805

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRI--FGE 179
           +   ++I      G  E  + +   M +   + +  T   I+ AC    ++E+    F  
Sbjct: 806 VLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLT 865

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK-A 238
               F I    E+        + +   +G    AE + R + ++D   V   +L   K  
Sbjct: 866 MKEYFGISPTLEHY----ACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQ 921

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           G++E+       +L  + +P++     V+S  Y
Sbjct: 922 GDAELGERCAQRIL--ELDPHNSAAHVVLSNIY 952


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/641 (29%), Positives = 332/641 (51%), Gaps = 4/641 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +HA  L+SG   D F  N L+  YA       A+++FD M  R  ++W SL+  +L 
Sbjct: 95  GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLA 154

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +  ++        M RS    N  +   ++ AC + ++  FG  +H   +K+G ++ V +
Sbjct: 155 NKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNL 214

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G +L+ MY   G    +  VF G+  ++    N  I  +  AG       +F  +    F
Sbjct: 215 GNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGF 274

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P   T ++++    E    + G+++HG ++K  +  +I V N++V MY K G  E+A  
Sbjct: 275 MPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACA 334

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F+ I  RN++SW A+I+  V++G   +A    ++    G C +S  L  ++  CS  ++
Sbjct: 335 VFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMAS 394

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L+ G Q+H ++I+ G + D+ +  AL+D+YAK G L+ A+ + D  S K    +N ++ G
Sbjct: 395 LKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILG 453

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           + +     E   + LF Q    G+E D ++F   L+   + +   +G+ +H   ++   +
Sbjct: 454 YSQSPWSFES--LNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLS 511

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
               + N L+ +Y K G +D A +IF  I ++D+ SWN M+  Y +HG    A  LF+ M
Sbjct: 512 NHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLM 571

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K  G   D +S + VL  C + GL E G   F+ +     L P   H+ACMVDLLGR+G+
Sbjct: 572 KDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHM-LAQNLEPQQMHYACMVDLLGRSGQ 630

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L+E++ +I   PF  +  +W  L+   ++  N + +  A+  L +L+P+ +G + ++ NM
Sbjct: 631 LTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNM 690

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           YA  G  +EA K+RT M   ++ K    SW++  +KL  F+
Sbjct: 691 YAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKLQAFL 731



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 171/334 (51%), Gaps = 4/334 (1%)

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE--EGKQLHGLAVKFGVVREISVGNAI 301
           A  V+ H+L S   P+D TF   +            +G +LH  A++ G + ++  GN +
Sbjct: 58  ALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTL 117

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V  Y   G + +A R+FD +  R+++SW +L+S ++ +     A    L  +  G+  + 
Sbjct: 118 VAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNV 177

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           + L +V+  C V      GL +HG  +K G  S V LG ALVD+Y K G ++++  + +G
Sbjct: 178 ASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEG 237

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              +    +N+ +  F+   A    DV+ LF      G  P  +T S LL          
Sbjct: 238 MPERNEVSWNSAIGCFLN--AGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFD 295

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            GR +H YSIK     D+ V N+L+ MYAK GS++ A  +F+ I  R++VSWNAM++   
Sbjct: 296 LGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLV 355

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            +G    A  L  +M+++G  P+ I+++ +L AC
Sbjct: 356 QNGAESEAFGLVIKMQKDGECPNSITLVNLLPAC 389



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 182/360 (50%), Gaps = 6/360 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P LV++    G   LG+ VH + +K   + D F AN+L+++YAKF  L+ A  +F+ + V
Sbjct: 286 PALVEL----GYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEV 341

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R+ ++W ++I   + +G      G+   M +  E  N  T   +L ACS +     G+QI
Sbjct: 342 RNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQI 401

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA++I++G   ++F+  +LI MY   G  R A+++F  L+ KD    N +IL Y+++  S
Sbjct: 402 HAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILGYSQSPWS 460

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             + ++F  L S   E +  +F   ++ C      ++GK++HG+ V+  +     + N +
Sbjct: 461 FESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTL 520

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + +Y K GM + A ++F+ I E+++ SW  +I GY   G    A + F    D G+  D 
Sbjct: 521 LGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDH 580

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL-KSARMLLD 420
                V+  CS    +E G +     +             +VD+  + G L +S  ++LD
Sbjct: 581 VSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEIILD 640


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 199/594 (33%), Positives = 311/594 (52%), Gaps = 40/594 (6%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISM--YFHSGCFREAENVF---RGLAYKDVRCVNFMIL 233
           +QIH+  IK+G  N VFV + LI       SG    A ++F   +     +V   N +I 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-- 291
            Y+ +     + H+F  +L    +PN +TF  +   C +     EGKQLH  A+K  +  
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 292 -----------------------------VREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
                                        +R+     A++T Y   G  ++A R+FD I 
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
            ++++SW A+ISGYV+SG   +AI  F E  +  +  + S +  V+  C    + ELG  
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +  +   +G+ S+++L  AL+D+Y K G+   AR L DG   K    +N ++ G+     
Sbjct: 285 IGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGY--SYL 342

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIV 501
              E+ + LF     + ++P+ VTF  +L   A    L  G+ +HAY  K    +++  +
Sbjct: 343 SLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASL 402

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG- 560
             +LI MYAKCG I+ A ++F+ +  R++ SWNAMLS +A+HG  + AL LF EM  +G 
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
           F PDDI+ +GVL AC  +GL + G   F  + Q YG+ P L+H+ CM+DLL RA +  EA
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA 522

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
             L+ +        +W +L+S  K     +F    ++RL  LEP++AG+F+L+SN+YAG 
Sbjct: 523 EILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGA 582

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           G  D+ A++RT +ND  + K  GC+ IEID  +H F+   K HPE   IY  L+
Sbjct: 583 GRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLN 636



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 220/508 (43%), Gaps = 44/508 (8%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYA--KFNRLDVAQKLFD---GMLVRSAITWTSLIK 132
           + +H+ ++K+G  N  F  + LI+  A      L  A  LF+        +   W SLI+
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY       S L +   M     + N HT   + ++C+  +    G+Q+HA A+K     
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 193 NVFVGTSLISM-------------------------------YFHSGCFREAENVFRGLA 221
           N  V TS+I M                               Y   GC  +A  +F  + 
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            KDV   N MI  Y ++G  E A   F  +  ++  PN  T   V+S C      E GK 
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +       G    + + NA++ MY K G ++ A  +FD I E+++ISW  +I GY     
Sbjct: 285 IGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSL 344

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH-GYLSDVRLGT 400
             +A+  F   L   +  +      ++  C+    L+LG  +H +  K+    S+  L T
Sbjct: 345 YEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWT 404

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           +L+D+YAK G +++A  +      +  A +NA+LSGF   +    E  + LFS+    G+
Sbjct: 405 SLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGF--AMHGHAERALALFSEMVNKGL 462

Query: 461 -EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDG 517
             PD +TF  +LS + +QA LV     +  S+   Y     + +   +I + A+    + 
Sbjct: 463 FRPDDITFVGVLS-ACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEE 521

Query: 518 AFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           A  + K +  + D   W ++LSA   HG
Sbjct: 522 AEILMKNMEMEPDGAIWGSLLSACKAHG 549



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 6/266 (2%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           +LG+ + +++  +G  ++    N LI++Y K    D+A++LFDG+  +  I+W ++I GY
Sbjct: 280 ELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGY 339

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN-- 192
                YE  L +   M RS  K N+ T   IL AC+ L     G+ +HA+ I     N  
Sbjct: 340 SYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAY-IDKNLRNSS 398

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N  + TSLI MY   GC   AE VFR +  +++   N M+  +   G +E A  +F  ++
Sbjct: 399 NASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMV 458

Query: 253 SSD-FEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +   F P+D TF  V+S C +   V+ G Q    +   +G+  ++     ++ +  +   
Sbjct: 459 NKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEK 518

Query: 311 SEEAERMFDAIS-ERNLISWTALISG 335
            EEAE +   +  E +   W +L+S 
Sbjct: 519 FEEAEILMKNMEMEPDGAIWGSLLSA 544



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 156/368 (42%), Gaps = 44/368 (11%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA--KGGDLKSARMLLDGFSCKYTAE-- 429
           C N+    Q+H   IK G  + V + + L+   A    GDL  A  L +     +     
Sbjct: 38  CKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVF 97

Query: 430 -FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N+++ G+    +      + LFS+    G++P+  TF  L            G+ LHA
Sbjct: 98  IWNSLIRGYSLSSS--PLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHA 155

Query: 489 YSIKTG--------------YAA-----------------DVIVGNALITMYAKCGSIDG 517
           +++K                YA+                 D +   ALIT Y   G +D 
Sbjct: 156 HALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDD 215

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A ++F  I  +D+VSWNAM+S Y   G  + A++ F EM+     P+  +++ VL AC +
Sbjct: 216 ARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGH 275

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           +   E G  + + +    G    L+    ++D+  + G    A  L +     +  + W 
Sbjct: 276 TRSGELGKWIGSWVRD-NGFGSNLQLTNALIDMYCKCGETDIARELFDGIE-EKDVISWN 333

Query: 638 TLVSVSKLMANSKFSILASKRLL--DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN- 694
           T++     ++  + ++   + +L  +++P D  +F+ + +  A  G LD    V   ++ 
Sbjct: 334 TMIGGYSYLSLYEEALALFEVMLRSNVKPNDV-TFLGILHACACLGALDLGKWVHAYIDK 392

Query: 695 DLRLSKEA 702
           +LR S  A
Sbjct: 393 NLRNSSNA 400


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 176/566 (31%), Positives = 306/566 (54%), Gaps = 39/566 (6%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A +VF  +   ++   N M+  +  + +   A  ++V ++S    PN Y+F  ++  C +
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA------------ 320
           +   EEG+Q+H   +K G   +  V  ++++MY ++G  E+A ++FDA            
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 321 -------------------ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
                              I+ER+++SW A+I+GYV +G   +A+  F E +   +  D 
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIK----HGYLSDVRLGTALVDIYAKGGDLKSARM 417
             L +V+  C+   ++ELG Q+H +       HG+ S +++  AL+D+Y+K GD+++A  
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L +G SCK    +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   A  
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTH--TNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHL 314

Query: 478 ACLVRGRSLHAYSIKT--GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
             +  GR +H Y  K   G   +  +  +LI MYAKCG I+ A Q+F  +  R + SWNA
Sbjct: 315 GAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNA 374

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M+  +A+HG    A  LF  M+     PDDI+ +G+L AC +SGL + G  +F  + Q Y
Sbjct: 375 MIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDY 434

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            L P LEH+ CM+DLLG +G   EA  +I++ P     ++W +L+   K   N + +   
Sbjct: 435 NLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESF 494

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           +++L+ +EP+++GS++L+SN+YA  G  ++ A+VR  +N   + K  GCS IE+DS +H 
Sbjct: 495 AQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHE 554

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMK 741
           F+   K HP   EIY  L+ ++ +++
Sbjct: 555 FIIGDKLHPRRREIYHMLEEMDVQLE 580



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 200/419 (47%), Gaps = 41/419 (9%)

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
           F+ L  A  +F+ +   + + W ++++G+    D  S L +   M       N ++   +
Sbjct: 11  FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG----------------- 208
           L++C+  +    G QIHA  +K G   + +V TSLISMY  +G                 
Sbjct: 71  LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130

Query: 209 --C------------FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
             C            FR A  VF  +  +DV   N MI  Y + G  E A  +F  ++ +
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLA----VKFGVVREISVGNAIVTMYGKHGM 310
           +  P++ T  +V+S C ++  +E G+Q+H          G    + + NA++ +Y K G 
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A  +F+ +S ++++SW  LI GY  +    +A+  F E L  G C +   L +V+  
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310

Query: 371 CSVCSNLELGLQLHGFAIK--HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           C+    +++G  +H +  K   G  ++  L T+L+D+YAK GD+++A  + +    +  +
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370

Query: 429 EFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
            +NA++ GF M   A+   D   LFS+ R   +EPD +TF  LLS  +    L  GR +
Sbjct: 371 SWNAMIFGFAMHGRANAAFD---LFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 164/360 (45%), Gaps = 37/360 (10%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG-- 118
           +P L+K    S   + G+ +HA +LK G   D +   +LI++YA+   L+ A+K+FD   
Sbjct: 67  FPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASS 126

Query: 119 -----------------------------MLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
                                        +  R  ++W ++I GY+++G YE  L +  +
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS----GFENNVFVGTSLISMYF 205
           M R+  + +E T   ++ AC+       G Q+H++        GF +++ +  +LI +Y 
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246

Query: 206 HSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
             G    A  +F GL+ KDV   N +I  Y      + A  +F  +L S   PND T  +
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306

Query: 266 VISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
           V+  C     ++ G+ +H    K   GV  E S+  +++ MY K G  E A ++F+++  
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLY 366

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           R+L SW A+I G+   G    A + F       +  D      ++  CS    L+LG Q+
Sbjct: 367 RSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 11/156 (7%)

Query: 72  GDLKLGQAVHAFLLKS--GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G + +G+ +H ++ K   G  N+T    +LI++YAK   ++ A ++F+ ML RS  +W +
Sbjct: 315 GAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNA 374

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL-----LEDRIFGEQIHAF 184
           +I G+   G   +   +   M  +  + ++ T   +L ACS      L  +IF      +
Sbjct: 375 MIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDY 434

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
            +    E+       +I +  HSG F+EAE +   +
Sbjct: 435 NLTPKLEHY----GCMIDLLGHSGLFKEAEEMIHTM 466


>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 208/682 (30%), Positives = 356/682 (52%), Gaps = 40/682 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GD KLG  +HAF + SG  +     N+L+N+Y K    D A  +F+ +     ++W +++
Sbjct: 92  GDSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVL 151

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+    D    L  A  M  +   F+  TC+ +L  CS  E  IFG Q+H+  +K G +
Sbjct: 152 SGFQRSDD---ALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLD 208

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             VFVG +LI+MY  S C R                    ++E  +      A  VF+ +
Sbjct: 209 CEVFVGNALITMY--SRCCR--------------------LVEARRGNSGLEAILVFLEM 246

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           L    + +  +FT  IS C      E G+Q+H LAVK G    + V N +++ Y K    
Sbjct: 247 LKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDI 306

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+A+ +F++I +RN++SWT +IS          A + F E    G+  +      +I   
Sbjct: 307 EDAKLVFESIIDRNVVSWTTMISISEED-----ATSLFNEMRRDGVYPNDVTFVGLIHAI 361

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           ++ + +E G  +HG  +K  +LS++ +  +L+ +YAK   +  +  + +  + +    +N
Sbjct: 362 TMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWN 421

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS-LSASQACLVR-GRSLHAY 489
           +++SG+ +     +E +    S   L    P+  TF  +LS +++++A  +R G+  H++
Sbjct: 422 SLISGYAQN-GLWQEALQTFLSA--LMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSH 478

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            +K G   + IV +AL+ MYAK GSI  +  +F     ++ V+W A++SA+A HG  +  
Sbjct: 479 ILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAV 538

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           + LF++M+REG  PD I+ L V+ AC   G+ + G  LFN + + + + P  EH++ MVD
Sbjct: 539 MNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVD 598

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           +LGRAGRL EA   +   P      + ++L+   ++  N   +   +  L+++EP  +GS
Sbjct: 599 MLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGS 658

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK-----LHHFVASGKDHP 724
           ++L+SN+YA +G  ++ AK+R  M +  + KE G SW+++        LH F +  K HP
Sbjct: 659 YVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHP 718

Query: 725 ESEEIYSKLDLLNDEMKLKVKD 746
           +SEEIY   + L  EMK   K+
Sbjct: 719 QSEEIYRMAETLGLEMKFLEKE 740



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 31/293 (10%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   +A V+  C  C + +LG Q+H FAI  G++S V +  +L+++Y K G    A ++ 
Sbjct: 79  DQVTVAIVLKAC--CGDSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVF 136

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +  +      +N +LSGF        +D +    +    G+  D VT + +L+  +    
Sbjct: 137 ENLNNPDIVSWNTVLSGFQRS-----DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEG 191

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
            + G  LH+  +K G   +V VGNALITMY++C  +  A +   G+              
Sbjct: 192 FIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRGNSGLE------------- 238

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
                    A+L+F EM +EG   D +S  G + AC +    E G  + +   +I G   
Sbjct: 239 ---------AILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKI-GYDT 288

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
            ++    ++    +   + +A  L+  S    + + W T++S+S+  A S F+
Sbjct: 289 HVKVCNVLISTYSKCEDIEDA-KLVFESIIDRNVVSWTTMISISEEDATSLFN 340


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 197/649 (30%), Positives = 337/649 (51%), Gaps = 17/649 (2%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y K   +  A  +F  +   ++++WT ++  +  +G Y   LG    M     + +   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRGL 220
             V +  CS  +D   G+ +HA  +++   E ++ +GT+LI+MY        A   F  +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE---PNDYTFTNVISVCYENLGVE 277
             K +   N +I  Y++ G+   A  ++  ++S   E   P+  TF++ +  C     + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           +G+++    V  G   +  V NA++ MY K G  E A ++FD +  R++I+W  +ISGY 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE---LGLQLHGFAIKHGYLS 394
           + G   +A+  F     +G       + T I   + C+NLE    G  +H    + GY S
Sbjct: 241 KQGAATQALELFQR---MGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYES 297

Query: 395 DVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           D+ +G  L+++Y K    L+ AR + +    +    +N ++  +++      +D + +F 
Sbjct: 298 DLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQY--GQAKDALDIFK 355

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           Q +L  + P+ +T S +LS  A      +G+++HA        ADV++ N+L+ MY +CG
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCG 415

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           S+D    +F  I D+ +VSW+ +++AYA HG  +  L  F E+ +EG A DD++++  L 
Sbjct: 416 SLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLS 475

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC + G+ + G+  F  +   +GL P   HF CMVDLL RAGRL  A NLI+  PF    
Sbjct: 476 ACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDA 535

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI-LVSNMYAGQGMLDEAAKVRTT 692
           + W +L+S  KL  ++K +   + +L +LE +D  S + L+SN+YA  G  D+   VR T
Sbjct: 536 VAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKT 592

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            N     K  GCS+IEI+  +H FVA  K HPE E I +++  L+ +MK
Sbjct: 593 RNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMK 641



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 178/350 (50%), Gaps = 2/350 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GD+  G+ + A  + SG  +D+   N LIN+Y+K   L+ A+K+FD +  R  I W ++I
Sbjct: 177 GDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY   G     L +   M  ++ K N  T   +L AC+ LED   G  IH    + G+E
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYE 296

Query: 192 NNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           +++ +G  L++MY   S    EA  VF  +  +DV   N +I+ Y + G+++ A  +F  
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +   +  PN+ T +NV+S C       +GK +H L        ++ + N+++ MY + G 
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            ++   +F AI +++L+SW+ LI+ Y + GH    +  F E L  G+  D   + + +  
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476

Query: 371 CSVCSNLELGLQLH-GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           CS    L+ G+Q        HG   D R    +VD+ ++ G L++A  L+
Sbjct: 477 CSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLI 526



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 234/493 (47%), Gaps = 9/493 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           S DLK GQ +HA +L++   + D      LI +YA+   L++A+K FD M  ++ +TW +
Sbjct: 71  SKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNA 130

Query: 130 LIKGYLDDGDYESVLGIACDMY-RSEE--KFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           LI GY  +GD+   L I  DM  +S E  K +  T S  L AC+++ D   G +I A  +
Sbjct: 131 LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTV 190

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
            SG+ ++  V  +LI+MY   G    A  VF  L  +DV   N MI  Y K G +  A  
Sbjct: 191 ASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALE 250

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F  +  +D +PN  TF  +++ C     +E+G+ +H    + G   ++ +GN ++ MY 
Sbjct: 251 LFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYT 310

Query: 307 KHGMS-EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
           K   S EEA ++F+ +  R++I+W  LI  YV+ G    A++ F +     +  +   L+
Sbjct: 311 KCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLS 370

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            V+  C+V      G  +H         +DV L  +L+++Y + G L     +      K
Sbjct: 371 NVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDK 430

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-R 484
               ++ +++ + +         +  F +    G+  D VT    LS  +    L  G +
Sbjct: 431 SLVSWSTLIAAYAQH--GHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQ 488

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           +  +     G A D      ++ + ++ G ++ A  +   +    D V+W ++LS   LH
Sbjct: 489 TFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLH 548

Query: 544 GLGKGALLLFEEM 556
              K A  + +++
Sbjct: 549 NDTKRAARVADKL 561


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 220/729 (30%), Positives = 359/729 (49%), Gaps = 81/729 (11%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           ++ +A+  F  +  +  +T   N++I+ +AK  R+  A++LFDGM  R+ ++W S+I  Y
Sbjct: 30  QIDEAIKVF--QHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAY 87

Query: 135 LDDGD----------------YESVLGIACDMYRSE------------EKFNEHTCSVIL 166
           L +                  Y   L I C     E             K+N   C+ ++
Sbjct: 88  LHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMV 147

Query: 167 EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR 226
              +  ++R F E    F        ++    S+++ Y  +G  R     F  +A +DV 
Sbjct: 148 AGYA--KNRQFDEARRLFDAMPA--KDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV 203

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC-YENLG-VEEGKQLHG 284
             N M+  + + G+   ++  F  +      PN  T + V  +C +   G + E ++L  
Sbjct: 204 SWNLMVDGFVEVGDLNSSWEFFEKI------PNPNTVSWVTMLCGFARFGKIAEARRLFD 257

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
                  +R +   NA++  Y ++   +EA  +F  + E+N ISWT +I+GYVR G   +
Sbjct: 258 QMP----IRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDE 313

Query: 345 A------------------INGFLE----------FLDLGICCDSSCLATVIDGCSVCSN 376
           A                  I+G+++          F  + I  D  C  T+I G S C  
Sbjct: 314 ARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIR-DVVCWNTMIAGYSQCGR 372

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           ++  L L    +K     D+     +V  YA+ G + +A  + +    K    +N+++SG
Sbjct: 373 MDEALHLFKQMVK----KDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISG 428

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
             +       D +  F      G +PD  TF+  LS  A  A L  G+ LH   +K+GYA
Sbjct: 429 LTQN--GSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYA 486

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            D+ V NALITMYAKCGSI  A  +FK I   D+VSWN++++AYAL+G G+ AL LF +M
Sbjct: 487 TDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKM 546

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           + EG APD+++ +G+L AC + GL + G+ LF  + Q Y + P+ EH+ACMVDLLGRAGR
Sbjct: 547 EVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGR 606

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L EA  L+     + +  +W  L+   ++  N + +  A+++LL+ EP    +++L+SNM
Sbjct: 607 LEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNM 666

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
            A  G  DE A+VR  M +    K+ G SWIE+ +++H F++    HP + E+   L  L
Sbjct: 667 QAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSL 726

Query: 737 NDEMKLKVK 745
              M+   K
Sbjct: 727 TAHMRNTAK 735



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 184/460 (40%), Gaps = 101/460 (21%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N  I +  K+G+ + A  VF H+       N  T  ++IS   +N  + + +QL     +
Sbjct: 19  NLKITQLGKSGQIDEAIKVFQHMT----HKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
               R I   N+++  Y  +   EEA ++FD +  R+L SWT +I+ Y R+G   KA N 
Sbjct: 75  ----RNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNL 130

Query: 349 F--LEFLDLGICCDSSCLA--------------------------TVIDGCSVCSNLELG 380
           F  L +    +CC++                              +++ G +    + LG
Sbjct: 131 FNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLG 190

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDI---------------------------YAKGGDLK 413
           LQ      +   +S   +    V++                           +A+ G + 
Sbjct: 191 LQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIA 250

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            AR L D    +    +NA+++ +++    DE   + LF +      E + ++++ +++ 
Sbjct: 251 EARRLFDQMPIRNVVAWNAMIAAYVQNCHVDE--AISLFMEMP----EKNSISWTTVING 304

Query: 474 SASQACLVRGRSL----------HAYSIKTGYAA-----------------DVIVGNALI 506
                 L   R L             ++ +GY                   DV+  N +I
Sbjct: 305 YVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMI 364

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
             Y++CG +D A  +FK +  +DIVSWN M+++YA  G    A+ +FEEMK +     + 
Sbjct: 365 AGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNS 424

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
            I G+ Q   Y    +  + + +E     G +P    FAC
Sbjct: 425 LISGLTQNGSYLDALKSFMLMGHE-----GQKPDQSTFAC 459



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 18/175 (10%)

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           V   N  IT   K G ID A ++F+ ++ ++ V+ N+M+SA+A +G    A  LF+ M +
Sbjct: 15  VFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI--LEHFACMVDLLGRAGR 616
                  +S   ++ A +++   E       E  Q++   P   L  +  M+    R G 
Sbjct: 75  RNI----VSWNSMIAAYLHNDRVE-------EARQLFDKMPTRDLYSWTLMITCYTRNGE 123

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGSF 670
           L++A NL N  P+  +P+    +  V+    N +F    ++RL D  P KD  S+
Sbjct: 124 LAKARNLFNLLPYKWNPVCCNAM--VAGYAKNRQFD--EARRLFDAMPAKDLVSW 174


>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 216/738 (29%), Positives = 384/738 (52%), Gaps = 21/738 (2%)

Query: 14  FKSQQSLPPLKKKVPINTFSPNPKS--QVAYLCSISSVSCSERTLLFNDWPQLVKISIGS 71
           F++   L  L  K+   ++S N +   Q+ +   IS    S+  +L    P ++K +  +
Sbjct: 6   FQAGLRLSDLISKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVL----PSILK-ACSN 60

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
               LG A+H  L+K G Q+ T  AN+ I+ Y K+  LD AQ+ FD    + +++W  ++
Sbjct: 61  TSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMV 120

Query: 132 KGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIF--GEQIHAFAIKS 188
            G   +G   S++   C   +     F  +  S++L   +  E +I+  G   H +  +S
Sbjct: 121 HGNFSNG---SIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRS 177

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHV 247
           GF   + V  SL+S+Y     +  A  +F  ++ + DV   + MI  + + GE E  F +
Sbjct: 178 GFSAILSVQNSLLSLYAEVHMYF-AHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLM 236

Query: 248 FVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           F ++++ +   P+  T  +V+  C     +  G  +HGL +  G+  ++ VGN+++ MY 
Sbjct: 237 FRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYS 296

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K      A + F  I E+N+ISW  ++S Y+ +    +A+      +  G   D   LA 
Sbjct: 297 KCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLAN 356

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+       +      +HG  I+ GY S+  L  +++D YAK   ++ ARM+ DG + K 
Sbjct: 357 VLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKD 416

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              ++ +++GF      DE   + +F Q     + P+ V+   L+   A  A L + +  
Sbjct: 417 VVAWSTMIAGFARNGKPDE--AISVFKQMN-EEVIPNNVSIMNLMEACAVSAELRQSKWA 473

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H  +++ G A++V +G ++I MY+KCG I+ + + F  I  +++V W+AM+SA+ ++GL 
Sbjct: 474 HGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLA 533

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             AL+LFE++K+ G  P+ ++ L +L AC + GL E G+  F  + Q +G+ P LEH++C
Sbjct: 534 HEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSC 593

Query: 607 MVDLLGRAGRLSEAMNLINSSP--FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
           +VD+L RAG+ +EA+ LI   P        +W TL+S  +   N      A+ R+L LEP
Sbjct: 594 IVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEP 653

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
             +  ++L SN+YA  G++ ++AK+R    +  +   AG S + I+S+   FVA    +P
Sbjct: 654 LSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAGDVLNP 713

Query: 725 ESEEIYSKLDLLNDEMKL 742
            ++EIY  +  L+  MK+
Sbjct: 714 RADEIYLMVKKLHGVMKI 731


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 187/617 (30%), Positives = 317/617 (51%), Gaps = 43/617 (6%)

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF---R 211
           +    H    +L  C  L+       IHA  IK+G  N  +  + L+ +   S  F    
Sbjct: 29  DSLRNHPSLSLLHNCKTLQSL---RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLP 85

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
            A +VF  +   ++   N M   +  + +   A  ++V ++S    PN YTF  ++  C 
Sbjct: 86  YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 145

Query: 272 ENLGVEEGKQLHGLAVKFGV-------------------------------VREISVGNA 300
           ++   +EG+Q+HG  +K G                                 R++    A
Sbjct: 146 KSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTA 205

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++  Y   G  E A+++FD I  ++++SW A+ISGY  +G+  +A+  F E +   I  D
Sbjct: 206 LIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPD 265

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            S + TV+  C+   ++ELG Q+H +   HG+ S++++  +L+D+Y+K G+L++A  L +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFE 325

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
           G   K    +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   A    +
Sbjct: 326 GLLYKDVISWNTLIGGYTH--MNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAI 383

Query: 481 VRGRSLHAY---SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             GR +H Y    +K+   A  +   +LI MYAKCG I+ A Q+F  I  + + SWNAM+
Sbjct: 384 DIGRWIHVYIDKRLKSATNASSL-RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             +A+HG    A  +F  M++ G  PDDI+ +G+L AC  SG+ + G  +F  + Q Y +
Sbjct: 443 FGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKI 502

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P LEH+ CM+DLLG +G   EA  +IN+       ++W +L+   K+  N +     ++
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQ 562

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            L+ +EP++ G ++L+SN+YA  G  +E AK+R  +ND  + K  GCS IEIDS +H F+
Sbjct: 563 NLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFI 622

Query: 718 ASGKDHPESEEIYSKLD 734
              K HP + EIY  L+
Sbjct: 623 IGDKFHPRNREIYGMLE 639



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 211/444 (47%), Gaps = 40/444 (9%)

Query: 80  VHAFLLKSGSQNDTFEANNLINL---YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           +HA ++K+G  N  +  + L+ L      F+ L  A  +F+ +   + + W ++ +G+  
Sbjct: 52  IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 111

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
             D  S L +   M       N +T   +L++C+  +    G+QIH   +K G++ ++FV
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFV 171

Query: 197 GTSLISMYFHSGCFREAENVF--------------------RG-----------LAYKDV 225
            TSLIS+Y  +G   +A  VF                    RG           +  KDV
Sbjct: 172 HTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDV 231

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
              N MI  Y + G  + A  +F  ++ ++  P++ T   V+S C ++  +E G+Q+H  
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSW 291

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
               G    + + N+++ +Y K G  E A  +F+ +  +++ISW  LI GY       +A
Sbjct: 292 IDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEA 351

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALV 403
           +  F E L  G   +   + +++  C+    +++G  +H +  K      +   L T+L+
Sbjct: 352 LLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLI 411

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEP 462
           D+YAK GD+++A  + +    K  + +NA++ GF M   AD   D+   FS+ R  G+EP
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDI---FSRMRKIGIEP 468

Query: 463 DPVTFSRLLSLSASQACLVRGRSL 486
           D +TF  LLS  +    L  GR +
Sbjct: 469 DDITFVGLLSACSRSGMLDLGRHI 492



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 175/390 (44%), Gaps = 42/390 (10%)

Query: 30  NTFSPNPKSQVA-YLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLK 86
           +  S +P S +  Y+C IS        LL N +  P L+K    S   K GQ +H  +LK
Sbjct: 109 HALSSDPVSALKLYVCMIS------LGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLK 162

Query: 87  SGSQNDTFEANNLINLYAKFNRLD-------------------------------VAQKL 115
            G   D F   +LI++Y +  RL+                                AQKL
Sbjct: 163 LGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKL 222

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FD + V+  ++W ++I GY + G+Y+  L +  +M ++  + +E T   ++ AC+     
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSI 282

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G Q+H++    GF +N+ +  SL+ +Y   G    A  +F GL YKDV   N +I  Y
Sbjct: 283 ELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGY 342

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
                 + A  +F  +L S   PND T  +++  C     ++ G+ +H    K       
Sbjct: 343 THMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATN 402

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             S+  +++ MY K G  E A ++F++I  ++L SW A+I G+   G    A + F    
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMR 462

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQL 383
            +GI  D      ++  CS    L+LG  +
Sbjct: 463 KIGIEPDDITFVGLLSACSRSGMLDLGRHI 492


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 203/703 (28%), Positives = 340/703 (48%), Gaps = 62/703 (8%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA L+ +   +D    + ++      N LD A ++        +I W +L++  L +G 
Sbjct: 54  IHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGC 113

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            + VL     M       +  T   ++ AC    D   G ++H   +K GF  N  +  +
Sbjct: 114 PQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNN 173

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ +Y   G  +E   +F  + ++DV   N MI  Y   G    A  +F  +L S   P+
Sbjct: 174 LMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPD 233

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA----- 314
           + T  +++S C +   +E GK+LH   V   +    S+ N +V MY K G  +EA     
Sbjct: 234 EITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLS 293

Query: 315 ----------------------------ERMFDAISERNLISWTALISGYVRSGHGGKAI 346
                                        ++FD ++ER+L+SWT ++SGYV+ G+  +++
Sbjct: 294 RCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESL 353

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
             F +     +  D   L TV+  C    + +LG  +H F + +G L D  LG AL+D+Y
Sbjct: 354 ELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLY 413

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGF-----MEKIAD-----DEEDV-----MV- 450
           AK G L  A    +   CK  A +N++L GF     ++K  D      E+D+     MV 
Sbjct: 414 AKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVN 473

Query: 451 -------------LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
                        +F + + + ++PD  T   LLS  A    L  G  ++ Y  K     
Sbjct: 474 AYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGI 533

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D ++G ALI MY KCG ++ A++IF  I ++++  W AM++AYA+ G    A+ L+ EM+
Sbjct: 534 DAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEME 593

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
             G  PD ++ + +L AC + GL + G   FN++   Y + P + H+ CMVDLLGR G L
Sbjct: 594 ERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHL 653

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
            E +  I   P      +W +L+   +   N + +  A K+L++++P + G+ +L+SN+Y
Sbjct: 654 EETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIY 713

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           A  G  D+ +KVRT +++  + K+ G + IE +  +H FVAS 
Sbjct: 714 ADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASN 756



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/540 (22%), Positives = 236/540 (43%), Gaps = 74/540 (13%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D+KLG  VH  +LK G   +    NNL+ LY+K  +L    +LF+ M  R  I+W ++I 
Sbjct: 148 DVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMIS 207

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF-- 190
            Y+  G Y   L +  +M  S    +E T   ++  C+ L+D   G+++H + + +    
Sbjct: 208 CYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWI 267

Query: 191 -------------------------------ENNVFVGTSLISMYFHSGCFREAENVFRG 219
                                          E +V + T+L+S Y  S    +A  +F  
Sbjct: 268 RGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDK 327

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +  + +     M+  Y + G    +  +F  +   +  P++     V+S C      + G
Sbjct: 328 MNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLG 387

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           + +H   V +G++ +  +GNA++ +Y K G  +EA R F+ +  ++  SW +++ G+ RS
Sbjct: 388 RSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRS 447

Query: 340 GHGGKA------------------INGFLEFLDL-----GICC---------DSSCLATV 367
           G   KA                  +N +++  DL      I C         D + L ++
Sbjct: 448 GGVDKARDFFNKIPEKDIVSWNTMVNAYVKH-DLFNESFEIFCKMQSSNVKPDKTTLISL 506

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C+    L  G+ ++ +  K+    D  LGTAL+D+Y K G ++ A  +      K  
Sbjct: 507 LSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNV 566

Query: 428 AEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
             + A+++ + ME  A +  D   L+ +    G++PD VTF  LL+ + S   LV     
Sbjct: 567 FVWTAMMAAYAMEGQALEAID---LYLEMEERGVKPDHVTFIALLA-ACSHGGLVDEGYK 622

Query: 487 HAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           +   +++ Y     + +   ++ +  + G ++   +  + +  + D+  W++++ A   H
Sbjct: 623 YFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSH 682



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 175/401 (43%), Gaps = 41/401 (10%)

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
            + E   +H   +   ++ +  + + ++         + A ++     E   I W  L+ 
Sbjct: 47  NIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLE 106

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
             ++ G   + +  +   +  G+  D S    +I  C    +++LG ++HG  +K G+  
Sbjct: 107 NKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGR 166

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +  L   L+ +Y+K G LK    L +  + +    +N ++S ++ K    E   + LF +
Sbjct: 167 NKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE--ALDLFDE 224

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG- 513
             ++G+ PD +T   L+S  A    L  G+ LH Y +         + N L+ MY+KCG 
Sbjct: 225 MLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGK 284

Query: 514 --------------------------------SIDGAFQIFKGISDRDIVSWNAMLSAYA 541
                                            ID A Q+F  +++R +VSW  M+S Y 
Sbjct: 285 MDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYV 344

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
             G    +L LF++M+ E   PD+++++ VL AC++    + G  +   I   YG+  ++
Sbjct: 345 QGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFI-VTYGM--LV 401

Query: 602 EHF--ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           + F    ++DL  + G+L EA+      P  +S   W +++
Sbjct: 402 DGFLGNALLDLYAKCGKLDEALRTFEQLP-CKSAASWNSML 441



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 6/277 (2%)

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           +ID    CSN+     +H   I    + D  + + ++       +L  A  +L       
Sbjct: 38  IIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
           +  +N +L   +++    E  V+  +      G+  D  TF  L+        +  G  +
Sbjct: 98  SIIWNTLLENKLKEGCPQE--VLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEV 155

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H   +K G+  +  + N L+ +Y+KCG +    Q+F+ ++ RD++SWN M+S Y L G+ 
Sbjct: 156 HGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMY 215

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           + AL LF+EM   G  PD+I+++ ++  C     L  G       ++    +R  L    
Sbjct: 216 REALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSL--LN 273

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSE-SPLLWRTLVS 641
           C+VD+  + G++ EA  L++    SE   +LW TLVS
Sbjct: 274 CLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVS 310



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 34/303 (11%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D  LG++VHAF++  G   D F  N L++LYAK  +LD A + F+ +  +SA +W S++ 
Sbjct: 383 DFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLD 442

Query: 133 GYLDDGD-------------------------------YESVLGIACDMYRSEEKFNEHT 161
           G+   G                                +     I C M  S  K ++ T
Sbjct: 443 GFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTT 502

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
              +L +C+ +     G  ++ +  K+    +  +GT+LI MY   GC   A  +F  + 
Sbjct: 503 LISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQII 562

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-K 280
            K+V     M+  Y   G++  A  +++ +     +P+  TF  +++ C     V+EG K
Sbjct: 563 EKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYK 622

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRS 339
             + L   + ++  I     +V + G+ G  EE  +  + +  E ++  W++L+    RS
Sbjct: 623 YFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRA-CRS 681

Query: 340 GHG 342
            H 
Sbjct: 682 HHN 684


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 178/520 (34%), Positives = 285/520 (54%), Gaps = 24/520 (4%)

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A + + ++   D E + +   +V+  C +      GK++HG +VK G+V ++ V NA++ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 304 MYGKHGMSEEAERMFDAISERN----------------------LISWTALISGYVRSGH 341
           MY + G    A  +FD +SER+                      ++SWTA+I+GY+R   
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             +    F+  ++  +  +   + ++I  C     ++LG +LH + +++G+   + L TA
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           LVD+Y K G+++SAR + D    K    + A++S + +  A+  +    LF Q R  G+ 
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQ--ANCIDYAFQLFVQMRDNGVR 330

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           P+ +T   LLSL A    L  G+  HAY  K G   DVI+  ALI MYAKCG I GA ++
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRL 390

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           F    DRDI +WN M++ Y +HG G+ AL LF EM+  G  P+DI+ +G L AC ++GL 
Sbjct: 391 FSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLV 450

Query: 582 EGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             G  LF ++   +GL P +EH+ CMVDLLGRAG L EA  +I S P + +  +W  +++
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
             K+  NS    LA++ LL LEP++ G  +L+SN+YA     ++ A +R  + D  + KE
Sbjct: 511 ACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKE 570

Query: 702 AGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            G S IE++  +H F      HP  E+I   L  ++ ++K
Sbjct: 571 PGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLK 610



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 197/403 (48%), Gaps = 26/403 (6%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ACS +     G++IH F++K+G  ++VFV  +L+ MY   G    A  +F  ++ +D
Sbjct: 115 VLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERD 174

Query: 225 V-------------------RCV---NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYT 262
           V                   R +     MI  Y +  + E    +FV ++  +  PND T
Sbjct: 175 VVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDIT 234

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
             ++I  C     V+ GK+LH   ++ G    +++  A+V MYGK G    A  +FD++ 
Sbjct: 235 MLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMK 294

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
            +++++WTA+IS Y ++     A   F++  D G+  +   + +++  C+V   L++G  
Sbjct: 295 NKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKW 354

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
            H +  K G   DV L TAL+D+YAK GD+  A+ L      +    +N +++G+   + 
Sbjct: 355 FHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGY--GMH 412

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIV 501
              E  + LF++    G++P+ +TF   L   +    +V G+ L    I   G    V  
Sbjct: 413 GYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEH 472

Query: 502 GNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
              ++ +  + G +D A+++ + +    +I  W AML+A  +H
Sbjct: 473 YGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 195/437 (44%), Gaps = 32/437 (7%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD---- 117
           P ++K        ++G+ +H F +K+G  +D F  N L+ +Y++   L  A+ LFD    
Sbjct: 113 PSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSE 172

Query: 118 ------------------GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
                             G   RS ++WT++I GY+   D E    +   M       N+
Sbjct: 173 RDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPND 232

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
            T   ++ +C  +     G+++HA+ +++GF  ++ + T+L+ MY   G  R A  +F  
Sbjct: 233 ITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDS 292

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +  KDV     MI  Y +A   + AF +FV +  +   PN+ T  +++S+C  N  ++ G
Sbjct: 293 MKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG 352

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           K  H    K GV  ++ +  A++ MY K G    A+R+F    +R++ +W  +++GY   
Sbjct: 353 KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMH 412

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK----HGYLSD 395
           G+G KA+  F E   LG+  +     T I     CS+  L ++  G   K     G +  
Sbjct: 413 GYGEKALKLFTEMETLGVKPND---ITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPK 469

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           V     +VD+  + G L  A  +++           AI    +      +   M   + +
Sbjct: 470 VEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNI---AIWGAMLAACKIHKNSNMGELAAR 526

Query: 456 RLAGMEPDPVTFSRLLS 472
            L  +EP    +  L+S
Sbjct: 527 ELLALEPQNCGYKVLMS 543



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 153/309 (49%), Gaps = 25/309 (8%)

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
           H   A+N +     L I  DS  + +V+  CS  S   +G ++HGF++K+G +SDV +  
Sbjct: 89  HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148

Query: 401 ALVDIYAKGGDLKSARMLLD----------------------GFSCKYTAEFNAILSGFM 438
           AL+ +Y++ G L SAR+L D                      GFS +    + A+++G++
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
               +D E+   LF +     + P+ +T   L+        +  G+ LHAY ++ G+   
Sbjct: 209 R--CNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMS 266

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           + +  AL+ MY KCG I  A  IF  + ++D+++W AM+SAYA       A  LF +M+ 
Sbjct: 267 LALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD 326

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS 618
            G  P++++++ +L  C  +G  + G      I++  G+   +     ++D+  + G +S
Sbjct: 327 NGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDK-QGVEVDVILKTALIDMYAKCGDIS 385

Query: 619 EAMNLINSS 627
            A  L + +
Sbjct: 386 GAQRLFSEA 394


>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 216/738 (29%), Positives = 384/738 (52%), Gaps = 21/738 (2%)

Query: 14  FKSQQSLPPLKKKVPINTFSPNPKS--QVAYLCSISSVSCSERTLLFNDWPQLVKISIGS 71
           F++   L  L  K+   ++S N +   Q+ +   IS    S+  +L    P ++K +  +
Sbjct: 6   FQAGLRLSDLISKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVL----PSILK-ACSN 60

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
               LG A+H  L+K G Q+ T  AN+ I+ Y K+  LD AQ+ FD    + +++W  ++
Sbjct: 61  TSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMV 120

Query: 132 KGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIF--GEQIHAFAIKS 188
            G   +G   S++   C   +     F  +  S++L   +  E +I+  G   H +  +S
Sbjct: 121 HGNFSNG---SIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRS 177

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHV 247
           GF   + V  SL+S+Y     +  A  +F  ++ + DV   + MI  + + GE E  F +
Sbjct: 178 GFSAILSVQNSLLSLYAEVHMYF-AYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLM 236

Query: 248 FVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           F ++++ +   P+  T  +V+  C     +  G  +HGL +  G+  ++ VGN+++ MY 
Sbjct: 237 FRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYS 296

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K      A + F  I E+N+ISW  ++S Y+ +    +A+      +  G   D   LA 
Sbjct: 297 KCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLAN 356

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+       +      +HG  I+ GY S+  L  +++D YAK   ++ ARM+ DG + K 
Sbjct: 357 VLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKD 416

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              ++ +++GF      DE   + +F Q     + P+ V+   L+   A  A L + +  
Sbjct: 417 VVAWSTMIAGFARNGKPDE--AISVFKQMN-EEVIPNNVSIMNLMEACAVSAELRQSKWA 473

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H  +++ G A++V +G ++I MY+KCG I+ + + F  I  +++V W+AM+SA+ ++GL 
Sbjct: 474 HGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLA 533

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             AL+LFE++K+ G  P+ ++ L +L AC + GL E G+  F  + Q +G+ P LEH++C
Sbjct: 534 HEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSC 593

Query: 607 MVDLLGRAGRLSEAMNLINSSP--FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
           +VD+L RAG+ +EA+ LI   P        +W TL+S  +   N      A+ R+L LEP
Sbjct: 594 IVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEP 653

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
             +  ++L SN+YA  G++ ++AK+R    +  +   AG S + I+S+   FVA    +P
Sbjct: 654 LSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAGDVLNP 713

Query: 725 ESEEIYSKLDLLNDEMKL 742
            ++EIY  +  L+  MK+
Sbjct: 714 RADEIYLMVKKLHGVMKI 731


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 182/552 (32%), Positives = 313/552 (56%), Gaps = 6/552 (1%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVF   ++I+ Y        A  +F  +   D+   N +I  Y   GE+  A  +F  + 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               + + +T + VI+ C +++G+    QLH +AV  G    +SV NA++T YGK+G  +
Sbjct: 133 EMGLDMDXFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 313 EAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           +A+R+F  +   R+ +SW ++I  Y +   G KA+  F E +  G+  D   LA+V+   
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTAEF 430
           +   +L  GLQ HG  IK G+  +  +G+ L+D+Y+K GG +   R + +  +      +
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N ++SG+ +   +  ED +  F Q +  G  P+  +F  ++S  ++ +   +G+ +H+ +
Sbjct: 311 NTMVSGYSQN-EEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369

Query: 491 IKTGYAADVI-VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           +K+   ++ I V NALI MY+KCG++  A ++F  +++ + VS N+M++ YA HG+   +
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LF+ M     AP  I+ + VL AC ++G  E G   FN +++ + + P  EH++CM+D
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGRAG+LSEA NLI   PF+   + W +L+   +   N + ++ A+ ++L LEP +A  
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++++SNMYA  G  +E A VR  M D  + K+ GCSWIE+  ++H FVA    HP  +EI
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEI 609

Query: 730 YSKLDLLNDEMK 741
           Y  L+ ++ +MK
Sbjct: 610 YEFLEEMSGKMK 621



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 213/460 (46%), Gaps = 50/460 (10%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD------------ 110
            L+K  I   DL  G+++H+  +KS     T+ +N+ I LY+K  RL             
Sbjct: 13  HLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP 72

Query: 111 -------------------VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
                              +A +LFD +     +++ +LI  Y D G+    LG+   M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
                 +  T S ++ AC   +D     Q+H+ A+ SGF++ V V  +L++ Y  +G   
Sbjct: 133 EMGLDMDXFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 212 EAENVFRGL-AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS-- 268
           +A+ VF G+   +D    N MI+ Y +  E   A  +F  ++      + +T  +V++  
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK--HGMSEEAERMFDAISERNL 326
            C E+L    G Q HG  +K G  +   VG+ ++ +Y K   GMS +  ++F+ I+E +L
Sbjct: 251 TCLEDL--SGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMS-DCRKVFEEITEPDL 307

Query: 327 ISWTALISGYVRSGHG-GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
           + W  ++SGY ++      A+  F +   +G   +      VI  CS  S+   G Q+H 
Sbjct: 308 VLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHS 367

Query: 386 FAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
            A+K    S+ + +  AL+ +Y+K G+L+ AR L D  +   T   N++++G+ +     
Sbjct: 368 LALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQH--GI 425

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           E + + LF       + P  +TF  +LS     AC   GR
Sbjct: 426 EMESLHLFQWMLERQIAPTSITFISVLS-----ACAHTGR 460



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 168/352 (47%), Gaps = 5/352 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VRSAITWTSLI 131
           D+ L   +H+  + SG  +     N L+  Y K   LD A+++F GM  +R  ++W S+I
Sbjct: 153 DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y    +    LG+  +M R     +  T + +L A + LED   G Q H   IK+GF 
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272

Query: 192 NNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES-EMAFHVFV 249
            N  VG+ LI +Y    G   +   VF  +   D+   N M+  Y++  E  E A   F 
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMYGKH 308
            +    + PND +F  VIS C       +GKQ+H LA+K  +    ISV NA++ MY K 
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  ++A R+FD ++E N +S  ++I+GY + G   ++++ F   L+  I   S    +V+
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452

Query: 369 DGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
             C+    +E G    +    K     +    + ++D+  + G L  A  L+
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 158/347 (45%), Gaps = 38/347 (10%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVK-----------------------------FGVVR 293
           F +++  C     +  GK LH L +K                             F  + 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 294 EISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
           + +V   NAI+  Y K      A ++FD I E +L+S+  LIS Y   G    A+  F  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
             ++G+  D   L+ VI  C  C ++ L  QLH  A+  G+ S V +  AL+  Y K GD
Sbjct: 131 MREMGLDMDXFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 412 LKSARMLLDGF-SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
           L  A+ +  G    +    +N+++  + +    +    + LF +    G+  D  T + +
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQH--QEGSKALGLFQEMVRRGLNVDMFTLASV 246

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC-GSIDGAFQIFKGISDRD 529
           L+       L  G   H   IKTG+  +  VG+ LI +Y+KC G +    ++F+ I++ D
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306

Query: 530 IVSWNAMLSAYALH-GLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +V WN M+S Y+ +    + AL  F +M+  G+ P+D S + V+ AC
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISAC 353



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           F  LL    ++  L  G+SLH+  IK+         N  I +Y+KCG +  A + F+ IS
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           D ++ S+NA+++AYA       A  LF+++      PD +S   ++ A    G +   + 
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPE----PDLVSYNTLISAYADCGETAPALG 126

Query: 587 LFNEIEQI 594
           LF+ + ++
Sbjct: 127 LFSGMREM 134


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 192/647 (29%), Positives = 338/647 (52%), Gaps = 6/647 (0%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
            N L++++ +F  +  A  +F  M  R   +W  L+ GY   G ++  L +   +  +  
Sbjct: 72  GNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGI 131

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + + +T   +L +C+   D + G ++HA  ++  F+ +V V  +LI+MY   G    A  
Sbjct: 132 RPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARM 191

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F  +  +D    N MI  Y +  E      +F  +     +P+  T T+VIS C E LG
Sbjct: 192 LFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISAC-ELLG 250

Query: 276 VEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
            E  G QLH   V+      ISV N+++ MY   G  +EAE +F  +  R+++SWT +IS
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           G V +    KA+  +      G   D   +A+V+  C+    L++G++LH  A + G++ 
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL 370

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
            V +  +L+D+Y+K   ++ A  +      K    + ++++G   +I +   + ++ F +
Sbjct: 371 YVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGL--RINNRCFEALIFFRK 428

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
             L   +P+ VT    LS  A    L+ G+ +HA+++K G   D  + NA++ +Y +CG 
Sbjct: 429 MILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGR 487

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +  A   F  ++++D+ +WN +L+ YA  G G   + LF+ M      PDD++ + +L A
Sbjct: 488 MRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCA 546

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C  SG+   G+  F  ++  Y + P L+H+AC+VDLLGRAG+L+EA   I   P    P 
Sbjct: 547 CSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPA 606

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           +W  L++  ++  +     LA++ +   + +  G +IL+ N+YA  G  DE AKVR TM 
Sbjct: 607 IWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMK 666

Query: 695 DLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +  L  + GCSW+E+  K+H F++    HP+ +EI   L+   ++MK
Sbjct: 667 EEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMK 713



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 221/434 (50%), Gaps = 6/434 (1%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +V +G +L+SM+   G    A NVF  +  +D+   N ++  Y KAG  + A  ++  +L
Sbjct: 68  SVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRIL 127

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            +   P+ YTF +V+  C   + +  G+++H   V+F    ++ V NA++TMY K G   
Sbjct: 128 WAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVV 187

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +FD +  R+ ISW A+ISGY  +    + +  F    +L I  D   + +VI  C 
Sbjct: 188 SARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACE 247

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
           +  +  LG QLH + ++  Y  ++ +  +L+ +Y   G  K A  +  G  C+    +  
Sbjct: 248 LLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTT 307

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I+SG ++ +  D+   +  +    + G  PD VT + +LS  AS   L  G  LH  + +
Sbjct: 308 IISGCVDNLLPDK--ALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAER 365

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           TG+   V+V N+LI MY+KC  I+ A +IF  I D+D++SW ++++   ++     AL+ 
Sbjct: 366 TGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIF 425

Query: 553 FEEMKREGFAPDDISILGVLQACIYSG-LSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           F +M  +   P+ ++++  L AC   G L  G     + ++   G    L +   ++DL 
Sbjct: 426 FRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPN--AILDLY 482

Query: 612 GRAGRLSEAMNLIN 625
            R GR+  A+N  N
Sbjct: 483 VRCGRMRTALNQFN 496



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 240/488 (49%), Gaps = 12/488 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++   G+ DL  G+ VHA +++     D    N LI +Y K   +  A+ LFD M 
Sbjct: 138 FPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMP 197

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  I+W ++I GY ++ +    L +   M       +  T + ++ AC LL D   G Q
Sbjct: 198 TRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQ 257

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H++ +++ ++ N+ V  SLI MY   G ++EAE+VF G+  +DV     +I        
Sbjct: 258 LHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLL 317

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + A   +  +  +   P++ T  +V+S C     ++ G +LH LA + G +  + V N+
Sbjct: 318 PDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANS 377

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K    E+A  +F  I ++++ISWT++I+G   +    +A+  F + + L    +
Sbjct: 378 LIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMI-LKSKPN 436

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  L + +  C+    L  G ++H  A+K G   D  L  A++D+Y + G +++A   L+
Sbjct: 437 SVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTA---LN 493

Query: 421 GFSC--KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            F+   K    +N +L+G+ +K       VM LF +   + + PD VTF  LL   +   
Sbjct: 494 QFNLNEKDVGAWNILLTGYAQK--GKGAMVMELFKRMVESEINPDDVTFISLLCACSRSG 551

Query: 479 CLVRGRSLHAYSIKTGY--AADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNA 535
            +  G   +   +K  Y    ++     ++ +  + G ++ A +  + +  + D   W A
Sbjct: 552 MVTEGLE-YFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGA 610

Query: 536 MLSAYALH 543
           +L+A  +H
Sbjct: 611 LLNACRIH 618



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 17/218 (7%)

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
           L  VRLG AL+ ++ + GD+ +A  +      +    +N ++ G+ +    DE   + L+
Sbjct: 66  LLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDE--ALCLY 123

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            +   AG+ PD  TF  +L   A    LVRGR +HA+ ++  +  DV V NALITMY KC
Sbjct: 124 HRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKC 183

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G +  A  +F  +  RD +SWNAM+S Y  +      L LF  M+     PD +++  V+
Sbjct: 184 GDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVI 243

Query: 573 QAC---------------IYSGLSEGGICLFNEIEQIY 595
            AC               +     +G I ++N + Q+Y
Sbjct: 244 SACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMY 281


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/687 (27%), Positives = 354/687 (51%), Gaps = 7/687 (1%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           + +P LVK          G + H  ++  G  +D++ A +LIN Y+KF     A+K+FD 
Sbjct: 49  HTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDT 108

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV-ILEACSLLEDRIF 177
           M  R+ + WT++I  Y   G+++    +A  MY    +      SV +L   S + + + 
Sbjct: 109 MDDRNVVPWTTMIGCYTRAGEHD----VAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVH 164

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
            + +HA  I+ GF ++V +  S++++Y   G   +A+ +F  +  +DV   N ++  Y +
Sbjct: 165 LQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQ 224

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G       + + + +   EP+  TF +++S       +  GK +HG  ++ G+ ++  +
Sbjct: 225 LGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI 284

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             +++ MY K G    A R+F+ +  +++ISWTA+ISG V++     A+  F   L   +
Sbjct: 285 ETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRV 344

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
              ++ +A+V+  C+   +  LG  +HG+ ++     D+    +LV +YAK G L+ +  
Sbjct: 345 MPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCS 404

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D  S +    +NAI+SG  +         ++LF++ R A   PD +T   LL   AS 
Sbjct: 405 VFDRMSRRDIVSWNAIVSGHAQN--GHLCKALLLFNEMRKARQRPDSITVVSLLQACASI 462

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L +G+ +H +  K+     +++  AL+ MY+KCG +  A + F  +  +D+VSW++++
Sbjct: 463 GALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSII 522

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y  HG G+ AL ++ +    G  P+ +  L +L AC ++GL + G+  F+ + + +G+
Sbjct: 523 AGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGI 582

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P LEH AC+VDLL RAGR+ EA +         S  +   L+   +   N +   + ++
Sbjct: 583 EPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAR 642

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            ++ L+P +AG+++ +++ YA     D   +V T M  L L K  G S+IE+   +  F 
Sbjct: 643 EIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFF 702

Query: 718 ASGKDHPESEEIYSKLDLLNDEMKLKV 744
                HP+ EEI  ++ LLN   +  +
Sbjct: 703 TDHSSHPQFEEIIDRVLLLNKRRRFNI 729



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 263/516 (50%), Gaps = 7/516 (1%)

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
           ++ ++I      G +  VL     M  ++   + HT   +++AC+ L+    G   H   
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           I  G+ ++ ++ TSLI+ Y   G  + A  VF  +  ++V     MI  Y +AGE ++AF
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            ++  +     +P+  T   ++S   E + ++    LH   +++G   ++++ N+++ +Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALANSMLNVY 191

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G  E+A+ +F+ +  R++ISW +L+SGY + G+  + +   +     GI  D     
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +++   ++ S L +G  +HG  ++ G   D  + T+L+ +Y K G++ SA  + +G   K
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               + A++SG ++   D  +  + +F +   + + P   T + +L+  A       G S
Sbjct: 312 DVISWTAMISGLVQN--DCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTS 369

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +H Y ++     D+   N+L+TMYAKCG ++ +  +F  +S RDIVSWNA++S +A +G 
Sbjct: 370 VHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGH 429

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
              ALLLF EM++    PD I+++ +LQAC   G    G  + N + +   L P +    
Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTK-SCLGPCILIDT 488

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            +VD+  + G L  A    +  P  +  + W ++++
Sbjct: 489 ALVDMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIA 523



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 15/262 (5%)

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
           T  +NAI++      A    DV++ +S        PD  TF  L+    S      G S 
Sbjct: 13  TKSYNAIINRL--STAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSF 70

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H   I  GY++D  +  +LI  Y+K G    A ++F  + DR++V W  M+  Y   G  
Sbjct: 71  HQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEH 130

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE--GGICLFNEIEQIYGLRPILEHF 604
             A  ++  M+R+G  P  +++LG+L     SG+ E     CL   + Q YG    +   
Sbjct: 131 DVAFSMYNIMRRQGIQPSSVTMLGLL-----SGVLELVHLQCLHACVIQ-YGFGSDVALA 184

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK--FSILASKRLLDL 662
             M+++  + GR+ +A  L      +   + W +LVS    + N +    +L   +   +
Sbjct: 185 NSMLNVYCKCGRVEDAQALFELMD-ARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGI 243

Query: 663 EPKDA--GSFILVSNMYAGQGM 682
           EP     GS +  + M +  G+
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGV 265


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/706 (26%), Positives = 348/706 (49%), Gaps = 63/706 (8%)

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
           D A  + + +    A+ W  LI+ ++  G  +S + ++C M R+  + +  T   +L+AC
Sbjct: 106 DYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKAC 165

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK---DVR 226
             L     G   H     +GFE+NVF+  +L++MY   G   EA  +F  +  +   DV 
Sbjct: 166 GELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 225

Query: 227 CVNFMILEYNKAGESEMAFHVF------VHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             N ++  + K+  +  A  +F      VH   ++   +  +  N++  C     V + K
Sbjct: 226 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTK 285

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++HG A++ G   ++ VGNA++  Y K G+ E A ++F+ +  ++++SW A+++GY +SG
Sbjct: 286 EVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSG 345

Query: 341 H-----------------------------------GGKAINGFLEFLDLGICCDSSCLA 365
           +                                     +A+N F + +  G   +   + 
Sbjct: 346 NFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTII 405

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLS----------DVRLGTALVDIYAKGGDLKSA 415
           +V+  C+       G ++H +++K+  L+          D+ +  AL+D+Y+K    K+A
Sbjct: 406 SVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 465

Query: 416 RMLLDGFSC--KYTAEFNAILSGFMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLL 471
           R + D      +    +  ++ G  +    D  D + LF +      G+ P+  T S +L
Sbjct: 466 RSIFDDIPLEERNVVTWTVMIGGHAQY--GDSNDALKLFVEMISEPYGVAPNAYTISCIL 523

Query: 472 SLSASQACLVRGRSLHAYSIKTGY--AADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
              A  A +  G+ +HAY ++     ++   V N LI MY+KCG +D A  +F  +S + 
Sbjct: 524 MACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKS 583

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
            +SW +M++ Y +HG G  AL +F++M++ GF PDDI+ L VL AC + G+ + G+  F+
Sbjct: 584 AISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFD 643

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            +   YGL P  EH+AC +DLL R+GRL +A   +   P   + ++W  L+S  ++ +N 
Sbjct: 644 SMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNV 703

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           + +  A  +L+++  ++ GS+ L+SN+YA  G   + A++R  M    + K  GCSW++ 
Sbjct: 704 ELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQG 763

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
                 F    + HP S +IY+ L+ L D +K +     + F L D
Sbjct: 764 QKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHD 809



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 253/566 (44%), Gaps = 73/566 (12%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K        + G A H  +  +G +++ F  N L+ +Y++   L+ A  +FD +  
Sbjct: 159 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 218

Query: 122 R---SAITWTSLIKGYLDDGDYESVLGIACDM--YRSEEKFNEHTCSV----ILEACSLL 172
           R     I+W S++  ++   +  + L +   M     E+  NE +  +    IL AC  L
Sbjct: 219 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 278

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
           +     +++H  AI++G   +VFVG +LI  Y   G    A  VF  + +KDV   N M+
Sbjct: 279 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 338

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFE----------------------------------- 257
             Y+++G  E AF +F ++   +                                     
Sbjct: 339 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 398

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVK---------FGVVRE-ISVGNAIVTMYGK 307
           PN  T  +V+S C       +G ++H  ++K         FG   E + V NA++ MY K
Sbjct: 399 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 458

Query: 308 HGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAINGFLEFLD--LGICCDSSC 363
               + A  +FD I   ERN+++WT +I G+ + G    A+  F+E +    G+  ++  
Sbjct: 459 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 518

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYL--SDVRLGTALVDIYAKGGDLKSARMLLDG 421
           ++ ++  C+  + + +G Q+H + ++H     S   +   L+D+Y+K GD+ +AR + D 
Sbjct: 519 ISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDS 578

Query: 422 FSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            S K    + ++++G+ M     +  D+   F + R AG  PD +TF  L+ L A   C 
Sbjct: 579 MSQKSAISWTSMMTGYGMHGRGSEALDI---FDKMRKAGFVPDDITF--LVVLYACSHCG 633

Query: 481 VRGRSLHAY---SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAM 536
           +  + L  +   S   G           I + A+ G +D A++  K +  +   V W A+
Sbjct: 634 MVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVAL 693

Query: 537 LSAYALHG---LGKGALLLFEEMKRE 559
           LSA  +H    L + AL    EM  E
Sbjct: 694 LSACRVHSNVELAEHALNKLVEMNAE 719



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 194/440 (44%), Gaps = 63/440 (14%)

Query: 52  SERTLLFNDWP--------QLVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLI 100
           S+ TL+ ++ P         +V I    G LK     + VH   +++G+  D F  N LI
Sbjct: 248 SKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALI 307

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
           + YAK   ++ A K+F+ M  +  ++W +++ GY   G++E+   +  +M +     +  
Sbjct: 308 DAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVV 367

Query: 161 TCSVIL----------EACSLLEDRIF-------------------------GEQIHAFA 185
           T + ++          EA +L    IF                         G +IHA++
Sbjct: 368 TWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYS 427

Query: 186 IKS----------GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF--MIL 233
           +K+          G + ++ V  +LI MY     F+ A ++F  +  ++   V +  MI 
Sbjct: 428 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 487

Query: 234 EYNKAGESEMAFHVFVHLLSSDF--EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
            + + G+S  A  +FV ++S  +   PN YT + ++  C     +  GKQ+H   ++   
Sbjct: 488 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHR 547

Query: 292 VREIS--VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
               +  V N ++ MY K G  + A  +FD++S+++ ISWT++++GY   G G +A++ F
Sbjct: 548 YESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 607

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAK 408
            +    G   D      V+  CS C  ++ GL      +  +G           +D+ A+
Sbjct: 608 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLAR 667

Query: 409 GGDLKSARMLLDGFSCKYTA 428
            G L  A   +     + TA
Sbjct: 668 SGRLDKAWRTVKDMPMEPTA 687



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 7/303 (2%)

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           S+G  +V  Y   G ++ A  + + ++    + W  LI  +++ G    AIN     L  
Sbjct: 90  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 149

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   D   L  V+  C    +   G   HG    +G+ S+V +  ALV +Y++ G L+ A
Sbjct: 150 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 209

Query: 416 RMLLDGFSCKYTAE---FNAILSGFMEK----IADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            M+ D  + +   +   +N+I+S  ++      A D    M L   ++      D ++  
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 269

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L    S   + + + +H  +I+ G   DV VGNALI  YAKCG ++ A ++F  +  +
Sbjct: 270 NILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 329

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D+VSWNAM++ Y+  G  + A  LF+ M++E    D ++   V+      G S   + LF
Sbjct: 330 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 389

Query: 589 NEI 591
            ++
Sbjct: 390 RQM 392


>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 192/581 (33%), Positives = 315/581 (54%), Gaps = 14/581 (2%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ C  L  +   +Q HA  + +GF  N F+ T L+S Y   G    +  VF  +  K 
Sbjct: 34  LLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESVEAKS 93

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V   N +I  Y K  +   A  +F  +  +   P+DYT   V  V  E   +  GK +HG
Sbjct: 94  VYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGKLIHG 153

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR------ 338
             ++ G V ++ VGN++++MY + G   +A ++FD    RN+ S+  +ISG         
Sbjct: 154 KGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALENCNF 213

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVID-GCSVCSNLELGLQLHGFAIKHG----YL 393
           + H   + N FL     G   D+  +A+++   C      + G +LH + +K+G      
Sbjct: 214 TSHDDLS-NFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMD 272

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           SDV LG++L+D+Y++   +   R + D    +    + A+++G+++  A D+  +++L +
Sbjct: 273 SDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDA-LVLLRA 331

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
            Q   G+ P+ V+    L      A L+ G+ +H +SIK     DV + NALI MY+KCG
Sbjct: 332 MQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCG 391

Query: 514 SIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           S+D A + F+  S  +D ++W++M+SAY LHG G+ A++ + +M ++GF PD I+++GVL
Sbjct: 392 SLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMITVVGVL 451

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC  SGL + GI ++  +   Y ++P +E  AC+VD+LGR+G+L +A+  I   P    
Sbjct: 452 SACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEFIKEMPLDPG 511

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
           P +W +L++ S +  NS+   LA + LL+LEP++  ++I +SN YA     D   +VRT 
Sbjct: 512 PSVWGSLLTASVIHGNSRTRDLAYRHLLELEPENPSNYISLSNTYASDRRWDVVTEVRTI 571

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           M +  L K  GCSWI I  K H F  + K HP S  IY  L
Sbjct: 572 MKERGLKKVPGCSWITISGKTHSFSVADKAHPSSSLIYEML 612



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 266/542 (49%), Gaps = 25/542 (4%)

Query: 31  TFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQ 90
           TFS    +   Y  +  S++ + ++LL      L+++ I     KL Q  HA +L +G  
Sbjct: 6   TFSFTLTTSRYYTSATVSLAHTPQSLL-----HLLQLCIDLRSQKLAQQSHAQILANGFA 60

Query: 91  NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM 150
            + F A  L++ YA    L  ++ +F+ +  +S   W SLI GY+ + D+   L +  +M
Sbjct: 61  QNAFLATRLVSAYATCGELATSRFVFESVEAKSVYLWNSLINGYVKNHDFRQALALFREM 120

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
            R+    +++T + + +    LED + G+ IH   I+ GF ++V VG SL+SMY   G F
Sbjct: 121 GRNGMLPDDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEF 180

Query: 211 REAENVFRGLAYKDVRCVNFMI-----LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
            +A  VF    +++V   N +I     LE       +   + F+ +    F+ + +T  +
Sbjct: 181 GDAVKVFDETPHRNVGSFNVVISGCAALENCNFTSHDDLSNFFLRMQCEGFKADAFTVAS 240

Query: 266 VISVCYENLGV-EEGKQLHGLAVKFGV----VREISVGNAIVTMYGKHGMSEEAERMFDA 320
           ++ VC  + G  + G++LH   VK G+      ++ +G++++ MY +        R+FD 
Sbjct: 241 LLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQ 300

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDL--GICCDSSCLATVIDGCSVCSNLE 378
           +  RN+  WTA+I+GYV++G    A+   L  + +  GI  +   L + +  C + + L 
Sbjct: 301 MKNRNVYVWTAMINGYVQNGAPDDALV-LLRAMQMKDGIRPNKVSLISALPACGLLAGLI 359

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFNAILSGF 437
            G Q+HGF+IK     DV L  AL+D+Y+K G L  AR   +  S  K    +++++S +
Sbjct: 360 GGKQIHGFSIKMELNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAY 419

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-- 495
              +    E+ ++ + +    G +PD +T   +LS  +    +  G S++  S+ T Y  
Sbjct: 420 --GLHGRGEEAIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYK-SLMTKYEI 476

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGLGKGALLLFE 554
              V +   ++ M  + G +D A +  K +  D     W ++L+A  +HG  +   L + 
Sbjct: 477 KPTVEICACVVDMLGRSGQLDQALEFIKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYR 536

Query: 555 EM 556
            +
Sbjct: 537 HL 538


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/706 (26%), Positives = 348/706 (49%), Gaps = 63/706 (8%)

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
           D A  + + +    A+ W  LI+ ++  G  +S + ++C M R+  + +  T   +L+AC
Sbjct: 113 DYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKAC 172

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK---DVR 226
             L     G   H     +GFE+NVF+  +L++MY   G   EA  +F  +  +   DV 
Sbjct: 173 GELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 232

Query: 227 CVNFMILEYNKAGESEMAFHVF------VHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             N ++  + K+  +  A  +F      VH   ++   +  +  N++  C     V + K
Sbjct: 233 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTK 292

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++HG A++ G   ++ VGNA++  Y K G+ E A ++F+ +  ++++SW A+++GY +SG
Sbjct: 293 EVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSG 352

Query: 341 H-----------------------------------GGKAINGFLEFLDLGICCDSSCLA 365
           +                                     +A+N F + +  G   +   + 
Sbjct: 353 NFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTII 412

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLS----------DVRLGTALVDIYAKGGDLKSA 415
           +V+  C+       G ++H +++K+  L+          D+ +  AL+D+Y+K    K+A
Sbjct: 413 SVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 472

Query: 416 RMLLDGFSC--KYTAEFNAILSGFMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLL 471
           R + D      +    +  ++ G  +    D  D + LF +      G+ P+  T S +L
Sbjct: 473 RSIFDDIPLEERNVVTWTVMIGGHAQY--GDSNDALKLFVEMISEPYGVAPNAYTISCIL 530

Query: 472 SLSASQACLVRGRSLHAYSIKTGY--AADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
              A  A +  G+ +HAY ++     ++   V N LI MY+KCG +D A  +F  +S + 
Sbjct: 531 MACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKS 590

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
            +SW +M++ Y +HG G  AL +F++M++ GF PDDI+ L VL AC + G+ + G+  F+
Sbjct: 591 AISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFD 650

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            +   YGL P  EH+AC +DLL R+GRL +A   +   P   + ++W  L+S  ++ +N 
Sbjct: 651 SMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNV 710

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           + +  A  +L+++  ++ GS+ L+SN+YA  G   + A++R  M    + K  GCSW++ 
Sbjct: 711 ELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQG 770

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
                 F    + HP S +IY+ L+ L D +K +     + F L D
Sbjct: 771 QKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHD 816



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 253/566 (44%), Gaps = 73/566 (12%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K        + G A H  +  +G +++ F  N L+ +Y++   L+ A  +FD +  
Sbjct: 166 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 225

Query: 122 R---SAITWTSLIKGYLDDGDYESVLGIACDM--YRSEEKFNEHTCSV----ILEACSLL 172
           R     I+W S++  ++   +  + L +   M     E+  NE +  +    IL AC  L
Sbjct: 226 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 285

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
           +     +++H  AI++G   +VFVG +LI  Y   G    A  VF  + +KDV   N M+
Sbjct: 286 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 345

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFE----------------------------------- 257
             Y+++G  E AF +F ++   +                                     
Sbjct: 346 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 405

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVK---------FGVVRE-ISVGNAIVTMYGK 307
           PN  T  +V+S C       +G ++H  ++K         FG   E + V NA++ MY K
Sbjct: 406 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 465

Query: 308 HGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAINGFLEFLD--LGICCDSSC 363
               + A  +FD I   ERN+++WT +I G+ + G    A+  F+E +    G+  ++  
Sbjct: 466 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 525

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYL--SDVRLGTALVDIYAKGGDLKSARMLLDG 421
           ++ ++  C+  + + +G Q+H + ++H     S   +   L+D+Y+K GD+ +AR + D 
Sbjct: 526 ISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDS 585

Query: 422 FSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            S K    + ++++G+ M     +  D+   F + R AG  PD +TF  L+ L A   C 
Sbjct: 586 MSQKSAISWTSMMTGYGMHGRGSEALDI---FDKMRKAGFVPDDITF--LVVLYACSHCG 640

Query: 481 VRGRSLHAY---SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAM 536
           +  + L  +   S   G           I + A+ G +D A++  K +  +   V W A+
Sbjct: 641 MVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVAL 700

Query: 537 LSAYALHG---LGKGALLLFEEMKRE 559
           LSA  +H    L + AL    EM  E
Sbjct: 701 LSACRVHSNVELAEHALNKLVEMNAE 726



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 194/440 (44%), Gaps = 63/440 (14%)

Query: 52  SERTLLFNDWP--------QLVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLI 100
           S+ TL+ ++ P         +V I    G LK     + VH   +++G+  D F  N LI
Sbjct: 255 SKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALI 314

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
           + YAK   ++ A K+F+ M  +  ++W +++ GY   G++E+   +  +M +     +  
Sbjct: 315 DAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVV 374

Query: 161 TCSVIL----------EACSLLEDRIF-------------------------GEQIHAFA 185
           T + ++          EA +L    IF                         G +IHA++
Sbjct: 375 TWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYS 434

Query: 186 IKS----------GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF--MIL 233
           +K+          G + ++ V  +LI MY     F+ A ++F  +  ++   V +  MI 
Sbjct: 435 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 494

Query: 234 EYNKAGESEMAFHVFVHLLSSDF--EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
            + + G+S  A  +FV ++S  +   PN YT + ++  C     +  GKQ+H   ++   
Sbjct: 495 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHR 554

Query: 292 VREIS--VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
               +  V N ++ MY K G  + A  +FD++S+++ ISWT++++GY   G G +A++ F
Sbjct: 555 YESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 614

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAK 408
            +    G   D      V+  CS C  ++ GL      +  +G           +D+ A+
Sbjct: 615 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLAR 674

Query: 409 GGDLKSARMLLDGFSCKYTA 428
            G L  A   +     + TA
Sbjct: 675 SGRLDKAWRTVKDMPMEPTA 694



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 7/303 (2%)

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           S+G  +V  Y   G ++ A  + + ++    + W  LI  +++ G    AIN     L  
Sbjct: 97  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 156

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   D   L  V+  C    +   G   HG    +G+ S+V +  ALV +Y++ G L+ A
Sbjct: 157 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 216

Query: 416 RMLLDGFSCKYTAE---FNAILSGFMEK----IADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            M+ D  + +   +   +N+I+S  ++      A D    M L   ++      D ++  
Sbjct: 217 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 276

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L    S   + + + +H  +I+ G   DV VGNALI  YAKCG ++ A ++F  +  +
Sbjct: 277 NILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 336

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D+VSWNAM++ Y+  G  + A  LF+ M++E    D ++   V+      G S   + LF
Sbjct: 337 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 396

Query: 589 NEI 591
            ++
Sbjct: 397 RQM 399


>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 599

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 192/581 (33%), Positives = 310/581 (53%), Gaps = 9/581 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           ++E C+ ++     +QIHA +I S      F+ T +I+ +    C   A  VF      D
Sbjct: 12  LIETCTNIQQL---KQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPD 68

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
               N MI  Y+ +    +A  ++  + +  +   + YT+  V   C     VE+GK++H
Sbjct: 69  GFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVH 128

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           G+ V+ G   +  + ++++  Y   G    A+++FD    ++++ W ALI+GY R G   
Sbjct: 129 GVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVL 188

Query: 344 KAINGFLEFLDLG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRLGTA 401
            +   F E +++  +  +   +  +I  C    NL+LG  +HG+ +K   L + V+L  A
Sbjct: 189 DSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAA 248

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L+++Y K G L  AR L D    K T  +N+++ G+ +  + +E  V+ L  +  L+ ++
Sbjct: 249 LINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNE--VIELLREMHLSNLK 306

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           PD  T S +LS  A       G  +H ++ K G   DV +G ALI MYAKCG I  A ++
Sbjct: 307 PDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKG-IWDVFIGTALIDMYAKCGFIGAARKV 365

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           F  +++R++ +WNA+LS YA HG  + A+ LF EM+  G  PD I+ L VL AC +SGL 
Sbjct: 366 FDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLV 425

Query: 582 EGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           E G   F+ + Q Y + P +EH+ CMVDLLGRAG L EA  LI       + ++W  L+S
Sbjct: 426 ENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLS 485

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
              +  N +    A+  ++ L   D GS+++++N+YA     +    VR  M +  + K 
Sbjct: 486 ACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKS 545

Query: 702 AGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
            GCS IEI   +H FV + K HP SEEIYS LD L+ ++K+
Sbjct: 546 HGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKM 586



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 227/476 (47%), Gaps = 16/476 (3%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA  + S      F    +IN +     LD A ++F+         + ++I+ Y   
Sbjct: 23  KQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSS 82

Query: 138 GDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
                 + I   M   +    +++T   + +AC+       G+++H   ++ G+E + F+
Sbjct: 83  QTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFL 142

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SD 255
            +SL++ Y   G    A+ VF     KDV   N +I  Y + G    +F VF  ++   +
Sbjct: 143 QSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKE 202

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE-ISVGNAIVTMYGKHGMSEEA 314
             PN+ T   +I  C E+  ++ G+ +HG  +K  V+RE + +  A++ +Y K G  + A
Sbjct: 203 VRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGA 262

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            ++FD I E+N + W +LI GY + G   + I    E     +  D   ++ V+  C+  
Sbjct: 263 RKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQM 322

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
               LG  +H FA K G + DV +GTAL+D+YAK G + +AR + D  + +  A +NAIL
Sbjct: 323 GAFNLGNWVHRFAEKKG-IWDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAIL 381

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-----LHAY 489
           SG+        E  + LFS+ R +G  PD +TF  +L   A    +  G+      L  Y
Sbjct: 382 SGYASH--GQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYY 439

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK-GISDRDIVSWNAMLSAYALHG 544
            I       V     ++ +  + G +  A ++ K  + + ++V W A+LSA ++HG
Sbjct: 440 KI----PPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHG 491



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 168/362 (46%), Gaps = 4/362 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P + K       ++ G+ VH  +++ G + D F  ++L+N Y     +  AQ++FD   
Sbjct: 108 YPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFD 167

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGE 179
            +  + W +LI GY   G      G+  +M   +E + NE T   ++ AC   ++   G 
Sbjct: 168 AKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGR 227

Query: 180 QIHAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            IH + +K       V +  +LI++Y   G    A  +F  +  K+    N +I  Y + 
Sbjct: 228 AIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQI 287

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G       +   +  S+ +P+ +T + V+S C +      G  +H  A K G + ++ +G
Sbjct: 288 GSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKG-IWDVFIG 346

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A++ MY K G    A ++FD ++ERN+ +W A++SGY   G    AI  F E  + G  
Sbjct: 347 TALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGAR 406

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARM 417
            DS     V+  C+    +E G Q     +++  +   V     +VD+  + G L+ AR 
Sbjct: 407 PDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARE 466

Query: 418 LL 419
           L+
Sbjct: 467 LI 468



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 4/275 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANN-LINLYAKFNRLDVAQKLFDGMLVR 122
           L+   I S +LKLG+A+H +++K     +  +    LINLY K   LD A+KLFD +  +
Sbjct: 213 LIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEK 272

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + + W SLI GY   G    V+ +  +M+ S  K +  T S +L AC+ +     G  +H
Sbjct: 273 NTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVH 332

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
            FA K G   +VF+GT+LI MY   G    A  VF  +  ++V   N ++  Y   G++E
Sbjct: 333 RFAEKKGIW-DVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAE 391

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-FGVVREISVGNAI 301
            A  +F  +  S   P+  TF  V+  C  +  VE GKQ   L ++ + +   +     +
Sbjct: 392 SAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCM 451

Query: 302 VTMYGKHGMSEEAERMFD-AISERNLISWTALISG 335
           V + G+ G+ +EA  +    + E N++ W AL+S 
Sbjct: 452 VDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSA 486


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 193/651 (29%), Positives = 327/651 (50%), Gaps = 45/651 (6%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+  H   +K G   + F  N L+ +Y K   ++ A +LFDGM   + +++T+++ G + 
Sbjct: 159 GRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQ 218

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACS--------LLEDRIFGEQIHAFAIKS 188
            G  +  L +   M RS  + +    S +L +C+        ++     G+ IHA  ++ 
Sbjct: 219 AGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRK 278

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF ++  VG SLI MY       EA  VF  L        N +I  + +AG    A  V 
Sbjct: 279 GFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVL 338

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +  S  EPN+ T++N+++ C +                    R++             
Sbjct: 339 NLMEESGSEPNEVTYSNMLASCIK-------------------ARDVL------------ 367

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
                A  MFD IS  ++ +W  L+SGY +       +  F       +  D + LA ++
Sbjct: 368 ----SARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVIL 423

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS    L+LG Q+H  +++    +D+ + + LVD+Y+K G +  AR++ +  + +   
Sbjct: 424 SSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVV 483

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N+++SG    I    E+    F Q R  GM P   +++ +++  A  + + +GR +HA
Sbjct: 484 CWNSMISGL--AIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHA 541

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             +K GY  +V VG+ALI MYAKCG++D A   F  +  ++IV+WN M+  YA +G G+ 
Sbjct: 542 QIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEK 601

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A+ LFE M      PD ++ + VL  C +SGL +  I  FN +E  YG+ P+ EH+ C++
Sbjct: 602 AVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLI 661

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           D LGRAGRL E   LI++ P  + P++W  L++   +  N++    A+K L  L+PK+  
Sbjct: 662 DGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPS 721

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
            ++L+SN+YA  G   +A+ VR  M+   + K  G SWI+    +H F+ +
Sbjct: 722 PYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFMVA 772



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 239/529 (45%), Gaps = 52/529 (9%)

Query: 55  TLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQK 114
           T L N   +L  +S    D     A+ AF  +S  + + +  N  ++   +   LD A+ 
Sbjct: 43  TFLINRLVELYSVSGLPCD-----ALRAF--RSLPRPNAYSYNAALSAARRAGDLDAARA 95

Query: 115 LFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED 174
           L D M  R+ ++W ++I            L +   M R        T + +L AC  +  
Sbjct: 96  LLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAA 155

Query: 175 RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
              G + H  A+K G + N+FV  +L+ MY   G   +A  +F G+A  +      M+  
Sbjct: 156 LDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGG 215

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE--------EGKQLHGLA 286
             +AG  + A  +F  +  S    +    ++V+  C +    E         G+ +H L 
Sbjct: 216 LVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALI 275

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI 346
           V+ G   +  VGN+++ MY K    +EA ++FD++   + +SW  LI+G+ ++G   KA 
Sbjct: 276 VRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKA- 334

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
              LE L+L                         ++  G        S++ L + +    
Sbjct: 335 ---LEVLNL-------------------------MEESGSEPNEVTYSNM-LASCI---- 361

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
            K  D+ SAR + D  S      +N +LSG+ ++  +  +D + LF + +   ++PD  T
Sbjct: 362 -KARDVLSARAMFDKISRPSVTTWNTLLSGYCQE--ELHQDTVELFRRMQHQNVQPDRTT 418

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
            + +LS  +    L  G  +H+ S++     D+ V + L+ MY+KCG I  A  IF  ++
Sbjct: 419 LAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMT 478

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +RD+V WN+M+S  A+H L + A   F++M+  G  P + S   ++ +C
Sbjct: 479 ERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSC 527



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 225/483 (46%), Gaps = 61/483 (12%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            +LGQ +HA +++ G  +D    N+LI++Y K  ++D A K+FD +   S ++W  LI G
Sbjct: 265 FRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITG 324

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC----SLLEDRIFGEQIHAFAIKSG 189
           +   G Y   L +   M  S  + NE T S +L +C     +L  R   ++I        
Sbjct: 325 FGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKIS------- 377

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
              +V    +L+S Y      ++   +FR + +++V                        
Sbjct: 378 -RPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNV------------------------ 412

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
                  +P+  T   ++S C   LG+ + G Q+H  +V+F +  ++ V + +V MY K 
Sbjct: 413 -------QPDRTTLAVILSSC-SRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKC 464

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A  +F+ ++ER+++ W ++ISG        +A + F +    G+    S  A++I
Sbjct: 465 GQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMI 524

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           + C+  S++  G Q+H   +K GY  +V +G+AL+D+YAK G++  AR+  D    K   
Sbjct: 525 NSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIV 584

Query: 429 EFNAIL-----SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +N ++     +GF EK  D  E   +L ++QR     PD VTF  +L+   S + LV  
Sbjct: 585 AWNEMIHGYAQNGFGEKAVDLFE--YMLTTEQR-----PDGVTFIAVLT-GCSHSGLVDE 636

Query: 484 RSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAY 540
                 S+++ Y    +  +   LI    + G +     +   +  + D + W  +L+A 
Sbjct: 637 AIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAAC 696

Query: 541 ALH 543
           A+H
Sbjct: 697 AVH 699



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 158/304 (51%), Gaps = 12/304 (3%)

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA ++   + G  + A  + D + +RN++SW  +I+   RS   G+A+  +   L  G+ 
Sbjct: 78  NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
                LA+V+  C   + L+ G + HG A+K G   ++ +  AL+ +Y K G ++ A  L
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRL 197

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            DG +      F A++ G ++  A   +D + LF++   +G+  DPV  S +L  S +QA
Sbjct: 198 FDGMASPNEVSFTAMMGGLVQ--AGSVDDALRLFARMCRSGVRVDPVAVSSVLG-SCAQA 254

Query: 479 C-----LVR----GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           C     +VR    G+ +HA  ++ G+ +D  VGN+LI MY KC  +D A ++F  + +  
Sbjct: 255 CASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNIS 314

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
            VSWN +++ +   G    AL +   M+  G  P++++   +L +CI +        +F+
Sbjct: 315 TVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFD 374

Query: 590 EIEQ 593
           +I +
Sbjct: 375 KISR 378



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 183/408 (44%), Gaps = 45/408 (11%)

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           A +S    N +   + +S    +G    A  +   +  ++V   N +I    ++  +  A
Sbjct: 65  AFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEA 124

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             ++  +L     P  +T  +V+S C     +++G++ HGLAVK G+   + V NA++ M
Sbjct: 125 LELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGM 184

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  E+A R+FD ++  N +S+TA++ G V++G    A+  F      G+  D   +
Sbjct: 185 YTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAV 244

Query: 365 ATVIDGCS--------VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           ++V+  C+        V     LG  +H   ++ G+ SD  +G +L+D+Y K   +  A 
Sbjct: 245 SSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAV 304

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            + D      T  +N +++GF +  A      + + +    +G EP+ VT+S +L+    
Sbjct: 305 KVFDSLPNISTVSWNILITGFGQ--AGSYAKALEVLNLMEESGSEPNEVTYSNMLA---- 358

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
            +C+               A DV+   A+                F  IS   + +WN +
Sbjct: 359 -SCI--------------KARDVLSARAM----------------FDKISRPSVTTWNTL 387

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           LS Y    L +  + LF  M+ +   PD  ++  +L +C   G+ + G
Sbjct: 388 LSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLG 435



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 2/265 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L LG  VH+  ++    ND F A+ L+++Y+K  ++ +A+ +F+ M  R  + W S+I
Sbjct: 430 GILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMI 489

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G       E        M  +     E + + ++ +C+ L     G QIHA  +K G++
Sbjct: 490 SGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYD 549

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            NV+VG++LI MY   G   +A   F  +  K++   N MI  Y + G  E A  +F ++
Sbjct: 550 QNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYM 609

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L+++  P+  TF  V++ C  +  V+E     + +   +G+         ++   G+ G 
Sbjct: 610 LTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGR 669

Query: 311 SEEAERMFDAIS-ERNLISWTALIS 334
             E E + D +  + + I W  L++
Sbjct: 670 LVEVEALIDNMPCKDDPIVWEVLLA 694



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 114/241 (47%), Gaps = 10/241 (4%)

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           + GDL +AR LLD    +    +N +++      ++   + + L+      G+ P   T 
Sbjct: 86  RAGDLDAARALLDEMPDRNVVSWNTVIAALAR--SERAGEALELYEGMLREGLVPTHFTL 143

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           + +LS   + A L  GR  H  ++K G   ++ V NAL+ MY KCG ++ A ++F G++ 
Sbjct: 144 ASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMAS 203

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
            + VS+ AM+      G    AL LF  M R G   D +++  VL +C  +  SE  +  
Sbjct: 204 PNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVR 263

Query: 588 FNEIEQIYGLRPILEHFA-------CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
              + Q      + + F         ++D+  +  ++ EA+ + +S P + S + W  L+
Sbjct: 264 AFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLP-NISTVSWNILI 322

Query: 641 S 641
           +
Sbjct: 323 T 323


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 182/552 (32%), Positives = 313/552 (56%), Gaps = 6/552 (1%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVF   ++I+ Y        A  +F  +   D+   N +I  Y   GE+  A  +F  + 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               + + +T + VI+ C +++G+    QLH +AV  G    +SV NA++T YGK+G  +
Sbjct: 133 EMGLDMDGFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 313 EAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           +A+R+F  +   R+ +SW ++I  Y +   G KA+  F E +  G+  D   LA+V+   
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTAEF 430
           +   +L  GLQ HG  IK G+  +  +G+ L+D+Y+K GG +   R + +  +      +
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N ++SG+ +   +  ED +  F Q +  G  P+  +F  ++S  ++ +   +G+ +H+ +
Sbjct: 311 NTMVSGYSQN-EEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369

Query: 491 IKTGYAADVI-VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           +K+   ++ I V NALI MY+KCG++  A ++F  +++ + VS N+M++ YA HG+   +
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LF+ M     AP  I+ + VL AC ++G  E G   FN +++ + + P  EH++CM+D
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGRAG+LSEA NLI   PF+   + W +L+   +   N + ++ A+ ++L LEP +A  
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++++SNMYA  G  +E A VR  M D  + K+ GCSWIE+  ++H FVA    HP  +EI
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEI 609

Query: 730 YSKLDLLNDEMK 741
           Y  L+ ++ +MK
Sbjct: 610 YEFLEEMSGKMK 621



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 213/460 (46%), Gaps = 50/460 (10%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD------------ 110
            L+K  I   DL  G+++H+  +KS     T+ +N+ I LY+K  RL             
Sbjct: 13  HLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP 72

Query: 111 -------------------VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
                              +A +LFD +     +++ +LI  Y D G+    LG+   M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
                 +  T S ++ AC   +D     Q+H+ A+ SGF++ V V  +L++ Y  +G   
Sbjct: 133 EMGLDMDGFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 212 EAENVFRGL-AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS-- 268
           +A+ VF G+   +D    N MI+ Y +  E   A  +F  ++      + +T  +V++  
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK--HGMSEEAERMFDAISERNL 326
            C E+L    G Q HG  +K G  +   VG+ ++ +Y K   GMS +  ++F+ I+E +L
Sbjct: 251 TCLEDL--SGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMS-DCRKVFEEITEPDL 307

Query: 327 ISWTALISGYVRSGHG-GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
           + W  ++SGY ++      A+  F +   +G   +      VI  CS  S+   G Q+H 
Sbjct: 308 VLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHS 367

Query: 386 FAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
            A+K    S+ + +  AL+ +Y+K G+L+ AR L D  +   T   N++++G+ +     
Sbjct: 368 LALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQH--GI 425

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           E + + LF       + P  +TF  +LS     AC   GR
Sbjct: 426 EMESLHLFQWMLERQIAPTSITFISVLS-----ACAHTGR 460



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 168/352 (47%), Gaps = 5/352 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VRSAITWTSLI 131
           D+ L   +H+  + SG  +     N L+  Y K   LD A+++F GM  +R  ++W S+I
Sbjct: 153 DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y    +    LG+  +M R     +  T + +L A + LED   G Q H   IK+GF 
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272

Query: 192 NNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES-EMAFHVFV 249
            N  VG+ LI +Y    G   +   VF  +   D+   N M+  Y++  E  E A   F 
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMYGKH 308
            +    + PND +F  VIS C       +GKQ+H LA+K  +    ISV NA++ MY K 
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  ++A R+FD ++E N +S  ++I+GY + G   ++++ F   L+  I   S    +V+
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452

Query: 369 DGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
             C+    +E G    +    K     +    + ++D+  + G L  A  L+
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 158/347 (45%), Gaps = 38/347 (10%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVK-----------------------------FGVVR 293
           F +++  C     +  GK LH L +K                             F  + 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 294 EISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
           + +V   NAI+  Y K      A ++FD I E +L+S+  LIS Y   G    A+  F  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
             ++G+  D   L+ VI  C  C ++ L  QLH  A+  G+ S V +  AL+  Y K GD
Sbjct: 131 MREMGLDMDGFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 412 LKSARMLLDGF-SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
           L  A+ +  G    +    +N+++  + +    +    + LF +    G+  D  T + +
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQH--QEGSKALGLFQEMVRRGLNVDMFTLASV 246

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC-GSIDGAFQIFKGISDRD 529
           L+       L  G   H   IKTG+  +  VG+ LI +Y+KC G +    ++F+ I++ D
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306

Query: 530 IVSWNAMLSAYALH-GLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +V WN M+S Y+ +    + AL  F +M+  G+ P+D S + V+ AC
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISAC 353



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           F  LL    ++  L  G+SLH+  IK+         N  I +Y+KCG +  A + F+ IS
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           D ++ S+NA+++AYA       A  LF+++      PD +S   ++ A    G +   + 
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPE----PDLVSYNTLISAYADCGETAPALG 126

Query: 587 LFNEIEQI 594
           LF+ + ++
Sbjct: 127 LFSGMREM 134


>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
 gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
          Length = 762

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 187/622 (30%), Positives = 337/622 (54%), Gaps = 12/622 (1%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRS-EEKFNEHTCSVILE--ACSLLEDRIFG 178
           R+A TWT +++    DG     + +  DM R  E   ++ T + +L    C +       
Sbjct: 100 RNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPGCDV------- 152

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H    K GF  +V V  +L+  Y   G    A  VF  + ++D    N MI+  ++ 
Sbjct: 153 GTLHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQ 212

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G    A  +F  +     + + +TF+++++V    + +  G+Q+HGL V+      + V 
Sbjct: 213 GRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVN 272

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA++  Y K     + +++FD +SER+ +S+  +IS    +  GG A+  F +   LG  
Sbjct: 273 NALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFD 332

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
             +   A+++       ++++G Q+H   I HG   +  +G AL+D+Y+K G L +A+ +
Sbjct: 333 RRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTI 392

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               S K    + A+++G ++      E+ + LF   R AG+ PD  T S ++  S+S A
Sbjct: 393 FAYKSDKTAISWTALITGCVQN--GQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLA 450

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            +  GR LHAY  K+G+   V  G+AL+ MYAKCG +D A + F  + +++ ++WNA++S
Sbjct: 451 VIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVIS 510

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           AYA +G  K A+ +F+ M   G  PD ++ L VL AC ++GL+E  +  F+ +   Y + 
Sbjct: 511 AYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMS 570

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P  EH++C++D LGRAG   +   +I+  PF + P++W +++   ++  N   + +A+++
Sbjct: 571 PWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEK 630

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L  + P DA +++++SN+YA  G  + AA+V+  M D  + KE+G SW+EI  K++ F +
Sbjct: 631 LFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQKIYMFSS 690

Query: 719 SGKDHPESEEIYSKLDLLNDEM 740
           +   +P  +EI  +L+ L +EM
Sbjct: 691 NDHTNPMIDEIKKELERLYEEM 712



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 195/395 (49%), Gaps = 6/395 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +H  + K G        N L++ Y K   +  A+++F  M  R +IT+ ++I G    G 
Sbjct: 155 LHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGR 214

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
           +   L +   M R     +  T S +L   + + D   G QIH   +++    NVFV  +
Sbjct: 215 HGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNA 274

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMI--LEYNKAGESEMAFHVFVHLLSSDFE 257
           L+  Y       + + +F  ++ +D    N MI    +N+ G   MA  +F  + +  F+
Sbjct: 275 LLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCG--GMALQLFRDMQTLGFD 332

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
                + +++SV      ++ G+Q+H   +  G+  E  VGNA++ MY K GM + A+ +
Sbjct: 333 RRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTI 392

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F   S++  ISWTALI+G V++G   +A+  F +    G+  D +  ++++   S  + +
Sbjct: 393 FAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVI 452

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
            +G QLH +  K G++  V  G+AL+D+YAK G L  A    +    K +  +NA++S +
Sbjct: 453 GIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAY 512

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            +      ++ + +F      G+ PDPVTF  +L+
Sbjct: 513 AQY--GQAKNAIRMFDSMLHCGLCPDPVTFLSVLA 545



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 220/543 (40%), Gaps = 78/543 (14%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ ++ G  DL LG+ +H   +++    + F  N L++ Y+K + L   ++LFD M  R 
Sbjct: 240 LLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSERD 299

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEK--FNEHTC--SVILEACSLLEDRIFGE 179
            +++  +I        +    G+A  ++R  +   F+  T   + +L     L     G 
Sbjct: 300 NVSYNVMISA----CSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGR 355

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           QIHA  I  G     FVG +LI MY   G    A+ +F   + K       +I    + G
Sbjct: 356 QIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNG 415

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           ++E A  +F  +  +   P+  T ++++        +  G+QLH    K G +  +  G+
Sbjct: 416 QNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGS 475

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ MY K G  +EA R F+ + E+N I+W A+IS Y + G    AI  F   L  G+C 
Sbjct: 476 ALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCP 535

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D     +V+  C                  +G   +      L+  Y      K      
Sbjct: 536 DPVTFLSVLAACG----------------HNGLAEECMKYFDLMRYYYSMSPWK------ 573

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           + +SC       A     ++K+ D+                E DP+ +S +L      +C
Sbjct: 574 EHYSCVIDTLGRAGCFDKIQKVIDEMP-------------FEDDPIIWSSIL-----HSC 615

Query: 480 LVRGR----SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV---- 531
            + G     ++ A  + T    D      L  +YAK G+ +GA ++ K + DR +     
Sbjct: 616 RIYGNQDLATVAAEKLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVKKESG 675

Query: 532 -SW----------------NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
            SW                N M+       + K    L+EEM ++G+ PD    L ++  
Sbjct: 676 NSWVEIKQKIYMFSSNDHTNPMIDE-----IKKELERLYEEMDKQGYEPDTSCALHMVSM 730

Query: 575 CIY 577
             Y
Sbjct: 731 VFY 733



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 145/283 (51%), Gaps = 5/283 (1%)

Query: 53  ERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVA 112
            RTL    +  L+ ++     +K+G+ +HA L+  G   + F  N LI++Y+K   LD A
Sbjct: 333 RRTL---PYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAA 389

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL 172
           + +F     ++AI+WT+LI G + +G  E  L + CDM R+    +  TCS I+++ S L
Sbjct: 390 KTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSL 449

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
                G Q+HA+  KSG   +VF G++L+ MY   GC  EA   F  +  K+    N +I
Sbjct: 450 AVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVI 509

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             Y + G+++ A  +F  +L     P+  TF +V++ C  N   EE  +   L   +  +
Sbjct: 510 SAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSM 569

Query: 293 REISVG-NAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
                  + ++   G+ G  ++ +++ D +  E + I W++++
Sbjct: 570 SPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSIL 612


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 171/517 (33%), Positives = 288/517 (55%), Gaps = 3/517 (0%)

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
           C N ++     AG  E A H+FV +L  +   P+ +T    +  C     ++ G+ +   
Sbjct: 85  CYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAY 144

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
           AVK G++ +  V ++++ MY        A+ +FDA+ E  ++ W A+I+ Y+++G+  + 
Sbjct: 145 AVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEV 204

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +  F   L++G+  D   L +V+  C    + +LG  +  +  + G + +  L TAL+D+
Sbjct: 205 VEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDM 264

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           YAK G+L  AR L DG   +    ++A++SG+ +  AD   + + LFS+ +LA +EP+ V
Sbjct: 265 YAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQ--ADQCREALALFSEMQLAEVEPNDV 322

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T   +LS  A    L  G+ +H+Y  +   +  +I+G AL+  YAKCG ID A + F+ +
Sbjct: 323 TMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESM 382

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
             ++  +W A++   A +G G+ AL LF  M++    P D++ +GVL AC +S L E G 
Sbjct: 383 PVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGR 442

Query: 586 CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
             F+ + Q YG++P  EH+ C+VDLLGRAG + EA   I + P   + ++WR L+S   +
Sbjct: 443 RHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAV 502

Query: 646 MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
             N +    A K+++ L P  +G +IL+SN+YA  G    AA +R  M D  + K  GCS
Sbjct: 503 HKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCS 562

Query: 706 WIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
            IE+D  +  F A   DHP+ +EIY K++ + D +K+
Sbjct: 563 LIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKM 599



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 218/486 (44%), Gaps = 19/486 (3%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           PQL    I SG+L         LL++ + + T     L+       RL     L      
Sbjct: 33  PQLHAALIKSGELTGSPKCFHSLLEAAAASPT-----LLPYAVSLFRLGPRPPL------ 81

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQ 180
            S   +  L++  L  G  E  L +  +M        ++HT +  L++CS +     G  
Sbjct: 82  -STPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRG 140

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           I A+A+K G   + FV +SLI MY        A+ +F  +    V   N +I  Y K G 
Sbjct: 141 IQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGN 200

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
                 +F  +L      ++ T  +V++ C      + GK +     + G+VR  ++  A
Sbjct: 201 WMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTA 260

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K G   +A R+FD +  R++++W+A+ISGY ++    +A+  F E     +  +
Sbjct: 261 LIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPN 320

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              + +V+  C+V   LE G  +H +  +      + LGTALVD YAK G +  A    +
Sbjct: 321 DVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFE 380

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               K +  + A++ G        E   + LFS  R A +EP  VTF  +L ++ S +CL
Sbjct: 381 SMPVKNSWTWTALIKGMATNGRGRE--ALELFSSMRKASIEPTDVTFIGVL-MACSHSCL 437

Query: 481 VRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAML 537
           V     H  S+   Y       +   ++ +  + G ID A+Q  + +  + + V W A+L
Sbjct: 438 VEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALL 497

Query: 538 SAYALH 543
           S+ A+H
Sbjct: 498 SSCAVH 503


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 188/659 (28%), Positives = 334/659 (50%), Gaps = 51/659 (7%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D++ G+  H   +K G  N+ +  N L+ +YAK   +  A + F  +   + +++T+++ 
Sbjct: 123 DVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMG 182

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS--------------LLEDRIFG 178
           G  D         +   M R+    +  + S +L  CS              +L   + G
Sbjct: 183 GLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHG 242

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q+H   IK GFE+++ +  SL+ MY  +G    AE +F  +    V   N MI  Y + 
Sbjct: 243 QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQK 302

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            +S  A      +    FEP++ T+ N++  C ++  +E G+Q                 
Sbjct: 303 SQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQ----------------- 345

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
                             MFD +S  +L SW  ++SGY ++ +  +A+  F E     + 
Sbjct: 346 ------------------MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVH 387

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D + LA ++   +    LE G Q+H  + K  + +D+ L + L+ +Y+K G ++ A+ +
Sbjct: 388 PDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRI 447

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D  +      +N++++G      D E      F + R  GM P   +++ +LS  A  +
Sbjct: 448 FDRIAELDIVCWNSMMAGLSLNSLDKE--AFTFFKKMREKGMFPSQFSYATVLSCCAKLS 505

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L +GR +H+   + GY  D  VG+ALI MY+KCG +D A  +F  +  ++ V+WN M+ 
Sbjct: 506 SLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIH 565

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            YA +G G  A+LL+E+M   G  PD I+ + VL AC +SGL + GI +FN ++Q +G+ 
Sbjct: 566 GYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVE 625

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P+++H+ C++D LGRAGRL EA  LI+  P    P++W  L+S  ++ A+   +  A++ 
Sbjct: 626 PLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEE 685

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           L  L+P+++  ++L++N+Y+  G  D+A  VR  M+  ++ K+ G SWIE  + +  F+
Sbjct: 686 LFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFM 744



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 255/524 (48%), Gaps = 54/524 (10%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +HA +L+S   +DTF +N LI  YAK N +D +++LFD M  R   TW +++  Y  
Sbjct: 24  GKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCK 83

Query: 137 DGDYESVLGIACDM-YRSEEKFNEHTCSVILE-ACSLLEDRIFGEQIHAFAIKSGFENNV 194
             + E    +  +M  R+   +N    ++    AC  L D   G + H  +IK G +NN+
Sbjct: 84  ASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNI 143

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           +VG +L+ MY    C  +A   F  +   +      M+     + +   AF +F  +L +
Sbjct: 144 YVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRN 203

Query: 255 DFEPNDYTFTNVISVCYE----NLGVEE----------GKQLHGLAVKFGVVREISVGNA 300
               +  + ++V+ VC        G+ +          G+Q+H L +K G   ++ + N+
Sbjct: 204 RIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNS 263

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K+G  + AE +F  + E +++SW  +I+GY +     KAI    E+L       
Sbjct: 264 LLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAI----EYLQR----- 314

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
                               +Q HGF      ++ V +  A +    K GD+++ R + D
Sbjct: 315 --------------------MQYHGFEPDE--ITYVNMLVACI----KSGDIEAGRQMFD 348

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
           G S    + +N ILSG+ +   ++ ++ + LF + +   + PD  T + +LS  A    L
Sbjct: 349 GMSSPSLSSWNTILSGYSQN--ENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLL 406

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             GR +HA S K  +  D+ + + LI MY+KCG ++ A +IF  I++ DIV WN+M++  
Sbjct: 407 EGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGL 466

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEG 583
           +L+ L K A   F++M+ +G  P   S   VL  C   S LS+G
Sbjct: 467 SLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQG 510



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 195/440 (44%), Gaps = 61/440 (13%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ C   +  + G+ IHA  ++S   ++ F+   LI  Y        +  +F  +  +D
Sbjct: 11  LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN------LGVEE 278
           +   N ++  Y KA E E A  +F  +     E N  ++  +IS    N      + VE 
Sbjct: 71  IYTWNAILGAYCKASELEDAHVLFAEMP----ERNIVSWNTLISALTRNGACGALVDVEC 126

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G++ HG+++K G+   I VGNA++ MY K     +A + F  + E N +S+TA++ G   
Sbjct: 127 GRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLAD 186

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL--------------QLH 384
           S    +A   F   L   I  DS  L++V+  CS     E GL              Q+H
Sbjct: 187 SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVH 246

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
              IKHG+ SD+ L  +L+D+YAK G++ SA M+           +N +++G+ +K    
Sbjct: 247 CLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQK--SQ 304

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
               +    + +  G EPD +T+  +L      AC+                        
Sbjct: 305 SSKAIEYLQRMQYHGFEPDEITYVNMLV-----ACI------------------------ 335

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
                 K G I+   Q+F G+S   + SWN +LS Y+ +   K A+ LF EM+     PD
Sbjct: 336 ------KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPD 389

Query: 565 DISILGVLQACIYSGLSEGG 584
             ++  +L +     L EGG
Sbjct: 390 RTTLAIILSSLAGMMLLEGG 409



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            E       +++  C +      GK +H   ++  +  +  + N ++  Y K    + + 
Sbjct: 1   METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID--GCSV 373
           R+FD + +R++ +W A++  Y ++     A   F E  +  I   ++ ++ +     C  
Sbjct: 61  RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGA 120

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             ++E G + HG +IK G  +++ +G AL+ +YAK   +  A              F A+
Sbjct: 121 LVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAM 180

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC-------------- 479
           + G  +  +D   +   LF       +  D V+ S +L + +   C              
Sbjct: 181 MGGLAD--SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSS 238

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
            V G+ +H  +IK G+ +D+ + N+L+ MYAK G++D A  IF  + +  +VSWN M++ 
Sbjct: 239 DVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAG 298

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           Y        A+   + M+  GF PD+I+ + +L ACI SG  E G  +F+
Sbjct: 299 YGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFD 348



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 12/237 (5%)

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           ++ LA+++  C        G  +H   ++     D  L   L++ YAK   + ++R L D
Sbjct: 5   TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS-LSASQAC 479
               +    +NAIL  + +  A + ED  VLF++      E + V+++ L+S L+ + AC
Sbjct: 65  QMPKRDIYTWNAILGAYCK--ASELEDAHVLFAEMP----ERNIVSWNTLISALTRNGAC 118

Query: 480 --LVR---GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
             LV    GR  H  SIK G   ++ VGNAL+ MYAKC  I  A Q F  + + + VS+ 
Sbjct: 119 GALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFT 178

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           AM+   A       A  LF  M R     D +S+  VL  C   G  E G+   N++
Sbjct: 179 AMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDV 235


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 188/659 (28%), Positives = 334/659 (50%), Gaps = 51/659 (7%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D++ G+  H   +K G  N+ +  N L+ +YAK   +  A + F  +   + +++T+++ 
Sbjct: 152 DVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMG 211

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS--------------LLEDRIFG 178
           G  D         +   M R+    +  + S +L  CS              +L   + G
Sbjct: 212 GLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHG 271

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q+H   IK GFE+++ +  SL+ MY  +G    AE +F  +    V   N MI  Y + 
Sbjct: 272 QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQK 331

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            +S  A      +    FEP++ T+ N++  C ++  +E G+Q                 
Sbjct: 332 SQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQ----------------- 374

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
                             MFD +S  +L SW  ++SGY ++ +  +A+  F E     + 
Sbjct: 375 ------------------MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVH 416

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D + LA ++   +    LE G Q+H  + K  + +D+ L + L+ +Y+K G ++ A+ +
Sbjct: 417 PDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRI 476

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D  +      +N++++G      D E      F + R  GM P   +++ +LS  A  +
Sbjct: 477 FDRIAELDIVCWNSMMAGLSLNSLDKE--AFTFFKKMREKGMFPSQFSYATVLSCCAKLS 534

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L +GR +H+   + GY  D  VG+ALI MY+KCG +D A  +F  +  ++ V+WN M+ 
Sbjct: 535 SLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIH 594

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            YA +G G  A+LL+E+M   G  PD I+ + VL AC +SGL + GI +FN ++Q +G+ 
Sbjct: 595 GYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVE 654

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P+++H+ C++D LGRAGRL EA  LI+  P    P++W  L+S  ++ A+   +  A++ 
Sbjct: 655 PLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEE 714

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           L  L+P+++  ++L++N+Y+  G  D+A  VR  M+  ++ K+ G SWIE  + +  F+
Sbjct: 715 LFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFM 773



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/553 (27%), Positives = 258/553 (46%), Gaps = 83/553 (15%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY-- 134
           G+ +HA +L+S   +DTF +N LI  YAK N +D +++LFD M  R   TW +++  Y  
Sbjct: 24  GKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCK 83

Query: 135 ---LDD--------------------------GDYESVLGIACDMYRSEEKFNEHTCSVI 165
              L+D                          G  +  LG+   M R        T + +
Sbjct: 84  ASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASV 143

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L AC  L D   G + H  +IK G +NN++VG +L+ MY    C  +A   F  +   + 
Sbjct: 144 LSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNE 203

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE----NLGVEE--- 278
                M+     + +   AF +F  +L +    +  + ++V+ VC        G+ +   
Sbjct: 204 VSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSND 263

Query: 279 -------GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
                  G+Q+H L +K G   ++ + N+++ MY K+G  + AE +F  + E +++SW  
Sbjct: 264 VLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNV 323

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           +I+GY +     KAI    E+L                           +Q HGF     
Sbjct: 324 MIAGYGQKSQSSKAI----EYLQR-------------------------MQYHGFEPDE- 353

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
            ++ V +  A +    K GD+++ R + DG S    + +N ILSG+ +   ++ ++ + L
Sbjct: 354 -ITYVNMLVACI----KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQN--ENHKEAVKL 406

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           F + +   + PD  T + +LS  A    L  GR +HA S K  +  D+ + + LI MY+K
Sbjct: 407 FREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSK 466

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           CG ++ A +IF  I++ DIV WN+M++  +L+ L K A   F++M+ +G  P   S   V
Sbjct: 467 CGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATV 526

Query: 572 LQACI-YSGLSEG 583
           L  C   S LS+G
Sbjct: 527 LSCCAKLSSLSQG 539



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 196/465 (42%), Gaps = 82/465 (17%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ C   +  + G+ IHA  ++S   ++ F+   LI  Y        +  +F  +  +D
Sbjct: 11  LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70

Query: 225 VRCVNFMILEYNKAGESE-------------------------------MAFHVFVHLLS 253
           +   N ++  Y KA E E                                A  V+  +  
Sbjct: 71  IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSR 130

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
             F P  +T  +V+S C   + VE G++ HG+++K G+   I VGNA++ MY K     +
Sbjct: 131 EGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGD 190

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A + F  + E N +S+TA++ G   S    +A   F   L   I  DS  L++V+  CS 
Sbjct: 191 AIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSR 250

Query: 374 CSNLELGL--------------QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
               E GL              Q+H   IKHG+ SD+ L  +L+D+YAK G++ SA M+ 
Sbjct: 251 GGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIF 310

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                     +N +++G+ +K        +    + +  G EPD +T+  +L      AC
Sbjct: 311 VNMPEVSVVSWNVMIAGYGQK--SQSSKAIEYLQRMQYHGFEPDEITYVNMLV-----AC 363

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           +                              K G I+   Q+F G+S   + SWN +LS 
Sbjct: 364 I------------------------------KSGDIEAGRQMFDGMSSPSLSSWNTILSG 393

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           Y+ +   K A+ LF EM+     PD  ++  +L +     L EGG
Sbjct: 394 YSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGG 438



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 20/357 (5%)

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +  H+L S    + +    +I    +   ++  ++L     K    R+I   NAI+  Y 
Sbjct: 27  IHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPK----RDIYTWNAILGAYC 82

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K    E+A  +F  + ERN++SW  LIS   R+G   KA+  +      G       LA+
Sbjct: 83  KASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLAS 142

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+  C    ++E G + HG +IK G  +++ +G AL+ +YAK   +  A           
Sbjct: 143 VLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPN 202

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC------- 479
              F A++ G  +  +D   +   LF       +  D V+ S +L + +   C       
Sbjct: 203 EVSFTAMMGGLAD--SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHD 260

Query: 480 -------LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
                   V G+ +H  +IK G+ +D+ + N+L+ MYAK G++D A  IF  + +  +VS
Sbjct: 261 SNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVS 320

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           WN M++ Y        A+   + M+  GF PD+I+ + +L ACI SG  E G  +F+
Sbjct: 321 WNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFD 377



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 109/262 (41%), Gaps = 33/262 (12%)

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           ++ LA+++  C        G  +H   ++     D  L   L++ YAK   + ++R L D
Sbjct: 5   TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ------------------------- 455
               +    +NAIL  + +  A + ED  VLF++                          
Sbjct: 65  QMPKRDIYTWNAILGAYCK--ASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKAL 122

Query: 456 ----RLA--GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
               R++  G  P   T + +LS   +   +  GR  H  SIK G   ++ VGNAL+ MY
Sbjct: 123 GVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMY 182

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           AKC  I  A Q F  + + + VS+ AM+   A       A  LF  M R     D +S+ 
Sbjct: 183 AKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLS 242

Query: 570 GVLQACIYSGLSEGGICLFNEI 591
            VL  C   G  E G+   N++
Sbjct: 243 SVLGVCSRGGCGEFGLHDSNDV 264



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 31/147 (21%)

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           ME      + LL     +   + G+ +HA+ +++  + D  + N LI  YAKC +ID + 
Sbjct: 1   METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60

Query: 520 QIFKGISDRDIVSWNAMLSAY-------------------------------ALHGLGKG 548
           ++F  +  RDI +WNA+L AY                                 +G  + 
Sbjct: 61  RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQK 120

Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC 575
           AL ++  M REGF P   ++  VL AC
Sbjct: 121 ALGVYYRMSREGFVPTHFTLASVLSAC 147


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 191/684 (27%), Positives = 353/684 (51%), Gaps = 7/684 (1%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           + +P LVK          G + H  ++  G  +D++ A +LIN Y+KF     A+K+FD 
Sbjct: 49  HTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDT 108

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV-ILEACSLLEDRIF 177
           M  R+ + WT++I  Y   G+++    +A  MY    +      SV +L   S + + + 
Sbjct: 109 MDDRNVVPWTTMIGCYTRAGEHD----VAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVH 164

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
            + +HA  I+ GF ++V +  S++++Y   G   +A+ +F  +  +DV   N ++  Y +
Sbjct: 165 LQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQ 224

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G       + + + +   EP+  TF +++S       +  GK +HG  ++ G+ ++  +
Sbjct: 225 LGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI 284

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             +++ MY K G    A R+F+ +  +++ISWTA+ISG V++     A+  F   L   +
Sbjct: 285 ETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRV 344

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
              ++ +A+V+  C+   +  LG  +HG+ ++     D+    +LV +YAK G L+ +  
Sbjct: 345 MPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCS 404

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D  S +    +NAI+SG  +         ++LF++ R A   PD +T   LL   AS 
Sbjct: 405 VFDRMSRRDIVSWNAIVSGHAQN--GHLCKALLLFNEMRKARQRPDSITVVSLLQACASI 462

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L +G+ +H +  K+     +++  AL+ MY+KCG +  A + F  +  +D+VSW++++
Sbjct: 463 GALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSII 522

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y  HG G+ AL ++ +    G  P+ +  L +L AC ++GL + G+  F+ + + +G+
Sbjct: 523 AGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGI 582

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P LEH AC+VDLL RAGR+ EA +         S  +   L+   +   N +   + ++
Sbjct: 583 EPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAR 642

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            ++ L+P +AG+++ +++ YA     D   +V T M  L L K  G S+IE+   +  F 
Sbjct: 643 EIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFF 702

Query: 718 ASGKDHPESEEIYSKLDLLNDEMK 741
                HP+ EEI   L +L  EM+
Sbjct: 703 TDHSSHPQFEEIMLVLKILGSEMR 726



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 263/516 (50%), Gaps = 7/516 (1%)

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
           ++ ++I      G +  VL     M  ++   + HT   +++AC+ L+    G   H   
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           I  G+ ++ ++ TSLI+ Y   G  + A  VF  +  ++V     MI  Y +AGE ++AF
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            ++  +     +P+  T   ++S   E + ++    LH   +++G   ++++ N+++ +Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALANSMLNVY 191

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G  E+A+ +F+ +  R++ISW +L+SGY + G+  + +   +     GI  D     
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +++   ++ S L +G  +HG  ++ G   D  + T+L+ +Y K G++ SA  + +G   K
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               + A++SG ++   D  +  + +F +   + + P   T + +L+  A       G S
Sbjct: 312 DVISWTAMISGLVQN--DCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTS 369

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +H Y ++     D+   N+L+TMYAKCG ++ +  +F  +S RDIVSWNA++S +A +G 
Sbjct: 370 VHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGH 429

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
              ALLLF EM++    PD I+++ +LQAC   G    G  + N + +   L P +    
Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTK-SCLGPCILIDT 488

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            +VD+  + G L  A    +  P  +  + W ++++
Sbjct: 489 ALVDMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIA 523



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 15/262 (5%)

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
           T  +NAI++      A    DV++ +S        PD  TF  L+    S      G S 
Sbjct: 13  TKSYNAIINRL--STAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSF 70

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H   I  GY++D  +  +LI  Y+K G    A ++F  + DR++V W  M+  Y   G  
Sbjct: 71  HQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEH 130

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE--GGICLFNEIEQIYGLRPILEHF 604
             A  ++  M+R+G  P  +++LG+L     SG+ E     CL   + Q YG    +   
Sbjct: 131 DVAFSMYNIMRRQGIQPSSVTMLGLL-----SGVLELVHLQCLHACVIQ-YGFGSDVALA 184

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK--FSILASKRLLDL 662
             M+++  + GR+ +A  L      +   + W +LVS    + N +    +L   +   +
Sbjct: 185 NSMLNVYCKCGRVEDAQALFELMD-ARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGI 243

Query: 663 EPKDA--GSFILVSNMYAGQGM 682
           EP     GS +  + M +  G+
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGV 265


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 192/612 (31%), Positives = 313/612 (51%), Gaps = 64/612 (10%)

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            F   +++S Y   G   +A  VF  +  +D      +I+ YN+ G  E A  +FV ++ 
Sbjct: 41  TFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVK 100

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P  +T TNV++ C        GK++H   VK G+   + V N+++ MY K G  + 
Sbjct: 101 DKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKM 160

Query: 314 AERMFDA-------------------------------ISERNLISWTALISGYVRSGHG 342
           A+ +FD                                +SER+++SW ++I+G  + G  
Sbjct: 161 AKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFD 220

Query: 343 GKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
            +A+  F   L D  +  D   LA+ +  C+    L  G Q+HG+ ++  + +   +G A
Sbjct: 221 NEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNA 280

Query: 402 LVDIYAKGGDLKSARMLLD--GFSCKYTAEFNAILSGFME------------KIADDE-- 445
           L+ +YAK G ++ AR +++  G S      F A+L+G+++             + D +  
Sbjct: 281 LISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVV 340

Query: 446 ---------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
                           D + +F      G  P+  T + +LS S+S   L  G+ +HA +
Sbjct: 341 AWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASA 400

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHGLGKGA 549
           I++G A    VGNAL TMYAK GSI+GA ++F  +  +RD VSW +M+ A A HGLG+ A
Sbjct: 401 IRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEA 460

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           + LFE+M   G  PD I+ +GVL AC + GL E G   F+ ++ ++ + P L H+ACMVD
Sbjct: 461 IELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVD 520

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           L GRAG L EA   + + P     + W +L+S  K+  N   + +A++RLL +EP ++G+
Sbjct: 521 LFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGA 580

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           +  ++N+Y+  G  D+AAK+R  M    + KE G SW++I +K H F      HP+ +EI
Sbjct: 581 YSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEI 640

Query: 730 YSKLDLLNDEMK 741
           Y  +D +  E+K
Sbjct: 641 YKMMDKIWKEIK 652



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 238/516 (46%), Gaps = 72/516 (13%)

Query: 93  TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
           TF  N +++ YAK  +L+ A ++FD + VR +++WT++I GY   G +E  + I  DM +
Sbjct: 41  TFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVK 100

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
            +    + T + +L +C+    R  G+++H+F +K G    V V  SL++MY  +G  + 
Sbjct: 101 DKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKM 160

Query: 213 AENVFRG-------------------------------LAYKDVRCVNFMILEYNKAGES 241
           A+ VF                                 L+ +D+   N MI   N+ G  
Sbjct: 161 AKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFD 220

Query: 242 EMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
             A   F  +L  +  +P+ ++  + +S C     +  GKQ+HG  V+       +VGNA
Sbjct: 221 NEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNA 280

Query: 301 IVTMYGKHGMSEEAER---------------------------------MFDAISERNLI 327
           +++MY K G  E A R                                 +F+++ + +++
Sbjct: 281 LISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVV 340

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           +WTA+I GYV++G    AI  F   +  G   +S  LA ++   S  ++L  G Q+H  A
Sbjct: 341 AWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASA 400

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF-SCKYTAEFNAILSGFMEKIADDEE 446
           I+ G      +G AL  +YAK G +  AR + +     + T  + +++    +      E
Sbjct: 401 IRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLG--E 458

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--A 504
           + + LF Q    G++PD +T+  +LS       + +GRS     +K  +  D  + +   
Sbjct: 459 EAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDL-MKNVHKIDPTLSHYAC 517

Query: 505 LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
           ++ ++ + G +  A++  + +  + D+++W ++LS+
Sbjct: 518 MVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSS 553



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 144/600 (24%), Positives = 243/600 (40%), Gaps = 146/600 (24%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
            +G   +G+ VH+F++K G       AN+L+N+YAK   L +A+ +FD M +R+  +W +
Sbjct: 119 ATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNA 178

Query: 130 LIKGYLDDG--------------------------------DYESVLGIACDMYRSEEKF 157
           +I  +++ G                                D E++   +  +  +  K 
Sbjct: 179 MISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKP 238

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR------ 211
           +  + +  L AC+ LE   FG+QIH + +++ F+ +  VG +LISMY  SG         
Sbjct: 239 DRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRII 298

Query: 212 ---------------------------EAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
                                       A  +F  L   DV     MI+ Y + G +  A
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             VF  ++S    PN +T   ++S       +  GKQ+H  A++ G     SVGNA+ TM
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM 418

Query: 305 YGKHGMSEEAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           Y K G    A ++F+ + + R+ +SWT++I    + G G +AI  F + L LGI  D   
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHIT 478

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKSARMLLDG 421
              V+  C+    +E G       +K+ +  D  L     +VD++ + G L+ A   ++ 
Sbjct: 479 YVGVLSACTHGGLVEQGRSYFDL-MKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVEN 537

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS--------- 472
                                                 MEPD + +  LLS         
Sbjct: 538 MP------------------------------------MEPDVIAWGSLLSSCKVYKNVD 561

Query: 473 ---LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK-----G 524
              ++A +  L+   +  AYS             AL  +Y+ CG  D A +I K     G
Sbjct: 562 LAKVAAERLLLIEPNNSGAYS-------------ALANVYSSCGKWDDAAKIRKLMKARG 608

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGAL-----------LLFEEMKREGFAPDDISILGVLQ 573
           +     +SW  + +   + G+  G              +++E+K+ GFAPD  S+L  L+
Sbjct: 609 VKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLE 668



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 185/449 (41%), Gaps = 97/449 (21%)

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK-- 344
           VK G+   + + N ++ +Y K G   +A  +F+ +  +   SW  ++SGY + G   K  
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 345 -----------------------------AINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
                                        AI  F++ +   +      L  V+  C+   
Sbjct: 62  QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +  +G ++H F +K G  + V +  +L+++YAK GDLK A+++ D    + T+ +NA++S
Sbjct: 122 SRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMIS 181

Query: 436 GFM------------EKIAD------------------DEEDVMVLFSQQRLAGMEPDPV 465
             M            E +++                  D E +    S  +   ++PD  
Sbjct: 182 LHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRF 241

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID--------- 516
           + +  LS  A+   L  G+ +H Y ++T + A   VGNALI+MYAK G ++         
Sbjct: 242 SLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQS 301

Query: 517 ------------------------GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
                                    A QIF  + D D+V+W AM+  Y  +GL   A+ +
Sbjct: 302 GISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEV 361

Query: 553 FEEMKREGFAPDDISILGVLQA-CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           F+ M  EG  P+  ++  +L A    + L+ G     + I     L P + +   +  + 
Sbjct: 362 FKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMY 419

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            +AG ++ A  + N    +   + W +++
Sbjct: 420 AKAGSINGARKVFNLLRQNRDTVSWTSMI 448



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 7/275 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           L+ +   SG +++ + +   + +SG S  D      L+N Y K   +  A+++F+ +   
Sbjct: 281 LISMYAKSGGVEIARRI---IEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDP 337

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
             + WT++I GY+ +G     + +   M     + N  T + +L A S +     G+QIH
Sbjct: 338 DVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIH 397

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGES 241
           A AI+SG   +  VG +L +MY  +G    A  VF  L   +D      MI+   + G  
Sbjct: 398 ASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLG 457

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNA 300
           E A  +F  +L+   +P+  T+  V+S C     VE+G+    L      +   +S    
Sbjct: 458 EEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYAC 517

Query: 301 IVTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
           +V ++G+ G+ +EA +  + +  E ++I+W +L+S
Sbjct: 518 MVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLS 552


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 209/683 (30%), Positives = 354/683 (51%), Gaps = 14/683 (2%)

Query: 64  LVKISIGSG---DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  +++ SG   ++   + +H F +K G   D    N+LI +Y    R+  A K+F  M 
Sbjct: 301 ITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME 360

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            + A++WT++I GY  +G  +  L +   M       ++ T +  L AC+ L     G +
Sbjct: 361 TKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIK 420

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H  A   GF   V V  +L+ MY  S    +A  VF+ +A KDV   + MI  +     
Sbjct: 421 LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHR 480

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           S  A + F ++L    +PN  TF   +S C     +  GK++H   ++ G+  E  V NA
Sbjct: 481 SFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA 539

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEFLDLGIC 358
           ++ +Y K G +  A   F   SE++++SW  ++SG+V  G G  A++ F  + +  LG  
Sbjct: 540 LLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLG-- 597

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
                  + +  C+    L++G++LH  A   G++  V +  AL+++YAK   +  A  +
Sbjct: 598 --RMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEV 655

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               + K    ++++++GF         D +  F +  L  ++P+ VTF   LS  A+  
Sbjct: 656 FKFMAEKDVVSWSSMIAGFC--FNHRSFDALYYF-RYMLGHVKPNSVTFIAALSACAATG 712

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L  G+ +HAY ++ G  ++  V NAL+ +Y KCG    A+  F   S++D+VSWN MLS
Sbjct: 713 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 772

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            +  HGLG  AL LF +M   G  PD+++ + ++ AC  +G+   G  LF+   + + + 
Sbjct: 773 GFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIV 831

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P L+H+ACMVDLL R G+L+EA NLIN  P      +W  L++  ++  + +   LA+K 
Sbjct: 832 PNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKV 891

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           +L+LEP D    +L+ ++Y   G   + A+VR TM +  L ++ GCSW+E+    H F+ 
Sbjct: 892 ILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLT 951

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
             + HP+ +EI   L  + + MK
Sbjct: 952 DDESHPQIKEINVVLHGIYERMK 974



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 234/460 (50%), Gaps = 3/460 (0%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N ++++  +F  +  A ++F  M  R   +W  ++ GY   G  E  L +   M  +  +
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            + +T   +L  C  + D   G ++HA  ++ GF + V V  +L++MY   G    A  V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F G+A  D    N MI  + +  E E    +F+ +L ++ +PN  T T+V         V
Sbjct: 255 FDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
              K++HG AVK G   +++  N+++ MY   G   +A ++F  +  ++ +SWTA+ISGY
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            ++G   KA+  +       +  D   +A+ +  C+    L++G++LH  A   G++  V
Sbjct: 375 EKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  AL+++YAK   +  A  +    + K    ++++++GF         D +  F +  
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFC--FNHRSFDALYYF-RYM 491

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           L  ++P+ VTF   LS  A+   L  G+ +HAY ++ G  ++  V NAL+ +Y KCG   
Sbjct: 492 LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            A+  F   S++D+VSWN MLS +  HGLG  AL LF +M
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 263/529 (49%), Gaps = 18/529 (3%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++   G  D ++G+ VHA +L+ G  ++    N L+ +YAK   +  A+K+FDGM +
Sbjct: 201 PCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAM 260

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              I+W ++I G+ ++ + E+ L +   M  +E + N  T + +  A  +L +  F +++
Sbjct: 261 TDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEM 320

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H FA+K GF  +V    SLI MY   G   +A  +F  +  KD      MI  Y K G  
Sbjct: 321 HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  V+  +   +  P+D T  + ++ C     ++ G +LH LA   G +R + V NA+
Sbjct: 381 DKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANAL 440

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K    ++A  +F  ++E++++SW+++I+G+  +     A+  F   L   +  +S
Sbjct: 441 LEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG-HVKPNS 499

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                 +  C+    L  G ++H + ++ G  S+  +  AL+D+Y K G    A      
Sbjct: 500 VTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSV 559

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDV-MVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            S K    +N +LSGF   +A    D+ + LF+Q           +  R+ + SA  AC 
Sbjct: 560 HSEKDVVSWNIMLSGF---VAHGLGDIALSLFNQMMY-------TSLGRMGACSALAACA 609

Query: 481 VRGR-----SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
             GR      LH  +   G+   V+V NAL+ MYAK   ID A ++FK ++++D+VSW++
Sbjct: 610 CLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSS 669

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           M++ +  +     AL  F  M      P+ ++ +  L AC  +G    G
Sbjct: 670 MIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSG 717



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 190/389 (48%), Gaps = 3/389 (0%)

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +G +++SM    G    A  VF  +  +DV   N M+  Y K G  E A  ++  +L + 
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P+ YTF  V+  C        G+++H   ++FG   E+ V NA+VTMY K G    A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++FD ++  + ISW A+I+G+  +      +  FL  L+  +  +   + +V     + S
Sbjct: 253 KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            +    ++HGFA+K G+  DV    +L+ +Y   G +  A  +      K    + A++S
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+ +    D+   + +++   L  + PD VT +  L+  A    L  G  LH  +   G+
Sbjct: 373 GYEKNGFPDK--ALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
              V+V NAL+ MYAK   ID A ++FK ++++D+VSW++M++ +  +     AL  F  
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRY 490

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGG 584
           M      P+ ++ +  L AC  +G    G
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSG 518



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 171/347 (49%), Gaps = 3/347 (0%)

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L SS   P++  +  +  +C     V+ G +    A        + +GNA+++M  + G 
Sbjct: 87  LESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGE 146

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A R+F  + ER++ SW  ++ GY + G   +A++ +   L  G+  D      V+  
Sbjct: 147 IWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRT 206

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C    +  +G ++H   ++ G+  +V +  ALV +YAK GD+ +AR + DG +      +
Sbjct: 207 CGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISW 266

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NA+++G  E    + E  + LF       ++P+ +T + +   S   + +   + +H ++
Sbjct: 267 NAMIAGHFEN--HECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFA 324

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +K G+A DV   N+LI MY   G +  A +IF  +  +D +SW AM+S Y  +G    AL
Sbjct: 325 VKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKAL 384

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            ++  M+     PDD++I   L AC   G  + GI L +E+ Q  G 
Sbjct: 385 EVYALMELHNVNPDDVTIASALAACACLGRLDVGIKL-HELAQNKGF 430


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 209/678 (30%), Positives = 353/678 (52%), Gaps = 19/678 (2%)

Query: 61   WPQLVKISIGSGD-LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
            +P +++   GS + L +G+ VH  ++KSG  +D     +L+ +Y +   L  A+K+FDGM
Sbjct: 661  FPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM 720

Query: 120  LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             VR  + W++L+   L++ +    L +   M     + +  T   ++E C+ L       
Sbjct: 721  PVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 780

Query: 180  QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
             +H    +  F+ +  +  SL++MY   G    +E +F  +A K+      MI  YN+  
Sbjct: 781  SVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGE 840

Query: 240  ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI---- 295
             SE A   F  +L S  EPN  T  +++S C  N  + EGK +HG A++    RE+    
Sbjct: 841  FSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIR----RELDPNY 896

Query: 296  -SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
             S+  A+V +Y + G   + E +   + +RN++ W + IS Y   G   +A+  F + + 
Sbjct: 897  ESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVT 956

Query: 355  LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
              I  DS  LA++I  C     + LG Q+HG  I+   +SD  +  +++D+Y+K G +  
Sbjct: 957  WRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTD-VSDEFVQNSVIDMYSKSGFVNL 1015

Query: 415  ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            A  + D    +    +N++L GF +    +  + + LF     + +E + VTF  ++   
Sbjct: 1016 ACTVFDQIKHRSIVTWNSMLCGFSQN--GNSLEAINLFDYMYHSCLEINKVTFLAVIQAC 1073

Query: 475  ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
            +S   L +GR +H   I  G   D+    ALI MYAKCG ++ A  +F+ +S+R IVSW+
Sbjct: 1074 SSIGSLEKGRWVHHKLIVCG-IKDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWS 1132

Query: 535  AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
            +M++AY +HG    A+  F +M   G  P+++  + VL AC +SG  E G   FN + ++
Sbjct: 1133 SMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN-LMKL 1191

Query: 595  YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
            +G+ P  EHFAC +DLL R+G L EA   I   PF     +W +LV+  ++  + K  I+
Sbjct: 1192 FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRI--HQKMDII 1249

Query: 655  ASKR--LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
             + +  + D+   D G + L+SN+YA +G  +E  ++R+ M  L L K  G S IEID K
Sbjct: 1250 KAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVPGYSAIEIDKK 1309

Query: 713  LHHFVASGKDHPESEEIY 730
            +  F A  +   ++EEIY
Sbjct: 1310 VFRFGAGEETCFQTEEIY 1327


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 204/634 (32%), Positives = 331/634 (52%), Gaps = 9/634 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA+L+  G   D   +  L++LY  F RLD+A+ +FD +     ++W  +I+ Y  + +
Sbjct: 24  MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE 83

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF--GEQIHAFAIKSGFENNVFVG 197
           +  ++G    M    ++ +    S +L+ACS  E R F  G ++H   +K G  ++ FV 
Sbjct: 84  FRDIVGFYNRMRVCLKECDNVVFSHVLKACS--ESRNFDEGRKVHCQIVKFGNPDS-FVF 140

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           T L+ MY   G    + +VF     ++V   + MI  Y +   ++    +F  +     E
Sbjct: 141 TGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIE 200

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
            N  T   ++  C +   + +GK LHG  +K G+     +  A++ +Y K G+  +A  +
Sbjct: 201 ANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSV 260

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD +   +++SWTA+I GY ++G   +A+  FL+   + +  +   +A+V   CS   NL
Sbjct: 261 FDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNL 320

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
            LG  +HG +IK G   D  +  +LVD YAK    + AR + +  S +    +N+I+S F
Sbjct: 321 NLGRSIHGLSIKLGS-RDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAF 379

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-A 496
            +  +  E   + LF Q R+  + PD VT   +LS  AS   L  G S HAY++K G  +
Sbjct: 380 SQNGSAYE--ALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLS 437

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           ++V VG AL+T YAKCG  + A  IF G+  +  V+W+AM+S Y + G G+G+L +F +M
Sbjct: 438 SNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDM 497

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
            +    P++     +L AC ++G+   G  LF  I Q Y L P  +H+ CMVDLL RAGR
Sbjct: 498 LKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGR 557

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L EA++ I   P      L+   +    L +      LA KR+L+L P DA  ++L+ N+
Sbjct: 558 LKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNL 617

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
           YA      +  +VR  M    L K  GCS +E+D
Sbjct: 618 YASDARWSKVKQVRELMKQRGLMKTPGCSLMEMD 651



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 198/396 (50%), Gaps = 4/396 (1%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           ++HA+ +  G   ++   T L+S+Y   G    A  VF  + + D      +I  Y    
Sbjct: 23  EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNS 82

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           E       +  +     E ++  F++V+  C E+   +EG+++H   VKFG      V  
Sbjct: 83  EFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDSF-VFT 141

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            +V MY K G  E +  +FD   +RN+ SW+++I+GYV++      +  F    +  I  
Sbjct: 142 GLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEA 201

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   L  ++  C     L  G  LHG+ IK G      L TAL+D+YAK G ++ AR + 
Sbjct: 202 NQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVF 261

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D         + A++ G+ +      E+ + LF Q+    + P+ VT + + S  +    
Sbjct: 262 DELHGIDIVSWTAMIVGYTQNGC--PEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLN 319

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  GRS+H  SIK G + D IV N+L+  YAKC     A  +F+ ISDRD+V+WN+++SA
Sbjct: 320 LNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISA 378

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           ++ +G    AL LF +M+     PD ++++ VL AC
Sbjct: 379 FSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSAC 414



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 172/346 (49%), Gaps = 3/346 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L  G+ +H +L+K G +  ++    L++LYAK   +  A+ +FD +     ++WT++I
Sbjct: 217 GALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMI 276

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G  E  L +     +     N+ T + +  +CS L +   G  IH  +IK G  
Sbjct: 277 VGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSR 336

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           + + V  SL+  Y      R+A  VF  ++ +DV   N +I  +++ G +  A  +F  +
Sbjct: 337 DPI-VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQM 395

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMYGKHGM 310
                 P+  T  +V+S C     ++ G   H  AVK G++   + VG A++T Y K G 
Sbjct: 396 RMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGD 455

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
           +E A  +FD + +++ ++W+A+ISGY   G+G  +++ F + L   +  +     +++  
Sbjct: 456 AESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSA 515

Query: 371 CSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSA 415
           CS    +  G +L     + +  +   +  T +VD+ A+ G LK A
Sbjct: 516 CSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEA 561



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 3/204 (1%)

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S+C N+   +++H + +  G   D+   T LV +Y   G L  AR++ D         + 
Sbjct: 13  SLCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWK 72

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
            I+  +   +  +  D++  +++ R+   E D V FS +L   +       GR +H   +
Sbjct: 73  VIIRWYF--LNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIV 130

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G   D  V   L+ MYAKCG I+ +  +F    DR++ SW++M++ Y  + L +  L+
Sbjct: 131 KFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLV 189

Query: 552 LFEEMKREGFAPDDISILGVLQAC 575
           LF  M+ E    + I++  ++ AC
Sbjct: 190 LFNRMREELIEANQITLGILVHAC 213


>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 729

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 197/625 (31%), Positives = 316/625 (50%), Gaps = 11/625 (1%)

Query: 85  LKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL 144
           LK G         +LI+LY K      A+ +FD M  R  ++W  LI GY  +G     +
Sbjct: 83  LKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAI 142

Query: 145 GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
            +  DM R   K N+ T   +L +C   E    G  IH F IK+GF  +  +  +L+SMY
Sbjct: 143 QLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMY 202

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
                   ++ +F  +  K V   N MI  Y + G  + A   F  +L   F P+  T  
Sbjct: 203 AKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIM 262

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           N++S    N   E    +H   VK G   + SV  ++V +Y K G +  A++++     +
Sbjct: 263 NLVSA---NAFPE---NVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTK 316

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           +LI+ TA+IS Y   G    A+  F++ + L I  D+  L  V+ G +  S+  +G   H
Sbjct: 317 DLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFH 376

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
           G+ +K G  +D  +   L+ +Y++  ++++A  L      K    +N+++SG ++  A  
Sbjct: 377 GYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQ--AGK 434

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
             D M LFS+  + G +PD +T + LLS       L  G +LH+Y ++     +  +G A
Sbjct: 435 SSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTA 494

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           LI MY+KCG +D A ++F  I D  + +WNA++S Y+L+GL   A   + +++ +G  PD
Sbjct: 495 LIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPD 554

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
            I+ LGVL AC + GL   G+  FN + + YGL P L+H+AC+V LLG+ G   EA+  I
Sbjct: 555 KITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFI 614

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
           N         +W  L++   +    K     +K+L  L  K+ G ++L+SN+YA  G  D
Sbjct: 615 NKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWD 674

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEI 709
           + A+VR  M D   S   GCS + +
Sbjct: 675 DVARVREMMKD---SGGDGCSGVSV 696



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 217/447 (48%), Gaps = 17/447 (3%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
             QI    +K G    + V TSLI +Y   G    A N+F  ++Y+DV   N +I  Y++
Sbjct: 75  ARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQ 134

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G    A  +FV +L  +F+PN  T  +++  C     + +G+ +HG  +K G   +  +
Sbjct: 135 NGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHL 194

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA+++MY K    E ++ +FD + E++++SW  +I  Y ++G   KAI  F E L  G 
Sbjct: 195 NNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGF 254

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
              S  +  ++   +   N      +H + +K G+ +D  + T+LV +YAK G   +A+ 
Sbjct: 255 HPSSVTIMNLVSANAFPEN------VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQ 308

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L   +  K      AI+S + EK   D E  +  F Q     ++PD V    +L    + 
Sbjct: 309 LYKYYPTKDLITLTAIISSYSEK--GDIESAVECFIQTIQLDIKPDAVALIGVLHGITNP 366

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           +    G + H Y +K+G + D +V N LI++Y++   I+ A  +F  + ++ +++WN+M+
Sbjct: 367 SHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMI 426

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           S     G    A+ LF EM   G  PD I+I  +L  C   G    G     E    Y L
Sbjct: 427 SGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIG-----ETLHSYIL 481

Query: 598 RP--ILEHF--ACMVDLLGRAGRLSEA 620
           R    +E F    ++D+  + GRL  A
Sbjct: 482 RNNVRVEDFIGTALIDMYSKCGRLDYA 508



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 204/396 (51%), Gaps = 8/396 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+++H F +K+G   D+   N L+++YAK + L+ +Q LFD M  +S ++W ++I  Y  
Sbjct: 176 GRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQ 235

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G ++  +    +M +  E F+  + +++    +L+    F E +H + +K GF N+  V
Sbjct: 236 NGLFDKAILYFKEMLK--EGFHPSSVTIM----NLVSANAFPENVHCYVVKCGFTNDASV 289

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
            TSL+ +Y   G    A+ +++    KD+  +  +I  Y++ G+ E A   F+  +  D 
Sbjct: 290 VTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDI 349

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +P+      V+           G   HG  VK G+  +  V N ++++Y +    E A  
Sbjct: 350 KPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALS 409

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  + E+ LI+W ++ISG V++G    A+  F E    G   D+  +A+++ GC    N
Sbjct: 410 LFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGN 469

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L +G  LH + +++    +  +GTAL+D+Y+K G L  A  +         A +NAI+SG
Sbjct: 470 LRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISG 529

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           +   +   E      +S+ +  G++PD +TF  +L+
Sbjct: 530 Y--SLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLA 563



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 234/505 (46%), Gaps = 72/505 (14%)

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISV---------CYENLGVEEGKQLHGLAVKFGVVRE 294
           A  +F  +L ++  PN++TF+ +I           C     ++  +Q+    +K GV + 
Sbjct: 32  ALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQ-ARQIQTQCLKRGVNQF 90

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
           I V  +++ +Y K G +  A  MFD +S R+++SW  LI GY ++G+   AI  F++ L 
Sbjct: 91  IHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLR 150

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
                + + + +++  C     +  G  +HGF IK G+  D  L  AL+ +YAK  DL++
Sbjct: 151 ENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEA 210

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           +++L D    K    +N ++  + +    D+   ++ F +    G  P  VT   L+S +
Sbjct: 211 SQLLFDEMDEKSVVSWNTMIGVYGQNGLFDK--AILYFKEMLKEGFHPSSVTIMNLVSAN 268

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           A         ++H Y +K G+  D  V  +L+ +YAK G  + A Q++K    +D+++  
Sbjct: 269 AFP------ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLT 322

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ----------ACIYSG----- 579
           A++S+Y+  G  + A+  F +  +    PD ++++GVL            C + G     
Sbjct: 323 AIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKS 382

Query: 580 -------LSEGGICLFNEIEQI-------YGLR--PILEHFACMVDLLGRAGRLSEAMNL 623
                  ++ G I L++  ++I       Y +R  P++  +  M+    +AG+ S+AM L
Sbjct: 383 GLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLIT-WNSMISGCVQAGKSSDAMEL 441

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN-------- 675
                FSE  +  +   +++     S    L + R+     +   S+IL +N        
Sbjct: 442 -----FSEMSMCGKKPDAITIASLLSGCCQLGNLRI----GETLHSYILRNNVRVEDFIG 492

Query: 676 -----MYAGQGMLDEAAKVRTTMND 695
                MY+  G LD A KV   + D
Sbjct: 493 TALIDMYSKCGRLDYAEKVFYNIKD 517



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 10/298 (3%)

Query: 47  SSVSCSERTLLFNDWPQLVKISIG-------SGDLKLGQAVHAFLLKSGSQNDTFEANNL 99
           S+V C  +T+  +  P  V + IG            +G   H + +KSG  ND   AN L
Sbjct: 336 SAVECFIQTIQLDIKPDAVAL-IGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGL 394

Query: 100 INLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
           I+LY++F+ ++ A  LF  M  +  ITW S+I G +  G     + +  +M    +K + 
Sbjct: 395 ISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDA 454

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
            T + +L  C  L +   GE +H++ +++      F+GT+LI MY   G    AE VF  
Sbjct: 455 ITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYN 514

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +    +   N +I  Y+  G    AF  +  L     +P+  TF  V++ C     V  G
Sbjct: 515 IKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLG 574

Query: 280 KQLHGLAVK-FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
            +   +  K +G++  +     IV + GK G+ +EA    + +  + +   W AL++ 
Sbjct: 575 LEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNA 632


>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
 gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
          Length = 691

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 194/602 (32%), Positives = 310/602 (51%), Gaps = 17/602 (2%)

Query: 49  VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           V C+E  L     P ++K +    D++ G  VHA  + +    D F  N L+ +Y  F  
Sbjct: 99  VPCNEYAL-----PIVLKCA---PDVRFGAQVHALAVATRLIQDVFVTNALVAMYGGFGM 150

Query: 109 LDVAQKLFDGML-VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE 167
           +D A+++FD     R+A++W  +I  Y+ +      +G+  +M  S E+ NE   S ++ 
Sbjct: 151 VDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVN 210

Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
           AC+   D   G Q+H   +++G++ +VF   +L+ MY   G    A  VF  +   DV  
Sbjct: 211 ACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVS 270

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
            N +I      G    A  + + +      PN +T ++V+  C        G+Q+HG  +
Sbjct: 271 WNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMI 330

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
           K     +  V   +V MY K G  ++A ++FD +  R+LI W ALISG    G  G+ ++
Sbjct: 331 KADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLS 390

Query: 348 GF----LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
            F     E LDL +  + + LA V+   +    +    Q+H  A K G LSD  +   L+
Sbjct: 391 LFHRMRKEGLDLDV--NRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLI 448

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D Y K G L  A  + +           ++++   +   D  ED + LF Q    G+EPD
Sbjct: 449 DSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQ--CDHGEDAIKLFVQMLRKGLEPD 506

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
               S LL+  AS +   +G+ +HA+ IK  + +DV  GNAL+  YAKCGSI+ A   F 
Sbjct: 507 SFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFS 566

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
           G+ ++ +VSW+AM+   A HG GK AL LF  M  EG AP++I++  VL AC ++GL + 
Sbjct: 567 GLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDD 626

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
               F  +++ +G+    EH+ACM+D+LGRAG+L +AM L+N+ PF  +  +W  L+  S
Sbjct: 627 AKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALLGAS 686

Query: 644 KL 645
           +L
Sbjct: 687 RL 688



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/508 (31%), Positives = 259/508 (50%), Gaps = 10/508 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  L  G  +H+ LLKSG       +N+L++ Y++      A+ +FD +     ++W+SL
Sbjct: 17  SRSLLAGAHLHSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSL 74

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           +  Y ++G     L     M       NE+   ++L+ C+   D  FG Q+HA A+ +  
Sbjct: 75  VTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLK-CA--PDVRFGAQVHALAVATRL 131

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVF-RGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             +VFV  +L++MY   G   EA+ +F      ++    N MI  Y K      A  VF 
Sbjct: 132 IQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFR 191

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            ++ S   PN++ F+ V++ C  +   E G+Q+HG+ V+ G  +++   NA+V MY K G
Sbjct: 192 EMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLG 251

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E A  +F+ I   +++SW ALI+G V  GH  +A+   L+   LG+  +   L++V+ 
Sbjct: 252 DIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLK 311

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+      LG Q+HGF IK    SD  +   LVD+YAK G L  AR + D    +    
Sbjct: 312 ACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLIL 371

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD--PVTFSRLLSLSASQACLVRGRSLH 487
           +NA++SG        E  V+ LF + R  G++ D    T + +L  +AS   +   + +H
Sbjct: 372 WNALISGCSHDGRHGE--VLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVH 429

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           A + K G  +D  V N LI  Y KCG +D A ++F+     DI+S  +M++A +    G+
Sbjct: 430 ALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGE 489

Query: 548 GALLLFEEMKREGFAPDDISILGVLQAC 575
            A+ LF +M R+G  PD   +  +L AC
Sbjct: 490 DAIKLFVQMLRKGLEPDSFVLSSLLNAC 517



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 228/485 (47%), Gaps = 8/485 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +V    GS D + G+ VH  ++++G   D F AN L+++Y+K   +++A  +F+ +    
Sbjct: 208 VVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAAD 267

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W +LI G +  G     L +   M       N  T S +L+AC+       G QIH 
Sbjct: 268 VVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHG 327

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           F IK+  +++ FV   L+ MY   G   +A  VF  +  +D+   N +I   +  G    
Sbjct: 328 FMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGE 387

Query: 244 AFHVFVHLLSS--DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
              +F  +     D + N  T   V+        +   KQ+H LA K G++ +  V N +
Sbjct: 388 VLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGL 447

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           +  Y K G  + A ++F+     ++IS T++++   +  HG  AI  F++ L  G+  DS
Sbjct: 448 IDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDS 507

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             L+++++ C+  S  E G Q+H   IK  + SDV  G ALV  YAK G ++ A M   G
Sbjct: 508 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSG 567

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    ++A++ G  +      +  + LF +    G+ P+ +T + +LS + + A LV
Sbjct: 568 LPEKGVVSWSAMIGGLAQH--GHGKRALELFHRMLDEGVAPNNITLTSVLS-ACNHAGLV 624

Query: 482 RGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
                +  S+K  +  D    +   +I +  + G +  A ++   +    +   W A+L 
Sbjct: 625 DDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALLG 684

Query: 539 AYALH 543
           A  L+
Sbjct: 685 ASRLN 689



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 174/370 (47%), Gaps = 22/370 (5%)

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G  LH   +K G++   S  N +++ Y +  +   A  +FD I +   +SW++L++ Y  
Sbjct: 23  GAHLHSHLLKSGLLASYS--NHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G    A+  F      G+ C+   L  V+       ++  G Q+H  A+    + DV +
Sbjct: 81  NGMPRDALWAFRSMRGRGVPCNEYALPIVL---KCAPDVRFGAQVHALAVATRLIQDVFV 137

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTA-EFNAILSGFMEKIADDEEDVMVLFSQQRL 457
             ALV +Y   G +  A+ + D    +  A  +N ++S +++   D   D + +F +   
Sbjct: 138 TNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKN--DRCRDAVGVFREMVW 195

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G  P+   FS +++          GR +H   ++TGY  DV   NAL+ MY+K G I+ 
Sbjct: 196 SGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEM 255

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F+ I   D+VSWNA+++    HG    AL L  +MK  G  P+  ++  VL+AC  
Sbjct: 256 AAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAG 315

Query: 578 SGLSEGGICLFNEIEQIYGLR----PILEHFAC--MVDLLGRAGRLSEAMNLINSSPFSE 631
           +G        FN   QI+G         + F    +VD+  + G L +A  + +  P   
Sbjct: 316 AG-------AFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMP-RR 367

Query: 632 SPLLWRTLVS 641
             +LW  L+S
Sbjct: 368 DLILWNALIS 377



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           P T    L+   +   L+ G  LH++ +K+G  A     N L++ Y++C     A  +F 
Sbjct: 4   PGTIGSALARFGASRSLLAGAHLHSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVFD 61

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            I D   VSW+++++AY+ +G+ + AL  F  M+  G   ++ ++  VL+
Sbjct: 62  EIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLK 111


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 172/474 (36%), Positives = 265/474 (55%), Gaps = 3/474 (0%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           PN +TF++++S     + V  G+QLH L  K G    I VG A+V MY K      A R+
Sbjct: 8   PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 67

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSN 376
           FD + ERNL+SW ++I G+  +    +A+  F + L +  +  +   +++V+  C+    
Sbjct: 68  FDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGG 127

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G Q+HG  +K G +    +  +L+D+Y K         L      +    +N ++ G
Sbjct: 128 LNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMG 187

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F++   D  E+    F   R  G+ PD  +FS +L  SAS A L +G ++H   IK GY 
Sbjct: 188 FVQN--DKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYV 245

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            ++ +  +LITMYAKCGS+  A+Q+F+GI D +++SW AM+SAY LHG     + LFE M
Sbjct: 246 KNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHM 305

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
             EG  P  ++ + VL AC ++G  E G+  FN +++I+ + P  EH+ACMVDLLGRAG 
Sbjct: 306 LSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGW 365

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L EA   I S P   +P +W  L+   +   N K    A++RL ++EP + G+++L++NM
Sbjct: 366 LDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANM 425

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
               G L+EA +VR  M    + KE GCSWI++ +    F A  + H  S+EIY
Sbjct: 426 CTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIY 479



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 199/422 (47%), Gaps = 17/422 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           GQ +H+ + K G   + F    L+++YAK   +  A ++FD M  R+ ++W S+I G+  
Sbjct: 29  GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFH 88

Query: 137 DGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           +  Y+  +G+  D+ R +    NE + S +L AC+ +    FG Q+H   +K G     +
Sbjct: 89  NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTY 148

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  SL+ MYF    F E   +F+ +  +DV   N +++ + +  + E A + F  +    
Sbjct: 149 VMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG 208

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             P++ +F+ V+        + +G  +H   +K G V+ + +  +++TMY K G   +A 
Sbjct: 209 ILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAY 268

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++F+ I + N+ISWTA+IS Y   G   + I  F   L  GI         V+  CS   
Sbjct: 269 QVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTG 328

Query: 376 NLELGLQLHGFAIKHGYLSDVRLG----TALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
            +E GL  H  ++K   + D+  G      +VD+  + G L  A+  ++    K T    
Sbjct: 329 RVEEGLA-HFNSMKK--IHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVW 385

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEP-DPVTFSRLLSLSASQACLVRGRSLHAYS 490
             L G   K  + +   M   + +RL  MEP +P  +  L ++     C   GR   A  
Sbjct: 386 GALLGACRKYGNLK---MGREAAERLFEMEPYNPGNYVLLANM-----CTRSGRLEEANE 437

Query: 491 IK 492
           ++
Sbjct: 438 VR 439



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 220/458 (48%), Gaps = 22/458 (4%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           N+ T S IL A +     + G+Q+H+   K GF+ N+FVGT+L+ MY        A  VF
Sbjct: 9   NQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVF 68

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGV 276
             +  +++   N MI+ +      + A  VF  +L      PN+ + ++V+S C    G+
Sbjct: 69  DQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGL 128

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
             G+Q+HG+ VKFG+V    V N+++ MY K    +E  ++F  + +R++++W  L+ G+
Sbjct: 129 NFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGF 188

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           V++    +A N F      GI  D +  +TV+   +  + L  G  +H   IK GY+ ++
Sbjct: 189 VQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNM 248

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  +L+ +YAK G L  A  + +G        + A++S +  ++      V+ LF    
Sbjct: 249 CILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAY--QLHGCANQVIELFEHML 306

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN----ALITMYAKC 512
             G+EP  VTF  +LS  +    +  G + H  S+K  +  D+  G      ++ +  + 
Sbjct: 307 SEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKKIH--DMNPGPEHYACMVDLLGRA 363

Query: 513 GSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGKGALLLFEEMKREGFAPDDISI 568
           G +D A +  + +  +   S W A+L A   +G   +G+ A     EM  E + P +  +
Sbjct: 364 GWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM--EPYNPGNYVL 421

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
           L     C  SG  E      NE+ ++ G+  + +   C
Sbjct: 422 LA--NMCTRSGRLEEA----NEVRRLMGVNGVRKEPGC 453



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 125/277 (45%), Gaps = 14/277 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L  G+ VH  ++K G    T+  N+L+++Y K    D   KLF  +  R  +TW  L+
Sbjct: 126 GGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLV 185

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G++ +  +E        M R     +E + S +L + + L     G  IH   IK G+ 
Sbjct: 186 MGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYV 245

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            N+ +  SLI+MY   G   +A  VF G+   +V     MI  Y   G +     +F H+
Sbjct: 246 KNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHM 305

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN-------AIVTM 304
           LS   EP+  TF  V+S C     VEEG         F  +++I   N        +V +
Sbjct: 306 LSEGIEPSHVTFVCVLSACSHTGRVEEG------LAHFNSMKKIHDMNPGPEHYACMVDL 359

Query: 305 YGKHGMSEEAERMFDAISERNLIS-WTALISGYVRSG 340
            G+ G  +EA+R  +++  +   S W AL+    + G
Sbjct: 360 LGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYG 396



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 11/200 (5%)

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           R +G  P+  TFS +LS SA+   ++ G+ LH+   K G+ A++ VG AL+ MYAKC  +
Sbjct: 2   RCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADM 61

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE-GFAPDDISILGVLQA 574
             A ++F  + +R++VSWN+M+  +  + L   A+ +F+++ RE    P+++S+  VL A
Sbjct: 62  HSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSA 121

Query: 575 CIYSGLSEGGICLFNEIEQI---YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
           C     + GG+    ++  +   +GL P+      ++D+  +     E + L        
Sbjct: 122 CA----NMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVG-DR 176

Query: 632 SPLLWRTLVSVSKLMANSKF 651
             + W  L  V   + N KF
Sbjct: 177 DVVTWNVL--VMGFVQNDKF 194


>gi|242066372|ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
 gi|241934306|gb|EES07451.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
          Length = 706

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 217/678 (32%), Positives = 339/678 (50%), Gaps = 44/678 (6%)

Query: 76  LGQAVHAFLLKSGS----QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           L  A+HA LLKSG+    Q      N+L++ Y +   L  A +L DG   R A T+ SLI
Sbjct: 44  LTSALHAALLKSGALRSPQAPLAATNSLLHAYLQCGLLSRALRLLDGTPRRDAATYASLI 103

Query: 132 KGYLDDGDYESVLGIACDMYR-----SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
             +   G     L    DM       +  + NE T + +L+AC L  D   G  +H + +
Sbjct: 104 SAHCRLGAPLDALRAFLDMLDWGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYLV 163

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
             GF  + FV  SL++MY  +G    A  +  GL  +DV     +I      G  E    
Sbjct: 164 AGGFCGDPFVVGSLVNMYAKAGDVVSARRLVLGLPCRDVVSWTAIISGCVLNGMLEEGLE 223

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           VFV +L     PN+ T  +VI  C      E    +H L V   +  + SV N+++ MY 
Sbjct: 224 VFVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALVVLLELEHDASVVNSLIMMYA 283

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K+G  EEA  +F                 Y++SG+               +C +   LA 
Sbjct: 284 KNGFVEEAIWLFRGF--------------YLKSGN---------------VCSNEDVLAA 314

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+ GC++  +++ G+ +H   IK G    + +  +L+ +YA+   + +A  + +G   K 
Sbjct: 315 VLYGCTISGSVKNGVGVHAHTIKIGAFPSISIENSLMGMYARFEQIDAAHFVFEGMKVKD 374

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLA--GMEPDPVTFSRLLSLSASQACLVRGR 484
              +N I+S   +  +D   + M LFS    A  G+ PD VT   +L   ++   L +G+
Sbjct: 375 IVSWNTIISCLAK--SDRVNEAMELFSVLHAAAGGLAPDFVTVLSILQACSNAGLLHQGQ 432

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            LH Y +K+G+  DV + NALITMYAK G ID A  IF+ +  +D+VSWN+M++AY +HG
Sbjct: 433 MLHGYIMKSGFVYDVSICNALITMYAKLGRIDFAEMIFERMDIKDLVSWNSMINAYGMHG 492

Query: 545 LGKGALLLFEEMKREGF-APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
            G  AL +F ++K  G   P+ I+ + V+ AC +SGL   G   F  + + + + P ++H
Sbjct: 493 DGHLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLISEGYKCFESMGRDHSIEPSMDH 552

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           +AC+VDLLGR+GR +EA   I   P   +  +W  L++  +L  N   +  A+K L  LE
Sbjct: 553 YACVVDLLGRSGRFAEAEEFIRDMPVHPNSSIWGPLLAACQLHGNVDLAEKAAKELSALE 612

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS-KLHHFVASGKD 722
           P+     + +SN YA  G   +AAK+RT M  + L KE G S++++   +   FV++   
Sbjct: 613 PESDIWRVSLSNTYASAGRWRDAAKIRTEMRRVGLRKETGWSFVDVGGVESFKFVSADTR 672

Query: 723 HPESEEIYSKLDLLNDEM 740
           H ++EEIYS    +N  M
Sbjct: 673 HHDAEEIYSVWHSMNRHM 690



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 189/414 (45%), Gaps = 34/414 (8%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D +LG+ VH +L+  G   D F   +L+N+YAK   +  A++L  G+  R  ++WT++I 
Sbjct: 151 DERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKAGDVVSARRLVLGLPCRDVVSWTAIIS 210

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G + +G  E  L +   M       N  T   +++ACSL+        +HA  +    E+
Sbjct: 211 GCVLNGMLEEGLEVFVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALVVLLELEH 270

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  V  SLI MY  +G   EA  +FRG                              +L 
Sbjct: 271 DASVVNSLIMMYAKNGFVEEAIWLFRGF-----------------------------YLK 301

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           S +   N+     V+  C  +  V+ G  +H   +K G    IS+ N+++ MY +    +
Sbjct: 302 SGNVCSNEDVLAAVLYGCTISGSVKNGVGVHAHTIKIGAFPSISIENSLMGMYARFEQID 361

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEFLDLGICCDSSCLATVIDG 370
            A  +F+ +  ++++SW  +IS   +S    +A+  F  L     G+  D   + +++  
Sbjct: 362 AAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEAMELFSVLHAAAGGLAPDFVTVLSILQA 421

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           CS    L  G  LHG+ +K G++ DV +  AL+ +YAK G +  A M+ +    K    +
Sbjct: 422 CSNAGLLHQGQMLHGYIMKSGFVYDVSICNALITMYAKLGRIDFAEMIFERMDIKDLVSW 481

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGME-PDPVTFSRLLSLSASQACLVRG 483
           N++++ +   +  D    + +F Q + AG   P+ +TF  ++S  +    +  G
Sbjct: 482 NSMINAY--GMHGDGHLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLISEG 533



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L  GQ +H +++KSG   D    N LI +YAK  R+D A+ +F+ M ++  ++W S+
Sbjct: 425 AGLLHQGQMLHGYIMKSGFVYDVSICNALITMYAKLGRIDFAEMIFERMDIKDLVSWNSM 484

Query: 131 IKGYLDDGD 139
           I  Y   GD
Sbjct: 485 INAYGMHGD 493


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 189/581 (32%), Positives = 313/581 (53%), Gaps = 6/581 (1%)

Query: 159 EHTCSVILEACSLLEDRIFGEQIHAFAI--KSGFENNVFVGTSLISMYFHSGCFREAENV 216
           EHT   +L+  +  ++  FG+ IHA  I      ++N+    SLI++Y        A  +
Sbjct: 26  EHTIQ-LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARIL 84

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF-EPNDYTFTNVISVCYENLG 275
           F G+  ++V     ++  Y   G       +F  ++S D+  PN+Y F  +IS C ++  
Sbjct: 85  FDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQ 144

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           V EG Q HG A+K G+V    V NA++ MY +    + A  ++  +   ++ S+  +I+G
Sbjct: 145 VVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIING 204

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
            + +G+  +A+      +D  I  D+    T    CS   +L LGLQ+H    + G   D
Sbjct: 205 LLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYD 264

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
             + +A++D+Y K G++ +AR + +    K    + AIL+ + +      E+ +  F + 
Sbjct: 265 SFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQN--GCFEEALNFFPEM 322

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
            + G+ P+  TF+ LL+  A  + L  G+ LH    K+G+   +IVGNALI MY+K GSI
Sbjct: 323 EVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSI 382

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           + A ++F  +  RD ++W+AM+   + HGLG+ AL++F+EM      P  ++ +GVL AC
Sbjct: 383 EAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSAC 442

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            + G  + G    N++ +  G+ P +EH+ C+V LL +AGRL EA N + S+P     + 
Sbjct: 443 AHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVA 502

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           WRTL+S   +  N       ++ +L ++P D G++IL+SNMYA     D   K+R  M +
Sbjct: 503 WRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRE 562

Query: 696 LRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
             + KE G SWIEI + +H FV+ GK HPES +IY K+  L
Sbjct: 563 RNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQEL 603



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 252/503 (50%), Gaps = 12/503 (2%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLL--KSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           QL+K+S  + +LK G+ +HA L+     ++++  + N+LINLYAK +++ VA+ LFDGM 
Sbjct: 30  QLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMR 89

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGE 179
            R+ ++W +L+ GY  +G    VL +   M   +  + NE+  + I+ +CS     + G 
Sbjct: 90  KRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGW 149

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           Q H +A+KSG   + +V  +LI MY      + A +V+  +   DV   N +I    + G
Sbjct: 150 QCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENG 209

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
               A  V   ++      ++ T+     +C     +  G Q+H    + G   +  V +
Sbjct: 210 YPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSS 269

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           AI+ MYGK G    A ++F+ +  +N++SWTA+++ Y ++G   +A+N F E    G+  
Sbjct: 270 AIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLP 329

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +    A +++ C+  S L  G  LH    K G+   + +G AL+++Y+K G +++A  + 
Sbjct: 330 NEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVF 389

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME-PDPVTFSRLLSLSASQA 478
               C+ +  ++A++ G        E   +V+F Q+ LA  E P  VTF  +LS  A   
Sbjct: 390 LEMICRDSITWSAMICGLSHHGLGRE--ALVVF-QEMLAAKECPHYVTFVGVLSACAHLG 446

Query: 479 CLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAM 536
            +  G   L+    +TG    V     ++ +  K G +D A    K    + D+V+W  +
Sbjct: 447 SVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTL 506

Query: 537 LSAYALH---GLGKGALLLFEEM 556
           LSA  +H   GLGK    L  +M
Sbjct: 507 LSACHVHQNYGLGKKVAELVLQM 529


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 179/593 (30%), Positives = 312/593 (52%), Gaps = 39/593 (6%)

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCF---REAENVFRGLAYKDVRCVNFMILEYNKA 238
           HA  +K+G  N  +  + L+ +   S  F     A +VF      ++   N M+     +
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            +      ++V ++S    PN YTF  ++  C ++   EEG+Q+H   +K G   +    
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121

Query: 299 NAIVTMYGKHGMSEEAERMFDA-------------------------------ISERNLI 327
            ++++MY ++G  E+A ++FD                                I+ER+++
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           SW A+I+GYV +    +A+  F E +   +  D   L +V+  C+   ++ELG ++H   
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 388 I-KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
              HG+ S +++  A + +Y+K GD++ A  L +G SCK    +N ++ G+     +  +
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTH--MNLYK 299

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK--TGYAADVIVGNA 504
           + ++LF +   +G  P+ VT   +L   A    +  GR +H Y  K   G      +  +
Sbjct: 300 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTS 359

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           LI MYAKCG I+ A Q+F  +  + + SWNAM+  +A+HG    A  LF  M++ G  PD
Sbjct: 360 LIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPD 419

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
           DI+++G+L AC +SGL + G  +F  + Q Y + P LEH+ CM+DLLG AG   EA  +I
Sbjct: 420 DITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEII 479

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
           +  P     ++W +L+   K+  N + +   +++L+++EP+++GS++L+SN+YA  G  +
Sbjct: 480 HMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWE 539

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           + A++R  +N   + K  GCS IEIDS +H F+   K HP+S EIY  L+ ++
Sbjct: 540 DVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMD 592



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 230/506 (45%), Gaps = 45/506 (8%)

Query: 80  VHAFLLKSGSQNDTFEANNLINL---YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            HA ++K+G  N  +  + L+ L      F+ L  A  +F+     + + W ++++G   
Sbjct: 1   THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
             D  S L +   M       N +T   +L++C+  +    G QIHA  +K G E + + 
Sbjct: 61  SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120

Query: 197 GTSLISMYFHSG-------------------C------------FREAENVFRGLAYKDV 225
            TSLISMY  +G                   C             R A  VF  +  +DV
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
              N MI  Y +    E A  +F  ++ ++  P++ T  +V+S C ++  +E G+++H L
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240

Query: 286 A-VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
                G    + + NA + +Y K G  E A  +F+ +S ++++SW  LI GY       +
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTAL 402
           A+  F E L  G   +   + +V+  C+    +++G  +H +  K   G  +   L T+L
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSL 360

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGME 461
           +D+YAK GD+++A  + +    K  + +NA++ GF M   A+   D   LFS+ R  G+E
Sbjct: 361 IDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFD---LFSRMRKNGIE 417

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAF 519
           PD +T   LLS  +    L  GR +   S+   Y     + +   +I +    G    A 
Sbjct: 418 PDDITLVGLLSACSHSGLLDLGRHIFK-SVTQDYNITPKLEHYGCMIDLLGHAGLFKEAE 476

Query: 520 QIFKGIS-DRDIVSWNAMLSAYALHG 544
           +I   +  + D V W ++L A  +HG
Sbjct: 477 EIIHMMPMEPDGVIWCSLLKACKMHG 502



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 162/357 (45%), Gaps = 34/357 (9%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD---------- 110
           +P L+K    S   + G+ +HA ++K G + D +   +LI++YA+  RL+          
Sbjct: 86  FPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSS 145

Query: 111 ---------------------VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
                                 A+K+FD +  R  ++W ++I GY+++  YE  L +  +
Sbjct: 146 QRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKE 205

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA-IKSGFENNVFVGTSLISMYFHSG 208
           M R+  + +E T   +L AC+       G +IH       GF +++ +  + I +Y   G
Sbjct: 206 MMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG 265

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
               A  +F GL+ KDV   N +I  Y      + A  +F  +L S   PND T  +V+ 
Sbjct: 266 DVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 325

Query: 269 VCYENLGVEEGKQLHGLAVKF--GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
            C     ++ G+ +H    K   GV    ++  +++ MY K G  E A ++F+++  ++L
Sbjct: 326 ACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSL 385

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
            SW A+I G+   G    A + F      GI  D   L  ++  CS    L+LG  +
Sbjct: 386 SSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHI 442



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 5/268 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           SG ++LG+ +H  +        + +  N  I LY+K   +++A  LF+G+  +  ++W +
Sbjct: 228 SGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNT 287

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-- 187
           LI GY     Y+  L +  +M RS E  N+ T   +L AC+ L     G  IH +  K  
Sbjct: 288 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRL 347

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G  N   + TSLI MY   G    A  VF  + +K +   N MI  +   G +  AF +
Sbjct: 348 KGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDL 407

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYG 306
           F  +  +  EP+D T   ++S C  +  ++ G+ +   +   + +  ++     ++ + G
Sbjct: 408 FSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLG 467

Query: 307 KHGMSEEAERMFDAIS-ERNLISWTALI 333
             G+ +EAE +   +  E + + W +L+
Sbjct: 468 HAGLFKEAEEIIHMMPMEPDGVIWCSLL 495


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 217/749 (28%), Positives = 371/749 (49%), Gaps = 46/749 (6%)

Query: 25  KKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFL 84
           K   + T  P   +Q A L +  SVS        ND   L+ +S+   D++L +AVHA +
Sbjct: 61  KPYALLTSHPPLSNQPALLSNFPSVSNDT----VNDHYYLLDLSVRYDDVELIKAVHASI 116

Query: 85  LKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL 144
            K     D   AN LI  Y K   +  A K+F G+   + +++T++I G+         +
Sbjct: 117 FKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAM 174

Query: 145 GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
            I   M  S  + NE +   IL  C  L D   G Q+HA  IK GF N  FV  +L+ +Y
Sbjct: 175 EIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLY 234

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD-FEPNDYTF 263
              G       +F  + ++D+   N +I    K    E AF +F  +   D F  + +T 
Sbjct: 235 GKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTL 294

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK---------------- 307
           + ++ V    L    G+++H   +K G    ISV NA++  Y K                
Sbjct: 295 STIL-VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRV 353

Query: 308 ---------------HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
                           G+++ A  +FD +  RN IS+ A++SG+ ++G G KA+  F   
Sbjct: 354 RDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRM 413

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
           ++ G+      L  V++ C +    ++  Q+HGF +K G+ S+  +  AL+D+  + G +
Sbjct: 414 VEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRM 473

Query: 413 KSARMLLDGFSCKYTAE--FNAILSGFMEKIADDEEDVMVLFSQQRLAG-MEPDPVTFSR 469
             A+ +    S   +    + +++ G+        E+ + LF Q +L G M  D V  + 
Sbjct: 474 ADAQKMFSQGSFSQSGSIIWTSMICGYARN--AQPEEAISLFCQSQLEGAMVVDKVASTA 531

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +L +  + A    G+ +H +++K+G+ +D+ VGN++ITMY+KC ++D A ++F  +   D
Sbjct: 532 VLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHD 591

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY--SGLSEGGICL 587
           IVSWN +++ + LH  G  AL ++ +M++ G  PD ++ + ++ A  +  S L +    L
Sbjct: 592 IVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRL 651

Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           F  ++ IY + P +EH+  +V +LG  G L EA  +IN  P      +WR L+   ++ +
Sbjct: 652 FLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHS 711

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           N+     A+K LL ++P D  ++ILVSN+Y+  G    +  VR  M      K  G SWI
Sbjct: 712 NTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWI 771

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLL 736
             ++K+H F A  K HP++++I+S L+LL
Sbjct: 772 IHENKVHSFYARDKSHPQAKDIHSGLELL 800


>gi|357516795|ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355522708|gb|AET03162.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 699

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 210/671 (31%), Positives = 339/671 (50%), Gaps = 22/671 (3%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           QA H   +KSGS +D + +NNLI  Y+K  +L +A +LFD M  R  ++W ++I GY++ 
Sbjct: 19  QATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNT 78

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
            D +S   +   M  S   F+ HT    L+  +  +    G+Q+H+  IK     NVF G
Sbjct: 79  ADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSG 138

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           ++L+ MY   G   +A  VFR +   +    N +I  Y++ G+ +MAF +          
Sbjct: 139 SALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVG 198

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
            +D T + ++++           QLH   VK G+     V NAI+T Y +    ++AER+
Sbjct: 199 IDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERV 258

Query: 318 FD---AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
           F     ++ R+L++W ++++ Y+       A + F+E    G   D      VI GCS+ 
Sbjct: 259 FVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIK 318

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD---LKSARMLLDGFSCKYTAEFN 431
            +   G  LHG  IK G    V +  AL+ +Y  G D   ++ A  +      K    +N
Sbjct: 319 EHKSRGESLHGLVIKRGAEVSVPVSNALIAMYL-GFDNRCMEDALRIFFSMDVKDCCTWN 377

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           ++L+G+++      ED + LF Q R   +E D  TFS ++   +  A L  G+ +H  S+
Sbjct: 378 SVLAGYVQ--VGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSL 435

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G+  +  VG               A + F+  S+ + + WN+++  YA HG G  AL 
Sbjct: 436 KVGFDTNKYVGK-------------DAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALE 482

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF  M+ +   PD I+ + VL AC ++GL E G  +   +E  +G+   +EH+AC VDL 
Sbjct: 483 LFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLY 542

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           GRAG L E   L+ + PF    ++ RTL+   +   N + +   +K LL LEP+D  +++
Sbjct: 543 GRAGYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYV 602

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+S++Y    M DE A V   M +  + K  G SWIE+ +K+H F A    HP+S+EIY 
Sbjct: 603 LLSDLYGRLKMWDEKASVTRLMRERGVKKVPGWSWIEVKNKVHAFNAEDHSHPQSKEIYE 662

Query: 732 KLDLLNDEMKL 742
            L  L + + L
Sbjct: 663 LLLQLKEGIML 673



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 204/422 (48%), Gaps = 28/422 (6%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LGQ +H+ ++K     + F  + L+++YAK  R+D A  +F  M   + ++W +LI G
Sbjct: 116 LELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAG 175

Query: 134 YLDDGDYESVLGIACDMYRSEE----KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           Y   GD    L +A  + R +E      ++ T S +L     +       Q+H   +K G
Sbjct: 176 YSRVGD----LDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHG 231

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRG---LAYKDVRCVNFMILEYNKAGESEMAFH 246
            E    V  ++I+ Y      ++AE VF G   +  +D+   N M+  Y    +  +AF 
Sbjct: 232 LEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFD 291

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY- 305
           VF+ + S  FEP+DY++T VIS C        G+ LHGL +K G    + V NA++ MY 
Sbjct: 292 VFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYL 351

Query: 306 -GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
              +   E+A R+F ++  ++  +W ++++GYV+ G    A+  F++   L +  D    
Sbjct: 352 GFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTF 411

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           + VI  CS  + L+LG Q+H  ++K G+ ++  +G             K A+   +  S 
Sbjct: 412 SAVIRCCSDLATLQLGQQVHVLSLKVGFDTNKYVG-------------KDAKKCFETTSN 458

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
                +N+I+ G+ +         + LF   R   ++PD +TF  +L+  +    +  GR
Sbjct: 459 DNAIIWNSIIFGYAQH--GQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGR 516

Query: 485 SL 486
            +
Sbjct: 517 KI 518


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 217/749 (28%), Positives = 371/749 (49%), Gaps = 46/749 (6%)

Query: 25  KKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFL 84
           K   + T  P   +Q A L +  SVS        ND   L+ +S+   D++L +AVHA +
Sbjct: 43  KPYALLTSHPPLSNQPALLSNFPSVSNDT----VNDHYYLLDLSVRYDDVELIKAVHASI 98

Query: 85  LKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL 144
            K     D   AN LI  Y K   +  A K+F G+   + +++T++I G+         +
Sbjct: 99  FKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAM 156

Query: 145 GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
            I   M  S  + NE +   IL  C  L D   G Q+HA  IK GF N  FV  +L+ +Y
Sbjct: 157 EIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLY 216

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD-FEPNDYTF 263
              G       +F  + ++D+   N +I    K    E AF +F  +   D F  + +T 
Sbjct: 217 GKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTL 276

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK---------------- 307
           + ++ V    L    G+++H   +K G    ISV NA++  Y K                
Sbjct: 277 STIL-VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRV 335

Query: 308 ---------------HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
                           G+++ A  +FD +  RN IS+ A++SG+ ++G G KA+  F   
Sbjct: 336 RDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRM 395

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
           ++ G+      L  V++ C +    ++  Q+HGF +K G+ S+  +  AL+D+  + G +
Sbjct: 396 VEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRM 455

Query: 413 KSARMLLDGFSCKYTAE--FNAILSGFMEKIADDEEDVMVLFSQQRLAG-MEPDPVTFSR 469
             A+ +    S   +    + +++ G+        E+ + LF Q +L G M  D V  + 
Sbjct: 456 ADAQKMFSQGSFSQSGSIIWTSMICGYARN--AQPEEAISLFCQSQLEGAMVVDKVASTA 513

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +L +  + A    G+ +H +++K+G+ +D+ VGN++ITMY+KC ++D A ++F  +   D
Sbjct: 514 VLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHD 573

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY--SGLSEGGICL 587
           IVSWN +++ + LH  G  AL ++ +M++ G  PD ++ + ++ A  +  S L +    L
Sbjct: 574 IVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRL 633

Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           F  ++ IY + P +EH+  +V +LG  G L EA  +IN  P      +WR L+   ++ +
Sbjct: 634 FLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHS 693

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           N+     A+K LL ++P D  ++ILVSN+Y+  G    +  VR  M      K  G SWI
Sbjct: 694 NTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWI 753

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLL 736
             ++K+H F A  K HP++++I+S L+LL
Sbjct: 754 IHENKVHSFYARDKSHPQAKDIHSGLELL 782


>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 189/608 (31%), Positives = 312/608 (51%), Gaps = 9/608 (1%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           RS  TW  +I+   ++G +   L I   M  S    N  T  ++L+AC+ L     G  +
Sbjct: 9   RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   +K GF+ + FV T+L+ MY        A  VF  +  + V   N M+  Y++    
Sbjct: 69  HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSM 128

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE----GKQLHGLAVKFGVVR-EIS 296
           + A  +   +    FEP   TF +++S  Y NL   E    GK +H   +K G+V  E+S
Sbjct: 129 DQALSLLKEMWVLGFEPTASTFVSILS-GYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVS 187

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           + N+++ MY +  + +EA ++FD + E+++ISWT +I GYV+ GH  +A   F +     
Sbjct: 188 LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQS 247

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D      +I GC    +L L   +H   +K G      +   L+ +YAK G+L SAR
Sbjct: 248 VGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSAR 307

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            + D    K    + ++++G++        + + LF +     + P+  T + ++S  A 
Sbjct: 308 RIFDLIIEKSMLSWTSMIAGYVH--LGHPGEALDLFRRMIRTDIRPNGATLATVVSACAD 365

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L  G+ +  Y    G  +D  V  +LI MY+KCGSI  A ++F+ ++D+D+  W +M
Sbjct: 366 LGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSM 425

Query: 537 LSAYALHGLGKGALLLFEEMKR-EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           +++YA+HG+G  A+ LF +M   EG  PD I    V  AC +SGL E G+  F  +++ +
Sbjct: 426 INSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDF 485

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           G+ P +EH  C++DLLGR G+L  A+N I   P      +W  L+S  ++  N +   LA
Sbjct: 486 GITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELA 545

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           + RLLD  P  +GS++L++N+Y   G   EA  +R +M+   L KE+G S +E+    H 
Sbjct: 546 TVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQVEVTDTYHT 605

Query: 716 FVASGKDH 723
           F    +  
Sbjct: 606 FAVGNQSQ 613



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 237/492 (48%), Gaps = 11/492 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K       ++ G  +H  +LK G Q DTF    L+++Y+K + +  A+++FD M 
Sbjct: 49  YPLLLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMP 108

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL---EDRIF 177
            RS ++W +++  Y      +  L +  +M+    +    T   IL   S L   E  + 
Sbjct: 109 QRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLL 168

Query: 178 GEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           G+ IH   IK G     V +  SL+ MY       EA  VF  +  K +     MI  Y 
Sbjct: 169 GKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYV 228

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           K G +  A+ +F  +       +   F N+IS C +   +     +H L +K G   +  
Sbjct: 229 KIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDP 288

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V N ++TMY K G    A R+FD I E++++SWT++I+GYV  GH G+A++ F   +   
Sbjct: 289 VENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTD 348

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  + + LATV+  C+   +L +G ++  +   +G  SD ++ T+L+ +Y+K G +  AR
Sbjct: 349 IRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAR 408

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA-GMEPDPVTFSRLLSLSA 475
            + +  + K    + ++++ +   I     + + LF +   A G+ PD + ++ +  L+ 
Sbjct: 409 EVFERVTDKDLTVWTSMINSY--AIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVF-LAC 465

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGI-SDRDIVS 532
           S + LV     +  S++  +     V +   LI +  + G +D A    +G+  D     
Sbjct: 466 SHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQV 525

Query: 533 WNAMLSAYALHG 544
           W  +LSA  +HG
Sbjct: 526 WGPLLSACRIHG 537


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 193/638 (30%), Positives = 341/638 (53%), Gaps = 6/638 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G  VHA   K G  ++ +  + L+N+YAK +++D A+++F+ +  R+ + W +++ G
Sbjct: 325 LNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGG 384

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +  +G  + V+     M R   + +E T + I  AC+ L    FG Q+H   IK+ F +N
Sbjct: 385 FAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASN 444

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FV  +L+ MY  SG  +EA   F  +   D    N +I+ Y +   ++ AF +F  ++S
Sbjct: 445 LFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVS 504

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +   P++ +  +++S C     ++ G+Q H L VK G+      G++++ MY K G+   
Sbjct: 505 NGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLA 564

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F ++  RN++S  ALI+GY   GH  +AI+ F E   +G+       A ++DGC  
Sbjct: 565 ARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDG 623

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRL-GTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFN 431
              L LG Q+HG  +K G+LS   +   +L+ +Y        +  L       K    + 
Sbjct: 624 AFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWT 683

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A++SG+ ++  +  E  +  +   R   + PD   F+ +L   A  + L  G+ +H+   
Sbjct: 684 ALISGYAQQ--NHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIF 741

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGAL 550
            TG+  D +  ++LI MYAKCG + G+ Q+F+ +  R +++SWN+M+   A +G  + AL
Sbjct: 742 HTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEAL 801

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            +F++M+++   PD+++ LGVL AC ++G    G  +F+ +   Y L+P ++H  CMVD+
Sbjct: 802 EIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDI 861

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGR G L+EA   IN       P+LW TL+   +   +      A+ +L++L+P+ + S+
Sbjct: 862 LGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSY 921

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           +L+S++YA       A  +R  M    + K  G SWIE
Sbjct: 922 VLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 171/614 (27%), Positives = 275/614 (44%), Gaps = 53/614 (8%)

Query: 35  NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTF 94
           NP S+   +C           L F++ P+ V  ++ +      + +H+  LK G      
Sbjct: 24  NPHSEFLQICLQHCWRIQAHNL-FDEKPKPVLQALSTA-----KVIHSKSLKIGVGLKGL 77

Query: 95  EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE 154
             N +++LY K   +D AQK F  +  +    W S++  YLD G + +V+     M+  E
Sbjct: 78  LGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHE 137

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
            + NE T +++L ACS L+D  FG Q+H    K+GF    F    LI MY      R+A 
Sbjct: 138 VRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDAR 197

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
            VF G    D      +I  Y + G    A  VF  +      P+  T   V+       
Sbjct: 198 LVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVV------- 250

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
                                   NA V +    G   +A ++F  I   N+++W  +IS
Sbjct: 251 ------------------------NAYVAL----GRLADARKLFTQIPNPNVVAWNVMIS 282

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           G+ + G   +AI+ FLE    G+    S L +V+   +  S L  G  +H  A K G   
Sbjct: 283 GHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDD 342

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +V +G+ALV++YAK   + +A+ + +    +    +NA+L GF +      ++VM  FS 
Sbjct: 343 NVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQN--GLAQEVMEFFSC 400

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            +  G +PD  TF+ + S  AS   L  G  LH   IK  +A+++ V NAL+ MYAK G+
Sbjct: 401 MKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGA 460

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +  A + F+ +   D VSWNA++  Y        A  +F  M   G  PD++S+  ++ A
Sbjct: 461 LKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSA 520

Query: 575 CI-YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           C     L  G  C    ++   GL       + ++D+  + G +  A ++  S P     
Sbjct: 521 CANVQELKRGQQCHCLLVK--VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPS---- 574

Query: 634 LLWRTLVSVSKLMA 647
              R +VSV+ L+A
Sbjct: 575 ---RNVVSVNALIA 585



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/571 (24%), Positives = 269/571 (47%), Gaps = 16/571 (2%)

Query: 78  QAVHAF--LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +AV  F  + + G   D      ++N Y    RL  A+KLF  +   + + W  +I G+ 
Sbjct: 226 EAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHA 285

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
             G  E  +    ++ ++  K    +   +L A + L    +G  +HA A K G ++NV+
Sbjct: 286 KRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVY 345

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           VG++L++MY        A+ VF  L  +++   N M+  + + G ++     F  +    
Sbjct: 346 VGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHG 405

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P+++TFT++ S C     +  G QLH + +K      + V NA+V MY K G  +EA 
Sbjct: 406 PQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEAR 465

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           + F+ +   + +SW A+I GYV+  +  +A   F   +  G+  D   LA+++  C+   
Sbjct: 466 KQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQ 525

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L+ G Q H   +K G  +    G++L+D+Y K G + +AR +      +     NA+++
Sbjct: 526 ELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIA 585

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+        E+ + LF + ++ G++P  VTF+ LL        L  GR +H   +K G+
Sbjct: 586 GY---TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGF 642

Query: 496 -AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGLGKGALLLF 553
            ++  +V  +L+ +Y        +  +F  +   + +V W A++S YA     + AL  +
Sbjct: 643 LSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFY 702

Query: 554 EEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQ-IYGLRPILEHFAC--MVD 609
           + M+ +   PD  +   VL+AC   S L  G      EI   I+     ++   C  ++D
Sbjct: 703 QHMRSDNILPDQAAFASVLRACAGMSSLQNG-----QEIHSLIFHTGFNMDEVTCSSLID 757

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           +  + G +  ++ +    P   + + W +++
Sbjct: 758 MYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 170/377 (45%), Gaps = 7/377 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +LK GQ  H  L+K G    T   ++LI++Y K   +  A+ +F  M  R+ ++  +LI 
Sbjct: 526 ELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIA 585

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF-E 191
           GY   G  E  + +  ++     K  E T + +L+ C        G QIH   +K GF  
Sbjct: 586 GY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLS 644

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFHVFVH 250
           ++  V  SL+ +Y +S  F ++E +F  L Y K +     +I  Y +    E A   + H
Sbjct: 645 SSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQH 704

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + S +  P+   F +V+  C     ++ G+++H L    G   +    ++++ MY K G 
Sbjct: 705 MRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGD 764

Query: 311 SEEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            + + ++F  +  R N+ISW ++I G  ++G+  +A+  F +     I  D      V+ 
Sbjct: 765 VKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLS 824

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDV--RLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
            CS    +  G ++    + +  L      LG  +VDI  + G L  A   ++   CK  
Sbjct: 825 ACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLG-CMVDILGRWGFLNEAEEFINKLGCKAD 883

Query: 428 AEFNAILSGFMEKIADD 444
               + L G   K  D+
Sbjct: 884 PMLWSTLLGACRKHGDE 900



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 148/323 (45%), Gaps = 23/323 (7%)

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK-- 440
           +H  ++K G      LG  +VD+Y K G++  A+        K    +N++LS +++   
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
            A   +  + +++ +    + P+  TF+ +LS  +    +  GR +H    KTG+     
Sbjct: 123 FATVVQSFVCMWNHE----VRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSF 178

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
               LI MYAKC  +  A  +F G  + D VSW A+++ Y   G    A+ +F+ M+R G
Sbjct: 179 CQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVG 238

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            APD I+++ V+ A +  G       LF +I       P +  +  M+    + G   EA
Sbjct: 239 HAPDQITLVTVVNAYVALGRLADARKLFTQIPN-----PNVVAWNVMISGHAKRGFAEEA 293

Query: 621 MNL--------INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           ++         + ++  S   +L   + S+S L   S     A+K  LD +    GS ++
Sbjct: 294 ISFFLELKKTGLKATRSSLGSVL-SAIASLSMLNYGSMVHAQATKEGLD-DNVYVGSALV 351

Query: 673 VSNMYAGQGMLDEAAKVRTTMND 695
             NMYA    +D A +V  ++ +
Sbjct: 352 --NMYAKCSKMDAAKQVFNSLGE 372



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 22/238 (9%)

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           +P PV    L +LS ++        +H+ S+K G     ++GN ++ +Y KCG++D A +
Sbjct: 49  KPKPV----LQALSTAKV-------IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQK 97

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
            F  +  +D+ +WN++LS Y  HGL    +  F  M      P++ +   VL AC  SGL
Sbjct: 98  AFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSAC--SGL 155

Query: 581 SE---GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
            +   G        +  +G R   +    ++D+  +   L +A  L+     +   + W 
Sbjct: 156 QDVNFGRQVHCGVFKTGFGFRSFCQ--GGLIDMYAKCRYLRDA-RLVFDGALNLDTVSWT 212

Query: 638 TLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
            L++  V          +    + +   P D  + + V N Y   G L +A K+ T +
Sbjct: 213 ALIAGYVRDGFPMEAVKVFDRMQRVGHAP-DQITLVTVVNAYVALGRLADARKLFTQI 269



 Score = 46.2 bits (108), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR- 122
           +++   G   L+ GQ +H+ +  +G   D    ++LI++YAK   +  + ++F  M  R 
Sbjct: 720 VLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRN 779

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           + I+W S+I G   +G  E  L I   M +     +E T   +L ACS
Sbjct: 780 NVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACS 827


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 209/777 (26%), Positives = 369/777 (47%), Gaps = 112/777 (14%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+LG  VHA L+ +G     F  + L+ +Y +   ++ A+++FD M  R+  +WT++++
Sbjct: 104 NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIME 163

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            Y   GDYE  + +   M     + +      + +ACS L++   G+ ++ + +  GFE 
Sbjct: 164 MYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEG 223

Query: 193 NVFVGTSLISMYFHSG-------CFREAE--NVF-----------RGLAYKDVRCV---- 228
           N  V  S++ M+   G        F E E  +VF           +G   K ++C+    
Sbjct: 224 NSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMK 283

Query: 229 -----------NFMILEYNKAGESEMA--------------------------------- 244
                      N +I  Y ++G+ E A                                 
Sbjct: 284 LSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYD 343

Query: 245 ---FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNA 300
                VF  ++    +PN  T  + +S C     +  G+++HG  +K   +  ++ VGN+
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI-------------- 346
           +V  Y K    E A R F  I + +L+SW A+++GY   G   +AI              
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463

Query: 347 --------NGFLEFLD-------------LGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
                    GF ++ D             +G+  +++ ++  +  C    NL+LG ++HG
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHG 523

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
           + +++       +G+AL+ +Y+    L+ A  +    S +    +N+I+S   +  +   
Sbjct: 524 YVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQ--SGRS 581

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
            + + L  +  L+ +E + VT    L   +  A L +G+ +H + I+ G      + N+L
Sbjct: 582 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSL 641

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           I MY +CGSI  + +IF  +  RD+VSWN M+S Y +HG G  A+ LF+  +  G  P+ 
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNH 701

Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
           I+   +L AC +SGL E G   F  ++  Y + P +E +ACMVDLL RAG+ +E +  I 
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761

Query: 626 SSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDE 685
             PF  +  +W +L+   ++  N   +  A++ L +LEP+ +G+++L++N+Y+  G  ++
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821

Query: 686 AAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY---SKLDLLNDE 739
           AAK+R  M +  ++K  GCSWIE+  KLH FV     HP  E+I     KLD+  DE
Sbjct: 822 AAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKDGKLDVDEDE 878



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 197/436 (45%), Gaps = 34/436 (7%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           IL+ C  L +   G Q+HA  + +G +   F+G+ L+ +Y  +GC  +A  +F  ++ ++
Sbjct: 95  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     ++  Y   G+ E    +F  +++    P+ + F  V   C E      GK ++ 
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             +  G      V  +I+ M+ K G  + A R F+ I  +++  W  ++SGY   G   K
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+    +    G+  D      +I G +     E   +   + ++ G L D +       
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFE---EASKYFLEMGGLKDFK------- 324

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
                                    + A+++G  +   D E   + +F +  L G++P+ 
Sbjct: 325 --------------------PNVVSWTALIAGSEQNGYDFE--ALSVFRKMVLEGVKPNS 362

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           +T +  +S   + + L  GR +H Y IK     +D++VGN+L+  YAKC S++ A + F 
Sbjct: 363 ITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFG 422

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
            I   D+VSWNAML+ YAL G  + A+ L  EMK +G  PD I+  G++      G  + 
Sbjct: 423 MIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKA 482

Query: 584 GICLFNEIEQIYGLRP 599
            +  F  +  + G+ P
Sbjct: 483 ALEFFQRMHSM-GMDP 497


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 173/485 (35%), Positives = 278/485 (57%), Gaps = 4/485 (0%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMYGKHGMSEEAER 316
           P+   ++ ++  C     VE+G+ +H   V    +   + + N IV MY K G  ++A R
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           MFD +  +++++WTALI+G+ ++     A+  F + L LG   +   L++++        
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L+ G QLH F +K+GY S V +G+ALVD+YA+ G + +A++  DG   K    +NA++SG
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
              K  + E  + +L+  QR    +P   T+S +LS  AS   L +G+ +HA+ IK+G  
Sbjct: 265 HARK-GEGEHALHLLWKMQR-KNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLK 322

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
               +GN L+ MYAK GSID A ++F  +   D+VSWN ML+  A HGLGK  L  FE+M
Sbjct: 323 LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQM 382

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
            R G  P++IS L VL AC +SGL + G+  F E+ + Y + P + H+   VDLLGR G 
Sbjct: 383 LRIGIEPNEISFLCVLTACSHSGLLDEGLYYF-ELMKKYKVEPDVPHYVTFVDLLGRVGL 441

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A   I   P   +  +W  L+   ++  N +  + A++R  +L+P D+G  +L+SN+
Sbjct: 442 LDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNI 501

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA  G   + AKVR  M +  + K+  CSW+EI++ +H FVA+ + HP  +EI  K + +
Sbjct: 502 YASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEI 561

Query: 737 NDEMK 741
           + ++K
Sbjct: 562 SGKIK 566



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 192/380 (50%), Gaps = 1/380 (0%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLI-NLYAKFNRLDVAQKLF 116
           +N + +L+K     G ++ G+ VHA L+ S   ++     N+I N+YAK   LD A+++F
Sbjct: 87  YNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMF 146

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           D M  +  +TWT+LI G+  +      L +   M R   + N  T S +L+A        
Sbjct: 147 DEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLD 206

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G Q+HAF +K G++++V+VG++L+ MY   G    A+  F G+  K     N +I  + 
Sbjct: 207 PGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHA 266

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           + GE E A H+   +   +F+P  +T+++V+S C     +E+GK +H   +K G+     
Sbjct: 267 RKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAF 326

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           +GN ++ MY K G  ++A+R+FD + + +++SW  +++G  + G G + ++ F + L +G
Sbjct: 327 IGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIG 386

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +      V+  CS    L+ GL       K+    DV      VD+  + G L  A 
Sbjct: 387 IEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAE 446

Query: 417 MLLDGFSCKYTAEFNAILSG 436
             +     + TA     L G
Sbjct: 447 RFIREMPIEPTAAVWGALLG 466


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 169/565 (29%), Positives = 300/565 (53%), Gaps = 3/565 (0%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+HA  I+ G   N F+    +++Y   G       +F  ++ +++     +I  +  
Sbjct: 94  GKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAH 153

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
               + A   F  +         +  ++V+  C     ++ G Q+H L VK G   E+ V
Sbjct: 154 NSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFV 213

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G+ +  MY K G   +A + F+ +  ++ + WT++I G+V++G   KA+  +++ +   +
Sbjct: 214 GSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDV 273

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   L + +  CS       G  LH   +K G+  +  +G AL D+Y+K GD+ SA  
Sbjct: 274 FIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASN 333

Query: 418 LLDGFS-CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           +    S C       AI+ G++E   D  E  +  F   R  G+EP+  TF+ L+   A+
Sbjct: 334 VFQIHSDCISIVSLTAIIDGYVE--MDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACAN 391

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
           QA L  G  LH   +K  +  D  V + L+ MY KCG  D + Q+F  I + D ++WN +
Sbjct: 392 QAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTL 451

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +  ++ HGLG+ A+  F  M   G  P+ ++ + +L+ C ++G+ E G+  F+ +E+IYG
Sbjct: 452 VGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYG 511

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P  EH++C++DLLGRAG+L EA + IN+ PF  +   W + +   K+  + + +  A+
Sbjct: 512 VVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAA 571

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
            +L+ LEP+++G+ +L+SN+YA +   ++   +R  + D  ++K  G SW++I +K H F
Sbjct: 572 DKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVF 631

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
                 HP+ +EIY KLD L D++K
Sbjct: 632 GVEDWSHPQKKEIYEKLDNLLDQIK 656



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 236/510 (46%), Gaps = 21/510 (4%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
            L++    + +L  G+ +HA L++ G   +TF +N+ +NLY+K   LD   KLFD M  R
Sbjct: 80  HLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQR 139

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + ++WTS+I G+  +  ++  L   C M    E   +   S +L+AC+ L    FG Q+H
Sbjct: 140 NMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVH 199

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
              +K GF   +FVG++L  MY   G   +A   F  +  KD      MI  + K G+ +
Sbjct: 200 CLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFK 259

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A   ++ +++ D   + +   + +S C        GK LH   +K G   E  +GNA+ 
Sbjct: 260 KALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALT 319

Query: 303 TMYGKHGMSEEAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
            MY K G    A  +F   S+  +++S TA+I GYV      KA++ F++    GI  + 
Sbjct: 320 DMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNE 379

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
               ++I  C+  + LE G QLHG  +K  +  D  + + LVD+Y K G    +  L D 
Sbjct: 380 FTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDE 439

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
                   +N ++  F +       + +  F+     G++P+ VTF  LL    S A +V
Sbjct: 440 IENPDEIAWNTLVGVFSQHGLG--RNAIETFNGMIHRGLKPNAVTFVNLLK-GCSHAGMV 496

Query: 482 RGRSLHAYSIKTGYAADVIVG----NALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAM 536
                +  S++  Y   V+      + +I +  + G +  A      +  + ++  W + 
Sbjct: 497 EDGLNYFSSMEKIYG--VVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSF 554

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDI 566
           L A  +HG          +M+R  FA D +
Sbjct: 555 LGACKIHG----------DMERAKFAADKL 574



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 199/408 (48%), Gaps = 12/408 (2%)

Query: 240 ESEMAFHVFVHLLSSDFEPNDY-TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           E  ++F    +L  S  + +D  T  ++I        + +GKQLH + ++ G +    + 
Sbjct: 54  EEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLS 113

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N  + +Y K G  +   ++FD +S+RN++SWT++I+G+  +    +A++ F +    G  
Sbjct: 114 NHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEI 173

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
                L++V+  C+    ++ G Q+H   +K G+  ++ +G+ L D+Y+K G+L  A   
Sbjct: 174 ATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKA 233

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +   CK    + +++ GF++    D +  +  + +     +  D       LS  ++  
Sbjct: 234 FEEMPCKDAVLWTSMIDGFVKN--GDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALK 291

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAML 537
               G+SLHA  +K G+  +  +GNAL  MY+K G +  A  +F+  SD   IVS  A++
Sbjct: 292 ASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAII 351

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             Y      + AL  F +++R G  P++ +   +++AC      E G  L  ++ +    
Sbjct: 352 DGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFK 411

Query: 598 R-PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP--LLWRTLVSV 642
           R P +   + +VD+ G+ G    ++ L +     E+P  + W TLV V
Sbjct: 412 RDPFVS--STLVDMYGKCGLFDHSIQLFDE---IENPDEIAWNTLVGV 454


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 188/632 (29%), Positives = 326/632 (51%), Gaps = 4/632 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +HA  L+ G   D F  N L+  YA   +   A+++FD M  R  ++W SL+  +L 
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLV 197

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G +         M RS    N  +   ++ AC   ++  FG  IHA A+K G    V +
Sbjct: 198 NGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNL 257

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L+ MY   G    +  VF G+  ++    N  I  +  AG       +F  +   + 
Sbjct: 258 ANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNV 317

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P   T ++++    E    + G+++HG ++K  +  +I V N++V MY K G  E+A  
Sbjct: 318 MPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKAST 377

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F+ + +RN++SW A+I+  V++G   +A     +    G C +S  L  V+  C+  ++
Sbjct: 378 IFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMAS 437

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L++G Q+H ++I+ G + D+ +  AL+D+Y+K G L  AR + +  S K    +N ++ G
Sbjct: 438 LKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILG 496

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           + +     E   ++LF Q R  G++ D V+F   LS   + +    G+ +H   ++   +
Sbjct: 497 YSQSPWCFES--LLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLS 554

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
               + N+L+ +Y K G +  A +IF  I+ +D+ SWN M+  Y +HG    A  LFE M
Sbjct: 555 GHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELM 614

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K +G   D +S + VL AC + GL + G   F+++     + P   H+ACMVDLLGRAG+
Sbjct: 615 KGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVA-QNIEPQQMHYACMVDLLGRAGQ 673

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           LS+   +I   PF  +  +W  L+   ++  N + +  A++ L +L+P+ +G + L+ NM
Sbjct: 674 LSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINM 733

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           YA  G  +EA K+R  M   ++ K    SW++
Sbjct: 734 YAETGRWNEANKIRKLMKSRKVQKNPAYSWVQ 765


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 175/551 (31%), Positives = 298/551 (54%), Gaps = 35/551 (6%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A ++F  +   ++   N M   +    +S  A  ++V ++S    PN Y+F  ++  C +
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
           +  + EG+Q+HG  +K G   ++ V  ++++MY ++G  E+A ++FD  S R+++S+TAL
Sbjct: 78  SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137

Query: 333 ISGYVRSGHGGKA------------------INGFLE-------------FLDLGICCDS 361
           I+GY   G+   A                  I+G++E              +   +  D 
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           S + TV+  C+   ++ELG QLH +   HG+ S++++   L+D+Y+K G++++A  L  G
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            + K    +N ++ G      +  ++ ++LF +   +G  P+ VT   +L   A    + 
Sbjct: 258 LAKKDVISWNTLIGGHTH--MNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 315

Query: 482 RGRSLHAYSIK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
            GR +H Y  K   G      +  +LI MYAKCG I+ A Q+F  +  R + SWNAM+  
Sbjct: 316 IGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFG 375

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           +A+HG    A  LF +M++ G  PDDI+ +G+L AC +SG+ + G  +F  + Q Y + P
Sbjct: 376 FAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITP 435

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            LEH+ CM+DLLG  G   EA  +I + P     ++W +L+   K+  N +     ++ L
Sbjct: 436 KLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNL 495

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           + +EP++ GS++L+SN+YA  G  D+ AK+RT +ND  + K  GCS IEIDS +H F+  
Sbjct: 496 IKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIG 555

Query: 720 GKDHPESEEIY 730
            K HP + EIY
Sbjct: 556 DKFHPRNREIY 566



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 228/479 (47%), Gaps = 41/479 (8%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           L   F+ L  A  +F+ +   + + W ++ +G+  + D  + L +   M       N ++
Sbjct: 8   LSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYS 67

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF---- 217
              +L++C+  +  I G+QIH   +K G++ +++V TSLISMY  +G   +A  VF    
Sbjct: 68  FPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSS 127

Query: 218 ----------------RG-----------LAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
                           RG           ++ KDV   N MI  Y +    + A  ++  
Sbjct: 128 HRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKD 187

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++ ++ +P++ T   V+S C ++  +E G+QLH      G    I + N ++ +Y K G 
Sbjct: 188 MMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE 247

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A  +F  ++++++ISW  LI G+       +A+  F E L  G   +   + +V+  
Sbjct: 248 VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPA 307

Query: 371 CSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           C+    +++G  +H +  K   G  +   L T+L+D+YAK GD+++A+ + D    +  +
Sbjct: 308 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS 367

Query: 429 EFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
            +NA++ GF M   A+   D   LFS+ R  G++PD +TF  LLS  +    L  GR + 
Sbjct: 368 SWNAMIFGFAMHGKANAAFD---LFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIF 424

Query: 488 AYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
             S+   Y     + +   +I +   CG    A ++ + +  + D V W ++L A  +H
Sbjct: 425 R-SMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMH 482



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 173/377 (45%), Gaps = 41/377 (10%)

Query: 42  YLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNL 99
           Y+C IS        LL N +  P L+K    S  L  GQ +H  +LK G   D +   +L
Sbjct: 53  YVCMIS------LGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSL 106

Query: 100 INLYAKFNRLD-------------------------------VAQKLFDGMLVRSAITWT 128
           I++YA+  RL+                                A+KLFD + V+  ++W 
Sbjct: 107 ISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWN 166

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++I GY++  +++  L +  DM ++  K +E T   ++ AC+       G Q+H++    
Sbjct: 167 AMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDH 226

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF +N+ +   LI +Y   G    A  +F+GLA KDV   N +I  +      + A  +F
Sbjct: 227 GFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLF 286

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVREISVGNAIVTMYG 306
             +L S   PND T  +V+  C     ++ G+ +H    K   GV    S+  +++ MY 
Sbjct: 287 QEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYA 346

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  E A+++FD++  R+L SW A+I G+   G    A + F +    GI  D      
Sbjct: 347 KCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVG 406

Query: 367 VIDGCSVCSNLELGLQL 383
           ++  CS    L+LG  +
Sbjct: 407 LLSACSHSGMLDLGRHI 423



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 133/269 (49%), Gaps = 4/269 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG ++LG+ +H+++   G  ++    N LI+LY+K   ++ A  LF G+  +  I+W +L
Sbjct: 210 SGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTL 269

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK--S 188
           I G+     Y+  L +  +M RS E  N+ T   +L AC+ L     G  IH +  K   
Sbjct: 270 IGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLK 329

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  N   + TSLI MY   G    A+ VF  +  + +   N MI  +   G++  AF +F
Sbjct: 330 GVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLF 389

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGK 307
             +  +  +P+D TF  ++S C  +  ++ G+ +   ++  + +  ++     ++ + G 
Sbjct: 390 SKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGH 449

Query: 308 HGMSEEAERMFDAIS-ERNLISWTALISG 335
            G+ +EA+ M   +  E + + W +L+  
Sbjct: 450 CGLFKEAKEMIRTMPMEPDGVIWCSLLKA 478


>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 201/687 (29%), Positives = 344/687 (50%), Gaps = 60/687 (8%)

Query: 104 AKFNRLDVAQKLF---DGMLVRSAIT----WTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           A  N L+ AQ+ F   D  ++ S +T    +TS  +G L D  +++V  I      + + 
Sbjct: 41  ASCNALESAQETFTSVDASMIDSLLTSLKEFTS--RGNLLDA-FKTVSLIRLHASSASQD 97

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY------FHSGCF 210
              H  S +L +C+ ++    G Q+H   I  GFE +  +   L++ Y        +   
Sbjct: 98  LIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVI 157

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
            E  N+     +      N +I  Y + G  + A   +  ++     P+++T+ +V+  C
Sbjct: 158 TENSNILHPFPW------NLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKAC 211

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
            E L +  GK++H       +   + V NA+++MYGK G    A  +FD I ER+ +SW 
Sbjct: 212 GEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWN 271

Query: 331 ALIS-----------------------------------GYVRSGHGGKAINGFLEFLDL 355
           ++IS                                   GY+R+G+   A+    +    
Sbjct: 272 SMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKC 331

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   DS  L   +  CS   + +LG ++H FAI+  +     +  AL+ +Y++  DLK A
Sbjct: 332 GSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHA 391

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
            +L      K    +N+I+SG      D  E+   L  +  L G+EP+ VT + +L L A
Sbjct: 392 YLLFQLMEAKSLITWNSIISGCCH--MDRSEEASFLLREMLLFGIEPNYVTIASVLPLCA 449

Query: 476 SQACLVRGRSLHAY-SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
             A L  G+  H Y + +  +   +++ NAL+ MYA+ G +  A ++F  + +RD +++ 
Sbjct: 450 RVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYT 509

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           +M++ Y + G G+ AL LFEEM      PD I+++ VL AC +SGL   G  LF ++  +
Sbjct: 510 SMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSL 569

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           YGL P LEHFACM DL GRAG L++A  +I + P+  +P +W TL+   ++  N++    
Sbjct: 570 YGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEW 629

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
           A+++LL+++P++ G ++L++NMYA  G  ++ AKVR  M DL + K  GC+W+++ +   
Sbjct: 630 AAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFS 689

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMK 741
            F+     +  ++EIY  L+ L   MK
Sbjct: 690 PFLVDDTSNANADEIYPLLEGLTMVMK 716



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/532 (21%), Positives = 223/532 (41%), Gaps = 59/532 (11%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +H  ++  G +        L+  Y+ FN L  A  + +   +     W  LI  Y+ 
Sbjct: 119 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVR 178

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  +  L     M +   + +  T   +L+AC    D  FG+++H     S  + ++ V
Sbjct: 179 NGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIV 238

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +LISMY   G    A ++F  +  +D    N MI  Y   G    AF +F  + + D 
Sbjct: 239 HNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDI 298

Query: 257 EPNDYTFTNV-----------------------------------ISVCYENLGVEEGKQ 281
           E N   +  +                                   +  C      + GK+
Sbjct: 299 ELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKE 358

Query: 282 LHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           +H  A++  FG V   +V NA++TMY +    + A  +F  +  ++LI+W ++ISG    
Sbjct: 359 IHSFAIRSCFGEVD--TVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHM 416

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRL 398
               +A     E L  GI  +   +A+V+  C+  +NL+ G + H +  +     D + L
Sbjct: 417 DRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLL 476

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
             ALVD+YA+ G +  AR + D    +    + ++++G+   +  + +  + LF +    
Sbjct: 477 WNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGY--GMQGEGQAALKLFEEMNNF 534

Query: 459 GMEPDPVTFSRLLSLSASQACLVRG-------RSLHAYSIKTGYAADVIVGNALITMYAK 511
            ++PD +T   +LS  +    + +G       RSL+  +    + A       +  ++ +
Sbjct: 535 QIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFA------CMTDLFGR 588

Query: 512 CGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGKGALLLFEEMKRE 559
            G ++ A +I + +  +   + W  ++ A  +H    +G+ A     EMK E
Sbjct: 589 AGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPE 640



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 31/279 (11%)

Query: 72  GDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           GD KLG+ +H+F ++S   + DT + N LI +Y++   L  A  LF  M  +S ITW S+
Sbjct: 351 GDAKLGKEIHSFAIRSCFGEVDTVK-NALITMYSRCKDLKHAYLLFQLMEAKSLITWNSI 409

Query: 131 IKGYLDDGDYESVLGIACDMYRSEE-------------KFNEHTCSVILEACSLLEDRIF 177
           I G              C M RSEE             + N  T + +L  C+ + +   
Sbjct: 410 ISG-------------CCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQH 456

Query: 178 GEQIHAFAI-KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           G++ H +   +  F++++ +  +L+ MY  SG   EA  VF  L  +D      MI  Y 
Sbjct: 457 GKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYG 516

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREI 295
             GE + A  +F  + +   +P+  T   V+S C  +  V +G+ L   +   +G+   +
Sbjct: 517 MQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHL 576

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLIS-WTALI 333
                +  ++G+ G+  +A+ +   +  +   + W  LI
Sbjct: 577 EHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLI 615


>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
 gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
          Length = 683

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 199/674 (29%), Positives = 347/674 (51%), Gaps = 59/674 (8%)

Query: 106 FNRL-DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           FN L D+A+K   G L+++  T+ SLIK +    + +++L               H+ S 
Sbjct: 6   FNSLKDLARK---GHLLKAFETF-SLIKLHASSANRDAIL---------------HSISS 46

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L +C+ L+    G+Q+HA  I  GFEN++ +   L++ Y       +A  +       +
Sbjct: 47  LLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVN 106

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH- 283
               N +I  Y   G    A   +  ++     P+++T+ +V+  C E L ++ G+++H 
Sbjct: 107 PLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHE 166

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG--- 340
            +   +G    + V N++V+MYGK G  + A R+F+ + ER+ +SW  +IS Y   G   
Sbjct: 167 SINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWK 226

Query: 341 ------------------------HGG----KAINGFLEFLDLGICCDSSC--LATVID- 369
                                    GG    +   G LE L     CD     +A +I  
Sbjct: 227 EAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGL 286

Query: 370 -GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS    ++LG  +H  AI+  +     +  AL+ +Y++  DL+ A +L      K   
Sbjct: 287 GACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLT 346

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N++LSG+     D  E+   LF +   +G+EP+ VT + +L   A  A L +G+  H 
Sbjct: 347 TWNSMLSGYTH--MDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHC 404

Query: 489 YSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           Y ++  G+   +++ N+L+ MYA+ G +  A ++F  +  RD V++ ++++ Y + G GK
Sbjct: 405 YIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGK 464

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL LF+EM +    PD ++++ VL AC +SGL   G  LF ++  +YG+ P +EHF+CM
Sbjct: 465 TALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCM 524

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VDL GRAG L++A  +I S P+  +  +W TLV   ++  N++    A+++LL+++P++ 
Sbjct: 525 VDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENP 584

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
           G ++L++NM+A  G   + A+VRT M DL + K  GC+W+++ S    FV        S 
Sbjct: 585 GYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWVDVGSGFSPFVVGDTSKHNSN 644

Query: 728 EIYSKLDLLNDEMK 741
           ++Y  L+ L D MK
Sbjct: 645 DLYELLEGLTDLMK 658



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 197/441 (44%), Gaps = 41/441 (9%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           +P ++K      DL  G+ VH  +  + G + + +  N+L+++Y KF  LD A++LF+ M
Sbjct: 145 YPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQM 204

Query: 120 LVRSAITWTSLIKGYLDDG-----------------------------------DYESVL 144
             R A++W  +I  Y   G                                   +++  L
Sbjct: 205 PERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGAL 264

Query: 145 GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
            +   M R +   +     + L ACS +     G  IHA AI+S F+    V  +LI+MY
Sbjct: 265 ELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMY 324

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
                 R A+ +F+ +  K +   N M+  Y     SE A  +F  +L S  EPN  T  
Sbjct: 325 SRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIA 384

Query: 265 NVISVCYENLGVEEGKQLHGLAVKF-GVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
           +++  C     +++GK+ H   ++  G    + + N++V MY + G    A+R+FD++  
Sbjct: 385 SILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRR 444

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG-LQ 382
           R+ +++T+LI+GY   G G  A+  F E +   I  D   +  V+  CS    +  G + 
Sbjct: 445 RDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVL 504

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
               +  +G +  V   + +VD++ + G L  A+ ++     + T    A L G      
Sbjct: 505 FEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHG 564

Query: 443 DDEEDVMVLFSQQRLAGMEPD 463
           + E   +  ++ ++L  M+P+
Sbjct: 565 NTE---IGEWAAEKLLEMKPE 582



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 120/528 (22%), Positives = 227/528 (42%), Gaps = 44/528 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ +HA  +  G +N       L+  Y+ F+ L  A  +     + + + W  LI  
Sbjct: 57  LPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISS 116

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH-AFAIKSGFEN 192
           Y+++G +   L    +M     + +  T   +L+AC    D  FG ++H +     G   
Sbjct: 117 YVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRW 176

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N++V  SL+SMY   G    A  +F  +  +D    N +I  Y   G  + AF +F  + 
Sbjct: 177 NLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMR 236

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQL------------------------HGLAVK 288
            +  E N  T+  +   C +    +   +L                        H  A+K
Sbjct: 237 LAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIK 296

Query: 289 FGVVREIS-----------VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
            G V   S           V NA++TMY +      A+ +F +I  ++L +W +++SGY 
Sbjct: 297 LGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYT 356

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH-GYLSDV 396
                 +A   F E L  GI  +   +A+++  C+  +NL+ G + H + ++  G+   +
Sbjct: 357 HMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYL 416

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            L  +LV++YA+ G + SA+ + D    +    + ++++G+   I  + +  + LF +  
Sbjct: 417 LLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGY--GIQGEGKTALKLFDEMI 474

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSL-HAYSIKTGYAADVIVGNALITMYAKCGSI 515
              ++PD VT   +LS  +    +  G  L    S   G    V   + ++ ++ + G +
Sbjct: 475 KHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLL 534

Query: 516 DGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGKGALLLFEEMKRE 559
           + A ++   +  R   + W  ++ A  +HG   +G+ A     EMK E
Sbjct: 535 NKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPE 582


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 188/582 (32%), Positives = 309/582 (53%), Gaps = 34/582 (5%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + N+F   +++S+Y   G   + + +F  + ++D    N  I  Y   G    A  V+  
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 251 LLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           +L  +    N  TF+ ++ +C +   V+ G+Q++G  +KFG   ++ VG+ +V MY K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 310 MSEEAERMFDAISERNL-------------------------------ISWTALISGYVR 338
           +  +A+R FD + ERN+                               ISWT +I+G ++
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G   +A++ F E    G   D     +V+  C     L  G Q+H + I+  +  +V +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           G+ALVD+Y+K   +KSA  +      K    + A+L G+ +     EE V + F  QR  
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQN-GFSEEAVKIFFEMQR-N 365

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G+EPD  T   ++S  A+ A L  G   H  ++ +G  + + V NALIT+Y KCGS + +
Sbjct: 366 GVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENS 425

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F  ++ RD VSW A+L+ YA  G     + LFE M   G  PD ++ +GVL AC  +
Sbjct: 426 HRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRA 485

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           GL E G+  F  + + +G+ PI++H  C++DLLGRAGRL EA N IN+ P     + W T
Sbjct: 486 GLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWAT 545

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+S  ++  + +    A+  L+ LEP++  S++L+S++YA +G  D+ A++R  M D R+
Sbjct: 546 LLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRV 605

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
            KE G SWI+   K+H F A  +  P   +IY++L+ LN +M
Sbjct: 606 RKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKM 647



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 213/436 (48%), Gaps = 36/436 (8%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFN---------------------------- 107
           LG+ ++  +LK G  +D F  + L+++Y K                              
Sbjct: 156 LGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLM 215

Query: 108 ---RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
               ++ +Q+LF G+  R +I+WT +I G + +G     L +  +M  +    ++ T   
Sbjct: 216 RCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGS 275

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L AC  L     G+QIHA+ I++  ++NVFVG++L+ MY      + AE VF+ +  K+
Sbjct: 276 VLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKN 335

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     M++ Y + G SE A  +F  +  +  EP+D+T  +VIS C     +EEG Q H 
Sbjct: 336 VISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHC 395

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            A+  G++  I+V NA++T+YGK G +E + R+F  ++ R+ +SWTAL++GY + G   +
Sbjct: 396 RALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANE 455

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALV 403
            I  F   L  G+  D      V+  CS    +E GLQ     IK HG +  V   T ++
Sbjct: 456 TIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCII 515

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP- 462
           D+  + G L+ AR  ++   C       A L        D E   +  ++   L  +EP 
Sbjct: 516 DLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDME---IGKWAADSLIALEPQ 572

Query: 463 DPVTFSRLLSLSASQA 478
           +P ++  L SL AS+ 
Sbjct: 573 NPASYVLLSSLYASKG 588



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/559 (25%), Positives = 243/559 (43%), Gaps = 70/559 (12%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVA------ 112
           N +  L+K+   S +    + +H  +LK+  Q +TF +NNLI  Y K   L  A      
Sbjct: 6   NYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDH 65

Query: 113 -------------------------QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIA 147
                                    Q++F+ M  R  ++W   I GY + G     + + 
Sbjct: 66  IPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVY 125

Query: 148 CDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY-- 204
             M + +    N  T S +L  CS       G QI+   +K GF ++VFVG+ L+ MY  
Sbjct: 126 KLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTK 185

Query: 205 -----------------------------FHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
                                           G   E++ +F GL  +D      MI   
Sbjct: 186 LGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGL 245

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G    A  +F  +  + F  + +TF +V++ C   L + EGKQ+H   ++      +
Sbjct: 246 MQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNV 305

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VG+A+V MY K    + AE +F  + ++N+ISWTA++ GY ++G   +A+  F E    
Sbjct: 306 FVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRN 365

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D   L +VI  C+  ++LE G Q H  A+  G +S + +  AL+ +Y K G  +++
Sbjct: 366 GVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENS 425

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             L    + +    + A+L+G+ +    +E   + LF +    G++PD VTF  +LS  +
Sbjct: 426 HRLFTEMNIRDEVSWTALLAGYAQFGKANE--TIGLFERMLAHGLKPDGVTFIGVLSACS 483

Query: 476 SQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSW 533
               + +G       IK  G    V     +I +  + G ++ A      +    D+V W
Sbjct: 484 RAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGW 543

Query: 534 NAMLSAYALHG---LGKGA 549
             +LS+  +HG   +GK A
Sbjct: 544 ATLLSSCRVHGDMEIGKWA 562



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 223/498 (44%), Gaps = 76/498 (15%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N +I  Y K G    A HVF H+     +PN +++                         
Sbjct: 44  NNLITAYYKLGNLAYAHHVFDHIP----QPNLFSW------------------------- 74

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
                     N I+++Y K G+  + +++F+ +  R+ +SW   ISGY   G    A+  
Sbjct: 75  ----------NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRV 124

Query: 349 F-LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
           + L   D  +  +    +T++  CS    ++LG Q++G  +K G+ SDV +G+ LVD+Y 
Sbjct: 125 YKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYT 184

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFME--------------KIADD--------- 444
           K G +  A+   D    +     N +++G M               K  D          
Sbjct: 185 KLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITG 244

Query: 445 ------EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
                 E + + +F + RLAG   D  TF  +L+   S   L  G+ +HAY I+T +  +
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           V VG+AL+ MY+KC SI  A  +FK +  ++++SW AML  Y  +G  + A+ +F EM+R
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364

Query: 559 EGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
            G  PDD ++  V+ +C   + L EG    F+    + GL   +     ++ L G+ G  
Sbjct: 365 NGVEPDDFTLGSVISSCANLASLEEGA--QFHCRALVSGLISFITVSNALITLYGKCGST 422

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL--DLEPKDAGSFILVSN 675
             +  L       +  + W  L++       +  +I   +R+L   L+P D  +FI V +
Sbjct: 423 ENSHRLFTEMNIRDE-VSWTALLAGYAQFGKANETIGLFERMLAHGLKP-DGVTFIGVLS 480

Query: 676 MYAGQGMLDEAAKVRTTM 693
             +  G++++  +   +M
Sbjct: 481 ACSRAGLVEKGLQYFESM 498


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 215/741 (29%), Positives = 373/741 (50%), Gaps = 20/741 (2%)

Query: 14  FKSQQSLPPLKKKV-----PINTFSPNP-----KSQVAYLCSISSVSCSERTLLFND--- 60
           +K +QS   LK+ V     P  T S N       +Q A+   +++ +   +T + +D   
Sbjct: 4   YKPKQSPSGLKRCVVSLPHPATTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYT 63

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K         LG  +H  +L SG   D + A++LIN YAKF   DVA+K+FD M 
Sbjct: 64  FPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMP 123

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ + WT++I  Y   G       +  +M R   + +  T   +L   S L      + 
Sbjct: 124 ERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHV---QC 180

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H  AI  GF +++ +  S++++Y   G    +  +F  + ++D+   N +I  Y + G 
Sbjct: 181 LHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGN 240

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
                 +   +    FE    TF +V+SV      ++ G+ LHG  ++ G   +  V  +
Sbjct: 241 ICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETS 300

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K G  + A RMF+  S+++++ WTA+ISG V++G   KA+  F + L  G+   
Sbjct: 301 LIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPS 360

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           ++ +A+VI  C+   +  LG  + G+ ++     DV    +LV +YAK G L  + ++ D
Sbjct: 361 TATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFD 420

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             + +    +NA+++G+ +     E   + LF++ R     PD +T   LL   AS   L
Sbjct: 421 MMNRRDLVSWNAMVTGYAQNGYVCE--ALFLFNEMRSDNQTPDSITIVSLLQGCASTGQL 478

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H++ I+ G    ++V  +L+ MY KCG +D A + F  +   D+VSW+A++  Y
Sbjct: 479 HLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGY 538

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG G+ AL  + +    G  P+ +  L VL +C ++GL E G+ ++  + + +G+ P 
Sbjct: 539 GYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPD 598

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKRL 659
           LEH AC+VDLL RAGR+ EA N +    F +  L +   ++   +   N++     +  +
Sbjct: 599 LEHHACVVDLLSRAGRVEEAYN-VYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDI 657

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           L L P DAG+F+ +++ YA     +E  +  T M  L L K  G S+I+I   +  F   
Sbjct: 658 LMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTD 717

Query: 720 GKDHPESEEIYSKLDLLNDEM 740
              HP+ +EI   L +L  EM
Sbjct: 718 HNSHPQFQEIVCTLKILRKEM 738


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 178/569 (31%), Positives = 305/569 (53%), Gaps = 3/569 (0%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G  +H + +K GF     V  +LIS Y  S    +A  VF  +  +D+   N +I     
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  + A  +FV +     E +  T  +V+  C ++     G  +HG +V+ G++ E S+
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA++ MY          ++F  + ++N++SWTA+I+ Y R+GH  K    F E    GI
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   + + +D  +   +L+ G  +HG+AI++G    + +  AL+++Y K G ++ AR 
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D  + K T  +N ++ G+      +E     LF++  L  + P+ VT + +L  +AS 
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANE--AFTLFNEMLLQ-LRPNAVTMACILPAAASL 299

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           + L RGR +HAY+++ GY  D  V NAL+ MY KCG++  A ++F  +++++++SW  M+
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMI 359

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y +HG G+ A+ LFE+MK  G  PD  S   +L AC +SGL + G   FN +   + +
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRI 419

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P L+H+ACMVDLL   G L EA   I + P      +W +L+   ++  N K +   ++
Sbjct: 420 EPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAE 479

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            + +LEP++ G ++L++N+YA     +   K++  +    L +  GCSWIE+  K H F 
Sbjct: 480 MVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFF 539

Query: 718 ASGKDHPESEEIYSKLDLLNDEMKLKVKD 746
           A  ++HP+   I   LD +   M+ +  D
Sbjct: 540 AENRNHPQGMRIAEFLDDVARRMQEEGHD 568



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 204/395 (51%), Gaps = 3/395 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH +L+K G        N LI+ YAK NR++ A  +FD M  R  I+W S+I G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G Y+  + +   M+   ++ +  T   ++ AC        G  +H +++++G  +   +
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G +L+ MY +   +R    +FR +  K+V     MI  Y +AG  +    +F  +     
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ +  T+ +     N  ++ GK +HG A++ G+   + V NA++ MY K G  EEA  
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD +++++ ISW  LI GY RS    +A   F E L L +  ++  +A ++   +  S+
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSS 301

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           LE G ++H +A++ GYL D  +  ALVD+Y K G L  AR L D  + K    +  +++G
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           +   +     D + LF Q + +G++PD  +FS +L
Sbjct: 362 Y--GMHGRGRDAIALFEQMKGSGIQPDAGSFSAIL 394



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 212/445 (47%), Gaps = 26/445 (5%)

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           +G  +HG  VK+G   + +V NA+++ Y K    E+A  +FD + +R++ISW ++I G  
Sbjct: 2   DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
            +G   KA+  F+     G   DS+ L +V+  C       +G  +HG++++ G +S+  
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           LG AL+D+Y+   D +S   +      K    + A+++ +    A   + V  LF +  L
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTR--AGHFDKVAGLFQEMGL 179

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
            G+ PD    +  L   A    L  G+S+H Y+I+ G    + V NAL+ MY KCG ++ 
Sbjct: 180 EGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEE 239

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI- 576
           A  IF  ++ +D +SWN ++  Y+   L   A  LF EM  +   P+ +++  +L A   
Sbjct: 240 ARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAAS 298

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILE-HFA--CMVDLLGRAGRLSEAMNLINSSPFSESP 633
            S L  G      E+      R  LE +F    +VD+  + G L  A  L +    +++ 
Sbjct: 299 LSSLERG-----REMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLT-NKNL 352

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLL--DLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
           + W  +++   +    + +I   +++    ++P DAGSF  +    +  G+ DE  +   
Sbjct: 353 ISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQP-DAGSFSAILYACSHSGLRDEGWRFFN 411

Query: 692 TMNDLRLSKEAGCSWIEIDSKLHHF 716
            M +             I+ KL H+
Sbjct: 412 AMRNEH----------RIEPKLKHY 426



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 168/341 (49%), Gaps = 2/341 (0%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +G  VH + +++G  ++T   N L+++Y+  +      K+F  M  ++ ++WT++I  Y 
Sbjct: 103 IGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYT 162

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
             G ++ V G+  +M     + +    +  L+A +  E    G+ +H +AI++G E  + 
Sbjct: 163 RAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLP 222

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  +L+ MY   G   EA  +F  +  KD    N +I  Y+++  +  AF +F  +L   
Sbjct: 223 VANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQ 281

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             PN  T   ++        +E G+++H  AV+ G + +  V NA+V MY K G    A 
Sbjct: 282 LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLAR 341

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           R+FD ++ +NLISWT +I+GY   G G  AI  F +    GI  D+   + ++  CS   
Sbjct: 342 RLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSG 401

Query: 376 NLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
             + G +  +    +H     ++    +VD+    G+LK A
Sbjct: 402 LRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEA 442



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 1/210 (0%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G+  LK G++VH + +++G +     AN L+ +Y K   ++ A+ +FD +  +  I+W +
Sbjct: 198 GNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNT 257

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI GY           +  +M   + + N  T + IL A + L     G ++HA+A++ G
Sbjct: 258 LIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRG 316

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           +  + FV  +L+ MY   G    A  +F  L  K++     MI  Y   G    A  +F 
Sbjct: 317 YLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFE 376

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
            +  S  +P+  +F+ ++  C  +   +EG
Sbjct: 377 QMKGSGIQPDAGSFSAILYACSHSGLRDEG 406


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 172/518 (33%), Positives = 285/518 (55%), Gaps = 4/518 (0%)

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLL--SSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           C N ++  +  AG  E A H+F+ +L  +S    + +T    +  C     ++ G+ +  
Sbjct: 85  CYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQA 144

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            AVK G+V +  V ++++ MY   G    A  +FDA  E  ++ W A+++ Y+++G   +
Sbjct: 145 YAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWME 204

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
            +  F   L++G+  D   L +V+  C    + +LG  + G   + G   + +L TAL+D
Sbjct: 205 VVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMD 264

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +YAK G++  AR L DG   +    ++A++SG+ +  AD   + + LFS+ +LA +EP+ 
Sbjct: 265 MYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQ--ADQCREALGLFSEMQLARVEPND 322

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           VT   +LS  A    L  G+ +H+Y  +   +   I+G AL+  YAKCG ID A + F+ 
Sbjct: 323 VTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFES 382

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           +  ++  +W A++   A +G G+ AL LF  M+  G  P D++ +GVL AC +S L E G
Sbjct: 383 MPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEG 442

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
              F+ + + YG++P +EH+ CMVDLLGRAG + EA   I + P   + ++WR L+S   
Sbjct: 443 RRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCA 502

Query: 645 LMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
           +  N      A K+++ L P  +G ++L+SN+YA  G   +AA VR  M D  + K  GC
Sbjct: 503 VHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGC 562

Query: 705 SWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
           S IE+D  +  F A   DHPE  EIY K++ +   +K+
Sbjct: 563 SLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKV 600



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 226/497 (45%), Gaps = 23/497 (4%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           PQL    I SG+L         LL++ + + T     L+       RL     L      
Sbjct: 33  PQLHAALIKSGELTGSAKSFHSLLEAAAASPT-----LLPYAVSLFRLGPRPPL------ 81

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE--KFNEHTCSVILEACSLLEDRIFGE 179
            S   +  L++ +L  G  E  L +  +M  +      ++HT +  L++CS +     G 
Sbjct: 82  -STPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGR 140

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            + A+A+K G   + FV +SLI MY   G    A  VF       V   N ++  Y K G
Sbjct: 141 GVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNG 200

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           +      +F  +L      ++ T  +V++ C      + GK + G   + G+ R   +  
Sbjct: 201 DWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVT 260

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ MY K G   +A R+FD +  R++++W+A+ISGY ++    +A+  F E     +  
Sbjct: 261 ALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEP 320

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   + +V+  C+V   LE G  +H +  +        LGTALVD YAK G +  A    
Sbjct: 321 NDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAF 380

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    K +  + A++ G        E   + LFS  R AG+EP  VTF  +L ++ S +C
Sbjct: 381 ESMPVKNSWTWTALIKGMATNGRGRE--ALELFSSMREAGIEPTDVTFIGVL-MACSHSC 437

Query: 480 LVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAM 536
           LV     H  S+   Y     V +   ++ +  + G +D A+Q  + +  + + V W A+
Sbjct: 438 LVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRAL 497

Query: 537 LSAYALH---GLGKGAL 550
           LS+ A+H   G+G+ AL
Sbjct: 498 LSSCAVHRNVGIGEEAL 514


>gi|359491917|ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 767

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 201/708 (28%), Positives = 338/708 (47%), Gaps = 106/708 (14%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           + +  N +I+ +A   ++  A+KLF+ M  R +++W S++ GY  +G+ E+ + +   M 
Sbjct: 59  NVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMV 118

Query: 152 RS----EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
           R      + F   + S +++A   L       Q+H FA K  F  +  V TS++ MY   
Sbjct: 119 RDCCCVPDPF---SFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKC 175

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD------------ 255
           G    A+ VF       + C N MI  Y+K G  + A  +F  +   D            
Sbjct: 176 GAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILS 235

Query: 256 -------------------FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
                              F PN  T+ +V+S C     +E G  LH   V+     ++ 
Sbjct: 236 QHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVY 295

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
            G  ++ MY K G  E A ++FD ++E N +SWT+LI G  ++G   +A+  F +  ++ 
Sbjct: 296 AGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVP 355

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-------- 408
           +  D   LATV+  C    ++ +G QLH   I  G  S V +  ALV +YAK        
Sbjct: 356 VASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKAN 415

Query: 409 -----------------------GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
                                   GD++ AR   D    +    +N++L+ +M++     
Sbjct: 416 HAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQR--GYW 473

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
           E+ + ++ Q    G++ D +TFS  +S  A  A L+ G  + A + K G++++V V N++
Sbjct: 474 EEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSV 533

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           +TMY++CG I+ A ++F  I  +++VSWNAM++ YA +G G+  + +FE+M   G  PD 
Sbjct: 534 VTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQ 593

Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
           IS + VL                                    DLLGRAG+L +A NLIN
Sbjct: 594 ISYVSVLS-----------------------------------DLLGRAGQLEQAKNLIN 618

Query: 626 SSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDE 685
             PF  +  +W  L++  ++  N+K + LA K LL+L+ +  GS+ L++N+Y+  G +  
Sbjct: 619 QMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQG 678

Query: 686 AAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
              VR  M D  + K  GCSWIE+D+++H F     +HP+ ++++  L
Sbjct: 679 VTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 726



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 149/580 (25%), Positives = 255/580 (43%), Gaps = 112/580 (19%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH------------------- 206
           ++ C+ L       ++HA  I  G ++++F+   L++MY +                   
Sbjct: 1   MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 60

Query: 207 ------------SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
                       SG  REAE +F  +  +D    N M+  Y   GE E    VFV ++  
Sbjct: 61  YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVRD 120

Query: 255 -DFEPNDYTFTNVI----SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM----- 304
               P+ ++F+ V+    S+ Y  L +    QLHG A KF    +  V  +++ M     
Sbjct: 121 CCCVPDPFSFSCVMKASGSLGYLKLAL----QLHGFAEKFDFGIDTCVETSVLDMYIKCG 176

Query: 305 --------------------------YGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
                                     Y K+G  ++A  +F  + ER+ +SW  +IS   +
Sbjct: 177 AMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQ 236

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
            G G + +N FLE  + G   +S   A+V+  C+   +LE G  LH   ++     DV  
Sbjct: 237 HGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYA 296

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           G  L+D+YAK G L+SAR + DG +      + +++ G  +  A  +E+ +VLF+Q R  
Sbjct: 297 GCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQ--AGFQEEALVLFNQMREV 354

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI--- 515
            +  D  T + +L +  SQ  +  G  LHA++I  G  + V V NAL+TMYAKCG +   
Sbjct: 355 PVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKA 414

Query: 516 DGAFQI----------------------------FKGISDRDIVSWNAMLSAYALHGLGK 547
           + AF++                            F  + +R+++SWN+ML+ Y   G  +
Sbjct: 415 NHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWE 474

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
             L ++ +M REG   D I+    + AC    +   G  +  + E++ G    +     +
Sbjct: 475 EGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKL-GFSSNVSVANSV 533

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           V +  R G++ EA  + +S       ++ + LVS + +MA
Sbjct: 534 VTMYSRCGQIEEAQKMFSS-------IVMKNLVSWNAMMA 566



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 162/327 (49%), Gaps = 31/327 (9%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+ G  +HA +++     D +    LI++YAK  RL+ A+++FDG+   +A++WTSLI 
Sbjct: 274 DLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIG 333

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G    G  E  L +   M       ++ T + +L  C   +D   GEQ+HA  I  G ++
Sbjct: 334 GVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDS 393

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA-------- 244
           +V V  +L++MY   G   +A + F  +  +D+     MI  +++AG+ E A        
Sbjct: 394 SVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMP 453

Query: 245 -----------------------FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
                                    V++ +L    + +  TF+  IS C +   +  G Q
Sbjct: 454 ERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQ 513

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +   A K G    +SV N++VTMY + G  EEA++MF +I  +NL+SW A+++GY ++G 
Sbjct: 514 ILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQ 573

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVI 368
           G K I  F + L++G   D     +V+
Sbjct: 574 GRKVIEIFEKMLNIGNVPDQISYVSVL 600



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 199/471 (42%), Gaps = 64/471 (13%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K S   G LKL   +H F  K     DT    +++++Y K   +D AQK+F      S
Sbjct: 133 VMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPS 192

Query: 124 AITWTSLIKGYLDDGDYESVLGIAC-------------------------------DMYR 152
              W S+I GY   G  +  L +                                 +M+ 
Sbjct: 193 LFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWN 252

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
              + N  T + +L AC+ + D  +G  +HA  ++     +V+ G  LI MY   G    
Sbjct: 253 QGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLES 312

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF GL   +      +I    +AG  E A  +F  +       + +T   V+ VC  
Sbjct: 313 ARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLS 372

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK------------------------- 307
              +  G+QLH   +  G+   + V NA+VTMY K                         
Sbjct: 373 QKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAM 432

Query: 308 ------HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
                  G  E+A   FD + ERN+ISW ++++ Y++ G+  + +  +++ L  G+  D 
Sbjct: 433 ITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDW 492

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
              +T I  C+  + L LG Q+   A K G+ S+V +  ++V +Y++ G ++ A+ +   
Sbjct: 493 ITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSS 552

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
              K    +NA+++G+ +        V+ +F +    G  PD +++  +LS
Sbjct: 553 IVMKNLVSWNAMMAGYAQN--GQGRKVIEIFEKMLNIGNVPDQISYVSVLS 601


>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/587 (31%), Positives = 307/587 (52%), Gaps = 4/587 (0%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAEN 215
            ++++ + ++E    +   + G   HA  +K+       F+   L++MY        A+ 
Sbjct: 4   LSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKL 63

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +      + V     +I    + G    A   F  +LS    PND+TF  V+        
Sbjct: 64  ILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRM 123

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
              GKQLH LAVK G++ ++ VG ++  MY K G   +A ++FD +  RNL +W A IS 
Sbjct: 124 DTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISN 183

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
            V  G    ++  F+E L +G   DS      ++ CS    L  G QLHGF I+ GY  +
Sbjct: 184 SVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQN 243

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           V +   L+D Y K G+++ + M+ D    + +  ++++++ +++   ++EE    LF + 
Sbjct: 244 VSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQN--NEEEKASCLFLRA 301

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           R   +EP     S +L   A  + +  GRS+ A ++K     ++ V +AL+ MY KCGSI
Sbjct: 302 RKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSI 361

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE-GFAPDDISILGVLQA 574
           D A Q F  + +R++VSWNA+L  YA  G    A+ L EEM    G  P  +S++  L A
Sbjct: 362 DNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSA 421

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C  +G  + G+ +F  +++ YG+ P  EH+AC+VDLLGRAG +  A + I   PF  +  
Sbjct: 422 CSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTIS 481

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           +W  L+   ++    +   LA+++L +L+PKD+G+ +++SNM+A  G  +E   VR  M 
Sbjct: 482 IWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMK 541

Query: 695 DLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           ++ + K AG SWI +DS++H F A  K H +  EI   L  L  EM+
Sbjct: 542 EVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPEIQDILGKLRKEMQ 588



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 250/504 (49%), Gaps = 10/504 (1%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           N    +V++++      LG+A HA +LK+  +    F  N+L+N+YAK + L+ A+ + +
Sbjct: 7   NSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILE 66

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
               RS +TWT+LI G + +G + S L    DM     + N+ T   +L+A + L     
Sbjct: 67  LAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTT 126

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+HA A+K G  N+VFVG S+  MY   G   +A  VF  + ++++   N  I     
Sbjct: 127 GKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVL 186

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E +   F+ LL    +P+  TF   ++ C + LG+  G QLHG  ++ G  + +SV
Sbjct: 187 HGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSV 246

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N ++  YGK G  E +E +FD + ERN +SW++LI+ YV++    KA   FL      I
Sbjct: 247 SNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDI 306

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
                 +++V+  C+  S +E G  +   A+K     ++ + +ALVD+Y K G + +A  
Sbjct: 307 EPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQ 366

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
             +    +    +NA+L G+  +     + V +L      AG+ P  V+    LS  +  
Sbjct: 367 AFNAMPERNLVSWNALLGGYAHQ-GHANKAVALLEEMTSAAGIVPSYVSLICALSACSRA 425

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WN 534
             L  G  +   S+K  Y  +    +   L+ +  + G ++ A+   K +     +S W 
Sbjct: 426 GDLKTGMKIFE-SMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWG 484

Query: 535 AMLSAYALHG---LGK-GALLLFE 554
           A+L A  +HG   LGK  A  LFE
Sbjct: 485 ALLGACRMHGKPELGKLAAEKLFE 508


>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 698

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 205/676 (30%), Positives = 346/676 (51%), Gaps = 13/676 (1%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNR-LDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           HA LLKSG  + T   N L+  Y+  +  L  A++LFD +    A +W SL+  ++  G 
Sbjct: 23  HATLLKSGVTSPT-PWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGA 81

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
           + +   +   M+      N       L + + +     G Q+H+ A+K+G  +NVF  T+
Sbjct: 82  HPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATA 141

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ MY   G  R+A  +F G+  ++    N ++  Y ++G+   A  +FV +    F P+
Sbjct: 142 LLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPD 201

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
           + TF  +++V  ++       QLHG  VK+G    + V NA +T Y + G    + R+FD
Sbjct: 202 EATFAALLTVVNDSTCFLM-HQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFD 260

Query: 320 AISER-NLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNL 377
            I +R +LISW A++  Y   G   +A+  F   +   G+  D     ++I  C+   + 
Sbjct: 261 EIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD- 319

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD---LKSARMLLDGFSCKYTAEFNAIL 434
             G  +HG   K+G+     +  AL+ +Y +  +   ++ A    D    K T  +N++L
Sbjct: 320 HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSML 379

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G+ +       D +  F   +   +  D   FS  L   +  A L  GR +H   I++G
Sbjct: 380 TGYSQH--GLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSG 437

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           +A++  V ++LI MY+K G +D A + F+       V WN+M+  YA HG  +    LF 
Sbjct: 438 FASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFN 497

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           +M       D I+ +G++ AC ++GL + G  + N +E  YG+   +EH+AC +DL GRA
Sbjct: 498 QMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRA 557

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G+L +A  LI+S PF    ++W TL+   ++  N + +   +  LL+ EP+   +++L+S
Sbjct: 558 GQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYVLLS 617

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           NMY+G GM  + A V+  M +  LSK  G SWIE+ +++H F A    HP  +EIY  L 
Sbjct: 618 NMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSHPRMDEIYEMLS 677

Query: 735 LL--NDEMKLKVKDSS 748
           LL  N  M+L  +++S
Sbjct: 678 LLLHNFPMQLLHQETS 693



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 256/565 (45%), Gaps = 60/565 (10%)

Query: 33  SPNPKSQVAYLCSISSVSCSERTLLFNDWPQL----------VKISIGS----------- 71
           SP P +Q+    S+SS   +    LF++ P+L            +SIG+           
Sbjct: 33  SPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAM 92

Query: 72  ----------------------GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL 109
                                 G   LG  +H+  +K+G  ++ F A  L+++YAK  R 
Sbjct: 93  HERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRT 152

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
             A +LFDGM  R+ ++W +L+ GY++ G     + +  +M R     +E T + +L   
Sbjct: 153 RDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALL--- 209

Query: 170 SLLEDR--IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVR 226
           +++ D       Q+H   +K G    + V  + I+ Y   G    +  +F  +  + D+ 
Sbjct: 210 TVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLI 269

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
             N M+  Y   G    A   F  ++ +S  +P+ Y+FT++IS C E+     G  +HGL
Sbjct: 270 SWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD-HGGTVIHGL 328

Query: 286 AVKFGVVREISVGNAIVTMYGKHG---MSEEAERMFDAISERNLISWTALISGYVRSGHG 342
             K G      V NA++ MY +     M E+A + FD++  ++ +SW ++++GY + G  
Sbjct: 329 VSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLS 388

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
             A+  F       I  D    +  +  CS  + L LG Q+HG  I+ G+ S+  + ++L
Sbjct: 389 ADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSL 448

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           + +Y+K G L  A    +      +  +N+++ G+ +      + V  LF+Q     +  
Sbjct: 449 IFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQH--GKAQAVRSLFNQMLELKVPL 506

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL--ITMYAKCGSIDGAFQ 520
           D +TF  L++ + S A LV   S    ++++ Y   + + +    I +Y + G +D A +
Sbjct: 507 DHITFVGLIT-ACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKE 565

Query: 521 IFKGIS-DRDIVSWNAMLSAYALHG 544
           +   +  + D + W  +L A  +HG
Sbjct: 566 LIDSMPFEPDAMVWMTLLGACRVHG 590



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG+ +H  +++SG  ++ F +++LI +Y+K   LD A K F+     S++ W S++ G
Sbjct: 423 LRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFG 482

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGF 190
           Y   G  ++V  +   M   +   +  T   ++ ACS   L+++    E ++    + G 
Sbjct: 483 YAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEG--SEILNTMESRYGI 540

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA-GESEMAFHVFV 249
              +      I +Y  +G   +A+ +   + ++    V   +L   +  G  E+A  V  
Sbjct: 541 PLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVAS 600

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGV 276
           HLL +  EP  ++   ++S  Y  LG+
Sbjct: 601 HLLEA--EPRQHSTYVLLSNMYSGLGM 625


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/608 (30%), Positives = 316/608 (51%), Gaps = 43/608 (7%)

Query: 160 HTCSVILEACSLLED-RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF---REAEN 215
           H    +L  C  L+  RI    IHA  IK+G  N  +  + L+     S  F     A +
Sbjct: 3   HPSLSLLHNCKTLQSLRI----IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAIS 58

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +   ++   N M   +  + +   A  ++V ++S    PN YTF  ++  C +   
Sbjct: 59  VFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKV 118

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS------------------------ 311
            +EG+Q+HG  +K G   ++ V  ++++MY K+G                          
Sbjct: 119 SKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITG 178

Query: 312 -------EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
                  E A++MFD I  ++++SW A+ISGY  +G+  +A++ F E +   +  D S +
Sbjct: 179 YASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTM 238

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
            TV+  C+   +++LG Q+H +   HG  S++++  AL+D+Y+K G++++A  L  G S 
Sbjct: 239 VTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSN 298

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   A    +  GR
Sbjct: 299 KDVISWNTMIGGYTH--LNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGR 356

Query: 485 SLHAYSIK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
            +H Y  K   G      +  +LI MYAKCG I+ A Q+F  +  R + + NAM+  +A+
Sbjct: 357 WIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAM 416

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG    A  +F  M++ G  PDDI+ +G+L AC +SG+ + G  +F  + Q Y + P LE
Sbjct: 417 HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLE 476

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ CM+DLLG  G   EA  +IN+       ++W +L+   K+  N +     +++L+ +
Sbjct: 477 HYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKI 536

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EP++ GS++L+SN+YA  G  +E A +R  +ND  + K  GCS IEIDS +H F+   K 
Sbjct: 537 EPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF 596

Query: 723 HPESEEIY 730
           HP + EIY
Sbjct: 597 HPRNREIY 604



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 241/507 (47%), Gaps = 44/507 (8%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLIN---LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + +HA ++K+G  N  +  + L+    L   F+ L  A  +F+ +   + + W ++ +G+
Sbjct: 19  RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
               D  S + +   M       N +T   +L++C+ L+    G+QIH   +K G+E ++
Sbjct: 79  ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAY-------------------------------K 223
           +V TSLISMY  +G +++A  VF G ++                               K
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV   N +I  Y   G ++ A  +F  ++ ++ +P++ T   V+S C ++  ++ G+Q+H
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
                 G+   + + NA++ +Y K G  E A  +F  +S +++ISW  +I GY       
Sbjct: 259 SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYK 318

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTA 401
           +A+  F E L  G   +   + +++  C+    ++ G  +H +  K   G  +   L T+
Sbjct: 319 EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTS 378

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGM 460
           L+D+YAK GD+++A  + +    +  +  NA++ GF M   A+   D+   FS+ R  G+
Sbjct: 379 LIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDI---FSRMRKNGI 435

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGA 518
           EPD +TF  LLS  +    L  GR +   S+   Y     + +   +I +    G    A
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRRIFR-SMTQNYKITPKLEHYGCMIDLLGHLGLFKEA 494

Query: 519 FQIFKGIS-DRDIVSWNAMLSAYALHG 544
            ++   ++ + D V W ++L A  +HG
Sbjct: 495 EEMINTMTMEPDGVIWCSLLKACKMHG 521



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 172/390 (44%), Gaps = 42/390 (10%)

Query: 30  NTFSPNPKSQVA-YLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLK 86
           +  S +P S +  Y+C IS        LL N +  P L+K        K GQ +H  +LK
Sbjct: 78  HALSSDPVSAIKLYVCMIS------LGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLK 131

Query: 87  SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL---------------- 130
            G + D +   +LI++Y K  R   A K+FDG   R  +++T+L                
Sbjct: 132 LGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKM 191

Query: 131 ---------------IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
                          I GY D G+ +  L +  +M ++  K +E T   ++ AC+     
Sbjct: 192 FDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSI 251

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G Q+H++    G  +N+ +  +LI +Y   G    A  +F+GL+ KDV   N MI  Y
Sbjct: 252 QLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGY 311

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
                 + A  +F  +L S   PND T  +++  C +   ++ G+ +H    K   GV  
Sbjct: 312 THLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTN 371

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             S+  +++ MY K G  E A ++F+++  R L +  A+I G+   G    A + F    
Sbjct: 372 ASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMR 431

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQL 383
             GI  D      ++  CS    L+LG ++
Sbjct: 432 KNGIEPDDITFVGLLSACSHSGMLDLGRRI 461



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 4/269 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG ++LG+ VH+++   G  ++    N LI+LY+K   ++ A  LF G+  +  I+W ++
Sbjct: 248 SGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTM 307

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK--S 188
           I GY     Y+  L +  +M RS E  N+ T   IL AC+ L    FG  IH +  K   
Sbjct: 308 IGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIK 367

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  N   + TSLI MY   G    A  VF  + ++ +   N MI  +   G +  AF +F
Sbjct: 368 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIF 427

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGK 307
             +  +  EP+D TF  ++S C  +  ++ G+++   +   + +  ++     ++ + G 
Sbjct: 428 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGH 487

Query: 308 HGMSEEAERMFDAIS-ERNLISWTALISG 335
            G+ +EAE M + ++ E + + W +L+  
Sbjct: 488 LGLFKEAEEMINTMTMEPDGVIWCSLLKA 516


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 188/639 (29%), Positives = 323/639 (50%), Gaps = 45/639 (7%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+  H   +K G   + F  N L+ +Y K   +  A +LFD M   + +++T+++ G   
Sbjct: 161 GRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQ 220

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACS--------LLEDRIFGEQIHAFAIKS 188
            G  +  L +   M RS  + +    S +L AC+        +       + IHA  ++ 
Sbjct: 221 SGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRK 280

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF+++  VG SLI MY       EA  VF  ++   +   N ++  Y + G  E A  V 
Sbjct: 281 GFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVL 340

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +  S FEPN+ T++N+++ C +                    R++             
Sbjct: 341 DLMQESGFEPNEVTYSNMLASCIK-------------------ARDV------------- 368

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
                A  MFD IS+ ++ +W  L+SGY +       I  F       +  D + LA ++
Sbjct: 369 ---PSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVIL 425

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS    LELG Q+H  ++K    +D+ + + L+D+Y+K G +  A+++ +  + +   
Sbjct: 426 STCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVV 485

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N+++SG    I    E+    F Q R  GM P   +++ +++  A  + + +GR +HA
Sbjct: 486 CWNSMISGL--AIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHA 543

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             +K GY  +V VG++LI MYAKCG++D A   F  +  ++IV+WN M+  YA +G G+ 
Sbjct: 544 QVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEK 603

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A+ LFE M      PD ++ + VL  C +SGL +  I  FN +E  YG+RP++EH+ C++
Sbjct: 604 AVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLI 663

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           D LGRAGR +E + +I+  P+ +  +LW  L++   +  N++    A+K L  L+PK+  
Sbjct: 664 DALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPS 723

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
            ++L+SN+YA  G   +A+ VR  M+   + K  G SW+
Sbjct: 724 PYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWV 762



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 233/510 (45%), Gaps = 55/510 (10%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
            A+ AF  ++  + + +  N  I+   +   L  A+ L   M  R+A++W ++I      
Sbjct: 63  HALRAF--RALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVA-- 118

Query: 138 GDYESVLGIACDMYRS--EEKF--NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
                  G A +MYR   +E       T + +L AC  +     G + H  A+K G + N
Sbjct: 119 --RSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGN 176

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            FV   L+ MY   G   +A  +F  ++  +      M+    ++G  + A  +F  +  
Sbjct: 177 QFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSR 236

Query: 254 SDFEPNDYTFTNVISVCYENL--------GVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           S    +    ++V+  C +           +   + +H L V+ G   +  VGN+++ MY
Sbjct: 237 SAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMY 296

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K    +EA ++F+++S  +++SW  L++GY + G   +A    LE LDL          
Sbjct: 297 AKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERA----LEVLDL---------- 342

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
                          +Q  GF       S++ L + +     K  D+ SAR + D  S  
Sbjct: 343 ---------------MQESGFEPNEVTYSNM-LASCI-----KARDVPSARAMFDKISKP 381

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N +LSG+ ++  +  +D + LF + +   ++PD  T + +LS  +    L  G+ 
Sbjct: 382 SVTTWNTLLSGYGQE--ELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQ 439

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +H+ S+K     D+ V + LI MY+KCG +  A  IF  +++RD+V WN+M+S  A+H L
Sbjct: 440 VHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSL 499

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQAC 575
            + A   F++M+  G  P + S   ++ +C
Sbjct: 500 NEEAFDFFKQMRENGMFPTESSYASMINSC 529



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 222/474 (46%), Gaps = 43/474 (9%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++L Q++HA +++ G  +D    N+LI++YAK  ++D A K+F+ M   S ++W  L+ G
Sbjct: 267 IRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTG 326

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G YE                        LE   L+++             SGFE N
Sbjct: 327 YGQLGCYERA----------------------LEVLDLMQE-------------SGFEPN 351

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
               +++++    +     A  +F  ++   V   N ++  Y +    +    +F  +  
Sbjct: 352 EVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQH 411

Query: 254 SDFEPNDYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            + +P+  T   ++S C   LG+ E GKQ+H  +VK  +  ++ V + ++ MY K G   
Sbjct: 412 QNVQPDRTTLAVILSTC-SRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVG 470

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A+ +F+ ++ER+++ W ++ISG        +A + F +  + G+    S  A++I+ C+
Sbjct: 471 IAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCA 530

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             S++  G Q+H   +K GY  +V +G++L+D+YAK G++  AR+  +    K    +N 
Sbjct: 531 RLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNE 590

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++ G+ +      E  + LF        +PD VTF  +L+   S + LV     +  S++
Sbjct: 591 MIHGYAQN--GFGEKAVELFEYMLTTKQKPDSVTFIAVLT-GCSHSGLVDEAIAYFNSME 647

Query: 493 TGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
           + Y    +V +   LI    + G       +   +  + D + W  +L+A  +H
Sbjct: 648 SNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVH 701



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 152/304 (50%), Gaps = 12/304 (3%)

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA ++   + G    A  +   + +RN +SW  +I+   RS   G+A+  +   L  G+ 
Sbjct: 80  NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLA 139

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
             +  LA+V+  C   + L+ G + HG A+K G   +  +   L+ +Y K G +  A  L
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRL 199

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D  S      F A++ G  +  A D  D + LF++   + +  DPV  S +L   A QA
Sbjct: 200 FDWMSSPNEVSFTAMMGGLAQSGAVD--DALRLFARMSRSAIRVDPVAVSSVLGACA-QA 256

Query: 479 C---------LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           C         +   +S+HA  ++ G+ +D  VGN+LI MYAK   +D A ++F+ +S   
Sbjct: 257 CAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVS 316

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           IVSWN +++ Y   G  + AL + + M+  GF P++++   +L +CI +        +F+
Sbjct: 317 IVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFD 376

Query: 590 EIEQ 593
           +I +
Sbjct: 377 KISK 380



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 175/382 (45%), Gaps = 8/382 (2%)

Query: 45  SISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYA 104
           S+SSVS     +L   + QL       G  +    V   + +SG + +    +N++    
Sbjct: 311 SMSSVSIVSWNILVTGYGQL-------GCYERALEVLDLMQESGFEPNEVTYSNMLASCI 363

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           K   +  A+ +FD +   S  TW +L+ GY  +  ++  + +   M     + +  T +V
Sbjct: 364 KARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAV 423

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           IL  CS L     G+Q+H+ ++K    N++FV + LI MY   G    A+ +F  +  +D
Sbjct: 424 ILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERD 483

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V C N MI        +E AF  F  +  +   P + ++ ++I+ C     + +G+Q+H 
Sbjct: 484 VVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHA 543

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
             +K G  + + VG++++ MY K G  ++A   F+ +  +N+++W  +I GY ++G G K
Sbjct: 544 QVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEK 603

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALV 403
           A+  F   L      DS     V+ GCS    ++  +   +     +G    V   T L+
Sbjct: 604 AVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLI 663

Query: 404 DIYAKGGDLKSARMLLDGFSCK 425
           D   + G       ++D    K
Sbjct: 664 DALGRAGRFAEVVAVIDKMPYK 685



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 183/416 (43%), Gaps = 46/416 (11%)

Query: 178 GEQIHAF-AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           G   HA  A ++    NV+   + IS    +G    A ++   +  ++    N +I    
Sbjct: 59  GLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVA 118

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           ++     A  ++  +L     P ++T  +V+S C     +++G++ HGLAVK G+     
Sbjct: 119 RSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQF 178

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V N ++ MY K G   +A R+FD +S  N +S+TA++ G  +SG    A+  F       
Sbjct: 179 VENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSA 238

Query: 357 ICCDSSCLATVIDGCS--------VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           I  D   +++V+  C+        V   + L   +H   ++ G+ SD  +G +L+D+YAK
Sbjct: 239 IRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAK 298

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
           G  +  A  + +  S      +N +++G+  ++   E  + VL   Q  +G EP+ VT+S
Sbjct: 299 GMKMDEAMKVFESMSSVSIVSWNILVTGY-GQLGCYERALEVLDLMQE-SGFEPNEVTYS 356

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L+     +C+                              K   +  A  +F  IS  
Sbjct: 357 NMLA-----SCI------------------------------KARDVPSARAMFDKISKP 381

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
            + +WN +LS Y    L +  + LF  M+ +   PD  ++  +L  C   G+ E G
Sbjct: 382 SVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELG 437



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 10/249 (4%)

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            A +    + GDL +AR LL     +    +N +++      +D   + + ++      G
Sbjct: 80  NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVAR--SDSPGEALEMYRGMLQEG 137

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           + P   T + +LS   + A L  GR  H  ++K G   +  V N L+ MY KCGS+  A 
Sbjct: 138 LAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAV 197

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           ++F  +S  + VS+ AM+   A  G    AL LF  M R     D +++  VL AC  + 
Sbjct: 198 RLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQAC 257

Query: 580 LSEGGICLFNEIEQIYGLRPILEHF-------ACMVDLLGRAGRLSEAMNLINSSPFSES 632
             +  +     + Q      + + F         ++D+  +  ++ EAM +  S   S S
Sbjct: 258 AGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMS-SVS 316

Query: 633 PLLWRTLVS 641
            + W  LV+
Sbjct: 317 IVSWNILVT 325


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 204/718 (28%), Positives = 365/718 (50%), Gaps = 29/718 (4%)

Query: 45  SISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYA 104
           S   V C   T     +  ++K    + +L +G+AVHA  L+          N+L+N+Y+
Sbjct: 88  SSPQVKCDSYT-----YSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYS 142

Query: 105 K-------------FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
                         ++R D+ +K+FD M  R+ + W +LI  Y+    Y   +     M 
Sbjct: 143 MCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMM 202

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE--NNVFVGTSLISMYFHSGC 209
           +   K +  +   +  A S L D      +H   +K G E  N+++V +S I MY   GC
Sbjct: 203 KIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGC 262

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVIS 268
              A+ VF     ++    N MI  + +   S     +F   + S D   ++ T  + IS
Sbjct: 263 LEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAIS 322

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
                   E  +QLH   +K   V ++ V NA++ MY +    + + ++FD + E++++S
Sbjct: 323 AASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVS 382

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           W  +IS +V++G   +A+  F E     +  DS  +  ++   S   N ++G Q HG+ +
Sbjct: 383 WNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLL 442

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLD-GFSCKY-TAEFNAILSGFMEKIADDEE 446
           ++G   +  + + L+D+YAK G +++A+ + +  FS +   A +N+++SG+ +    D+ 
Sbjct: 443 RNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQ- 500

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
              ++  Q     + P+ VT + +L        +  G+ LH +SI+     +V V  ALI
Sbjct: 501 -AFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALI 559

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MY+K GSI  A  +F   +++ IV+++ M+  Y  HG+G+ AL +F  M++ G  PD +
Sbjct: 560 DMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAV 619

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMN-LIN 625
           +++ VL AC Y+GL + G+ +F  +  +Y ++P  EHF C+ D+LGRAGR+ +A   +I 
Sbjct: 620 TLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIG 679

Query: 626 SSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD--AGSFILVSNMYAGQGML 683
                    +W +L++  ++    +   L +K+LL++E  +   G  +L+SN+YA +   
Sbjct: 680 LGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNW 739

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +    VR  M +  L KE G SWIEI   ++HF +  + HP+S++IYS L+ L  EMK
Sbjct: 740 ENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMK 797



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 156/629 (24%), Positives = 297/629 (47%), Gaps = 45/629 (7%)

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKFNEHTCSVI 165
           +L +A++LFD +   S + W ++I G + +   +  L    +M  S  + K + +T S +
Sbjct: 43  QLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSV 102

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY-----------FHSGCFR--E 212
           L+AC+   + + G+ +HA  ++     +  V  SL++MY             SG  R   
Sbjct: 103 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 162

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
              VF  +  + V   N +I  Y +      A   F  ++    +P+  +F NV    + 
Sbjct: 163 VRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFP-AFS 221

Query: 273 NLG-VEEGKQLHGLAVKFG--VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           +LG  +    +HG+ VK G   V ++ V ++ + MY + G  E A+++FD   ERN   W
Sbjct: 222 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 281

Query: 330 TALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
             +IS +V++    + I  F + ++      D   L + I   S     EL  QLH F I
Sbjct: 282 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 341

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           K+  ++ V +  AL+ +Y++   + ++  + D    K    +N ++S F++   +DE   
Sbjct: 342 KNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDE--A 399

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
           ++LF + +   +  D VT + LLS ++       G+  H Y ++ G   + +  + LI M
Sbjct: 400 LMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM-DSYLIDM 458

Query: 509 YAKCGSIDGAFQIF-KGIS-DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
           YAK G I+ A  +F K  S +RD  +WN+M+S Y  +GL   A L+  +M  +   P+ +
Sbjct: 459 YAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVV 518

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYG--LRPILEH----FACMVDLLGRAGRLSEA 620
           ++  +L AC  SG  + G       +Q++G  +R  L+        ++D+  ++G ++ A
Sbjct: 519 TLASILPACNPSGYIDWG-------KQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHA 571

Query: 621 MNLINSSPFSESPLLWRTLV--SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
            N+  S    +S + + T++       M  S   +    +   ++P DA + + V +  +
Sbjct: 572 ENVF-SKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQP-DAVTLVAVLSACS 629

Query: 679 GQGMLDEAAKVRTTMN---DLRLSKEAGC 704
             G++DE  ++  +M    +++ S E  C
Sbjct: 630 YAGLVDEGLQIFESMRTVYNIQPSTEHFC 658



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 130/286 (45%), Gaps = 20/286 (6%)

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEFLDLGICCDSSCL 364
           + G    A ++FDA+   + + W  +I G V +    +A+  +  ++     + CDS   
Sbjct: 40  QEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTY 99

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA------KGGDLKS---- 414
           ++V+  C+   NL +G  +H   ++        +  +L+++Y+        G + S    
Sbjct: 100 SSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 159

Query: 415 ---ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
               R + D    +    +N +++ ++    +   + +  FS     G++P PV+F  + 
Sbjct: 160 CDLVRKVFDTMRKRTVVAWNTLIAWYVR--TERYAEAVKQFSMMMKIGIKPSPVSFVNVF 217

Query: 472 SLSASQACLVRGRSLHAYSIKTG--YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
              +S         +H   +K G  Y  D+ V ++ I MYA+ G ++ A ++F    +R+
Sbjct: 218 PAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERN 277

Query: 530 IVSWNAMLSAYALHGLG-KGALLLFEEMKREGFAPDDISILGVLQA 574
              WN M+SA+  +    +G  L F+ ++ E  A D++++L  + A
Sbjct: 278 TEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISA 323


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/570 (32%), Positives = 313/570 (54%), Gaps = 7/570 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +QIHA  I SG  +N F+  SL++ Y + G   +A+ +F    YK+V     +I    K 
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISV 297
                A  VF  ++  +F+PN  T ++V+   + NLG +   K +H   V+ G    + V
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPA-FANLGLIRIAKSVHCFWVRGGFEGNVFV 159

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             A+V MY K G    A ++F+++SERN+++W A++SGY   G   +AI+ F      G+
Sbjct: 160 ETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGL 219

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   + ++I        L++G  +HGF I+ GY +D  + TAL+DIY     +  A  
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +    S K  A +  +L+GF      D   +        +  ++ D +    +LS  +  
Sbjct: 280 VFSEMSVKDVAAWTLMLTGFSSGRHWDRA-IKHFNKMLGIQNLKLDSIALMGILSSCSHS 338

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L +GR +HA +IKT +A ++ VG+A+I MYA CG+++ A + F G+ ++D+V WNAM+
Sbjct: 339 GALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMI 398

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +   ++G G  A+ LF +MK  G  PD+ + + VL AC ++G+   G+ +F  + +   +
Sbjct: 399 AGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHV 458

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P L+H+AC++D+LGRAG+L  A + IN+ PF     ++ TL+   ++  N K     S+
Sbjct: 459 IPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQ 518

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           ++ ++EP DAG ++L+SNMYA  G  +     R ++   R+ K+ G S IEI+ +++ F+
Sbjct: 519 KIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFM 578

Query: 718 ASGKDHPESEEIYSKLDLLNDEMKLKVKDS 747
           A  KDHP+    Y K++ +   + LK+K +
Sbjct: 579 AGEKDHPQ----YFKIEGILKGLILKIKKA 604



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 236/475 (49%), Gaps = 5/475 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DLK  Q +HA ++ SG  ++TF +N+L+N Y     L  A+++F     ++ ++WT LI 
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILIS 95

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G   +  +   + +  +M     K N  T S +L A + L      + +H F ++ GFE 
Sbjct: 96  GLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVFV T+L+ MY   GC   A  +F  ++ ++V   N ++  Y+  G SE A  +F  + 
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                 + YT  ++I        ++ G  +HG  ++ G   +  +  A++ +Y  H   +
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGC 371
           +A R+F  +S +++ +WT +++G+    H  +AI  F + L +  +  DS  L  ++  C
Sbjct: 276 DAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSC 335

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S    L+ G ++H  AIK  + +++ +G+A++D+YA  G+L+ A+    G   K    +N
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWN 395

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+++G    +     D + LF Q + +G++PD  TF  +L   +    +  G  +  + +
Sbjct: 396 AMIAG--NGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453

Query: 492 KTGYAADVIVGNA-LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           KT +    +   A +I +  + G +D A+     +    D   ++ +L A  +HG
Sbjct: 454 KTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 214/437 (48%), Gaps = 11/437 (2%)

Query: 44  CSISSVSCSERTLLFNDWPQLVKIS------IGSGDLKLGQAVHAFLLKSGSQNDTFEAN 97
           C + ++      ++ N  P  V IS         G +++ ++VH F ++ G + + F   
Sbjct: 102 CFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 98  NLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF 157
            L+++Y+KF  + VA++LF+ M  R+ +TW +++ GY D G  E  + +   M R     
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           + +T   ++ A   +     G  IH F I++G+EN+  + T+L+ +Y    C  +A  VF
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVF 281

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGV 276
             ++ KDV     M+  ++     + A   F  +L   + + +      ++S C  +  +
Sbjct: 282 SEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGAL 341

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
           ++G+++H LA+K      I VG+A++ MY   G  E+A+R F  + E++++ W A+I+G 
Sbjct: 342 QQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGN 401

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSD 395
             +G+G  AI+ FL+    G+  D S   +V+  CS    +  GLQ+    +K  + + +
Sbjct: 402 GMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPN 461

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           ++    ++DI  + G L +A   ++    +   +  + L G      + +    +    Q
Sbjct: 462 LQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEI---SQ 518

Query: 456 RLAGMEPDPVTFSRLLS 472
           ++  MEP+   +  LLS
Sbjct: 519 KIFEMEPNDAGYYVLLS 535


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 189/706 (26%), Positives = 347/706 (49%), Gaps = 63/706 (8%)

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
           D A  + + +    A+ W  LI+ ++  G  +S + ++C M R+  + +  T   +L+AC
Sbjct: 68  DYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKAC 127

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK---DVR 226
             L     G   H     +GFE+NVF+  +L++MY   G   EA  +F  +  +   DV 
Sbjct: 128 GELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 187

Query: 227 CVNFMILEYNKAGESEMAFHVF------VHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             N ++  + K+  +  A  +F      VH   ++   +  +  N++  C     V + K
Sbjct: 188 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTK 247

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++HG A++ G   ++ VGNA++  Y K G+ E A ++F+ +  ++++SW A+++GY +SG
Sbjct: 248 EVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSG 307

Query: 341 H-----------------------------------GGKAINGFLEFLDLGICCDSSCLA 365
           +                                     +A+N F + +  G   +   + 
Sbjct: 308 NFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTII 367

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLS----------DVRLGTALVDIYAKGGDLKSA 415
           +V+  C+       G+++H +++K+  L+          D+ +  AL+D+Y+K    K+A
Sbjct: 368 SVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 427

Query: 416 RMLLDGFSC--KYTAEFNAILSGFMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLL 471
           R + D      +    +  ++ G  +    D  D + LF +      G+ P+  T S +L
Sbjct: 428 RSIFDDIPLEERNVVTWTVMIGGHAQY--GDSNDALKLFVEMISEPYGVAPNAYTISCIL 485

Query: 472 SLSASQACLVRGRSLHAYSIKTGY--AADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
              A  A +  G+ +HAY ++     ++   V N LI MY+KCG +D A  +F  +S + 
Sbjct: 486 MACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKS 545

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
            +SW +M++ Y +HG G  AL +F++M++ GF PDDI+ L VL AC + G+ + G+  F+
Sbjct: 546 AISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFD 605

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            +   YGL P  EH+A  +DLL R GRL +A   +   P   + ++W  L+S  ++ +N 
Sbjct: 606 SMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNV 665

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           + +  A  +L+++  ++ GS+ L+SN+YA  G   + A++R  M    + K  GCSW++ 
Sbjct: 666 ELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQG 725

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
                 F    + HP S +IY+ L+ L D +K +     + F L D
Sbjct: 726 QKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHD 771



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 254/566 (44%), Gaps = 73/566 (12%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K        + G A H  +  +G +++ F  N L+ +Y++   L+ A  +FD +  
Sbjct: 121 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 180

Query: 122 R---SAITWTSLIKGYLDDGDYESVLGIACDM--YRSEEKFNEHTCSV----ILEACSLL 172
           R     I+W S++  ++   +  + L +   M     E+  NE +  +    IL AC  L
Sbjct: 181 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 240

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
           +     +++H  AI++G   +VFVG +LI  Y   G    A  VF  + +KDV   N M+
Sbjct: 241 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 300

Query: 233 LEYNKAGESEMAF-----------------------------------HVFVHLLSSDFE 257
             Y+++G  + AF                                   +VF  ++ S   
Sbjct: 301 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 360

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVK---------FGVVRE-ISVGNAIVTMYGK 307
           PN  T  +V+S C       +G ++H  ++K         FG   E + V NA++ MY K
Sbjct: 361 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 420

Query: 308 HGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAINGFLEFLD--LGICCDSSC 363
               + A  +FD I   ERN+++WT +I G+ + G    A+  F+E +    G+  ++  
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 480

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYL--SDVRLGTALVDIYAKGGDLKSARMLLDG 421
           ++ ++  C+  + + +G Q+H + ++H     S   +   L+++Y+K GD+ +AR + D 
Sbjct: 481 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 540

Query: 422 FSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            S K    + ++++G+ M     +  D+   F + R AG  PD +TF  L+ L A   C 
Sbjct: 541 MSQKSAISWTSMMTGYGMHGRGSEALDI---FDKMRKAGFVPDDITF--LVVLYACSHCG 595

Query: 481 VRGRSLHAY---SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAM 536
           +  + L  +   S   G           I + A+ G +D A++  K +  +   V W A+
Sbjct: 596 MVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVAL 655

Query: 537 LSAYALHG---LGKGALLLFEEMKRE 559
           LSA  +H    L + AL    EM  E
Sbjct: 656 LSACRVHSNVELAEHALNKLVEMNAE 681



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 7/303 (2%)

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           S+G  +V  Y   G ++ A  + + ++    + W  LI  +++ G    AIN     L  
Sbjct: 52  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 111

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   D   L  V+  C    +   G   HG    +G+ S+V +  ALV +Y++ G L+ A
Sbjct: 112 GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 171

Query: 416 RMLLDGFSCKYTAE---FNAILSGFMEK----IADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            M+ D  + +   +   +N+I+S  ++      A D    M L   ++      D ++  
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 231

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +L    S   + + + +H  +I+ G   DV VGNALI  YAKCG ++ A ++F  +  +
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 291

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D+VSWNAM++ Y+  G  K A  LF+ M++E    D ++   V+      G S   + +F
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351

Query: 589 NEI 591
            ++
Sbjct: 352 RQM 354



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 190/427 (44%), Gaps = 63/427 (14%)

Query: 52  SERTLLFNDWP--------QLVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLI 100
           S+ TL+ ++ P         +V I    G LK     + VH   +++G+  D F  N LI
Sbjct: 210 SKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALI 269

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE------ 154
           + YAK   ++ A K+F+ M  +  ++W +++ GY   G++++   +  +M +        
Sbjct: 270 DAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMV 329

Query: 155 ------EKFNEHTCS-----------------------VILEACSLLEDRIFGEQIHAFA 185
                   +++  CS                        +L AC+ L     G +IHA++
Sbjct: 330 TWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYS 389

Query: 186 IKS----------GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF--MIL 233
           +K+          G + ++ V  +LI MY     F+ A ++F  +  ++   V +  MI 
Sbjct: 390 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 449

Query: 234 EYNKAGESEMAFHVFVHLLSSDF--EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
            + + G+S  A  +FV ++S  +   PN YT + ++  C     +  GKQ+H   ++   
Sbjct: 450 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQ 509

Query: 292 VREIS--VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
               +  V N ++ MY K G  + A  +FD++S+++ ISWT++++GY   G G +A++ F
Sbjct: 510 YDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 569

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAK 408
            +    G   D      V+  CS C  ++ GL      +  +G           +D+ A+
Sbjct: 570 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLAR 629

Query: 409 GGDLKSA 415
            G L  A
Sbjct: 630 FGRLDKA 636


>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/587 (31%), Positives = 307/587 (52%), Gaps = 4/587 (0%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAEN 215
            ++++ + ++E    +   + G   HA  +K+       F+   L++MY        A+ 
Sbjct: 4   LSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKL 63

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +      + V     +I    + G    A   F  +LS    PND+TF  V+        
Sbjct: 64  ILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRM 123

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
              GKQLH LAVK G++ ++ VG ++  MY K G   +A ++FD +  RNL +W A IS 
Sbjct: 124 DTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISN 183

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
            V  G    ++  F+E L +G   DS      ++ CS    L  G QLHGF I+ GY  +
Sbjct: 184 SVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQN 243

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           V +   L+D Y K G+++ + M+ D    + +  ++++++ +++   ++EE    LF + 
Sbjct: 244 VSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQN--NEEEKASCLFLRA 301

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           R   +EP     S +L   A  + +  GRS+ A ++K     ++ V +AL+ MY KCGSI
Sbjct: 302 RKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSI 361

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE-GFAPDDISILGVLQA 574
           D A Q F  + +R++VSWNA+L  YA  G    A+ L EEM    G  P  +S++  L A
Sbjct: 362 DNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSA 421

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C  +G  + G+ +F  +++ YG+ P  EH+AC+VDLLGRAG +  A + I   PF  +  
Sbjct: 422 CSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTIS 481

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           +W  L+   ++    +   LA+++L +L+PKD+G+ +++SNM+A  G  +E   VR  M 
Sbjct: 482 IWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMK 541

Query: 695 DLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           ++ + K AG SWI +DS++H F A  K H +  EI   L  L  EM+
Sbjct: 542 EVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPEIQDILGKLRKEMQ 588



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 250/504 (49%), Gaps = 10/504 (1%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           N    +V++++      LG+A HA +LK+  +    F  N+L+N+YAK + L+ A+ + +
Sbjct: 7   NSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILE 66

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
               RS +TWT+LI G + +G + S L    DM     + N+ T   +L+A + L     
Sbjct: 67  LAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTT 126

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+HA A+K G  N+VFVG S+  MY   G   +A  VF  + ++++   N  I     
Sbjct: 127 GKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVL 186

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E +   F+ LL    +P+  TF   ++ C + LG+  G QLHG  ++ G  + +SV
Sbjct: 187 HGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSV 246

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N ++  YGK G  E +E +FD + ERN +SW++LI+ YV++    KA   FL      I
Sbjct: 247 SNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDI 306

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
                 +++V+  C+  S +E G  +   A+K     ++ + +ALVD+Y K G + +A  
Sbjct: 307 EPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQ 366

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
             +    +    +NA+L G+  +     + V +L      AG+ P  V+    LS  +  
Sbjct: 367 AFNAMPERNLVSWNALLGGYAHQ-GHANKAVALLEEMTSAAGIVPSYVSLICALSACSRA 425

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WN 534
             L  G  +   S+K  Y  +    +   L+ +  + G ++ A+   K +     +S W 
Sbjct: 426 GDLKTGMKIFE-SMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWG 484

Query: 535 AMLSAYALHG---LGK-GALLLFE 554
           A+L A  +HG   LGK  A  LFE
Sbjct: 485 ALLGACRMHGKPELGKLAAEKLFE 508


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 188/590 (31%), Positives = 322/590 (54%), Gaps = 15/590 (2%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIH--AFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + HT + + +AC+       G+ +H   F      + N+F+   +++MY   G    A  
Sbjct: 62  SHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQ 121

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F  +  K++     ++  Y + G S   F VF  +L    +P ++ F +VIS C  +  
Sbjct: 122 MFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWH-QPTEFAFASVISACGGDDN 180

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH-GMSEEAERMFDAISERNLISWTALIS 334
              G+Q+H LA+K      + VGNA++ MY K  G ++EA  +++A+  RNL+SW ++I+
Sbjct: 181 C--GRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIA 238

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG-CSVCSNLELGLQLHGFAIKHGYL 393
           G+   G G +A+  F +    GI  D + L ++    C +   LE   QL    IK G++
Sbjct: 239 GFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFI 298

Query: 394 SDVRLGTALVDIYAK-GGDLKSA-RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
             + + TALV  Y+  GG++    R+ L+    +    +  I++ F E+   D +  +V+
Sbjct: 299 LKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAER---DPKKALVI 355

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           F Q     + PD   FS +L   A  A      ++ ++ +K G+  D+++ NALI   A+
Sbjct: 356 FRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACAR 415

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           CGS+  + Q+F  +  RD VSWN+ML AYA+HG GK ALLLF +M  +   PD  + + +
Sbjct: 416 CGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDAQ---PDGATFVAL 472

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
           L AC ++G++E G  +F  +   +G+ P L+H+ACMVD+LGRAG++SEA  LI+  P   
Sbjct: 473 LSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEP 532

Query: 632 SPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
             ++W  L+   +    +K + LA+ +L +L+P ++  ++L+SN++   G  +EA  +R 
Sbjct: 533 DSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLIRR 592

Query: 692 TMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            M    + KE G SWIE+ +++H F + G+ HPE E I ++L+ L   +K
Sbjct: 593 EMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARLEELVRRLK 642



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 226/492 (45%), Gaps = 17/492 (3%)

Query: 74  LKLGQAVH--AFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           L  GQA+H   FL    S  + F  N+++N+YAK   LD A ++FD M  ++ ++WT+L+
Sbjct: 79  LPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALV 138

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY   G       +   M    +   E   + ++ AC    D   G Q+HA A+K+ F+
Sbjct: 139 SGYAQHGRSNECFRVFRGMLIWHQP-TEFAFASVISACG--GDDNCGRQVHALALKTSFD 195

Query: 192 NNVFVGTSLISMYFHS-GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + V+VG +LI MY  S G   EA NV+  + ++++   N MI  +   G    A  +F  
Sbjct: 196 SCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQ 255

Query: 251 LLSSDFEPNDYTFTNVIS-VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-H 308
           +       +  T  ++ S +C    G+E   QL  L +K G + +I V  A+V  Y    
Sbjct: 256 MHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLG 315

Query: 309 GMSEEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
           G   +  R+F  +  R +++SWT +I+ +       KA+  F +FL   +  D    + V
Sbjct: 316 GEVSDCYRIFLELDGRQDVVSWTGIIAAFAERD-PKKALVIFRQFLRECLAPDRHMFSIV 374

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C+  +     L +    +K G+  D+ L  AL+   A+ G +  ++ + D    + T
Sbjct: 375 LKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDT 434

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSL 486
             +N++L  +   +    ++ ++LFSQ      +PD  TF  LLS  +       G +  
Sbjct: 435 VSWNSMLKAY--AMHGQGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKIF 489

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGL 545
              S   G    +     ++ +  + G I  A ++   +  + D V W+A+L +   HG 
Sbjct: 490 ETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGE 549

Query: 546 GKGALLLFEEMK 557
            K A L   ++K
Sbjct: 550 TKLAKLAAVKLK 561



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 155/363 (42%), Gaps = 17/363 (4%)

Query: 67  ISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK-FNRLDVAQKLFDGMLVRSAI 125
           IS   GD   G+ VHA  LK+   +  +  N LI +Y K     D A  +++ M  R+ +
Sbjct: 172 ISACGGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLV 231

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA-CSLLEDRIFGEQIHAF 184
           +W S+I G+   G     L +   M+    +F+  T   I    C + +      Q+   
Sbjct: 232 SWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCL 291

Query: 185 AIKSGFENNVFVGTSLISMYFHSG-----CFREAENVFRGL-AYKDVRCVNFMILEYNKA 238
            IK+GF   + V T+L+  Y   G     C+R    +F  L   +DV     +I  + + 
Sbjct: 292 TIKTGFILKIEVATALVKAYSSLGGEVSDCYR----IFLELDGRQDVVSWTGIIAAFAER 347

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            + + A  +F   L     P+ + F+ V+  C           +    +K G   +I + 
Sbjct: 348 -DPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLA 406

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA++    + G    ++++FD +  R+ +SW +++  Y   G G +A+   L F  +   
Sbjct: 407 NALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEAL---LLFSQMDAQ 463

Query: 359 CDSSCLATVIDGCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
            D +    ++  CS     E G ++    +  HG +  +     +VDI  + G +  A+ 
Sbjct: 464 PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKE 523

Query: 418 LLD 420
           L+D
Sbjct: 524 LID 526



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G    +    V + +LK G ++D   AN LI+  A+   + +++++FD M  R 
Sbjct: 374 VLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRD 433

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
            ++W S++K Y   G  +  L +   M   + + +  T   +L ACS
Sbjct: 434 TVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSACS 477


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 1011

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 196/634 (30%), Positives = 332/634 (52%), Gaps = 66/634 (10%)

Query: 166 LEACSLLEDRIFGE-----QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           L++CSL    I         +HA ++K+G    +     L+++Y  S     A  +F  +
Sbjct: 291 LQSCSLFHSTISNGPPPLGTLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEI 350

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             ++ +    +I  +++AG SE+ F +F  + +    PN YT +++   C  ++ ++ GK
Sbjct: 351 PQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGK 410

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +H   ++ G+  ++ +GN+I+ +Y K  + E AER+F+ ++E +++SW  +IS Y+R+G
Sbjct: 411 GVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAG 470

Query: 341 HGGKAINGF--LEFLDLGICCDSSCLATVIDG---------------CSV-CSN------ 376
              K+++ F  L + D+          T++DG               C V C        
Sbjct: 471 DVEKSLDMFRRLPYKDV------VSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVT 524

Query: 377 -------------LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD--- 420
                        +ELG QLHG  +K G+  D  + ++LV++Y K G + +A ++L    
Sbjct: 525 FSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVP 584

Query: 421 ---------GFSCKY----TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
                    G +CK        +  ++SG++       ED +  F       +  D  T 
Sbjct: 585 LDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWN--GKYEDGLKTFRLMVRELVVVDIRTV 642

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           + ++S  A+   L  GR +HAY+ K G+  D  VG++LI MY+K GS+D A+ IF+  ++
Sbjct: 643 TTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNE 702

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
            +IV W +M+S  ALHG GK A+ LFEEM  +G  P++++ LGVL AC ++GL E G   
Sbjct: 703 PNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRY 762

Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           F  ++  Y + P +EH   MVDL GRAG L+E  N I  +  S    +W++ +S  +L  
Sbjct: 763 FRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHK 822

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           N +     S+ LL + P D G+++L+SNM A     DEAA+VR+ M+   + K+ G SWI
Sbjct: 823 NVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWI 882

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           ++  ++H F+   + HP+ EEIYS LD+L   +K
Sbjct: 883 QLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLK 916



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 237/540 (43%), Gaps = 65/540 (12%)

Query: 61  WPQ---LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           W Q   L   +I +G   LG  +HA  +K+GS      AN L+ LY K + +D A+KLFD
Sbjct: 290 WLQSCSLFHSTISNGPPPLG-TLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFD 348

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            +  R+  TWT LI G+   G  E V  +  +M       N++T S + + CSL  +   
Sbjct: 349 EIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQL 408

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+ +HA+ +++G + +V +G S++ +Y     F  AE VF  +   DV   N MI  Y +
Sbjct: 409 GKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLR 468

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE------------------- 278
           AG+ E +  +F  L   D    +     ++   YE   +E+                   
Sbjct: 469 AGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIA 528

Query: 279 ------------GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS---- 322
                       G+QLHG+ +KFG  R+  + +++V MY K G  + A  +   +     
Sbjct: 529 LILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFL 588

Query: 323 ------------ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
                       +  ++SW  ++SGYV +G     +  F   +   +  D   + T+I  
Sbjct: 589 KNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISA 648

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+    LE G  +H +  K G+  D  +G++L+D+Y+K G L  A  +    +      +
Sbjct: 649 CANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFW 708

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG----RSL 486
            +++SG    +    +  + LF +    G+ P+ VTF  +L+       L  G    R +
Sbjct: 709 TSMISGC--ALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMM 766

Query: 487 H-AYSIKTGYAADVIVGNALITMYAKCGSIDGA--FQIFKGISDRDIVSWNAMLSAYALH 543
             AY I  G    V    +++ +Y + G +     F    GIS    V W + LS+  LH
Sbjct: 767 KDAYCINPG----VEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSV-WKSFLSSCRLH 821


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 201/667 (30%), Positives = 338/667 (50%), Gaps = 18/667 (2%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKF--NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           HA LLKSG    T   N L+  Y++   + L  A+++FD +  R  ++W +L+      G
Sbjct: 14  HASLLKSGVAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASG 72

Query: 139 DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
            +     +   M+      N       L + ++      G Q+ + A+KSG  NNVF  +
Sbjct: 73  AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +L+ +Y   G  R+A  VF G+  ++    N +I  Y ++G+   A  +F+ +      P
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAP 192

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           ++ TF ++++   E        QLHG  VK+G    ++V NA +T Y + G  +++ R+F
Sbjct: 193 DEATFASLLTAV-EGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIF 251

Query: 319 DAISE-RNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSN 376
           D I + R+LISW A++  Y  +G   +A+  F+  + + G+  D     ++I  CS   +
Sbjct: 252 DGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGH 311

Query: 377 LE-LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC------KYTAE 429
            +  G  +HG  IK        +  AL+ +Y +        M+ D + C      K T  
Sbjct: 312 DDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR---YNENCMMEDAYKCFNSLVLKDTVS 368

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N++L+G+ +       D +  F       +  D   FS  L  S+  A L  G+ +H  
Sbjct: 369 WNSMLTGYSQH--GLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGL 426

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            I +G+A++  V ++LI MY+K G ID A + F+       V WNAM+  YA HG  +  
Sbjct: 427 VIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENV 486

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
            +LF EM +     D I+ +G++ +C ++GL + G  + N +E  YG+   +EH+AC VD
Sbjct: 487 DILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVD 546

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           L GRAG+L +A  LI+S PF    ++W TL+   ++  N + +   +  L   EP+   +
Sbjct: 547 LYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHST 606

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++L+S+MY+G GM  + A V+  M    LSK  G SWIE+ +++H F A  K HP+ +EI
Sbjct: 607 YVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEI 666

Query: 730 YSKLDLL 736
           Y  L +L
Sbjct: 667 YEMLRVL 673



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 247/485 (50%), Gaps = 27/485 (5%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +G  + +  LKSG  N+ F A+ L+++YAK  R+  A+++FDGM  R+ ++W +LI GY 
Sbjct: 111 IGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYT 170

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEA-----CSLLEDRIFGEQIHAFAIKSGF 190
           + GD  S L +  +M R     +E T + +L A     C L+       Q+H   +K G 
Sbjct: 171 ESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM------HQLHGKIVKYGS 224

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFHVFV 249
              + V  + I+ Y   G  +++  +F G+   +D+   N M+  Y   G  + A   FV
Sbjct: 225 ALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFV 284

Query: 250 HLLS-SDFEPNDYTFTNVISVCYEN-LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
            ++  S   P+ Y+FT++IS C E+     +G+ +HGL +K  +     V NA++ MY +
Sbjct: 285 RMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR 344

Query: 308 HG---MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           +    M E+A + F+++  ++ +SW ++++GY + G    A+  F       +  D    
Sbjct: 345 YNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAF 404

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           +  +   S  + L+LG Q+HG  I  G+ S+  + ++L+ +Y+K G +  AR   +    
Sbjct: 405 SAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK 464

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVR 482
             +  +NA++ G+ +      E+V +LF++  QR A +  D +TF  L++ S S A LV 
Sbjct: 465 SSSVPWNAMIFGYAQH--GQAENVDILFNEMLQRKAPL--DHITFVGLIT-SCSHAGLVD 519

Query: 483 GRSLHAYSIKTGYAADVIVGNAL--ITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
             S    +++T Y   + + +    + +Y + G +D A ++   +  + D + W  +L A
Sbjct: 520 EGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGA 579

Query: 540 YALHG 544
             +HG
Sbjct: 580 CRIHG 584



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG+ +H  ++ SG  ++ F +++LI +Y+K   +D A+K F+     S++ W ++I G
Sbjct: 417 LQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFG 476

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGF 190
           Y   G  E+V  +  +M + +   +  T   ++ +CS   L+++    E ++    K G 
Sbjct: 477 YAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEG--SEILNTMETKYGV 534

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK-AGESEMAFHVFV 249
              +      + +Y  +G   +A+ +   + ++    V   +L   +  G  E+A  V  
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGV 276
           HL  +  EP  ++   ++S  Y  LG+
Sbjct: 595 HLFVA--EPRQHSTYVLLSSMYSGLGM 619


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 204/718 (28%), Positives = 365/718 (50%), Gaps = 29/718 (4%)

Query: 45  SISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYA 104
           S   V C   T     +  ++K    + +L +G+AVHA  L+          N+L+N+Y+
Sbjct: 64  SSPQVKCDSYT-----YSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYS 118

Query: 105 K-------------FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
                         ++R D+ +K+FD M  R+ + W +LI  Y+    Y   +     M 
Sbjct: 119 MCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMM 178

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE--NNVFVGTSLISMYFHSGC 209
           +   K +  +   +  A S L D      +H   +K G E  N+++V +S I MY   GC
Sbjct: 179 KIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGC 238

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVIS 268
              A+ VF     ++    N MI  + +   S     +F   + S D   ++ T  + IS
Sbjct: 239 LEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAIS 298

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
                   E  +QLH   +K   V ++ V NA++ MY +    + + ++FD + E++++S
Sbjct: 299 AASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVS 358

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           W  +IS +V++G   +A+  F E     +  DS  +  ++   S   N ++G Q HG+ +
Sbjct: 359 WNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLL 418

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLD-GFSCKY-TAEFNAILSGFMEKIADDEE 446
           ++G   +  + + L+D+YAK G +++A+ + +  FS +   A +N+++SG+ +    D+ 
Sbjct: 419 RNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQ- 476

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
              ++  Q     + P+ VT + +L        +  G+ LH +SI+     +V V  ALI
Sbjct: 477 -AFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALI 535

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MY+K GSI  A  +F   +++ IV+++ M+  Y  HG+G+ AL +F  M++ G  PD +
Sbjct: 536 DMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAV 595

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMN-LIN 625
           +++ VL AC Y+GL + G+ +F  +  +Y ++P  EHF C+ D+LGRAGR+ +A   +I 
Sbjct: 596 TLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIG 655

Query: 626 SSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD--AGSFILVSNMYAGQGML 683
                    +W +L++  ++    +   L +K+LL++E  +   G  +L+SN+YA +   
Sbjct: 656 LGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNW 715

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +    VR  M +  L KE G SWIEI   ++HF +  + HP+S++IYS L+ L  EMK
Sbjct: 716 ENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMK 773



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 156/629 (24%), Positives = 297/629 (47%), Gaps = 45/629 (7%)

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKFNEHTCSVI 165
           +L +A++LFD +   S + W ++I G + +   +  L    +M  S  + K + +T S +
Sbjct: 19  QLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSV 78

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY-----------FHSGCFR--E 212
           L+AC+   + + G+ +HA  ++     +  V  SL++MY             SG  R   
Sbjct: 79  LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 138

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
              VF  +  + V   N +I  Y +      A   F  ++    +P+  +F NV    + 
Sbjct: 139 VRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFP-AFS 197

Query: 273 NLG-VEEGKQLHGLAVKFG--VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           +LG  +    +HG+ VK G   V ++ V ++ + MY + G  E A+++FD   ERN   W
Sbjct: 198 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 257

Query: 330 TALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
             +IS +V++    + I  F + ++      D   L + I   S     EL  QLH F I
Sbjct: 258 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 317

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           K+  ++ V +  AL+ +Y++   + ++  + D    K    +N ++S F++   +DE   
Sbjct: 318 KNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDE--A 375

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
           ++LF + +   +  D VT + LLS ++       G+  H Y ++ G   + +  + LI M
Sbjct: 376 LMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM-DSYLIDM 434

Query: 509 YAKCGSIDGAFQIF-KGIS-DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
           YAK G I+ A  +F K  S +RD  +WN+M+S Y  +GL   A L+  +M  +   P+ +
Sbjct: 435 YAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVV 494

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYG--LRPILEH----FACMVDLLGRAGRLSEA 620
           ++  +L AC  SG  + G       +Q++G  +R  L+        ++D+  ++G ++ A
Sbjct: 495 TLASILPACNPSGYIDWG-------KQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHA 547

Query: 621 MNLINSSPFSESPLLWRTLV--SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
            N+  S    +S + + T++       M  S   +    +   ++P DA + + V +  +
Sbjct: 548 ENVF-SKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQP-DAVTLVAVLSACS 605

Query: 679 GQGMLDEAAKVRTTMN---DLRLSKEAGC 704
             G++DE  ++  +M    +++ S E  C
Sbjct: 606 YAGLVDEGLQIFESMRTVYNIQPSTEHFC 634



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/359 (20%), Positives = 160/359 (44%), Gaps = 34/359 (9%)

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEFLDLGICCDSSCL 364
           + G    A ++FDA+   + + W  +I G V +    +A+  +  ++     + CDS   
Sbjct: 16  QEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTY 75

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA------KGGDLKS---- 414
           ++V+  C+   NL +G  +H   ++        +  +L+++Y+        G + S    
Sbjct: 76  SSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 135

Query: 415 ---ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
               R + D    +    +N +++ ++    +   + +  FS     G++P PV+F  + 
Sbjct: 136 CDLVRKVFDTMRKRTVVAWNTLIAWYVR--TERYAEAVKQFSMMMKIGIKPSPVSFVNVF 193

Query: 472 SLSASQACLVRGRSLHAYSIKTG--YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
              +S         +H   +K G  Y  D+ V ++ I MYA+ G ++ A ++F    +R+
Sbjct: 194 PAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERN 253

Query: 530 IVSWNAMLSAYALHGLG-KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
              WN M+SA+  +    +G  L F+ ++ E  A D++++L  + A   S L +     F
Sbjct: 254 TEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAA--SHLQK-----F 306

Query: 589 NEIEQIYG--LRPILEHFACMVDLL----GRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
              EQ++   ++ +     C+++ L     R   +  +  + ++ P  +  + W T++S
Sbjct: 307 ELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMP-EKDVVSWNTMIS 364


>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 199/687 (28%), Positives = 345/687 (50%), Gaps = 60/687 (8%)

Query: 104 AKFNRLDVAQKLF---DGMLVRSAIT----WTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           A  N L+ AQ+ F   D  ++ S +T    +TS  +G L D  +++V  I      + + 
Sbjct: 115 ASCNALESAQETFTSVDASMIDSLLTSLKEFTS--RGNLLDA-FKTVSLIRLHASSASQD 171

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY------FHSGCF 210
              H  S +L +C+ ++    G Q+H   I  GFE +  +   L++ Y        +   
Sbjct: 172 LIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVI 231

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
            E  N+     +      N +I  Y + G  + A   +  ++     P+++T+ +V+  C
Sbjct: 232 TENSNILHPFPW------NLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKAC 285

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
            E L +  GK++H       +   + V NA+++MYGK G    A  +FD I ER+ +SW 
Sbjct: 286 GEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWN 345

Query: 331 ALIS-----------------------------------GYVRSGHGGKAINGFLEFLDL 355
           ++IS                                   GY+R+G+   A+    +    
Sbjct: 346 SMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKX 405

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   DS  L   +  CS   + +LG ++H FAI+  +     +  +L+ +Y++  DLK A
Sbjct: 406 GSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHA 465

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
            +L      K    +N+I+SG      D  E+   L  +  L+G+EP+ VT + +L L A
Sbjct: 466 YLLFQLMEAKSLISWNSIISGCCH--MDRSEEASFLLREMLLSGIEPNYVTIASVLPLCA 523

Query: 476 SQACLVRGRSLHAY-SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
             A L  G+  H Y + +  +   +++ NAL+ MYA+ G +  A ++F  + +RD +++ 
Sbjct: 524 RVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYT 583

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           +M++ Y + G G+ AL LFEEM      PD I+++ VL AC +SGL   G  LF ++  +
Sbjct: 584 SMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSL 643

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           YGL P LEHFACM DL GRAG L++A  +I + P+  +P +W TL+   ++  N++    
Sbjct: 644 YGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEW 703

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
           A+++LL+++P++ G ++L++NMYA  G  ++ AKVR  M DL + K  GC+W+++ +   
Sbjct: 704 AAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFS 763

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMK 741
            F+     +  ++EIY  L+ L   +K
Sbjct: 764 PFLVDDTSNANADEIYPLLEGLTMVIK 790



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/532 (21%), Positives = 223/532 (41%), Gaps = 59/532 (11%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +H  ++  G +        L+  Y+ FN L  A  + +   +     W  LI  Y+ 
Sbjct: 193 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVR 252

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  +  L     M +   + +  T   +L+AC    D  FG+++H     S  + ++ V
Sbjct: 253 NGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIV 312

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +LISMY   G    A ++F  +  +D    N MI  Y   G    AF +F  + + D 
Sbjct: 313 HNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDI 372

Query: 257 EPNDYTFTNV-----------------------------------ISVCYENLGVEEGKQ 281
           E N   +  +                                   +  C      + GK+
Sbjct: 373 ELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKE 432

Query: 282 LHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           +H  A++  FG V   +V N+++TMY +    + A  +F  +  ++LISW ++ISG    
Sbjct: 433 IHSFAIRSCFGEVD--TVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHM 490

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRL 398
               +A     E L  GI  +   +A+V+  C+  +NL+ G + H +  +     D + L
Sbjct: 491 DRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLL 550

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
             ALVD+YA+ G +  AR + D    +    + ++++G+   +  + +  + LF +    
Sbjct: 551 WNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGY--GMQGEGQAALKLFEEMNNF 608

Query: 459 GMEPDPVTFSRLLSLSASQACLVRG-------RSLHAYSIKTGYAADVIVGNALITMYAK 511
            ++PD +T   +LS  +    + +G       RSL+  +    + A       +  ++ +
Sbjct: 609 QIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFA------CMTDLFGR 662

Query: 512 CGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGKGALLLFEEMKRE 559
            G ++ A +I + +  +   + W  ++ A  +H    +G+ A     EMK E
Sbjct: 663 AGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPE 714



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 72  GDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           GD KLG+ +H+F ++S   + DT + N+LI +Y++   L  A  LF  M  +S I+W S+
Sbjct: 425 GDAKLGKEIHSFAIRSCFGEVDTVK-NSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSI 483

Query: 131 IKG--YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI-K 187
           I G  ++D  +  S L    +M  S  + N  T + +L  C+ + +   G++ H +   +
Sbjct: 484 ISGCCHMDRSEEASFL--LREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRR 541

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
             F++++ +  +L+ MY  SG   EA  VF  L  +D      MI  Y   GE + A  +
Sbjct: 542 EDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKL 601

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYG 306
           F  + +   +P+  T   V+S C  +  V +G+ L   +   +G+   +     +  ++G
Sbjct: 602 FEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFG 661

Query: 307 KHGMSEEAERMFDAISERNLIS-WTALI 333
           + G+  +A+ +   +  +   + W  LI
Sbjct: 662 RAGLLNKAKEIIRNMPYKPTPAMWATLI 689


>gi|297810965|ref|XP_002873366.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319203|gb|EFH49625.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 205/751 (27%), Positives = 363/751 (48%), Gaps = 72/751 (9%)

Query: 48  SVSCSERTLLF------NDWPQ--------LVKISIGSGDLKLGQAVHAFLLKSGSQNDT 93
           SVSC   T+ F       D P+        L+ + +  GD   G+++H++++K+G + DT
Sbjct: 98  SVSCGRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLEKDT 157

Query: 94  FEANNLINLYAKFNRL-DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
              N L+++YAKF  +   A   FD +  +  ++W ++I G+ ++          C M +
Sbjct: 158 LVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENKMMADAFRSFCLMLK 217

Query: 153 SEEKFNEHTCSVILEACSLLEDRIF---GEQIHAFAI-KSGFENNVFVGTSLISMYFHSG 208
              + N  T + +L  C+ +   I    G QIH++ + +S  + +VFV  SL+S Y   G
Sbjct: 218 EPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVI 267
              EA ++F  +  KD+   N +I  Y    E   A  +F +L+   D   +  T  +++
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDPVTILSIL 337

Query: 268 SVCYENLGVEEGKQLHGLAVKFG-VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
            VC +   +  GK++H   ++   ++ + SVGNA+++ Y + G +  A   F  +S +++
Sbjct: 338 PVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSMKDI 397

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           ISW A++  +  S    + +N      +  I  DS  + +++  C+    +    ++HG+
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEVHGY 457

Query: 387 AIKHGYL---SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT-AEFNAILSGFMEKIA 442
           ++K G L    + +LG AL+D YAK G+++ A  +  G S + T   +N++LSG++   +
Sbjct: 458 SVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVNSGS 517

Query: 443 DDEEDVMV-----------------------------LFSQQRLAGMEPDPVTFSRLLSL 473
            D+  ++                              +F + +  GM P+ VT   LL +
Sbjct: 518 HDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQARGMRPNTVTIMNLLPV 577

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            A  A L   R  H Y I+ G   D+ +   L+ +YAKCGS+  A+ +F+  + RD+V +
Sbjct: 578 CAQLASLHLVRQCHGYIIR-GRLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMF 636

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            AM++ YA+HG GK AL++F  M      PD                   G+ +++ I  
Sbjct: 637 TAMVAGYAVHGRGKEALMIFSHMIDSNIKPD-----------------HDGLQIYDSIRA 679

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
           ++G++P +E +AC VDLL R GRL +A + I   P   +  +W TL+             
Sbjct: 680 VHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEPNANIWGTLLRACTTYNRMDLGH 739

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
             +  LL  E  + G+ +L+SNMYA     +   ++R  M    + K AGCSW+E+D K 
Sbjct: 740 SVANHLLQAESDETGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGKR 799

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMKLKV 744
             FV+    HP  + I+  ++ L  +MK  V
Sbjct: 800 DVFVSGDCSHPRRDSIFDLVNALYLQMKEPV 830



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 267/549 (48%), Gaps = 22/549 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           +VK      +L  G+A+H  + K G    T  + +++N+YAK  R+D  QK+F  M    
Sbjct: 27  VVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFRQMDSVD 86

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W  ++ G       E++       +  E K +  T +++L  C  L D   G+ +H+
Sbjct: 87  PVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNGKSMHS 146

Query: 184 FAIKSGFENNVFVGTSLISMYFHSG-CFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           + IK+G E +  VG +L+SMY   G    +A   F  +A KDV   N +I  +++     
Sbjct: 147 YIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENKMMA 206

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCY---ENLGVEEGKQLHGLAVKFGVVR-EISVG 298
            AF  F  +L    EPN  T  NV+ VC    +N+    G+Q+H   V+   ++  + V 
Sbjct: 207 DAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQTHVFVC 266

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-I 357
           N++V+ Y + G  EEA  +F  +  ++L+SW  +I+GY  +    KA+  F   +  G +
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLVQKGDV 326

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSAR 416
             D   + +++  C+  ++L  G ++H + ++H Y L D  +G AL+  YA+ GD  +A 
Sbjct: 327 SLDPVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL--AGMEPDPVTFSRLLSLS 474
                 S K    +NAIL  F    AD  +    L     L    +  D VT   LL   
Sbjct: 387 WAFSLMSMKDIISWNAILDAF----ADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFC 442

Query: 475 ASQACLVRGRSLHAYSIKTGY---AADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDI 530
            +   + + + +H YS+K G      +  +GNAL+  YAKCG+++ A +IF+G+S+ R +
Sbjct: 443 TNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTL 502

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           V++N++LS Y   G    A +LF EM         + +    ++C         I +F E
Sbjct: 503 VTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESC----FPNEAIGVFRE 558

Query: 591 IEQIYGLRP 599
           I Q  G+RP
Sbjct: 559 I-QARGMRP 566



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 153/333 (45%), Gaps = 14/333 (4%)

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           L S F  +   F +V+  C     +  G+ LHG   K G +    V  +++ MY K    
Sbjct: 13  LLSGFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRM 72

Query: 312 EEAERMFDAISERNLISWTALISGY-VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
           ++ ++MF  +   + + W  +++G  V  G         + F D      S   A ++  
Sbjct: 73  DDCQKMFRQMDSVDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPK-PSSVTFAILLPV 131

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTAE 429
           C    +   G  +H + IK G   D  +G ALV +YAK G  +  A    D  + K    
Sbjct: 132 CVRLGDSYNGKSMHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVS 191

Query: 430 FNAILSGFMEK--IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA---CLVRGR 484
           +NAI++GF E   +AD      ++  +      EP+  T + +L + AS         GR
Sbjct: 192 WNAIIAGFSENKMMADAFRSFCLMLKEP----TEPNYATIANVLPVCASMGKNIAYRSGR 247

Query: 485 SLHAYSIKTGY-AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
            +H+Y ++  +    V V N+L++ Y + G I+ A  +F  +  +D+VSWN +++ YA +
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307

Query: 544 GLGKGALLLFEEMKREG-FAPDDISILGVLQAC 575
                AL LF  + ++G  + D ++IL +L  C
Sbjct: 308 HEWLKALQLFHNLVQKGDVSLDPVTILSILPVC 340



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 18/278 (6%)

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   D      V+  C+  S L  G  LHG   K G+++   +  +++++YAK   +   
Sbjct: 16  GFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDC 75

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP--VTFSRLLSL 473
           + +           +N +L+G          + M  F     A  EP P  VTF+ LL +
Sbjct: 76  QKMFRQMDSVDPVVWNIVLTGLSVSCG---RETMRFFKAMHFAD-EPKPSSVTFAILLPV 131

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS-IDGAFQIFKGISDRDIVS 532
                    G+S+H+Y IKTG   D +VGNAL++MYAK G  I  AF  F  I+D+D+VS
Sbjct: 132 CVRLGDSYNGKSMHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVS 191

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           WNA+++ ++ + +   A   F  M +E   P+  +I  VL  C     S G    +    
Sbjct: 192 WNAIIAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCA----SMGKNIAYRSGR 247

Query: 593 QIYGL---RPILEH--FAC--MVDLLGRAGRLSEAMNL 623
           QI+     R  L+   F C  +V    R GR+ EA +L
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           L+G   D   F  ++   AS + L  GR+LH    K G+ A   V  +++ MYAKC  +D
Sbjct: 14  LSGFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMD 73

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK-REGFAPDDISILGVLQAC 575
              ++F+ +   D V WN +L+  ++   G+  +  F+ M   +   P  ++   +L  C
Sbjct: 74  DCQKMFRQMDSVDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAILLPVC 132

Query: 576 IYSGLSEGG 584
           +  G S  G
Sbjct: 133 VRLGDSYNG 141


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 198/664 (29%), Positives = 335/664 (50%), Gaps = 7/664 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
            HA ++  G +ND      L    +    +  A+ +F  +       +  L++G+  +  
Sbjct: 39  THAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98

Query: 140 YESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
             S L +   + +S + K N  T +  + A S   D   G  IH  AI  G ++ + +G+
Sbjct: 99  PHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGS 158

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +++ MYF      +A  VF  +  KD    N MI  Y K      +  VF  L++     
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218

Query: 259 NDYT-FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
            D T   +++    E   +  G Q+H LA K G      V    +++Y K G  + A  +
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTL 278

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F      +++++ A+I GY  +G    +++ F E +  G    SS L +++    V  +L
Sbjct: 279 FREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLV---PVSGHL 335

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
            L   +HG+++K  +LS   + TAL  +Y+K  +++SAR L D    K    +NA++SG+
Sbjct: 336 MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +      ED + LF + + +   P+PVT + +LS  A    L  G+ +H     T + +
Sbjct: 396 TQN--GLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
            + V  ALI MYAKCGSI  A ++F  +  ++ V+WN M+S Y LHG G+ AL +F EM 
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEML 513

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
             G AP  ++ L VL AC ++GL + G  +FN +   YG  P ++H+AC+VD+LGRAG L
Sbjct: 514 NSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHL 573

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
             A+  I + P    P +W TL+   ++  ++  +   S++L +L+P + G  +L+SN++
Sbjct: 574 QRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           +      +AA VR T    +L+K  G + IEI    H F +  + HP+ + I+ KL+ L 
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLE 693

Query: 738 DEMK 741
            +M+
Sbjct: 694 GKMR 697



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 232/487 (47%), Gaps = 20/487 (4%)

Query: 67  ISIGSG--DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           IS  SG  D + G  +H   +  G  ++    +N++ +Y KF R++ A+K+FD M  +  
Sbjct: 126 ISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           I W ++I GY  +  Y   + +  D+   S  + +  T   IL A + L++   G QIH+
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            A K+G  ++ +V T  IS+Y   G  + A  +FR     D+   N MI  Y   GE+E+
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETEL 305

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           +  +F  L+ S  +    T  +++ V    + +     +HG ++K   +   SV  A+ T
Sbjct: 306 SLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLI---YAIHGYSLKSNFLSHTSVSTALTT 362

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           +Y K    E A ++FD   E++L SW A+ISGY ++G    AI+ F E  +     +   
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVT 422

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           +  ++  C+    L LG  +H       + S + + TAL+ +YAK G +  AR L D   
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMP 482

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR- 482
            K    +N ++SG+   +    ++ + +FS+   +G+ P PVTF  +L  + S A LV+ 
Sbjct: 483 KKNEVTWNTMISGY--GLHGHGQEALTIFSEMLNSGIAPTPVTFLCVL-YACSHAGLVKE 539

Query: 483 -----GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAM 536
                   +H Y    G+   V     ++ +  + G +  A Q  + +  +   S W  +
Sbjct: 540 GDEIFNSMIHRY----GFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETL 595

Query: 537 LSAYALH 543
           L A  +H
Sbjct: 596 LGACRIH 602



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 224/464 (48%), Gaps = 9/464 (1%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           Q HA  +  GF N++ + T L       G    A ++F  +   DV   N ++  ++   
Sbjct: 38  QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 240 ESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
               +  VF HL  S+D +PN  T+   IS          G  +HG A+  G   E+ +G
Sbjct: 98  SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           + IV MY K    E+A ++FD + E++ I W  +ISGY ++    ++I  F + ++    
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 359 -CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D++ L  ++   +    L LG+Q+H  A K G  S   + T  + +Y+K G +K A  
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAST 277

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L   F       +NA++ G+      + E  + LF +  L+G +   +  S L+SL    
Sbjct: 278 LFREFRRPDIVAYNAMIHGYTSN--GETELSLSLFKELMLSGAK---LKSSTLVSLVPVS 332

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L+   ++H YS+K+ + +   V  AL T+Y+K   I+ A ++F    ++ + SWNAM+
Sbjct: 333 GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           S Y  +GL + A+ LF EM+   F+P+ ++I  +L AC   G    G  + + +      
Sbjct: 393 SGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             I    A ++ +  + G ++EA  L +  P  ++ + W T++S
Sbjct: 453 SSIYVSTA-LIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMIS 494



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 1/259 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           LV +   SG L L  A+H + LKS   + T  +  L  +Y+K N ++ A+KLFD    +S
Sbjct: 325 LVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKS 384

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W ++I GY  +G  E  + +  +M  SE   N  T + IL AC+ L     G+ +H 
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHD 444

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
               + FE++++V T+LI MY   G   EA  +F  +  K+    N MI  Y   G  + 
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQE 504

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIV 302
           A  +F  +L+S   P   TF  V+  C     V+EG ++ + +  ++G    +     +V
Sbjct: 505 ALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVV 564

Query: 303 TMYGKHGMSEEAERMFDAI 321
            + G+ G  + A +  +A+
Sbjct: 565 DILGRAGHLQRALQFIEAM 583


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 209/691 (30%), Positives = 349/691 (50%), Gaps = 58/691 (8%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY-LDDGDYESVLGIACDMYRSE- 154
           N ++N YAK   L  A++LFD M  R   +W +L+       G + S   + C     + 
Sbjct: 91  NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQL 150

Query: 155 ----EKFN-------EHTCSVILEACSLLE--DRIFGEQIHAFAIKSGFENNVFVGTSLI 201
                KF+       E     +   C  ++   R+F  QI            +F   S++
Sbjct: 151 LGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF-SQIE--------RPTIFCRNSML 201

Query: 202 SMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY 261
           + Y        A   F  +A +DV   N MI   +++G    A  + V +       +  
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           T+T+ ++ C     +  GKQLH   ++     +  V +A++ +Y K G  +EA+R+F+++
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
            +RN +SWT LI G ++     K++  F +     +  D   LAT+I GC    +L LG 
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 381

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA-------------------------- 415
           QLH   +K G+   + +  +L+ +YAK GDL++A                          
Sbjct: 382 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 441

Query: 416 -----RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ-RLAGMEPDPVTFSR 469
                R   DG + +    +NA+L  +++  A  EED + ++S       + PD VT+  
Sbjct: 442 NIIKAREFFDGMATRNAITWNAMLGAYIQHGA--EEDGLKMYSAMLSQKDVTPDWVTYVT 499

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           L    A       G  +  +++K G   +V V NA ITMY+KCG I  A ++F  ++ +D
Sbjct: 500 LFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKD 559

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           +VSWNAM++ Y+ HG+GK A   F++M  +G  PD IS + VL  C +SGL + G   F+
Sbjct: 560 VVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFD 619

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            + +++G+ P LEHF+CMVDLLGRAG L+EA +LI+  P   +  +W  L+S  K+  N 
Sbjct: 620 MMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGND 679

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           + + LA+K + +L+  D+GS++L++ +Y+  G  D++A+VR  M D  + K  G SW+E+
Sbjct: 680 ELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEV 739

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           ++K+H F A    HP+   I +K+D L +++
Sbjct: 740 ENKVHVFKADDVSHPQVIAIRNKMDELMEKI 770



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 184/397 (46%), Gaps = 34/397 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ +HA +++S  Q D + A+ LI LYAK      A+++F+ +  R++++WT LI G
Sbjct: 276 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 335

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            L    +   + +   M       ++   + ++  C    D   G Q+H+  +KSG    
Sbjct: 336 SLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA 395

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE------------- 240
           + V  SLIS+Y   G  + AE VF  ++ +D+     MI  Y++ G              
Sbjct: 396 IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMAT 455

Query: 241 ------------------SEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQ 281
                              E    ++  +LS  D  P+  T+  +   C +    + G Q
Sbjct: 456 RNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQ 515

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           + G  VK G++  +SV NA +TMY K G   EA+++FD ++ ++++SW A+I+GY + G 
Sbjct: 516 IIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGM 575

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG-LQLHGFAIKHGYLSDVRLGT 400
           G +A   F + L  G   D      V+ GCS    ++ G L        HG    +   +
Sbjct: 576 GKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFS 635

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAILSG 436
            +VD+  + G L  A+ L+D    K TAE + A+LS 
Sbjct: 636 CMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 672



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 232/498 (46%), Gaps = 62/498 (12%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F  N+++  YAK   +D A + F+ M  R  ++W  +I      G     LG+  +M+R 
Sbjct: 195 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 254

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
             + +  T +  L AC+ L    +G+Q+HA  I+S  + + +V ++LI +Y   G F+EA
Sbjct: 255 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 314

Query: 214 ENVFRGLAYKDVRCVNFMI---LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           + VF  L  ++      +I   L+Y    +S     +F  + +     + +    +IS C
Sbjct: 315 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKS---VELFNQMRAELMAIDQFALATLISGC 371

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
           +  + +  G+QLH L +K G  R I V N+++++Y K G  + AE +F ++SER+++SWT
Sbjct: 372 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 431

Query: 331 ALISGYVRSGHGGKAINGFLEFLD-------------LG--------------------- 356
           ++I+ Y + G+  KA     EF D             LG                     
Sbjct: 432 SMITAYSQIGNIIKA----REFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487

Query: 357 --ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             +  D     T+  GC+     +LG Q+ G  +K G + +V +  A + +Y+K G +  
Sbjct: 488 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 547

Query: 415 ARMLLDGFSCKYTAEFNAILSGF----MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
           A+ L D  + K    +NA+++G+    M K A    D M+        G +PD +++  +
Sbjct: 548 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML------SKGAKPDYISYVAV 601

Query: 471 LSLSASQACLVRGRSLHAYSIKT---GYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           LS   S + LV+   L+ + + T   G +  +   + ++ +  + G +  A  +   +  
Sbjct: 602 LS-GCSHSGLVQEGKLY-FDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPM 659

Query: 528 RDIVS-WNAMLSAYALHG 544
           +     W A+LSA  +HG
Sbjct: 660 KPTAEVWGALLSACKIHG 677



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 139/567 (24%), Positives = 248/567 (43%), Gaps = 52/567 (9%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG-LAYKDVRCVNFMILEYNKAG 239
           +H   +  G  + VF+  +L+  Y   G   +A  + R  +   +V   N M+  Y K G
Sbjct: 42  LHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 101

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVIS-----VCYENLGVEE-GKQLHGLAVKFGVVR 293
               A  +F  +   D    +   ++        +    LG  E   QL GL  KF    
Sbjct: 102 SLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWG 161

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAI-------------------------------S 322
           +  V  A+V M+ + G  + A R+F  I                               +
Sbjct: 162 DPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 221

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ER+++SW  +I+   +SG   +A+   +E    G+  DS+   + +  C+   +L  G Q
Sbjct: 222 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 281

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           LH   I+     D  + +AL+++YAK G  K A+ + +    + +  +  ++ G ++   
Sbjct: 282 LHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYEC 341

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
             +   + LF+Q R   M  D    + L+S   ++  L  GR LH+  +K+G+   ++V 
Sbjct: 342 FSKS--VELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVS 399

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
           N+LI++YAKCG +  A  +F  +S+RDIVSW +M++AY+  G    A   F+ M      
Sbjct: 400 NSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR--- 456

Query: 563 PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMN 622
            + I+   +L A I  G  E G+ +++ +     + P    +  +       G       
Sbjct: 457 -NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQ 515

Query: 623 LINSSPFSESPLLWRTLVSVSKLMANSKFS-ILASKRLLD-LEPKDAGSFILVSNMYAGQ 680
           +I  +   ++ L+    V+ + +   SK   I  +++L D L  KD  S+  +   Y+  
Sbjct: 516 IIGHT--VKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQH 573

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           GM  +AAK   T +D+ LSK A   +I
Sbjct: 574 GMGKQAAK---TFDDM-LSKGAKPDYI 596



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 13/278 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +    GDL+  +    F+  S S+ D     ++I  Y++   +  A++ FDGM  R+
Sbjct: 402 LISLYAKCGDLQNAE----FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRN 457

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL-EACSLLEDRIFGEQIH 182
           AITW +++  Y+  G  E  L +   M   ++   +    V L   C+ +     G+QI 
Sbjct: 458 AITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQII 517

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
              +K+G   NV V  + I+MY   G   EA+ +F  L  KDV   N MI  Y++ G  +
Sbjct: 518 GHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGK 577

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG---- 298
            A   F  +LS   +P+  ++  V+S C  +  V+EGK    +  +   V  IS G    
Sbjct: 578 QAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTR---VHGISPGLEHF 634

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLIS-WTALISG 335
           + +V + G+ G   EA+ + D +  +     W AL+S 
Sbjct: 635 SCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 672



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/472 (21%), Positives = 190/472 (40%), Gaps = 49/472 (10%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA- 320
              + +  C     +   + LHG  V  G+   + + N ++  Y   G   +A R+  A 
Sbjct: 22  ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGF--LEFLDLG----ICCDSSCLATVIDGCSVC 374
           I E N+I+   +++GY + G    A   F  +   D+     +  D+S  A     C   
Sbjct: 82  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
              EL  QL G   K  +  D  + TALVD++ + G +  A  L            N++L
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201

Query: 435 SGFMEKIADD----------EEDVMV-------------------LFSQQRLAGMEPDPV 465
           +G+ +    D          E DV+                    L  +    G+  D  
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T++  L+  A    L  G+ LHA  I++    D  V +ALI +YAKCGS   A ++F  +
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
            DR+ VSW  ++     +     ++ LF +M+ E  A D  ++  ++  C     +   +
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC----FNRMDL 377

Query: 586 CLFNEIEQI---YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
           CL  ++  +    G    +     ++ L  + G L  A   + SS      + W ++++ 
Sbjct: 378 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITA 436

Query: 643 SKLMANSKFSILASKRLLD-LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
              + N    I+ ++   D +  ++A ++  +   Y   G  ++  K+ + M
Sbjct: 437 YSQIGN----IIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAM 484


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 200/681 (29%), Positives = 344/681 (50%), Gaps = 88/681 (12%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D  + N  I  + +  + D A +LF+ M  RS+I+W ++I G L +  +     +A  ++
Sbjct: 48  DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFY----LARQLF 103

Query: 152 RSEEKFNEHTCSVILEAC----SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
                 +  + +V++  C    +L   R+  +Q+         E +V    +++S Y  +
Sbjct: 104 EKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMP--------ERDVVSWNAMLSGYAQN 155

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF-----VHLLSSDF------ 256
           G  +EA+ +F  +  K+    N M+  Y + G  E A  +F       L+S +       
Sbjct: 156 GYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYV 215

Query: 257 ----------------EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
                           E ++ ++  +IS   +N  + E ++L     +   VR++    A
Sbjct: 216 KRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRL----FEESPVRDVFTWTA 271

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V+ Y ++GM +EA R+FD + E+N +SW A+I+GYV+     K ++   E  +   C +
Sbjct: 272 MVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQC----KRMDQARELFEAMPCQN 327

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            S   T+I G                                   YA+ GD+  AR   D
Sbjct: 328 VSSWNTMITG-----------------------------------YAQNGDIAQARNFFD 352

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               + +  + AI++G+ +  +   E+ + LF + +  G   +  TF+  LS  A  A L
Sbjct: 353 RMPQRDSISWAAIIAGYAQ--SGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 410

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H   +K G  +   VGNAL+ MY KCG+ID A+ +F+GI ++++VSWN M++ Y
Sbjct: 411 ELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGY 470

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           A HG GK AL+LFE MK+ G  PDD++++GVL AC ++GL + G   F  + Q YG+   
Sbjct: 471 ARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITAN 530

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
            +H+ CM+DLLGRAGRL +A NL+ + PF      W  L+  S++  N++    A+K + 
Sbjct: 531 SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIF 590

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           ++EP ++G ++L+SN+YA  G   +  ++R  M D  + K  G SW+E+ +K+H F    
Sbjct: 591 EMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGD 650

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
             HPE + IY+ L+ L+ +MK
Sbjct: 651 SVHPERDRIYTFLEELDLKMK 671



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 147/594 (24%), Positives = 260/594 (43%), Gaps = 76/594 (12%)

Query: 37  KSQVAYLCSISSVSCSERTLLFNDWPQLVKISIG---SGDLKLGQAVHAF-LLKSGSQND 92
           K  +A    + +  C     LFN  P+   IS     SG L   +   A  L +     D
Sbjct: 51  KWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRD 110

Query: 93  TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
               N +I+   ++  L  A+ LFD M  R  ++W +++ GY  +G  +           
Sbjct: 111 LVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKE---------- 160

Query: 153 SEEKFNEHTCS----------------VILEACSLLEDRIFGEQIHAFAIKSGF------ 190
           ++E F+E  C                  I +A  L E +   E I    +  G+      
Sbjct: 161 AKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRL 220

Query: 191 -----------ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
                      E +     ++IS Y  +G   EA+ +F     +DV     M+  Y + G
Sbjct: 221 VDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNG 280

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             + A  VF  +     E N  ++  +I+   +   +++ ++L     +    + +S  N
Sbjct: 281 MLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMDQAREL----FEAMPCQNVSSWN 332

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            ++T Y ++G   +A   FD + +R+ ISW A+I+GY +SG+G +A++ F+E    G   
Sbjct: 333 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL 392

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           + S   + +  C+  + LELG Q+HG  +K G  S   +G AL+ +Y K G++  A ++ 
Sbjct: 393 NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVF 452

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +G   K    +N +++G+       E   ++LF   +  G+ PD VT   +LS + S   
Sbjct: 453 EGIEEKEVVSWNTMIAGYARHGFGKE--ALMLFESMKKTGILPDDVTMVGVLS-ACSHTG 509

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNA-----LITMYAKCGSIDGAFQIFKGIS-DRDIVSW 533
           LV   + + YS+   Y    I  N+     +I +  + G +D A  + K +  + D  +W
Sbjct: 510 LVDKGTEYFYSMTQDYG---ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW 566

Query: 534 NAMLSAYALHG---LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
            A+L A  +HG   LG+ A  +  EM+     PD+ S + VL + +Y+     G
Sbjct: 567 GALLGASRIHGNTELGEKAAKMIFEME-----PDN-SGMYVLLSNLYAASGRWG 614



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 116/306 (37%), Gaps = 64/306 (20%)

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
           ++ +++ W   I+ ++R+G    A+  F           S     +I GC       L  
Sbjct: 45  TDADIVKWNIAITNHMRNGQCDSALRLFNSMPRR----SSISWNAMISGCLSNDKFYLAR 100

Query: 382 QLH---------------GFAIKHGYLSDVRL------------GTALVDIYAKGGDLKS 414
           QL                   +++  L   RL              A++  YA+ G +K 
Sbjct: 101 QLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKE 160

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF-------------------SQQ 455
           A+ + D   CK +  +N +L+ +++      ED   LF                    + 
Sbjct: 161 AKEIFDEMPCKNSISWNGMLAAYVQN--GRIEDARRLFESKADWELISWNCMMGGYVKRN 218

Query: 456 RLAGM--------EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
           RL           E D V+++ ++S  A    L+  + L   S       DV    A+++
Sbjct: 219 RLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESP----VRDVFTWTAMVS 274

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
            Y + G +D A ++F G+ +++ VSWNA+++ Y        A  LFE M  +  +  +  
Sbjct: 275 GYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTM 334

Query: 568 ILGVLQ 573
           I G  Q
Sbjct: 335 ITGYAQ 340



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 97/247 (39%), Gaps = 59/247 (23%)

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           AD++  N  IT + + G  D A ++F  +  R  +SWNAM+S    +     A  LFE+M
Sbjct: 47  ADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKM 106

Query: 557 KREGFAPDDISILGVLQ----------------------ACIYSGLSEGGIC-----LFN 589
                   ++ I G ++                        + SG ++ G       +F+
Sbjct: 107 PTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFD 166

Query: 590 EIE------------------QIYGLRPILEHFA--------CMVDLLGRAGRLSEAMNL 623
           E+                   +I   R + E  A        CM+    +  RL +A  +
Sbjct: 167 EMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI 226

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGSFILVSNMYAGQGM 682
            +  P     + W T+  +S    N +  +L ++RL +  P +D  ++  + + Y   GM
Sbjct: 227 FDRMP-ERDEVSWNTM--ISGYAQNGE--LLEAQRLFEESPVRDVFTWTAMVSGYVQNGM 281

Query: 683 LDEAAKV 689
           LDEA +V
Sbjct: 282 LDEARRV 288


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 172/485 (35%), Positives = 279/485 (57%), Gaps = 4/485 (0%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMYGKHGMSEEAER 316
           P+   ++ ++  C     VE+G+ +H   V    +   + + N IV MY K G  ++A R
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           MFD +  +++++WTALI+G+ ++     A+  F + L LG+  +   L++++        
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG 204

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L+ G QLH F +K+GY S V +G+ALVD+YA+ G + +A++  DG   K    +NA++SG
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
              K  + E  + +L+  QR    +P   T+S + S  AS   L +G+ +HA+ IK+G  
Sbjct: 265 HARK-GEGEHALHLLWKMQR-KNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLK 322

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
               +GN L+ MYAK GSID A ++F  +   D+VSWN ML+  A HGLGK  L  FE+M
Sbjct: 323 LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQM 382

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
            R G  P++IS L VL AC +SGL + G+  F E+ + Y + P + H+   VDLLGR G 
Sbjct: 383 LRIGIEPNEISFLCVLTACSHSGLLDEGLYYF-ELMKKYKVEPDVPHYVTFVDLLGRVGL 441

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A   I   P   +  +W  L+   ++  N +  + A++R  +L+P D+G  +L+SN+
Sbjct: 442 LDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNI 501

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA  G   + AKVR  M +  + K+  CSW+EI++ +H FVA+ + HP+ +EI  K + +
Sbjct: 502 YASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEI 561

Query: 737 NDEMK 741
           + ++K
Sbjct: 562 SGKIK 566



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 191/380 (50%), Gaps = 1/380 (0%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLI-NLYAKFNRLDVAQKLF 116
           +N + +L+K     G ++ G+ VHA L+ S   ++     N+I N+YAK   LD A+++F
Sbjct: 87  YNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMF 146

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           D M  +  +TWT+LI G+  +      L +   M R   + N  T S +L+A        
Sbjct: 147 DEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLD 206

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G Q+HAF +K G++++V+VG++L+ MY   G    A+  F G+  K     N +I  + 
Sbjct: 207 PGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHA 266

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           + GE E A H+   +   +F+P  +T+++V S C     +E+GK +H   +K G+     
Sbjct: 267 RKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAF 326

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           +GN ++ MY K G  ++A+R+FD + + +++SW  +++G  + G G + ++ F + L +G
Sbjct: 327 IGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIG 386

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           I  +      V+  CS    L+ GL       K+    DV      VD+  + G L  A 
Sbjct: 387 IEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAE 446

Query: 417 MLLDGFSCKYTAEFNAILSG 436
             +     + TA     L G
Sbjct: 447 RFIREMPIEPTAAVWGALLG 466


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 193/638 (30%), Positives = 340/638 (53%), Gaps = 6/638 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G  VHA   K G  ++ +  + L+N+YAK +++D A+++F+ +  R+ + W +++ G
Sbjct: 325 LNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGG 384

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +  +G  + V+     M R   + +E T + I  AC+ L    FG Q+H   IK+ F +N
Sbjct: 385 FAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASN 444

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FV  +L+ MY  SG  +EA   F  +   D    N +I+ Y +   ++ AF +F  ++S
Sbjct: 445 LFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVS 504

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +   P++ +  +++S C     ++ G+Q H L VK G+      G++++ MY K G+   
Sbjct: 505 NGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLA 564

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +F ++  RN++S  ALI+GY   GH  +AI+ F E   +G+       A ++DGC  
Sbjct: 565 ARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDG 623

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRL-GTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFN 431
              L LG Q+HG  +K G+LS   +   +L+ +Y        +  L       K    + 
Sbjct: 624 AFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWT 683

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A++SG+ ++  +  E  +  +   R   + PD   F+ +L   A  + L  G+ +H+   
Sbjct: 684 ALISGYAQQ--NHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIF 741

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGAL 550
            TG+  D +  ++LI MYAKCG + G+ Q+F+ +  R +++SWN+M+   A +G  + AL
Sbjct: 742 HTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEAL 801

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            +F++M+++   PD+++ LGVL AC ++G    G  +F+ +   Y L P ++H  CMVD+
Sbjct: 802 EIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDI 861

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGR G L+EA   IN       P+LW TL+   +   +      A+ +L++L+P+ + S+
Sbjct: 862 LGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSY 921

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           +L+S++YA       A  +R  M    + K  G SWIE
Sbjct: 922 VLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 172/614 (28%), Positives = 274/614 (44%), Gaps = 53/614 (8%)

Query: 35  NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTF 94
           NP S+   +C           L F++ P+ V  +     L   + +H+  LK G      
Sbjct: 24  NPHSEFLQICLQHCWRIQAHNL-FDEKPKPVLQA-----LSTAKVIHSKSLKIGVGLKGL 77

Query: 95  EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE 154
             N +++LY K   +D AQK F  +  +    W S++  YLD G + +V+     M+  E
Sbjct: 78  LGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHE 137

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
            + NE T +++L ACS L+D  FG Q+H    K+GF    F    LI MY      R+A 
Sbjct: 138 VRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDAR 197

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
            VF G    D      +I  Y + G    A  VF  +      P+  T   V+       
Sbjct: 198 LVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVV------- 250

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
                                   NA V +    G   +A ++F  I   N+++W  +IS
Sbjct: 251 ------------------------NAYVAL----GRLADARKLFTQIPNPNVVAWNVMIS 282

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           G+ + G   +AI+ FLE    G+    S L +V+   +  S L  G  +H  A K G   
Sbjct: 283 GHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDD 342

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +V +G+ALV++YAK   + +A+ + +    +    +NA+L GF +      ++VM  FS 
Sbjct: 343 NVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQN--GLAQEVMEFFSC 400

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            +  G +PD  TF+ + S  AS   L  G  LH   IK  +A+++ V NAL+ MYAK G+
Sbjct: 401 MKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGA 460

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +  A + F+ +   D VSWNA++  Y        A  +F  M   G  PD++S+  ++ A
Sbjct: 461 LKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSA 520

Query: 575 CI-YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           C     L  G  C    ++   GL       + ++D+  + G +  A ++  S P     
Sbjct: 521 CANVQELKRGQQCHCLLVK--VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPS---- 574

Query: 634 LLWRTLVSVSKLMA 647
              R +VSV+ L+A
Sbjct: 575 ---RNVVSVNALIA 585



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/571 (24%), Positives = 269/571 (47%), Gaps = 16/571 (2%)

Query: 78  QAVHAF--LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +AV  F  + + G   D      ++N Y    RL  A+KLF  +   + + W  +I G+ 
Sbjct: 226 EAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHA 285

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
             G  E  +    ++ ++  K    +   +L A + L    +G  +HA A K G ++NV+
Sbjct: 286 KRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVY 345

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           VG++L++MY        A+ VF  L  +++   N M+  + + G ++     F  +    
Sbjct: 346 VGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHG 405

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P+++TFT++ S C     +  G QLH + +K      + V NA+V MY K G  +EA 
Sbjct: 406 PQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEAR 465

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           + F+ +   + +SW A+I GYV+  +  +A   F   +  G+  D   LA+++  C+   
Sbjct: 466 KQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQ 525

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L+ G Q H   +K G  +    G++L+D+Y K G + +AR +      +     NA+++
Sbjct: 526 ELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIA 585

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+        E+ + LF + ++ G++P  VTF+ LL        L  GR +H   +K G+
Sbjct: 586 GY---TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGF 642

Query: 496 -AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGLGKGALLLF 553
            ++  +V  +L+ +Y        +  +F  +   + +V W A++S YA     + AL  +
Sbjct: 643 LSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFY 702

Query: 554 EEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQ-IYGLRPILEHFAC--MVD 609
           + M+ +   PD  +   VL+AC   S L  G      EI   I+     ++   C  ++D
Sbjct: 703 QHMRSDNILPDQAAFASVLRACAGMSSLQNG-----QEIHSLIFHTGFNMDEVTCSSLID 757

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           +  + G +  ++ +    P   + + W +++
Sbjct: 758 MYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 169/376 (44%), Gaps = 5/376 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +LK GQ  H  L+K G    T   ++LI++Y K   +  A+ +F  M  R+ ++  +LI 
Sbjct: 526 ELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIA 585

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF-E 191
           GY   G  E  + +  ++     K  E T + +L+ C        G QIH   +K GF  
Sbjct: 586 GY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLS 644

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFHVFVH 250
           ++  V  SL+ +Y +S  F ++E +F  L Y K +     +I  Y +    E A   + H
Sbjct: 645 SSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQH 704

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + S +  P+   F +V+  C     ++ G+++H L    G   +    ++++ MY K G 
Sbjct: 705 MRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGD 764

Query: 311 SEEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            + + ++F  +  R N+ISW ++I G  ++G+  +A+  F +     I  D      V+ 
Sbjct: 765 VKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLS 824

Query: 370 GCSVCSNLELGLQLHGFAI-KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            CS    +  G ++    +  +  L  V     +VDI  + G L  A   ++   CK   
Sbjct: 825 ACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADP 884

Query: 429 EFNAILSGFMEKIADD 444
              + L G   K  D+
Sbjct: 885 MLWSTLLGACRKHGDE 900



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 148/323 (45%), Gaps = 23/323 (7%)

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK-- 440
           +H  ++K G      LG  +VD+Y K G++  A+        K    +N++LS +++   
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
            A   +  + +++ +    + P+  TF+ +LS  +    +  GR +H    KTG+     
Sbjct: 123 FATVVQSFVCMWNHE----VRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSF 178

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
               LI MYAKC  +  A  +F G  + D VSW A+++ Y   G    A+ +F+ M+R G
Sbjct: 179 CQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVG 238

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            APD I+++ V+ A +  G       LF +I       P +  +  M+    + G   EA
Sbjct: 239 HAPDQITLVTVVNAYVALGRLADARKLFTQIPN-----PNVVAWNVMISGHAKRGFAEEA 293

Query: 621 MNL--------INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           ++         + ++  S   +L   + S+S L   S     A+K  LD +    GS ++
Sbjct: 294 ISFFLELKKTGLKATRSSLGSVL-SAIASLSMLNYGSMVHAQATKEGLD-DNVYVGSALV 351

Query: 673 VSNMYAGQGMLDEAAKVRTTMND 695
             NMYA    +D A +V  ++ +
Sbjct: 352 --NMYAKCSKMDAAKQVFNSLGE 372



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 11/221 (4%)

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L   + +H+ S+K G     ++GN ++ +Y KCG++D A + F  +  +D+ +WN++LS 
Sbjct: 57  LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE---GGICLFNEIEQIYG 596
           Y  HGL    +  F  M      P++ +   VL AC  SGL +   G        +  +G
Sbjct: 117 YLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSAC--SGLQDVNFGRQVHCGVFKTGFG 174

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSIL 654
            R   +    ++D+  +   L +A  L+     +   + W  L++  V          + 
Sbjct: 175 FRSFCQ--GGLIDMYAKCRYLRDA-RLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVF 231

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
              + +   P D  + + V N Y   G L +A K+ T + +
Sbjct: 232 DRMQRVGHAP-DQITLVTVVNAYVALGRLADARKLFTQIPN 271



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR- 122
           +++   G   L+ GQ +H+ +  +G   D    ++LI++YAK   +  + ++F  M  R 
Sbjct: 720 VLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRN 779

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           + I+W S+I G   +G  E  L I   M +     +E T   +L ACS
Sbjct: 780 NVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACS 827


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 173/571 (30%), Positives = 310/571 (54%), Gaps = 10/571 (1%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H    K+G   ++FV TSL++ Y   G  R+A  +F G+  ++V     ++  Y    +
Sbjct: 100 VHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQ 159

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
             +   VFV +L     P+ YT    ++ C  +  V+ GKQ+HG A+K+G     S+GN+
Sbjct: 160 PALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNS 219

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK-AINGFLEFLDLGICC 359
           + ++Y K G  + A R F  I E+N+I+WT +IS         +  ++ F++ L  G+  
Sbjct: 220 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMP 279

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   L +V+  C    +L LG Q+  F+ K G  +++ +  + + +Y + G+   A  L 
Sbjct: 280 NEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLF 339

Query: 420 DGFSCKYTAEFNAILSGF---MEKIADDEE------DVMVLFSQQRLAGMEPDPVTFSRL 470
           +         +NA++SG+   M+   DD +        + +F   + + M+PD  TFS +
Sbjct: 340 EQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSI 399

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           LS+ ++   L +G  +HA +IK+G+ +DV+V +AL+ MY KCG I  A + F  +  R  
Sbjct: 400 LSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTF 459

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           V+W +M+S Y+ HG  + A+ LFEEM+  G  P++I+ + +L AC Y+GL E     F+ 
Sbjct: 460 VTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDM 519

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           +++ Y + P+++H+ CM+D+  R GR+ +A + I  + F  +  +W +LV+  +   N +
Sbjct: 520 MKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME 579

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            +  A+ +LL+L+PK   ++IL+ NMY       + A+VR  M    +      SWI I 
Sbjct: 580 LAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIK 639

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            K++ F A+ + HP++ E+Y  L+ L ++ K
Sbjct: 640 DKVYFFRANDRTHPQATELYQLLENLLEKAK 670



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 244/489 (49%), Gaps = 20/489 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L   +AVH  + K+G+  D F A +L+N Y +      A++LFDGM  R+ +TWT+L+
Sbjct: 92  GSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALV 151

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +      L +  +M       + +T    L AC    D   G+Q+H +AIK G E
Sbjct: 152 TGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAE 211

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES-EMAFHVFVH 250
           +   +G SL S+Y   G    A   F  +  K+V     MI    +  E  E+   +F+ 
Sbjct: 212 SITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFID 271

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +L     PN++T T+V+S+C   L +  GKQ+   + K G    + V N+ + +Y + G 
Sbjct: 272 MLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGE 331

Query: 311 SEEAERMFDAISERNLISWTALISGYVR-----------SGHGGKAINGFLEFLDLGICC 359
           ++EA R+F+ + + ++I+W A+ISGY +              G +A+  F +     +  
Sbjct: 332 TDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKP 391

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D    ++++  CS    LE G Q+H   IK G+LSDV + +ALV++Y K G ++ A    
Sbjct: 392 DLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAF 451

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                +    + +++SG+ +      ++ + LF + RLAG+ P+ +TF  LLS + S A 
Sbjct: 452 LEMPTRTFVTWTSMISGYSQH--GQPQEAIQLFEEMRLAGVRPNEITFVSLLS-ACSYAG 508

Query: 480 LVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFK--GISDRDIVSWNA 535
           LV     +   +K  Y  + +V +   +I M+ + G ++ AF   K  G    + + W++
Sbjct: 509 LVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAI-WSS 567

Query: 536 MLSAYALHG 544
           +++    HG
Sbjct: 568 LVAGCRSHG 576



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 18/327 (5%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  ++  C E   +   + +HG   K G   ++ V  ++V  Y + G + +A R+FD + 
Sbjct: 81  YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ERN+++WTAL++GY  +      +  F+E L++G       L   ++ C    +++LG Q
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +HG+AIK+G  S   +G +L  +YAK G L SA         K    +  ++S      A
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISA----CA 256

Query: 443 DDEEDV---MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
           +DEE V   + LF    + G+ P+  T + ++SL  ++  L  G+ + A+S K G   ++
Sbjct: 257 EDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA---------LHGLGKG-- 548
            V N+ + +Y + G  D A ++F+ + D  I++WNAM+S YA         L    +G  
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ 376

Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC 575
           AL +F ++KR    PD  +   +L  C
Sbjct: 377 ALTIFRDLKRSVMKPDLFTFSSILSVC 403



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 161/316 (50%), Gaps = 12/316 (3%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           + S D+ LG+ VH + +K G+++ T   N+L +LYAK   LD A + F  +  ++ ITWT
Sbjct: 190 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 249

Query: 129 SLIKGYLDDGD-YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
           ++I    +D +  E  L +  DM       NE T + ++  C    D   G+Q+ AF+ K
Sbjct: 250 TMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 309

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE----- 242
            G E N+ V  S + +Y   G   EA  +F  +    +   N MI  Y +  +S      
Sbjct: 310 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 369

Query: 243 ------MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
                  A  +F  L  S  +P+ +TF++++SVC   + +E+G+Q+H   +K G + ++ 
Sbjct: 370 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 429

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V +A+V MY K G  ++A + F  +  R  ++WT++ISGY + G   +AI  F E    G
Sbjct: 430 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 489

Query: 357 ICCDSSCLATVIDGCS 372
           +  +     +++  CS
Sbjct: 490 VRPNEITFVSLLSACS 505



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 12/244 (4%)

Query: 342 GGKAINGFLEFLDL---------GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           GG  +   L  LD+         G    S+    ++  C    +L     +HG   K G 
Sbjct: 50  GGGGMEAPLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGA 109

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
            +D+ + T+LV+ Y + G  + AR L DG   +    + A+++G+   +       + +F
Sbjct: 110 GADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGY--TLNSQPALGLEVF 167

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            +    G  P   T    L+   +   +  G+ +H Y+IK G  +   +GN+L ++YAK 
Sbjct: 168 VEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL 227

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYAL-HGLGKGALLLFEEMKREGFAPDDISILGV 571
           GS+D A + F  I ++++++W  M+SA A      +  L LF +M  +G  P++ ++  V
Sbjct: 228 GSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSV 287

Query: 572 LQAC 575
           +  C
Sbjct: 288 MSLC 291



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 18/204 (8%)

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
           D ++ M + ++    G       +  LL        L   R++H +  KTG  AD+ V  
Sbjct: 62  DVQEAMTMLTE----GKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVAT 117

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           +L+  Y +CG+   A ++F G+ +R++V+W A+++ Y L+      L +F EM   G  P
Sbjct: 118 SLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQI------YGLRPILEHFACMVDLLGRAGRL 617
              ++   L AC+ S       C  +  +Q+      YG   I      +  L  + G L
Sbjct: 178 SHYTLGATLNACLAS-------CDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSL 230

Query: 618 SEAMNLINSSPFSESPLLWRTLVS 641
             A+      P  ++ + W T++S
Sbjct: 231 DSALRAFWRIP-EKNVITWTTMIS 253


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 189/583 (32%), Positives = 300/583 (51%), Gaps = 12/583 (2%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNV--FVGTSLISMYFHSGCFREAENVFRGL 220
           S +   CS L     G   HA  IK+  +N +  F+   L++MY        A+ +    
Sbjct: 15  SAVSTQCSRL-----GRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLT 68

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             + V     +I    + G    A   F ++     +PND+TF               GK
Sbjct: 69  PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGK 128

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           Q+H LAVK G + ++ VG +   MY K G++EEA +MFD + ERN+ +W A +S  V  G
Sbjct: 129 QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEG 188

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
               A+  F+EF   G   +       ++ C+  S L LG QLHGF ++ G+ +DV +  
Sbjct: 189 RYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVAN 248

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
            L+D Y K   +  + ++  G S      + +++  +++   D+EE   ++F + R  G+
Sbjct: 249 GLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQN--DEEEKACLVFLRARKEGI 306

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           EP     S +LS  A  + L  G+S+H  ++K     ++ VG+AL+ MY KCGSI+ A +
Sbjct: 307 EPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAER 366

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK--REGFAPDDISILGVLQACIYS 578
            F  + +R++V+WNAM+  YA  G    A+ LF+EM       AP+ ++ + VL AC  +
Sbjct: 367 AFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRA 426

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           G    G+ +F  +   YG+ P  EH+AC+VDLLGRAG + +A   I   P   +  +W  
Sbjct: 427 GSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGA 486

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+  SK+   S+   +A+  L +L+P D+G+ +L+SNM+A  G  +EA  VR  M D+ +
Sbjct: 487 LLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGI 546

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            K AGCSWI   + +H F A    H  + EI + L  L  EM+
Sbjct: 547 KKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEME 589



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 248/508 (48%), Gaps = 28/508 (5%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           N    LV+ ++ +   +LG+A HA ++K+  +   +F  N+L+N+Y+K +R + AQ L  
Sbjct: 7   NSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS 66

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
               RS +TWT+LI G + +G + S L    +M R   + N+ T     +A   L   + 
Sbjct: 67  LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+HA A+K+G  ++VFVG S   MY  +G   EA  +F  +  +++   N  +     
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVL 186

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  + A   F+      +EPN  TF   ++ C     +  G+QLHG  ++ G   ++SV
Sbjct: 187 EGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSV 246

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N ++  YGK      +E +F  IS+ N +SW ++I  YV++    KA   FL     GI
Sbjct: 247 ANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGI 306

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
                 +++V+  C+  S LE+G  +H  A+K   + ++ +G+ALVD+Y K G ++ A  
Sbjct: 307 EPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAER 366

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG---MEPDPVTFSRLLSLS 474
             D    +    +NA++ G+  +    + D+ V    +   G   + P+ VTF  +LS  
Sbjct: 367 AFDEMPERNLVTWNAMIGGYAHQ---GQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSAC 423

Query: 475 ASQACL---------VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           +    +         +RGR    Y I+ G      V    + +  + G ++ A+Q  K +
Sbjct: 424 SRAGSVNVGMEIFESMRGR----YGIEPGAEHYACV----VDLLGRAGMVEQAYQFIKKM 475

Query: 526 SDRDIVS-WNAMLSAYALHG---LGKGA 549
             R  VS W A+L A  + G   LGK A
Sbjct: 476 PIRPTVSVWGALLGASKMFGKSELGKVA 503



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 1/112 (0%)

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIF 522
           P + + L+  + S  C   GR+ HA  IKT        + N L+ MY+K    + A  + 
Sbjct: 6   PNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLL 65

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
               +R +V+W A+++    +G    AL  F  M+R+   P+D +     +A
Sbjct: 66  SLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKA 117


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 195/673 (28%), Positives = 338/673 (50%), Gaps = 8/673 (1%)

Query: 77  GQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           G+ VHA   K G +  D F  N+L+++Y +  R+D A+K+F+GM  R+ ++W +L+    
Sbjct: 82  GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA 141

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           D      +     +        +E T   +L  C+ L     G  +H  A+KSG++    
Sbjct: 142 DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPR 201

Query: 196 VGTSLISMYFHSGCFREAENVFRGL---AYKDVRCVNFMILEYNKAGESEMAFHVF--VH 250
           V   L+ MY   G   +AE  F      A ++V   N M+  Y + GE+  AF +   + 
Sbjct: 202 VSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQ 261

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHG 309
           +       ++ T  +V+ VC     + + ++LH   V+ G+ +    V NA++  YG+ G
Sbjct: 262 MEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCG 321

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD-LGICCDSSCLATVI 368
               A R+FD I  + + SW ALI  + ++G    AI  F E  +  G   D   + +++
Sbjct: 322 CLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLL 381

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C    +L  G   HGF +++G   D  +  +L+ +Y + G    AR+L D    K   
Sbjct: 382 LACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEV 441

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N +++G+ +     E   +    Q +  G  P  +  +  L   +    +  G+ +H 
Sbjct: 442 SWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHC 501

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           +++K     D  + +++I MY+KCGS+D A   F  +  +D VSW  M++ YA++G GK 
Sbjct: 502 FALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKE 561

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A+ L+++M REG  PD  + LG+L AC ++G+ E G+C F E+  +  +   LEH+AC++
Sbjct: 562 AVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVI 621

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
            +L RAGR ++A+ L+   P      +  +++S   +    +     + +LL+LEP  A 
Sbjct: 622 GMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAE 681

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            ++L SNMYAG    DE  KVR  + D  ++KE GCSWI+I  K++ FVA     PE  +
Sbjct: 682 HYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHK 741

Query: 729 IYSKLDLLNDEMK 741
           +      L ++++
Sbjct: 742 VRKMWYSLEEKIR 754



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 188/378 (49%), Gaps = 17/378 (4%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLL--SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
           N ++ + ++AG    A  +   LL  S    P+ +T    +  C  +    +G+Q+H +A
Sbjct: 34  NGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGD----DGRQVHAVA 89

Query: 287 VKFGVVR-EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
            K G+   +  VGN++V+MYG+ G  ++AE++F+ ++ RNL+SW AL++       G + 
Sbjct: 90  AKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLEL 149

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
               LE L      D + L TV+  C+  +  E G  +HG A+K G+ +  R+   LVD+
Sbjct: 150 FRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDM 209

Query: 406 YAKGGDLKSAR---MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           YAK G++  A    +     + +    +N +L G+           ++   Q    G+  
Sbjct: 210 YAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPA 269

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQI 521
           D +T   +L + +    L + R LHA+ ++ G +    +V NALI  Y +CG +  A ++
Sbjct: 270 DEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRV 329

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE-GFAPDDISILGVLQAC----- 575
           F GI  + + SWNA++ A+A +G    A+ LF EM    G  PD  SI  +L AC     
Sbjct: 330 FDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKH 389

Query: 576 IYSGLSEGGICLFNEIEQ 593
           +  G +  G  L N +E+
Sbjct: 390 LLHGKAAHGFILRNGLEK 407



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 18/211 (8%)

Query: 61  WPQLVKIS---IGSGDL---KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQK 114
           WP L+  +   +   +L   +LG+ +H F LK+    D+F ++++I++Y+K   +D A+ 
Sbjct: 474 WPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARV 533

Query: 115 LFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SL 171
            FD +  + A++WT +I GY  +G  +  +G+   M R   + +  T   +L AC    +
Sbjct: 534 FFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGM 593

Query: 172 LEDRI--FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCV 228
           LED +  F E  +   I++  E+   V    I M   +G F +A  +   +  + D + +
Sbjct: 594 LEDGLCFFQEMRNLPKIEAKLEHYACV----IGMLSRAGRFADAVALMEVMPEEPDAKIL 649

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           + ++   +  GE E+   V   LL  + EP+
Sbjct: 650 SSVLSACHMHGEVELGKKVADKLL--ELEPH 678


>gi|242073178|ref|XP_002446525.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
 gi|241937708|gb|EES10853.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
          Length = 910

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 202/711 (28%), Positives = 360/711 (50%), Gaps = 49/711 (6%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF---NRLDVAQKLFDGMLVRSAITWT 128
           G L+ G++VH +++K+G ++DT   N L+++YAK      +D A + F  +  +  ++W 
Sbjct: 195 GHLRTGRSVHGYVVKTGLESDTLCGNALVSMYAKCGGSRAMDDAHRAFSSIRCKDVVSWN 254

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE-DRIFGEQIHAFAIK 187
           S+I GY+++  ++  L +   M       N  T + IL  CS  E  R  G+++H+F ++
Sbjct: 255 SVIAGYIENRLFQEALALFGQMTSQGSLPNYSTVASILPVCSFTEFGRYHGKEVHSFVVR 314

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G E +V V  +L++ Y      +  E++F  +  +D+   N +I  Y   G    A  +
Sbjct: 315 HGLEMDVSVSNALMTHYSKVLEVKAVESIFMSMDVRDIVSWNTIIAGYVMNGYHYRALGL 374

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMYG 306
           F  LLS+   P+  +F ++++ C +   V+ G  +HG  ++  V+ +E S+ NA+VT Y 
Sbjct: 375 FHELLSTGIAPDSVSFISLLTACAQVGDVKAGMGVHGYILQRPVLLQETSLMNALVTFYS 434

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC------D 360
                ++A R F  I  ++ ISW A++S      H  + I  F  F+ +   C      D
Sbjct: 435 HCDRFDDAFRAFTDILNKDSISWNAILSA---CAHSEQHIEKF--FVLMSEMCRGVNQWD 489

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  +  VI   + C  +++  + HG++++ GY  +  +  A++D Y K G    A +L  
Sbjct: 490 SVTVLNVIHVSTFC-GIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDANILFR 548

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMV-----------------------------L 451
               + T   N ++S +++    ++ +V+                              L
Sbjct: 549 NHGGRNTVTDNIMISCYLKNNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNHMDDQAFSL 608

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           F+  +  G++PD V+ + +L        +   R  HAY ++     D+ +  AL+  Y+K
Sbjct: 609 FNHLQSEGLKPDLVSITNILEACIHLCSVQLVRQCHAYMLRASLE-DIHLEGALVDAYSK 667

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           CG+I  A+ IF+ +S +D+V++ AM+  YA+HG+ + A+ LF +M +    PD + +  +
Sbjct: 668 CGNITNAYNIFE-VSSKDLVTFTAMIGCYAMHGMAEKAVELFSKMIKLDIRPDHVVLTTL 726

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA-MNLINSSPFS 630
           L AC ++GL + GI +F  I +I+ + P  EH+ACMVDLL R+G L +A M  ++  P +
Sbjct: 727 LSACSHAGLVDAGIKIFKSIGEIHRVVPTAEHYACMVDLLARSGHLQDAYMFALDMPPHA 786

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
            +   W +L+   K+    K   LA+ +L  +E  D G+++++SN+YA     D    VR
Sbjct: 787 VNANAWSSLLGACKVHGEIKIGQLAADQLFSMEEGDIGNYVIMSNIYAADEKWDGVEHVR 846

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             M    + K AGCSWIE+D   H F AS  +H +   IY  L  L  ++K
Sbjct: 847 KLMKSKDMKKPAGCSWIEVDKTRHLFKASDTNHQDRSCIYDMLGSLYQQIK 897



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 170/680 (25%), Positives = 297/680 (43%), Gaps = 63/680 (9%)

Query: 68  SIGSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAK-FNRLDVAQKLFDGMLVRSAI 125
           ++  G   L + +H   +KSG   +    A  +++ Y +    L  A  +FD M    A+
Sbjct: 84  ALPGGGGALARCLHGLAVKSGRVASSATVAKAVMDAYGRRLGSLADALLVFDEMARPDAV 143

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRIFGEQI 181
            W  LI      G +E    +   M       +      T +VI+ AC+       G  +
Sbjct: 144 CWNILITACSRRGLFEDAFVLFRSMLSCGVVEQSMPTAVTVAVIVPACAKWGHLRTGRSV 203

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFR---EAENVFRGLAYKDVRCVNFMILEYNKA 238
           H + +K+G E++   G +L+SMY   G  R   +A   F  +  KDV   N +I  Y + 
Sbjct: 204 HGYVVKTGLESDTLCGNALVSMYAKCGGSRAMDDAHRAFSSIRCKDVVSWNSVIAGYIEN 263

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVC-YENLGVEEGKQLHGLAVKFGVVREISV 297
              + A  +F  + S    PN  T  +++ VC +   G   GK++H   V+ G+  ++SV
Sbjct: 264 RLFQEALALFGQMTSQGSLPNYSTVASILPVCSFTEFGRYHGKEVHSFVVRHGLEMDVSV 323

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA++T Y K    +  E +F ++  R+++SW  +I+GYV +G+  +A+  F E L  GI
Sbjct: 324 SNALMTHYSKVLEVKAVESIFMSMDVRDIVSWNTIIAGYVMNGYHYRALGLFHELLSTGI 383

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSAR 416
             DS    +++  C+   +++ G+ +HG+ ++    L +  L  ALV  Y+       A 
Sbjct: 384 APDSVSFISLLTACAQVGDVKAGMGVHGYILQRPVLLQETSLMNALVTFYSHCDRFDDAF 443

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
                   K +  +NAILS          E   VL S+      + D VT   ++ +S  
Sbjct: 444 RAFTDILNKDSISWNAILSACAHS-EQHIEKFFVLMSEMCRGVNQWDSVTVLNVIHVST- 501

Query: 477 QACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCG---------------------- 513
             C ++  R  H +S++ GY  +  V NA++  Y KCG                      
Sbjct: 502 -FCGIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDANILFRNHGGRNTVTDNI 560

Query: 514 ---------SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
                     I+ A  IF  ++++D+ SWN M+  YA + +   A  LF  ++ EG  PD
Sbjct: 561 MISCYLKNNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNHMDDQAFSLFNHLQSEGLKPD 620

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQI--YGLRPILEHF---ACMVDLLGRAGRLSE 619
            +SI  +L+ACI+       +C    + Q   Y LR  LE       +VD   + G ++ 
Sbjct: 621 LVSITNILEACIH-------LCSVQLVRQCHAYMLRASLEDIHLEGALVDAYSKCGNITN 673

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKL--MANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
           A N+   S  S+  + +  ++    +  MA     + +    LD+ P       L+S   
Sbjct: 674 AYNIFEVS--SKDLVTFTAMIGCYAMHGMAEKAVELFSKMIKLDIRPDHVVLTTLLSAC- 730

Query: 678 AGQGMLDEAAKVRTTMNDLR 697
           +  G++D   K+  ++ ++ 
Sbjct: 731 SHAGLVDAGIKIFKSIGEIH 750


>gi|297827565|ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 836

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 199/655 (30%), Positives = 347/655 (52%), Gaps = 24/655 (3%)

Query: 57  LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           L+N  P + K+        + + +H  ++K G  +    ++ LI++Y K   L  A+ +F
Sbjct: 204 LYNLIPAVSKLEKND----VCRCLHGLVIKKGFTSAF--SSGLIDMYCKCADLYAAECVF 257

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           + +  +   +W +++  Y  +G +E VL +   M   + + N+   +  L+A + + +  
Sbjct: 258 EEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGNLE 317

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G  IH + ++ G  +++ V TSLI+MY   G    AE +F  +  +DV   + MI  + 
Sbjct: 318 KGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASFE 377

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           +AG+ + A  +F  ++ + F+PN  T T+V+  C        GK +H  A+K  V  E+ 
Sbjct: 378 QAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELE 437

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
              A+++MY K G+     + F+ +  ++ I++ AL  GY + G   KA + +      G
Sbjct: 438 TATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHG 497

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +C DS  +  ++  C++CS+   G  ++G  IKHG+ S+  +  AL+D++ K   L +A+
Sbjct: 498 VCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAK 557

Query: 417 MLLD--GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            L D  GF  K T  +N +++G++  +    E+ +  F Q ++   +P+ VTF  ++  +
Sbjct: 558 SLFDKCGFE-KSTVSWNIMMNGYL--LHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAA 614

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           A  A L  G S+H+  I+ G+ +   VGN+L+ MYAKCG I+ + + F  I ++++VSWN
Sbjct: 615 AELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVSWN 674

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
            MLSAYA HGL   A+ LF  M+     PD +S L VL AC ++GL+E G  +F E+E+ 
Sbjct: 675 TMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLAEEGKRIFKEMEER 734

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           + +   +EH+ACMVDLLG++G   EA+ ++       S  +W  L++ S++  N   S  
Sbjct: 735 HKIEAKVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGVWGALLNSSRMHCNLWLSNA 794

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           A  +L+ LEP       L  + Y     L EA  V       R+ K   CSWI++
Sbjct: 795 ALCQLVKLEP-------LNPSHYGQDQRLGEANNVS------RIKKVPACSWIQV 836



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 165/659 (25%), Positives = 307/659 (46%), Gaps = 28/659 (4%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K   GS D + G  +H  + + G ++D +    L+ +Y K   L  A+++FD M V+  
Sbjct: 107 LKACAGSMDFEEGLRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDI 166

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           +TW +++ G   +G     L +  DM+ S    +  +   ++ A S LE       +H  
Sbjct: 167 VTWNTMVSGLAQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGL 226

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            IK GF +    G  LI MY        AE VF  +  KD      M+  Y   G  E  
Sbjct: 227 VIKKGFTSAFSSG--LIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEV 284

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             +F  + + D   N     + +        +E+G  +H   V+ G++ +ISV  +++ M
Sbjct: 285 LELFDVMRNYDVRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINM 344

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  E AE++F  I +R+++SW+A+I+ + ++G   +A++ F + +      ++  L
Sbjct: 345 YSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTL 404

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
            +V+ GC+  +   LG  +H +AIK    S++   TA++ +YAK G         +    
Sbjct: 405 TSVLQGCAGVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPI 464

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    FNA+  G+ +    D      ++   +L G+ PD  T   +L   A  +   RG 
Sbjct: 465 KDAIAFNALAQGYTQ--IGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGS 522

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            ++   IK G+ ++  V +ALI M+ KC ++  A  +F     ++  VSWN M++ Y LH
Sbjct: 523 CVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLH 582

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G  + A+  F +MK E F P+ ++ + +++A         G+ + + + Q +G       
Sbjct: 583 GQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAELAALSLGMSVHSSLIQ-FGFCSHTPV 641

Query: 604 FACMVDLLGRAGRLSEA----MNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASK 657
              +VD+  + G +  +    + + N +  S     W T++S   +  +AN   S+  S 
Sbjct: 642 GNSLVDMYAKCGMIESSKKCFIEIRNKNMVS-----WNTMLSAYAAHGLANCAVSLFLSM 696

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           +  +L+P D+ SF+ V +     G+ +E  ++   M +            +I++K+ H+
Sbjct: 697 QENELKP-DSVSFLSVLSACRHAGLAEEGKRIFKEMEERH----------KIEAKVEHY 744



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/586 (25%), Positives = 286/586 (48%), Gaps = 14/586 (2%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           N    L+++     + +L   +H  L+ +G +      N LIN Y+ F R D+++K+ D 
Sbjct: 3   NTCTTLLRMLRECKNFRLLLQIHGSLIVAGLKPH----NQLINAYSLFQRPDLSRKIVDS 58

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK---FNEHTCSVILEACSLLEDR 175
           +     + W S+I+GY   G ++  L +    Y SE K    +++T +  L+AC+   D 
Sbjct: 59  VPYPGVVLWNSMIRGYTRAGLHKEALEVF--GYMSEAKGIDPDKYTFTFALKACAGSMDF 116

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G +IH    + GFE++V++GT+L+ MY  +G    A  VF  +  KD+   N M+   
Sbjct: 117 EEGLRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGL 176

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G S  A  +F  + SS  + +  +  N+I    +    +  + LHGL +K G     
Sbjct: 177 AQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSAF 236

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           S G  ++ MY K      AE +F+ +  ++  SW  +++ Y  +G   + +  F    + 
Sbjct: 237 SSG--LIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNY 294

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            +  +    A+ +   +   NLE G+ +H + ++ G +SD+ + T+L+++Y+K G+L+ A
Sbjct: 295 DVRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELA 354

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             L      +    ++A+++ F +  A   ++ + LF        +P+ VT + +L   A
Sbjct: 355 EQLFIKIKDRDVVSWSAMIASFEQ--AGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCA 412

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
             A    G+S+H Y+IK    +++    A+I+MYAKCG      + F+ +  +D +++NA
Sbjct: 413 GVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNA 472

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           +   Y   G    A  +++ MK  G  PD  +++G+LQ C        G C++ +I + +
Sbjct: 473 LAQGYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIK-H 531

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           G          ++D+  +   L+ A +L +   F +S + W  +++
Sbjct: 532 GFDSECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMN 577


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 178/571 (31%), Positives = 306/571 (53%), Gaps = 10/571 (1%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H   +K+G   ++FV TSL++ Y   G  ++A ++F  +  K+V     +I  Y    +
Sbjct: 100 LHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQ 159

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A  VFV +L +   P+ YT   +++ C  +   + G Q+HG  +K+  +   S+GN+
Sbjct: 160 LLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNS 219

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR-SGHGGKAINGFLEFLDLGICC 359
           +  MY K G  E A R F  + ++N+I+WT +IS       +    +  FL+ L  G+  
Sbjct: 220 LCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLP 279

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   L +V+  C    +L LG Q+  F  K G  +++ +  + + +Y + G+   A    
Sbjct: 280 NEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFF 339

Query: 420 DGFSCKYTAEFNAILSGF---MEKIADDEE------DVMVLFSQQRLAGMEPDPVTFSRL 470
           +         +NA++SG+   ME   DD          + +F   + + M+PD  TFS +
Sbjct: 340 EEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSI 399

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           LS+ +S   L +G  +HA +IKTG+ +DV+V +AL+ MY KCG I+ A + F  +S R +
Sbjct: 400 LSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTL 459

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           V+W +M+S Y+ HG  + A+ LFE+M+  G  P++I+ + VL AC Y+GL+E     F+ 
Sbjct: 460 VTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDM 519

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           +++ Y + PI++H+ CMVD+  R GRL +A   I  + F  +  +W +LV+  +   N +
Sbjct: 520 MKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNME 579

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            +  A+ RL++L PK   +++L+ NMY       + A+VR  M    L      SWI I 
Sbjct: 580 LAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIK 639

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            K++ F A+ K H  S+E+Y  L+ L ++ K
Sbjct: 640 DKVYFFKANDKTHELSDELYQLLENLLEKAK 670



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 242/497 (48%), Gaps = 20/497 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ + + +G L   +A+H  ++K+G+  D F A +L+N Y +      A+ LFD M  ++
Sbjct: 84  LLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKN 143

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +TWT+LI GY  +      L +  +M  +    + +T   +L ACS   +   G Q+H 
Sbjct: 144 VVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHG 203

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE-YNKAGESE 242
           + IK    +   +G SL  MY  SG    A   FR +  K+V     MI         +E
Sbjct: 204 YTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTE 263

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           +   +F+ +L     PN++T T+V+S+C   L +  GKQ+     K G    I V N+ +
Sbjct: 264 LGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTM 323

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVR-----------SGHGGKAINGFLE 351
            +Y + G ++EA R F+ + + ++I+W A+ISGY +              G +A+  F  
Sbjct: 324 YLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRN 383

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
                +  D    ++++  CS    LE G Q+H   IK G+LSDV + +ALV++Y K G 
Sbjct: 384 LKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           ++ A       S +    + +++SG+ +      ++ + LF   R AG+ P+ +TF  +L
Sbjct: 444 IEDATKAFVEMSIRTLVTWTSMISGYSQH--GRPQEAIQLFEDMRFAGVRPNEITFVCVL 501

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFK--GISD 527
           S + S A L      +   +K  Y  + IV +   ++ M+ + G +D AF   +  G   
Sbjct: 502 S-ACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEP 560

Query: 528 RDIVSWNAMLSAYALHG 544
            + + W+++++    HG
Sbjct: 561 NEAI-WSSLVAGCRSHG 576



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 171/331 (51%), Gaps = 26/331 (7%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  ++ VC E   +   + LHG  VK G   ++ V  ++V  Y + G S++A  +FD + 
Sbjct: 81  YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMP 140

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           E+N+++WTALI+GY  +    +A+  F+E L+ G       L  +++ CS  +N +LG Q
Sbjct: 141 EKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQ 200

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA----RMLLDGFSCKYTAEFNAILSGFM 438
           +HG+ IK+  LS   +G +L  +YAK G L+SA    RM+ D     +T   +A      
Sbjct: 201 VHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISA------ 254

Query: 439 EKIADDE---EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
              A+DE   E  + LF    + G+ P+  T + ++SL  ++  L  G+ + A+  K G 
Sbjct: 255 --CAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGC 312

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA---------LHGLG 546
             ++ V N+ + +Y + G  D A + F+ + D  I++WNAM+S YA         LH   
Sbjct: 313 QTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARS 372

Query: 547 KG--ALLLFEEMKREGFAPDDISILGVLQAC 575
           +G  AL +F  +KR    PD  +   +L  C
Sbjct: 373 RGFQALKVFRNLKRSAMKPDLFTFSSILSVC 403



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 18/180 (10%)

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           LL +      L   R+LH + +KTG +AD+ V  +L+  Y +CG+   A  +F  + +++
Sbjct: 84  LLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKN 143

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           +V+W A+++ Y ++     AL +F EM   G  P   ++  +L AC  S  ++ G     
Sbjct: 144 VVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLG----- 198

Query: 590 EIEQIYGLRPILEHFACMVDLLG--------RAGRLSEAMNLINSSPFSESPLLWRTLVS 641
              Q++G    +++ A  +  +G        ++G L  AM      P  ++ + W T++S
Sbjct: 199 --SQVHGY--TIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVP-DKNVITWTTMIS 253


>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 189/651 (29%), Positives = 335/651 (51%), Gaps = 49/651 (7%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G  D+  G+  H  +LK G  ++ + +N L+ +Y K    + A ++F+G++  + +T+T+
Sbjct: 150 GLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTT 209

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL------------LEDRIF 177
           ++ G       +  L +   M R     +  + S IL  C+             L     
Sbjct: 210 MMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQ 269

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+QIH  A+K GFE ++ +  SL+ MY  +G    AENVF  L    V   N MI  Y  
Sbjct: 270 GKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGN 329

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
             +SE A   F  +    +EP+D T+ N+++ C ++  V+ G+Q+               
Sbjct: 330 RCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQI--------------- 374

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
                               FD +S  +LISW A++SGY +S   G+A+  F +      
Sbjct: 375 --------------------FDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQ 414

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D + LA ++  C+    LE G Q+H  + K G+  DV + ++L+++Y+K G ++ ++ 
Sbjct: 415 NPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKH 474

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +    S      +N++++GF   I   E+D +  F + R  G  P   +F+ + S  A  
Sbjct: 475 VFSKLSELDVVCWNSMIAGF--SINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKL 532

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           + L +G+ +HA  IK GY  +V VG++L+ MY KCG +  A   F  +  ++IV+WN M+
Sbjct: 533 SSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMI 592

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             YA +G G  A+ L+++M   G  PDDI+ + VL AC +S L + G+ +F+ + Q + +
Sbjct: 593 HGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEV 652

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P L+H+ C++D LGR GR +E   ++++ P+ +  ++W  ++S  ++ AN   +  A++
Sbjct: 653 VPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAE 712

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            L  L P+++  ++L++NMY+  G  D+A  VR  M+D ++ K+ G S  E
Sbjct: 713 ELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYSRSE 763



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 139/557 (24%), Positives = 249/557 (44%), Gaps = 81/557 (14%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG---- 118
            L++  I +  L   + +HA + +    +DTF  N+LI+LY+K N++  A  +FD     
Sbjct: 10  NLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHK 69

Query: 119 ---------------------------MLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
                                      M  R+ ++  ++I   + +G     L     M 
Sbjct: 70  NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129

Query: 152 RSEEKFNEH-TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
             E     H T + +  AC  L+D   G + H   +K GF++N++V  +L+ MY   G  
Sbjct: 130 VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLN 189

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
            +A  VF G+   +      M+   ++  + +    +F  +L      +  + + ++ +C
Sbjct: 190 EDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVIC 249

Query: 271 YE--NLGV----------EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
            +  + GV           +GKQ+H LAVK G  R++ + N+++ MY K G  + AE +F
Sbjct: 250 AKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVF 309

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           + + + +++SW  +ISGY       KA+  F        CC                   
Sbjct: 310 ENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQ----CC------------------- 346

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
                       GY  D      ++    K GD+K  R + D  S      +NAILSG+ 
Sbjct: 347 ------------GYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYN 394

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
           +  + D  + + LF + +     PD  T + +LS  A    L  G+ +HA S K G+  D
Sbjct: 395 Q--SADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDD 452

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           V V ++LI +Y+KCG ++ +  +F  +S+ D+V WN+M++ ++++ L + AL  F+ M++
Sbjct: 453 VYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQ 512

Query: 559 EGFAPDDISILGVLQAC 575
            GF P + S   +  +C
Sbjct: 513 FGFFPSEFSFATIASSC 529



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 220/463 (47%), Gaps = 54/463 (11%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF-VHL 251
           N+F   +++S +  S   + A  +F  +  ++   +N +I    K G    A   + + +
Sbjct: 70  NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           +    +P+  TF  V S C     V  G++ HGL +K G    I V NA++ MY K G++
Sbjct: 130 VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLN 189

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+A R+F+ I E N +++T ++ G  ++    + +  F   L  GIC DS  L+T++  C
Sbjct: 190 EDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVIC 249

Query: 372 S------VC------SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +      VC      S    G Q+H  A+KHG+  D+ L  +L+D+YAK GD+ SA  + 
Sbjct: 250 AKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVF 309

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +         +N ++SG+  +   D E  +  F + +  G EPD VT+  +L+     AC
Sbjct: 310 ENLDKHSVVSWNIMISGYGNRC--DSEKALECFQRMQCCGYEPDDVTYINMLT-----AC 362

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
                      +K+G   DV VG                 QIF  +S   ++SWNA+LS 
Sbjct: 363 -----------VKSG---DVKVGR----------------QIFDCMSSPSLISWNAILSG 392

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y        A+ LF +M+ +   PD  ++  +L +C   GL E G  + + + Q  G   
Sbjct: 393 YNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQV-HAVSQKLGFYD 451

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL-WRTLVS 641
            +   + ++++  + G++  + ++   S  SE  ++ W ++++
Sbjct: 452 DVYVASSLINVYSKCGKMEVSKHVF--SKLSELDVVCWNSMIA 492



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 46/377 (12%)

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E       N++  C  N  +   K +H    +F +  +  + N ++ +Y K      A  
Sbjct: 2   EVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHH 61

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEF------------------------ 352
           +FD I  +N+ S+ A++S + +S +   A   FL+                         
Sbjct: 62  VFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQA 121

Query: 353 ---LDLGICCDSS-----CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
               DL +  +S        ATV   C    ++  G + HG  +K G+ S++ +  AL+ 
Sbjct: 122 LDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLC 181

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y K G  + A  + +G        F  ++ G  +   +  ++ + LF      G+  D 
Sbjct: 182 MYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQ--TNQVKEGLELFRLMLRKGICVDS 239

Query: 465 VTFSRLLSLSASQACL------------VRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
           V+ S +L + A                  +G+ +H  ++K G+  D+ + N+L+ MYAK 
Sbjct: 240 VSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKT 299

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G +D A  +F+ +    +VSWN M+S Y      + AL  F+ M+  G+ PDD++ + +L
Sbjct: 300 GDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINML 359

Query: 573 QACIYSGLSEGGICLFN 589
            AC+ SG  + G  +F+
Sbjct: 360 TACVKSGDVKVGRQIFD 376



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%)

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           ME   +    LL    +   L   + +HA   +    +D  + N LI +Y+KC  I  A 
Sbjct: 1   MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAH 60

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +F  I  ++I S+NA+LSA+      + A  LF +M
Sbjct: 61  HVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQM 97


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 191/641 (29%), Positives = 343/641 (53%), Gaps = 10/641 (1%)

Query: 70   GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
             S +   G+++HA ++K    +    A  L+++YAK   L+ A  +F  M  R+ ++W S
Sbjct: 369  NSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNS 428

Query: 130  LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV--ILEACSLLEDRIFGEQIHAFAIK 187
            +I GY  +G +E+ +   CDM    E F+    S+  IL ACS LE  + G+  HAF+ +
Sbjct: 429  MISGYGHNGLWEASMDAFCDM--QFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFR 486

Query: 188  SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
              F++N+ +  +L++ Y   G    +  +F+ +  ++    N +I      G+++ A  +
Sbjct: 487  KEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVAL 546

Query: 248  FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
               +     E +  T  ++I +C     + +G  LHG A+K G   ++S+ NA+++MY  
Sbjct: 547  LHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFN 606

Query: 308  HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
             G     + +F+ +  R+++SW ALI+GY       + +  F + +  G         T+
Sbjct: 607  CGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREG---QKPNYVTL 663

Query: 368  IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
            ++    C  L  G  +H FA++ G + +  + T+L+ +YA+  ++ S   L +    +  
Sbjct: 664  LNLLPSCRTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDI 723

Query: 428  AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
            A +NAI+S +++    + ++ +  F +   A +EPD +TF  L+S     + L    S+ 
Sbjct: 724  ALWNAIMSVYVQ--TKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVM 781

Query: 488  AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            AY I+ G+   +++ NALI ++A+CG+I  A +IF+G+S +D VSW+ M++ Y LHG  +
Sbjct: 782  AYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSE 841

Query: 548  GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
             AL L  +M+  G  PD I+   VL AC + G  + G  +FN + +  G+   +EH+ACM
Sbjct: 842  AALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVE-EGVPRRMEHYACM 900

Query: 608  VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
            VDLLGR G+L+EA + +   P   S  L  +L+    +  N K     S  L +L+PK++
Sbjct: 901  VDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFELDPKNS 960

Query: 668  GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            GS++++ N+YA  G   +A +VR+ M + +L K  G S +E
Sbjct: 961  GSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVE 1001



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 267/515 (51%), Gaps = 2/515 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K     G + + + VH  +L++  + +      L++ YAK  R+  A+ + D + 
Sbjct: 158 FPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKIS 217

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               +TW +LI GY  +G  + V  +   +     K N  T + I+  C+ ++    G+ 
Sbjct: 218 QPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKS 277

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH F +KSGF ++ F+  +LISMY   G    A ++F   A K+V   N MI  Y +  +
Sbjct: 278 IHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQK 337

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           S  AF +F  +L ++ +PN  TF ++I  C  +     GK LH   +K+ +  ++SV  A
Sbjct: 338 SSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATA 397

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +++MY K G    A+ +F  +  RNL+SW ++ISGY  +G    +++ F +    G   D
Sbjct: 398 LLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPD 457

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +  +  ++  CS    + LG   H F+ +  + S++ +  AL+  Y+  G L S+  L  
Sbjct: 458 AISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQ 517

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               +    +N ++SG +     D +  + L  + +   ME D VT   ++ +      L
Sbjct: 518 KMPLRNAISWNTLISGCVHN--GDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENL 575

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
           ++G +LH Y+IKTG+A DV + NALI+MY  CG I+    +F+ +  R IVSWNA+++ Y
Sbjct: 576 IQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGY 635

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             H L    +  F +M REG  P+ +++L +L +C
Sbjct: 636 RFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSC 670



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/549 (24%), Positives = 262/549 (47%), Gaps = 12/549 (2%)

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
           ++A   F+ +   S      +I+   D G +E VL +           ++ T   +++AC
Sbjct: 106 ELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKAC 165

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVN 229
           + L      E +H   +++ FE N+ + T+L+  Y  +G   +A  V   ++  D+   N
Sbjct: 166 TALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWN 225

Query: 230 FMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
            +I  Y+  G  +  F V   +     +PN  TF ++I +C     ++ GK +HG  VK 
Sbjct: 226 ALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKS 285

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           G   +  +  A+++MY   G    A  +FD+ +E+N++ W ++IS Y ++    +A   F
Sbjct: 286 GFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMF 345

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
            + L   +  +     ++I  C   +N   G  LH   +K+   S + + TAL+ +YAK 
Sbjct: 346 QQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKL 405

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           GDL SA  +      +    +N+++SG+        E  M  F   +  G +PD ++   
Sbjct: 406 GDLNSADFIFYQMPRRNLLSWNSMISGYGHN--GLWEASMDAFCDMQFEGFDPDAISIVN 463

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +LS  +    ++ G++ HA+S +  + +++ + NAL+  Y+ CG +  +F++F+ +  R+
Sbjct: 464 ILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRN 523

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLF 588
            +SWN ++S    +G  K A+ L  +M++E    D ++++ ++  C +   L +G     
Sbjct: 524 AISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQG----- 578

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
                ++G   I   FAC V L+     +      IN+  F    + WR++VS + L+  
Sbjct: 579 ---MTLHGY-AIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITG 634

Query: 649 SKFSILASK 657
            +F  L ++
Sbjct: 635 YRFHYLQNE 643



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 215/452 (47%), Gaps = 14/452 (3%)

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           +V    I   FH G    A + F  +    V   N MI      G  E    V++     
Sbjct: 90  YVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVL 149

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
               +D+TF  VI  C     V   + +H + ++      + +  A+V  Y K G   +A
Sbjct: 150 GCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKA 209

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
             + D IS+ +L++W ALISGY  +G   +      +  ++G+  + S  A++I  C+  
Sbjct: 210 RLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRM 269

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
             L++G  +HGF +K G+ SD  L  AL+ +YA GG+L  AR L D  + K    +N+++
Sbjct: 270 KCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMI 329

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           S + +     E   M  F Q   A M+P+ VTF  ++    + A    G+SLHA+ +K  
Sbjct: 330 SAYAQNQKSSEAFKM--FQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYR 387

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
             + + V  AL++MYAK G ++ A  IF  +  R+++SWN+M+S Y  +GL + ++  F 
Sbjct: 388 LDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFC 447

Query: 555 EMKREGFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           +M+ EGF PD ISI+ +L AC     I  G +        E +    +   L  F     
Sbjct: 448 DMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAF----- 502

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
                G+LS +  L    P   + + W TL+S
Sbjct: 503 -YSDCGKLSSSFKLFQKMPLRNA-ISWNTLIS 532



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 182/385 (47%), Gaps = 9/385 (2%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR-EISVGNAIVTMYGKHGMSEEAER 316
           P   +F  +  +C     +E  K L  + +   ++R E  V   I++ +   G  E A  
Sbjct: 55  PKVTSFLRLFDLCR---NIENLKPLGSVLIVRDLMRDEYVVAEFIISCF-HLGAPELALS 110

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            F+AI + ++     +I      G     +  +L+   LG   D      VI  C+    
Sbjct: 111 AFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGA 170

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           + +   +H   ++  +  ++ + TALVD YAK G +  AR++LD  S      +NA++SG
Sbjct: 171 VWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISG 230

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           +     D E  V  +  Q    G++P+  TF+ ++ L     CL  G+S+H + +K+G++
Sbjct: 231 YSLNGFDKE--VFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFS 288

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           +D  +  ALI+MYA  G++  A  +F   +++++V WN+M+SAYA +     A  +F++M
Sbjct: 289 SDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQM 348

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
            +    P+ ++ + ++  C  S     G  L   + + Y L   L     ++ +  + G 
Sbjct: 349 LKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMK-YRLDSQLSVATALLSMYAKLGD 407

Query: 617 LSEAMNLINSSPFSESPLLWRTLVS 641
           L+ A  +    P   + L W +++S
Sbjct: 408 LNSADFIFYQMP-RRNLLSWNSMIS 431


>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 198/679 (29%), Positives = 354/679 (52%), Gaps = 19/679 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G+ KLG  +H F + SG  +    +N+L+ +Y K      A  +F+ +     ++W +++
Sbjct: 91  GESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVL 150

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+ +  D    L  A  M+     F+  T +  L  C      +FG Q+H+  +K G  
Sbjct: 151 SGFEESVD---ALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLG 207

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE--MAFHVFV 249
             VF+G +L++MY   G   EA  VF  +  +D+   N MI  Y + G+     A  +FV
Sbjct: 208 CEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFV 267

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           +++      +  + T  +S C     +E G+Q+HGL  K G    +SV N +++ Y K  
Sbjct: 268 NMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCE 327

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           + ++A+ +F++IS RN++SWT +IS          A++ F      G+  +      +I 
Sbjct: 328 VPKDAKAVFESISNRNVVSWTTMISIDEED-----AVSLFNAMRVNGVYPNDVTFIGLIH 382

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             ++ + +  GL +HG  IK  +LS+  +  + + +YAK   ++ +  + +  +C+ T  
Sbjct: 383 AVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVS 442

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL--SASQACLVRGRSLH 487
           +NA++SG+ +  +  E  +  L + + +   +P+  TF  +L+   +A    L  G+S H
Sbjct: 443 WNALISGYAQNGSYKEALLTYLSAVKEI---KPNQYTFGSVLNAIAAAEDISLNHGKSCH 499

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           ++ +K G   D IV  AL+ MY K G I  + ++F    +R   +W A++SAYA HG  +
Sbjct: 500 SHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFE 559

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
             + L+ EM+REG  PD I+ L VL AC   G+ + G  +F+ + + + + P  EH++ M
Sbjct: 560 SVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIM 619

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VD+LGR GRL EA  L++  P      + ++L+   +L  N + +     RL++++P  +
Sbjct: 620 VDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHGNMEMAEKVVGRLIEMDPASS 679

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS----KLHHFVASGKDH 723
           G ++L++N+YA +G  ++ A+VR  M    + KE G SW+++ +     LH F +  K H
Sbjct: 680 GPYVLMANLYAEKGKWEKVAEVRRGMRGRGVKKEVGFSWVDVSNVDSLYLHGFSSGDKSH 739

Query: 724 PESEEIYSKLDLLNDEMKL 742
           PESE I    + L  +MK+
Sbjct: 740 PESENICKIAEFLGLQMKI 758



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D VT +  LSL A Q     G  +H +++ +G+ + V V N+L+ MY K G+   A  +F
Sbjct: 78  DEVTVA--LSLKACQGESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVF 135

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           + +S  DIVSWN +LS +        AL     M   G A D ++    L  C
Sbjct: 136 ENLSHPDIVSWNTVLSGFE---ESVDALNFARSMHYCGIAFDPVTYTSALAFC 185


>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
 gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
          Length = 721

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 191/640 (29%), Positives = 337/640 (52%), Gaps = 10/640 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           +AVH   +K G    T+  NNL+  Y     L  A+ +FD M  R+ ++W+ LI      
Sbjct: 22  RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81

Query: 138 GDYESVLGIACDMYRSEEK--FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           G     L +   M R  E+   N  T + ++  C+  +D + GEQ+HA A+K G + +  
Sbjct: 82  GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---LEYNKAGESEMAFHVFVHLL 252
           V  +L+ MY   G    +   F     + V     MI   + +  +G  + A  +F  +L
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                P + TF+ ++ V      +  GKQ+HG  VK G   + ++G A++ MYG+ G  +
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           E  R+   I   +  S T+L++ Y R+G   +A+  F + L   +  D S + +++  CS
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCS 320

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               L +  ++H +A+K+ +  D  L  A+V +Y K GD+ S+ ++ +    K T  + A
Sbjct: 321 SLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTA 380

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +L+ +++   D  ++ +  F +    G+E      + +L   ++ + L  G  +H+  +K
Sbjct: 381 LLTCYVQN--DLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVK 438

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G   D  V NAL+TMYAKCG +  A +IF  + +R I+SWNA++++++ HG    A+ L
Sbjct: 439 LGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQL 498

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+ M+ E   PDD + +G+L +C   GL   G   F +++  Y L P +EH+ CMVDL  
Sbjct: 499 FDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFA 558

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAGR S+AM  I++ P     L+W  L++  ++  N     +A+K++L+++P+D   +I+
Sbjct: 559 RAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYII 618

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
           +S+++A   M DE A+ RT ++  +L K+ G S  ++DS+
Sbjct: 619 LSSIHASIDMWDEKARNRTLLDFQQLRKDVGSS--QLDSQ 656



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 239/500 (47%), Gaps = 13/500 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D   G+ VHA  +K G   D   A  L+++YAK  R+  + + F     RS ++WTS+I 
Sbjct: 120 DAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIA 179

Query: 133 GYLDDGD---YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
             ++ GD    ++ + +   M   +      T S IL+   + E    G+Q+H   +K G
Sbjct: 180 CLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMG 239

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E +  +GT+L++MY   G   E   +   + + D      ++  Y + G +  A  VF 
Sbjct: 240 TEVDPALGTALLAMYGRCGGMDEITRLACRIRH-DAFSRTSLLTAYARNGCNMEAVRVFR 298

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +L      +    T+++ VC     +   K++H  A+K     +  + NAIVT+YGK G
Sbjct: 299 DMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCG 358

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               +E +F+ +  ++ ISWTAL++ YV++    +A+  F E +  G+     C+ +V+ 
Sbjct: 359 DIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLR 418

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS  S+L  G Q+H   +K G   D  +  ALV +YAK G ++ A  + +    +    
Sbjct: 419 ACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIIS 478

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA+++ F +    +E   + LF   +   + PD  TF  LLS S S+  LV     +  
Sbjct: 479 WNALITSFSQH--GNEVAAIQLFDMMQEEMVCPDDYTFVGLLS-SCSRMGLVAEGCEYFK 535

Query: 490 SIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG-- 544
            +KT Y  +  + +   ++ ++A+ G    A +    +    D + W A+L++  +HG  
Sbjct: 536 QMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNL 595

Query: 545 -LGKGALLLFEEMKREGFAP 563
            LG+ A     E+K E  +P
Sbjct: 596 DLGRMAAKKILEIKPEDPSP 615



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 132/273 (48%), Gaps = 2/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+++    G L++ + +H + LK+  + DT   N ++ +Y K   +  ++ +F+ +  + 
Sbjct: 315 LLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKD 374

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+WT+L+  Y+ +   +  L    +M R   + +    + +L ACS       G QIH+
Sbjct: 375 TISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHS 434

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G +++  V  +L++MY   G  + A  +F  +  + +   N +I  +++ G    
Sbjct: 435 RVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVA 494

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIV 302
           A  +F  +      P+DYTF  ++S C     V EG +    +  K+ +  ++     +V
Sbjct: 495 AIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMV 554

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
            ++ + G   +A +  DA+  + + + W AL++
Sbjct: 555 DLFARAGRFSDAMKFIDAMPCQPDQLVWEALLA 587


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 184/567 (32%), Positives = 306/567 (53%), Gaps = 9/567 (1%)

Query: 177 FGEQIHA-FAIKSGFENNVFVG--TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
           FG+ +HA F I++   N+  +    SL+ +Y   G    A N+F  +  ++V   N ++ 
Sbjct: 30  FGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMA 89

Query: 234 EYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
            Y   G       +F +++S  +  PN+Y FT  +S C     V+EG Q HGL  KFG+V
Sbjct: 90  GYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLV 149

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISER---NLISWTALISGYVRSGHGGKAINGF 349
               V +A+V MY +    E A ++ D +      ++ S+ ++++  V SG G +A+   
Sbjct: 150 CHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVL 209

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
              +D  +  D      V+  C+   +L+LGL++H   ++ G + D  +G+ L+D+Y K 
Sbjct: 210 RRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKC 269

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G++ +AR + DG   +    + A+++ +++    +E   + LF+     G  P+  TF+ 
Sbjct: 270 GEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEES--LNLFTCMDREGTLPNEYTFAV 327

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           LL+  A  A L  G  LHA   K G+   VIV NALI MY+K GSID ++ +F  +  RD
Sbjct: 328 LLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRD 387

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           I++WNAM+  Y+ HGLGK AL +F++M      P+ ++ +GVL A  + GL + G    N
Sbjct: 388 IITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLN 447

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            + + + + P LEH+ CMV LL RAG L EA N + ++      + WRTL++   +  N 
Sbjct: 448 HLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNY 507

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
                 ++ +L ++P D G++ L+SNMYA     D    +R  M +  + KE G SW++I
Sbjct: 508 DLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDI 567

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLL 736
            + +H F++ G +HPES +IY K+  L
Sbjct: 568 RNDIHVFLSEGSNHPESIQIYKKVQQL 594



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 230/483 (47%), Gaps = 19/483 (3%)

Query: 74  LKLGQAVHA-FLLKSGSQNDTF--EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           L  G+A+HA FL+++ + N +     N+L++LY K  +L +A+ LFD M +R+ ++W  L
Sbjct: 28  LPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVL 87

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           + GYL  G++  VL +  +M   +    NE+  +  L ACS       G Q H    K G
Sbjct: 88  MAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFG 147

Query: 190 FENNVFVGTSLISMY---FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
              + +V ++L+ MY    H     +  +   G    D+   N ++    ++G  E A  
Sbjct: 148 LVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVE 207

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           V   ++      +  T+  V+ +C +   ++ G ++H   ++ G++ +  VG+ ++ MYG
Sbjct: 208 VLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYG 267

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G    A  +FD +  RN++ WTAL++ Y+++G+  +++N F      G   +    A 
Sbjct: 268 KCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAV 327

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           +++ C+  + L  G  LH    K G+ + V +  AL+++Y+K G + S+  +      + 
Sbjct: 328 LLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRD 387

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG--- 483
              +NA++ G+       +   + +F     A   P+ VTF  +LS  +    +  G   
Sbjct: 388 IITWNAMICGYSHHGLGKQ--ALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYY 445

Query: 484 --RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAY 540
               +  + I+ G          ++ + ++ G +D A    K    + D+V+W  +L+A 
Sbjct: 446 LNHLMRNFKIEPGLEH----YTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNAC 501

Query: 541 ALH 543
            +H
Sbjct: 502 HVH 504



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 144/266 (54%), Gaps = 4/266 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+LG  VHA LL+ G   D F  + LI++Y K   +  A+ +FDG+  R+ + WT+L+ 
Sbjct: 236 DLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMT 295

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            YL +G +E  L +   M R     NE+T +V+L AC+ +     G+ +HA   K GF+N
Sbjct: 296 AYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKN 355

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +V V  +LI+MY  SG    + NVF  + Y+D+   N MI  Y+  G  + A  VF  ++
Sbjct: 356 HVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMV 415

Query: 253 SSDFEPNDYTFTNVISVCYENLG-VEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           S++  PN  TF  V+S  Y +LG V+EG   L+ L   F +   +     +V +  + G+
Sbjct: 416 SAEECPNYVTFIGVLSA-YSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGL 474

Query: 311 SEEAERMFDAISER-NLISWTALISG 335
            +EAE        + ++++W  L++ 
Sbjct: 475 LDEAENFMKTTQVKWDVVAWRTLLNA 500



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 197/462 (42%), Gaps = 39/462 (8%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD---GMLVRSAITWT 128
           G +K G   H  L K G     +  + L+++Y++ + +++A ++ D   G  V    ++ 
Sbjct: 131 GRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYN 190

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           S++   ++ G  E  + +   M      ++  T   ++  C+ + D   G ++HA  ++ 
Sbjct: 191 SVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRG 250

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G   + FVG+ LI MY   G    A NVF GL  ++V     ++  Y + G  E + ++F
Sbjct: 251 GLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLF 310

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +      PN+YTF  +++ C     +  G  LH    K G    + V NA++ MY K 
Sbjct: 311 TCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKS 370

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  + +  +F  +  R++I+W A+I GY   G G +A+  F + +    C +      V+
Sbjct: 371 GSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVL 430

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
              S      LGL   GF   +  + + ++                    L+ ++C    
Sbjct: 431 SAYS-----HLGLVKEGFYYLNHLMRNFKIEPG-----------------LEHYTCMV-- 466

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
              A+LS     + D+ E+ M      +   ++ D V +  LL+          GR + A
Sbjct: 467 ---ALLS--RAGLLDEAENFM------KTTQVKWDVVAWRTLLNACHVHRNYDLGRRI-A 514

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
            S+      DV     L  MYAK    DG   I K + +R+I
Sbjct: 515 ESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNI 556



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 9/165 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+    G   L+ G  +HA + K G +N     N LIN+Y+K   +D +  +F  M+ R 
Sbjct: 328 LLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRD 387

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIF--G 178
            ITW ++I GY   G  +  L +  DM  +EE  N  T   +L A S   L+++  +   
Sbjct: 388 IITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLN 447

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
             +  F I+ G E+     T ++++   +G   EAEN  +    K
Sbjct: 448 HLMRNFKIEPGLEHY----TCMVALLSRAGLLDEAENFMKTTQVK 488


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 184/551 (33%), Positives = 304/551 (55%), Gaps = 8/551 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC-FREAENVFRGLAYK 223
           +L+ C+ +     G QIHA  IKSG E + FVG SL+++YF  G  F E   VF GL  K
Sbjct: 124 LLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVK 183

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV     MI  Y + G+   +  +F  +L+   EPN +T + VI  C E   ++ G+  H
Sbjct: 184 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 243

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           G+ +  G      + +A++ M+G++   ++A ++FD + E + I WT++IS   R+    
Sbjct: 244 GVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFD 303

Query: 344 KAINGFLEF-LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
           +A+  F     D G+C D     TV+  C     L+ G ++H   I  G+  +V + ++L
Sbjct: 304 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSL 363

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y K G +  ++ + D    K +  ++A+L G+ +    D + V+ +F +      + 
Sbjct: 364 VDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQN--GDFKSVIQIFRKME----KV 417

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D   F  +L   A  A + +G+ +H   I+ G   DVIV +AL+ +YAKCG I+ A  IF
Sbjct: 418 DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIF 477

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             +  R++++WN+M+  +A +G G+ AL +F +M +EG  PD IS +G+L AC + GL +
Sbjct: 478 DQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVD 537

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            G   F  + + YG++  +EH++CMVDLLGRAG L EA  LI +S F +   LW  L+  
Sbjct: 538 EGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGA 597

Query: 643 SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
                N + +   +KR+++LEP    S++L++N+Y   G  ++A ++R  M D  ++K  
Sbjct: 598 CTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMP 657

Query: 703 GCSWIEIDSKL 713
           G SWIE  + L
Sbjct: 658 GKSWIETKNNL 668



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 237/471 (50%), Gaps = 18/471 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNR-LDVAQKLFDGMLVRSAITWTSLIKGYL 135
           G  +HA ++KSG + D F  N+L+ LY K        +K+FDG+ V+  I+WTS+I GY+
Sbjct: 137 GLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYV 196

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
             G   + L +   M     + N  T S +++ACS L D   G   H   +  GF++N  
Sbjct: 197 RVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYV 256

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           + ++LI M+  +    +A  +F  L   D  C   +I    +    + A   F  +    
Sbjct: 257 IASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDH 316

Query: 256 -FEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              P+ +TF  V++ C  NLG +++GK++H   +  G    + V +++V MYGK G   E
Sbjct: 317 GMCPDGFTFGTVLTAC-GNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGE 375

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEFLDLGICCDSSCLATVIDGC 371
           ++R+FD +  +N +SW+AL+ GY ++G     I  F  +E +DL       C  T++  C
Sbjct: 376 SQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL------YCFGTILRTC 429

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  + +  G ++H   I+ G   DV + +ALVD+YAK G ++ A+ + D    +    +N
Sbjct: 430 AGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWN 489

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           +++ GF +      E+ + +F+Q    G++PD ++F  +L   + +  +  GR  +  S+
Sbjct: 490 SMIGGFAQN--GRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGRE-YFISM 546

Query: 492 KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSA 539
              Y   V + +   ++ +  + G ++ A  + +    RD  S W A+L A
Sbjct: 547 TKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGA 597


>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
          Length = 671

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 191/640 (29%), Positives = 337/640 (52%), Gaps = 10/640 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           +AVH   +K G    T+  NNL+  Y     L  A+ +FD M  R+ ++W+ LI      
Sbjct: 22  RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81

Query: 138 GDYESVLGIACDMYRSEEK--FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           G     L +   M R  E+   N  T + ++  C+  +D + GEQ+HA A+K G + +  
Sbjct: 82  GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---LEYNKAGESEMAFHVFVHLL 252
           V  +L+ MY   G    +   F     + V     MI   + +  +G  + A  +F  +L
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                P + TF+ ++ V      +  GKQ+HG  VK G   + ++G A++ MYG+ G  +
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           E  R+   I   +  S T+L++ Y R+G   +A+  F + L   +  D S + +++  CS
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCS 320

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               L +  ++H +A+K+ +  D  L  A+V +Y K GD+ S+ ++ +    K T  + A
Sbjct: 321 SLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTA 380

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +L+ +++   D  ++ +  F +    G+E      + +L   ++ + L  G  +H+  +K
Sbjct: 381 LLTCYVQN--DLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVK 438

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G   D  V NAL+TMYAKCG +  A +IF  + +R I+SWNA++++++ HG    A+ L
Sbjct: 439 LGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQL 498

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+ M+ E   PDD + +G+L +C   GL   G   F +++  Y L P +EH+ CMVDL  
Sbjct: 499 FDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFA 558

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAGR S+AM  I++ P     L+W  L++  ++  N     +A+K++L+++P+D   +I+
Sbjct: 559 RAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYII 618

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
           +S+++A   M DE A+ RT ++  +L K+ G S  ++DS+
Sbjct: 619 LSSIHASIDMWDEKARNRTLLDFQQLRKDVGSS--QLDSQ 656



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 239/500 (47%), Gaps = 13/500 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D   G+ VHA  +K G   D   A  L+++YAK  R+  + + F     RS ++WTS+I 
Sbjct: 120 DAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIA 179

Query: 133 GYLDDGD---YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
             ++ GD    ++ + +   M   +      T S IL+   + E    G+Q+H   +K G
Sbjct: 180 CLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMG 239

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E +  +GT+L++MY   G   E   +   + + D      ++  Y + G +  A  VF 
Sbjct: 240 TEVDPALGTALLAMYGRCGGMDEITRLACRIRH-DAFSRTSLLTAYARNGCNMEAVRVFR 298

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +L      +    T+++ VC     +   K++H  A+K     +  + NAIVT+YGK G
Sbjct: 299 DMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCG 358

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               +E +F+ +  ++ ISWTAL++ YV++    +A+  F E +  G+     C+ +V+ 
Sbjct: 359 DIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLR 418

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS  S+L  G Q+H   +K G   D  +  ALV +YAK G ++ A  + +    +    
Sbjct: 419 ACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIIS 478

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA+++ F +    +E   + LF   +   + PD  TF  LLS S S+  LV     +  
Sbjct: 479 WNALITSFSQH--GNEVAAIQLFDMMQEEMVCPDDYTFVGLLS-SCSRMGLVAEGCEYFK 535

Query: 490 SIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG-- 544
            +KT Y  +  + +   ++ ++A+ G    A +    +    D + W A+L++  +HG  
Sbjct: 536 QMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNL 595

Query: 545 -LGKGALLLFEEMKREGFAP 563
            LG+ A     E+K E  +P
Sbjct: 596 DLGRMAAKKILEIKPEDPSP 615



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 132/273 (48%), Gaps = 2/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+++    G L++ + +H + LK+  + DT   N ++ +Y K   +  ++ +F+ +  + 
Sbjct: 315 LLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKD 374

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+WT+L+  Y+ +   +  L    +M R   + +    + +L ACS       G QIH+
Sbjct: 375 TISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHS 434

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G +++  V  +L++MY   G  + A  +F  +  + +   N +I  +++ G    
Sbjct: 435 RVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVA 494

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIV 302
           A  +F  +      P+DYTF  ++S C     V EG +    +  K+ +  ++     +V
Sbjct: 495 AIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMV 554

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
            ++ + G   +A +  DA+  + + + W AL++
Sbjct: 555 DLFARAGRFSDAMKFIDAMPCQPDQLVWEALLA 587


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 173/492 (35%), Positives = 267/492 (54%), Gaps = 3/492 (0%)

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           H  S+   P    + +++  C     ++ GKQLH      G   +  +   +V +Y    
Sbjct: 65  HAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCD 124

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A  +FD I + N+  W  LI GY  +G    A+  + +  D G+  D+     V+ 
Sbjct: 125 SLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLK 184

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+  S +E G ++H   ++ G+  DV +G AL+D+YAK G + SAR + D    +    
Sbjct: 185 ACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVL 244

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N++L+ + +    D    + L S+  L G+ P   T    +S SA  A L +GR LH  
Sbjct: 245 WNSMLAAYSQNGHPDA--CLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGL 302

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           S +  + +   V  AL+ MYAKCGS+  A  +F+ +  + +VSWNAM++ YA+HG    A
Sbjct: 303 SWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEA 362

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LFEEM R    PD I+ +GVL AC + GL E G   F  + + Y + P ++H+ CMVD
Sbjct: 363 LDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVD 421

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLG +GRL EA NLI          +W  L++  K+ AN +   +A +RL++LEP DAG+
Sbjct: 422 LLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGN 481

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++++SN+YA  G  +  AK+R  M D RL K   CSWIE+ +K+H F++    HP S+EI
Sbjct: 482 YVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEI 541

Query: 730 YSKLDLLNDEMK 741
           YS+L+ +   MK
Sbjct: 542 YSELERVGGLMK 553



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 150/587 (25%), Positives = 252/587 (42%), Gaps = 64/587 (10%)

Query: 7   ANLLQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSC--SERTLL---FNDW 61
           ++LL+P F +  SL          + +P   +   +L +I S S   +E T L   ++++
Sbjct: 19  SSLLKPTFFASLSLQYQSPNPSFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNY 78

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
             L++  I    +K G+ +HA +  +G   DT  A  L+NLY   + L  A+ LFD +  
Sbjct: 79  ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
            +   W  LI+GY  +G YE+ + +   M+      +  T   +L+AC+ L     G +I
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   +++G+E +VFVG +LI MY   GC   A  VF  +  +D    N M+  Y++ G  
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           +    +   ++ +   P + T    IS   +N  + +G++LHGL+ +        V  A+
Sbjct: 259 DACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTAL 318

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V MY K G    A  +F+ +  + ++SW A+I+GY   GH  +A++ F E   +    D 
Sbjct: 319 VDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAK-PDH 377

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLD 420
                V+  CS    LE G       I+   +   V+  T +VD+    G L  A     
Sbjct: 378 ITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEA----- 432

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                    +N I+   M+ + D      +L S +  A +E   +   RL+ L    A  
Sbjct: 433 ---------YNLIMQ--MKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDA-- 479

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALI--TMYAKCGSIDGAFQIFKGISDRDI-----VSW 533
                                GN +I   +YA+ G  +G  ++ K ++DR +      SW
Sbjct: 480 ---------------------GNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSW 518

Query: 534 -------NAMLSAYALHGLGKGALLLFEE----MKREGFAPDDISIL 569
                  +A LS    H L        E     MK  G++P   S+ 
Sbjct: 519 IEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVF 565


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 170/501 (33%), Positives = 283/501 (56%), Gaps = 3/501 (0%)

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           S+   HV   +     EP+   +  ++  C +   ++EGK +H   +      ++ + N+
Sbjct: 55  SKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNS 114

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY + G  E A R+FD +  R+++SWT++I+GY ++     A+  F   L  G   +
Sbjct: 115 LLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPN 174

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              L++++  C   ++   G Q+H    K+G  S+V +G++LVD+YA+ G L  A ++ D
Sbjct: 175 EFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFD 234

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
              CK    +NA+++G+  K   + E+ + LF + +  G  P   T+S LLS  +S  CL
Sbjct: 235 KLGCKNEVSWNALIAGYARK--GEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCL 292

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            +G+ LHA+ +K+       VGN L+ MYAK GSI  A ++F  +   D+VS N+ML  Y
Sbjct: 293 EQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGY 352

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           A HGLGK A   F+EM R G  P+DI+ L VL AC ++ L + G   F  + + Y + P 
Sbjct: 353 AQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPK 411

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           + H+A +VDLLGRAG L +A + I   P   +  +W  L+  SK+  N++    A++R+ 
Sbjct: 412 VSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVF 471

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           +L+P   G+  L++N+YA  G  ++ AKVR  M D  + KE  CSW+E+++ +H FVA+ 
Sbjct: 472 ELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVAND 531

Query: 721 KDHPESEEIYSKLDLLNDEMK 741
             HP+ E+I+   + LN ++K
Sbjct: 532 VAHPQKEKIHKMWEKLNQKIK 552



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 207/425 (48%), Gaps = 8/425 (1%)

Query: 53  ERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVA 112
           +RTL    +  L+K     G LK G+ VH  +L S  ++D    N+L+ +YA+   L+ A
Sbjct: 73  DRTL----YNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL 172
           ++LFD M  R  ++WTS+I GY  +      L +   M     + NE T S +++ C  +
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
                G QIHA   K G  +NVFVG+SL+ MY   G   EA  VF  L  K+    N +I
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALI 248

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             Y + GE E A  +FV +    + P ++T++ ++S C     +E+GK LH   +K    
Sbjct: 249 AGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQK 308

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
               VGN ++ MY K G   +AE++FD + + +++S  +++ GY + G G +A   F E 
Sbjct: 309 LVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEM 368

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
           +  GI  +     +V+  CS    L+ G    G   K+     V     +VD+  + G L
Sbjct: 369 IRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLL 428

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD-PVTFSRLL 471
             A+  ++    + T      L G  +   + E   M  ++ QR+  ++P  P T + L 
Sbjct: 429 DQAKSFIEEMPIEPTVAIWGALLGASKMHKNTE---MGAYAAQRVFELDPSYPGTHTLLA 485

Query: 472 SLSAS 476
           ++ AS
Sbjct: 486 NIYAS 490



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 181/388 (46%), Gaps = 15/388 (3%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           + +L+ C+ L     G+ +H   + S F++++ +  SL+ MY   G    A  +F  + +
Sbjct: 78  NTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPH 137

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +D+     MI  Y +   +  A  +F  +LS   EPN++T ++++  C        G+Q+
Sbjct: 138 RDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQI 197

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H    K+G    + VG+++V MY + G   EA  +FD +  +N +SW ALI+GY R G G
Sbjct: 198 HACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEG 257

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +A+  F+     G        + ++  CS    LE G  LH   +K        +G  L
Sbjct: 258 EEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTL 317

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME----KIADDEEDVMVLFSQQRLA 458
           + +YAK G ++ A  + D          N++L G+ +    K A  + D M+ F      
Sbjct: 318 LHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRF------ 371

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSID 516
           G+EP+ +TF  +L+  +    L  G+  H + +   Y  +  V +   ++ +  + G +D
Sbjct: 372 GIEPNDITFLSVLTACSHARLLDEGK--HYFGLMRKYNIEPKVSHYATIVDLLGRAGLLD 429

Query: 517 GAFQIFKGISDRDIVS-WNAMLSAYALH 543
            A    + +     V+ W A+L A  +H
Sbjct: 430 QAKSFIEEMPIEPTVAIWGALLGASKMH 457


>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
          Length = 836

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 208/766 (27%), Positives = 371/766 (48%), Gaps = 60/766 (7%)

Query: 43  LCSISSVSCSERTLLFNDWPQLVKISIGSGD----------------------LKLGQAV 80
           +C    ++ S R  L+ND   L +  + SG                       L+ G+++
Sbjct: 26  VCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSI 85

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFN---RLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           H +++K+G + DT   N L+++YAK      +D A   F  +  +  ++W S+I GY ++
Sbjct: 86  HGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSEN 145

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE-DRIFGEQIHAFAIKSGFENNVFV 196
           G +E  L +   M   E   N  T + +L  CSL+E  R +G++IH F ++ G E ++ V
Sbjct: 146 GLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISV 205

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L++ Y      R  E++FR     D+   N +I  Y        A  +F  LL +  
Sbjct: 206 SNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGM 265

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG-VVREISVGNAIVTMYGKHGMSEEAE 315
            P+  +  ++++ C +   +  G ++HG   +   +++E S+ NA+V+ Y +    + A 
Sbjct: 266 APDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAF 325

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFL-EFLDLGICCDSSCLATVIDGCSVC 374
           R F  I  ++ +SW A++S    S H  +     L E        DS  +  +I   + C
Sbjct: 326 RSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMSTFC 385

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
             +++  + HG++++ GY  D  +  A++D YAK G L  A  L    + +     N ++
Sbjct: 386 -GIKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMI 444

Query: 435 SGFMEK--IADDE---------------------------EDVMVLFSQQRLAGMEPDPV 465
           S +++   + D E                           +    LF Q +  G+ PD +
Sbjct: 445 SCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTI 504

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           + + +LS     + +   +  H Y ++     D+ +  AL+  Y+KCG+I  A+ +F+  
Sbjct: 505 SITNILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGALLDAYSKCGNIANAYNLFQVS 563

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
             +D+V + AM+ AYA+HG+ + A+ LF +M      PD + +  +L AC ++GL + GI
Sbjct: 564 LHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGI 623

Query: 586 CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL-INSSPFSESPLLWRTLVSVSK 644
            +F  I +IYG+ P  EH ACMVDLL R+GRL +A +  ++  P   +   W +L+   K
Sbjct: 624 KIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGSLLGACK 683

Query: 645 LMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
           +    K   LA+ RL  +E +D G+++++SN++A     +    VR  M    + K AGC
Sbjct: 684 VHGEVKIGQLAADRLFSMEAEDIGNYVIMSNIFAADDKWESVEHVRKLMKSKDMKKPAGC 743

Query: 705 SWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAF 750
           SWIE++   H FVAS   H +   IY  L  L  +++ +  ++SA+
Sbjct: 744 SWIEVEKTRHLFVASDVQHQDRFSIYDVLGSLYQQIRGQQMETSAY 789



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 174/649 (26%), Positives = 288/649 (44%), Gaps = 69/649 (10%)

Query: 100 INLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS---EEK 156
           +++Y +   L  A  +FD M    A+    LI      G Y  V  +   M  S   E  
Sbjct: 1   MDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 60

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG---CFREA 213
               T +V+L  C+ L     G  IH + IK+G E +   G +L+SMY   G      +A
Sbjct: 61  PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDA 120

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC-YE 272
              F  +  KDV   N +I  Y++ G  E A  +F  ++S +  PN  T  NV+  C   
Sbjct: 121 HLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLV 180

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
             G   GK++HG  V+ G+  +ISV NA++  Y K       E +F +    ++++W  +
Sbjct: 181 EYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTV 240

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG- 391
           I+GYV + +  +A+  F   L  G+  DS  L +++  C+   NL +G+++HG+  +H  
Sbjct: 241 IAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPE 300

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
            L +  L  ALV  Y++     +A         K +  +NAILS      A+ E  +   
Sbjct: 301 LLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSA----CANSEHHIEQF 356

Query: 452 FSQQRLAG------MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
           F   RL G       + D VT   ++ +S      +   S H YS++ GY  D  V NA+
Sbjct: 357 F---RLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQES-HGYSLRVGYTGDSSVANAI 412

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIV-------------------------------SWN 534
           +  YAKCG +  A  +F+ ++ R+IV                               +WN
Sbjct: 413 LDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWN 472

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
            M   YA + L   A  LF +++ EG  PD ISI  +L ACI+  LS   +     ++Q 
Sbjct: 473 LMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIH--LSSVQL-----VKQC 525

Query: 595 YG--LRPILEHF---ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL--MA 647
           +G  LR  LE       ++D   + G ++ A NL   S   +  +++  ++    +  MA
Sbjct: 526 HGYMLRASLEDIHLEGALLDAYSKCGNIANAYNLFQVS-LHKDLVIFTAMIGAYAMHGMA 584

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
                + +    LD++P       L+S   +  G++D   K+  ++ ++
Sbjct: 585 EKAVELFSKMLTLDIKPDHVVLTALLSAC-SHAGLVDAGIKIFKSIREI 632


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 200/641 (31%), Positives = 324/641 (50%), Gaps = 73/641 (11%)

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMA 244
           +S  +      TSL++ +  +G  R+A   F  +  A +D    N M+  + +A  +  A
Sbjct: 87  RSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPA 146

Query: 245 FHVFVHLLSS-DFEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             VF  LL S    P+DY+FT +IS      NL      QLH   +K G    +SV NA+
Sbjct: 147 VSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNAL 206

Query: 302 VTMYGKHGMSE---EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE------- 351
           + +Y K    E   +A ++ D + +++ ++WT ++ GYVR G    A + F E       
Sbjct: 207 IALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDV 266

Query: 352 --------FLDLGICCDSSCL----------------ATVIDGCSVCSNLELGLQLHGFA 387
                   ++  G+C D+  L                 +V+  C+       G  +HG  
Sbjct: 267 VWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQI 326

Query: 388 IK--HGYLSDVRL--GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           I+    ++ +  L    ALV +Y+KGG +  A+ + D  + K    +N ILSG+++    
Sbjct: 327 IRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCL 386

Query: 444 DE-----------------------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           D+                             ED + LF+Q R   ++P   T++  ++  
Sbjct: 387 DKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 446

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
                L  GR LHA+ ++ G+ A    GNAL+TMYAKCG+++ A  +F  + + D VSWN
Sbjct: 447 GELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWN 506

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM+SA   HG G+ AL LF++M  EG  PD IS L +L AC ++GL + G   F  +++ 
Sbjct: 507 AMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRD 566

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           +G+ P  +H+A ++DLLGR+GR+ EA +LI + PF  +P +W  ++S  +   + +F   
Sbjct: 567 FGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAY 626

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
           A+ +L  + P+  G++IL+SN Y+  G   +AA+VR  M D  + KE GCSWIE+ SK+H
Sbjct: 627 AADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIH 686

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEM-KLKVKDSSAFELQD 754
            F+     HPE++E+Y  L+++   M KL     + F L D
Sbjct: 687 VFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHD 727



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 185/432 (42%), Gaps = 79/432 (18%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDV---AQKLFDGMLVRSAITWTSLIKGYLD 136
           +H  +LKSG+      +N LI LY K +  +    A+K+ D M  +  +TWT+++ GY+ 
Sbjct: 187 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 246

Query: 137 DGD-------YESVLGI--------------------ACDMYR---SEE-KFNEHTCSVI 165
            GD       +E V G                     A +++R   SE+   +E T + +
Sbjct: 247 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 306

Query: 166 LEACSLLEDRIFGEQIHA--------FAIKSGFE-NNVFVG------------------- 197
           L AC+     + G+ +H         F  ++    NN  V                    
Sbjct: 307 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 366

Query: 198 -------TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
                   +++S Y  SGC  +A  VF+ + YK+      M+  Y   G SE A  +F  
Sbjct: 367 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 426

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + + D +P DYT+   I+ C E   ++ G+QLH   V+ G     S GNA++TMY K G 
Sbjct: 427 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 486

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             +A  +F  +   + +SW A+IS   + GHG +A+  F + +  GI  D     T++  
Sbjct: 487 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 546

Query: 371 CSVCSNLELGLQL-----HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           C+    ++ G          F I  G     R    L+D+  + G +  AR L+     +
Sbjct: 547 CNHAGLVDEGFHYFESMKRDFGISPGEDHYAR----LIDLLGRSGRIGEARDLIKTMPFE 602

Query: 426 YTAE-FNAILSG 436
            T   + AILSG
Sbjct: 603 PTPSIWEAILSG 614



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 128/302 (42%), Gaps = 39/302 (12%)

Query: 77  GQAVHAFLLKSGSQNDTFEA-----NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G++VH  +++    N   EA     N L+ LY+K  ++ +A+++FD M ++  ++W +++
Sbjct: 319 GKSVHGQIIRL-QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTIL 377

Query: 132 KGYLDDG------------DY-------------------ESVLGIACDMYRSEEKFNEH 160
            GY+D G             Y                   E  L +   M   + K  ++
Sbjct: 378 SGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDY 437

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T +  + AC  L     G Q+HA  ++ GFE +   G +L++MY   G   +A  VF  +
Sbjct: 438 TYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVM 497

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG- 279
              D    N MI    + G    A  +F  +++   +P+  +F  +++ C     V+EG 
Sbjct: 498 PNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGF 557

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVR 338
                +   FG+         ++ + G+ G   EA  +   +  E     W A++SG   
Sbjct: 558 HYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRT 617

Query: 339 SG 340
           +G
Sbjct: 618 NG 619


>gi|449526313|ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 706

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 202/674 (29%), Positives = 344/674 (51%), Gaps = 23/674 (3%)

Query: 78  QAVHA-FLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           Q +HA F+L    QN T  ++ LI+ YA    L+ + ++F  ++  +   + ++++    
Sbjct: 44  QQIHARFILHGFHQNPTL-SSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTR 102

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G+ E  L +   M       +E T   +L +CS   +  FG  IH + +K GF+    V
Sbjct: 103 YGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVV 162

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
            T+L  MY     F  A  +F   + KD+   + +  E  +    E  F VF  +++   
Sbjct: 163 ATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQL 222

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ +TF N++        ++  K +H +A+   +  ++ V  A++++Y K     +A +
Sbjct: 223 VPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARK 282

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD + E++ + W  +I+ Y R G   + +  F      GI  D      VI   +    
Sbjct: 283 LFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKC 342

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           ++ G Q H   +++G  S V +  +L+D+Y +   L SA        CK       I + 
Sbjct: 343 VDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSA--------CK-------IFNW 387

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
             +K        + LFS+ +  G++ D V    +L        L   + LH YS+K G  
Sbjct: 388 MTDK---SSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLT 444

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFK--GISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           +   +  AL+  YAKCGSI+ A ++F+   I D+D++ WN+M+SA+A HG       L+ 
Sbjct: 445 SLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYN 504

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
            MK     PD ++ LG+L AC+ SGL E G   F E+ + YG +P  EH+ACMV+LLGRA
Sbjct: 505 RMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRA 564

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G +SEA  L+ + P      +W  L+S  K+   SK +  A+++L+++EP++AG++IL+S
Sbjct: 565 GLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLS 624

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           N+YA  G  D  AK+R+ + +  L K  GCSW+EI+  +  F  + + HP + +IY+ L 
Sbjct: 625 NIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILG 684

Query: 735 LLNDEMKLKVKDSS 748
            L  E+K +V++ S
Sbjct: 685 NLELEIK-EVREKS 697



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 154/322 (47%), Gaps = 5/322 (1%)

Query: 255 DFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +F        N +S+ +     ++  +Q+H   +  G  +  ++ + ++  Y   G+   
Sbjct: 18  NFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNH 77

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           + ++F ++ + NL  + A++    R G   + +  + + +   +  D      V+  CS 
Sbjct: 78  SLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSS 137

Query: 374 CSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
            SN+  G  +HG+ +K G+ L DV + TAL ++Y +  + ++A  L D  S K     ++
Sbjct: 138 FSNVGFGRTIHGYLVKLGFDLFDV-VATALAEMYEECIEFENAHQLFDKRSVKDLGWPSS 196

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           + +   +   D+ E +  +F +     + PD  TF  LL   A    +   + +H  +I 
Sbjct: 197 LTTEGPQN--DNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIV 254

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +  + D++V  A++++Y+K  S+  A ++F  + ++D V WN M++AYA  G     L L
Sbjct: 255 SKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLEL 314

Query: 553 FEEMKREGFAPDDISILGVLQA 574
           F+ M R G   D  + L V+ +
Sbjct: 315 FKSMARSGIRSDLFTALPVISS 336



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 117/540 (21%), Positives = 226/540 (41%), Gaps = 35/540 (6%)

Query: 34  PNPKSQVAYLCSISSVSCSERTLLF-------------NDWPQLVKISIGSGDLKLGQAV 80
           PN     A L +++    SERTLL                +P +++      ++  G+ +
Sbjct: 88  PNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTI 147

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H +L+K G       A  L  +Y +    + A +LFD   V+     +SL      + + 
Sbjct: 148 HGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNG 207

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
           E +  +   M   +   +  T   +L   + L      + +H  AI S    ++ V T++
Sbjct: 208 EGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAV 267

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           +S+Y       +A  +F  +  KD    N MI  Y + G+      +F  +  S    + 
Sbjct: 268 LSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDL 327

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           +T   VIS   +   V+ GKQ H   ++ G   ++SV N+++ MY +  + + A ++F+ 
Sbjct: 328 FTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNW 387

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           +++++ ++                A++ F +    GI  D   +  ++        LE  
Sbjct: 388 MTDKSSLT----------------ALSLFSKMKSDGIQADFVIMINILPAFVHIGALENV 431

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL--DGFSCKYTAEFNAILSGFM 438
             LHG+++K G  S   L TAL+  YAK G ++ A+ L   +    K    +N+++S   
Sbjct: 432 KYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHA 491

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAA 497
                D      L+++ + +  +PD VTF  LL+   +   + +G+       ++ G   
Sbjct: 492 NH--GDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQP 549

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFEEM 556
                  ++ +  + G I  A ++ K +  + D   W  +LSA  +H   K A    E++
Sbjct: 550 SQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKL 609


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 197/656 (30%), Positives = 336/656 (51%), Gaps = 37/656 (5%)

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLL---EDRI 176
           +R A+++ SLI        +E  L    DM        +  T   +L ACS L   + R 
Sbjct: 130 LRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRR 189

Query: 177 FGEQIHAFAIKSGFENN---VFVGTSLISMYFHSGCFREAENVFRGLAYK------DVRC 227
            G + HAFA+K GF +     F   +L+SMY   G   +A+++FR  A        DV  
Sbjct: 190 LGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVT 249

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
            N MI    + G    A  V   ++S    P+  TF + +  C     +  G+++H + +
Sbjct: 250 WNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVL 309

Query: 288 KFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAISE--RNLISWTALISGYVRSGHGGK 344
           K   +   S V +A+V MY  +     A R+FD + E  R L  W A+I GY ++G   +
Sbjct: 310 KDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEE 369

Query: 345 AINGFLEFLDLGICCDS-SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
           A+  F        C  S + ++ V+  C+          +HG+ +K G   +  +  AL+
Sbjct: 370 ALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALM 429

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME-- 461
           D+YA+ G++  AR +      +    +N +++G +  +     +   L ++ +L      
Sbjct: 430 DMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCV--VQGHAAEAFQLVTEMQLPSPSPS 487

Query: 462 --------------PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
                         P+ +T   LL   A+ A   RG+ +H Y+++    +D+ VG+AL+ 
Sbjct: 488 SSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVD 547

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA-PDDI 566
           MYAKCG +  +  +F  +  R++++WN ++ AY +HGLG  A+ LF+EM   G A P+++
Sbjct: 548 MYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEV 607

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + +  L AC +SGL + G+ LF+ +E+ +G++P  +  AC+VD+LGRAGRL EA ++I S
Sbjct: 608 TFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITS 667

Query: 627 -SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDE 685
             P  +    W +L+   +L  N +   +A++RL +LEP +A  ++L+ N+Y+  GM D+
Sbjct: 668 MEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDK 727

Query: 686 AAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +  VR  M    ++KE GCSWIE+D  +H F+A    HP S E+++ +D L + M+
Sbjct: 728 SVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMR 783


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 172/571 (30%), Positives = 309/571 (54%), Gaps = 10/571 (1%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H    K+G   ++FV TSL++ Y      R+A  +F G+  ++V     ++  Y    +
Sbjct: 100 VHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQ 159

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
             +   VFV +L     P+ YT    ++ C  +  V+ GKQ+HG A+K+G     S+GN+
Sbjct: 160 PALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNS 219

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK-AINGFLEFLDLGICC 359
           + ++Y K G  + A R F  I E+N+I+WT +IS         +  ++ F++ L  G+  
Sbjct: 220 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMP 279

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   L +V+  C    +L LG Q+  F+ K G  +++ +  + + +Y + G+   A  L 
Sbjct: 280 NEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLF 339

Query: 420 DGFSCKYTAEFNAILSGF---MEKIADDEE------DVMVLFSQQRLAGMEPDPVTFSRL 470
           +         +NA++SG+   M+   DD +        + +F   + + M+PD  TFS +
Sbjct: 340 EQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSI 399

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           LS+ ++   L +G  +HA +IK+G+ +DV+V +AL+ MY KCG I  A + F  +  R  
Sbjct: 400 LSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTF 459

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           V+W +M+S Y+ HG  + A+ LFEEM+  G  P++I+ + +L AC Y+GL E     F+ 
Sbjct: 460 VTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDM 519

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           +++ Y + P+++H+ CM+D+  R GR+ +A + I  + F  +  +W +LV+  +   N +
Sbjct: 520 MKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME 579

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            +  A+ +LL+L+PK   ++IL+ NMY       + A+VR  M    +      SWI I 
Sbjct: 580 LAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIK 639

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            K++ F A+ + HP++ E+Y  L+ L ++ K
Sbjct: 640 DKVYFFRANDRTHPQATELYQLLENLLEKAK 670



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 249/497 (50%), Gaps = 20/497 (4%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+   + +G L   +AVH  + K+G+  D F A +L+N Y + +    A++LFDGM  R+
Sbjct: 84  LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERN 143

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +TWT+L+ GY  +      L +  +M       + +T    L AC    D   G+Q+H 
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES-E 242
           +AIK G E+   +G SL S+Y   G    A   F  +  K+V     MI    +  E  E
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           +   +F+ +L     PN++T T+V+S+C   L +  GKQ+   + K G    + V N+ +
Sbjct: 264 LGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVR-----------SGHGGKAINGFLE 351
            +Y + G ++EA R+F+ + + ++I+W A+ISGY +              G +A+  F +
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
                +  D    ++++  CS    LE G Q+H   IK G+LSDV + +ALV++Y K G 
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           ++ A         +    + +++SG+ +      ++ + LF + RLAG+ P+ +TF  LL
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQH--GQPQEAIQLFEEMRLAGVRPNEITFVSLL 501

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFK--GISD 527
           S + S A LV     +   +K  Y  + +V +   +I M+ + G ++ AF   K  G   
Sbjct: 502 S-ACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560

Query: 528 RDIVSWNAMLSAYALHG 544
            + + W+++++    HG
Sbjct: 561 NEAI-WSSLVAGCRSHG 576



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 165/327 (50%), Gaps = 18/327 (5%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  ++  C E   +   + +HG   K G   ++ V  ++V  Y +   + +A R+FD + 
Sbjct: 81  YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP 140

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ERN+++WTAL++GY  +      +  F+E L++G       L   ++ C    +++LG Q
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +HG+AIK+G  S   +G +L  +YAK G L SA         K    +  ++S      A
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISA----CA 256

Query: 443 DDEEDV---MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
           +DEE V   M LF    + G+ P+  T + ++SL  ++  L  G+ + A+S K G   ++
Sbjct: 257 EDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA---------LHGLGKG-- 548
            V N+ + +Y + G  D A ++F+ + D  I++WNAM+S YA         L    +G  
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ 376

Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC 575
           AL +F ++KR    PD  +   +L  C
Sbjct: 377 ALTIFRDLKRSVMKPDLFTFSSILSVC 403



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 3/227 (1%)

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
           +  L  G    S+    ++  C    +L     +HG   K G  +D+ + T+LV+ Y + 
Sbjct: 67  MTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRC 126

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
              + AR L DG   +    + A+++G+   +       + +F +    G  P   T   
Sbjct: 127 SAARDARRLFDGMPERNVVTWTALVTGY--TLNSQPALGLEVFVEMLEMGRYPSHYTLGA 184

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
            L+   +   +  G+ +H Y+IK G  +   +GN+L ++YAK GS+D A + F  I +++
Sbjct: 185 TLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN 244

Query: 530 IVSWNAMLSAYAL-HGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +++W  M+SA A      +  + LF +M  +G  P++ ++  V+  C
Sbjct: 245 VITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLC 291



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 18/204 (8%)

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
           D ++ M + ++    G       +  LL        L   R++H +  KTG +AD+ V  
Sbjct: 62  DVQEAMTMLTE----GKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVAT 117

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           +L+  Y +C +   A ++F G+ +R++V+W A+++ Y L+      L +F EM   G  P
Sbjct: 118 SLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQI------YGLRPILEHFACMVDLLGRAGRL 617
              ++   L AC+ S       C  +  +Q+      YG   I      +  L  + G L
Sbjct: 178 SHYTLGATLNACLAS-------CDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSL 230

Query: 618 SEAMNLINSSPFSESPLLWRTLVS 641
             A+      P  ++ + W T++S
Sbjct: 231 DSALRAFWRIP-EKNVITWTTMIS 253


>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
 gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 192/625 (30%), Positives = 321/625 (51%), Gaps = 4/625 (0%)

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W S I+G ++ G+    L +   +  +  + N  T   + +AC+ L      + IH   +
Sbjct: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           KS F ++++V T+++ MY   G   +A N+F  +  +++   N MI+ +++ G  +  F+
Sbjct: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +F+ +      P+  T   +         +   K +H + ++ G+  + SV N  +  Y 
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199

Query: 307 KHGMSEEAERMFDAISE--RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           K G  + A+ +F  I +  R+ +SW +LI+ Y   G    A+  +   L  G   D+S +
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
            +++  C     L  G  +HG   + G  SD+ L   L+ +Y++ GD+ SA +L DG S 
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSI 319

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           +    + A++SG+ E      +D +VLF+     G +PD VT   L+S       L  G 
Sbjct: 320 RTCVSWTAMISGYSE--VGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGH 377

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +  Y+       DV+V NALI MYAKCGS++ A +IF  + +R +VSW AM++A AL+G
Sbjct: 378 WIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNG 437

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
             + AL LF  +   G  P++I+ L VLQAC + G  E G   F  + + YG+ P L+H+
Sbjct: 438 EFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHY 497

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
           +CM+DLLGR G+L EA+ +I   P      +W  L+   K+  N +     S+ L +L+P
Sbjct: 498 SCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQP 557

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
           + A SF+ ++N+YA  G  DE A +R TM   ++ K  G S ++++   H F    + H 
Sbjct: 558 RVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHH 617

Query: 725 ESEEIYSKLDLLNDEMKLKVKDSSA 749
           +S  IY  L  L  +MK K   S A
Sbjct: 618 DSLLIYEALGNLAMQMKQKEFSSHA 642



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 220/486 (45%), Gaps = 6/486 (1%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P L K       L   Q +H  ++KS   +D +    ++++Y K  ++D A  LFD M V
Sbjct: 56  PFLSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPV 115

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R+  +W ++I G+   G  + V  +   M     + +  T   +  A    +   F + +
Sbjct: 116 RNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAV 175

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV--NFMILEYNKAG 239
           HA  I++G + +  V  + I+ Y   G  + A+ VF G+       V  N +I  Y   G
Sbjct: 176 HAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFG 235

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           +   A   +  LL   F+P+  T  +++S C +   +  G  +HG   + G   +IS+ N
Sbjct: 236 KYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLIN 295

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            +++MY + G    A  +FD +S R  +SWTA+ISGY   G    A+  F    + G   
Sbjct: 296 TLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKP 355

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   + ++I GC     L LG  +  +A  H    DV +  AL+D+YAK G L  AR + 
Sbjct: 356 DIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIF 415

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                +    + A+++     +  +  + + LFS    +G+EP+ +TF  +L        
Sbjct: 416 YSLPNRTVVSWTAMIAAC--ALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGY 473

Query: 480 LVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAML 537
           L +GR      + + G    +   + +I +  + G +  A ++ + +  + D   W A+L
Sbjct: 474 LEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALL 533

Query: 538 SAYALH 543
            A  +H
Sbjct: 534 GACKIH 539


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 184/551 (33%), Positives = 304/551 (55%), Gaps = 8/551 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC-FREAENVFRGLAYK 223
           +L+ C+ +     G QIHA  IKSG E + FVG SL+++YF  G  F E   VF GL  K
Sbjct: 65  LLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVK 124

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV     MI  Y + G+   +  +F  +L+   EPN +T + VI  C E   ++ G+  H
Sbjct: 125 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 184

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           G+ +  G      + +A++ M+G++   ++A ++FD + E + I WT++IS   R+    
Sbjct: 185 GVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFD 244

Query: 344 KAINGFLEF-LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
           +A+  F     D G+C D     TV+  C     L+ G ++H   I  G+  +V + ++L
Sbjct: 245 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSL 304

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y K G +  ++ + D    K +  ++A+L G+ +    D + V+ +F +      + 
Sbjct: 305 VDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQN--GDFKSVIQIFRKME----KV 358

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D   F  +L   A  A + +G+ +H   I+ G   DVIV +AL+ +YAKCG I+ A  IF
Sbjct: 359 DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIF 418

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             +  R++++WN+M+  +A +G G+ AL +F +M +EG  PD IS +G+L AC + GL +
Sbjct: 419 DQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVD 478

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            G   F  + + YG++  +EH++CMVDLLGRAG L EA  LI +S F +   LW  L+  
Sbjct: 479 EGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGA 538

Query: 643 SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
                N + +   +KR+++LEP    S++L++N+Y   G  ++A ++R  M D  ++K  
Sbjct: 539 CTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMP 598

Query: 703 GCSWIEIDSKL 713
           G SWIE  + L
Sbjct: 599 GKSWIETKNNL 609



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 149/551 (27%), Positives = 268/551 (48%), Gaps = 34/551 (6%)

Query: 8   NLLQPPFKSQQSLPPLKKKVPIN-TFSPNPKSQVAYLCSISSVSCSERTLLFND------ 60
           +L++P FK   SL       P+N + + NP S++  LC    +S + + L   D      
Sbjct: 3   HLMKPLFKRYYSL-----LTPLNLSDNTNPFSKILQLCKSGELSGALQLLKSIDPGEISA 57

Query: 61  ----WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR-LDVAQKL 115
               +  L++          G  +HA ++KSG + D F  N+L+ LY K        +K+
Sbjct: 58  KPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKV 117

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FDG+ V+  I+WTS+I GY+  G   + L +   M     + N  T S +++ACS L D 
Sbjct: 118 FDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDL 177

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G   H   +  GF++N  + ++LI M+  +    +A  +F  L   D  C   +I   
Sbjct: 178 KLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISAL 237

Query: 236 NKAGESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVR 293
            +    + A   F  +       P+ +TF  V++ C  NLG +++GK++H   +  G   
Sbjct: 238 TRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTAC-GNLGRLKQGKEVHAKVITTGFCG 296

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LE 351
            + V +++V MYGK G   E++R+FD +  +N +SW+AL+ GY ++G     I  F  +E
Sbjct: 297 NVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME 356

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
            +DL       C  T++  C+  + +  G ++H   I+ G   DV + +ALVD+YAK G 
Sbjct: 357 KVDL------YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGC 410

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           ++ A+ + D    +    +N+++ GF +      E+ + +F+Q    G++PD ++F  +L
Sbjct: 411 IEYAQTIFDQMPVRNLITWNSMIGGFAQN--GRGEEALRIFNQMVKEGIKPDYISFIGIL 468

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRD 529
              + +  +  GR  +  S+   Y   V + +   ++ +  + G ++ A  + +    RD
Sbjct: 469 FACSHRGLVDEGRE-YFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRD 527

Query: 530 IVS-WNAMLSA 539
             S W A+L A
Sbjct: 528 DSSLWAALLGA 538


>gi|297810463|ref|XP_002873115.1| EMB175 [Arabidopsis lyrata subsp. lyrata]
 gi|297318952|gb|EFH49374.1| EMB175 [Arabidopsis lyrata subsp. lyrata]
          Length = 896

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 219/734 (29%), Positives = 373/734 (50%), Gaps = 48/734 (6%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+++S    D+++ +AVHA  LK   +  T   N LI+ Y K      A  +F  +   +
Sbjct: 86  LLRLSAQYHDVEVTKAVHASFLKL-REEKTRLGNALISTYLKLGFPREAFLVFVSLSSPT 144

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGEQIH 182
            +++T+LI G+         L +   M ++   + NE+T   IL AC  +     G QIH
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGIVQPNEYTFVAILTACVRVSRFSLGIQIH 204

Query: 183 AFAIKSGFENNVFVGTSLISMYFH---SGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
              +KSGF N+VFVG SL+S+Y     S C  +   +F  + ++DV   N +I    K G
Sbjct: 205 GLIVKSGFLNSVFVGNSLMSLYSKDSGSSC-DDVLKLFDEIPHRDVASWNTVISSLVKEG 263

Query: 240 ESEMAFHVFVHLLSSDFEPND-YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           +S  AF++F  +   +    D +T + ++S C ++  +  G++LHG A++ G+++E+SV 
Sbjct: 264 KSHKAFNLFYEMNRVEGLGVDCFTLSTLLSSCTDSSDLLRGRELHGRAIRIGLMQELSVN 323

Query: 299 NAIVTMYGKHG-------------------------------MSEEAERMFDAISERNLI 327
           NA++  Y K G                               M + A  +F+ I+E+N I
Sbjct: 324 NALIGFYSKFGDMKKVESLYEMMMVQDAVTFTEMITAYMAFGMVDSAVEIFENITEKNTI 383

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           ++ AL++G+ R+GHG KA+  F E L  G+      L + +D C + S   +  Q+HGF 
Sbjct: 384 TYNALMAGFCRNGHGLKALKLFTEMLQRGVELTDFSLTSAVDACGLVSEKRVSEQIHGFC 443

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY--TAEFNAILSGFMEKIADDE 445
           IK G L +  + TAL+D+  +   +  A  + + +      +    +IL G+      D+
Sbjct: 444 IKFGCLLNPCIQTALLDMCTRCERMADAEEMFEQWPSNLDRSKATTSILGGYARNGLPDK 503

Query: 446 EDVMVLFSQQRLAGMEP--DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
              + LF  + L   E   D V+ + +L++  +      G  +H Y++K GY +DV +GN
Sbjct: 504 --ALSLF-HRTLCEEELFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDVCLGN 560

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           +LI+MY+KC   D A ++F  + + D+VSWN+++S Y L   G  AL L+  M  E   P
Sbjct: 561 SLISMYSKCCDSDDAIKVFNTMQEHDVVSWNSLISCYILQRNGNEALALWSRMNEEEIKP 620

Query: 564 DDISILGVLQACIYSGLSEGGIC--LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
           D I++  V+ A  Y+  ++   C  LF  ++ IY + P  EH+   V +LG  G L EA 
Sbjct: 621 DMITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAE 680

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
           + INS PF     + R L+   ++ +N+  +   +K +L  +P++   +IL SN+Y+  G
Sbjct: 681 DTINSMPFQPEVSVLRALLDSCRVHSNTSVAKRVAKLVLSTKPENPSEYILKSNIYSASG 740

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE-M 740
           +   +  +R  M +    K    SWI  + K+H F A    HP+ ++IYS L++L  E +
Sbjct: 741 LWHRSEMIREEMRERGYRKHPSKSWIIHEKKVHSFHARDTSHPQEKDIYSGLEILIMECL 800

Query: 741 KLKVKDSSAFELQD 754
           K   + ++ F LQ+
Sbjct: 801 KSGYEPNTEFVLQE 814


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 209/669 (31%), Positives = 331/669 (49%), Gaps = 103/669 (15%)

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF- 230
            +D   G+ IHA  IK+G    VF+  +L++ Y  +G   +A  VF  +  K V   N  
Sbjct: 26  FKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNII 85

Query: 231 ------------------------------MILEYNKAGESEMAFHVFVHLLSSDFEPND 260
                                         MI+ YN+ G+ E A  +F  ++S D  P  
Sbjct: 86  LSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQ 145

Query: 261 YTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +T TNV++ C   E LG+  G+++H   VK G+   ISV N+++ MY K G    A+ +F
Sbjct: 146 FTLTNVLASCAAVECLGI--GRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVF 203

Query: 319 DAIS-------------------------------ERNLISWTALISGYVRSGHGGKAIN 347
           D +                                ER+++SW A+ISGY + G   +A++
Sbjct: 204 DRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALD 263

Query: 348 GFLEFL-DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS------------ 394
            F + L D     D   LA+ +  C+   NL+LG Q+H   I+  + +            
Sbjct: 264 IFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMY 323

Query: 395 ---------------------DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
                                DV   TAL+D Y K GD+  AR + D    +    + A+
Sbjct: 324 SKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAM 383

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + G+++   +  +D M LF      G +P+  T + +LS+S+S A L  GR +HA + ++
Sbjct: 384 IVGYVQNGFN--QDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRS 441

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGLGKGALLL 552
           G A+ V V NALITMYAK GSI+ A  +F  I   RD ++W +M+ A A HGLG+ AL L
Sbjct: 442 GNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTL 501

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           FE M   G  PD I+ +GVL AC + GL E G   +N ++  + + P   H+ACM+DL G
Sbjct: 502 FERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFG 561

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG L EA   I + P     + W +L++  K+  N + + +A++RLL +EP+++G++  
Sbjct: 562 RAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSA 621

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           ++N+Y+  G  + AA +R +M D  + K+ G SW++I +K+H F      HP+ + IY  
Sbjct: 622 LANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEM 681

Query: 733 LDLLNDEMK 741
           +  +  E+K
Sbjct: 682 MAKIWKEIK 690



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/573 (24%), Positives = 254/573 (44%), Gaps = 115/573 (20%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS------------- 123
           G+++HA ++K+G     F  NNL+N YAK   +  A ++FD M V+S             
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 124 ------------------AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
                             +++WT++I GY   G +E+ +G+  +M   +    + T + +
Sbjct: 92  GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-- 223
           L +C+ +E    G ++H+F +K G  + + V  SL++MY  SG    A+ VF  +  K  
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211

Query: 224 -----------------------------DVRCVNFMILEYNKAGESEMAFHVFVH-LLS 253
                                        DV   N MI  YN+ G    A  +F   L+ 
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE- 312
           S  +P+ +T  + +S C     ++ GKQ+H   ++       +VGNA+++MY K G  E 
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331

Query: 313 --------------------------------EAERMFDAISERNLISWTALISGYVRSG 340
                                            A R+FD++  R++++WTA+I GYV++G
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
               A+  F   +  G   ++  LAT++   S  ++L+ G Q+H  A + G  S V +  
Sbjct: 392 FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSN 451

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           AL+ +YAK G +  AR + +    K  T  + +++    +      E+ + LF +    G
Sbjct: 452 ALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLG--EEALTLFERMLENG 509

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLH-----AYSI---KTGYAADVIVGNALITMYAK 511
           ++PD +T+  +LS       + +GRS +     A+ I    + YA        +I ++ +
Sbjct: 510 IKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYA-------CMIDLFGR 562

Query: 512 CGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            G +  A    + +  + D+++W ++L++  +H
Sbjct: 563 AGLLQEAHAFIENMPIEPDVIAWGSLLASCKVH 595



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 244/595 (41%), Gaps = 144/595 (24%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAK----------FNRL-------------- 109
           L +G+ VH+F++K G  +    AN+L+N+YAK          F+R+              
Sbjct: 161 LGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISS 220

Query: 110 -------DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR-SEEKFNEHT 161
                  D+AQ  F+ M+ R  ++W ++I GY   G     L I   M   S  K ++ T
Sbjct: 221 HMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFT 280

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC------------ 209
            +  L AC+ LE+   G+QIHA  I++ F+    VG +LISMY  SG             
Sbjct: 281 LASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSM 340

Query: 210 ---------------------FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
                                   A  +F  L  +DV     MI+ Y + G ++ A  +F
Sbjct: 341 ISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELF 400

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             ++    +PN+YT   ++SV      ++ G+Q+H  A + G    +SV NA++TMY K 
Sbjct: 401 RSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKS 460

Query: 309 GMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
           G   +A  +F+ I  +R+ I+WT++I    + G G +A+  F   L+ GI  D      V
Sbjct: 461 GSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGV 520

Query: 368 IDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           +  C+    +E G   +      H  +        ++D++ + G L+ A           
Sbjct: 521 LSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAH---------- 570

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS------------LS 474
                     F+E +                  +EPD + +  LL+            ++
Sbjct: 571 ---------AFIENMP-----------------IEPDVIAWGSLLASCKVHKNVELAEVA 604

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI---- 530
           A +  L+   +  AYS             AL  +Y+ CG  + A  I K + D+ +    
Sbjct: 605 AERLLLIEPENSGAYS-------------ALANVYSACGQWENAANIRKSMKDKGVKKDQ 651

Query: 531 -VSWNAMLSAYALHGLGKG-----------ALLLFEEMKREGFAPDDISILGVLQ 573
             SW  + +   + G+  G              +++E+K+ GF PD  S+L  L+
Sbjct: 652 GFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLE 706



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 146/300 (48%), Gaps = 40/300 (13%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEA--NNLINLYAKFNRLDVAQKL--------------- 115
           +LKLG+ +HA ++++  + DTF A  N LI++Y+K   +++AQK+               
Sbjct: 293 NLKLGKQIHAHIIRT--EFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFT 350

Query: 116 ------------------FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF 157
                             FD + VR  + WT++I GY+ +G  +  + +   M +   K 
Sbjct: 351 ALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKP 410

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           N +T + +L   S L     G QIHA A +SG  ++V V  +LI+MY  SG   +A  VF
Sbjct: 411 NNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVF 470

Query: 218 RGLAYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
             + +K D      MI+   + G  E A  +F  +L +  +P+  T+  V+S C     V
Sbjct: 471 NLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLV 530

Query: 277 EEGKQLHGLAVK-FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
           E+G+  + L      ++   S    ++ ++G+ G+ +EA    + +  E ++I+W +L++
Sbjct: 531 EQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLA 590


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 198/634 (31%), Positives = 324/634 (51%), Gaps = 78/634 (12%)

Query: 197 GTSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            TSL+S Y  +G  R++   F  +  A +D    N MI  + +A  +  A  VF  LL+S
Sbjct: 92  ATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLAS 151

Query: 255 D--FEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK--- 307
           D    P+DY+FT+++S      +L V    QLH    K G    +SV NA++ +Y K   
Sbjct: 152 DDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDA 211

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE---------------F 352
            G++ +A ++ D + E++ ++WT ++ G+VR G    A + F E               +
Sbjct: 212 PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGY 271

Query: 353 LDLGICCDSSCL-------------ATVIDGCSVCSNLELGLQLHGFAIKHGYL------ 393
           +  G+C ++  L              T     S C+N   G  LHG ++   ++      
Sbjct: 272 VQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACAN--AGFFLHGKSVHGQFIRLQPDF 329

Query: 394 ---SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE----- 445
              + + +  ALV +Y+K G +  A  + D  + K    +N ILSG++E    D      
Sbjct: 330 VPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIF 389

Query: 446 ------------------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
                                   ED + LF+Q R   ++P   T++  ++       L 
Sbjct: 390 KEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALK 449

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ LHA+ ++ G+ A    GNAL+TMYA+CG++  A  +F  + + D VSWNAM+SA  
Sbjct: 450 HGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALG 509

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HG G+ AL LF++M  +G  PD IS L +L AC ++GL + G   F  +E+ +G+ P  
Sbjct: 510 QHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGE 569

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           +H+A ++DLLGRAGR+ EA +LI + PF  +P +W  ++S  ++  + +    A+ +L  
Sbjct: 570 DHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFK 629

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           + P+  G++IL+SN Y+  G   +AA+VR  M D  + KE GCSWIE+ +K+H F+    
Sbjct: 630 MVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDT 689

Query: 722 DHPESEEIYSKLDLLNDEM-KLKVKDSSAFELQD 754
            HP++ E+Y  L+++  +M KL     + F LQD
Sbjct: 690 KHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQD 723



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 184/432 (42%), Gaps = 79/432 (18%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDV---AQKLFDGMLVRSAITWTSLIKGYLD 136
           +H  + K G+      +N LI LY K +   V   A+K+ D M  +  +TWT+++ G++ 
Sbjct: 183 LHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVR 242

Query: 137 DGD-------YESVLGI--------------------ACDMYR----SEEKFNEHTCSVI 165
            GD       +E + G                     A +++R         +E T + +
Sbjct: 243 KGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSL 302

Query: 166 LEACSLLEDRIFGEQIHAFAI-----------------------KSG--------FEN-- 192
           L AC+     + G+ +H   I                       KSG        F++  
Sbjct: 303 LSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMT 362

Query: 193 --NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             +V    +++S Y  SGC   A  +F+ + YK       M+  Y   G +E A  +F  
Sbjct: 363 LKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQ 422

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + S D +P DYT+   ++ C E   ++ GKQLH   V+ G     S GNA++TMY + G 
Sbjct: 423 MRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGA 482

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            ++A  +F  +   + +SW A+IS   + GHG +A+  F + +  GI  D     T++  
Sbjct: 483 VKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTA 542

Query: 371 CSVCSNLELGLQL-----HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           C+    ++ G Q        F I  G     R    L+D+  + G +  AR L+     +
Sbjct: 543 CNHAGLVDDGFQYFESMERDFGISPGEDHYAR----LIDLLGRAGRIGEARDLIKTMPFE 598

Query: 426 YT-AEFNAILSG 436
            T A + AILSG
Sbjct: 599 PTPAIWEAILSG 610



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 2/259 (0%)

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           AV   +  S +  D    N +++ Y +   LD A ++F  M  +S ++W  ++ GY+  G
Sbjct: 352 AVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGG 411

Query: 139 DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
             E  L +   M   + K  ++T +  + AC  L     G+Q+HA  ++ GFE +   G 
Sbjct: 412 LAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGN 471

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +L++MY   G  ++A  VF  +   D    N MI    + G    A  +F  +++    P
Sbjct: 472 ALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYP 531

Query: 259 NDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           +  +F  +++ C     V++G Q    +   FG+         ++ + G+ G   EA  +
Sbjct: 532 DRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDL 591

Query: 318 FDAIS-ERNLISWTALISG 335
              +  E     W A++SG
Sbjct: 592 IKTMPFEPTPAIWEAILSG 610


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 168/570 (29%), Positives = 315/570 (55%), Gaps = 9/570 (1%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +HA  IK+G     FV + L+++Y   G    A  VF  L  ++V     ++  Y +  +
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E+A  VF  +L S   P+++T +  ++ C     +  GKQ H   +K+ +  + S+GNA
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           + ++Y K G  + + + F    E+++ISWT +IS    +G  G  +  F+E L   +  +
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              L +V+  CS   + +LG+Q+H  + K G+ S++R+  +LV +Y K G +  A+ L +
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 421 GFSCKYTAEFNAILSGFME--KIADDE-------EDVMVLFSQQRLAGMEPDPVTFSRLL 471
               K    +NA+++G  +   +A D         + + ++ +   +G +PD  T S +L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           ++ +  A L +G  +HA +IK+G+ +DV+VG AL+ MY KCGSI+ A + F  +S R ++
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           SW +M++++A HG  + AL LFE+M+  GF P+ I+ +GVL AC ++G+ +  +  F  +
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
           ++ Y ++P+++H+ C+VD+  R GRL EA ++I       +  +W  L++  +   N + 
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
              A+++LL L+P+   +++++ NMY      ++ + VR  M + ++ K    S I I  
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKG 541

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           ++H F  + + H  + E+++ L+ L D  K
Sbjct: 542 EVHSFKTNNRLHNHNAELHTLLNDLVDRAK 571



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 240/458 (52%), Gaps = 18/458 (3%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           VHA ++K+G+  + F  + L+N+YAK   +  A+K+FD +  R+ + WT+L+ GY+ +  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            E  + +  DM  S    +  T S+ L ACS LE    G+Q HAF IK    ++  +G +
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L S+Y   G    +   FR    KDV     +I      G + M   +F+ +L  + EPN
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
           D+T T+V+S+C      + G Q+H L+ K G    + + N++V +Y K G  +EA+ +F+
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 320 AISERNLISWTALISGYVRS-----------GHGGKAINGFLEFLDLGICCDSSCLATVI 368
            +  +NLI+W A+I+G+ ++             G +A+  +L+    G   D   L++++
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS  + LE G Q+H   IK G+LSDV +GTALVD+Y K G ++ AR      S +   
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            + ++++ F        +  + LF   RLAG  P+ +TF  +L+ + S A +V   +L  
Sbjct: 362 SWTSMITSFARH--GQSQHALQLFEDMRLAGFRPNQITFVGVLA-ACSHAGMV-DEALEY 417

Query: 489 YSI-KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFK 523
           + I +  Y    ++ +   L+ M+ + G +D AF + K
Sbjct: 418 FEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIK 455



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 177/355 (49%), Gaps = 14/355 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           + LG+  HAF++K    +D+   N L +LY+KF  LD + K F     +  I+WT++I  
Sbjct: 97  ITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISA 156

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
             D+G     L +  +M     + N+ T + +L  CS ++    G Q+H+ + K G E+N
Sbjct: 157 CGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESN 216

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE-----------SE 242
           + +  SL+ +Y   GC  EA+N+F  + YK++   N MI  + +A +             
Sbjct: 217 LRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGT 276

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  +++ L  S  +P+ +T +++++VC     +E+G+Q+H   +K G + ++ VG A+V
Sbjct: 277 EALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALV 336

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G  E A + F  +S R LISWT++I+ + R G    A+  F +    G   +  
Sbjct: 337 DMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQI 396

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV--RLGTALVDIYAKGGDLKSA 415
               V+  CS    ++  L+      K   +  V    G  LVD++ + G L  A
Sbjct: 397 TFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYG-CLVDMFVRLGRLDEA 450


>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 183/586 (31%), Positives = 323/586 (55%), Gaps = 2/586 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G   + LG+ VH  +   G + D F  ++LI  Y++   +  A+ LFD M 
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            +  + W  ++ GY+ +GD+++  G+  +M R+E   N  T + +L  C+      FG Q
Sbjct: 210 SKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQ 269

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H   + SG E +  V  +L++MY   G   +A  +F  +   D+   N MI  Y + G 
Sbjct: 270 LHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGF 329

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + A  +F  ++S+  +P+  TF++ + +  E   + +GK++H   ++ GV  ++ + +A
Sbjct: 330 MDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSA 389

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ +Y K    E A ++FD  +  +++  TA+ISGYV +G    A+  F   L   +  +
Sbjct: 390 LIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRAN 449

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           S  LA+V+  C+  + L LG +LHG  +K+G+     +G+A++D+YAK G L  A     
Sbjct: 450 SVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFI 509

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
           G S K    +N++++   +      E+ + LF Q  +AG + D V+ S  LS  A+   L
Sbjct: 510 GISXKDAVCWNSMITSCSQN--GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPAL 567

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +HA+ ++  + +D+   +ALI MY+KCG++D A ++F  + +++ VSWN++++AY
Sbjct: 568 HYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAY 627

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG  K +L LF  M  +G  PD ++ L ++ AC ++G  + GI  F  + +  G+   
Sbjct: 628 GNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMAR 687

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
           +EH+ACMVDL GRAGRL+EA  +INS PFS    +W   + +   M
Sbjct: 688 MEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYLELVDFM 733



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 161/518 (31%), Positives = 264/518 (50%), Gaps = 7/518 (1%)

Query: 62  PQLVKISIGSGD---LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           PQLV I     D   L  G+  HA +L +G   +      L+ +Y        A+ +F  
Sbjct: 47  PQLVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQ 106

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           + +  +  W  +I+G+   G ++  L     M       +++T   +++AC  L     G
Sbjct: 107 LRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H      GFE +VFVG+SLI  Y  +GC  +A  +F  +  KD    N M+  Y K 
Sbjct: 167 RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKN 226

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G+ + A  VF+ +  ++  PN  TF  V+SVC   + +  G QLHGL V  G+  +  V 
Sbjct: 227 GDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVA 286

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N ++ MY K G   +A R+FD + + +L++W  +ISGYV++G   +A   F E +  G+ 
Sbjct: 287 NTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMK 346

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            DS   ++ +   S  + L  G ++H + I++G   DV L +AL+DIY K  D++ A  +
Sbjct: 347 PDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKI 406

Query: 419 LDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
            D  +        A++SG+ +  + ++  ++     Q+R   M  + VT + +L   A  
Sbjct: 407 FDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER---MRANSVTLASVLPACAGL 463

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L  G+ LH + +K G+     VG+A++ MYAKCG +D A Q F GIS +D V WN+M+
Sbjct: 464 AALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMI 523

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           ++ + +G  + A+ LF +M   G   D +SI   L AC
Sbjct: 524 TSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 561


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 176/581 (30%), Positives = 303/581 (52%), Gaps = 35/581 (6%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N+F   +L+S   H+    + +++F  +A +D    N +I  ++  G    A  ++  LL
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 253 --SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG- 309
              S   P+  T + ++           G+Q H   ++ G      VG+ +V MY K G 
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190

Query: 310 ------------------------------MSEEAERMFDAISERNLISWTALISGYVRS 339
                                         M EEA R+F+ +++R+ I+WT +++G+ ++
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G   +A+N F      GI  D     +++  C   S LE G Q+H + I+  Y  +V +G
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           +ALVD+Y+K   +K A       SCK    + A++ G+ +      E+ + +FS+ +  G
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGC--SEEAVRVFSEMQRDG 368

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           ++PD  T   ++S  A+ A L  G   H  ++ +G    + V NAL+T+Y KCGSI+ A 
Sbjct: 369 IDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           ++F  +   D VSW A+++ YA  G  K  + LFE+M  +   PD ++ +GVL AC  +G
Sbjct: 429 RLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
             E G   F+ +++ +G+ PI +H+ CM+DL  R+GRL EA   I   P     + W TL
Sbjct: 489 FVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTL 548

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           +S  +L  + +    A++ LL+++P++  S++L+ +M+A +G  ++ A++R  M D ++ 
Sbjct: 549 LSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVK 608

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           KE GCSWI+  +K+H F A  + HP S+ IY KL+ LN +M
Sbjct: 609 KEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKM 649



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 245/553 (44%), Gaps = 99/553 (17%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK----------FNRLD----------- 110
           GD  LG+  H  +L+ G   + F  + L+ +YAK          F+ +D           
Sbjct: 154 GDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMI 213

Query: 111 ----------VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
                      A++LF+ M  R  ITWT+++ G+  +G     L     M       +++
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQY 273

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   IL AC  L     G+QIHA+ I++ +++NVFVG++L+ MY      + AE  FR +
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRM 333

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
           + K++     +I+ Y + G SE A  VF  +     +P+D+T  +VIS C     +EEG 
Sbjct: 334 SCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGA 393

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           Q H LA+  G++  I+V NA+VT+YGK G  E+A R+FD +   + +SWTAL++GY + G
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFG 453

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLG 399
              + I+ F + L   +  D      V+  CS    +E G    H     HG +      
Sbjct: 454 RAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHY 513

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           T ++D+Y++ G LK A                     F++++                  
Sbjct: 514 TCMIDLYSRSGRLKEA-------------------EEFIKQMP----------------- 537

Query: 460 MEPDPVTFSRLLSLSASQACLVRG-------RSLHAYSIKTGYAADVIVGNALITMYAKC 512
           M PD + +  LLS     AC +RG        + +   I     A  ++   L +M+A  
Sbjct: 538 MHPDAIGWGTLLS-----ACRLRGDMEIGQWAAENLLEIDPQNPASYVL---LCSMHATK 589

Query: 513 GSIDGAFQIFKGISDRDI-----VSWNAMLSAYAL-------HGLGKGALLLFE----EM 556
           G+ +   Q+ +G+ DR +      SW    +   +       H   KG     E    +M
Sbjct: 590 GNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKM 649

Query: 557 KREGFAPDDISIL 569
             EG+ PD  S+L
Sbjct: 650 LEEGYKPDVSSVL 662



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 218/486 (44%), Gaps = 37/486 (7%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR- 152
           F  N L++  A    LD    LF  M  R  +++ ++I G+   G +   + +   + R 
Sbjct: 73  FTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRA 132

Query: 153 -SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
            S  + +  T S ++ A S L DR  G Q H   ++ GF  N FVG+ L+ MY   G   
Sbjct: 133 GSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIG 192

Query: 212 EAENVFRGLAYKDV-----------------------------RCVNF--MILEYNKAGE 240
           +A+ VF  +  K+V                              C+ +  M+  + + G 
Sbjct: 193 DAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGL 252

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              A + F  +       + YTF ++++ C     +E+GKQ+H   ++      + VG+A
Sbjct: 253 ESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSA 312

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V MY K    + AE  F  +S +N+ISWTALI GY ++G   +A+  F E    GI  D
Sbjct: 313 LVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPD 372

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              L +VI  C+  ++LE G Q H  A+  G +  + +  ALV +Y K G ++ A  L D
Sbjct: 373 DFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFD 432

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                    + A+++G+ +      ++ + LF +     ++PD VTF  +LS  +    +
Sbjct: 433 EMLFHDQVSWTALVTGYAQ--FGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFV 490

Query: 481 VRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
            +G S  H+     G          +I +Y++ G +  A +  K +    D + W  +LS
Sbjct: 491 EKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550

Query: 539 AYALHG 544
           A  L G
Sbjct: 551 ACRLRG 556


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 308/563 (54%), Gaps = 2/563 (0%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           + IHA  ++   + + ++   ++      G    ++ VF  +   ++   N MI      
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              + A H++  +    F PN++T   V+  C   L V  G ++H L VK G   ++ V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            +++++Y K    ++A ++FD I ++N++SWTA+I+GY+ SGH  +AI  F + L++G+ 
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            DS  L  V+  C+   +   G  +  +    G   +V + T+L+D+Y K G+L+ A ++
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                 K    ++ ++ G+        +  + LF Q +   ++PD  T   +LS  A+  
Sbjct: 273 FSAMPEKDIVSWSTMIQGY--AFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLG 330

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L  G    +   +  + ++ ++G ALI MY+KCGS+  A++IF  +  +D V WNAM+ 
Sbjct: 331 ALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMV 390

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
             +++G  K    LF  +++ G  PD+ + +G+L  C + G    G   FN +++++ L 
Sbjct: 391 GLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLT 450

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P +EH+ CMVDLLGRAG L+EA  LIN+ P   + ++W  L+   KL  ++  +    K+
Sbjct: 451 PSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKK 510

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L++LEP ++G+++ +SN+Y+G    +EA K+R+TM + ++ K   CSWIEID  +H F+ 
Sbjct: 511 LIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLV 570

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
             K H  SE+IY+KLD L  E+K
Sbjct: 571 GDKSHWLSEKIYAKLDELGRELK 593



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 216/469 (46%), Gaps = 6/469 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA LL+     D +  N ++     F   + ++ +F  +   +   W ++I+G +  
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
             ++  + +   M       N  T   +L+AC+   D   G +IH+  +K+G++++VFV 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           TSL+S+Y     F +A  VF  +  K+V     +I  Y  +G    A   F  LL    +
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+ ++   V++ C        G+ +       G+ R + V  +++ MY K G  E A  +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F A+ E++++SW+ +I GY  +G   +A++ F +     +  D   +  V+  C+    L
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           +LG+       ++ +LS+  LGTAL+D+Y+K G +  A  +      K    +NA++ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGL 392

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
              +    + V  LFS     G+ PD  TF  LL        +  GR     ++K  ++ 
Sbjct: 393 --SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN-NMKRVFSL 449

Query: 498 DVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
              + +   ++ +  + G ++ A Q+   +  + + V W A+L    LH
Sbjct: 450 TPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 176/377 (46%), Gaps = 2/377 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K      D++LG  +H+ L+K+G  +D F   +L++LY K +  D A K+FD +  
Sbjct: 118 PFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD 177

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           ++ ++WT++I GY+  G +   +G    +     K +  +   +L AC+ L D   GE I
Sbjct: 178 KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWI 237

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
             +   SG   NVFV TSL+ MY   G    A  +F  +  KD+   + MI  Y   G  
Sbjct: 238 DRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  +F  + S + +P+ YT   V+S C     ++ G     L  +   +    +G A+
Sbjct: 298 QQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTAL 357

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K G   +A  +F A+ +++ + W A++ G   +GH     + F      GI  D 
Sbjct: 358 IDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDE 417

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLD 420
           +    ++ GC+    +  G Q      +   L+  +     +VD+  + G L  A  L++
Sbjct: 418 NTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLIN 477

Query: 421 GFSCKYTA-EFNAILSG 436
               K  A  + A+L G
Sbjct: 478 NMPMKPNAVVWGALLGG 494


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 192/676 (28%), Positives = 349/676 (51%), Gaps = 12/676 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFE-----ANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
           +L   + +HA LL  G    T       A+ L+N+Y  F  L  A   F  +  +  I W
Sbjct: 42  NLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAW 101

Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
            ++++G +  G +   +     M +     + +T  ++L+ACS L     G  +H   + 
Sbjct: 102 NAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMH 160

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
              + NV+V  ++I M+   G   +A  +F  +  +D+     +I      GE   A  +
Sbjct: 161 GKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLL 220

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  + S    P+     +++  C     V+ G  L   AV+ G   ++ V NA++ MY K
Sbjct: 221 FRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCK 280

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G   EA R+F  +   +++SW+ LI+GY ++    ++   ++  +++G+  ++    +V
Sbjct: 281 CGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSV 340

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +        L+ G ++H F +K G +SDV +G+AL+ +YA  G +K A  + +  S K  
Sbjct: 341 LPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDI 400

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME--PDPVTFSRLLSLSASQACLVRGRS 485
             +N+++ G+   +  D E     F+ +R+ G E  P+ +T   +L +      L +G+ 
Sbjct: 401 MVWNSMIVGY--NLVGDFESA--FFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKE 456

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +H Y  K+G   +V VGN+LI MY+KCG ++   ++FK +  R++ ++N M+SA   HG 
Sbjct: 457 IHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQ 516

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G+  L  +E+MK EG  P+ ++ + +L AC ++GL + G  L+N +   YG+ P +EH++
Sbjct: 517 GEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYS 576

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           CMVDL+GRAG L  A   I   P +    ++ +L+   +L    + + L ++R+L L+  
Sbjct: 577 CMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKAD 636

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           D+G ++L+SN+YA     ++ +KVR+ + D  L K+ G SWI++   ++ F A+   HP 
Sbjct: 637 DSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPA 696

Query: 726 SEEIYSKLDLLNDEMK 741
             +I   L+ L   MK
Sbjct: 697 FAKIEETLNSLLLVMK 712



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 5/134 (3%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ I    G L+ G+ +H ++ KSG   +    N+LI++Y+K   L++ +K+F  M+VR+
Sbjct: 441 ILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRN 500

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL--LEDR---IFG 178
             T+ ++I      G  E  L     M     + N+ T   +L ACS   L DR   ++ 
Sbjct: 501 VTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYN 560

Query: 179 EQIHAFAIKSGFEN 192
             I+ + I+   E+
Sbjct: 561 SMINDYGIEPNMEH 574


>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 217/744 (29%), Positives = 347/744 (46%), Gaps = 110/744 (14%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLY---AKFNRLDVAQKLFDGML 120
           L+K     G +  G  +HA L+K+G  +  + A  L+ LY    KF  +D   K FDG  
Sbjct: 27  LLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDG-- 84

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               +    +I  Y+  G+                               L++ R+  ++
Sbjct: 85  -SDLVVSNCMISAYVQWGN-------------------------------LVQARLLFDE 112

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +         E N    ++LIS     G   E+   F    +++V      I  + + G 
Sbjct: 113 MP--------ERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGL 164

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +  A  +F  LL S   PND TFT+V+  C E      G  + GL VK G    +SV N+
Sbjct: 165 NFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNS 224

Query: 301 IVTM-------------------------------YGKHGMSEEAERMFDAISERNLISW 329
           ++T+                               Y + G   EA R+FD + ERN ISW
Sbjct: 225 LITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISW 284

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           +A+I+ Y +SG+  +A+  F + +  G   + SC A  +   +    L  G+ +HG   K
Sbjct: 285 SAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTK 344

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLD---------------GFSC---------- 424
            G   DV +G++L+D+Y K G     R++ D               G+S           
Sbjct: 345 IGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEEL 404

Query: 425 ------KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                 K    +  I++G++E   +  E V+ +F+   ++G  P+  TFS +L   AS A
Sbjct: 405 FELIPEKNDVSWGTIIAGYLEN--EQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIA 462

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L +G ++H   IK G   D+ VG AL  MYAKCG I  + Q+F+ + +++ +SW  M+ 
Sbjct: 463 SLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQ 522

Query: 539 AYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             A  G    +L+LFEEM+R    AP+++ +L VL AC + GL + G+  FN +E++YG+
Sbjct: 523 GLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGI 582

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
           +P  +H+ C+VDLL R+GRL EA   I + PF      W  L+S  K   + K +   +K
Sbjct: 583 KPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAK 642

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +L  L   ++  ++L+SN+YA  G   + + +R  M +  L K  GCSW+E+ +++H F 
Sbjct: 643 KLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFY 702

Query: 718 ASGKDHPESEEIYSKLDLLNDEMK 741
           +    H +S EIY  L LL  EMK
Sbjct: 703 SEDGSHSQSNEIYGTLQLLRSEMK 726


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 175/547 (31%), Positives = 290/547 (53%), Gaps = 37/547 (6%)

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            + + F   +L+S Y  SG  +  +  F  + ++D    N  I  ++     + +  +F 
Sbjct: 85  LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +    FEP +YT  ++++   + L +  GKQ+HG  +    +  + + NA+  MY K G
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E+A  +FD ++++NL+SW  +ISGY ++G   K I G L  + L              
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCI-GLLHQMRLS------------- 250

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
                                G++ D    + ++  Y + G +  AR +   F  K    
Sbjct: 251 ---------------------GHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVC 289

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A++ G+ +     EED ++LF++  L  +EPD  T S ++S  A  A L  G+++H  
Sbjct: 290 WTAMMVGYAKN--GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK 347

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           SI  G   +++V +ALI MY+KCG ID A  +F  +  R++VSWNAM+   A +G  K A
Sbjct: 348 SILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDA 407

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LFE M ++ F PD+++ +G+L AC++    E G   F+ I   +G+ P L+H+ACMV+
Sbjct: 408 LELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVN 467

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGR GR+ +A+ LI +       L+W TL+S+     +   + +A++ L +L+P  A  
Sbjct: 468 LLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVP 527

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           +I++SNMYA  G   + A VR  M    + K AG SWIEID+++H F +  + HPESE+I
Sbjct: 528 YIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDI 587

Query: 730 YSKLDLL 736
           Y KL++L
Sbjct: 588 YEKLNML 594



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 228/528 (43%), Gaps = 71/528 (13%)

Query: 51  CSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRL 109
           CS  T     + QLV   + + ++   + + + +     Q  D+F  N L++LYAKF +L
Sbjct: 15  CSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKL 74

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL----------------------GIA 147
             AQ LFD ML R   +W +L+  Y   G  +++                       G +
Sbjct: 75  RDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNS 134

Query: 148 CD---------MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
           C          M R   +  E+T   IL A + L D  +G+QIH   I   F  NVF+  
Sbjct: 135 CPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWN 194

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +L  MY   G   +A  +F  L  K++   N MI  Y K G+ E    +   +  S   P
Sbjct: 195 ALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMP 254

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +  T + +I+                                    Y + G  +EA R+F
Sbjct: 255 DQVTMSTIIAA-----------------------------------YCQCGRVDEARRVF 279

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
               E++++ WTA++ GY ++G    A+  F E L   I  DS  L++V+  C+  ++L 
Sbjct: 280 SEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLH 339

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
            G  +HG +I  G  +++ + +AL+D+Y+K G +  AR + +    +    +NA++ G  
Sbjct: 340 HGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCA 399

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGYAA 497
           +   D  +D + LF        +PD VTF  +LS       + +G+    + S + G   
Sbjct: 400 QNGHD--KDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTP 457

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
            +     ++ +  + G I+ A  + K ++ D D + W+ +LS  +  G
Sbjct: 458 TLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 48/232 (20%)

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG------------ 544
            D  + N L+ +YAK G +  A  +F  +  RD  SWNA+LSAYA  G            
Sbjct: 56  TDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRM 115

Query: 545 -------------------LGKGALLLFEEMKREGFAPDDISILGVLQACI------YSG 579
                                + +L LF+ M+REGF P + +I+ +L A        Y  
Sbjct: 116 PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGK 175

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
              G I + N +  ++        +  + D+  + G + +A  L +     ++ + W  +
Sbjct: 176 QIHGSIIVRNFLGNVFI-------WNALTDMYAKCGEIEQARWLFDCLT-KKNLVSWNLM 227

Query: 640 VS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
           +S             +L   RL    P D  +   +   Y   G +DEA +V
Sbjct: 228 ISGYAKNGQPEKCIGLLHQMRLSGHMP-DQVTMSTIIAAYCQCGRVDEARRV 278


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 190/617 (30%), Positives = 320/617 (51%), Gaps = 43/617 (6%)

Query: 155 EKFNEHTCSVILEACSLLED-RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR-- 211
           +    H    +L  C  L+  RI    IHA  IK G  N  +  + LI     S  F   
Sbjct: 29  DSIRNHPSLSLLHNCKTLQSLRI----IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGL 84

Query: 212 -EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
             A +VF+ +   ++   N M   +  + +   A  ++V ++S    PN YTF  V+  C
Sbjct: 85  PYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 144

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA---------------- 314
            ++   +EG+Q+HG  +K G   ++ V  ++++MY ++G  E+A                
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204

Query: 315 ---------------ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
                          +++FD I  ++++SW A+ISGY  +G+  +A+  F + +   +  
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D S + TV+  C+   ++ELG Q+H +   HG+ S++++  AL+D+Y+K G+L++A  L 
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    K    +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   A    
Sbjct: 325 ERLPYKDVISWNTLIGGYTH--MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382

Query: 480 LVRGRSLHAYSIK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           +  GR +H Y  K   G      +  +LI MYAKCG I+ A Q+F  I  + + SWNAM+
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             +A+HG    +  LF  M++ G  PDDI+ +G+L AC +SG+ + G  +F  + Q Y +
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P LEH+ CM+DLLG +G   EA  +IN        ++W +L+   K+  N +     ++
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            L+ +EP++ GS++L+SN+YA  G  +E AK R  +ND  + K  GCS IEIDS +H F+
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 622

Query: 718 ASGKDHPESEEIYSKLD 734
              K HP + EIY  L+
Sbjct: 623 IGDKFHPRNREIYGMLE 639



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 176/390 (45%), Gaps = 42/390 (10%)

Query: 30  NTFSPNPKSQVA-YLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLK 86
           +  S +P S +  Y+C IS        LL N +  P ++K    S   K GQ +H  +LK
Sbjct: 109 HALSSDPVSALKLYVCMIS------LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162

Query: 87  SGSQNDTFEANNLINLYAKFNRL-------------DV------------------AQKL 115
            G   D +   +LI++Y +  RL             DV                  AQKL
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FD + V+  ++W ++I GY + G+Y+  L +  DM ++  + +E T   ++ AC+     
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G Q+H +    GF +N+ +  +LI +Y   G    A  +F  L YKDV   N +I  Y
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
                 + A  +F  +L S   PND T  +++  C     ++ G+ +H    K   GV  
Sbjct: 343 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             S+  +++ MY K G  E A ++F++I  ++L SW A+I G+   G    + + F    
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQL 383
            +GI  D      ++  CS    L+LG  +
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHI 492


>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
          Length = 671

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 191/640 (29%), Positives = 336/640 (52%), Gaps = 10/640 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           +AVH   +K G    T+  NNL+  Y     L  A+ +FD M  R+ ++W+ LI      
Sbjct: 22  RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRL 81

Query: 138 GDYESVLGIACDMYRSEEK--FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           G     L +   M R  E+   N  T + ++  C+  +D + GEQ+HA A+K G + +  
Sbjct: 82  GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---LEYNKAGESEMAFHVFVHLL 252
           V  +L+ MY   G    +   F     + V     MI   + +  +G  + A  +F  +L
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                P + TF+ ++ V      +  GKQ+HG  VK G   + ++G A++ MYG+ G  +
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           E  R+   I   +  S T+L++ Y R+G   +A+  F + L   +  D S + +++  CS
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCS 320

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               L +  ++H +A+K+ +  D  L  A+V +Y K GD+ S+ ++ +    K T  + A
Sbjct: 321 SLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTA 380

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +L+ +++   D  ++ +  F +    G+E      + +L   ++ + L  G  +H+  +K
Sbjct: 381 LLTCYVQN--DLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVK 438

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G   D  V NAL+TMYAKCG +  A +IF    +R I+SWNA++++++ HG    A+ L
Sbjct: 439 LGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQL 498

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+ M+ E   PDD + +G+L +C   GL   G   F +++  Y L P +EH+ CMVDL  
Sbjct: 499 FDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFA 558

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAGR S+AM  I++ P     L+W  L++  ++  N     +A+K++L+++P+D   +I+
Sbjct: 559 RAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYII 618

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
           +S+++A   M DE A+ RT ++  +L K+ G S  ++DS+
Sbjct: 619 LSSIHASIDMWDEKARNRTLLDFQQLRKDVGSS--QLDSQ 656



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 239/500 (47%), Gaps = 13/500 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D   G+ VHA  +K G   D   A  L+++YAK  R+  + + F     RS ++WTS+I 
Sbjct: 120 DAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIA 179

Query: 133 GYLDDGD---YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
             ++ GD    ++ + +   M   +      T S IL+   + E    G+Q+H   +K G
Sbjct: 180 CLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMG 239

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E +  +GT+L++MY   G   E   +   + + D      ++  Y + G +  A  VF 
Sbjct: 240 TEVDPALGTALLAMYGRCGGMDEITRLACRIRH-DAFSRTSLLTAYARNGCNMEAVRVFR 298

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +L      +    T+++ VC     +   K++H  A+K     +  + NAIVT+YGK G
Sbjct: 299 DMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCG 358

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               +E +F+ +  ++ ISWTAL++ YV++    +A+  F E +  G+     C+ +V+ 
Sbjct: 359 DIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLR 418

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS  S+L  G Q+H   +K G   D  +  ALV +YAK G ++ A  + +    +    
Sbjct: 419 ACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIIS 478

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA+++ F +    +E   + LF   +   + PD  TF  LLS S S+  LV     +  
Sbjct: 479 WNALITSFSQH--GNEVAAIQLFDMMQEEMVCPDDYTFVGLLS-SCSRMGLVAEGCEYFK 535

Query: 490 SIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG-- 544
            +KT Y  +  + +   ++ ++A+ G    A +    +    D + W A+L++  +HG  
Sbjct: 536 QMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNL 595

Query: 545 -LGKGALLLFEEMKREGFAP 563
            LG+ A     E+K E  +P
Sbjct: 596 DLGRMAAKKILEIKPEDPSP 615



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 131/273 (47%), Gaps = 2/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+++    G L++ + +H + LK+  + DT   N ++ +Y K   +  ++ +F+ +  + 
Sbjct: 315 LLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKD 374

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+WT+L+  Y+ +   +  L    +M R   + +    + +L ACS       G QIH+
Sbjct: 375 TISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHS 434

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G +++  V  +L++MY   G  + A  +F     + +   N +I  +++ G    
Sbjct: 435 RVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVA 494

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIV 302
           A  +F  +      P+DYTF  ++S C     V EG +    +  K+ +  ++     +V
Sbjct: 495 AIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMV 554

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
            ++ + G   +A +  DA+  + + + W AL++
Sbjct: 555 DLFARAGRFSDAMKFIDAMPCQPDQLVWEALLA 587


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 308/563 (54%), Gaps = 2/563 (0%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           + IHA  ++   + + ++   ++      G    ++ VF  +   ++   N MI      
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              + A H++  +    F PN++T   V+  C   L V  G ++H L VK G   ++ V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            +++++Y K    ++A ++FD I ++N++SWTA+I+GY+ SGH  +AI  F + L++G+ 
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            DS  L  V+  C+   +   G  +  +    G   +V + T+L+D+Y K G+L+ A ++
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                 K    ++ ++ G+        +  + LF Q +   ++PD  T   +LS  A+  
Sbjct: 273 FSAMPEKDIVSWSTMIQGY--AFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLG 330

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L  G    +   +  + ++ ++G ALI MY+KCGS+  A++IF  +  +D V WNAM+ 
Sbjct: 331 ALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMV 390

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
             +++G  K    LF  +++ G  PD+ + +G+L  C + G    G   FN +++++ L 
Sbjct: 391 GLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLT 450

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P +EH+ CMVDLLGRAG L+EA  LIN+ P   + ++W  L+   KL  ++  +    K+
Sbjct: 451 PSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKK 510

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L++LEP ++G+++ +SN+Y+G    +EA K+R+TM + ++ K   CSWIEID  +H F+ 
Sbjct: 511 LIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLV 570

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
             K H  SE+IY+KLD L  E+K
Sbjct: 571 GDKSHWLSEKIYAKLDELGRELK 593



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 216/469 (46%), Gaps = 6/469 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA LL+     D +  N ++     F   + ++ +F  +   +   W ++I+G +  
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
             ++  + +   M       N  T   +L+AC+   D   G +IH+  +K+G++++VFV 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           TSL+S+Y     F +A  VF  +  K+V     +I  Y  +G    A   F  LL    +
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+ ++   V++ C        G+ +       G+ R + V  +++ MY K G  E A  +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F A+ E++++SW+ +I GY  +G   +A++ F +     +  D   +  V+  C+    L
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           +LG+       ++ +LS+  LGTAL+D+Y+K G +  A  +      K    +NA++ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGL 392

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
              +    + V  LFS     G+ PD  TF  LL        +  GR     ++K  ++ 
Sbjct: 393 --SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN-NMKRVFSL 449

Query: 498 DVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
              + +   ++ +  + G ++ A Q+   +  + + V W A+L    LH
Sbjct: 450 TPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 175/377 (46%), Gaps = 2/377 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K      D++LG  +H+ L+K+G  +D F   +L++LY K +  D A K+FD +  
Sbjct: 118 PFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD 177

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           ++ ++WT++I GY+  G +   +G    +     K +  +   +L AC+ L D   GE I
Sbjct: 178 KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWI 237

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
             +   SG   NVFV TSL+ MY   G    A  +F  +  KD+   + MI  Y   G  
Sbjct: 238 DRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + A  +F  + S + +P+ YT   V+S C     ++ G     L  +   +    +G A+
Sbjct: 298 QQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTAL 357

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K G   +A  +F A+  ++ + W A++ G   +GH     + F      GI  D 
Sbjct: 358 IDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDE 417

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLD 420
           +    ++ GC+    +  G Q      +   L+  +     +VD+  + G L  A  L++
Sbjct: 418 NTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLIN 477

Query: 421 GFSCKYTA-EFNAILSG 436
               K  A  + A+L G
Sbjct: 478 NMPMKPNAVVWGALLGG 494


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 169/496 (34%), Positives = 280/496 (56%), Gaps = 8/496 (1%)

Query: 252 LSSDFEPNDYTFTN-VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L   + P D  F N ++  C     + +G+ +H   ++     +I +GN ++ MY K G 
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            EEA ++F+ + +R+ ++WT LISGY +      A+  F + L  G   +   L++VI  
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            +       G QLHGF +K G+ S+V +G+AL+D+Y + G +  A+++ D    +    +
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NA+++G   +     E  + LF      G  P   +++ L    +S   L +G+ +HAY 
Sbjct: 231 NALIAGHARR--SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK+G       GN L+ MYAK GSI  A +IF  ++ RD+VSWN++L+AYA HG GK A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
             FEEM+R G  P++IS L VL AC +SGL + G   + E+ +  G+ P   H+  +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDL 407

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGRAG L+ A+  I   P   +  +W+ L++  ++  N++    A++ + +L+P D G  
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           +++ N+YA  G  ++AA+VR  M +  + KE  CSW+EI++ +H FVA+ + HP+ EEI 
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527

Query: 731 SKLDLLNDEMKLKVKD 746
            K     +E+  K+K+
Sbjct: 528 RKW----EEVLAKIKE 539



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 192/387 (49%), Gaps = 3/387 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VHA +L+S  ++D    N L+N+YAK   L+ A+K+F+ M  R  +TWT+LI GY  
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
                  L     M R     NE T S +++A +       G Q+H F +K GF++NV V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G++L+ +Y   G   +A+ VF  L  ++    N +I  + +   +E A  +F  +L   F
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ +++ ++   C     +E+GK +H   +K G       GN ++ MY K G   +A +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD +++R+++SW +L++ Y + G G +A+  F E   +GI  +     +V+  CS    
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L+ G   +    K G + +      +VD+  + GDL  A   ++    + TA   AI   
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTA---AIWKA 435

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPD 463
            +      +   +  ++ + +  ++PD
Sbjct: 436 LLNACRMHKNTELGAYAAEHVFELDPD 462



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 183/382 (47%), Gaps = 3/382 (0%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           + +L+ C++ +  I G  +HA  ++S F +++ +G +L++MY   G   EA  VF  +  
Sbjct: 64  NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +D      +I  Y++      A   F  +L   + PN++T ++VI           G QL
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           HG  VK G    + VG+A++ +Y ++G+ ++A+ +FDA+  RN +SW ALI+G+ R    
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            KA+  F   L  G        A++   CS    LE G  +H + IK G       G  L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+YAK G +  AR + D  + +    +N++L+ + +     E   +  F + R  G+ P
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE--AVWWFEEMRRVGIRP 361

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           + ++F  +L+  +    L  G   +    K G   +      ++ +  + G ++ A +  
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421

Query: 523 KGISDRDIVS-WNAMLSAYALH 543
           + +      + W A+L+A  +H
Sbjct: 422 EEMPIEPTAAIWKALLNACRMH 443



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+ G+ VHA+++KSG +   F  N L+++YAK   +  A+K+FD +  R  ++W SL
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           +  Y   G  +  +    +M R   + NE +   +L ACS
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 191/693 (27%), Positives = 344/693 (49%), Gaps = 64/693 (9%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           A  + + ++   A+ W  L++ ++++G  +  +G++C M R+  K +  T    L+AC  
Sbjct: 102 ALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGE 161

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK---DVRCV 228
           L     G   H     +GFE+NVFV  +L++MY  SG   +A  VF  +  K   DV   
Sbjct: 162 LPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISW 221

Query: 229 NFMILEYNKAGESEMAFHVF------VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           N ++  + K      A  +F      VH  +++   +  +  N++  C     + + K++
Sbjct: 222 NSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEI 281

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG-- 340
           H  A++ G   +  V NA++  Y K G  ++A  +F+ +  ++++SW A+++GY +SG  
Sbjct: 282 HSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKF 341

Query: 341 ---------------------------------HGGKAINGFLEFLDLGICCDSSCLATV 367
                                            +G +A++ F + +  G   +S  + ++
Sbjct: 342 GAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISL 401

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLS------------DVRLGTALVDIYAKGGDLKSA 415
           +  C+    L  G++ H +++K   LS            D+ +  AL+D+Y+K    K+A
Sbjct: 402 LSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAA 461

Query: 416 RMLLDGFSCK--YTAEFNAILSGFMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLL 471
           R + +    +      +  ++ G+ +    D  D + LFS+   +   + P+  T S +L
Sbjct: 462 RTIFNSIPRRERNVVTWTVMIGGYAQY--GDSNDALKLFSEMISKPYAVAPNAYTISCIL 519

Query: 472 SLSASQACLVRGRSLHAYSIKTG-YAADV-IVGNALITMYAKCGSIDGAFQIFKGISDRD 529
              A  + L  G+ +HAY  +   Y + V  V N LI MY+KCG +D A  +F  +  R+
Sbjct: 520 MACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRN 579

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
            VSW +M+S Y +HG GK AL +F++M++ GF PDDIS L +L AC +SG+ + G+  F+
Sbjct: 580 EVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFD 639

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            +   YG+    +H+AC++DLL R+GRL +A   I   P   S  +W  L+S  ++ +N 
Sbjct: 640 IMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNV 699

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           + +  A  +L+ ++ ++ GS+ L+SN+YA      + A++R  M    + K  GCSW++ 
Sbjct: 700 ELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQG 759

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
                 F    + HP S EIYS L+ L   +K+
Sbjct: 760 KKGTASFFVGDRSHPLSPEIYSLLERLIGRIKV 792



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 240/551 (43%), Gaps = 63/551 (11%)

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +GT +++ Y   G   +A +V   +        N ++  + + G  + A  V   +L + 
Sbjct: 85  LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P+ +T    +  C E      G   HGL    G    + V NA+V MY + G  E+A 
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204

Query: 316 RMFDAISER---NLISWTALISGYVRSGHGGKAINGFLEFLDL------GICCDSSCLAT 366
            +FD I+ +   ++ISW ++++ +V+  +   A++ F E   +          D   +  
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++  C+    L    ++H +AI++G  +D  +  AL+D YAK G +K A  + +    K 
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324

Query: 427 TAEFNAILSGFM-----------------EKIADD----------------EEDVMVLFS 453
              +NA+++G+                  E I  D                 ++ +  F 
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK------------TGYAADVIV 501
           Q  L G EP+ VT   LLS  AS   L +G   HAYS+K             G   D++V
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444

Query: 502 GNALITMYAKCGSIDGAFQIFKGIS--DRDIVSWNAMLSAYALHGLGKGALLLFEEM--K 557
            NALI MY+KC S   A  IF  I   +R++V+W  M+  YA +G    AL LF EM  K
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA-CMVDLLGRAGR 616
               AP+  +I  +L AC +      G  +   + + +     +   A C++D+  + G 
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK--FSILASKRLLDLEPKDAGSFILVS 674
           +  A N+ +S P   + + W +++S   +    K    I    +     P D  SF+++ 
Sbjct: 565 VDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI-SFLVLL 622

Query: 675 NMYAGQGMLDE 685
              +  GM+D+
Sbjct: 623 YACSHSGMVDQ 633



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/552 (23%), Positives = 254/552 (46%), Gaps = 73/552 (13%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML---VRSAITWTSLIKG 133
           G A H  +  +G +++ F  N L+ +Y++   L+ A  +FD +    +   I+W S++  
Sbjct: 168 GSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAA 227

Query: 134 YLDDGDYESVLGIACDMYR--SEEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIK 187
           ++   +  + L +  +M     E+  NE +  +    IL AC+ L+     ++IH++AI+
Sbjct: 228 HVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIR 287

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
           +G   + FV  +LI  Y   G  ++A NVF  + +KDV   N M+  Y ++G+   AF +
Sbjct: 288 NGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFEL 347

Query: 248 FVHLLSSDF-----------------------------------EPNDYTFTNVISVCYE 272
           F ++   +                                    EPN  T  +++S C  
Sbjct: 348 FKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACAS 407

Query: 273 NLGVEEGKQLHGLAVKFGVVR------------EISVGNAIVTMYGKHGMSEEAERMFDA 320
              + +G + H  ++K  ++             ++ V NA++ MY K    + A  +F++
Sbjct: 408 LGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNS 467

Query: 321 IS--ERNLISWTALISGYVRSGHGGKAINGFLEFLD--LGICCDSSCLATVIDGCSVCSN 376
           I   ERN+++WT +I GY + G    A+  F E +     +  ++  ++ ++  C+  S+
Sbjct: 468 IPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSS 527

Query: 377 LELGLQLHGFAIKHG-YLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           L +G Q+H +  +H  Y S V  +   L+D+Y+K GD+ +AR + D    +    + +++
Sbjct: 528 LRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMM 587

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT- 493
           SG+   +    ++ + +F + + AG  PD ++F  LL   +    + +G  L  + I   
Sbjct: 588 SGY--GMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG--LDYFDIMRS 643

Query: 494 --GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LGK 547
             G  A       +I + A+ G +D A++  + +  +     W A+LSA  +H    L +
Sbjct: 644 DYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAE 703

Query: 548 GALLLFEEMKRE 559
            AL     MK E
Sbjct: 704 YALNKLVSMKAE 715



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 173/401 (43%), Gaps = 28/401 (6%)

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV---------------- 291
           F+ + S++    D + T+  S+  E   V   +Q+H   + +G+                
Sbjct: 16  FLSVASAECTGRDVSPTHFASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLP 75

Query: 292 ----VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
               V   S+G  +V  Y   G + +A  + + +     + W  L+  ++  G   +AI 
Sbjct: 76  SHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIG 135

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
                L  G   D   L   +  C    +   G   HG    +G+ S+V +  ALV +Y+
Sbjct: 136 VSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYS 195

Query: 408 KGGDLKSARMLLDGFSCKYTAE---FNAILSGFME----KIADDEEDVMVLFSQQRLAGM 460
           + G L+ A ++ D  + K   +   +N+I++  ++    + A D    M     ++    
Sbjct: 196 RSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNE 255

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
             D ++   +L   AS   L + + +H+Y+I+ G  AD  V NALI  YAKCGS+  A  
Sbjct: 256 RSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVN 315

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F  +  +D+VSWNAM++ Y   G    A  LF+ M++E    D I+   V+      G 
Sbjct: 316 VFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGY 375

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            +  +  F ++  +YG  P       ++      G LS+ M
Sbjct: 376 GQEALDTFQQM-ILYGSEPNSVTIISLLSACASLGALSQGM 415



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 61/440 (13%)

Query: 35  NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKL---GQAVHAFLLKSGSQN 91
           NP++ +     ++++   + T   +D   +V I      LK     + +H++ +++G+  
Sbjct: 233 NPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFA 292

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA--------------------------- 124
           D F  N LI+ YAK   +  A  +F+ M  +                             
Sbjct: 293 DAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMR 352

Query: 125 --------ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
                   ITW+++I GY   G  +  L     M     + N  T   +L AC+ L    
Sbjct: 353 KENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALS 412

Query: 177 FGEQIHAFAIKSGF------------ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
            G + HA+++K                 ++ V  +LI MY     F+ A  +F  +  ++
Sbjct: 413 QGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRE 472

Query: 225 VRCVNF--MILEYNKAGESEMAFHVFVHLLSSDF--EPNDYTFTNVISVCYENLGVEEGK 280
              V +  MI  Y + G+S  A  +F  ++S  +   PN YT + ++  C     +  GK
Sbjct: 473 RNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGK 532

Query: 281 QLHGLAVKFGVVRE--ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           Q+H    +          V N ++ MY K G  + A  +FD++ +RN +SWT+++SGY  
Sbjct: 533 QIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGM 592

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI---KHGYLSD 395
            G G +A++ F +    G   D      ++  CS    ++ GL    F I    +G ++ 
Sbjct: 593 HGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDY--FDIMRSDYGVIAS 650

Query: 396 VRLGTALVDIYAKGGDLKSA 415
            +    ++D+ A+ G L  A
Sbjct: 651 AQHYACVIDLLARSGRLDKA 670



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 26/313 (8%)

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
           H Y+S   LGT +V  Y   G    A  +L+         +N ++   +E   +   D  
Sbjct: 77  HSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIE---EGRLDRA 133

Query: 450 VLFSQQRL-AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
           +  S + L AG +PD  T    L           G + H      G+ ++V V NAL+ M
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAM 193

Query: 509 YAKCGSIDGAFQIFKGISDR---DIVSWNAMLSAYALHGLGKGALLLFEEM------KRE 559
           Y++ GS++ A  +F  I+ +   D++SWN++++A+      + AL LF EM      K  
Sbjct: 194 YSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKAT 253

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR--PILEHFAC--MVDLLGRAG 615
               D ISI+ +L AC     S   +    EI   Y +R     + F C  ++D   + G
Sbjct: 254 NERSDIISIVNILPACA----SLKALPQTKEIHS-YAIRNGTFADAFVCNALIDTYAKCG 308

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
            + +A+N+ N   F +  + W  +V+         + F +  + R  ++ P D  ++  V
Sbjct: 309 SMKDAVNVFNVMEFKDV-VSWNAMVTGYTQSGKFGAAFELFKNMRKENI-PLDVITWSAV 366

Query: 674 SNMYAGQGMLDEA 686
              YA +G   EA
Sbjct: 367 IAGYAQRGYGQEA 379


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 196/704 (27%), Positives = 351/704 (49%), Gaps = 74/704 (10%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLY--AKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +LK    + + ++ +G  +DTF A+ L+     + F  LD + ++FD +   +   W ++
Sbjct: 53  NLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTM 112

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           ++ Y+     E  L +   M ++    + +T  ++++AC++      G++IH   +K GF
Sbjct: 113 MRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGF 172

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           +++V+V  +LI+MY   G  R+A  +F      D    N ++  Y K G+ E A  +F  
Sbjct: 173 DSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIF-- 230

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
               D  P                                  R I   N+++ + GK G 
Sbjct: 231 ----DQMPQ---------------------------------RNIVASNSMIVLLGKMGQ 253

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             EA ++F+ + E++++SW+ALISGY ++G   +A+  F+E    G+  D   + +V+  
Sbjct: 254 VMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSA 313

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA----------------------- 407
           C+  S ++ G  +HG  I+ G  S V L  AL+ +Y+                       
Sbjct: 314 CAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISW 373

Query: 408 --------KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
                   K G ++ AR L D    K    ++A++SG+ +   D   + + LF + +L  
Sbjct: 374 NSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQH--DCFSETLALFHEMQLGQ 431

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           + PD      ++S     A L +G+ +HAY  K G   +VI+G  L+ MY KCG ++ A 
Sbjct: 432 IRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENAL 491

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           ++F G+ ++ + SWNA++   A++GL + +L +F EMK  G  P++I+ +GVL AC + G
Sbjct: 492 EVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG 551

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           L + G C F  + + +G+ P ++H+ CMVDLLGRAG L+EA  LI S P +     W  L
Sbjct: 552 LVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGAL 611

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           +   K   +++      ++L++L+P   G  +L+SN++A +G  ++  +VR  M    + 
Sbjct: 612 LGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVV 671

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK 743
           K  GCS IE +  +H F+A  K HP   ++   L+ +   +K++
Sbjct: 672 KTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKME 715



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 192/452 (42%), Gaps = 39/452 (8%)

Query: 57  LFNDWPQLVKISIGS---GDLKLGQAVHAFLL-KSGSQNDTFEANNLINLYAKFNRLDVA 112
           LF++ P L  +S  S   G +K G    A L+     Q +   +N++I L  K  ++  A
Sbjct: 198 LFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEA 257

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL 172
            KLF+ M  +  ++W++LI GY  +G YE  L +  +M  +  + +E     +L AC+ L
Sbjct: 258 WKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHL 317

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
                G+ IH   I+ G E+ V +  +LI MY  SG   +A+ +F G    D    N MI
Sbjct: 318 SIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMI 377

Query: 233 LEYNKAGESEMAFHVFVHLLSSD-------------------------------FEPNDY 261
               K G  E A  +F  +   D                                 P++ 
Sbjct: 378 SGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDET 437

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
              +VIS C     +++GK +H    K G+   + +G  ++ MY K G  E A  +F+ +
Sbjct: 438 ILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGM 497

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG- 380
            E+ + SW ALI G   +G   ++++ F E  + G+  +      V+  C     ++ G 
Sbjct: 498 EEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGR 557

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
                   KHG   +V+    +VD+  + G L  A  L++             L G  +K
Sbjct: 558 CHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKK 617

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             D E    V    ++L  ++PD   F  LLS
Sbjct: 618 HGDTEMGERV---GRKLIELQPDHDGFHVLLS 646


>gi|357450559|ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484604|gb|AES65807.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 1040

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 207/714 (28%), Positives = 368/714 (51%), Gaps = 23/714 (3%)

Query: 46  ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK 105
           I+++   + T  FN    ++ +      L   Q +HA     G   ++  ++ LI+ Y+ 
Sbjct: 9   ITNIKPFQTTRFFNTTSSILNLCTKPQYL---QQIHARFFLHGLHQNSSLSSKLIDSYSN 65

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
           F  L  + K+F       +I + + ++     G+YE  L +  +M +     +E  C  +
Sbjct: 66  FGLLHFSHKIFSFTENPDSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSV 125

Query: 166 LEAC-SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY-FHSGCFREAENVFRGLA-Y 222
           L++   +  ++      H   +K G +    VG +LI +Y F +G          GL   
Sbjct: 126 LKSLFYVFHEKGLIMMAHGHVVKLGMDAFDLVGNTLIELYGFLNG---------NGLVER 176

Query: 223 KDVRCVNF---MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           K V  +NF   +I E  ++G+   +F +F  + + + +PN  T  N++    E+  ++ G
Sbjct: 177 KSVTKLNFWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIG 236

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           K LH L V   + +E++V  A+++MY K    ++A  MF+ + E++++ W  +IS Y  S
Sbjct: 237 KVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGS 296

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G   +++      +  GI  D       I   +   ++E G QLH   I++G    V + 
Sbjct: 297 GCPKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVH 356

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            +LVD+Y+   DL SAR +      +    ++A++ G+   + D+  + + LF + +L+G
Sbjct: 357 NSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGY--AMHDNCLEALSLFIEMKLSG 414

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
            + D V    +L   A    L     LH YS+KT   +   +  +L+  YAKCG I+ A 
Sbjct: 415 TKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMAR 474

Query: 520 QIF--KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           ++F  +  S +DIV+WN+M++AY+ HG       L+ ++K     PD ++ LG+L AC+ 
Sbjct: 475 KLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVN 534

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           SGL + G  +F E+  IYG +P  EH ACMVDLLGRAG++ EA  +I ++  +    ++ 
Sbjct: 535 SGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIETNQLNSDARVYG 594

Query: 638 TLVSVSKLMA-NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
            L+S  K+    + F+ LA+++L+ +EP++  +++L+SN++A  G  D+ AK+R+ + D 
Sbjct: 595 PLLSACKMHGLETDFAELAAEKLIKMEPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDR 654

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAF 750
            L K  GCSW+ +D + H F  +   HP SE+IYS L +L  E  ++  D   F
Sbjct: 655 GLKKTPGCSWVVLDGQFHEFRVADHSHPRSEDIYSVLKVLELEAGMEDDDLEFF 708


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 199/693 (28%), Positives = 357/693 (51%), Gaps = 16/693 (2%)

Query: 74  LKLGQAVHAF-----LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           L  G+ VH       LL+    +++   N +I +Y +    D+A  +FD M  ++ + WT
Sbjct: 26  LPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRMKDQNVVAWT 85

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI-FGEQIHAFAIK 187
           SLI  +   G +   + +   M  S    +  T + IL   S  E  +  G+++H+  ++
Sbjct: 86  SLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQ 145

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
           +G+E +  V   ++ MY   G   +A NVF  +   +V     +I  Y + G       +
Sbjct: 146 TGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRL 205

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-FGVVREISVGNAIVTMYG 306
              +  +  +P+ YTFT V+  C     +EE K LH   +   G+ R+ +VG A++ +YG
Sbjct: 206 LSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYG 265

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLA 365
           K G  EEA  +F  I  ++++SW+++I+ + +SG    AI   L  +DL G+  ++    
Sbjct: 266 KCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQ-LLMLMDLEGVRPNNVTFV 324

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            V++  +     + G ++H   ++ GY  DV L +ALV +Y   G +++AR + +    +
Sbjct: 325 NVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRER 384

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               ++++++G+ +   +     + LF +  + G++P+ VTF   +   A    L RG  
Sbjct: 385 DVVSWSSMIAGYSQN--ESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQ 442

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           LH      G   DV V  AL+ +Y KCG ++ A  +F G+  +++++W ++  AY  +G 
Sbjct: 443 LHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGH 502

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G  +L L   M+ +G  PD I  + +L +C Y+G    G+  +N + Q +G+ P +EH  
Sbjct: 503 GSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCG 562

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           CMVD+LGRAG+L  A  LIN+  F ES L W  L++  K   ++  +  A++++  LEPK
Sbjct: 563 CMVDILGRAGKLEAAEQLINTMKF-ESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPK 621

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           +A  ++L+S+++   G  + A + R  M+   + +  G S IEI  ++H FVA+    P 
Sbjct: 622 NATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPH 681

Query: 726 S--EEIYSKLDLLNDEMKLK--VKDSSAFELQD 754
               EI++ L+ L  EM+    V D++A  L+D
Sbjct: 682 HLVGEIFAALEKLGREMQGAGYVPDATAVRLRD 714



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 250/530 (47%), Gaps = 16/530 (3%)

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL-----ISMYFHSGCFREAENV 216
           C+ IL ACS L     G+++H   ++     +     SL     I MY   GC   A +V
Sbjct: 13  CAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDV 72

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV-ISVCYENLG 275
           F  +  ++V     +I  +  AG    A  +F  +L S   P+  TFT++ +        
Sbjct: 73  FDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERN 132

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           ++EGK++H   ++ G   +  V N +V MYGK G  E+A  +FD+I + N+ SWT +I+ 
Sbjct: 133 LDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAA 192

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH-GYLS 394
           Y ++GH  + +         G+  D     TV+  C+    LE    LH   I   G   
Sbjct: 193 YAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDR 252

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           D  +GTAL+++Y K G L+ A  +      K    ++++++ F +  +   +  + L   
Sbjct: 253 DAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQ--SGQAKSAIQLLML 310

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
             L G+ P+ VTF  +L    S      G+ +HA  ++ GY+ DV + +AL+ MY   G 
Sbjct: 311 MDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGW 370

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           ++ A  IF+   +RD+VSW++M++ Y+ +     AL LF EM+ +G  P+ ++ +  + A
Sbjct: 371 VETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDA 430

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C   G    G  L   + +  GL   +     +V+L G+ GRL EA  +       ++ L
Sbjct: 431 CAGVGALRRGTQLHERV-RCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMK-KKNLL 488

Query: 635 LWRTLVSV--SKLMANSKFSILASKRLLDLEPKDAGSF--ILVSNMYAGQ 680
            W ++          +    +L    L  ++P D   F  ILVS  YAGQ
Sbjct: 489 TWTSIAMAYGQNGHGSRSLKLLHGMELQGMKP-DGIVFVAILVSCNYAGQ 537



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 234/484 (48%), Gaps = 8/484 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+K S    +L  G+ VH+ ++++G + D    N ++ +Y K   ++ A  +FD +   +
Sbjct: 123 LLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPN 182

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +WT +I  Y  +G    VL +   M ++  K + +T + +L AC+ +      + +HA
Sbjct: 183 VFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHA 242

Query: 184 FAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             I S G + +  VGT+LI++Y   G   EA  VF  +  KD+   + MI  + ++G+++
Sbjct: 243 ATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAK 302

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  + + +      PN+ TF NV+         + GK++H   V+ G   ++ + +A+V
Sbjct: 303 SAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALV 362

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY   G  E A  +F++  ER+++SW+++I+GY ++    +A++ F E    G+  +S 
Sbjct: 363 KMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSV 422

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
              + ID C+    L  G QLH      G   DV + TALV++Y K G L+ A  +  G 
Sbjct: 423 TFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGM 482

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    + +I   + +         + L     L GM+PD + F  +L        + +
Sbjct: 483 KKKNLLTWTSIAMAYGQNGHGSRS--LKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSK 540

Query: 483 GRSLHAYSIKT---GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           G  LH Y++ T   G A  V     ++ +  + G ++ A Q+   +     ++W  +L+A
Sbjct: 541 G--LHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTA 598

Query: 540 YALH 543
              H
Sbjct: 599 CKAH 602



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 127/269 (47%), Gaps = 9/269 (3%)

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR-----LGTALVDIYAKGGDLKSA 415
           S+C A ++  CS    L  G ++HG  ++   L D R     L   ++ +Y + G    A
Sbjct: 11  SAC-AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLA 69

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF-SRLLSLS 474
             + D    +    + +++S F    A    D MVLF +  L+G+ PD +TF S LL  S
Sbjct: 70  LDVFDRMKDQNVVAWTSLISAF--TFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWS 127

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
             +  L  G+ +H++ ++TGY  D +V N ++ MY KCG ++ A  +F  I D ++ SW 
Sbjct: 128 GRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWT 187

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
            +++AYA +G     L L   M + G  PD  +   VL AC   G  E    L       
Sbjct: 188 IIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISS 247

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNL 623
            GL         +++L G+ G L EA  +
Sbjct: 248 TGLDRDAAVGTALINLYGKCGALEEAFGV 276


>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
          Length = 700

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 200/643 (31%), Positives = 337/643 (52%), Gaps = 17/643 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D +  + +HA +L  G  + T     L+  YAK   +  A ++FDGM  R++  W ++IK
Sbjct: 63  DFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIK 122

Query: 133 GYLDDGDYESVL----GIACDMYRSEEKFNEHTCSVILEACSLL----EDRIFGEQIHAF 184
           G +D G +   L    G+  D   + + F   T   +++AC+ L    + R   E + A 
Sbjct: 123 GLVDAGRFSEALEMFWGMVNDGSVAVDGF---TYPPVIKACAALGAVAQGRKVWEMVEAD 179

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
                   NVFV  +L+ M+   GC  EA NVF  +  +D+     MI     +G     
Sbjct: 180 IASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEV 239

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             +F H+ S  F  +      VIS C     ++ G  LHG AVK G   +I V NA+V M
Sbjct: 240 VDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDM 299

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  E A+ +F + + ++++SW++LI GY ++G    +++ F E + LGI  +SS L
Sbjct: 300 YCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTL 359

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           A+++   SV   +  G ++H F+I+HG      + +AL+D+Y+K G ++ A  +      
Sbjct: 360 ASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLD 419

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K  A +N++++G+      D     +   Q+   G++PD VT   +L L      L++G+
Sbjct: 420 KDLAIWNSMVAGYAVNGYSDSAFCALRLLQK--VGLKPDHVTVVSVLPLCNQHHMLIQGK 477

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            LHAY IK    +   V NAL+ MY KCG ++ A ++F+ +++R+ V++N ++S++  H 
Sbjct: 478 ELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHN 537

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
               AL  F+ MKR+G APD ++ + +L  C ++GL + G+ L++ +   Y + P  EH+
Sbjct: 538 HEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY 597

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLL--WRTLVSVSKLMANSKFSILASKRLLDL 662
           +C+VDL  R G+L EA   +  S  +E P +     L++  ++      + L  KR+ + 
Sbjct: 598 SCIVDLYSRCGKLDEAWCFM--SNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQ 655

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
            P D G  IL+SN+YA  GM  +  ++RT + +  L KE G S
Sbjct: 656 NPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNS 698



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 19/355 (5%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G+L++G A+H   +KSG+  D + +N L+++Y K   +++A  LF     +  ++W+SL
Sbjct: 268 AGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSL 327

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY  +G +   + + C+M       N  T + IL   S+L+    G++IH F+I+ G 
Sbjct: 328 IVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGL 387

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E + FV ++LI +Y   G  R AE +F     KD+   N M+  Y   G S+ AF     
Sbjct: 388 ERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRL 447

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L     +P+  T  +V+ +C ++  + +GK+LH   +K+ +    SV NA++ MY K G 
Sbjct: 448 LQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGF 507

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL----GICCDSSCLAT 366
            E A+ +F  ++ERN +++  LIS + +  H  +A    L F DL    GI  D      
Sbjct: 508 LEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQA----LSFFDLMKRDGIAPDKVTFVA 563

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG------TALVDIYAKGGDLKSA 415
           ++  CS    ++ GL L+     H  L D  +       + +VD+Y++ G L  A
Sbjct: 564 LLSCCSHAGLIDKGLHLY-----HSMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 613


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 202/662 (30%), Positives = 329/662 (49%), Gaps = 5/662 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
            HA L+++G Q+D      L            A+ LF  +       +  LIKG+    D
Sbjct: 27  THAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPD 86

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
             S+      +  +    +  T +  + A     D   G  +HA A+  GF++N+FV ++
Sbjct: 87  ASSISFYTHLLKNTTLSPDNFTYAFAISASP---DDNLGMCLHAHAVVDGFDSNLFVASA 143

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ +Y        A  VF  +  +D    N MI    +    + +  VF  +++     +
Sbjct: 144 LVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T   V+    E   V+ G  +  LA+K G   +  V   +++++ K    + A  +F 
Sbjct: 204 STTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFG 263

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            I + +L+S+ ALISG+  +G    A+  F E L  G    SS +  +I   S   +L L
Sbjct: 264 MIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHL 323

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
              + GF +K G +    + TAL  IY++  ++  AR L D  S K  A +NA++SG+ +
Sbjct: 324 ACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQ 383

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
             +   E  + LF +       P+PVT + +LS  A    L  G+S+H          ++
Sbjct: 384 --SGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNI 441

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            V  ALI MYAKCG+I  A Q+F   S+++ V+WN M+  Y LHG G  AL LF EM   
Sbjct: 442 YVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHL 501

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
           GF P  ++ L VL AC ++GL   G  +F+ +   Y + P+ EH+ACMVD+LGRAG+L +
Sbjct: 502 GFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEK 561

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
           A+  I   P    P +W TL+    +  ++  + +AS+RL +L+P + G ++L+SN+Y+ 
Sbjct: 562 ALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSV 621

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE 739
           +    +AA VR  +    LSK  GC+ IE++   H FV   + H ++  IY+KL+ L  +
Sbjct: 622 ERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGK 681

Query: 740 MK 741
           M+
Sbjct: 682 MR 683



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 225/477 (47%), Gaps = 6/477 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
            S D  LG  +HA  +  G  ++ F A+ L++LY KF+R+  A+K+FD M  R  + W +
Sbjct: 115 ASPDDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNT 174

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G + +  Y+  + +  DM     + +  T + +L A + +++   G  I   A+K G
Sbjct: 175 MITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLG 234

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F  + +V T LIS++        A  +F  +   D+   N +I  ++  GE+E A   F 
Sbjct: 235 FHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFR 294

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            LL S    +  T   +I V      +     + G  VK G + + SV  A+ T+Y +  
Sbjct: 295 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLN 354

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             + A ++FD  SE+ + +W A+ISGY +SG    AI+ F E +      +   + +++ 
Sbjct: 355 EIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILS 414

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+    L  G  +H          ++ + TAL+D+YAK G++  A  L D  S K T  
Sbjct: 415 ACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVT 474

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N ++ G+      DE   + LF++    G +P  VTF  +L  + S A LVR      +
Sbjct: 475 WNTMIFGYGLHGYGDE--ALKLFNEMLHLGFQPSSVTFLSVL-YACSHAGLVREGDEIFH 531

Query: 490 SIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           ++   Y  + +  +   ++ +  + G ++ A +  + +  +     W  +L A  +H
Sbjct: 532 AMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIH 588



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 231/466 (49%), Gaps = 17/466 (3%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           + HA  I++G+++++   T L    F  G  R A  +F  +   D+   N +I  ++ + 
Sbjct: 26  ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP 85

Query: 240 ESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCY-ENLGVEEGKQLHGLAVKFGVVREISV 297
           ++  +   + HLL ++   P+++T+   IS    +NLG+     LH  AV  G    + V
Sbjct: 86  DAS-SISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGM----CLHAHAVVDGFDSNLFV 140

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            +A+V +Y K      A ++FD + +R+ + W  +I+G VR+     ++  F + +  G+
Sbjct: 141 ASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGV 200

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             DS+ +ATV+   +    +++G+ +   A+K G+  D  + T L+ +++K  D+ +AR+
Sbjct: 201 RLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARL 260

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L           +NA++SGF      + E  +  F +  ++G      T   L+ +S+  
Sbjct: 261 LFGMIRKPDLVSYNALISGF--SCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPF 318

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L     +  + +K+G      V  AL T+Y++   ID A Q+F   S++ + +WNAM+
Sbjct: 319 GHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMI 378

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           S YA  GL + A+ LF+EM    F P+ ++I  +L AC       G +     + Q+   
Sbjct: 379 SGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACA----QLGALSFGKSVHQLIKS 434

Query: 598 RPILEHF---ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           + + ++      ++D+  + G +SEA  L + +   ++ + W T++
Sbjct: 435 KNLEQNIYVSTALIDMYAKCGNISEASQLFDLTS-EKNTVTWNTMI 479



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 1/252 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +S   G L L   +  F +KSG+      +  L  +Y++ N +D+A++LFD    ++
Sbjct: 311 LIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKT 370

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
              W ++I GY   G  E  + +  +M  +E   N  T + IL AC+ L    FG+ +H 
Sbjct: 371 VAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQ 430

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
                  E N++V T+LI MY   G   EA  +F   + K+    N MI  Y   G  + 
Sbjct: 431 LIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDE 490

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIV 302
           A  +F  +L   F+P+  TF +V+  C     V EG ++ H +  K+ +         +V
Sbjct: 491 ALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMV 550

Query: 303 TMYGKHGMSEEA 314
            + G+ G  E+A
Sbjct: 551 DILGRAGQLEKA 562


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 169/496 (34%), Positives = 280/496 (56%), Gaps = 8/496 (1%)

Query: 252 LSSDFEPNDYTFTN-VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L   + P D  F N ++  C     + +G+ +H   ++     +I +GN ++ MY K G 
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            EEA ++F+ + +R+ ++WT LISGY +      A+  F + L  G   +   L++VI  
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            +       G QLHGF +K G+ S+V +G+AL+D+Y + G +  A+++ D    +    +
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NA+++G   +     E  + LF      G  P   +++ L    +S   L +G+ +HAY 
Sbjct: 231 NALIAGHARR--SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK+G       GN L+ MYAK GSI  A +IF  ++ RD+VSWN++L+AYA HG GK A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
             FEEM+R G  P++IS L VL AC +SGL + G   + E+ +  G+ P   H+  +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDL 407

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGRAG L+ A+  I   P   +  +W+ L++  ++  N++    A++ + +L+P D G  
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           +++ N+YA  G  ++AA+VR  M +  + KE  CSW+EI++ +H FVA+ + HP+ EEI 
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527

Query: 731 SKLDLLNDEMKLKVKD 746
            K     +E+  K+K+
Sbjct: 528 RKW----EEVLAKIKE 539



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 192/387 (49%), Gaps = 3/387 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VHA +L+S  ++D    N L+N+YAK   L+ A+K+F+ M  R  +TWT+LI GY  
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
                  L     M R     NE T S +++A +       G Q+H F +K GF++NV V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G++L+ +Y   G   +A+ VF  L  ++    N +I  + +   +E A  +F  +L   F
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ +++ ++   C     +E+GK +H   +K G       GN ++ MY K G   +A +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD +++R+++SW +L++ Y + G G +A+  F E   +GI  +     +V+  CS    
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L+ G   +    K G + +      +VD+  + GDL  A   ++    + TA   AI   
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTA---AIWKA 435

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPD 463
            +      +   +  ++ + +  ++PD
Sbjct: 436 LLNACRMHKNTELGAYAAEHVFELDPD 462



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 183/382 (47%), Gaps = 3/382 (0%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           + +L+ C++ +  I G  +HA  ++S F +++ +G +L++MY   G   EA  VF  +  
Sbjct: 64  NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           +D      +I  Y++      A   F  +L   + PN++T ++VI           G QL
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           HG  VK G    + VG+A++ +Y ++G+ ++A+ +FDA+  RN +SW ALI+G+ R    
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            KA+  F   L  G        A++   CS    LE G  +H + IK G       G  L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+YAK G +  AR + D  + +    +N++L+ + +     E   +  F + R  G+ P
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE--AVWWFEEMRRVGIRP 361

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           + ++F  +L+  +    L  G   +    K G   +      ++ +  + G ++ A +  
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421

Query: 523 KGISDRDIVS-WNAMLSAYALH 543
           + +      + W A+L+A  +H
Sbjct: 422 EEMPIEPTAAIWKALLNACRMH 443



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+ G+ VHA+++KSG +   F  N L+++YAK   +  A+K+FD +  R  ++W SL
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           +  Y   G  +  +    +M R   + NE +   +L ACS
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 190/681 (27%), Positives = 339/681 (49%), Gaps = 64/681 (9%)

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           A+ W  L++ ++ +G  +  +G++C M R+  K +  T    L+AC  L     G  +H 
Sbjct: 114 AVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHG 173

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK---DVRCVNFMILEYNKAGE 240
               +GFE+NVFV  +L++MY   G   +A  VF  +  K   DV   N ++  + K   
Sbjct: 174 LICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSN 233

Query: 241 SEMAFHVF------VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
              A  +F      VH  +++   +  +  N++  C     + + K++H  A++ G   +
Sbjct: 234 PRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFAD 293

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG----------- 343
             V NA++  Y K G   +A ++F+ +  ++++SW A+++GY +SG+ G           
Sbjct: 294 AFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRK 353

Query: 344 ------------------------KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
                                   +A++ F + +  G   +S  + +++  C+    L  
Sbjct: 354 ENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQ 413

Query: 380 GLQLHGFAIKHGYLS------------DVRLGTALVDIYAKGGDLKSARMLLDGFSCK-- 425
           G+++H +++K   LS            D+ +  AL+D+Y+K    K+AR + D    +  
Sbjct: 414 GMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRER 473

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVRG 483
               +  ++ G+ +    D  D + +FS+   +   + P+  T S +L   A  A L  G
Sbjct: 474 NVVTWTVMIGGYAQY--GDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMG 531

Query: 484 RSLHAYSIKTG-YAADV-IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
           + +HAY  +   Y   V  V N LI MY+KCG +D A  +F  +  R+ VSW +M+S Y 
Sbjct: 532 KQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG 591

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
           +HG GK AL +F++M++ GF PDDIS L +L AC +SG+ + G+  F+ + + Y +    
Sbjct: 592 MHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASA 651

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           EH+AC++DLL R GRL +A   I   P   S ++W  L+S  ++ +N + +  A  +L++
Sbjct: 652 EHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVN 711

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           ++ ++ GS+ L+SN+YA      + A++R  M    + K  GCSW++       F    +
Sbjct: 712 MKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDR 771

Query: 722 DHPESEEIYSKLDLLNDEMKL 742
            HP S EIYS L+ L   +K+
Sbjct: 772 SHPLSPEIYSLLERLIGRIKV 792



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 249/551 (45%), Gaps = 63/551 (11%)

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +GT +++ Y   G  ++A +V   +        N ++ E+ K G  + A  V   +L + 
Sbjct: 85  LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P+ +T    +  C E      G+ LHGL    G    + V NA+V MY + G  E+A 
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204

Query: 316 RMFDAISER---NLISWTALISGYVRSGHGGKAINGFLE---FLDLGICCDSSCLATVID 369
            +FD I+ +   ++ISW ++++ +V+  +   A+  F E    +      + S + ++++
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264

Query: 370 GCSVCSNLELGLQ---LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
               C++L+   Q   +H +AI++G  +D  +  AL+D YAK G +  A  + +    K 
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324

Query: 427 TAEFNAILSGFM-----------------EKIADD----------------EEDVMVLFS 453
              +NA+++G+                  E I  D                 ++ +  F 
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK------------TGYAADVIV 501
           Q  L G EP+ VT   LLS  AS   L +G  +HAYS+K             G   D++V
Sbjct: 385 QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMV 444

Query: 502 GNALITMYAKCGSIDGAFQIFKGIS--DRDIVSWNAMLSAYALHGLGKGALLLFEEM--K 557
            NALI MY+KC S   A  IF  I   +R++V+W  M+  YA +G    AL +F EM  K
Sbjct: 445 YNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISK 504

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA-CMVDLLGRAGR 616
               AP+  +I  +L AC +      G  +   + + +   P +   A C++D+  + G 
Sbjct: 505 PYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGD 564

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK--FSILASKRLLDLEPKDAGSFILVS 674
           +  A N+ +S P   + + W +++S   +    K    I    +     P D  SF+++ 
Sbjct: 565 VDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI-SFLVLL 622

Query: 675 NMYAGQGMLDE 685
              +  GM+D+
Sbjct: 623 YACSHSGMVDQ 633



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 258/554 (46%), Gaps = 77/554 (13%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML---VRSAITWTSLIKG 133
           G+A+H  +  +G +++ F  N L+ +Y++   L+ A  +FD +    +   I+W S++  
Sbjct: 168 GRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAA 227

Query: 134 YLDDGDYESVLGIACDMYR--SEEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIK 187
           ++   +  + L +  +M     E+  NE +  +    IL AC+ L+     ++IH++AI+
Sbjct: 228 HVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIR 287

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
           +G   + FV  +LI  Y   G   +A  VF  + +KDV   N M+  Y ++G    AF +
Sbjct: 288 NGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFEL 347

Query: 248 FVHLLSSDF-----------------------------------EPNDYTFTNVISVCYE 272
           F ++   +                                    EPN  T  +++S C  
Sbjct: 348 FENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACAS 407

Query: 273 NLGVEEGKQLHGLAVKFGVVR------------EISVGNAIVTMYGKHGMSEEAERMFDA 320
              + +G ++H  ++K  ++             ++ V NA++ MY K    + A  +FD+
Sbjct: 408 LGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDS 467

Query: 321 IS--ERNLISWTALISGYVRSGHGGKAINGFLEFLD--LGICCDSSCLATVIDGCSVCSN 376
           I   ERN+++WT +I GY + G    A+  F E +     +  ++  ++ ++  C+  + 
Sbjct: 468 IPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAA 527

Query: 377 LELGLQLHGFAIKHG-YLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           L +G Q+H +  +H  Y   V  +   L+D+Y+K GD+ +AR + D    +    + +++
Sbjct: 528 LRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMM 587

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI-KT 493
           SG+   +    ++ + +F + + AG  PD ++F  LL   +    + +G  L+ + I + 
Sbjct: 588 SGY--GMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG--LNYFDIMRR 643

Query: 494 GYAADVIVG----NALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---L 545
            Y  DV+        +I + A+CG +D A++  + +  +   V W A+LSA  +H    L
Sbjct: 644 DY--DVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVEL 701

Query: 546 GKGALLLFEEMKRE 559
            + AL     MK E
Sbjct: 702 AEYALNKLVNMKAE 715



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 171/373 (45%), Gaps = 31/373 (8%)

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV---------------- 291
           F+ + S+D    D + T+  S+  E   V   +Q+H   +  G+                
Sbjct: 16  FLSVASADCFGRDVSPTHFASLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLP 75

Query: 292 ----VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
               V   S+G  +V  Y   G +++A  + + ++    + W  L+  +++ GH  +AI 
Sbjct: 76  SHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIG 135

Query: 348 GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
                L  G   D   L   +  C    +   G  LHG    +G+ S+V +  ALV +Y+
Sbjct: 136 VSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYS 195

Query: 408 KGGDLKSARMLLDGFSCKYTAE---FNAILSGFMEKIADDEEDVMVLFSQ------QRLA 458
           + G L+ A ++ D  + K   +   +N+I++  ++    +    + LFS+      ++  
Sbjct: 196 RCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVK--GSNPRTALELFSEMSMIVHEKAT 253

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
               D ++   +L   AS   L + + +H+Y+I+ G  AD  V NALI  YAKCGS++ A
Sbjct: 254 NERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDA 313

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F  +  +D+VSWNAM++ Y   G    A  LFE M++E    D I+   V+      
Sbjct: 314 VKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQR 373

Query: 579 GLSEGGICLFNEI 591
           G S+  +  F ++
Sbjct: 374 GCSQEALDAFQQM 386



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 189/438 (43%), Gaps = 57/438 (13%)

Query: 35  NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLK-LGQ--AVHAFLLKSGSQN 91
           NP++ +     +S +   + T   +D   +V I      LK L Q   +H++ +++G+  
Sbjct: 233 NPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFA 292

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D F  N LI+ YAK   ++ A K+F+ M  +  ++W +++ GY   G++ +   +  +M 
Sbjct: 293 DAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMR 352

Query: 152 R----------------------SEEKF-------------NEHTCSVILEACSLLEDRI 176
           +                      S+E               N  T   +L AC+ L    
Sbjct: 353 KENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALS 412

Query: 177 FGEQIHAFAIKSGF------------ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
            G +IHA+++K                 ++ V  +LI MY     F+ A ++F  +  ++
Sbjct: 413 QGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRE 472

Query: 225 VRCVNF--MILEYNKAGESEMAFHVFVHLLSSDF--EPNDYTFTNVISVCYENLGVEEGK 280
              V +  MI  Y + G+S  A  +F  ++S  +   PN YT + ++  C     +  GK
Sbjct: 473 RNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGK 532

Query: 281 QLHGLAVKFGVVRE--ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           Q+H    +          V N ++ MY K G  + A  +FD++ +RN +SWT+++SGY  
Sbjct: 533 QIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGM 592

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVR 397
            G G +A++ F +    G   D      ++  CS    ++ GL       + +  ++   
Sbjct: 593 HGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAE 652

Query: 398 LGTALVDIYAKGGDLKSA 415
               ++D+ A+ G L  A
Sbjct: 653 HYACVIDLLARCGRLDKA 670



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 20/284 (7%)

Query: 72  GDLKLGQAVHAFLLKS------------GSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           G L  G  +HA+ LK             G   D    N LI++Y+K      A+ +FD +
Sbjct: 409 GALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSI 468

Query: 120 LVR--SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDR 175
             R  + +TWT +I GY   GD    L I  +M         N +T S IL AC+ L   
Sbjct: 469 PRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAAL 528

Query: 176 IFGEQIHAFAIKSG-FENNV-FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
             G+QIHA+  +   +E +V FV   LI MY   G    A NVF  +  ++      M+ 
Sbjct: 529 RMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMS 588

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-FGVV 292
            Y   G  + A  +F  +  + F P+D +F  ++  C  +  V++G     +  + + VV
Sbjct: 589 GYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVV 648

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
                   ++ +  + G  ++A +    +  E + + W AL+S 
Sbjct: 649 ASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSA 692


>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 878

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 200/685 (29%), Positives = 354/685 (51%), Gaps = 9/685 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  +++   G GDL  G  VH  +LK+G + ++   ++L +LY+K  +L  A++LF  + 
Sbjct: 126 FSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQ 185

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               I+WT +I   +    +   L    +M ++    NE T   +L A S L    FG+ 
Sbjct: 186 NADTISWTMMISSLVGARKWSEALRFYSEMIKAGVPPNEFTFVKLLGASSFLGLE-FGKT 244

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH+  I  G   NV + TSL+  Y H     +A  V      +DV     ++  + +   
Sbjct: 245 IHSSIIVRGIPLNVVLKTSLVYFYSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLR 304

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           ++ A   F+ + S    PN++T++ ++S+C     ++ GKQ+H   +K G      VGNA
Sbjct: 305 AKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNA 364

Query: 301 IVTMYGKHGMSE-EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +V+MY K   SE EA R+F A+   N++SWT LI G V  G         +E +   +  
Sbjct: 365 LVSMYMKCSASEVEASRVFGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEP 424

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   L+ V+  CS    L L L++HG+ ++     ++ +G +LVD YA  G +  A  + 
Sbjct: 425 NFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVT 484

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                +    + ++++ F E      E  + + +     G+  D ++    +S SA+   
Sbjct: 485 RSMDMRDNITYTSLVTRFNE--LGKHEMALSVINHMYGDGIRMDQLSLPGFISASANLGA 542

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
              G+ LH YS+K+G++  V V N+L+ MY+KCGS++ A ++F+ I+  D+VSWN ++S 
Sbjct: 543 HETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVSG 602

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
            A  G    AL  FEEM+ +G  PD ++ L +L AC    L+E G+  F  ++ I+ + P
Sbjct: 603 LASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSKGRLTEMGLEYFQSMKTIHNMEP 662

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            +EH+  +V +LGRAGRL EA  ++ +     + ++++TL+   +   N       + + 
Sbjct: 663 QIEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYHGNLSLGEDMANKG 722

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           L L P D   +IL++++Y   G  + A K R  M++  L K+   S +E+  K+H FV  
Sbjct: 723 LALAPSDPAFYILLADLYDESGKPELAQKTRNLMSEKGLCKKLSKSTVEVQGKVHSFV-- 780

Query: 720 GKD---HPESEEIYSKLDLLNDEMK 741
           G+D     +++ IY++++ + +E+K
Sbjct: 781 GEDVITVEKTKRIYAEIESIKEEIK 805



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 291/620 (46%), Gaps = 22/620 (3%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S   ++G  +H  ++K G   +    NNL++LY K + +  A+KLFD M  R+   WT +
Sbjct: 35  SSSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTVM 94

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  +    ++ S L +  +M  S    NE T S ++ +C+ L D  +G ++H   +K+GF
Sbjct: 95  ISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGF 154

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E N  VG+SL  +Y   G  +EA  +F  L   D      MI     A +   A   +  
Sbjct: 155 EGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSE 214

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++ +   PN++TF  ++      LG+E GK +H   +  G+   + +  ++V  Y    +
Sbjct: 215 MIKAGVPPNEFTFVKLLGAS-SFLGLEFGKTIHSSIIVRGIPLNVVLKTSLVYFYSHFSI 273

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E+A R+ ++  E+++  WT+++SG+VR+    +A+  FLE   LG+  ++   + ++  
Sbjct: 274 MEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSL 333

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK--GGDLKSARMLLDGFSCKYTA 428
           CS   +L+LG Q+H   IK G+     +G ALV +Y K    +++++R+     S    +
Sbjct: 334 CSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMISPNVVS 393

Query: 429 EFNAILS----GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
               IL     GF       E+D   L  +     +EP+ VT S +L   +    L    
Sbjct: 394 WTTLILGLVDHGF-------EQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVL 446

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +H Y ++     ++IVGN+L+  YA  G +D A+ + + +  RD +++ ++++ +   G
Sbjct: 447 EIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNELG 506

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL--FNEIEQIYGLRPILE 602
             + AL +   M  +G   D +S+ G + A    G  E G  L  ++      G   +L 
Sbjct: 507 KHEMALSVINHMYGDGIRMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLN 566

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLL 660
               +VD+  + G L +A  +       +  + W  LVS   S    +S  S     R+ 
Sbjct: 567 ---SLVDMYSKCGSLEDAKKVFEEIAMPD-VVSWNGLVSGLASIGRISSALSAFEEMRMK 622

Query: 661 DLEPKDAGSFILVSNMYAGQ 680
             EP      IL+S    G+
Sbjct: 623 GTEPDSVTFLILLSACSKGR 642


>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 197/639 (30%), Positives = 330/639 (51%), Gaps = 3/639 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G  +LG  VH F LK G + + F  ++++N+YAK   ++ A+++F+ M       W ++I
Sbjct: 72  GGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMI 131

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY         L I   M       +  T    L+ C ++ +  FG QIH   I+S   
Sbjct: 132 GGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVG 191

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +  V  SL+ MYF +G    A  VF  L  KD+   N +    ++  ++      F  L
Sbjct: 192 FSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKL 251

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           + +  +PN  TF+ +   C E L +  G Q H LA +FG+  E SV ++++ M+ + G  
Sbjct: 252 MLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAM 311

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
             A  +FD+   +++ +   +ISGY  + H  +A+N F     LG+  D    ++ ++ C
Sbjct: 312 RMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEAC 371

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
               N +LG Q+HG  +K G+ S   + ++L+  Y   G L  +    +G        + 
Sbjct: 372 FRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWG 431

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A++S  + K    E   + L ++ + AG +PD   F  + +  A  A   + +S+H+  +
Sbjct: 432 AMISALVHKGYSSE--AIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVV 489

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGAL 550
           K GY A V V +A+I  YAKCG I+ A ++F   S  RD++ +N M+ AYA HGL + A+
Sbjct: 490 KMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAV 549

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
             FE+MK     P   + + V+ AC + GL E G   F  +   YG+ P  +++ C+VDL
Sbjct: 550 ETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDL 609

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
             R G L +A ++I + PF   P +WR+L++  ++  N +    A+K+LL L P++  ++
Sbjct: 610 FSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAY 669

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +L+S +Y+ +G   +AAKVR  M +  L K+ GCSWIEI
Sbjct: 670 VLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWIEI 708



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 153/607 (25%), Positives = 282/607 (46%), Gaps = 30/607 (4%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y K   L    K+F  M +++ ++WT ++ G + +G++E  LG+  +M R+    NE  
Sbjct: 1   MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
              + +AC+ L  +  G  +H FA+K G E N FVG+S+++MY   G   +AE VF  + 
Sbjct: 61  LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMD 120

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
              V C N MI  Y +      +  +   +       + +TF N +  C     +  G+Q
Sbjct: 121 NLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQ 180

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HGL ++  V    +V N+++ MY K+G    A ++FD + ++++ISW  + +G +  G 
Sbjct: 181 IHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAG-LSQGD 239

Query: 342 GGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
             + I  F   L L G+  +    + +   C    +L  GLQ H  A + G   +  + +
Sbjct: 240 DAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTS 299

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           +L++++++ G ++ A ++ D    K     N ++SG+     + E   + LF      G+
Sbjct: 300 SLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAE--ALNLFCNLNGLGL 357

Query: 461 EPDPVTFSRLLSLSASQACLVR-----GRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           E D  TFS     SA +AC        GR +H   +K+G+A+   V ++L+  Y   G +
Sbjct: 358 EADECTFS-----SALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLL 412

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           D +F+ F G+   D+VSW AM+SA    G    A+ L   +K  G  PD+     +   C
Sbjct: 413 DDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCC 472

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFA------CMVDLLGRAGRLSEAMNLINSSPF 629
                   GI  + + + ++ L   + + A       ++D   + G +  A  + + +  
Sbjct: 473 -------AGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSR 525

Query: 630 SESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
               +L+ T+V       +           +L  LEP  A +F+ V +  +  G++++  
Sbjct: 526 FRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQA-TFVSVISACSHLGLVEQGD 584

Query: 688 KVRTTMN 694
               +MN
Sbjct: 585 IFFKSMN 591


>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 198/683 (28%), Positives = 354/683 (51%), Gaps = 16/683 (2%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEA----NNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           + D+  G+A+H+  L+S S  +T  +    N+L+N+YA     + A  +FD M  R+ + 
Sbjct: 130 TKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMRRRNVVA 188

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W +LI  ++    Y   +    +M       +  T   +  A S L D    +  + F  
Sbjct: 189 WNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMR 248

Query: 187 KSG--FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           K G  + ++VFV +S I M+   GC   A  VF     K+    N MI+ Y +      A
Sbjct: 249 KFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEA 308

Query: 245 FHVFVHLLSSDFEP-NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
             VF+  L S+    +D T  +V++   +   ++  +Q H   +K      I + NA++ 
Sbjct: 309 IDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMV 368

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY +    + + ++FD + ER+ +SW  +IS +V++G   +A+    E        DS  
Sbjct: 369 MYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVT 428

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG-- 421
              ++   S   NL +G Q H + I+ G   +  + + L+D+YAK G +++A +L +   
Sbjct: 429 ATALLSAASNLRNLYVGKQTHAYLIRRGIQFE-GMESYLIDMYAKSGSIRTAELLFEQNC 487

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            S +  A +NAI++G+ +   +  E  ++L  Q  +  + P+ VT + +L   +S   + 
Sbjct: 488 SSDRDQATWNAIIAGYTQNGLN--EKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMG 545

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
             R LH +SI+     +V VG +L   Y+KCG+I  A  +F    +++ V++  M+  Y 
Sbjct: 546 LARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYG 605

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HG+GK AL L++ M R G  PD ++ + +L AC YSGL + G+ +F  +E+++ ++P +
Sbjct: 606 QHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSI 665

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKRLL 660
           EH+ C+ D+LGR GR+ EA   +       + + +W +L+   +   + +     +K+LL
Sbjct: 666 EHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLL 725

Query: 661 D--LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           +  ++ + AG  +L+SN+YA +G  ++  +VR  M +  L KE GCSW+EI   ++ FV+
Sbjct: 726 NMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVEIAGFVNCFVS 785

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
             + HP+S EIY  LD+L  +MK
Sbjct: 786 RDEKHPQSSEIYYMLDMLTLDMK 808



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 157/603 (26%), Positives = 286/603 (47%), Gaps = 34/603 (5%)

Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE--KFNEHTCSVILEA 168
           +A  L D +   S + W S+I G++ +      L +   M  +     F+ +T S  L+A
Sbjct: 67  LALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKA 126

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNV----FVGTSLISMYFHSGCFRE-AENVFRGLAYK 223
           C+L +D + G+ IH+  ++S    N      V  SL++MY  + C  E A NVF  +  +
Sbjct: 127 CALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMY--ASCQHEYALNVFDVMRRR 184

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           +V   N +IL + K      A   F ++++    P+  TF N+     +       K  +
Sbjct: 185 NVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFY 244

Query: 284 GLAVKFG--VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           G   KFG   V ++ V ++ + M+   G  + A  +FD    +N   W  +I  YV++  
Sbjct: 245 GFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNC 304

Query: 342 GGKAINGFLEFLDL--GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
             +AI+ F++ L+   G+ CD   L +V+   S    ++L  Q H F IK    S + + 
Sbjct: 305 PVEAIDVFIQALESEEGV-CDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIIL 363

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            A++ +Y++   + ++  + D    +    +N I+S F++    DEE +M++   Q+   
Sbjct: 364 NAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQN-GFDEEALMLVCEMQKQKF 422

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           +  D VT + LLS +++   L  G+  HAY I+ G   + +  + LI MYAK GSI  A 
Sbjct: 423 L-IDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGM-ESYLIDMYAKSGSIRTAE 480

Query: 520 QIFKG--ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
            +F+    SDRD  +WNA+++ Y  +GL + A+LL ++M  +   P+ +++  +L AC  
Sbjct: 481 LLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPAC-- 538

Query: 578 SGLSEGGICLFNEIEQIYG--LRPILEHF----ACMVDLLGRAGRLSEAMNLINSSPFSE 631
           S +   G+       Q++G  +R  LE        + D   + G +S A N+   +P   
Sbjct: 539 SSMGSMGLA-----RQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKN 593

Query: 632 SPLLWRTLVSVSKL-MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
           S      ++   +  M     ++  S     + P DA +F+ + +     G++DE  ++ 
Sbjct: 594 SVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRP-DAVTFVAILSACNYSGLVDEGLQIF 652

Query: 691 TTM 693
            +M
Sbjct: 653 ESM 655



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/281 (19%), Positives = 120/281 (42%), Gaps = 20/281 (7%)

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC--DSSCL 364
           + G    A  + D++   + + W ++I G++ +    +A+  + +      C   D    
Sbjct: 61  REGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTF 120

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG------TALVDIYAKGGDLKSARML 418
           ++ +  C++  ++  G  +H   ++    S+   G       +L+++YA     + A  +
Sbjct: 121 SSTLKACALTKDILTGKAIHSHFLRSH--SNTNTGPSRIVYNSLLNMYASCQH-EYALNV 177

Query: 419 LDGFSCKYTAEFNAILSGF--MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            D    +    +N ++  F  M +     E    + +Q  +    P PVTF  L    + 
Sbjct: 178 FDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVM----PSPVTFVNLFPALSK 233

Query: 477 QACLVRGRSLHAYSIKTG--YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
                  +  + +  K G  Y +DV V ++ I M++  G +D A  +F    +++   WN
Sbjct: 234 LGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWN 293

Query: 535 AMLSAYALHGLGKGALLLF-EEMKREGFAPDDISILGVLQA 574
            M+ AY  +     A+ +F + ++ E    DD+++L VL A
Sbjct: 294 TMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTA 334


>gi|413938252|gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
          Length = 709

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 218/688 (31%), Positives = 344/688 (50%), Gaps = 52/688 (7%)

Query: 73  DLKLGQAVHAFLLKSGS----QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           D  L  A+HA LLKSG+    Q     AN+L++ Y +   L  A +L D M  R A T+ 
Sbjct: 38  DTALTSALHAALLKSGALRSRQAPLAAANSLLHAYLQCGLLSRALRLLDEMPRRDAATYA 97

Query: 129 SLIKGYLDDGDYESVLGIACDMYR---SEE-------KFNEHTCSVILEACSLLEDRIFG 178
            LI  +   G     L    DM     S+E       + NE T + +++AC L  D    
Sbjct: 98  PLISAHCRLGAPLDALRAFLDMLAWGCSDEEGVDDVVRPNEFTAAAVVQACGLARDERLA 157

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H + +  GF ++ FV  SL++MY   G    A  +  GL  +DV     ++      
Sbjct: 158 RMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDVASARRLLLGLPCRDVVSWTAIVSGCVLN 217

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              E A  VF+ +L     PN+ T  +VI  C      E    +H L V   +  + SV 
Sbjct: 218 AMLEEALGVFLMMLEDGVLPNNVTMLSVIQACALMGASELFGPVHALVVLLELEHDASVV 277

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N+++ MY K+G  EEA R+F                 Y+++G                +C
Sbjct: 278 NSLIMMYAKNGFVEEAIRLFKGF--------------YLKTG---------------SVC 308

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +   LA V+ GC++  +++ G  LH   IK G    + +  +L+ +YA+   + +A ++
Sbjct: 309 SNEDVLAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAALLV 368

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA---GMEPDPVTFSRLLSLSA 475
            +G   K    +N I+S   +   D   + M +FS    A   G+ PD VT   +L   +
Sbjct: 369 FEGMEVKDIVSWNTIISCLAKT--DRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQACS 426

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           +   L +G+ LH Y +K+G+  DV + NALI+MYAK G ID A  IF+ +  +D+VSWN+
Sbjct: 427 NAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIKDLVSWNS 486

Query: 536 MLSAYALHGLGKGALLLFEEMKREGF-APDDISILGVLQACIYSGL-SEGGICLFNEIEQ 593
           M++AY +HG G  AL +F ++K  G  AP+ I+ + V+ AC +SGL SEG  C F  + +
Sbjct: 487 MINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHKC-FESMGR 545

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            +G+ P ++H+AC+VDLLGR+GR +EA   I   P      +W  L++  +L  N   + 
Sbjct: 546 DHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDMPVRPDSTIWGPLLAACQLHGNVDLAE 605

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS-K 712
            A+K L  LEP+     + +SN YA  G   +AAK+R+ M  + L KE G S++++   +
Sbjct: 606 KAAKELSALEPESDIWRVSLSNTYASVGRWRDAAKIRSEMRRVGLRKETGWSFVDVGGVE 665

Query: 713 LHHFVASGKDHPESEEIYSKLDLLNDEM 740
              FV++   H ++E+IYS    +N  M
Sbjct: 666 GFKFVSADTRHHDAEKIYSVWHSMNRHM 693



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 123/268 (45%), Gaps = 23/268 (8%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG +K G+ +HA  +K G+       N+L+ +YA+F ++D A  +F+GM V+  ++W ++
Sbjct: 324 SGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAALLVFEGMEVKDIVSWNTI 383

Query: 131 IKGYLDDG------DYESVL------GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           I             D  SVL      G+A D           T   +L+ACS       G
Sbjct: 384 ISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFV---------TVLSMLQACSNAGLLHQG 434

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           + +H + +KSGF  +V +  +LISMY   G    AE +F  +  KD+   N MI  Y   
Sbjct: 435 QMLHGYVMKSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIKDLVSWNSMINAYGMH 494

Query: 239 GESEMAFHVFVHLLSSDFE-PNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREIS 296
           G+   A  VF  L  +    PN  TF +VIS C  +  V EG K    +    G+   + 
Sbjct: 495 GDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHKCFESMGRDHGIEPSMD 554

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISER 324
               +V + G+ G   EAE+    +  R
Sbjct: 555 HYACVVDLLGRSGRFAEAEQFIRDMPVR 582


>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
 gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
          Length = 804

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 207/681 (30%), Positives = 355/681 (52%), Gaps = 38/681 (5%)

Query: 80  VHAFLLKSG-SQNDT-FEANNLINLYA-----KFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           VHA +L+   S  DT    N+L+NLYA     +  R+DV ++LFD M  R+ ++W +L  
Sbjct: 127 VHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFG 186

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI-LEACSLLEDRIFGEQIHAFAIKSGFE 191
            Y+  G  +  L +   M   E+ F     S + +   ++ +D  +  Q++   +K G E
Sbjct: 187 WYVKTGRPQEALELFVRML--EDGFRPTPVSFVNIFPAAVADDPSWPFQLYGLLVKYGVE 244

Query: 192 --NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             N++FV +S I M+   G  + A  VF   A K+    N MI  Y + G+   A  +F 
Sbjct: 245 YINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFS 304

Query: 250 HLLSSDFEPNDY-TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV--GNAIVTMYG 306
            +L S   P D  TF + ++   ++  V  G+QLHG  +K G+ R + V  GNA+V MY 
Sbjct: 305 KILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYS 363

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           + G  + A  +FD + E+++++W  +++ ++++    + +    E    G   DS  L  
Sbjct: 364 RCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTA 423

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+   S   +L++G Q HG+ I+HG +    L + L+D+YAK G ++ A+ + D F    
Sbjct: 424 VLSASSNTGDLQIGKQAHGYLIRHG-IEGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAK 482

Query: 427 TAE--FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC----- 479
             E  +NA+++G+ +  +   E  +++F     AG+EP  VT + +L      AC     
Sbjct: 483 RDEVTWNAMIAGYTQ--SGQPEKAILVFRAMLEAGLEPTSVTLASVLP-----ACDPVGG 535

Query: 480 -LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            +  G+ +H ++++     +V VG ALI MY+KCG I  A  +F G++ +  V++  M+S
Sbjct: 536 GVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMIS 595

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
               HG GK AL LF  M+ +G  PD ++ L  + AC YSGL + G+ L+  ++  +G+ 
Sbjct: 596 GLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDS-FGIS 654

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINS-SPFSESPLLWRTLVSVSKLMANSKFSILASK 657
              +H  C+ DLL +AGR+ EA   I           +W +L++  K     + + L +K
Sbjct: 655 ATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTK 714

Query: 658 RLLDLEPK--DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL-- 713
           +LLD+E +   AG  +L+S + A +   + A  +R  M    L KEAG SWI++ +    
Sbjct: 715 KLLDIEKQYGHAGYSVLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWIKVQNAALE 774

Query: 714 HHFVASGKDHPESEEIYSKLD 734
           H F+   +++ E+E ++S LD
Sbjct: 775 HKFIEKDQNYVENEHMFSILD 795



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 174/357 (48%), Gaps = 7/357 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQN-DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           S D+ LGQ +H +L+K   +       N L+ +Y++   +  A  LFD +  +  +TW +
Sbjct: 329 SQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNT 388

Query: 130 LIKGYL-DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++  ++ +D D E +L +  +M +S    +  T + +L A S   D   G+Q H + I+ 
Sbjct: 389 MVTAFIQNDFDLEGLL-LVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRH 447

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFH 246
           G E    + + LI MY  SG    A+ VF     A +D    N MI  Y ++G+ E A  
Sbjct: 448 GIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAIL 506

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           VF  +L +  EP   T  +V+  C     GV  GKQ+H  AV+  +   + VG A++ MY
Sbjct: 507 VFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMY 566

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G    AE +F  ++ ++ +++T +ISG  + G G KA+  F    + G+  D+    
Sbjct: 567 SKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFL 626

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           + I  C+    ++ GL L+      G  +  +    + D+ AK G ++ A   ++G 
Sbjct: 627 SAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGL 683



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 139/276 (50%), Gaps = 6/276 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LV 121
           ++  S  +GDL++G+  H +L++ G + +  E+  LI++YAK  R+++AQ++FD      
Sbjct: 424 VLSASSNTGDLQIGKQAHGYLIRHGIEGEGLES-YLIDMYAKSGRVEMAQRVFDSFKNAK 482

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF-GEQ 180
           R  +TW ++I GY   G  E  + +   M  +  +    T + +L AC  +   ++ G+Q
Sbjct: 483 RDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQ 542

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH FA++   + NVFVGT+LI MY   G    AENVF G+  K       MI    + G 
Sbjct: 543 IHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGF 602

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + A  +F  +     +P+  TF + IS C  +  V+EG  L+     FG+         
Sbjct: 603 GKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCC 662

Query: 301 IVTMYGKHGMSEEAERMFDAISER-NLIS-WTALIS 334
           +  +  K G  EEA    + + E  N ++ W +L++
Sbjct: 663 VADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLA 698



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 10/179 (5%)

Query: 408 KGGDLKSAR-MLLDGFS-CKYTAEFNAILSGFMEKIADDEE-DVMVLFSQQRLAGMEPDP 464
           K G L  AR +LL+       T   NA+L  +  +   +E   +  L +      +  D 
Sbjct: 46  KQGRLDHARRLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDH 105

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA--DVIVGNALITMYA-----KCGSIDG 517
            T+S  L+  A    L  GRS+HA+ ++   +     ++ N+L+ +YA     +   +D 
Sbjct: 106 YTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDV 165

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
             ++F  +  R++VSWN +   Y   G  + AL LF  M  +GF P  +S + +  A +
Sbjct: 166 VRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAV 224


>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 764

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 204/673 (30%), Positives = 347/673 (51%), Gaps = 14/673 (2%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGS---QNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           +L +  +    LK    +HA +L +G+       ++ NNLI++Y +   L+ A+KLFD M
Sbjct: 12  ELTRKCVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKLFDKM 71

Query: 120 LVRSAITWTSLIKGYLDDGDYES-VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
             R+ +++ +L   Y  + DY S    +   M     K N  T + +++ C++LED + G
Sbjct: 72  PERNVVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLMG 131

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H+  IK G+ +NV V TS++ MY   G    A  +F  +   D    N MI+   + 
Sbjct: 132 SLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRN 191

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE---GKQLHGLAVKFGVVREI 295
            + E    +F  +L S  +P  +T++ V++ C   LG      GK +H   +   ++ ++
Sbjct: 192 DKIEDGLMLFRSMLMSGVDPTQFTYSMVLNAC-SKLGSYRYSVGKLIHARMIVSDILADL 250

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V NA++ MY   G  +EA  +F  I   NL+SW ++ISG   +G G +AI  +   L +
Sbjct: 251 PVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRI 310

Query: 356 GIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
                D    +  I   +       G  LHG   K GY   V +GT L+ +Y K G+ +S
Sbjct: 311 STPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAES 370

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A+ +    + +    +  ++ G  E    + E  + LF +        D  + S +L   
Sbjct: 371 AQKVFGVITERDVVLWTEMIVG--ESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGAC 428

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           +  A L +G+  H+ +IKTG+   + V  AL+ MY K G  + A  IF  +S+ D+  WN
Sbjct: 429 SDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWN 488

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           +ML AY+ HG+ + A   FE++   GF PD ++ L +L AC + G ++ G  L+N++++ 
Sbjct: 489 SMLGAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKE- 547

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSI 653
            G+    +H++CMV L+ +AG L EA+ LI  SP   +   LWRTL+S      N +  +
Sbjct: 548 QGITAGFKHYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSACVNARNLQIGL 607

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
            A+ ++L L+P+D  + IL+SN+YA  G   + A++R  +  L  +K+ G SWIE+++  
Sbjct: 608 YAADQILKLDPEDTATHILLSNLYAVNGRWKDVAEMRRKIRGLASAKDPGLSWIEVNNNN 667

Query: 714 HHFVASG-KDHPE 725
            H  +SG + +PE
Sbjct: 668 THVFSSGDQSNPE 680


>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/564 (32%), Positives = 298/564 (52%), Gaps = 12/564 (2%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +QIHA  +K+      FVG  LI+ +        A NVF  +   DV   N +I  + + 
Sbjct: 34  KQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRN 93

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            E  +AF VF  +  S    +++T+  ++  C   + V   + +H    K G   +I V 
Sbjct: 94  SEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVP 153

Query: 299 NAIVTMYGKHGMS--EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           N+++  Y K G+     A ++F+ ++ER+ +SW ++I G V+ G  G+A   F E  +  
Sbjct: 154 NSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPER- 212

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
              D+    T++DG      +    +L     +     +V   + +V  Y+K GD+  AR
Sbjct: 213 ---DTVSWNTILDGYVKAGEMNAAFEL----FEKMPARNVVSWSTMVLGYSKAGDMDMAR 265

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           +L D    K    +  ++SG+ EK     +D + L++Q   AG++ D  T   +LS  A 
Sbjct: 266 ILFDKMPVKNLVPWTIMISGYAEK--GLAKDAINLYNQMEEAGLKFDDGTVISILSACAV 323

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L  G+ +HA   +T +     V NALI MYAKCGS++ A  IF G+  +D+VSWNA+
Sbjct: 324 SGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAI 383

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +   A+HG G+ AL LF  MK EGF PD ++ +GVL AC ++G  + G+  F+ +E+ YG
Sbjct: 384 IQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYG 443

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P +EH+ CMVDLLGR GRL EA  L++S P   + ++W TL+   ++ + +  +    
Sbjct: 444 VPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVF 503

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
            RL+  E  D+G+  ++SN+YA  G  D  A +R  M    + K +G S IE+D ++H F
Sbjct: 504 DRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEF 563

Query: 717 VASGKDHPESEEIYSKLDLLNDEM 740
               + HP+S+ IY  +D L   +
Sbjct: 564 TVFDRSHPKSDRIYKTIDGLGQHI 587



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 137/287 (47%), Gaps = 6/287 (2%)

Query: 53  ERTLLFNDWPQLVKIS---IGSGDLKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNR 108
           E   LF++ P+   +S   I  G +K G+   AF L +     +    + ++  Y+K   
Sbjct: 201 EARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGD 260

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           +D+A+ LFD M V++ + WT +I GY + G  +  + +   M  +  KF++ T   IL A
Sbjct: 261 MDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSA 320

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C++      G+++HA   ++ F+ +  V  +LI MY   G    A ++F G+  KDV   
Sbjct: 321 CAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSW 380

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAV 287
           N +I      G  E A  +F  +    F P+  TF  V+  C     V+EG    H +  
Sbjct: 381 NAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMER 440

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            +GV  E+     +V + G+ G  +EA R+  ++  E N I W  L+
Sbjct: 441 DYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLL 487



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 174/383 (45%), Gaps = 23/383 (6%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK--FNRLDVAQKLFDG 118
           +P L+K   G   +++ + +HA + K G   D F  N+LI+ Y K   + +  A+K+F+ 
Sbjct: 118 YPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEV 177

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R  ++W S+I G +  G+    LG A  ++    + +  + + IL+          G
Sbjct: 178 MAERDTVSWNSMIGGLVKVGE----LGEARRLFDEMPERDTVSWNTILDGYVKA-----G 228

Query: 179 EQIHAFAIKSGFEN----NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
           E   AF +   FE     NV   ++++  Y  +G    A  +F  +  K++     MI  
Sbjct: 229 EMNAAFEL---FEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISG 285

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
           Y + G ++ A +++  +  +  + +D T  +++S C  +  +  GK++H    +      
Sbjct: 286 YAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCS 345

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
             V NA++ MY K G  E A  +F  +  ++++SW A+I G    GHG KA+  F     
Sbjct: 346 TPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKG 405

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
            G   D      V+  C+    ++ GL   H     +G   +V     +VD+  +GG LK
Sbjct: 406 EGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLK 465

Query: 414 SARMLLDGFSCKYTAEFNAILSG 436
            A  L+         E NAI+ G
Sbjct: 466 EAFRLVHSMPL----EPNAIIWG 484



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 212/477 (44%), Gaps = 58/477 (12%)

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           KQ+H   +K  + RE  VG  ++  +        A  +F+ I + +++ +  LI  +VR+
Sbjct: 34  KQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRN 93

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
                A + F E  D G+C D+     ++  CS    + +   +H    K G+  D+ + 
Sbjct: 94  SEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVP 153

Query: 400 TALVDIYAKGG--DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
            +L+D Y K G   + +AR + +  + + T  +N+++ G + K+ +  E    LF +   
Sbjct: 154 NSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLV-KVGELGE-ARRLFDEMP- 210

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI-KTGYAADVIVGNALITMYAKCGSID 516
              E D V+++ +L        +  G    A+ + +   A +V+  + ++  Y+K G +D
Sbjct: 211 ---ERDTVSWNTIL-----DGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMD 262

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A  +F  +  +++V W  M+S YA  GL K A+ L+ +M+  G   DD +++ +L AC 
Sbjct: 263 MARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACA 322

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFAC-------MVDLLGRAGRLSEAMNLINSSPF 629
            SGL   G  +   IE+          F C       ++D+  + G L  A+++ +    
Sbjct: 323 VSGLLGLGKRVHASIERT--------RFKCSTPVSNALIDMYAKCGSLENALSIFHG--- 371

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
               ++ + +VS + ++             L +      +  L S M  G+G + +    
Sbjct: 372 ----MVRKDVVSWNAIIQG-----------LAMHGHGEKALQLFSRM-KGEGFVPDKV-- 413

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH---PESEEIYSKLDLLNDEMKLK 743
            T +  L     AG     +D  LH+F A  +D+   PE E     +DLL    +LK
Sbjct: 414 -TFVGVLCACTHAGF----VDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLK 465


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 180/554 (32%), Positives = 300/554 (54%), Gaps = 8/554 (1%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVF   +LI+ Y        A  VF  +   D+   N +I  Y   GE   A  +F  + 
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              F  + +T + VI  C +++G+   +QLH   V  G     SV NA++  Y + G   
Sbjct: 134 ELRFGLDGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191

Query: 313 EAERMFDAISE---RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           EA R+F  + E   R+ +SW A+I    +   G +A+  F E +  G+  D   +A+V+ 
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTA 428
             +   +L  G+Q HG  IK G+  +  +G+ L+D+Y+K  G +   R + +  +     
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLV 311

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N ++SGF  +  D  ED +  F + +  G  PD  +F  + S  ++ +    G+ +HA
Sbjct: 312 LWNTMISGF-SQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHA 370

Query: 489 YSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            +IK+    + V V NAL+ MY+KCG++  A ++F  + + ++VS N+M++ YA HG+  
Sbjct: 371 LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEV 430

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            +L LFE M ++  AP+ I+ + VL AC+++G  E G   FN +++ + + P  EH++CM
Sbjct: 431 ESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCM 490

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           +DLLGRAG+L EA  +I + PF+   + W TL+   +   N + ++ A+   L LEP +A
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNA 550

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
             ++++SNMYA     +EAA V+  M +  + K+ GCSWIEID K+H FVA    HP  +
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610

Query: 728 EIYSKLDLLNDEMK 741
           EI+  +  +  +MK
Sbjct: 611 EIHVYMGEILRKMK 624



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 202/468 (43%), Gaps = 50/468 (10%)

Query: 56  LLFNDWPQLVKISIGSGDLKLGQAVHAFLLKS-------------------GSQND---- 92
           L    +  L+K  I   DL  G+ +HA   KS                   GS ++    
Sbjct: 7   LQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66

Query: 93  --------TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL 144
                    F  N LIN YAK + + +A+++FD +     +++ +LI  Y D G+    L
Sbjct: 67  FDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPAL 126

Query: 145 GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
            +  ++       +  T S ++ AC   +D     Q+H F +  G++    V  ++++ Y
Sbjct: 127 RLFAEVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACY 184

Query: 205 FHSGCFREAENVFRGLAY---KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY 261
              G   EA  VFR +     +D    N MI+   +  E   A  +F  ++    + + +
Sbjct: 185 SRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMF 244

Query: 262 TFTNVIS--VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-HGMSEEAERMF 318
           T  +V++   C ++L    G Q HG+ +K G      VG+ ++ +Y K  G   E  ++F
Sbjct: 245 TMASVLTAFTCVKDL--VGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVF 302

Query: 319 DAISERNLISWTALISGYVR-SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           + I+  +L+ W  +ISG+ +        I  F E    G   D      V   CS  S+ 
Sbjct: 303 EEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSP 362

Query: 378 ELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
            +G Q+H  AIK     + V +  ALV +Y+K G++  AR + D          N++++G
Sbjct: 363 SVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAG 422

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           + +   + E   + LF       + P+ +TF  +LS     AC+  G+
Sbjct: 423 YAQHGVEVES--LRLFELMLQKDIAPNTITFIAVLS-----ACVHTGK 463



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 167/355 (47%), Gaps = 7/355 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV---RSAITWTS 129
           D+ L + +H F++  G        N ++  Y++   L+ A+++F  M     R  ++W +
Sbjct: 154 DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNA 213

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I       +    + +  +M R   K +  T + +L A + ++D + G Q H   IKSG
Sbjct: 214 MIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSG 273

Query: 190 FENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE-SEMAFHV 247
           F  N  VG+ LI +Y   +G   E   VF  +A  D+   N MI  +++  + SE     
Sbjct: 274 FHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWC 333

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYG 306
           F  +  + F P+D +F  V S C        GKQ+H LA+K  +    +SV NA+V MY 
Sbjct: 334 FREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYS 393

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G   +A R+FD + E N++S  ++I+GY + G   +++  F   L   I  ++     
Sbjct: 394 KCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIA 453

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLD 420
           V+  C     +E G +      +   +  +    + ++D+  + G LK A  +++
Sbjct: 454 VLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIE 508



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 154/350 (44%), Gaps = 40/350 (11%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVK-----------------------------FGVV 292
           TF N++  C     +  GK LH L  K                             F + 
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 293 REISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
           +  +V   N ++  Y KH +   A ++FD I + +++S+  LI+ Y   G    A+  F 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
           E  +L    D   L+ VI  C    ++ L  QLH F +  GY     +  A++  Y++ G
Sbjct: 131 EVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKG 188

Query: 411 DLKSARMLLDGF---SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
            L  AR +         +    +NA++    +    +  + + LF +    G++ D  T 
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQH--REGLEAVELFREMVRRGLKVDMFTM 246

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC-GSIDGAFQIFKGIS 526
           + +L+       LV G   H   IK+G+  +  VG+ LI +Y+KC G +    ++F+ I+
Sbjct: 247 ASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA 306

Query: 527 DRDIVSWNAMLSAYALH-GLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             D+V WN M+S ++ +  L +  +  F EM+  GF PDD S + V  AC
Sbjct: 307 APDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSAC 356



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 7/289 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF-NRLDVAQKLFDGMLVRSAITWTSLI 131
           DL  G   H  ++KSG   ++   + LI+LY+K    +   +K+F+ +     + W ++I
Sbjct: 258 DLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMI 317

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCS--VILEACSLLEDRIFGEQIHAFAIKSG 189
            G+    D  S  GI C        F+   CS   +  ACS L     G+Q+HA AIKS 
Sbjct: 318 SGFSQYEDL-SEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSD 376

Query: 190 FE-NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
              N V V  +L++MY   G   +A  VF  +   ++  +N MI  Y + G    +  +F
Sbjct: 377 IPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLF 436

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGK 307
             +L  D  PN  TF  V+S C     VEEG K  + +  +F +  E    + ++ + G+
Sbjct: 437 ELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGR 496

Query: 308 HGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            G  +EAER+ + +      I W  L+    + G+   A+    EFL L
Sbjct: 497 AGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQL 545


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 174/547 (31%), Positives = 290/547 (53%), Gaps = 37/547 (6%)

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            + ++F   +L+S Y  SG  +  +  F  + ++D    N  I  ++     + +  +F 
Sbjct: 85  LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +    FEP +YT  ++++   +   +  GKQ+HG  +    +  + + NA+  MY K G
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E+A  +FD ++++NL+SW  +ISGY ++G   K I G L  + L              
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCI-GLLHQMRLS------------- 250

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
                                G++ D    + ++  Y + G +  AR +   F  K    
Sbjct: 251 ---------------------GHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVC 289

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A++ G+ +     EED ++LF++  L  +EPD  T S ++S  A  A L  G+++H  
Sbjct: 290 WTAMMVGYAKN--GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK 347

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           SI  G   +++V +ALI MY+KCG ID A  +F  +  R++VSWNAM+   A +G  K A
Sbjct: 348 SILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDA 407

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L LFE M ++ F PD+++ +G+L AC++    E G   F+ I   +G+ P L+H+ACMV+
Sbjct: 408 LELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVN 467

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGR GR+ +A+ LI +       L+W TL+S+     +   + +A++ L +L+P  A  
Sbjct: 468 LLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVP 527

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           +I++SNMYA  G   + A VR  M    + K AG SWIEID+++H F +  + HPESE+I
Sbjct: 528 YIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDI 587

Query: 730 YSKLDLL 736
           Y KL++L
Sbjct: 588 YEKLNML 594



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 228/528 (43%), Gaps = 71/528 (13%)

Query: 51  CSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRL 109
           CS  T     + QLV   + + ++   + + + +     Q  D+F  N L++LYAKF +L
Sbjct: 15  CSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKL 74

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL----------------------GIA 147
             AQ LFD ML R   +W +L+  Y   G  +++                       G +
Sbjct: 75  RDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNS 134

Query: 148 CD---------MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
           C          M R   +  E+T   IL A + L D  +G+QIH   I   F  NVF+  
Sbjct: 135 CPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWN 194

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +L  MY   G   +A  +F  L  K++   N MI  Y K G+ E    +   +  S   P
Sbjct: 195 ALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMP 254

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +  T + +I+                                    Y + G  +EA R+F
Sbjct: 255 DQVTMSTIIAA-----------------------------------YCQCGRVDEARRVF 279

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
               E++++ WTA++ GY ++G    A+  F E L   I  DS  L++V+  C+  ++L 
Sbjct: 280 SEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLH 339

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
            G  +HG +I  G  +++ + +AL+D+Y+K G +  AR + +    +    +NA++ G  
Sbjct: 340 HGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCA 399

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGYAA 497
           +   D  +D + LF        +PD VTF  +LS       + +G+    + + + G   
Sbjct: 400 QNGHD--KDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTP 457

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
            +     ++ +  + G I+ A  + K ++ D D + W+ +LS  +  G
Sbjct: 458 TLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 46/337 (13%)

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME-------KIADDE- 445
           +D  L   L+ +YAK G L+ A+ L D    +    +NA+LS + +       K   D  
Sbjct: 56  TDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRM 115

Query: 446 ---------------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
                                ++ + LF + +  G EP   T   +L+ SA  + L  G+
Sbjct: 116 PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGK 175

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +H   I   +  +V + NAL  MYAKCG I+ A  +F  ++ +++VSWN M+S YA +G
Sbjct: 176 QIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
             +  + L  +M+  G  PD +++  ++ A    G  +    +F+E ++    + I+   
Sbjct: 236 QPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE----KDIVCWT 291

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFS----ESPLLWRTLVSVSKLMANSKFSILASKRLL 660
           A MV    + GR  +A+ L N         +S  L   + S +KL +      +  K +L
Sbjct: 292 AMMVG-YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350

Query: 661 DLEPKDAGSFILVS----NMYAGQGMLDEAAKVRTTM 693
                   + +LVS    +MY+  G +D+A  V   M
Sbjct: 351 ----AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 199/630 (31%), Positives = 321/630 (50%), Gaps = 73/630 (11%)

Query: 198 TSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS- 254
           TSL++    +G  R+A   F  +  A +D    N M+  + +A  +  A  VF  LL S 
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 255 DFEPNDYTFTNVISVCYE--NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              P+DY+FT +IS   +  NL      QLH   +K G    +SV NA++ +Y K    E
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 313 ---EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE---------------FLD 354
              +A ++ D + +++ ++WT ++ GYVR G    A + F E               ++ 
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 355 LGICCDSSCL----------------ATVIDGCSVCSNLELGLQLHGFAIK--HGYLSDV 396
            G+C D+  L                 +V+  C+       G  +HG  I+    ++ + 
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335

Query: 397 RL--GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE--------- 445
            L    ALV +Y+KGG +  A+ + D  + K    +N ILSG+++    D+         
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395

Query: 446 --------------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
                               ED + LF+Q R   ++P   T++  ++       L  GR 
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           LHA+ ++ G+ A    GNAL+TMYAKCG+++ A  +F  + + D VSWNAM+SA   HG 
Sbjct: 456 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGH 515

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G+ AL LF++M  EG  PD IS L +L AC ++GL + G   F  +++ +G+ P  +H+A
Sbjct: 516 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
            ++DLLGR+GR+ EA +LI + PF  +P +W  ++S  +   + +F   A+ +L  + P+
Sbjct: 576 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
             G++IL+SN Y+  G   +AA+VR  M D  + KE GCSWIE+ SK+H F+     HPE
Sbjct: 636 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPE 695

Query: 726 SEEIYSKLDLLNDEM-KLKVKDSSAFELQD 754
           ++E+Y  L+++   M KL     + F L D
Sbjct: 696 AQEVYQFLEVIGARMRKLGYVPDTKFVLHD 725



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 185/432 (42%), Gaps = 79/432 (18%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDV---AQKLFDGMLVRSAITWTSLIKGYLD 136
           +H  +LKSG+      +N LI LY K +  +    A+K+ D M  +  +TWT+++ GY+ 
Sbjct: 185 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 244

Query: 137 DGD-------YESVLGI--------------------ACDMYR---SEE-KFNEHTCSVI 165
            GD       +E V G                     A +++R   SE+   +E T + +
Sbjct: 245 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 304

Query: 166 LEACSLLEDRIFGEQIHA--------FAIKSGFE-NNVFVG------------------- 197
           L AC+     + G+ +H         F  ++    NN  V                    
Sbjct: 305 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 364

Query: 198 -------TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
                   +++S Y  SGC  +A  VF+ + YK+      M+  Y   G SE A  +F  
Sbjct: 365 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 424

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + + D +P DYT+   I+ C E   ++ G+QLH   V+ G     S GNA++TMY K G 
Sbjct: 425 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 484

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             +A  +F  +   + +SW A+IS   + GHG +A+  F + +  GI  D     T++  
Sbjct: 485 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 544

Query: 371 CSVCSNLELGLQL-----HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           C+    ++ G          F I  G     R    L+D+  + G +  AR L+     +
Sbjct: 545 CNHAGLVDEGFHYFESMKRDFGISPGEDHYAR----LIDLLGRSGRIGEARDLIKTMPFE 600

Query: 426 YTAE-FNAILSG 436
            T   + AILSG
Sbjct: 601 PTPSIWEAILSG 612



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 128/302 (42%), Gaps = 39/302 (12%)

Query: 77  GQAVHAFLLKSGSQNDTFEA-----NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G++VH  +++    N   EA     N L+ LY+K  ++ +A+++FD M ++  ++W +++
Sbjct: 317 GKSVHGQIIRL-QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTIL 375

Query: 132 KGYLDDG------------DY-------------------ESVLGIACDMYRSEEKFNEH 160
            GY+D G             Y                   E  L +   M   + K  ++
Sbjct: 376 SGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDY 435

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T +  + AC  L     G Q+HA  ++ GFE +   G +L++MY   G   +A  VF  +
Sbjct: 436 TYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVM 495

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG- 279
              D    N MI    + G    A  +F  +++   +P+  +F  +++ C     V+EG 
Sbjct: 496 PNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGF 555

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVR 338
                +   FG+         ++ + G+ G   EA  +   +  E     W A++SG   
Sbjct: 556 HYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRT 615

Query: 339 SG 340
           +G
Sbjct: 616 NG 617


>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 199/643 (30%), Positives = 336/643 (52%), Gaps = 17/643 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D +  + +HA +L  G  + T     L+  YAK   +  A ++FDGM  R++  W ++IK
Sbjct: 68  DFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIK 127

Query: 133 GYLDDGDYESVL----GIACDMYRSEEKFNEHTCSVILEACSLL----EDRIFGEQIHAF 184
           G +D G +   L    G+  D   + + F   T   +++AC+ L    + R   E +   
Sbjct: 128 GLVDAGRFSEALEMFWGMVNDGSVAVDGF---TYPPVIKACAALGAVAQGRKVWEMVETD 184

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
                   NVFV  +L+ M+   GC  EA NVF  +  +D+     MI     +G     
Sbjct: 185 IASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEV 244

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             +F H+ S  F  +      VIS C     ++ G  LHG AVK G   +I V NA+V M
Sbjct: 245 VDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDM 304

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  E A+ +F + + ++++SW++LI GY ++G    +++ F E + LGI  +SS L
Sbjct: 305 YCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTL 364

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           A+++   SV   +  G ++H F+I+HG      + +AL+D+Y+K G ++ A  +      
Sbjct: 365 ASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLD 424

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K  A +N++++G+      D     +   Q+   G++PD VT   +L L      L++G+
Sbjct: 425 KDLAIWNSMVAGYAVNGYSDSAFCALRLLQK--VGLKPDHVTVVSVLPLCNQHHMLIQGK 482

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            LHAY IK    +   V NAL+ MY KCG ++ A ++F+ +++R+ V++N ++S++  H 
Sbjct: 483 ELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHN 542

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
               AL  F+ MKR+G APD ++ + +L  C ++GL + G+ L++ +   Y + P  EH+
Sbjct: 543 HEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY 602

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLL--WRTLVSVSKLMANSKFSILASKRLLDL 662
           +C+VDL  R G+L EA   +  S  +E P +     L++  ++      + L  KR+ + 
Sbjct: 603 SCIVDLYSRCGKLDEAWCFM--SNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQ 660

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
            P D G  IL+SN+YA  GM  +  ++RT + +  L KE G S
Sbjct: 661 NPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNS 703



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 19/355 (5%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G+L++G A+H   +KSG+  D + +N L+++Y K   +++A  LF     +  ++W+SL
Sbjct: 273 AGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSL 332

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY  +G +   + + C+M       N  T + IL   S+L+    G++IH F+I+ G 
Sbjct: 333 IVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGL 392

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E + FV ++LI +Y   G  R AE +F     KD+   N M+  Y   G S+ AF     
Sbjct: 393 ERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRL 452

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L     +P+  T  +V+ +C ++  + +GK+LH   +K+ +    SV NA++ MY K G 
Sbjct: 453 LQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGF 512

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL----GICCDSSCLAT 366
            E A+ +F  ++ERN +++  LIS + +  H  +A    L F DL    GI  D      
Sbjct: 513 LEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQA----LSFFDLMKRDGIAPDKVTFVA 568

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG------TALVDIYAKGGDLKSA 415
           ++  CS    ++ GL L+     H  L D  +       + +VD+Y++ G L  A
Sbjct: 569 LLSCCSHAGLIDKGLHLY-----HSMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 618


>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
          Length = 804

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 207/681 (30%), Positives = 355/681 (52%), Gaps = 38/681 (5%)

Query: 80  VHAFLLKSG-SQNDT-FEANNLINLYA-----KFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           VHA +L+   S  DT    N+L+NLYA     +  R+DV ++LFD M  R+ ++W +L  
Sbjct: 127 VHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFG 186

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI-LEACSLLEDRIFGEQIHAFAIKSGFE 191
            Y+  G  +  L +   M   E+ F     S + +   ++ +D  +  Q++   +K G E
Sbjct: 187 WYVKTGRPQEALELFVRML--EDGFRPTPVSFVNIFPAAVADDPSWPFQLYGLLVKYGVE 244

Query: 192 --NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             N++FV +S I M+   G  + A  VF   A K+    N MI  Y + G+   A  +F 
Sbjct: 245 YINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFS 304

Query: 250 HLLSSDFEPNDY-TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV--GNAIVTMYG 306
            +L S   P D  TF + ++   ++  V  G+QLHG  +K G+ R + V  GNA+V MY 
Sbjct: 305 KILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYS 363

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           + G  + A  +FD + E+++++W  +++ ++++    + +    E    G   DS  L  
Sbjct: 364 RCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTA 423

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+   S   +L++G Q HG+ I+HG +    L + L+D+YAK G ++ A+ + D F    
Sbjct: 424 VLSASSNTGDLQIGKQAHGYLIRHG-IEGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAK 482

Query: 427 TAE--FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC----- 479
             E  +NA+++G+ +  +   E  +++F     AG+EP  VT + +L      AC     
Sbjct: 483 RDEVTWNAMIAGYTQ--SGQPEKAILVFRAMLEAGLEPTSVTLASVLP-----ACDPVGG 535

Query: 480 -LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            +  G+ +H ++++     +V VG ALI MY+KCG I  A  +F G++ +  V++  M+S
Sbjct: 536 GVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMIS 595

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
               HG GK AL LF  M+ +G  PD ++ L  + AC YSGL + G+ L+  ++  +G+ 
Sbjct: 596 GLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDS-FGIS 654

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINS-SPFSESPLLWRTLVSVSKLMANSKFSILASK 657
              +H  C+ DLL +AGR+ EA   I           +W +L++  K     + + L +K
Sbjct: 655 ATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTK 714

Query: 658 RLLDLEPK--DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL-- 713
           +LLD+E +   AG  +L+S + A +   + A  +R  M    L KEAG SWI++ +    
Sbjct: 715 KLLDIEKQYGHAGYSVLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWIKVQNAALE 774

Query: 714 HHFVASGKDHPESEEIYSKLD 734
           H F+   +++ E+E ++S LD
Sbjct: 775 HKFIEKDQNYVENEHMFSILD 795



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 174/357 (48%), Gaps = 7/357 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQN-DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           S D+ LGQ +H +L+K   +       N L+ +Y++   +  A  LFD +  +  +TW +
Sbjct: 329 SQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNT 388

Query: 130 LIKGYL-DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++  ++ +D D E +L +  +M +S    +  T + +L A S   D   G+Q H + I+ 
Sbjct: 389 MVTAFIQNDFDLEGLL-LVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRH 447

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFH 246
           G E    + + LI MY  SG    A+ VF     A +D    N MI  Y ++G+ E A  
Sbjct: 448 GIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAIL 506

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           VF  +L +  EP   T  +V+  C     GV  GKQ+H  AV+  +   + VG A++ MY
Sbjct: 507 VFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMY 566

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G    AE +F  ++ ++ +++T +ISG  + G G KA+  F    + G+  D+    
Sbjct: 567 SKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFL 626

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           + I  C+    ++ GL L+      G  +  +    + D+ AK G ++ A   ++G 
Sbjct: 627 SAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGL 683



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 139/276 (50%), Gaps = 6/276 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LV 121
           ++  S  +GDL++G+  H +L++ G + +  E+  LI++YAK  R+++AQ++FD      
Sbjct: 424 VLSASSNTGDLQIGKQAHGYLIRHGIEGEGLES-YLIDMYAKSGRVEMAQRVFDSFKNAK 482

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF-GEQ 180
           R  +TW ++I GY   G  E  + +   M  +  +    T + +L AC  +   ++ G+Q
Sbjct: 483 RDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQ 542

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH FA++   + NVFVGT+LI MY   G    AENVF G+  K       MI    + G 
Sbjct: 543 IHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGF 602

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + A  +F  +     +P+  TF + IS C  +  V+EG  L+     FG+         
Sbjct: 603 GKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCC 662

Query: 301 IVTMYGKHGMSEEAERMFDAISER-NLIS-WTALIS 334
           +  +  K G  EEA    + + E  N ++ W +L++
Sbjct: 663 VADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLA 698



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 17/257 (6%)

Query: 408 KGGDLKSAR-MLLDGFS-CKYTAEFNAILSGFMEKIADDEE-DVMVLFSQQRLAGMEPDP 464
           K G L  AR +LL+       T   NA+L  + ++   +E   +  L +      +  D 
Sbjct: 46  KQGRLDHARRLLLEALPRPPPTLLCNALLIAYADRALQEEALRLNALLNHAARPPVRSDH 105

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA--DVIVGNALITMYA-----KCGSIDG 517
            T+S  L+  A    L  GRS+HA+ ++   +     ++ N+L+ +YA     +   +D 
Sbjct: 106 YTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDV 165

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
             ++F  +  R++VSWN +   Y   G  + AL LF  M  +GF P  +S + +  A + 
Sbjct: 166 VRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVA 225

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHF--ACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
              S     L+  + + YG+  I + F  +  +D+    G +  A  + + +   ++  +
Sbjct: 226 DDPS-WPFQLYGLLVK-YGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAA-KKNTEV 282

Query: 636 WRTLVSVSKLMANSKFS 652
           W T+  ++  + N +FS
Sbjct: 283 WNTM--ITGYVQNGQFS 297


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 191/582 (32%), Positives = 299/582 (51%), Gaps = 34/582 (5%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + N+F   +L+S Y   G  ++ + VF  +   DV   N ++  Y   G    +  V+  
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127

Query: 251 LLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           +L       N  TF+ ++ +      V+ G+Q+HG   KFG    + VG+ +V MY K G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 310 MSEEAERMFDAISERNL-------------------------------ISWTALISGYVR 338
              +A R+F+ I E+N+                               ISWT +I+G  +
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G   +A++ F E    G C D     +V+  C     L+ G Q+H + I+  Y  ++ +
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           G+AL+D+Y K  ++K A  +      K    + A+L G+ +     EE V +    QR  
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQN-GYSEEAVRIFCDMQR-N 365

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
            + PD  T   ++S  A+ A L  G   H  ++ +G    V V NALIT+Y KCGS++ A
Sbjct: 366 EIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHA 425

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            Q+F  +  RD VSW A++S YA  G     + LFE M   G  PD ++ +GVL AC  +
Sbjct: 426 HQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRA 485

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           GL E G   F  + + + + PI +H+ CM+DLL RAGRL EA N IN  PFS   + W T
Sbjct: 486 GLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWAT 545

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+S  +L  N +    A++ L  LEP++  S+IL+S++YA +G  D+ AK+R  M ++ +
Sbjct: 546 LLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGV 605

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
            KE G SWI+  +K+H F A  +  P S++IY+KL+ L  +M
Sbjct: 606 KKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKM 647



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 197/389 (50%), Gaps = 32/389 (8%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK------------------ 105
           ++ +S   G + LG+ +H  + K G Q+  F  + L+++YAK                  
Sbjct: 144 MLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKN 203

Query: 106 ---FNRLDV----------AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
              +N +            A++LFD M  + +I+WT++I G   +G ++  +    +M  
Sbjct: 204 IVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGI 263

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
                ++ T   +L AC        G+QIHA+ I++ +++N+FVG++L+ MY      + 
Sbjct: 264 EGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKY 323

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           AE VFR + +K+V     M++ Y + G SE A  +F  +  ++  P+D+T  +VIS C  
Sbjct: 324 AEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCAN 383

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
              +EEG Q HG A+  G++  ++V NA++T+YGK G  E A ++F  +  R+ +SWTAL
Sbjct: 384 LASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTAL 443

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           +SGY + G   + I+ F   L  GI  D      V+  CS    +E G       +K   
Sbjct: 444 VSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHR 503

Query: 393 LSDV-RLGTALVDIYAKGGDLKSARMLLD 420
           ++ +    T ++D+ ++ G L+ A+  ++
Sbjct: 504 ITPIPDHYTCMIDLLSRAGRLEEAKNFIN 532



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 246/551 (44%), Gaps = 47/551 (8%)

Query: 37  KSQVAYL-CSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFE 95
           ++QV  L C I     +  T L+N+   L+      GDLK  + V   +     Q + F 
Sbjct: 21  RAQVKKLHCRIIRTLTNPETFLYNN---LINTYGKLGDLKNARNVFDHI----PQPNLFS 73

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG-DYESVLGIACDMYRSE 154
            N L++ Y+K   L   Q++FD M     ++W SL+ GY  +G   ESV      +    
Sbjct: 74  WNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGS 133

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
              N  T S +L   S       G QIH    K G+++ +FVG+ L+ MY  +G   +A 
Sbjct: 134 VNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDAN 193

Query: 215 NVFRGLAYKDVRCVNFMI--------------LEYNKAGESEMAFHVFVHLLSSD----- 255
            +F  +  K++   N MI              L  N   +  +++   +  L+ +     
Sbjct: 194 RIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKE 253

Query: 256 ------------FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
                       F  + +TF +V++ C   L ++EGKQ+H   ++      I VG+A++ 
Sbjct: 254 AVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLD 313

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K    + AE +F  +  +N+ISWTA++ GY ++G+  +A+  F +     I  D   
Sbjct: 314 MYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFT 373

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L +VI  C+  ++LE G Q HG A+  G +  V +  AL+ +Y K G L+ A  L     
Sbjct: 374 LGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMK 433

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    + A++SG+ +    +E   + LF      G+ PD VTF  +LS  +    + +G
Sbjct: 434 IRDEVSWTALVSGYAQFGKANE--TISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKG 491

Query: 484 RSLHAYSIKTGYAADVIVG-NALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYA 541
                  +K      +      +I + ++ G ++ A      +    D + W  +LS+  
Sbjct: 492 YHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCR 551

Query: 542 LHG---LGKGA 549
           L+G   +GK A
Sbjct: 552 LNGNLEIGKWA 562



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 192/441 (43%), Gaps = 65/441 (14%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +T  +  C E     + K+LH   ++     E  + N ++  YGK G  + A  +FD I 
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67

Query: 323 ERNLISWTALISGYVRSGH-----------------------GGKAINGFLE-------- 351
           + NL SW  L+S Y + G+                        G A NG +         
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127

Query: 352 -FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
              D  +  +    +T++   S    ++LG Q+HG   K GY S + +G+ LVD+YAK G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFM--------EKIADD--EEDVMVL--------- 451
            +  A  + +    K    +N +++G +        E++ D+  E+D +           
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247

Query: 452 ----------FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
                     F +  + G   D  TF  +L+       L  G+ +HAY I+T Y  ++ V
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
           G+AL+ MY KC ++  A  +F+ +  ++++SW AML  Y  +G  + A+ +F +M+R   
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEI 367

Query: 562 APDDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            PDD ++  V+ +C   + L EG    F+      GL   +     ++ L G+ G L  A
Sbjct: 368 HPDDFTLGSVISSCANLASLEEGA--QFHGQALASGLICFVTVSNALITLYGKCGSLEHA 425

Query: 621 MNLINSSPFSESPLLWRTLVS 641
             L +     +  + W  LVS
Sbjct: 426 HQLFHEMKIRDE-VSWTALVS 445


>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Vitis vinifera]
 gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 197/620 (31%), Positives = 316/620 (50%), Gaps = 10/620 (1%)

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W S I   ++ G     L +   M ++  + N  T   + +ACS L +  + + +H   +
Sbjct: 22  WNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVV 81

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           KS F+ ++FV TS++ MY        A N+F  +  +DV   N MIL + + G  +    
Sbjct: 82  KSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVS 141

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL---HGLAVKFGVVREISVGNAIVT 303
           +F  +       +  T   VI + +  L +++ K L   H   +K G+  ++SV N  + 
Sbjct: 142 LFCEMGIEGIRADSVT---VIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIA 198

Query: 304 MYGKHGMSEEAERMFDAISE--RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
            Y K G    AE +FD I +  +  +SW ++I+GY       KA+  F + L  G   D 
Sbjct: 199 AYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADL 258

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           S + +++  C     L  G  +H   I+ G  SD+++   L+ +Y+K GD+ SAR L D 
Sbjct: 259 STILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDN 318

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    + A+++G+ EK   D ++ M LFS     G +PD VT   L+S       L 
Sbjct: 319 MLGKTRVSWTAMIAGYAEK--GDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALE 376

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ +  Y+   G   +++V NALI +YAKCGS+D A ++F  + ++ +VSW  +++  A
Sbjct: 377 LGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCA 436

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
           L+G  K AL LF +M   G  P+ I+ L VLQAC ++G  E G   FN + ++Y + P L
Sbjct: 437 LNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGL 496

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           +H++CM DLLGR GRL EA   I + PF     +W  L+S  K+  N       +  L +
Sbjct: 497 DHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFE 556

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           LEP+ A  ++ ++N+YA  G  D  A +RT M   +  K  G S ++++ K H F    +
Sbjct: 557 LEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKSLVQVNGKTHEFTVEDR 616

Query: 722 DHPESEEIYSKLDLLNDEMK 741
            HPE   IY  L+ L  +MK
Sbjct: 617 CHPEGLLIYETLENLALQMK 636



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 224/490 (45%), Gaps = 14/490 (2%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P + K      +LK  Q VH  ++KS  Q D F   +++++Y K ++L  A  LF  M  
Sbjct: 58  PSVAKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPK 117

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R   +W S+I G+   G  + V+ + C+M     + +  T   +  +   L+D    E I
Sbjct: 118 RDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESI 177

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAG 239
           H+F IK G + +V V  + I+ Y   G F  AE VF G+    K     N MI  Y    
Sbjct: 178 HSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFE 237

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           +   A   F  +L   F  +  T  +++S C +   +  GK +H   ++ G   +I V N
Sbjct: 238 QCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVIN 297

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            +++MY K G    A  +FD +  +  +SWTA+I+GY   G   +A+  F     +G   
Sbjct: 298 TLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKP 357

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   + +++ GC     LELG  +  +A  +G   ++ +  AL+D+YAK G + +AR L 
Sbjct: 358 DLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELF 417

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                K    +  +++G    +  + ++ + LF Q    G++P+ +TF  +L        
Sbjct: 418 YTMPEKSLVSWTTLIAGC--ALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGF 475

Query: 480 LVRGRS-----LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSW 533
           L +G          Y I  G      + + L     + G +  AF+  + +  + D+  W
Sbjct: 476 LEKGWECFNLMTKVYKINPGLDHYSCMADLL----GRKGRLKEAFEFIQNMPFKPDVGIW 531

Query: 534 NAMLSAYALH 543
           + +LSA  +H
Sbjct: 532 SVLLSACKIH 541


>gi|413918395|gb|AFW58327.1| hypothetical protein ZEAMMB73_709604 [Zea mays]
          Length = 906

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 196/705 (27%), Positives = 360/705 (51%), Gaps = 39/705 (5%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF--NRLDV-AQKLFDGMLVRSAITWTSL 130
           L+ G++VH +++K+G ++DT   N L+++YAK   +R+ V A + F  +  +  ++W S+
Sbjct: 191 LQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSSIRCKDVVSWNSV 250

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE-DRIFGEQIHAFAIKSG 189
           I GY+++  +   L +   M       N  T + IL  CS  E  R  G+++H+F ++ G
Sbjct: 251 IAGYIENQLFGEALALFSQMISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSFVVRHG 310

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E +V V  +L++ Y      ++ E++F  +  +D+   N +I  Y   G    A  +F 
Sbjct: 311 MEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRALGLFQ 370

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            LLS+   P+  +F ++++ C +   V+ G ++HG   +  V++E S+ NA+VT Y    
Sbjct: 371 GLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHCD 430

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI--C-CDSSCLAT 366
             ++A R F  I  ++ ISW A++S    S    +     +  +  G+  C  DS  +  
Sbjct: 431 RFDDAFRAFTDILNKDSISWNAILSACATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVLN 490

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           VI   + C  +++  + HG++++ GY  +  +  A++D Y K G    A +L    + + 
Sbjct: 491 VIHMSTFC-GIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHAGRN 549

Query: 427 TAEFNAILSGFMEKIADDEEDVMV-----------------------------LFSQQRL 457
               N ++S +++    ++ +V+                              LF+  + 
Sbjct: 550 IVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQS 609

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
            G++PD V+ + +L        +   R  HAY ++     D+ +  AL+  Y+KCG+I  
Sbjct: 610 EGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRASLE-DIHLEGALVDAYSKCGNITN 668

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A+ IF+    +D+V++ AM+  YA+HG+ + A+ LF +M +    PD + +  +L AC +
Sbjct: 669 AYNIFQISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLLSACSH 728

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA-MNLINSSPFSESPLLW 636
           +GL + GI +F  I +I+ + P  EH+ACMVDLL R+G + +A M  ++  P + +   W
Sbjct: 729 AGLVDAGIKIFKSIREIHRVVPTAEHYACMVDLLARSGHIQDAYMFALDMPPHAVNANAW 788

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
            +L+   K+    +   LA+ RL  +E  D G+++++SN+YA     D    VR  M  +
Sbjct: 789 SSLLGACKVHGKVEIGQLAAGRLFSMEGGDIGNYVIMSNIYAADEKWDGVENVRKLMKSI 848

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            + K AGCSWIE++   H F+AS  +H +   IY  L  L  ++K
Sbjct: 849 DMKKPAGCSWIEVEKTRHLFIASDINHQDRSCIYDMLGSLYQQIK 893



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 175/684 (25%), Positives = 307/684 (44%), Gaps = 76/684 (11%)

Query: 70  GSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           GSG   L + +H   +K+G   +    A  +++ Y +F  L  A  LFD M    A+ W 
Sbjct: 83  GSGS-ALARCLHGLAVKAGRVASSATVAKAVMDAYGRFGSLADALLLFDEMARPDAVCWN 141

Query: 129 SLIKGYLDDGDYESVLGIACDMYRS-------EEKFNEHTCSVILEACSLLEDRIFGEQI 181
            LI      G +E     A  ++RS       +      T +VI+ AC+       G  +
Sbjct: 142 ILITACSRRGLFED----AFILFRSMLSCGVGQGMPTAVTVAVIVPACAKWRHLQTGRSV 197

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFR---EAENVFRGLAYKDVRCVNFMILEYNKA 238
           H + +K+G E++   G +L+SMY   G  R   +A   F  +  KDV   N +I  Y + 
Sbjct: 198 HCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSSIRCKDVVSWNSVIAGYIEN 257

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVC-YENLGVEEGKQLHGLAVKFGVVREISV 297
                A  +F  ++S  + PN  T  +++ VC +   G   GK++H   V+ G+  ++SV
Sbjct: 258 QLFGEALALFSQMISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSFVVRHGMEIDVSV 317

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA++T Y K    ++ E +F ++  R+++SW  +I+GYV +G+  +A+  F   L  GI
Sbjct: 318 SNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRALGLFQGLLSTGI 377

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             DS    +++  C+   +++ G+++HG+  +   L +  L  ALV  Y+       A  
Sbjct: 378 APDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHCDRFDDAFR 437

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDV---MVLFSQ--QRLAGMEPDPVTFSRLLS 472
                  K +  +NAILS      A  E+ +    VL S+  + +   + D VT   ++ 
Sbjct: 438 AFTDILNKDSISWNAILSA----CATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVLNVIH 493

Query: 473 LSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCG------------------ 513
           +S    C ++  R  H +S++ GY  +  V NA++  Y KCG                  
Sbjct: 494 MST--FCGIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHAGRNIV 551

Query: 514 -------------SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
                         I+ A  IF  ++++D+ SWN M+  YA + +   A  LF  ++ EG
Sbjct: 552 TDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQSEG 611

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQI--YGLRPILEHF---ACMVDLLGRAG 615
             PD +SI  +L+ACI+       +C    + Q   Y LR  LE       +VD   + G
Sbjct: 612 LKPDIVSIANILEACIH-------LCSVQLVRQCHAYMLRASLEDIHLEGALVDAYSKCG 664

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKL--MANSKFSILASKRLLDLEPKDAGSFILV 673
            ++ A N+   SP  +  + +  ++    +  MA     + +    LD+ P       L+
Sbjct: 665 NITNAYNIFQISP-KKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLL 723

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLR 697
           S   +  G++D   K+  ++ ++ 
Sbjct: 724 SAC-SHAGLVDAGIKIFKSIREIH 746


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 183/585 (31%), Positives = 310/585 (52%), Gaps = 9/585 (1%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR--EAENVFR 218
           T + +L+ C+   D   G  +HA     G        T+L +MY  + C R  +A  VF 
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMY--AKCRRPGDARRVFD 284

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE-PNDYTFTNVISVCYENLGVE 277
            +  +D    N ++  Y + G +E A  + V +   D E P+  T  +V+  C +   + 
Sbjct: 285 RMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALG 344

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
             +++H  AV+ G   +++V  AI+ +Y K G  + A ++FD + +RN +SW A+I GY 
Sbjct: 345 ACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYA 404

Query: 338 RSGHGGKAINGFLEFLDLGI-CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            +G   +A+  F   +  G+   D S LA  +  C     L+ G ++H   ++ G  S+V
Sbjct: 405 ENGDATEALALFKRMVGEGVDVTDVSVLAA-LHACGELGFLDEGRRVHELLVRIGLESNV 463

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  AL+ +Y K      A  + D    K    +NA++ G  +      ED + LFS+ +
Sbjct: 464 NVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQN--GSSEDAVRLFSRMQ 521

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           L  ++PD  T   ++   A  +  ++ R +H YSI+     DV V  ALI MYAKCG + 
Sbjct: 522 LENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVS 581

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A  +F    DR +++WNAM+  Y  HG GK A+ LFEEMK  G  P++ + L VL AC 
Sbjct: 582 IARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACS 641

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
           ++GL + G   F+ +++ YGL P +EH+  MVDLLGRAG+L EA + I   P      ++
Sbjct: 642 HAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVY 701

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             ++   KL  N + +  +++R+ +LEP++    +L++N+YA   +  + A+VRT M   
Sbjct: 702 GAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKK 761

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            L K  G S +++ +++H F +   +H ++++IY++L  L +E+K
Sbjct: 762 GLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIK 806



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 258/533 (48%), Gaps = 18/533 (3%)

Query: 57  LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           +   +  L+K+     DL  G+AVHA L   G   +   A  L N+YAK  R   A+++F
Sbjct: 224 VLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVF 283

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDR 175
           D M  R  + W +L+ GY  +G  E+ +G+   M   + E+ +  T   +L AC+  +  
Sbjct: 284 DRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQAL 343

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
               ++HAFA++ GF+  V V T+++ +Y   G    A  VF G+  ++    N MI  Y
Sbjct: 344 GACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGY 403

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G++  A  +F  ++    +  D +    +  C E   ++EG+++H L V+ G+   +
Sbjct: 404 AENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNV 463

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           +V NA++TMY K   ++ A ++FD +  +  +SW A+I G  ++G    A+  F      
Sbjct: 464 NVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLE 523

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            +  DS  L ++I   +  S+      +HG++I+     DV + TAL+D+YAK G +  A
Sbjct: 524 NVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIA 583

Query: 416 RMLLDGFSCKYTAEFNAILSGFME----KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           R L +    ++   +NA++ G+      K+A +      LF + + +G  P+  TF  +L
Sbjct: 584 RSLFNSARDRHVITWNAMIHGYGSHGSGKVAVE------LFEEMKSSGKVPNETTFLSVL 637

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DR 528
           S + S A LV     +  S+K  Y  +  + +   ++ +  + G +  A+   + +  + 
Sbjct: 638 S-ACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEP 696

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
            I  + AML A  LH   K   L  E  +R      +  +  VL A IY+  S
Sbjct: 697 GISVYGAMLGACKLH---KNVELAEESAQRIFELEPEEGVYHVLLANIYANAS 746



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 1/119 (0%)

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G  P   TF+ LL L A++A L  GR++HA     G + + +   AL  MYAKC     
Sbjct: 219 SGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGD 278

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE-GFAPDDISILGVLQAC 575
           A ++F  +  RD V+WNA+++ YA +GL + A+ +   M+ E G  PD ++++ VL AC
Sbjct: 279 ARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPAC 337


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 198/662 (29%), Positives = 335/662 (50%), Gaps = 18/662 (2%)

Query: 86  KSGSQNDTFEANNLINLYAKF--NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           KSGS   T   N L+  Y++   + L  A+++FD +  R  ++W +L+      G +   
Sbjct: 19  KSGSCATT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEA 77

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
             +   M+      N       L + ++      G Q+ + A+KSG  NNVF  ++L+ +
Sbjct: 78  WRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDV 137

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y   G  R+A  VF G+  ++    N +I  Y ++G+   A  +F+ +      P++ TF
Sbjct: 138 YAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATF 197

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
            ++++   E        QLHG  VK+G    ++V NA +T Y + G  +++ R+FD I +
Sbjct: 198 ASLLTAV-EGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGD 256

Query: 324 -RNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSNLE-LG 380
            R+LISW A++  Y  +G   +A+  F+  + + G+  D     ++I  CS   + +  G
Sbjct: 257 IRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQG 316

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC------KYTAEFNAIL 434
             +HG  IK        +  AL+ +Y +        M+ D + C      K T  +N++L
Sbjct: 317 RVIHGLVIKSALEGVTPVCNALIAMYTR---YNENCMMEDAYKCFNSLVLKDTVSWNSML 373

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G+ +       D +  F       +  D   FS  L  S+  A L  G+ +H   I +G
Sbjct: 374 TGYSQH--GLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSG 431

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           +A++  V ++LI MY+K G ID A + F+       V WNAM+  YA HG  +   +LF 
Sbjct: 432 FASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFN 491

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           EM +     D I+ +G++ +C ++GL + G  + N +E  YG+   +EH+AC VDL GRA
Sbjct: 492 EMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRA 551

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G+L +A  LI+S PF    ++W TL+   ++  N + +   +  L   EP+   +++L+S
Sbjct: 552 GQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLS 611

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           +MY+G GM  + A V+  M    LSK  G SWIE+ +++H F A  K HP+ +EIY  L 
Sbjct: 612 SMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLR 671

Query: 735 LL 736
           +L
Sbjct: 672 VL 673



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 247/485 (50%), Gaps = 27/485 (5%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +G  + +  LKSG  N+ F A+ L+++YAK  R+  A+++FDGM  R+ ++W +LI GY 
Sbjct: 111 IGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYT 170

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEA-----CSLLEDRIFGEQIHAFAIKSGF 190
           + GD  S L +  +M R     +E T + +L A     C L+       Q+H   +K G 
Sbjct: 171 ESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM------HQLHGKIVKYGS 224

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFHVFV 249
              + V  + I+ Y   G  +++  +F G+   +D+   N M+  Y   G  + A   FV
Sbjct: 225 ALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFV 284

Query: 250 HLLS-SDFEPNDYTFTNVISVCYEN-LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
            ++  S   P+ Y+FT++IS C E+     +G+ +HGL +K  +     V NA++ MY +
Sbjct: 285 RMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR 344

Query: 308 HG---MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           +    M E+A + F+++  ++ +SW ++++GY + G    A+  F       +  D    
Sbjct: 345 YNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAF 404

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           +  +   S  + L+LG Q+HG  I  G+ S+  + ++L+ +Y+K G +  AR   +    
Sbjct: 405 SAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK 464

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVR 482
             +  +NA++ G+ +      E+V +LF++  QR A +  D +TF  L++ S S A LV 
Sbjct: 465 SSSVPWNAMIFGYAQH--GQAENVDILFNEMLQRKAPL--DHITFVGLIT-SCSHAGLVD 519

Query: 483 GRSLHAYSIKTGYAADVIVGNAL--ITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
             S    +++T Y   + + +    + +Y + G +D A ++   +  + D + W  +L A
Sbjct: 520 EGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGA 579

Query: 540 YALHG 544
             +HG
Sbjct: 580 CRIHG 584



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG+ +H  ++ SG  ++ F +++LI +Y+K   +D A+K F+     S++ W ++I G
Sbjct: 417 LQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFG 476

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGF 190
           Y   G  E+V  +  +M + +   +  T   ++ +CS   L+++    E ++    K G 
Sbjct: 477 YAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEG--SEILNTMETKYGV 534

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK-AGESEMAFHVFV 249
              +      + +Y  +G   +A+ +   + ++    V   +L   +  G  E+A  V  
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGV 276
           HL  +  EP  ++   ++S  Y  LG+
Sbjct: 595 HLFVA--EPRQHSTYVLLSSMYSGLGM 619


>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 216/743 (29%), Positives = 347/743 (46%), Gaps = 110/743 (14%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLY---AKFNRLDVAQKLFDGML 120
           L+K     G +  G  +HA L+K+G  +  + A  L+ LY    KF  +D   K FDG  
Sbjct: 27  LLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDG-- 84

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               +    +I  Y+  G+                               L++ R+  ++
Sbjct: 85  -SDLVVSNCMISAYVQWGN-------------------------------LVQARLLFDE 112

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +         E N    ++LIS     G   E+   F    +++V      I  + + G 
Sbjct: 113 MP--------ERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGL 164

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +  A  +F  LL S   PND TFT+V+  C E      G  + GL VK G    +SV N+
Sbjct: 165 NFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNS 224

Query: 301 IVTM-------------------------------YGKHGMSEEAERMFDAISERNLISW 329
           ++T+                               Y + G   EA R+FD + ERN ISW
Sbjct: 225 LITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISW 284

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           +A+I+ Y +SG+  +A+  F + +  G   + SC A  +   +    L  G+ +HG   K
Sbjct: 285 SAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTK 344

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLD---------------GFSC---------- 424
            G   DV +G++L+D+Y K G     R++ D               G+S           
Sbjct: 345 IGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEEL 404

Query: 425 ------KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                 K    +  IJ+G++E   +  E V+ +F+   ++G  P+  TFS +L   AS A
Sbjct: 405 FELIPEKNDXSWGTIJAGYLEN--EQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIA 462

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L +G ++H   IK G   D+ VG AL  MYAKCG I  + Q+F+ + +++ +SW  M+ 
Sbjct: 463 SLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQ 522

Query: 539 AYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             A  G    +L+LFEEM+R    AP+++ +L VL AC + GL + G+  FN +E++YG+
Sbjct: 523 GLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGI 582

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
           +P  +H+ C+VDLL R+GRL EA   I + PF      W  L+S  K   + K +   +K
Sbjct: 583 KPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAK 642

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +L  L   ++  ++L+SN+YA  G   + + +R  M +  L K  GCSW+E+ +++H F 
Sbjct: 643 KLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFY 702

Query: 718 ASGKDHPESEEIYSKLDLLNDEM 740
           +    H +S+EIY  L LL  EM
Sbjct: 703 SEDGSHSQSDEIYGTLQLLRSEM 725


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 200/667 (29%), Positives = 338/667 (50%), Gaps = 18/667 (2%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           HA LLKSG    T   N L+  Y++ +   L  A+++FD +  R  ++W +L+  +   G
Sbjct: 14  HASLLKSGFAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASG 72

Query: 139 DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
            +     +   M+      N       L + ++      G Q+ + A+KSG  NNVF  +
Sbjct: 73  AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +L+ +Y   G  R+A  VF G+  ++    N +I  Y ++G+   A  +F+ +      P
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVP 192

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           ++ TF ++++   E        QLHG  VK+G    ++V NA +T Y + G  +++ R+F
Sbjct: 193 DEATFASLLTAV-EGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIF 251

Query: 319 DAISE-RNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSN 376
           D I + R+LISW A++  Y  +G   +A+  F+  + + G+  D     ++I  CS   +
Sbjct: 252 DGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGH 311

Query: 377 LE-LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC------KYTAE 429
            +  G  +HG  IK        +  AL+ +Y +        M+ D + C      K T  
Sbjct: 312 DDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR---YNENCMMEDAYKCFNSLVLKDTVS 368

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N++L+G+ +       D +  F       +  D   FS  L  S+  A L  G+ +H  
Sbjct: 369 WNSMLTGYSQH--GLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGL 426

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            I +G+A++  V ++LI MY+K G ID A + F+       V WNAM+  YA HG  +  
Sbjct: 427 VIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENV 486

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
            +LF EM +     D I+ +G++ +C ++GL + G  + N +E  YG+   +EH+AC VD
Sbjct: 487 DILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVD 546

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           L GRAG+L +A  LI+S PF    ++W TL+   ++  N + +   +  L   EP+   +
Sbjct: 547 LYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHST 606

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++L+S+MY+G GM  + A V+  M    LSK  G S IE+ +++H F A  K HP+ +EI
Sbjct: 607 YVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLIEVKNEVHSFNAEDKSHPKMDEI 666

Query: 730 YSKLDLL 736
           Y  L +L
Sbjct: 667 YEMLRVL 673



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 247/485 (50%), Gaps = 27/485 (5%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +G  + +  LKSG  N+ F A+ L+++YAK  R+  A+++FDGM  R+ ++W +LI GY 
Sbjct: 111 IGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYT 170

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEA-----CSLLEDRIFGEQIHAFAIKSGF 190
           + GD  S L +  +M R     +E T + +L A     C L+       Q+H   +K G 
Sbjct: 171 ESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLM------HQLHGKIVKYGS 224

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFHVFV 249
              + V  + I+ Y   G  +++  +F G+   +D+   N M+  Y   G  + A   FV
Sbjct: 225 ALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFV 284

Query: 250 HLLS-SDFEPNDYTFTNVISVCYEN-LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
            ++  S   P+ Y+FT++IS C E+     +G+ +HGL +K  +     V NA++ MY +
Sbjct: 285 RMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR 344

Query: 308 HG---MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           +    M E+A + F+++  ++ +SW ++++GY + G    A+  F       +  D    
Sbjct: 345 YNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAF 404

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           +  +   S  + L+LG Q+HG  I  G+ S+  + ++L+ +Y+K G +  AR   +    
Sbjct: 405 SAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK 464

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVR 482
             +  +NA++ G+ +      E+V +LF++  QR A +  D +TF  L++ S S A LV 
Sbjct: 465 SSSVPWNAMIFGYAQH--GQAENVDILFNEMLQRKAPL--DHITFVGLIT-SCSHAGLVD 519

Query: 483 GRSLHAYSIKTGYAADVIVGNAL--ITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
             S    +++T Y   + + +    + +Y + G +D A ++   +  + D + W  +L A
Sbjct: 520 EGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGA 579

Query: 540 YALHG 544
             +HG
Sbjct: 580 CRIHG 584



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG+ +H  ++ SG  ++ F +++LI +Y+K   +D A+K F+     S++ W ++I G
Sbjct: 417 LQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFG 476

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGF 190
           Y   G  E+V  +  +M + +   +  T   ++ +CS   L+++    E ++    K G 
Sbjct: 477 YAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEG--SEILNTMETKYGV 534

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK-AGESEMAFHVFV 249
              +      + +Y  +G   +A+ +   + ++    V   +L   +  G  E+A  V  
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGV 276
           HL  +  EP  ++   ++S  Y  LG+
Sbjct: 595 HLFVA--EPRQHSTYVLLSSMYSGLGM 619


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 189/578 (32%), Positives = 315/578 (54%), Gaps = 9/578 (1%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +I + A+K GF +++  G  LI  Y   G    A  VF  + ++ +   N MI  Y + G
Sbjct: 98  KIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNG 155

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGV-VREISV 297
            S+ A  ++  ++     P+++TF++V    + +LG V EG++ HG +V  GV V  + V
Sbjct: 156 RSKEAIDIYQRMVPDGILPDEFTFSSVFK-AFSDLGLVHEGQRAHGQSVVLGVGVSNVFV 214

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G+A+V MY K G   +A  + D +  ++++ +TALI GY   G  G+++  F      GI
Sbjct: 215 GSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGI 274

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +   L++V+  C    +L  G  +HG  +K G  S V   T+L+ +Y + G +  +  
Sbjct: 275 EANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLK 334

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +   F       + +++ G ++     EE  ++ F Q   + + P+  T S +L   +S 
Sbjct: 335 VFKQFINPNQVTWTSVIVGLVQN--GREEIALLKFRQMLRSSITPNSFTLSSVLRACSSL 392

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L +G+ +HA  +K G   D  VG ALI  Y KCGS + A  +F G+ + D+VS N+M+
Sbjct: 393 AMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMI 452

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            +YA +G G  AL LF  MK  G  P++++ LGVL AC  +GL E G  +F+       +
Sbjct: 453 YSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNI 512

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
               +H+ACMVDLLGRAGRL EA  LIN    S+  ++WRTL+S  ++  + + +     
Sbjct: 513 ELTKDHYACMVDLLGRAGRLKEAEMLINQVNISD-VVIWRTLLSACRIHGDVEMAKRVMN 571

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           R++DL P+D G+ +L+SN+YA  G   +  ++++ M ++RL K    SW++++ ++H F+
Sbjct: 572 RVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFM 631

Query: 718 ASGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
           A    HP   +I  KL+ L +++K L     + F LQD
Sbjct: 632 AGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQD 669



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 236/493 (47%), Gaps = 20/493 (4%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  L++  IG   +     + +  LK G  +     N LI+ Y K   +  A+K+FD + 
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 137

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  + W S+I  Y+ +G  +  + I   M       +E T S + +A S L     G++
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197

Query: 181 IHAFAIKSGFE-NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            H  ++  G   +NVFVG++L+ MY   G  R+A  V   +  KDV     +I+ Y+  G
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 257

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           E   +  VF ++     E N+YT ++V+  C     +  G+ +HGL VK G+   ++   
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQT 317

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +++TMY + G+ +++ ++F      N ++WT++I G V++G    A+  F + L   I  
Sbjct: 318 SLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITP 377

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +S  L++V+  CS  + LE G Q+H   +K G   D  +G AL+D Y K G  + AR + 
Sbjct: 378 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 437

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +G         N+++  + +     E   + LFS  +  G+EP+ VT+  +LS   +   
Sbjct: 438 NGLLEVDVVSVNSMIYSYAQNGFGHE--ALQLFSGMKDTGLEPNNVTWLGVLSACNNAGL 495

Query: 480 LVRGRSLHAYSIKTG--------YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           L  G  + + +  +G        YA        ++ +  + G +  A  +   ++  D+V
Sbjct: 496 LEEGCHIFSSARNSGNIELTKDHYA-------CMVDLLGRAGRLKEAEMLINQVNISDVV 548

Query: 532 SWNAMLSAYALHG 544
            W  +LSA  +HG
Sbjct: 549 IWRTLLSACRIHG 561


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 184/588 (31%), Positives = 299/588 (50%), Gaps = 6/588 (1%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
           H+   + EAC  L     G  IH    ++    +  +   L+ MY   G   + + VF  
Sbjct: 88  HSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDE 147

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +  K++     +I  Y K GE E A  +F  + +S   PN   + +++  C     +E G
Sbjct: 148 MLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELG 207

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           KQ+H   ++  +   I+V  AI  MY + G  E A+ +FD +  +N ++WT L+ GY ++
Sbjct: 208 KQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQA 267

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
                A+  F      G+  D    + V+  C    + ++G Q+H   +K G  S+V +G
Sbjct: 268 KKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVG 327

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           T LVD Y K GD++SA       S      ++A++SGF +  +   ED + +F+  R  G
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ--SGRLEDCIKIFTSLRSEG 385

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           +  +   ++ +    A+QA L  G   H  +IK G  + +   +A++TMY+KCG +D A 
Sbjct: 386 VVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYAR 445

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           + F+ I + D V+W A++S YA HG    AL  F  M+  G  P+ ++ + VL AC +SG
Sbjct: 446 RAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSG 505

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           L          + + YG++P ++H+ CM+D   RAG L EA+ LIN  PF    + W++L
Sbjct: 506 LVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSL 565

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           +       + K   +A++ L  L+P D   +IL+ N+Y+  G  +EA  VR  M +  L 
Sbjct: 566 LGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELK 625

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDS 747
           KE  CSWI +  ++H FV   + HP++E IYSKL    +E K  V DS
Sbjct: 626 KEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKL----EEFKCSVIDS 669



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 232/476 (48%), Gaps = 18/476 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +H  L ++         N L+ +Y         QK+FD ML+++ ++W  +I  Y  
Sbjct: 106 GRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAK 165

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIFGEQIHAFAIKSGFENN 193
           +G+ E  + +  DM  S  + N      +L++C   S LE    G+QIH+  I++    N
Sbjct: 166 NGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLE---LGKQIHSHVIRAQLNAN 222

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + V T++ +MY   G    A+ VF G+  ++      +++ Y +A + E+A  +F  +  
Sbjct: 223 ITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAM 282

Query: 254 SDFEPNDYTFTNVISVCYENLGVEE---GKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
              E +++ F+ V+ VC    G+E+   G+Q+H   VK G   E+SVG  +V  Y K G 
Sbjct: 283 EGVELDEFVFSIVLKVC---CGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGD 339

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A R F  ISE N +SW+ALISG+ +SG     I  F      G+  +S    +V   
Sbjct: 340 IESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQA 399

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+  +NL +G Q HG AIK G +S +   +A+V +Y+K G L  AR   +         +
Sbjct: 400 CAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAW 459

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
            AI+SG+      +  + +  F + +  G+ P+ VTF  +L+ + S + LV     +  S
Sbjct: 460 TAIISGY--AYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLT-ACSHSGLVAEAKQYLGS 516

Query: 491 IKTGYAADVIVG--NALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           +   Y     +   + +I  Y++ G +  A ++   +  + D +SW ++L     H
Sbjct: 517 MSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAH 572



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 176/358 (49%), Gaps = 1/358 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++  +G   L+LG+ +H+ ++++    +      + N+Y +   L+ A+ +FDGM  ++
Sbjct: 194 LLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQN 253

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           A+TWT L+ GY      E  L +   M     + +E   S++L+ C  LED   G QIH+
Sbjct: 254 AVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHS 313

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G E+ V VGT L+  Y   G    A   F  ++  +    + +I  ++++G  E 
Sbjct: 314 HIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLED 373

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +F  L S     N + +T+V   C     +  G Q HG A+K G+V  +   +A+VT
Sbjct: 374 CIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVT 433

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  + A R F++I E + ++WTA+ISGY   G+  +A+  F      G+  ++  
Sbjct: 434 MYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVT 493

Query: 364 LATVIDGCSVCSNLELGLQLHG-FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              V+  CS    +    Q  G  +  +G    +     ++D Y++ G L+ A  L++
Sbjct: 494 FIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELIN 551


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 182/554 (32%), Positives = 289/554 (52%), Gaps = 5/554 (0%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA--YKDVRCVNFMILEYNK 237
           QIH+  I +   +  F+  +L+++Y   G   +   +F       K+V     +I +  +
Sbjct: 48  QIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTR 107

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
                 A   F H+  S   PN YTF+ V+S C +      G+Q+H L  K G + E+ V
Sbjct: 108 FKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFV 167

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            +A+V MY K      AE++F+ +  RNL+SW  +I G++++    +AI  F   L   +
Sbjct: 168 VSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENL 227

Query: 358 CC-DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
              D    ++V   C+   NLE G Q+HG A+K G  + V +  +L D+Y K G      
Sbjct: 228 TALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVA 287

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            L      +    +N ++  ++     + ED    F   R  G  PD  ++S +L   A+
Sbjct: 288 KLFSNTGARDVVTWNIMIMAYV--YNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCAN 345

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
            A L +G  +H   I++G+  ++ V ++LITMYAKCGS+  AFQIF+   DR++V W A+
Sbjct: 346 LAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAI 405

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++A   HG     + LFE+M REG  PD I+ + VL AC ++G  E G   FN + +++G
Sbjct: 406 IAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHG 465

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P  EH+AC+VDLL RAG L  A   I   P      +W  L+S  +  +N       +
Sbjct: 466 IYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVA 525

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
            +L DLEP + G+++L+ N+    GML+EA +VR  M  + + KE GCSWI+I +  + F
Sbjct: 526 LKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVF 585

Query: 717 VASGKDHPESEEIY 730
               K H +++EIY
Sbjct: 586 TVHDKSHEKTKEIY 599



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 233/498 (46%), Gaps = 29/498 (5%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML--VRSAITWTSLIK 132
           K    +H+ L+ +   +  F  NNL+NLYAK   +D    LF       ++ ++WTSLI 
Sbjct: 44  KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLIT 103

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
                      L     M RS    N +T S +L AC+     + GEQ+H+   K GF  
Sbjct: 104 QLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLA 163

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            VFV ++L+ MY        AE VF  +  +++   N MI+ + +    + A   F  LL
Sbjct: 164 EVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLL 223

Query: 253 SSDFEP-NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             +    ++ +F++V S C     +E GKQ+HG+A+K GV   + + N++  MYGK G+ 
Sbjct: 224 LENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLF 283

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +  ++F     R++++W  +I  YV + +   A N F      G   D +  ++V+  C
Sbjct: 284 NDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSC 343

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  + L  G  +H   I+ G++ ++R+ ++L+ +YAK G L  A  + +    +    + 
Sbjct: 344 ANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWT 403

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS------ 485
           AI++   +        V+ LF Q    G++PD +TF  +LS     AC   GR       
Sbjct: 404 AIIAACQQH--GHANWVVELFEQMLREGIKPDYITFVSVLS-----ACSHTGRVEEGFFY 456

Query: 486 ----LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAY 540
               +  + I  G+     +    + + ++ G +D A +  + +  + D   W A+LSA 
Sbjct: 457 FNSMIKVHGIYPGHEHYACI----VDLLSRAGELDRAKRFIELMPIKPDASVWGALLSAC 512

Query: 541 ALHG---LGKG-ALLLFE 554
             H    +GK  AL LF+
Sbjct: 513 RNHSNLIMGKEVALKLFD 530



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 16/295 (5%)

Query: 54  RTLLFNDWPQLVKISIGS--------GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK 105
           +TLL  +   L ++S  S        G+L+ G+ VH   LK G  N  +  N+L ++Y K
Sbjct: 220 KTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGK 279

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
               +   KLF     R  +TW  +I  Y+ + +YE        M R     +E + S +
Sbjct: 280 CGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSV 339

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L +C+ L     G  IH   I+SGF  N+ V +SLI+MY   G   +A  +F     ++V
Sbjct: 340 LHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNV 399

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
            C   +I    + G +     +F  +L    +P+  TF +V+S C     VEEG      
Sbjct: 400 VCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNS 459

Query: 286 AVKFGVVREISVGN----AIVTMYGKHGMSEEAERMFDAISERNLIS-WTALISG 335
            +K   V  I  G+     IV +  + G  + A+R  + +  +   S W AL+S 
Sbjct: 460 MIK---VHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSA 511


>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
          Length = 629

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 168/520 (32%), Positives = 288/520 (55%), Gaps = 11/520 (2%)

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           +V   N +I  +   G  E  F  +  + +    P+ +TF   I  C   L V E K++H
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKAC---LDVLEIKKIH 159

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           GL  KFG+  ++ +G+A+V  Y K G+ E A+  F+ +  R+++ W A+++GY + G   
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFE 219

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
             +  F    D  +      +   +   +V  +L  G  +HGFA+K GY S V +  +L+
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D+Y K   ++ A  + +    K    +N+I+S  + +   D +  + L  +   AG++PD
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVS--VHEQCGDHDGTLRLLDRMLGAGIQPD 337

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD------VIVGNALITMYAKCGSIDG 517
            VT + +L   +  A L+ GR +H Y I +G   D      V++ NA+I MYAKCGS+  
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F+ +S++D+ SWN M+  Y +HG G  AL +F  M      PD+++ +GVL AC +
Sbjct: 398 AHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSH 457

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           +G    G     +++  Y + P +EH+ C++D+LGRAG+L EA  L  + P   +P++WR
Sbjct: 458 AGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWR 517

Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
            L++  +L  ++  + +A++R+ +LEP+  GS++L+SN+Y   G  +E  +VR TM    
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQN 577

Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           + K  GCSWIE+ + +H FV++ + HPE+  IY+ L+ L 
Sbjct: 578 VRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLT 617



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 209/431 (48%), Gaps = 17/431 (3%)

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC-SLLEDRIFGEQI 181
           +   + ++I G++ +G  E        M       ++ T    ++AC  +LE +    +I
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK----KI 158

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H    K G E +VF+G++L++ Y   G    A+  F  L  +DV   N M+  Y + G+ 
Sbjct: 159 HGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQF 218

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           EM    F  +      P+ +T T  +SV      +  G+ +HG A+K G    ++V N++
Sbjct: 219 EMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSL 278

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MYGK    E+A  +F+ + E+++ SW +++S + + G     +      L  GI  D 
Sbjct: 279 IDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDL 338

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGY------LSDVRLGTALVDIYAKGGDLKSA 415
             + TV+  CS  + L  G ++HG+ I  G       + DV L  A++D+YAK G ++ A
Sbjct: 339 VTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDA 398

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
            ++ +  S K  A +N ++ G+      +E   + +FS+     ++PD VTF  +LS  +
Sbjct: 399 HLVFERMSNKDVASWNIMIMGYGMHGYGNE--ALEMFSRMCEVQLKPDEVTFVGVLSACS 456

Query: 476 SQACLVRGRSLHAYSIKTGY--AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVS 532
               + +GR+     +K+ Y  A  +     +I M  + G +D A+++   +  + + V 
Sbjct: 457 HAGFVSQGRNF-LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVV 515

Query: 533 WNAMLSAYALH 543
           W A+L+A  LH
Sbjct: 516 WRALLAACRLH 526



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 179/394 (45%), Gaps = 12/394 (3%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +H  L K G + D F  + L+N Y KF  ++ AQ  F+ + +R  + W +++ GY   
Sbjct: 156 KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQI 215

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G +E VL     M       +  T +  L   +++ D   G  IH FA+K G+++ V V 
Sbjct: 216 GQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVS 275

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            SLI MY    C  +A  +F  +  KD+   N ++  + + G+ +    +   +L +  +
Sbjct: 276 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQ 335

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV------VREISVGNAIVTMYGKHGMS 311
           P+  T T V+  C     +  G+++HG  +  G+      + ++ + NA++ MY K G  
Sbjct: 336 PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSM 395

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +A  +F+ +S +++ SW  +I GY   G+G +A+  F    ++ +  D      V+  C
Sbjct: 396 RDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455

Query: 372 SVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           S    +  G   L     K+     +   T ++D+  + G L  A  L    +     E 
Sbjct: 456 SHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYEL----ALTMPIEA 511

Query: 431 NAIL-SGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           N ++    +      +  V+   + QR+  +EP+
Sbjct: 512 NPVVWRALLAACRLHKHAVLAEVAAQRVFELEPE 545



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 8/271 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL  G+ +H F +K G  +    +N+LI++Y K   ++ A ++F+ M  +   +W S++
Sbjct: 251 GDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIV 310

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             +   GD++  L +   M  +  + +  T + +L ACS L   + G +IH + I SG  
Sbjct: 311 SVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG 370

Query: 192 ------NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
                 ++V +  ++I MY   G  R+A  VF  ++ KDV   N MI+ Y   G    A 
Sbjct: 371 KDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEAL 430

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTM 304
            +F  +     +P++ TF  V+S C     V +G+  L  +  K+ V   I     ++ M
Sbjct: 431 EMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDM 490

Query: 305 YGKHGMSEEA-ERMFDAISERNLISWTALIS 334
            G+ G  +EA E       E N + W AL++
Sbjct: 491 LGRAGQLDEAYELALTMPIEANPVVWRALLA 521


>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
          Length = 726

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 205/683 (30%), Positives = 338/683 (49%), Gaps = 21/683 (3%)

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           A+HA  + +G        N+L   YAK      A  +F     R   ++ +++  + D  
Sbjct: 53  ALHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPA 112

Query: 139 DYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           +    L  A  M RS   + +  TC+V L   +   +     Q+HA A +SG   +VFVG
Sbjct: 113 E---ALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVG 169

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVFVHLL-SSD 255
            +L++ Y   G   EA +VF  +  +D+   N +I    + G+       VF+ +L   D
Sbjct: 170 NALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGD 229

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P+  +  +VI  C     +E G+Q+HG AVK GV   +S+GN +V MY K G    A 
Sbjct: 230 VQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSAR 289

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           R+FDA+SER+++SWT  IS       G  A+  F      G+  +      ++       
Sbjct: 290 RLFDAMSERDVVSWTTAISM-----DGEDALTLFNGMRRDGVPPNEVTFVALMSALPADC 344

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
                  +H   +K     +     +L+ +YAK   +  ARM+ D    +    +NA++S
Sbjct: 345 PARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVIS 404

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS--LSASQACLVRGRSLHAYSIKT 493
           G+ +       D + LFS      + P+  TF+ +LS   +     +  G+  H+ ++  
Sbjct: 405 GYAQN--GRCNDALELFSSMARC-LTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSM 461

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+     V  ALI MYAK G+++ + + F     R +++W A++SA A HG     + LF
Sbjct: 462 GFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLF 521

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
            +M R G APD + +L VL AC Y G+ + G  +F+ +    G+    EH++C+VD+LGR
Sbjct: 522 GDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPEHYSCVVDMLGR 581

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
           AGRL+EA  L+   P   S    ++L+   ++  +++     ++ L + EP ++G+++L+
Sbjct: 582 AGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGERIARILTEKEPTESGAYVLL 641

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS----KLHHFVASGKDHPESEEI 729
           SN+YA  G  D  AKVR  M D  + KE G SW++  +     LH F +    HP +EEI
Sbjct: 642 SNIYADVGDWDGVAKVRRKMRDRGVKKEIGFSWVDAGAGEALHLHKFSSDDTTHPRTEEI 701

Query: 730 YSKLDLLNDEMKLKVKDSSAFEL 752
           Y+  D+L  EMK  +K+ S  E+
Sbjct: 702 YAVADVLGWEMKF-LKNCSQMEM 723



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 190/413 (46%), Gaps = 14/413 (3%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           + ++ G G+  L + +HA   +SG   D F  N L+  Y++   L  A+ +FD M  R  
Sbjct: 138 LSLAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDL 197

Query: 125 ITWTSLIKGYLDDGDYES-VLGIACDMYRSEEKFNEH--TCSVILEACSLLEDRIFGEQI 181
           ++W +LI G   DGD  + V+G+   M R  +   +    CSVI  AC        G Q+
Sbjct: 198 VSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVI-PACGGEGKLELGRQV 256

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H FA+K G E  V +G  L++MY+  G    A  +F  ++ +DV      I     + + 
Sbjct: 257 HGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAI-----SMDG 311

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           E A  +F  +      PN+ TF  ++S    +      + +H   +K  V  E +  N++
Sbjct: 312 EDALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSL 371

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           +TMY K    ++A  +FD +  R +I+W A+ISGY ++G    A+  F       +  + 
Sbjct: 372 ITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARC-LTPNE 430

Query: 362 SCLATVIDGCSVCSNLEL--GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +  A+V+   +    + +  G   H  A+  G+     +  AL+D+YAK G+L+ +R   
Sbjct: 431 TTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAF 490

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
                +    + AI+S            VM LF     +G+ PD V    +L+
Sbjct: 491 HETEQRSLIAWTAIISANARH--GSYGAVMSLFGDMARSGVAPDGVVLLAVLT 541



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 4/244 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           Q VHA  LK+    +   +N+LI +YAK  R+D A+ +FD M  R  I W ++I GY  +
Sbjct: 350 QMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQN 409

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE--DRIFGEQIHAFAIKSGFENNVF 195
           G     L +   M R     NE T + +L A + +E     +G+  H+ A+  GF ++ +
Sbjct: 410 GRCNDALELFSSMARCLTP-NETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEY 468

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  +LI MY   G   E+   F     + +     +I    + G       +F  +  S 
Sbjct: 469 VAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSG 528

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
             P+      V++ C     V+ G+ +   +A   GV       + +V M G+ G   EA
Sbjct: 529 VAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEA 588

Query: 315 ERMF 318
           E + 
Sbjct: 589 EELM 592


>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 594

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 177/546 (32%), Positives = 287/546 (52%), Gaps = 4/546 (0%)

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
            T+LI  YF  G  REA N+F  +  +DV     MI+ +        A+ +F  +L S+ 
Sbjct: 46  ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS-EEAE 315
           +PN +T ++V+  C     +  G   H LA K G+ R + V NA++ MY     + ++A 
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F+ I  +  +SWT LI+G+   G G   +  F + L   +  +S   +     C+  S
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +   G Q+H    K+G   D  +  +++D+Y +   L  A+      + K    +N +++
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+      D  + + LF Q    G +P+  TF+ + +  A+ A L  G+ +H   ++ G+
Sbjct: 286 GYERS---DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGF 342

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +V + N+LI MYAKCGSI  + ++F  +  RD+VSW  M+  Y  HG GK A+ LF+E
Sbjct: 343 DKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDE 402

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           M + G  PD I  +GVL  C ++GL + G+  F  + + Y + P  E + C+VDLLGRAG
Sbjct: 403 MVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAG 462

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           R+ EA  L+ + PF     +W  L+   K    S    LA++R+LD  P  AG+++L+S 
Sbjct: 463 RVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSK 522

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +YA +G   E AK+R  M  +   KE G SWIEI ++++ FV   K  P  E ++  +D+
Sbjct: 523 IYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDV 582

Query: 736 LNDEMK 741
           L   MK
Sbjct: 583 LIWHMK 588



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 212/461 (45%), Gaps = 17/461 (3%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           A NLI  Y        A  LF+ +  R  +TWT++I G+     Y     +  +M RSE 
Sbjct: 46  ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS-GCFREAE 214
           + N  T S +L+AC  ++    G   H+ A K G + +V+V  +L+ MY  S     +A 
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
           +VF  +  K       +I  +   G+       F  +L  D  PN ++F+     C    
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
               GKQ+H    K+G+  +  V N+I+ MY +     +A+R F  ++E+NLI+W  LI+
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           GY RS    ++++ F +    G   +     ++   C+  + L  G Q+HG  ++ G+  
Sbjct: 286 GYERS-DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDK 344

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +V L  +L+D+YAK G +  +  L      +    +  ++ G+       E   + LF +
Sbjct: 345 NVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKE--AVKLFDE 402

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRG----RS-LHAYSIKTGYAADVIVGNALITMY 509
              +G++PD + F  +L   +    + +G    RS L  Y+I      D  +   ++ + 
Sbjct: 403 MVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNIN----PDQEIYRCVVDLL 458

Query: 510 AKCGSIDGAFQIFKGIS-DRDIVSWNAML---SAYALHGLG 546
            + G ++ AFQ+ + +  + D   W A+L    AY L  LG
Sbjct: 459 GRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLG 499



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 3/259 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +HA + K G   D    N+++++Y + N L  A++ F  +  ++ ITW +LI GY +
Sbjct: 230 GKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-E 288

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
             D    L +   M     K N  T + I  AC+ L     G+Q+H   ++ GF+ NV +
Sbjct: 289 RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVAL 348

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLI MY   G   ++  +F  +  +D+     M++ Y   G  + A  +F  ++ S  
Sbjct: 349 INSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGI 408

Query: 257 EPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           +P+   F  V+  C     V++G K    +   + +  +  +   +V + G+ G  EEA 
Sbjct: 409 QPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAF 468

Query: 316 RMFDAIS-ERNLISWTALI 333
           ++ + +  E +   W AL+
Sbjct: 469 QLVENMPFEPDESVWGALL 487



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  GQ VH  +++ G   +    N+LI++YAK   +  + KLF  M  R  ++WT+++ G
Sbjct: 327 LSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIG 386

Query: 134 Y 134
           Y
Sbjct: 387 Y 387


>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 180/565 (31%), Positives = 296/565 (52%), Gaps = 12/565 (2%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +++HA  IK    N+++V   LIS +        A NVF  +   +V   N +I  + + 
Sbjct: 40  KEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQN 99

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            +S  AF  F  +  +    +++T+  ++  C     +   + +H    K+G   ++ V 
Sbjct: 100 SQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVP 159

Query: 299 NAIVTMYGKHGM--SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           N+++  Y K G+     A ++F  + E++L+SW ++I G V++G  G+A   F E  +  
Sbjct: 160 NSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAER- 218

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
              D+    T++DG      +     L     +   +S     + +V  Y K GD++ AR
Sbjct: 219 ---DAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVS----WSTMVSGYCKTGDMEMAR 271

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           ML D    K    +  I+SGF EK    E     L++Q   AG++PD  T   +L+  A 
Sbjct: 272 MLFDKMPFKNLVTWTIIISGFAEKGLAKE--ATTLYNQMEAAGLKPDDGTLISILAACAE 329

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              LV G+ +HA   K      V V NAL+ MYAKCG +D A  IF  +S RD+VSWN M
Sbjct: 330 SGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCM 389

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           L   A+HG G+ A+ LF +M++EGF PD ++++ +L AC ++G  + G+  FN +E+ +G
Sbjct: 390 LQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHG 449

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P +EH+ CM+DLLGR GRL EA  L+ S P   + ++W TL+   ++      +    
Sbjct: 450 IVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVL 509

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
            RL+ LE  D G++ ++SN++A  G  +  A +R  M    + K +G S IE+D ++H F
Sbjct: 510 DRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEF 569

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
               K HPE+++IY  L  L  ++K
Sbjct: 570 TVFDKSHPETDKIYQILVKLGQDLK 594



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 18/375 (4%)

Query: 53  ERTLLFND---WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL 109
           ++  LF D   +P L+K   G G L   Q +H  + K G   D F  N+LI+ Y+K   L
Sbjct: 113 QKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLL 172

Query: 110 DV--AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE 167
            V  A KLF  M  +  ++W S+I G +  GD    LG      R+ + F+E      + 
Sbjct: 173 GVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGD----LG------RARKLFDEMAERDAVS 222

Query: 168 ACSLLEDRI-FGEQIHAFAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
             ++L+  +  GE   AF +     E NV   ++++S Y  +G    A  +F  + +K++
Sbjct: 223 WNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNL 282

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
                +I  + + G ++ A  ++  + ++  +P+D T  ++++ C E+  +  GK++H  
Sbjct: 283 VTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHAS 342

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
             K  +   ++V NA+V MY K G  ++A  +F+ +S R+L+SW  ++ G    GHG KA
Sbjct: 343 IKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKA 402

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVD 404
           I  F +    G   D   L  ++  C+    ++ GL   +     HG +  +     ++D
Sbjct: 403 IQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMID 462

Query: 405 IYAKGGDLKSARMLL 419
           +  +GG L+ A  L+
Sbjct: 463 LLGRGGRLEEAFRLV 477



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 205/470 (43%), Gaps = 14/470 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + VHA ++K    ND + A  LI+ ++  +++++A  +F+ +   +   + +LI+ ++ +
Sbjct: 40  KEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQN 99

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
                      DM ++    +  T   +L+AC+        + IH    K GF  ++FV 
Sbjct: 100 SQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVP 159

Query: 198 TSLISMYFHSGCF--REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
            SLI  Y   G      A  +F  +  KD+   N MI    KAG+   A  +F      +
Sbjct: 160 NSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLF-----DE 214

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
               D    N I   Y   G  E  Q   L  K    R +   + +V+ Y K G  E A 
Sbjct: 215 MAERDAVSWNTILDGYVKAG--EMSQAFNLFEKMP-ERNVVSWSTMVSGYCKTGDMEMAR 271

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +FD +  +NL++WT +ISG+   G   +A   + +    G+  D   L +++  C+   
Sbjct: 272 MLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESG 331

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L LG ++H    K      V +  ALVD+YAK G +  A  + +  S +    +N +L 
Sbjct: 332 LLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQ 391

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTG 494
           G    +    E  + LFS+ +  G +PD VT   +L        + +G S  ++     G
Sbjct: 392 GL--AMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHG 449

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
               +     +I +  + G ++ AF++ + +  + + V W  +L A  +H
Sbjct: 450 IVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVH 499



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 127/269 (47%), Gaps = 3/269 (1%)

Query: 68  SIGSGDLKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           +I  G +K G+   AF L +   + +    + +++ Y K   +++A+ LFD M  ++ +T
Sbjct: 225 TILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVT 284

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           WT +I G+ + G  +    +   M  +  K ++ T   IL AC+     + G+++HA   
Sbjct: 285 WTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIK 344

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K   + +V V  +L+ MY   G   +A ++F  ++ +D+   N M+      G  E A  
Sbjct: 345 KIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQ 404

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMY 305
           +F  +    F+P+  T   ++  C     V++G    + +    G+V  I     ++ + 
Sbjct: 405 LFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLL 464

Query: 306 GKHGMSEEAERMFDAIS-ERNLISWTALI 333
           G+ G  EEA R+  ++  E N + W  L+
Sbjct: 465 GRGGRLEEAFRLVQSMPMEPNDVIWGTLL 493


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 161/492 (32%), Positives = 291/492 (59%), Gaps = 6/492 (1%)

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
           ++ +C +      G+  H   ++ G+  +I   N ++ MY K  + + A + F+ +  ++
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV-CSNLELGLQLH 384
           L+SW  +I    ++    +A+   ++    G   +   +++V+  C+  C+ LE  +QLH
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILEC-MQLH 167

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
            F+IK    S+  +GTAL+ +YAK   +K A  + +    K    ++++++G+++     
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN--GF 225

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
            E+ +++F   +L G + DP   S  +S  A  A L+ G+ +HA S K+G+ +++ V ++
Sbjct: 226 HEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSS 285

Query: 505 LITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           LI MYAKCG I  A+ +F+G+ + R IV WNAM+S +A H     A++LFE+M++ GF P
Sbjct: 286 LIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFP 345

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           DD++ + VL AC + GL E G   F+ + + + L P + H++CM+D+LGRAG + +A +L
Sbjct: 346 DDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDL 405

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
           I   PF+ +  +W +L++  K+  N +F+ +A+K L ++EP +AG+ IL++N+YA     
Sbjct: 406 IERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKW 465

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM-KL 742
           DE A+ R  + +  + KE G SWIEI +K+H F    ++HP+ ++IY+KLD L  E+ KL
Sbjct: 466 DEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKL 525

Query: 743 KVKDSSAFELQD 754
             K  ++ +L D
Sbjct: 526 NYKVDTSNDLHD 537



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 196/413 (47%), Gaps = 18/413 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+A HA +++ G + D   +N LIN+Y+K + +D A+K F+ M V+S ++W ++I     
Sbjct: 62  GRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQ 121

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           + +    L +   M R    FNE T S +L  C+     +   Q+HAF+IK+  ++N FV
Sbjct: 122 NAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFV 181

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GT+L+ +Y      ++A  +F  +  K+    + M+  Y + G  E A  +F +     F
Sbjct: 182 GTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGF 241

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           + + +  ++ +S C     + EGKQ+H ++ K G    I V ++++ MY K G   EA  
Sbjct: 242 DQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYL 301

Query: 317 MFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           +F  + E R+++ W A+ISG+ R     +A+  F +    G   D      V++ CS   
Sbjct: 302 VFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMG 361

Query: 376 NLELGLQLHGFAIKHGYLSDVRLG-TALVDIYAKGGDLKSARMLLDGF------------ 422
             E G +     ++   LS   L  + ++DI  + G +  A  L++              
Sbjct: 362 LHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSL 421

Query: 423 --SCKY--TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
             SCK     EF  I + ++ ++  +     +L +    A  + D V  +R L
Sbjct: 422 LASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKL 474



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 184/383 (48%), Gaps = 5/383 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ C+     + G   HA  I+ G E ++     LI+MY        A   F  +  K 
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +   N +I    +  E   A  + + +       N++T ++V+  C     + E  QLH 
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            ++K  +     VG A++ +Y K    ++A +MF+++ E+N ++W+++++GYV++G   +
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+  F     +G   D   +++ +  C+  + L  G Q+H  + K G+ S++ + ++L+D
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288

Query: 405 IYAKGGDLKSARMLLDG-FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           +YAK G ++ A ++  G    +    +NA++SGF       E   M+LF + +  G  PD
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPE--AMILFEKMQQRGFFPD 346

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIF 522
            VT+  +L+  +       G+      ++    +  V+  + +I +  + G +  A+ + 
Sbjct: 347 DVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLI 406

Query: 523 KGISDRDIVS-WNAMLSAYALHG 544
           + +      S W ++L++  ++G
Sbjct: 407 ERMPFNATSSMWGSLLASCKIYG 429



 Score = 42.7 bits (99), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VRSAITWT 128
           G   L  G+ VHA   KSG  ++ + +++LI++YAK   +  A  +F G+L VRS + W 
Sbjct: 257 GLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWN 316

Query: 129 SLIKGY 134
           ++I G+
Sbjct: 317 AMISGF 322


>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 185/640 (28%), Positives = 334/640 (52%), Gaps = 8/640 (1%)

Query: 74  LKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           L   + +HA LL  G  +     A  L++ YA+      A  + DGM +R++  W + IK
Sbjct: 55  LAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIK 114

Query: 133 GYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLL----EDRIFGEQIHAFAIK 187
           G +D G +   L     M R      +  T   +++AC+ L    + R+  E + A  ++
Sbjct: 115 GLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVR 174

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
                +VFV  +L+ M+   GC  EA +VF  +  +D+     MI     AG+   A  +
Sbjct: 175 GVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSL 234

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  + S  F  +      VI  C     +  G  LHG AV+ GV  +  V NA+V MY K
Sbjct: 235 FSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCK 294

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G    A+R+F +I  ++++SW+ LI+GY ++G    ++N F E +  G+  +S+ +A++
Sbjct: 295 CGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASI 354

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +   S       G ++HGF++++G+     LG+A +D Y++ G ++ A ++L+    +  
Sbjct: 355 LPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDL 414

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +N++++G+   +  + +  +  F   +  G  PD VT   +L +    + L++G+ LH
Sbjct: 415 VIWNSMVAGY--AVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELH 472

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           AY ++   ++   V NALI MY KC  ++   +IF+ ++DRD  ++N ++S++  HG   
Sbjct: 473 AYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHED 532

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            A++LF+ MKR+G APD ++ + +L +C ++GL E G+  ++ + Q Y + P  EH++C+
Sbjct: 533 EAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCV 592

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VDL  R+G+L +A   ++S        +   L+   ++      + L +KR+ +  P D 
Sbjct: 593 VDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDP 652

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           G  IL+SN+YA  GM     ++RT + +  L  + G S I
Sbjct: 653 GYHILLSNIYANAGMWSHVTRIRTMIENRSLKNKTGNSLI 692



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 238/482 (49%), Gaps = 27/482 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVH----AFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           +P ++K     G ++ G+ V     A +++       F    L++++AK   L  A+ +F
Sbjct: 145 YPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVF 204

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC-SVILEACSLLEDR 175
           + ML R    WT++I G +  GD+   + +   M RSE    +    + ++ AC   ++ 
Sbjct: 205 ESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRM-RSEGFLADSVIIATVIPACGRAKEL 263

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G  +H  A++ G  ++  V  +L+ MY   GC   A+ VF  + +KDV   + +I  Y
Sbjct: 264 RTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGY 323

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
           ++ G+  ++ ++F  ++++  +PN  T  +++    E      GK++HG +++ G  +  
Sbjct: 324 SQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSK 383

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            +G+A +  Y + G   EAE + + + +R+L+ W ++++GY  +G+   A+  F     +
Sbjct: 384 FLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKV 443

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   D   + +V+  C+  S L  G +LH + ++H   S   +  AL+D+Y K   L+  
Sbjct: 444 GFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKG 503

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           + +    + + TA +N ++S F +   +DE   ++LF   +  G+ PD VTF  LLS S 
Sbjct: 504 KEIFQLVTDRDTATYNTLISSFGKHGHEDE--AIMLFDLMKRDGIAPDKVTFVALLS-SC 560

Query: 476 SQACLVRGRSLHAYSI----------KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           S A L+  + LH Y I          K  Y+        ++ +Y++ G +D A++    +
Sbjct: 561 SHAGLIE-KGLHFYDIMLQDYNISPGKEHYS-------CVVDLYSRSGKLDDAWKFVSSL 612

Query: 526 SD 527
            D
Sbjct: 613 QD 614


>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Glycine max]
          Length = 714

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 192/614 (31%), Positives = 311/614 (50%), Gaps = 8/614 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +   LLK G     +    LI+ Y K      A++LF+ +     ++W  LI GY   G 
Sbjct: 65  IQTQLLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGH 124

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
               L +   M R   + N+ T + +L +C   E  + G  +HAF IK+G   +  +  +
Sbjct: 125 PHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNA 184

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L SMY        ++ +F+ +  K+V   N MI  Y + G  + A   F  +L   ++P+
Sbjct: 185 LTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPS 244

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
             T  N++S       V E   +H   +K G   + SV  ++V +Y K G ++ A+ +++
Sbjct: 245 PVTMMNLMSAN----AVPE--TVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYE 298

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
               ++LIS T +IS Y   G    A+  F++ L L I  D+  L +V+ G S  S+  +
Sbjct: 299 CYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAI 358

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G   HG+ +K+G  +D  +   L+  Y++  ++ +A  L    S K    +N+++SG ++
Sbjct: 359 GCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQ 418

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
             A    D M LF Q  + G +PD +T + LLS       L  G +LH Y ++     + 
Sbjct: 419 --AGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVED 476

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
             G ALI MY KCG +D A +IF  I+D  +V+WN+++S Y+L+GL   A   F +++ +
Sbjct: 477 FTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQ 536

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
           G  PD I+ LGVL AC + GL   G+  F  + + YGL P L+H+AC+V LLGRAG   E
Sbjct: 537 GLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKE 596

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
           A+ +IN+        +W  L+S   +    K     +K L  L  K+ G ++ +SN+YA 
Sbjct: 597 AIEIINNMEIRPDSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAI 656

Query: 680 QGMLDEAAKVRTTM 693
            G  D+ A+VR  M
Sbjct: 657 VGRWDDVARVRDMM 670



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 238/543 (43%), Gaps = 33/543 (6%)

Query: 139 DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG---------EQIHAFAIKSG 189
           D  S L I   + +S    N  T S++++AC                   QI    +K G
Sbjct: 14  DASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRG 73

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            +  ++V T+LI  Y   G    A  +F  L   DV   N +I  Y++ G    A  +FV
Sbjct: 74  IDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFV 133

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           H+L   F PN  T  +++  C       +G+ +H   +K G+  +  + NA+ +MY K  
Sbjct: 134 HMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCD 193

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E ++ +F  + E+N+ISW  +I  Y ++G   KA+  F E L  G       +  ++ 
Sbjct: 194 DLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMS 253

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             +V         +H + IK G+  D  + T+LV +YAK G    A++L + +  K    
Sbjct: 254 ANAVPET------VHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLIS 307

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
              I+S + EK   + E  +  F Q     ++PD V    +L   +  +    G + H Y
Sbjct: 308 LTGIISSYSEK--GEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGY 365

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            +K G   D +V N LI+ Y++   I  A  +F   S++ +++WN+M+S     G    A
Sbjct: 366 GLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDA 425

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP--ILEHF--A 605
           + LF +M   G  PD I+I  +L  C   G    G     E    Y LR    +E F   
Sbjct: 426 MELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIG-----ETLHGYILRNNVKVEDFTGT 480

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLL--WRTLVSVSKL--MANSKFSILASKRLLD 661
            ++D+  + GRL  A  +  S      P L  W +++S   L  + +  F   +  +   
Sbjct: 481 ALIDMYTKCGRLDYAEKIFYS---INDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQG 537

Query: 662 LEP 664
           LEP
Sbjct: 538 LEP 540



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 226/476 (47%), Gaps = 13/476 (2%)

Query: 68  SIGSGDLKL-GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           S G  +L L G++VHAF +K+G   D   +N L ++YAK + L+ +Q LF  M  ++ I+
Sbjct: 153 SCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVIS 212

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W ++I  Y  +G  +    + C     +E +     +++    +L+      E +H + I
Sbjct: 213 WNTMIGAYGQNGFEDK--AVLCFKEMLKEGWQPSPVTMM----NLMSANAVPETVHCYII 266

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           K GF  +  V TSL+ +Y   G    A+ ++     KD+  +  +I  Y++ GE E A  
Sbjct: 267 KCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAVE 326

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
            F+  L  D +P+     +V+    +      G   HG  +K G+  +  V N +++ Y 
Sbjct: 327 CFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYS 386

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           +      A  +F   SE+ LI+W ++ISG V++G    A+  F +    G   D+  +A+
Sbjct: 387 RFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIAS 446

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++ GC     L +G  LHG+ +++    +   GTAL+D+Y K G L  A  +    +   
Sbjct: 447 LLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPC 506

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N+I+SG+   +   E      FS+ +  G+EPD +TF  +L+ + +   LV     
Sbjct: 507 LVTWNSIISGY--SLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLA-ACTHGGLVYAGME 563

Query: 487 HAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSA 539
           +   ++  Y     + +   ++ +  + G    A +I   +  R D   W A+LSA
Sbjct: 564 YFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRPDSAVWGALLSA 619



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 8/297 (2%)

Query: 47  SSVSCSERTLLFNDWPQLVK-ISIGSG-----DLKLGQAVHAFLLKSGSQNDTFEANNLI 100
           S+V C  +TL  +  P  V  IS+  G        +G A H + LK+G  ND   AN LI
Sbjct: 323 SAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLI 382

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
           + Y++F+ +  A  LF     +  ITW S+I G +  G     + + C M    +K +  
Sbjct: 383 SFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAI 442

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T + +L  C  L     GE +H + +++  +   F GT+LI MY   G    AE +F  +
Sbjct: 443 TIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSI 502

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
               +   N +I  Y+  G    AF  F  L     EP+  TF  V++ C     V  G 
Sbjct: 503 NDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGGLVYAGM 562

Query: 281 QLHGLAVK-FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER-NLISWTALISG 335
           +   +  K +G++  +     IV + G+ G+ +EA  + + +  R +   W AL+S 
Sbjct: 563 EYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRPDSAVWGALLSA 619


>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 606

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 177/546 (32%), Positives = 287/546 (52%), Gaps = 4/546 (0%)

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
            T+LI  YF  G  REA N+F  +  +DV     MI+ +        A+ +F  +L S+ 
Sbjct: 46  ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS-EEAE 315
           +PN +T ++V+  C     +  G   H LA K G+ R + V NA++ MY     + ++A 
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F+ I  +  +SWT LI+G+   G G   +  F + L   +  +S   +     C+  S
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +   G Q+H    K+G   D  +  +++D+Y +   L  A+      + K    +N +++
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
           G+      D  + + LF Q    G +P+  TF+ + +  A+ A L  G+ +H   ++ G+
Sbjct: 286 GYERS---DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGF 342

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             +V + N+LI MYAKCGSI  + ++F  +  RD+VSW  M+  Y  HG GK A+ LF+E
Sbjct: 343 DKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDE 402

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           M + G  PD I  +GVL  C ++GL + G+  F  + + Y + P  E + C+VDLLGRAG
Sbjct: 403 MVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAG 462

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           R+ EA  L+ + PF     +W  L+   K    S    LA++R+LD  P  AG+++L+S 
Sbjct: 463 RVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSK 522

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +YA +G   E AK+R  M  +   KE G SWIEI ++++ FV   K  P  E ++  +D+
Sbjct: 523 IYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDV 582

Query: 736 LNDEMK 741
           L   MK
Sbjct: 583 LIWHMK 588



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 212/461 (45%), Gaps = 17/461 (3%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           A NLI  Y        A  LF+ +  R  +TWT++I G+     Y     +  +M RSE 
Sbjct: 46  ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS-GCFREAE 214
           + N  T S +L+AC  ++    G   H+ A K G + +V+V  +L+ MY  S     +A 
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
           +VF  +  K       +I  +   G+       F  +L  D  PN ++F+     C    
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
               GKQ+H    K+G+  +  V N+I+ MY +     +A+R F  ++E+NLI+W  LI+
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           GY RS    ++++ F +    G   +     ++   C+  + L  G Q+HG  ++ G+  
Sbjct: 286 GYERS-DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDK 344

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +V L  +L+D+YAK G +  +  L      +    +  ++ G+       E   + LF +
Sbjct: 345 NVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKE--AVKLFDE 402

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRG----RS-LHAYSIKTGYAADVIVGNALITMY 509
              +G++PD + F  +L   +    + +G    RS L  Y+I      D  +   ++ + 
Sbjct: 403 MVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNIN----PDQEIYRCVVDLL 458

Query: 510 AKCGSIDGAFQIFKGIS-DRDIVSWNAML---SAYALHGLG 546
            + G ++ AFQ+ + +  + D   W A+L    AY L  LG
Sbjct: 459 GRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLG 499



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 3/259 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +HA + K G   D    N+++++Y + N L  A++ F  +  ++ ITW +LI GY +
Sbjct: 230 GKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-E 288

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
             D    L +   M     K N  T + I  AC+ L     G+Q+H   ++ GF+ NV +
Sbjct: 289 RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVAL 348

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLI MY   G   ++  +F  +  +D+     M++ Y   G  + A  +F  ++ S  
Sbjct: 349 INSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGI 408

Query: 257 EPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           +P+   F  V+  C     V++G K    +   + +  +  +   +V + G+ G  EEA 
Sbjct: 409 QPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAF 468

Query: 316 RMFDAIS-ERNLISWTALI 333
           ++ + +  E +   W AL+
Sbjct: 469 QLVENMPFEPDESVWGALL 487



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  GQ VH  +++ G   +    N+LI++YAK   +  + KLF  M  R  ++WT+++ G
Sbjct: 327 LSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIG 386

Query: 134 Y 134
           Y
Sbjct: 387 Y 387


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 1011

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 193/634 (30%), Positives = 328/634 (51%), Gaps = 66/634 (10%)

Query: 166 LEACSLLEDRIFGE-----QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           L++CSL    +         +HA  +K+G    +     L+++Y  S     A+ +F  +
Sbjct: 291 LQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEI 350

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             ++ +    +I  + +AG SEM F++F  + +    PN YT ++V+  C  +  ++ GK
Sbjct: 351 PQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGK 410

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +H   ++ G+  ++ +GN+I+ +Y K  + E AER+F+ ++E +++SW  +I  Y+R+G
Sbjct: 411 GVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAG 470

Query: 341 HGGKAINGF--LEFLDLGICCDSSCLATVIDGCSVC------------------------ 374
              K+++ F  L + D+          T++DG   C                        
Sbjct: 471 DVEKSLDMFRRLPYKDV------VSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVT 524

Query: 375 -----------SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
                      S++ELG QLHG  +K G+ SD  + ++LV++Y K G +  A ++L    
Sbjct: 525 FSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVP 584

Query: 424 CKYTAEFNA----------------ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
                + NA                ++SG++       ED +  F       +  D  T 
Sbjct: 585 LDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWN--GKYEDGLKTFRLMVRELVVVDIRTV 642

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           + ++S  A+   L  GR +HAY  K G+  D  VG++LI MY+K GS+D A+ +F+  ++
Sbjct: 643 TTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNE 702

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
            +IV W +M+S YALHG G  A+ LFEEM  +G  P++++ LGVL AC ++GL E G   
Sbjct: 703 PNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRY 762

Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           F  ++  Y + P +EH   MVDL GRAG L++  N I  +  S    +W++ +S  +L  
Sbjct: 763 FRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHK 822

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           N +     S+ LL + P D G+++L+SNM A     DEAA+VR+ M+   + K+ G SWI
Sbjct: 823 NVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWI 882

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           ++  ++H FV   + HP+ +EIYS LD+L   +K
Sbjct: 883 QLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLK 916



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 239/516 (46%), Gaps = 55/516 (10%)

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
            +HA  +K+GS      AN+L+ LYAK N +  AQKLFD +  R+  TWT LI G+   G
Sbjct: 310 TLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAG 369

Query: 139 DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
             E V  +  +M       N++T S +L+ CSL  +   G+ +HA+ +++G + +V +G 
Sbjct: 370 SSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGN 429

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           S++ +Y     F  AE +F  +   DV   N MI  Y +AG+ E +  +F  L   D   
Sbjct: 430 SILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVS 489

Query: 259 NDYTFTNVISVCYENLGVEE-------------------------------GKQLHGLAV 287
            +     ++   YE   +E+                               G+QLHG+ +
Sbjct: 490 WNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVL 549

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERM-----FDAISERN-----------LISWTA 331
           KFG   +  + +++V MY K G  ++A  +      D + + N           ++SW +
Sbjct: 550 KFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGS 609

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           ++SGYV +G     +  F   +   +  D   + T+I  C+    LE G  +H +  K G
Sbjct: 610 MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIG 669

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
           +  D  +G++L+D+Y+K G L  A M+    +      + +++SG+   +       + L
Sbjct: 670 HRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGY--ALHGQGMHAIGL 727

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMY 509
           F +    G+ P+ VTF  +L+ + S A L+     +   +K  Y  +  V +  +++ +Y
Sbjct: 728 FEEMLNQGIIPNEVTFLGVLN-ACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLY 786

Query: 510 AKCGSIDGAFQ-IFK-GISDRDIVSWNAMLSAYALH 543
            + G +      IFK GIS    V W + LS+  LH
Sbjct: 787 GRAGHLTKTKNFIFKNGISHLTSV-WKSFLSSCRLH 821



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 178/397 (44%), Gaps = 58/397 (14%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+LG+ VHA++L++G   D    N++++LY K    + A++LF+ M     ++W  +I 
Sbjct: 405 NLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIG 464

Query: 133 GYLDDGDYESVLGIACDMYRS-----------------------------------EEKF 157
            YL  GD E  L    DM+R                                      +F
Sbjct: 465 AYLRAGDVEKSL----DMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEF 520

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +  T S+ L   S L     G Q+H   +K GF+++ F+ +SL+ MY   G   +A  + 
Sbjct: 521 SAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIIL 580

Query: 218 RGL------------AYKDVRC--VNF--MILEYNKAGESEMAFHVFVHLLSSDFEPNDY 261
           R +            +YK+ +   V++  M+  Y   G+ E     F  ++      +  
Sbjct: 581 RDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIR 640

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           T T +IS C     +E G+ +H    K G   +  VG++++ MY K G  ++A  +F   
Sbjct: 641 TVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQS 700

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
           +E N++ WT++ISGY   G G  AI  F E L+ GI  +      V++ CS    +E G 
Sbjct: 701 NEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGC 760

Query: 382 QLHGFAIKHGYLSD--VRLGTALVDIYAKGGDLKSAR 416
           +     +K  Y  +  V   T++VD+Y + G L   +
Sbjct: 761 RYFRM-MKDAYCINPGVEHCTSMVDLYGRAGHLTKTK 796



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 9/150 (6%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+ G+ VHA++ K G + D +  ++LI++Y+K   LD A  +F      + + WTS+
Sbjct: 652 AGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSM 711

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFA 185
           I GY   G     +G+  +M       NE T   +L ACS   L+E+  R F     A+ 
Sbjct: 712 ISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYC 771

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           I  G E+     TS++ +Y  +G   + +N
Sbjct: 772 INPGVEH----CTSMVDLYGRAGHLTKTKN 797


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 191/619 (30%), Positives = 330/619 (53%), Gaps = 16/619 (2%)

Query: 103 YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEH 160
           YA    +  A+KLF+ M   S +++  +I+ Y+ +G Y   + +   M     K   + +
Sbjct: 59  YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   + +A   L+    G  +H   ++S F  + +V  +L++MY + G    A +VF  +
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             +DV   N MI  Y + G    A  +F  +++   + +  T  +++ VC     +E G+
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +H L  +  +  +I V NA+V MY K G  +EA  +FD +  R++I+WT +I+GY   G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298

Query: 341 HGGKAINGFLEFLDL----GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
                +   LE   L    G+  ++  +A+++  C     +  G  LHG+A++    SD+
Sbjct: 299 D----VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDI 354

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            + T+L+ +YAK   +     +  G S  +T  ++AI++G ++   +   D + LF + R
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQN--ELVSDALGLFKRMR 412

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
              +EP+  T + LL   A+ A L +  ++H Y  KTG+ + +     L+ +Y+KCG+++
Sbjct: 413 REDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLE 472

Query: 517 GAFQIFKGISDR----DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
            A +IF GI ++    D+V W A++S Y +HG G  AL +F EM R G  P++I+    L
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSAL 532

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC +SGL E G+ LF  + + Y       H+ C+VDLLGRAGRL EA NLI + PF  +
Sbjct: 533 NACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPT 592

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
             +W  L++      N +   +A+ +L +LEP++ G+++L++N+YA  G   +  KVR+ 
Sbjct: 593 STVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSM 652

Query: 693 MNDLRLSKEAGCSWIEIDS 711
           M ++ L K+ G S IEI S
Sbjct: 653 MENVGLRKKPGHSTIEIRS 671



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 234/491 (47%), Gaps = 12/491 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P + K +     +KLG  VH  +L+S    D +  N L+ +Y  F ++++A+ +FD M 
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R  I+W ++I GY  +G     L +   M       +  T   +L  C  L+D   G  
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H    +    + + V  +L++MY   G   EA  VF  +  +DV     MI  Y + G+
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 299

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A  +   +      PN  T  +++SVC + L V +GK LHG AV+  V  +I +  +
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS 359

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +++MY K    +   R+F   S+ +   W+A+I+G V++     A+  F       +  +
Sbjct: 360 LISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPN 419

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            + L +++   +  ++L   + +H +  K G++S +   T LV +Y+K G L+SA  + +
Sbjct: 420 IATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479

Query: 421 GFSCKYTAE----FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           G   K+ ++    + A++SG+   +  D  + + +F +   +G+ P+ +TF+  L+  + 
Sbjct: 480 GIQEKHKSKDVVLWGALISGY--GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGN---ALITMYAKCGSIDGAFQIFKGIS-DRDIVS 532
              +  G +L  + ++  +   +   N    ++ +  + G +D A+ +   I  +     
Sbjct: 538 SGLVEEGLTLFRFMLE--HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTV 595

Query: 533 WNAMLSAYALH 543
           W A+L+A   H
Sbjct: 596 WGALLAACVTH 606


>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 181/582 (31%), Positives = 313/582 (53%), Gaps = 11/582 (1%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYF---HSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           QI + AI SG   +  V + L  +Y+   H   F  +  +F  +   +V   NFM   Y+
Sbjct: 46  QILSHAIASGVFRDPVVSSKL--LYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYS 103

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           ++        ++  +L +   P++Y+F  V+  C     + +G+++H   +K GV  ++ 
Sbjct: 104 RSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVF 163

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISE--RNLISWTALISGYVRSGHGGKAINGFLEFL- 353
           V NA+++ +   G  E A  +FD +    R+++SW ++ISGY++S     A+  F E L 
Sbjct: 164 VQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLG 223

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
           D  +  D   L + +  C     L+LG ++HG     G++ DV +G++L+D+Y+K G ++
Sbjct: 224 DGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIE 283

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            AR + D    + T  + ++++G+ +  +D  ++ + LF + ++ G   D  T + +LS 
Sbjct: 284 DARKVFDRIPHRNTVCWTSMIAGYAQ--SDLFKEAIELFREMQIGGFAADAATIACVLSA 341

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
                 L +GR +H Y  +     D+   NALI MY+KCG I  A +IF G++  DI SW
Sbjct: 342 CGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSW 401

Query: 534 NAMLSAYALHGLGKGALLLFEEMKR-EGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           +A++S  A++G    AL LF +M+      P++I+ LGVL AC + G  + G+  FN + 
Sbjct: 402 SAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMT 461

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
           QIY L P +EH+ CMVDLLGRA  L EA   I + P     ++WR+L+   +   N + +
Sbjct: 462 QIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELA 521

Query: 653 ILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
             A+K++ +LEP+  G+ +L+SN+YA      +  +VR  M   R+ K+ GCS++EID  
Sbjct: 522 EFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGL 581

Query: 713 LHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFELQD 754
           +H    + + HPE   IY  +  +N  ++ K  D    + Q+
Sbjct: 582 VHELFVADRSHPEMGAIYETMISINKALQSKGFDPGILDHQE 623



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 179/360 (49%), Gaps = 6/360 (1%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           ++ LF  +   +  +W  + + Y         + +   M R+    + ++   +L+AC+ 
Sbjct: 80  SRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACAR 139

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA--YKDVRCVN 229
           L     G +IH+  +K G   +VFV  +LIS +   G    A  VF  L    +DV   N
Sbjct: 140 LSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWN 199

Query: 230 FMILEYNKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
            MI  Y ++   E+A  VF  LL      P++ T  + +SVC     ++ GK++HGL   
Sbjct: 200 SMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTG 259

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G V ++ VG++++ MY K G  E+A ++FD I  RN + WT++I+GY +S    +AI  
Sbjct: 260 SGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIEL 319

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F E    G   D++ +A V+  C     L  G  +H +  ++    D+    AL+ +Y+K
Sbjct: 320 FREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSK 379

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ-QRLAGMEPDPVTF 467
            GD++ A  +  G +      ++A++SG    +  + +  + LFSQ + ++ + P+ +TF
Sbjct: 380 CGDIQKALEIFHGLTQPDIFSWSAVISGL--AMNGESDKALHLFSQMEMISDIRPNEITF 437



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 3/279 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LVRSAITWTSLI 131
           L  G+ +H+  LK G   D F  N LI+ ++    ++ A+ +FD +  LVR  ++W S+I
Sbjct: 143 LHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMI 202

Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GYL    YE  L +  ++        +E T    L  C  L     G++IH     SGF
Sbjct: 203 SGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGF 262

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             +VFVG+SLI MY   G   +A  VF  + +++  C   MI  Y ++   + A  +F  
Sbjct: 263 VLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFRE 322

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +    F  +  T   V+S C     + +G+ +H    +  +  +++  NA++ MY K G 
Sbjct: 323 MQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGD 382

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
            ++A  +F  +++ ++ SW+A+ISG   +G   KA++ F
Sbjct: 383 IQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLF 421



 Score = 39.3 bits (90), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L  G+ +H +  ++  + D    N LI +Y+K   +  A ++F G+      +W+++I
Sbjct: 346 GALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVI 405

Query: 132 KGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACS 170
            G   +G+ +  L +   M   S+ + NE T   +L AC+
Sbjct: 406 SGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACN 445


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 196/664 (29%), Positives = 333/664 (50%), Gaps = 7/664 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
            HA ++  G +ND      L    +    +  A+ +F  +       +  L++G+  +  
Sbjct: 39  THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98

Query: 140 YESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
             S L +   + +S + K N  T +  + A S   D   G  IH  A+  G ++ + +G+
Sbjct: 99  PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS 158

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +++ MYF      +A  VF  +  KD    N MI  Y K      +  VF  L++     
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218

Query: 259 NDYT-FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
            D T   +++    E   +  G Q+H LA K G      V    +++Y K G  +    +
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL 278

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F    + +++++ A+I GY  +G    +++ F E +  G    SS L +++    V  +L
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHL 335

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
            L   +HG+ +K  +LS   + TAL  +Y+K  +++SAR L D    K    +NA++SG+
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +      ED + LF + + +   P+PVT + +LS  A    L  G+ +H     T + +
Sbjct: 396 TQN--GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
            + V  ALI MYAKCGSI  A ++F  ++ ++ V+WN M+S Y LHG G+ AL +F EM 
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
             G  P  ++ L VL AC ++GL + G  +FN +   YG  P ++H+ACMVD+LGRAG L
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
             A+  I +        +W TL+   ++  ++  +   S++L +L+P + G  +L+SN++
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           +      +AA VR T    +L+K  G + IEI    H F +  + HP+ +EIY KL+ L 
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLE 693

Query: 738 DEMK 741
            +M+
Sbjct: 694 GKMR 697



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 229/487 (47%), Gaps = 20/487 (4%)

Query: 67  ISIGSG--DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           IS  SG  D + G+ +H   +  G  ++    +N++ +Y KF R++ A+K+FD M  +  
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           I W ++I GY  +  Y   + +  D+   S  + +  T   IL A + L++   G QIH+
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            A K+G  ++ +V T  IS+Y   G  +    +FR     D+   N MI  Y   GE+E+
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           +  +F  L+ S       T  +++ V    + +     +HG  +K   +   SV  A+ T
Sbjct: 306 SLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTT 362

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           +Y K    E A ++FD   E++L SW A+ISGY ++G    AI+ F E        +   
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           +  ++  C+    L LG  +H       + S + + TAL+ +YAK G +  AR L D  +
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR- 482
            K    +N ++SG+   +    ++ + +F +   +G+ P PVTF  +L  + S A LV+ 
Sbjct: 483 KKNEVTWNTMISGY--GLHGQGQEALNIFYEMLNSGITPTPVTFLCVL-YACSHAGLVKE 539

Query: 483 -----GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAM 536
                   +H Y    G+   V     ++ +  + G +  A Q  + +S     S W  +
Sbjct: 540 GDEIFNSMIHRY----GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETL 595

Query: 537 LSAYALH 543
           L A  +H
Sbjct: 596 LGACRIH 602



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 222/464 (47%), Gaps = 9/464 (1%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           Q HA  I  GF N++ + T L       G    A ++F  +   DV   N ++  ++   
Sbjct: 38  QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 240 ESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
               +  VF HL  S+D +PN  T+   IS          G+ +HG AV  G   E+ +G
Sbjct: 98  SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           + IV MY K    E+A ++FD + E++ I W  +ISGY ++    ++I  F + ++    
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 359 -CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D++ L  ++   +    L LG+Q+H  A K G  S   + T  + +Y+K G +K    
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           L   F       +NA++ G+      + E  + LF +  L+G     +  S L+SL    
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSN--GETELSLSLFKELMLSGAR---LRSSTLVSLVPVS 332

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L+   ++H Y +K+ + +   V  AL T+Y+K   I+ A ++F    ++ + SWNAM+
Sbjct: 333 GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           S Y  +GL + A+ LF EM++  F+P+ ++I  +L AC   G    G  + + +      
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
             I    A ++ +  + G ++EA  L +     ++ + W T++S
Sbjct: 453 SSIYVSTA-LIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMIS 494



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 1/260 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           LV +   SG L L  A+H + LKS   +    +  L  +Y+K N ++ A+KLFD    +S
Sbjct: 325 LVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKS 384

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W ++I GY  +G  E  + +  +M +SE   N  T + IL AC+ L     G+ +H 
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD 444

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
               + FE++++V T+LI MY   G   EA  +F  +  K+    N MI  Y   G+ + 
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQE 504

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIV 302
           A ++F  +L+S   P   TF  V+  C     V+EG ++ + +  ++G    +     +V
Sbjct: 505 ALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMV 564

Query: 303 TMYGKHGMSEEAERMFDAIS 322
            + G+ G  + A +  +A+S
Sbjct: 565 DILGRAGHLQRALQFIEAMS 584


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 195/635 (30%), Positives = 314/635 (49%), Gaps = 65/635 (10%)

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C    ++   +++H   IKS      F+  +LI+ Y   G    A +VF  +   +    
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSD--------------------------------F 256
           N M+  Y+K+G+      +F  + + D                                 
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
             N  TF+ ++ +      V+ G+Q+HG  VKFG    + VG+++V MY K G+   A +
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 317 MFDAISERNL-------------------------------ISWTALISGYVRSGHGGKA 345
           +FD + ERN+                               ISWT +I+G +++G   +A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           ++ F +    G+  D     +V+  C     L+ G ++H   I+ GY  +V +G+ALVD+
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           Y K   ++ A  +    + K    + A+L G+ +     EE V V    QR  G+EPD  
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQN-GFSEEAVRVFCDMQR-NGIEPDDF 372

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T   ++S  A+ A L  G   H  ++ +G  + + V NALIT+Y KCGSI+ + Q+F  +
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
           S RD VSW A++S YA  G     + LFE M  +G  PD ++ + VL AC  +GL E G 
Sbjct: 433 SFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQ 492

Query: 586 CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
             F  + + +G+ P  +H+ CM+DL GRAGRL EA N IN  PFS   + W TL+S  +L
Sbjct: 493 QYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRL 552

Query: 646 MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
             N +    A++ LL+L+P++   +IL+S++YA +G     A++R  M +    KE G S
Sbjct: 553 YGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFS 612

Query: 706 WIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           WI+  SK++ F A  +  P S++IY++L+ LN +M
Sbjct: 613 WIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKM 647



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 197/381 (51%), Gaps = 32/381 (8%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD-------------- 117
           G + LG+ +H  ++K G     F  ++L+++YAK   + VA ++FD              
Sbjct: 152 GCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMI 211

Query: 118 -----------------GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
                            GM  R +I+WT++I G + +G     + +  DM +     +++
Sbjct: 212 TGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQY 271

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   +L AC  L     G++IH   I+SG+ +NVFVG++L+ MY      R AE VF+ +
Sbjct: 272 TFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRM 331

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
           A K+V     M++ Y + G SE A  VF  +  +  EP+D+T  +VIS C     +EEG 
Sbjct: 332 ANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGA 391

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           Q H  A+  G++  I+V NA++T+YGK G  E++ ++FD +S R+ +SWTAL+SGY + G
Sbjct: 392 QFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFG 451

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLG 399
              + I+ F   L  G+  D+     V+  CS    +E G Q     +K HG +      
Sbjct: 452 KANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHY 511

Query: 400 TALVDIYAKGGDLKSARMLLD 420
           T ++D++ + G L+ A+  ++
Sbjct: 512 TCMIDLFGRAGRLEEAKNFIN 532



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 241/541 (44%), Gaps = 70/541 (12%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
            + +H  ++KS +  +TF  NNLIN Y+K   +  A+ +FD M   ++ +W +++  Y  
Sbjct: 24  AKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSK 83

Query: 137 DGDYESVLGI---------------------------ACDMYRSEEK-----FNEHTCSV 164
            GD  ++  I                           A   Y S  K      N  T S 
Sbjct: 84  SGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFST 143

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L   S       G QIH   +K GF   VFVG+SL+ MY   G    A  VF  +  ++
Sbjct: 144 MLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERN 203

Query: 225 VRCVNFMILEYNKAG---ESEMAFH----------------------------VFVHLLS 253
           V   N MI    ++G   +S+  FH                            +F  +  
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
                + YTF +V++ C     ++EGK++H L ++ G    + VG+A+V MY K      
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRY 323

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           AE +F  ++ +N++SWTA++ GY ++G   +A+  F +    GI  D   L +VI  C+ 
Sbjct: 324 AEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCAN 383

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            ++LE G Q H  A+  G +S + +  AL+ +Y K G ++ +  L D  S +    + A+
Sbjct: 384 LASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTAL 443

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +SG+ +    +E   + LF +  + G++PD VTF  +LS  +    + RG+      +K 
Sbjct: 444 VSGYAQFGKANE--TIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKD 501

Query: 494 -GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LGKG 548
            G          +I ++ + G ++ A      +    D + W  +LS+  L+G   +GK 
Sbjct: 502 HGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKW 561

Query: 549 A 549
           A
Sbjct: 562 A 562



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 133/263 (50%), Gaps = 2/263 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK G+ +H  +++SG  ++ F  + L+++Y K   +  A+ +F  M  ++ ++WT+++ G
Sbjct: 286 LKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVG 345

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G  E  + + CDM R+  + ++ T   ++ +C+ L     G Q H  A+ SG  + 
Sbjct: 346 YGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISF 405

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + V  +LI++Y   G   ++  +F  ++++D      ++  Y + G++     +F  +L 
Sbjct: 406 ITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLV 465

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-FGVVREISVGNAIVTMYGKHGMSE 312
              +P+  TF  V+S C     VE G+Q     +K  G++        ++ ++G+ G  E
Sbjct: 466 QGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLE 525

Query: 313 EAERMFDAIS-ERNLISWTALIS 334
           EA+   + +    + I W  L+S
Sbjct: 526 EAKNFINKMPFSPDSIGWATLLS 548


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/575 (31%), Positives = 317/575 (55%), Gaps = 10/575 (1%)

Query: 165 ILEACSL--LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           IL  C+   L D+  G Q+H + +KSG   N+     LI MY        A  VF  +  
Sbjct: 12  ILRVCTRKGLSDQ--GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           ++V   + ++  +   G+ + +  +F  +      PN++TF+  +  C     +E+G Q+
Sbjct: 70  RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           HG  +K G    + VGN++V MY K G   EAE++F  I +R+LISW A+I+G+V +G+G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189

Query: 343 GKAIN--GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY--LSDVRL 398
            KA++  G ++  ++    D   L +++  CS    +  G Q+HGF ++ G+   S   +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
             +LVD+Y K G L SAR   D    K    +++++ G+ ++   +  + M LF + +  
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQE--GEFVEAMGLFKRLQEL 307

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
             + D    S ++ + A  A L +G+ + A ++K     +  V N+++ MY KCG +D A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            + F  +  +D++SW  +++ Y  HGLGK ++ +F EM R    PD++  L VL AC +S
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           G+ + G  LF+++ + +G++P +EH+AC+VDLLGRAGRL EA +LI++ P   +  +W+T
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+S+ ++  + +      K LL ++ K+  +++++SN+Y   G  +E    R   N   L
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
            KEAG SW+EI+ ++H F +    HP +  I   L
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETL 582



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 237/487 (48%), Gaps = 13/487 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH +LLKSGS  +   +N LI++Y K     +A K+FD M  R+ ++W++L+ G++ 
Sbjct: 25  GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +GD +  L +  +M R     NE T S  L+AC LL     G QIH F +K GFE  V V
Sbjct: 85  NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G SL+ MY   G   EAE VFR +  + +   N MI  +  AG    A   F  +  ++ 
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204

Query: 257 E--PNDYTFTNVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHGMSE 312
           +  P+++T T+++  C     +  GKQ+HG  V+  F      ++  ++V +Y K G   
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A + FD I E+ +ISW++LI GY + G   +A+  F    +L    DS  L+++I   +
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             + L  G Q+   A+K     +  +  ++VD+Y K G +  A         K    +  
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++G+  K    ++ V + +   R   +EPD V +  +LS  +    +  G  L +  ++
Sbjct: 385 VITGY-GKHGLGKKSVRIFYEMLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442

Query: 493 T-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGK 547
           T G    V     ++ +  + G +  A  +   +  +  V  W  +LS   +HG   LGK
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502

Query: 548 --GALLL 552
             G +LL
Sbjct: 503 EVGKILL 509



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 166/323 (51%), Gaps = 10/323 (3%)

Query: 258 PND-YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           PN      +++ VC      ++G Q+H   +K G    +   N ++ MY K      A +
Sbjct: 3   PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD++ ERN++SW+AL+SG+V +G    +++ F E    GI  +    +T +  C + + 
Sbjct: 63  VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           LE GLQ+HGF +K G+   V +G +LVD+Y+K G +  A  +      +    +NA+++G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182

Query: 437 FMEKIADDEEDVMVLFSQQRLAGME--PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           F+   A      +  F   + A ++  PD  T + LL   +S   +  G+ +H + +++G
Sbjct: 183 FVH--AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240

Query: 495 Y--AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +   +   +  +L+ +Y KCG +  A + F  I ++ ++SW++++  YA  G    A+ L
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300

Query: 553 FEEMKREGFAPDDI---SILGVL 572
           F+ ++      D     SI+GV 
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVF 323



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 140/288 (48%), Gaps = 22/288 (7%)

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L +++  C+     + G Q+H + +K G   ++     L+D+Y K  +   A  + D   
Sbjct: 9   LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    ++A++SG +  +  D +  + LFS+    G+ P+  TFS  L        L +G
Sbjct: 69  ERNVVSWSALMSGHV--LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             +H + +K G+   V VGN+L+ MY+KCG I+ A ++F+ I DR ++SWNAM++ +   
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186

Query: 544 GLGKGALLLFEEMKREGFA--PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
           G G  AL  F  M+       PD+ ++  +L+AC  +G+   G       +QI+G   + 
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG-------KQIHGF-LVR 238

Query: 602 EHFAC---------MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
             F C         +VDL  + G L  A    +     ++ + W +L+
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 198/692 (28%), Positives = 341/692 (49%), Gaps = 20/692 (2%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           + W  L ++   S  L  G+ +H  +++SG  +  F +N+L+++YA+      A+ L D 
Sbjct: 13  DSWRDLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDR 72

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R+A++W ++I+     GD+   L     M +     +      +++A   +++   G
Sbjct: 73  MPRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQE---G 129

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           E +  FA KSGF+ +  VGT+LI MY   G    A++ F  +  + V   N +I  Y++ 
Sbjct: 130 EIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRG 189

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE-----GKQLHGLAVKFGVVR 293
            E E +  VF  +L     PN  T   +I +     G+       G  +H  ++  G++ 
Sbjct: 190 DEKEQSLRVFREMLLQGIAPNAVT---IICIASAVAGIAAKITTCGNLIHACSIDSGLIS 246

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             +V N+I+ ++G+ G    A  +F+ + +R++ SW  +I+ + ++GH  +A++ +    
Sbjct: 247 VTTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGR-- 304

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
            + I  D      V++ C    +LE G  +H  A  HGY SD+ + TALV +Y + G L 
Sbjct: 305 -MTIRPDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLD 363

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            A  +            NAI++   +    D    ++ F Q    G+ P   T   +L  
Sbjct: 364 RAAEVFAAIQHPGVITLNAIIAAHAQFGRADGS--LLHFRQMLQLGIRPSKFTLVAVLGA 421

Query: 474 SASQACLVRG-RSLHAYSIKTG---YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
            A+        R LH +  +        D++V NAL+ MYAKCG +D A  IF      +
Sbjct: 422 CATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGN 481

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           + +WNA+++ YA HG    A+ L  EM+  G +PD IS    L A  ++   E G  +F 
Sbjct: 482 VSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFY 541

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            I + YGL P +EH+  +VDLLGRAG L EA   + S   +     W  L+   ++  + 
Sbjct: 542 AISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQ 601

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
             ++ A++ ++ ++P    S+ ++SN+Y+  G  DEA ++R  M +    KE G SWIE+
Sbjct: 602 DRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEV 661

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            +++H F    + HP + EIY +LD L   +K
Sbjct: 662 KNRVHEFAVKDRSHPRTGEIYERLDELRVVLK 693


>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
 gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
          Length = 704

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/653 (31%), Positives = 330/653 (50%), Gaps = 25/653 (3%)

Query: 104 AKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF---NEH 160
           A+ +RL  A +LFDGM  R  + + +L+ G+   GD+   + +   +  S       +  
Sbjct: 12  ARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPLAPADPF 71

Query: 161 TCSVILEACSLLEDRIF---GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
             S++ ++C+   D  F      +HAFA++S   ++VFV T+L  +Y  +GC   A  VF
Sbjct: 72  VLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVF 131

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             + +K+V     ++    +AG    A   F  + +S    + Y +   ++ C +   + 
Sbjct: 132 DEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLS 191

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE---RNLISWTALIS 334
            G+++H    K G+     V N + T+Y +     + +R   A+S    R++ +WT +IS
Sbjct: 192 RGREVHAFCAKLGLDSTPYVANTLATLYAR---CSDVDRALAAVSRMGTRDVAAWTTVIS 248

Query: 335 GYVRSGHGGKAINGFLEFL----DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
            YV++G   +AI  F+  L     +    +    A VI  C+  + + LG QLH  A + 
Sbjct: 249 AYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARK 308

Query: 391 GYLSDVRLGTALVDIYAKG-GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
           G+     +  +LV +Y +  G L +A  +      K    ++AI+SG+ ++     ED  
Sbjct: 309 GFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQE--GLAEDAF 366

Query: 450 VLFSQQRLAGMEPDP--VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
            LF + R     P P   T + LLS+ A+ A L  GR LH  ++  G     ++ +ALI 
Sbjct: 367 ALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALID 426

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY K GS+  A  +F      D+VSW AM+  YA HG  K AL LF+EM   G  PD ++
Sbjct: 427 MYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVT 486

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            +GVL AC ++G  E G+   NE+ QIYGL P  EH+ C+VDLLGRAGR++EA  LI   
Sbjct: 487 FIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKI 546

Query: 628 PFSESP-LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
             +E   ++W +L+         +    A++R ++ EP  AG+ + ++N+YA +G   EA
Sbjct: 547 AANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQWHEA 606

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDS---KLHHFVASGKDHPESEEIYSKLDLL 736
           A+ R  M    + K AG S I +     ++  FVAS + HP+   IY  L+L+
Sbjct: 607 AQERHMMKQKGVVKGAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLELI 659



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 178/362 (49%), Gaps = 20/362 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L  G+ VHAF  K G  +  + AN L  LYA+ + +D A      M  R    WT++I
Sbjct: 188 GLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVI 247

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKF----NEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
             Y+  G  +  +     M R E       NE+T + ++ AC+ +     GEQ+HA A +
Sbjct: 248 SAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAAR 307

Query: 188 SGFENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
            GF     V  SL+++Y   +GC   A+ VFR    KDV   + +I  Y + G +E AF 
Sbjct: 308 KGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFA 367

Query: 247 VFVHLL--SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           +F  +   S    PN++T  +++SVC     ++ G+QLH LAV  G+     + +A++ M
Sbjct: 368 LFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDM 427

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           YGK G   +A+ +F    + +++SWTA+I GY   GH  KA+  F E   +G+  D    
Sbjct: 428 YGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTF 487

Query: 365 ATVIDGCSVCSNLELGL-------QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             V++ C     +ELGL       Q++G      Y +    G  +VD+  + G +  A  
Sbjct: 488 IGVLNACCHAGEVELGLRYLNEMNQIYGL-----YPAKEHYGC-VVDLLGRAGRINEAEE 541

Query: 418 LL 419
           L+
Sbjct: 542 LI 543



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 225/496 (45%), Gaps = 42/496 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L    ++HAF ++S + +  F A  L ++YAK   L +A K+FD M  ++ ++WT+L+  
Sbjct: 89  LPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVAS 148

Query: 134 YLDDGDYESVL---------GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
               G     L         G+ CD Y           + +L           G ++HAF
Sbjct: 149 LTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSR---------GREVHAF 199

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
             K G ++  +V  +L ++Y        A      +  +DV     +I  Y + G ++ A
Sbjct: 200 CAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEA 259

Query: 245 FHVFVHLLSSD----FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              FV +L  +      PN+YT+  VI+ C +   V  G+QLH  A + G     SV N+
Sbjct: 260 IEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANS 319

Query: 301 IVTMYGK-HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +VT+Y +  G    A+ +F     ++++SW+A+ISGY + G    A   F E      C 
Sbjct: 320 LVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCP 379

Query: 360 DSS--CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +   LA+++  C+  ++L+ G QLH  A+  G      + +AL+D+Y K G +  A +
Sbjct: 380 RPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADI 439

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +           + A++ G+ E      +  + LF +    G++PD VTF  +L+     
Sbjct: 440 VFSHRVKDDVVSWTAMIVGYAEH--GHSKKALELFQEMCHVGLKPDHVTFIGVLN----- 492

Query: 478 ACLVRG------RSLHAYSIKTG-YAADVIVGNALITMYAKCGSIDGAFQIFKGIS--DR 528
           AC   G      R L+  +   G Y A    G  ++ +  + G I+ A ++   I+  +R
Sbjct: 493 ACCHAGEVELGLRYLNEMNQIYGLYPAKEHYG-CVVDLLGRAGRINEAEELIGKIAANER 551

Query: 529 DIVSWNAMLSAYALHG 544
           D V W ++L A A  G
Sbjct: 552 DGVVWTSLLRACAARG 567


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 184/637 (28%), Positives = 336/637 (52%), Gaps = 5/637 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GD+   +++H ++++         +N+LI++Y K   +  AQ++FD M VR  ++W +++
Sbjct: 214 GDVGCCKSIHGYVVRRSICGVV--SNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMM 271

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY+ +G Y   L +   M R   K N+      L   + + D   G++I+ +A++ G  
Sbjct: 272 AGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLM 331

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +++ V T ++ MY   G  ++A  +F  L  +D+   +  +    + G       +F  +
Sbjct: 332 SDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVM 391

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                +P+    + ++S C E   +  GK +H  A+K  +  +IS+   +V+MY +  + 
Sbjct: 392 QYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELF 451

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
             A  +F+ +  ++++ W  LI+G+ + G    A+  F      GI  DS  +  +   C
Sbjct: 452 TYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSAC 511

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA-RMLLDGFSCKYTAEF 430
           ++  +L+LG  LHG   K G+ SD+ +  AL+D+YAK G L S  R+ L     K    +
Sbjct: 512 AIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSW 571

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N +++G++     +E   +  F + +L  + P+ VTF  +L   +  + L    + H   
Sbjct: 572 NVMIAGYLHNGYSNE--AISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCI 629

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           I+ G+ +  ++GN+LI MYAKCG +  + + F  + ++D +SWNAMLSAYA+HG G+ A+
Sbjct: 630 IRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAV 689

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            LF  M+      D +S + VL AC +SGL + G  +F  + + + + P +EH+ACMVDL
Sbjct: 690 ALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDL 749

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LG AG   E ++L+N         +W  L++  K+ +N     +A   LL LEP++    
Sbjct: 750 LGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHH 809

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           +++S++YA  G  ++A + R+ +N+  L K  G SW+
Sbjct: 810 VVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/615 (23%), Positives = 281/615 (45%), Gaps = 10/615 (1%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H F ++  + N+ +    LIN     N L      F  +   S I + S IK Y     +
Sbjct: 23  HIFPIQQQNNNNHYL--KLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHF 80

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
              + +   + +   K ++ T + +L+AC+   D   G  I+   + +G E +V++GTSL
Sbjct: 81  HKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSL 140

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           I M+   GC   A NVF  +  KD  C N MI   +++     A  +F  +    FE + 
Sbjct: 141 IDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDK 200

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
            +  N+         V   K +HG  V+  +   +S  N+++ MY K G    A+R+FD 
Sbjct: 201 VSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGVVS--NSLIDMYCKCGDVHSAQRVFDR 258

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           +  R+ +SW  +++GYV++G   + +    +     +  +   +   +   +   +LE G
Sbjct: 259 MGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKG 318

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            +++ +A++ G +SD+ + T +V +YAK G+LK AR L      +    ++A LS  +E 
Sbjct: 319 KEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVE- 377

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                 +V+ +F   +  G++PD    S L+S     + +  G+ +H Y+IK    +D+ 
Sbjct: 378 -TGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDIS 436

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           +   L++MY +      A  +F  +  +DIV WN +++ +  +G    AL +F  ++  G
Sbjct: 437 MVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSG 496

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             PD  +++G+  AC      + G CL   IE+  G    +     ++D+  + G L   
Sbjct: 497 ILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEK-SGFESDIHVKVALMDMYAKCGSLCSV 555

Query: 621 MNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
             L   +   +  + W  +++  +    +N   S     +L ++ P +  +F+ +    +
Sbjct: 556 ERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRP-NLVTFVTILPAVS 614

Query: 679 GQGMLDEAAKVRTTM 693
              +L EA    T +
Sbjct: 615 YLSILREAMAFHTCI 629



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 248/517 (47%), Gaps = 9/517 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K    + D   G  ++  ++ +G + D +   +LI+++ K   LD A+ +FD M V+ 
Sbjct: 105 VLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKD 164

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W ++I G     +    L +   M     + ++ +   +  A S L D    + IH 
Sbjct: 165 GVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHG 224

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           + ++        V  SLI MY   G    A+ VF  +  +D      M+  Y K G    
Sbjct: 225 YVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFE 282

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +   +   + + N     N + V  E   +E+GK+++  A++ G++ +I V   IV 
Sbjct: 283 GLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVC 342

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  ++A  +F ++  R+L++W+A +S  V +G+  + ++ F      G+  D + 
Sbjct: 343 MYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAI 402

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L+ ++ GC+  SN+ LG  +H +AIK    SD+ + T LV +Y +      A  L +   
Sbjct: 403 LSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQ 462

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K    +N +++GF +    D    + +F++ +L+G+ PD  T   L S  A    L  G
Sbjct: 463 IKDIVVWNTLINGFTK--YGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLG 520

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCG---SIDGAFQIFKGISDRDIVSWNAMLSAY 540
             LH    K+G+ +D+ V  AL+ MYAKCG   S++  F + K + D   VSWN M++ Y
Sbjct: 521 TCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDE--VSWNVMIAGY 578

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
             +G    A+  F  MK E   P+ ++ + +L A  Y
Sbjct: 579 LHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSY 615


>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial [Vitis vinifera]
          Length = 673

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 184/563 (32%), Positives = 295/563 (52%), Gaps = 6/563 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---LE 234
           G+Q+HA  IK G  N + +   ++ +Y     F +   +F  +  K+V   N +I   +E
Sbjct: 92  GKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVE 151

Query: 235 YN-KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
            N K     + FH F  ++     PN  T   ++    E   V   +QLH   +K G   
Sbjct: 152 GNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDS 211

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
              VG+A+V  Y K G+ +EA+  FD +S R+L+ W  ++S Y  +G  GKA   F    
Sbjct: 212 NCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMR 271

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
             G+  D+    ++I+ C V  +  LG Q+HG  I+  +  DV + +ALVD+Y+K  +++
Sbjct: 272 LEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIE 331

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            AR   DG   K    +  ++ G+ +    D ++ M L  +       PD +  + +LS 
Sbjct: 332 DARKAFDGMIVKNIVSWTTMIVGYGQH--GDGKEAMRLLQEMIRVYTYPDELALASILSS 389

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
             + +       +HAY ++ G+ A + + NAL++ Y+KCGSI  AFQ F  +++ DI+SW
Sbjct: 390 CGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISW 449

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            +++ AYA HGL K  + +FE+M      PD ++ LGVL AC + G    G+  FN +  
Sbjct: 450 TSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMIN 509

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
           +Y + P  EH+ C++DLLGRAG L EA+NL+ S P           +   K+  N   + 
Sbjct: 510 VYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLAR 569

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
            AS++L  +EP +  ++ L+SNMYA  G   + A+VR  M +    K  GCSW+EI  ++
Sbjct: 570 WASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMEIAGEV 629

Query: 714 HHFVASGKDHPESEEIYSKLDLL 736
           H FV+  K HP + ++Y  LDLL
Sbjct: 630 HTFVSRDKTHPRAVQVYGMLDLL 652



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 217/431 (50%), Gaps = 8/431 (1%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +KIS   G L  G+ +HA ++K G+ N     N ++++Y K    +   K+FD M +++ 
Sbjct: 80  LKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNV 139

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSE----EKFNEHTCSVILEACSLLEDRIFGEQ 180
           ++W +LI G ++     +++ +    +R         N  T + +L A   L D     Q
Sbjct: 140 VSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQ 199

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H F +KSGF++N FVG++L+  Y   G   EA++ F  ++ +D+   N M+  Y   G 
Sbjct: 200 LHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGV 259

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              AF VF  +     + +++TFT++I+ C        GKQ+HGL ++     ++ V +A
Sbjct: 260 QGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASA 319

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V MY K+   E+A + FD +  +N++SWT +I GY + G G +A+    E + +    D
Sbjct: 320 LVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPD 379

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              LA+++  C   S     +Q+H + +++G+ + + +  ALV  Y+K G + SA     
Sbjct: 380 ELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFS 439

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             +      + +++  +       +E V V F +   + + PD V F  +LS  A    +
Sbjct: 440 SVAEPDIISWTSLMGAYAFH-GLSKEGVEV-FEKMLFSNVRPDKVAFLGVLSACAHGGFV 497

Query: 481 VRGRSLHAYSI 491
           + G  LH +++
Sbjct: 498 LEG--LHYFNL 506



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 192/415 (46%), Gaps = 5/415 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++ SI   D+ + + +H F+LKSG  ++ F  + L++ YAKF  +D AQ  FD +  R 
Sbjct: 184 LLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRD 243

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W  ++  Y  +G      G+   M     K +  T + ++ +C +L     G+Q+H 
Sbjct: 244 LVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHG 303

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+  F+ +V V ++L+ MY  +    +A   F G+  K++     MI+ Y + G+ + 
Sbjct: 304 LIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKE 363

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A  +   ++     P++    +++S C       E  Q+H   V+ G    +S+ NA+V+
Sbjct: 364 AMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVS 423

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K G    A + F +++E ++ISWT+L+  Y   G   + +  F + L   +  D   
Sbjct: 424 AYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVA 483

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
              V+  C+    +  GL      I  +  + D    T ++D+  + G L  A  LL   
Sbjct: 484 FLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSM 543

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP-DPVTFSRLLSLSAS 476
             +  ++    L  F+          +  ++ ++L  MEP +P  +S + ++ AS
Sbjct: 544 PVEPRSD---TLGAFLGACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYAS 595



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 25/220 (11%)

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           S  L +SA    L  G+ LHA+ IK G    + + N ++ +Y KC   +   ++F  +  
Sbjct: 77  SHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136

Query: 528 RDIVSWNAMLSAYALHGLGKGALL-----LFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           +++VSWN ++    + G  K AL+      F +M  E  AP+ I++ G+L+A I   L++
Sbjct: 137 KNVVSWNTLICG-VVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIE--LND 193

Query: 583 GGICLFNEIEQIY------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
            GIC      Q++      G        + +VD   + G + EA +  +    S   +LW
Sbjct: 194 VGIC-----RQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVS-SRDLVLW 247

Query: 637 RTLVSVSKL--MANSKFSILASKRLLDLEPKDAGSFILVS 674
             +VS   L  +    F +    +L+ LE     +F   S
Sbjct: 248 NVMVSCYALNGVQGKAFGVF---KLMRLEGVKGDNFTFTS 284


>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 216/743 (29%), Positives = 346/743 (46%), Gaps = 110/743 (14%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLY---AKFNRLDVAQKLFDGML 120
           L+K     G +  G  +HA L+K+G  +  + A  L+ LY    KF  +D   K FDG  
Sbjct: 27  LLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDG-- 84

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               +    +I  Y+  G+                               L++ R+  ++
Sbjct: 85  -SDLVVSNCMISAYVQWGN-------------------------------LVQARLLFDE 112

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +         E N    ++LIS     G   E+   F    +++V      I  + + G 
Sbjct: 113 MP--------ERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGL 164

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +  A  +F  LL S   PND TFT+V+  C E      G  + GL VK G    +SV N+
Sbjct: 165 NFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNS 224

Query: 301 IVTM-------------------------------YGKHGMSEEAERMFDAISERNLISW 329
           ++T+                               Y + G   EA R+FD + ERN ISW
Sbjct: 225 LITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISW 284

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           +A+I+ Y +SG+  +A+  F + +  G   + SC A  +   +    L  G+ +HG   K
Sbjct: 285 SAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTK 344

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLD---------------GFSC---------- 424
            G   DV +G++L+D+Y K G     R++ D               G+S           
Sbjct: 345 IGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEEL 404

Query: 425 ------KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                 K    +  I++G++E   +  E V+ +F+   ++G  P+  TFS +L   AS A
Sbjct: 405 FELIPEKNDVSWGTIIAGYLEN--EQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIA 462

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L +G ++H   IK G   D+ VG AL  MYAKCG I  + Q+F+ + +++ +SW  M+ 
Sbjct: 463 SLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQ 522

Query: 539 AYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
             A  G    +L+LFEEM+R    AP+++ +L VL AC + GL + G+  FN +E++YG+
Sbjct: 523 GLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGI 582

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
           +P  +H+ C+VDLL R+GRL EA   I + PF      W  L+S  K   + K +   +K
Sbjct: 583 KPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAK 642

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +L  L   ++  ++L+SN+YA  G   + + +R  M +  L K  GCSW+E+ +++H F 
Sbjct: 643 KLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFY 702

Query: 718 ASGKDHPESEEIYSKLDLLNDEM 740
           +    H +S EIY  L LL  EM
Sbjct: 703 SEDGSHSQSNEIYGTLQLLRSEM 725


>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 757

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 194/672 (28%), Positives = 349/672 (51%), Gaps = 7/672 (1%)

Query: 74  LKLGQAVHAFLLKSGSQN---DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           L LG  VH  LL S   N   +T   N+LI +Y +    + A+ +FD M  ++ ++W S+
Sbjct: 54  LCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASV 113

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  +  +      LG+   M RS    ++      + AC+ L D   G Q+HA A+KS  
Sbjct: 114 IAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSEN 173

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            +++ V  +L++MY  SG   +   +F  +  KD      +I  + + G    A  +F  
Sbjct: 174 GSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFRE 233

Query: 251 LLSSDFE-PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           +++     PN++ F +V S C     +E G+Q+H L+VK+ +      G ++  MY +  
Sbjct: 234 MVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCK 293

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E A+R+F  I   +L+SW ++I+     G   +A+    E    G+  D   +  ++ 
Sbjct: 294 KLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLC 353

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C  C  ++ G  +H + +K G   DV +  +L+ +YA+  D  SA  +      +    
Sbjct: 354 ACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVT 413

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N+IL+  ++      E V  LF+  + +    D ++ + +LS SA        + +H  
Sbjct: 414 WNSILTACVQH--QHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTC 471

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHGLGKG 548
           + K G   D ++ N LI  YAKCGS+D A ++F+ + ++ D+ SW++++  YA  G  + 
Sbjct: 472 TFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRK 531

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF  M+  G  P+ ++ +GVL AC   GL + G   ++ +E  +G+ P  EH +C++
Sbjct: 532 ALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVI 591

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLL RAGRL+EA   ++  PF    ++W+TL++ SK   + +    A++ +L+++P  + 
Sbjct: 592 DLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSA 651

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++L+ N+Y+  G  +E A+++  M    + K  G SW+++  +L  F+   + HPESEE
Sbjct: 652 AYVLLCNIYSASGDWNEFARLKKAMRSSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEE 711

Query: 729 IYSKLDLLNDEM 740
           IY+ L+L+  EM
Sbjct: 712 IYTMLELVGMEM 723



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 212/478 (44%), Gaps = 10/478 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GD+ +G+ VHA  +KS + +D    N L+ +Y+K   +     LF  M  +  I+W S+I
Sbjct: 156 GDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSII 215

Query: 132 KGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            G+   G     L I  +M        NE     +  AC +L    +GEQIH+ ++K   
Sbjct: 216 AGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRL 275

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           ++N + G SL  MY        A+ VF G+   D+   N +I   +  G    A  +   
Sbjct: 276 DHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSE 335

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  S   P+  T   ++  C     ++ G+ +H   VK G+  ++SV N++++MY +   
Sbjct: 336 MRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMD 395

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A  +F    +R++++W ++++  V+  H       F          D   L  V+  
Sbjct: 396 FSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSA 455

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA-E 429
            +     E+  Q+H    K G ++D  L   L+D YAK G L  A  L +          
Sbjct: 456 SAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFS 515

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +++++ G+ +  +      + LF++ R  G+ P+ VTF  +L+ + S+  LV     + Y
Sbjct: 516 WSSLIVGYAQ--SGYPRKALDLFARMRNLGVRPNHVTFVGVLT-ACSRVGLV-DEGCYYY 571

Query: 490 SI---KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           SI   + G        + +I + A+ G +  A +    +  + DIV W  +L+    H
Sbjct: 572 SIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTH 629



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 3/270 (1%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           +G   ++ G+ +H++L+K G   D    N+L+++YA+      A  +F     R  +TW 
Sbjct: 356 VGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWN 415

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           S++   +     E V  +   + RS    +  + + +L A + L      +Q+H    K 
Sbjct: 416 SILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKV 475

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHV 247
           G  N+  +   LI  Y   G   +A  +F  +    DV   + +I+ Y ++G    A  +
Sbjct: 476 GLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDL 535

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVGNAIVTMYG 306
           F  + +    PN  TF  V++ C     V+EG   +  +  + GV+      + ++ +  
Sbjct: 536 FARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLA 595

Query: 307 KHGMSEEAERMFDAIS-ERNLISWTALISG 335
           + G   EA +  D +  E +++ W  L++G
Sbjct: 596 RAGRLTEAAKFVDQMPFEPDIVMWKTLLAG 625


>gi|413944451|gb|AFW77100.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 678

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 191/639 (29%), Positives = 327/639 (51%), Gaps = 11/639 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
            +VH   +K G    TF  NNL+  Y +      A++LFD M  R+ ++W+ +I G    
Sbjct: 26  HSVHGVAIKLGCIVSTFLCNNLLYAYLRRQVPADARRLFDEMPRRNLVSWSVVISGSAHH 85

Query: 138 GDYESVLGIACDM-----YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G       +   M     + S ++ +  T   ++  CS   D   G Q+HA   K G + 
Sbjct: 86  GVLAEAFALFSHMLHGAGHGSWDRPDSFTLGALVAGCSRARDVDAGMQVHACVAKFGVDE 145

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---LEYNKAGESEMAFHVFV 249
           +  V  +L+ MY   G    +   F     + V     MI   +    +G  + +  +F 
Sbjct: 146 DDSVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYYDTSLLLFK 205

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +L+    P + T++ ++ V      +  G QLHG  +K G   + ++G A++TMYG+ G
Sbjct: 206 KMLALKVWPTNATYSCILKVFDTPDLLSVGMQLHGCLLKMGTEVDTALGTALMTMYGRCG 265

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             +E  R+   I   + +S TAL+  Y R+G+  +AI  F E +   +  D S +  ++ 
Sbjct: 266 GVDEIPRLACRI-RHDALSRTALLGAYARTGYNAEAIGVFKEMIMKNMAIDQSAMTGMLQ 324

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS    L +  Q+H +A+K  +  D  L  A + +Y + GD+ SA  +           
Sbjct: 325 VCSSFGQLRMVRQVHCYALKTFFKLDTLLLNATITVYGRCGDINSAETVFYLMEENDIIS 384

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A+L+ + +   D+E  V++ F +    G+       + +L  S+S + L  G  +H+ 
Sbjct: 385 WTALLTCYTQNGLDEE--VLLFFRKMLRKGLGSPVFCITSVLRASSSISNLAVGLQIHSR 442

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           ++K G   D  V NAL+T+YA CGS+  A +IF  +S+RDIV+WNA+L++++ HG    A
Sbjct: 443 TLKLGIDDDNSVQNALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGSEVAA 502

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           + LF+ M+ EG  PD  + +G+L +C   GL + G   FNE+++ Y L P + H+ CMVD
Sbjct: 503 IQLFDLMQEEGICPDAYTFVGLLSSCSRMGLVKEGCEYFNEMKEKYNLEPKMVHYTCMVD 562

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LL RAGR  +AM+ I++ P+    +LW  L++  K+  N     +A+K++L++ P D  +
Sbjct: 563 LLARAGRFCDAMDFIDAMPYEPDQILWEALLASCKVHGNLGLGRIAAKKILEITPHDYSA 622

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           +I++S+++A   M DE    RT  +  R  K+ G SWI+
Sbjct: 623 YIILSSIHASVDMWDEKYWNRTVFDTQRARKDTGRSWID 661



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 229/485 (47%), Gaps = 11/485 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D+  G  VHA + K G   D   A  L+++YAK   +D + + F     RS ++WTS+I 
Sbjct: 127 DVDAGMQVHACVAKFGVDEDDSVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTSMIA 186

Query: 133 GYLDDGD---YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
             ++ G    Y++ L +   M   +      T S IL+     +    G Q+H   +K G
Sbjct: 187 CLVNQGSSGYYDTSLLLFKKMLALKVWPTNATYSCILKVFDTPDLLSVGMQLHGCLLKMG 246

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E +  +GT+L++MY   G   E   +   + + D      ++  Y + G +  A  VF 
Sbjct: 247 TEVDTALGTALMTMYGRCGGVDEIPRLACRIRH-DALSRTALLGAYARTGYNAEAIGVFK 305

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            ++  +   +    T ++ VC     +   +Q+H  A+K     +  + NA +T+YG+ G
Sbjct: 306 EMIMKNMAIDQSAMTGMLQVCSSFGQLRMVRQVHCYALKTFFKLDTLLLNATITVYGRCG 365

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               AE +F  + E ++ISWTAL++ Y ++G   + +  F + L  G+     C+ +V+ 
Sbjct: 366 DINSAETVFYLMEENDIISWTALLTCYTQNGLDEEVLLFFRKMLRKGLGSPVFCITSVLR 425

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             S  SNL +GLQ+H   +K G   D  +  ALV +YA  G ++ A  + +  S +    
Sbjct: 426 ASSSISNLAVGLQIHSRTLKLGIDDDNSVQNALVTLYANCGSVQVALKIFNSMSNRDIVT 485

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA+L+ F +     E   + LF   +  G+ PD  TF  LLS S S+  LV+    +  
Sbjct: 486 WNALLTSFSQH--GSEVAAIQLFDLMQEEGICPDAYTFVGLLS-SCSRMGLVKEGCEYFN 542

Query: 490 SIKTGYAAD--VIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG-L 545
            +K  Y  +  ++    ++ + A+ G    A      +  + D + W A+L++  +HG L
Sbjct: 543 EMKEKYNLEPKMVHYTCMVDLLARAGRFCDAMDFIDAMPYEPDQILWEALLASCKVHGNL 602

Query: 546 GKGAL 550
           G G +
Sbjct: 603 GLGRI 607



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 131/273 (47%), Gaps = 2/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++++    G L++ + VH + LK+  + DT   N  I +Y +   ++ A+ +F  M    
Sbjct: 322 MLQVCSSFGQLRMVRQVHCYALKTFFKLDTLLLNATITVYGRCGDINSAETVFYLMEEND 381

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+WT+L+  Y  +G  E VL     M R          + +L A S + +   G QIH+
Sbjct: 382 IISWTALLTCYTQNGLDEEVLLFFRKMLRKGLGSPVFCITSVLRASSSISNLAVGLQIHS 441

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G +++  V  +L+++Y + G  + A  +F  ++ +D+   N ++  +++ G    
Sbjct: 442 RTLKLGIDDDNSVQNALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGSEVA 501

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIV 302
           A  +F  +      P+ YTF  ++S C     V+EG +  + +  K+ +  ++     +V
Sbjct: 502 AIQLFDLMQEEGICPDAYTFVGLLSSCSRMGLVKEGCEYFNEMKEKYNLEPKMVHYTCMV 561

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
            +  + G   +A    DA+  E + I W AL++
Sbjct: 562 DLLARAGRFCDAMDFIDAMPYEPDQILWEALLA 594


>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
 gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/658 (30%), Positives = 327/658 (49%), Gaps = 5/658 (0%)

Query: 51  CSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD 110
           C+E  +    +P +++   G GD+ +G  VH  ++K G  ND F   +L+ LY +   L 
Sbjct: 92  CNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCLT 151

Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
            A+K+FD + VR  ++W+S+I  Y+D G+    L +   +     K +      + EACS
Sbjct: 152 DARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACS 211

Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
            L      + IH + ++   +    +  SLI MY        AE +F  +A K       
Sbjct: 212 KLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTS 271

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
           MI  YN++G  + AF +FV +L    EPN  T   V+  C     + EGK +H  A+K G
Sbjct: 272 MIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKG 331

Query: 291 VV-REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           +  ++  +G  ++ +Y   G     E++  AI ERN++SW  L+S   R G   +A+  F
Sbjct: 332 MTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLF 391

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
           ++    G+  D   L++ I  C    +L+LG Q+HG+AIK   L +  +  AL+ +Y++ 
Sbjct: 392 VQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILGEF-VKNALIGMYSRC 450

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G   SA M+ +    K +  +N+I+SGF++  + +  + + L  Q  L  ++   V F  
Sbjct: 451 GFSDSAYMIFNDIKQKSSVAWNSIISGFVQ--SGNSIEAIHLVDQMYLNCLKITDVVFLS 508

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
            +   A   CL +G+ LH   I  G   D+ +  AL  MYAKCG +  A  +F  +S++ 
Sbjct: 509 AIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKS 568

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           +VSW+AM+S Y +HG    A+  F +M   G  P+ I+ + +L AC +SG  E G   F+
Sbjct: 569 VVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFD 628

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            +   +G+ P  EHFAC+VDLL RAG ++ A  +INS PF     +   L++  ++    
Sbjct: 629 LMRD-FGVEPSSEHFACLVDLLSRAGDVNGAYKIINSMPFPADASVLGNLLNGCRIHQRM 687

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
                  K LL +   D G + L+SN+YA  G        R  M      K  G S I
Sbjct: 688 DMIPEIEKDLLKIRTSDTGHYSLLSNIYAEIGNWAARENTRGIMERSGYKKVPGYSAI 745



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 263/564 (46%), Gaps = 8/564 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA L  +   N    +  LI  YA+   +  +  +F+      +  W  LIK ++    
Sbjct: 20  LHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLIKCHVWSHA 79

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
           +E  + +   M  +E +        +L AC+   D   G ++H   IK GF+N+ F+ TS
Sbjct: 80  FEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIETS 139

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ +Y   GC  +A  VF  +  +D+   + +I  Y   GE+  A  +F  L++   + +
Sbjct: 140 LLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLD 199

Query: 260 DYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
                +V   C   LG+ +  K +HG  V+  V    ++ N+++ MY        AER+F
Sbjct: 200 WVIMLSVTEAC-SKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIF 258

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
             ++ +  ISWT++I  Y RSG   +A   F++ L+L +  +   +  V+  CS  S L 
Sbjct: 259 VNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLR 318

Query: 379 LGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
            G  +H +A+K G    D  LG  L+++YA  G L     +L     +    +N +LS  
Sbjct: 319 EGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLS-- 376

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           +       E+ +VLF Q +  G+  D  + S  +S   +   L  GR +H Y+IK     
Sbjct: 377 INARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILG 436

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           +  V NALI MY++CG  D A+ IF  I  +  V+WN+++S +   G    A+ L ++M 
Sbjct: 437 E-FVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMY 495

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
                  D+  L  +QAC      E G  L +++  +YG+   L     + D+  + G L
Sbjct: 496 LNCLKITDVVFLSAIQACADMVCLEKGKWLHHKL-IMYGVEKDLYIETALTDMYAKCGDL 554

Query: 618 SEAMNLINSSPFSESPLLWRTLVS 641
             A  + +S    +S + W  ++S
Sbjct: 555 RTAEGVFHSMS-EKSVVSWSAMIS 577



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 2/202 (0%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           C  L    QLH         +  +  T L++ YA+ G +KS+ ++ + +    +  +  +
Sbjct: 11  CKTLRQLNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVL 70

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +   +   A   E+ ++L+ +      +     F  +L   A    +  G  +H   IK 
Sbjct: 71  IKCHVWSHA--FEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKC 128

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+  D  +  +L+ +Y + G +  A ++F  I  RD+VSW++++S+Y   G    AL +F
Sbjct: 129 GFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMF 188

Query: 554 EEMKREGFAPDDISILGVLQAC 575
             +  E    D + +L V +AC
Sbjct: 189 RLLVNERVKLDWVIMLSVTEAC 210


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 186/585 (31%), Positives = 309/585 (52%), Gaps = 28/585 (4%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+AC+       G ++H FA K+GF ++VFV  +L++MY   GC   A  VF  +  +D
Sbjct: 94  LLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERD 153

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     M+  Y ++     A  +   +     + +     ++I+V    L ++ G+ +HG
Sbjct: 154 VVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHG 213

Query: 285 LAVK-FGVVR-EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
             V+  G  + E+S+  A++ MY K G    A+R+FD +S+R+++SWT +I+G +RS   
Sbjct: 214 YIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRL 273

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +    F   L+  +  +   L ++I  C     L+LG   H + +++G+   + L TAL
Sbjct: 274 DEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTAL 333

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+Y K G +  AR L +G   K    ++ ++S +      D+  V  LF +     ++P
Sbjct: 334 IDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQ--VFNLFVEMLNNDVKP 391

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           + VT   LLSL A    L  G+  HAY  + G   DVI+  ALI MYAKCG +  A  +F
Sbjct: 392 NNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLF 451

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
                RDI  WN M++ +++HG GK AL LF EM+  G  P+DI+ + +  AC +SGL  
Sbjct: 452 NEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL-- 509

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
                             +EH+ C+VDLLGRAG L EA N+I + P   + ++W  L++ 
Sbjct: 510 ------------------MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAA 551

Query: 643 SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
            KL  N     +A++++L+L+P++ G  +L SN+YA     ++   VR  M+   + KE 
Sbjct: 552 CKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEP 611

Query: 703 GCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDS 747
           G SWIE+   +HHF +  K   ++ ++Y  +     EM +K+++S
Sbjct: 612 GLSWIEVSGSVHHFKSGDKACTQTTKVYEMV----TEMCIKLRES 652



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 245/535 (45%), Gaps = 25/535 (4%)

Query: 13  PFKSQQSLPP-LKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGS 71
           PF SQ    P     + I++++ N   Q ++ C +   S     L     P L+K    +
Sbjct: 42  PFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQA 101

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
               LG+ +H F  K+G  +D F  N L+N+Y K   L  A+ +FD M  R  ++WT+++
Sbjct: 102 SSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTML 161

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GF 190
             Y+    +   L +  +M     K +      ++     L D   G  +H + +++ G 
Sbjct: 162 GCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGD 221

Query: 191 EN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           E   V + T+LI MY   GC   A+ +F  L+ + V     MI    ++   +     F 
Sbjct: 222 EKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFN 281

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +L     PN+ T  ++I+ C     ++ GK  H   ++ G    +++  A++ MYGK G
Sbjct: 282 RMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCG 341

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A  +F+ + ++++  W+ LIS Y       +  N F+E L+  +  ++  + +++ 
Sbjct: 342 QVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLS 401

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+    L+LG   H +  +HG   DV L TAL+++YAK GD+  AR L +    +    
Sbjct: 402 LCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRM 461

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +N +++GF   +    ++ + LFS+    G+EP+ +TF     +S   AC   G   H  
Sbjct: 462 WNTMMAGF--SMHGCGKEALELFSEMESHGVEPNDITF-----VSIFHACSHSGLMEHY- 513

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
                          L+ +  + G +D A  I + +  R + + W A+L+A  LH
Sbjct: 514 -------------GCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLH 555



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 221/468 (47%), Gaps = 31/468 (6%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+HA  IK+ F N           +F    F    N             N +I  Y   
Sbjct: 26  HQLHAHFIKTQFHNP--------HPFFSQSHFTPEANY------------NLLISSYTNN 65

Query: 239 GESEMAFHVFVHLLSSDFEP-NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
              + +F+ ++H+ S+D    +++   +++  C +    + G++LHG A K G   ++ V
Sbjct: 66  HLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFV 125

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA++ MY K G    A  +FD + ER+++SWT ++  YVRS   G+A+    E   +G+
Sbjct: 126 CNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGV 185

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGGDLKSA 415
                 L ++I       +++ G  +HG+ +++      +V + TAL+D+Y KGG L SA
Sbjct: 186 KLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASA 245

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           + L D  S +    +  +++G +     DE      F++     + P+ +T   L++   
Sbjct: 246 QRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKN--FNRMLEEKLFPNEITLLSLITECG 303

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
               L  G+  HAY ++ G+   + +  ALI MY KCG +  A  +F G+  +D+  W+ 
Sbjct: 304 FVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSV 363

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ++SAYA          LF EM      P++++++ +L  C  +G  + G      I + +
Sbjct: 364 LISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINR-H 422

Query: 596 GLR--PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           GL    ILE    ++++  + G ++ A +L N +       +W T+++
Sbjct: 423 GLEVDVILE--TALINMYAKCGDVTIARSLFNEA-MQRDIRMWNTMMA 467


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 168/496 (33%), Positives = 278/496 (56%), Gaps = 8/496 (1%)

Query: 252 LSSDFEPNDYTFTN-VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L   + P D  F N ++  C     + +G+ +HG  ++     ++ + N ++ MY K G 
Sbjct: 42  LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS 101

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            EEA ++FD + ER+ ++WT LISGY +      A+  F + L  G   +   L++VI  
Sbjct: 102 LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKA 161

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            +       G QLHGF +K G+ S+V +G+AL+D+Y + G +  A+++ D    +    +
Sbjct: 162 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 221

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           NA+++G   +     E  + LF      G  P   +++ L    +S   L +G+ +HAY 
Sbjct: 222 NALIAGHARRCG--TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 279

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK+G       GN L+ MYAK GSI  A +IF  ++ RD+VSWN++L+AYA HG G  A+
Sbjct: 280 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAV 339

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
             FEEM+R G  P++IS L VL AC +SGL + G   + E+ +  G+     H+  +VDL
Sbjct: 340 CWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVLEAWHYVTIVDL 398

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGRAG L+ A+  I   P   +  +W+ L++  ++  N++    A++ + +L+P D G  
Sbjct: 399 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 458

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           +++ N+YA  G  ++AA+VR  M +  + KE  CSW+EI++ +H FVA+ + HP+ EEI 
Sbjct: 459 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 518

Query: 731 SKLDLLNDEMKLKVKD 746
            K     +E+  K+K+
Sbjct: 519 RKW----EEVLAKIKE 530



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 192/390 (49%), Gaps = 3/390 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ VH  L++S  ++D    N L+N+YAK   L+ A+K+FD M  R  +TWT+LI G
Sbjct: 67  LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y         L +   M R     NE T S +++A +       G Q+H F +K GF++N
Sbjct: 127 YSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 186

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V VG++L+ +Y   G   +A+ VF  L  ++    N +I  + +   +E A  +F  +L 
Sbjct: 187 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLR 246

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
             F P+ +++ ++   C     +E+GK +H   +K G       GN ++ MY K G   +
Sbjct: 247 EGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 306

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++FD +++R+++SW +L++ Y + G G +A+  F E    GI  +     +V+  CS 
Sbjct: 307 ARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSH 366

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              L+ G   +    K G + +      +VD+  + GDL  A   ++    + TA   AI
Sbjct: 367 SGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTA---AI 423

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
               +      +   +  ++ + +  ++PD
Sbjct: 424 WKALLNACRMHKNTELGAYAAEHVFELDPD 453



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 193/409 (47%), Gaps = 3/409 (0%)

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           +D D ES+   + D+  S    +    + +L+ C++ +    G  +H   I+S F +++ 
Sbjct: 28  EDSDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLV 87

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +  +L++MY   G   EA  VF  +  +D      +I  Y++      A  +F  +L   
Sbjct: 88  MNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFG 147

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           F PN++T ++VI           G QLHG  VK G    + VG+A++ +Y ++G+ ++A+
Sbjct: 148 FSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ 207

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +FDA+  RN +SW ALI+G+ R     KA+  F   L  G        A++   CS   
Sbjct: 208 LVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTG 267

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            LE G  +H + IK G       G  L+D+YAK G +  AR + D  + +    +N++L+
Sbjct: 268 FLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLT 327

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
            + +    +E   +  F + R  G+ P+ ++F  +L+  +    L  G   +    K G 
Sbjct: 328 AYAQHGFGNE--AVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGI 385

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
             +      ++ +  + G ++ A +  + +      + W A+L+A  +H
Sbjct: 386 VLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 434



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 55/100 (55%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+ G+ VHA+++KSG +   F  N L+++YAK   +  A+K+FD +  R  ++W SL
Sbjct: 266 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 325

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           +  Y   G     +    +M R   + NE +   +L ACS
Sbjct: 326 LTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACS 365


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 197/673 (29%), Positives = 346/673 (51%), Gaps = 10/673 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  V + ++ SG Q     AN+LI++     R+  A+KLF  M  R  ++W +L+  Y  
Sbjct: 164 GLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSH 223

Query: 137 DGDYESVLGIACDMYRSEEKFNEHT--CSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           +G       +  DM R     ++ T  CS+I   C+  +   +G  +H+  +++G  + +
Sbjct: 224 EGLCSKSFRVFSDMRRGGLLRHDATTLCSLI-SVCASSDYVSYGSGVHSLCLRTGLHSYI 282

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            V  +L++MY  +G   +AE +F  ++ +D+   N MI  Y + G +  A      LL +
Sbjct: 283 PVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHT 342

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
           +  P+  TF++ +  C     + +G+ +H + ++  +   + VGN+++TMYGK    E+A
Sbjct: 343 NEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDA 402

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
           ER+F  +   +++S   LI  Y     G KA+  F       +  +   +  ++   +  
Sbjct: 403 ERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSS 462

Query: 375 SNLE-LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           ++L   GL LH + I  G+LSD  +  +L+ +YAK GDL+S+  +      +    +NA+
Sbjct: 463 NDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAM 522

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++  ++      E+ + LF   R  G   D +  +  +S SAS A L  G  LH   +K 
Sbjct: 523 IAANVQH--GHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKC 580

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G   D  V NA + MY KCG +D   ++    + R    WN ++S YA +G  K A   F
Sbjct: 581 GLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETF 640

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           + M   G  PD ++ + +L AC ++GL + GI  +N +  ++G+ P ++H  C+VD+LGR
Sbjct: 641 KHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGR 700

Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
            GR +EA   I   P   + L+WR+L+S S+   N      A+KRLL+L+P D  +++L+
Sbjct: 701 LGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLL 760

Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           SN+YA      +  +VR+ M  + L+K   CSW++   ++  F      H  +++IY KL
Sbjct: 761 SNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKL 820

Query: 734 DLLNDEMKLKVKD 746
               DE+ LK+++
Sbjct: 821 ----DEILLKLRE 829



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 162/571 (28%), Positives = 275/571 (48%), Gaps = 14/571 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G A+HA   K+G   + +    L++LY     +  AQ+LF  M  R+ ++WT+L+     
Sbjct: 63  GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  E  LG    M R     N +  + ++  C  LED + G Q+ +  I SG +  V V
Sbjct: 123 NGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSV 182

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             SLISM  + G   +AE +F  +  +D    N ++  Y+  G    +F VF  +     
Sbjct: 183 ANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGL 242

Query: 257 EPND-YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
             +D  T  ++ISVC  +  V  G  +H L ++ G+   I V NA+V MY   G   +AE
Sbjct: 243 LRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAE 302

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F  +S R+LISW  +IS YV++G+   A+    + L      D    ++ +  CS   
Sbjct: 303 FLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPG 362

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L  G  +H   ++     ++ +G +L+ +Y K   ++ A  +            N ++ 
Sbjct: 363 ALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIG 422

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYSIKTG 494
            +   + +D    M +F   R   ++ + +T   +L S ++S      G  LHAY+I  G
Sbjct: 423 SY--AVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAG 480

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           + +D  V N+LITMYAKCG ++ +  +F+ I +R +VSWNAM++A   HG G+ +L LF 
Sbjct: 481 FLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFM 540

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV----DL 610
           +M+ +G   D I +   + +       E G+ L        GL+  L + + +V    D+
Sbjct: 541 DMRHDGNGLDHICLAECMSSSASLASLEEGMQLHG-----LGLKCGLGNDSHVVNAAMDM 595

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
            G+ G++ E + ++   P       W TL+S
Sbjct: 596 YGKCGKMDEMLKML-PDPAIRPQQCWNTLIS 625



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 221/453 (48%), Gaps = 4/453 (0%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED-RIFGEQ 180
           R+  +W + I G +  G   +   +   M       +    + ++ AC   E+ R  G  
Sbjct: 6   RTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAA 65

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IHA   K+G   NV++GT+L+ +Y       +A+ +F  +  ++V     +++  +  G 
Sbjct: 66  IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            E A   +  +       N   F  V+S+C        G Q+    +  G+ R++SV N+
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANS 185

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-C 359
           +++M G  G   +AE++F  + ER+ +SW AL+S Y   G   K+   F +    G+   
Sbjct: 186 LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRH 245

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D++ L ++I  C+    +  G  +H   ++ G  S + +  ALV++Y+  G L  A  L 
Sbjct: 246 DATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLF 305

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
              S +    +N ++S +++    +  D +    Q       PD +TFS  L   +S   
Sbjct: 306 WNMSRRDLISWNTMISSYVQN--GNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGA 363

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L+ GR +HA +++     +++VGN+LITMY KC SI+ A +IF+ + + D+VS N ++ +
Sbjct: 364 LMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGS 423

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           YA+   G  A+ +F  M+R     + I+I+ +L
Sbjct: 424 YAVLEDGTKAMQVFFWMRRGEVKLNYITIVNIL 456


>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
          Length = 549

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 167/520 (32%), Positives = 287/520 (55%), Gaps = 11/520 (2%)

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           +V   N +I  +   G  E  F  +  + +    P+ +TF   I  C   L V E K++H
Sbjct: 23  NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKAC---LDVLEIKKIH 79

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           GL  KFG+  ++ +G+A+V  Y K G+ E A+  F+ +  R+++ W A+++GY + G   
Sbjct: 80  GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFE 139

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
             +  F    D  +      +  ++   +V  +L  G  +HGFA+K GY S V +  +L+
Sbjct: 140 MVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 199

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D+Y K   ++ A  + +    K    +N+I S  + +   D +  + L  +   AG++PD
Sbjct: 200 DMYGKCKCIEDALEIFEMMREKDIFSWNSIXS--VHEQCGDHDGTLRLLDRMLGAGIQPD 257

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD------VIVGNALITMYAKCGSIDG 517
            VT + +L   +  A L+ GR +H Y I +G   D      V++ NA+I MYAKCGS+  
Sbjct: 258 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 317

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F+ + ++D+ SWN M+  Y +HG G  AL +F  M      PD+++ +GVL AC +
Sbjct: 318 AHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSH 377

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           +G    G     +++  Y + P +EH+ C++D+LGRAG+L EA  L  + P   +P++WR
Sbjct: 378 AGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWR 437

Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
            L++  +L  ++  + +A++R+ +LEP+  GS++L+SN+Y   G  +E  +VR TM    
Sbjct: 438 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQN 497

Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           + K  GCSWIE+ + +H FV++ + HPE+  IY+ L+ L 
Sbjct: 498 VRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNSLT 537



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 221/453 (48%), Gaps = 18/453 (3%)

Query: 102 LYAKFNRLDVAQKLF-DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
           +Y+K N+++ A  +F D     +   + ++I G++ +G  E        M       ++ 
Sbjct: 1   MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60

Query: 161 TCSVILEAC-SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
           T    ++AC  +LE +    +IH    K G E +VF+G++L++ Y   G    A+  F  
Sbjct: 61  TFPCAIKACLDVLEIK----KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEE 116

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           L  +DV   N M+  Y + G+ EM    F  +      P+ +T T ++SV      +  G
Sbjct: 117 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG 176

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           + +HG A+K G    ++V N+++ MYGK    E+A  +F+ + E+++ SW ++ S + + 
Sbjct: 177 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQC 236

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY------L 393
           G     +      L  GI  D   + TV+  CS  + L  G ++HG+ I  G       +
Sbjct: 237 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 296

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
            DV L  A++D+YAK G ++ A ++ +    K  A +N ++ G+      +E   + +FS
Sbjct: 297 DDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNE--ALEMFS 354

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY--AADVIVGNALITMYAK 511
           +     ++PD VTF  +LS  +    + +GR+  A  +K+ Y  A  +     +I M  +
Sbjct: 355 RMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLA-QMKSKYDVAPTIEHYTCVIDMLGR 413

Query: 512 CGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            G +D A+++   +  + + V W A+L+A  LH
Sbjct: 414 AGQLDEAYELALTMPIEANPVVWRALLAACRLH 446



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 160/345 (46%), Gaps = 7/345 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +H  L K G + D F  + L+N Y KF  ++ AQ  F+ + +R  + W +++ GY   
Sbjct: 76  KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQI 135

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G +E VL     M       +  T + IL   +++ D   G  IH FA+K G+++ V V 
Sbjct: 136 GQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVS 195

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            SLI MY    C  +A  +F  +  KD+   N +   + + G+ +    +   +L +  +
Sbjct: 196 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQ 255

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV------VREISVGNAIVTMYGKHGMS 311
           P+  T T V+  C     +  G+++HG  +  G+      + ++ + NA++ MY K G  
Sbjct: 256 PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSM 315

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +A  +F+ +  +++ SW  +I GY   G+G +A+  F    ++ +  D      V+  C
Sbjct: 316 RDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 375

Query: 372 SVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           S    +  G   L     K+     +   T ++D+  + G L  A
Sbjct: 376 SHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEA 420



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 8/272 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL  G+ +H F +K G  +    +N+LI++Y K   ++ A ++F+ M  +   +W S+ 
Sbjct: 171 GDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIX 230

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             +   GD++  L +   M  +  + +  T + +L ACS L   + G +IH + I SG  
Sbjct: 231 SVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG 290

Query: 192 ------NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
                 ++V +  ++I MY   G  R+A  VF  +  KDV   N MI+ Y   G    A 
Sbjct: 291 KDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEAL 350

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTM 304
            +F  +     +P++ TF  V+S C     V +G+  L  +  K+ V   I     ++ M
Sbjct: 351 EMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDM 410

Query: 305 YGKHGMSEEA-ERMFDAISERNLISWTALISG 335
            G+ G  +EA E       E N + W AL++ 
Sbjct: 411 LGRAGQLDEAYELALTMPIEANPVVWRALLAA 442


>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 187/633 (29%), Positives = 334/633 (52%), Gaps = 7/633 (1%)

Query: 114 KLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
           +LFD M  R +++W ++I GY   G  E+   +  DM R     + ++ S +L+  +  +
Sbjct: 2   RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61

Query: 174 DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
               GEQ+H   +K G+E NV+VG+SL+ MY       +A   F  +   +    N +I 
Sbjct: 62  RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121

Query: 234 EYNKAGESEMAFHVF-VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
            + +  +++ AF +  +  + +    +D TF  ++++  + +     KQ+H   +K G+ 
Sbjct: 122 GFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLE 181

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLE 351
            EI++ NA+++ Y   G+  +A+R+FD +   ++LISW ++I+G  +      A   F E
Sbjct: 182 HEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTE 241

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK--G 409
                I  D      ++  CS   +   G  LHG  IK G      +  AL+ +Y +   
Sbjct: 242 MHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPT 301

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G +K A  L +    K    +N+I++GF +      ED +  F   R + +E D   FS 
Sbjct: 302 GVMKDALSLFESLKPKDLVSWNSIMTGFSQN--GLSEDAVKFFRYLRSSNIEVDDYAFSA 359

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR- 528
           +L   +  A L  G+  HA + K+ + ++  V ++LI MY+KCG I+ A + F+ IS + 
Sbjct: 360 VLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKH 419

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           + ++WNAM+  YA HG G+ +L LF +M  +    D ++   +L AC ++GL + G+ L 
Sbjct: 420 NTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 479

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
           N +E +Y ++P +EH+A  VDLLGRAG +++   LI S P +  P++ +T + V +    
Sbjct: 480 NSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGE 539

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            + +   +  LL++EP+D  +++ +S+MY+     +E A V+  M +  + K  G SWIE
Sbjct: 540 IEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWIE 599

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           I ++++ F A  + H  S+EIY  ++ L  EM+
Sbjct: 600 IRNQVNAFNAEDRSHSLSKEIYLMIEDLTQEMQ 632



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 233/432 (53%), Gaps = 13/432 (3%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           +L+K    +    LG+ VH  ++K G + + +  ++L+++YAK  R++ A   F  +L  
Sbjct: 52  RLLKGIASAKRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEP 111

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFG--- 178
           ++++W +LI G++   D ++   +   M  ++    ++ T + +L   +LL+D +F    
Sbjct: 112 NSVSWNALIAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLL---TLLDDPMFCNLL 168

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL-AYKDVRCVNFMILEYNK 237
           +Q+HA  +K G E+ + +  ++IS Y + G   +A+ VF GL   KD+   N MI   +K
Sbjct: 169 KQVHAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSK 228

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
             + E AF +F  +  +  E + YT+T ++S C        GK LHGL +K G+ +  SV
Sbjct: 229 HEQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSV 288

Query: 298 GNAIVTMYGKH--GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            NA+++MY +   G+ ++A  +F+++  ++L+SW ++++G+ ++G    A+  F      
Sbjct: 289 SNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSS 348

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            I  D    + V+  CS  + L+LG Q H  A K  + S+  + ++L+ +Y+K G +++A
Sbjct: 349 NIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENA 408

Query: 416 RMLLDGFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           R   +  S K+ T  +NA++ G+ +  +   +  + LFSQ     ++ D VTF+ +L+  
Sbjct: 409 RKCFEQISSKHNTIAWNAMILGYAQHGSG--QVSLDLFSQMCNQNVKLDHVTFTAILTAC 466

Query: 475 ASQACLVRGRSL 486
           +    +  G  L
Sbjct: 467 SHTGLIQEGLEL 478



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 130/262 (49%), Gaps = 4/262 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGMLV 121
           +V    G      G+++H  ++K G +  T  +N LI++Y +F    +  A  LF+ +  
Sbjct: 257 IVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKP 316

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           +  ++W S++ G+  +G  E  +     +  S  + +++  S +L +CS L     G+Q 
Sbjct: 317 KDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQT 376

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGE 240
           HA A KS FE+N FV +SLI MY   G    A   F  ++ K +    N MIL Y + G 
Sbjct: 377 HALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGS 436

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGN 299
            +++  +F  + + + + +  TFT +++ C     ++EG + L+ +   + +   +    
Sbjct: 437 GQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYA 496

Query: 300 AIVTMYGKHGMSEEAERMFDAI 321
           A V + G+ G+  + + + +++
Sbjct: 497 AAVDLLGRAGLVNKVKELIESM 518


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 183/580 (31%), Positives = 307/580 (52%), Gaps = 6/580 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           + IHA  ++ G + + ++   ++   F+ G    +  +       ++   N MI      
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              + +  ++  +      P+ +TF  V+  C   L  E G ++H L VK G   +  V 
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            +++ +Y K G  + A ++FD I ++N  SWTA ISGYV  G   +AI+ F   L++G+ 
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            DS  L  V+  C    +L  G  +  +  ++G + +V + TALVD Y K G+++ AR +
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            DG   K    +++++ G+       E   + LF +    G++PD      +L   A   
Sbjct: 267 FDGMLEKNIVSWSSMIQGYASNGLPKE--ALDLFFKMLNEGLKPDCYAMVGVLCSCARLG 324

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L  G           +  + ++G ALI MYAKCG +D A+++F+G+  +D V WNA +S
Sbjct: 325 ALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAIS 384

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
             A+ G  K AL LF +M++ G  PD  + +G+L AC ++GL E G   FN +E ++ L 
Sbjct: 385 GLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLT 444

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P +EH+ CMVDLLGRAG L EA  LI S P   + ++W  L+   +L  +++   +  K+
Sbjct: 445 PEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKK 504

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L+ LEP  +G+++L+SN+YA     +EAAK+R+ M++  + K  G SWIE+D  +H F+ 
Sbjct: 505 LIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLV 564

Query: 719 SGKDHPESEEIYSKLDLLNDEMK----LKVKDSSAFELQD 754
               HP SE+IY+KL  L  ++K    +   D   F++++
Sbjct: 565 GDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEE 604



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 222/472 (47%), Gaps = 4/472 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK  + +HA LL+ G   DT+  N ++     F   + + ++ D     +   + ++I+G
Sbjct: 23  LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            + +  ++  + I   M +     +  T   +L+AC+ + D   G ++H+  +K+G E +
Sbjct: 83  LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            FV  SLI++Y   G    A  VF  +  K+       I  Y   G+   A  +F  LL 
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE 202

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+ ++   V+S C     +  G+ +     + G+VR + V  A+V  YGK G  E 
Sbjct: 203 MGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMER 262

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A  +FD + E+N++SW+++I GY  +G   +A++ F + L+ G+  D   +  V+  C+ 
Sbjct: 263 ARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCAR 322

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              LELG         + +L +  LGTAL+D+YAK G +  A  +  G   K    +NA 
Sbjct: 323 LGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAA 382

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIK 492
           +SG    ++   +D + LF Q   +G++PD  TF  LL        +  GR   ++    
Sbjct: 383 ISGL--AMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECV 440

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
                ++     ++ +  + G +D A Q+ K +  + + + W A+L    LH
Sbjct: 441 FTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 18/410 (4%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      D +LG  +H+ ++K+G + D F   +LINLY K   +D A K+FD + 
Sbjct: 111 FPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIP 170

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKFNEHTCSV--ILEACSLLEDRI 176
            ++  +WT+ I GY+  G        A DM+R   E      + S+  +L AC    D  
Sbjct: 171 DKNFASWTATISGYVGVGKCRE----AIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLR 226

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            GE I  +  ++G   NVFV T+L+  Y   G    A +VF G+  K++   + MI  Y 
Sbjct: 227 SGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYA 286

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             G  + A  +F  +L+   +P+ Y    V+  C     +E G     L      +    
Sbjct: 287 SNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSV 346

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           +G A++ MY K G  + A  +F  + +++ + W A ISG   SGH   A+  F +    G
Sbjct: 347 LGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSG 406

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           I  D +    ++  C+    +E G +  +          ++     +VD+  + G L  A
Sbjct: 407 IKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEA 466

Query: 416 RMLLDGFSCKYTAEFNAILSGFME---KIADDEEDVMVLFSQQRLAGMEP 462
             L+         E NAI+ G +    ++  D + V V+   ++L  +EP
Sbjct: 467 HQLIKSMP----MEANAIVWGALLGGCRLHRDTQLVEVVL--KKLIALEP 510



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 54/108 (50%)

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           +CL   + +HA  ++ G   D  + N ++      G+ + +F+I     + +I  +N M+
Sbjct: 21  SCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMI 80

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
               L+   + ++ ++  M++EG +PD  +   VL+AC     SE G+
Sbjct: 81  RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGV 128


>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
          Length = 674

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 198/657 (30%), Positives = 345/657 (52%), Gaps = 26/657 (3%)

Query: 97  NNLINLYA-----KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           N+L+NLYA     +  R+DV ++LFD M  R+ ++W +L   Y+  G  +  L +   M 
Sbjct: 16  NSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRML 75

Query: 152 RSEEKFNEHTCSVI-LEACSLLEDRIFGEQIHAFAIKSGFE--NNVFVGTSLISMYFHSG 208
             E+ F     S + +   ++ +D  +  Q++   +K G E  N++FV +S I M+   G
Sbjct: 76  --EDGFRPTPVSFVNIFPAAVADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFG 133

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY-TFTNVI 267
             + A  VF   A K+    N MI  Y + G+   A  +F  +L S   P D  TF + +
Sbjct: 134 DVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSAL 193

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISV--GNAIVTMYGKHGMSEEAERMFDAISERN 325
           +   ++  V  G+QLHG  +K G+ R + V  GNA+V MY + G  + A  +FD + E++
Sbjct: 194 TAASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKD 252

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
           +++W  +++ ++++    + +    E    G   DS  L  V+   S   +L++G Q HG
Sbjct: 253 IVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHG 312

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE--FNAILSGFMEKIAD 443
           + I+HG +    L + L+D+YAK G ++ A+ + D F      E  +NA+++G+ +  + 
Sbjct: 313 YLIRHG-IEGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQ--SG 369

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
             E  +++F     AG+EP  VT + +L +       +  G+ +H ++++     +V VG
Sbjct: 370 QPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVG 429

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
            ALI MY+KCG I  A  +F G++ +  V++  M+S    HG GK AL LF  M+ +G  
Sbjct: 430 TALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLK 489

Query: 563 PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMN 622
           PD ++ L  + AC YSGL + G+ L+  ++  +G+    +H  C+ DLL +AGR+ EA  
Sbjct: 490 PDAVTFLSAISACNYSGLVDEGLALYRSMDS-FGISATPQHHCCVADLLAKAGRVEEAYE 548

Query: 623 LINS-SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK--DAGSFILVSNMYAG 679
            I           +W +L++  K     + + L +K+LLD+E +   AG  +L+S + A 
Sbjct: 549 FIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAA 608

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL--HHFVASGKDHPESEEIYSKLD 734
           +   + A  +R  M    L KEAG SWI++ +    H F+   +++ E+E ++S LD
Sbjct: 609 ESNWNSADSLRKEMRARGLKKEAGSSWIKVQNAALEHKFIEKDQNYVENEHMFSILD 665



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 246/495 (49%), Gaps = 30/495 (6%)

Query: 80  VHAFLLKSGSQ--NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           ++  L+K G +  ND F  ++ I+++++F  +  A+++FD    ++   W ++I GY+ +
Sbjct: 104 LYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQN 163

Query: 138 GDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN-NVF 195
           G +   + +   +  S E   +  T    L A S  +D   G+Q+H + IK       V 
Sbjct: 164 GQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVI 223

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +G +L+ MY   G  + A ++F  L  KD+   N M+  + +         +   +  S 
Sbjct: 224 LGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSG 283

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           F  +  T T V+S       ++ GKQ HG  ++ G+  E  + + ++ MY K G  E A+
Sbjct: 284 FAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQ 342

Query: 316 RMFDAI--SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS- 372
           R+FD+   ++R+ ++W A+I+GY +SG   KAI  F   L+ G+   S  LA+V+  C  
Sbjct: 343 RVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDP 402

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
           V   +  G Q+H FA++    ++V +GTAL+D+Y+K G++ +A  +  G + K T  +  
Sbjct: 403 VGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTT 462

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG--------- 483
           ++SG  +      +  + LF+  +  G++PD VTF     LSA  AC   G         
Sbjct: 463 MISGLGQH--GFGKKALALFNSMQEKGLKPDAVTF-----LSAISACNYSGLVDEGLALY 515

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD--IVSWNAMLSAYA 541
           RS+ ++ I         V + L    AK G ++ A++  +G+ +    +  W ++L++  
Sbjct: 516 RSMDSFGISATPQHHCCVADLL----AKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCK 571

Query: 542 LHGLGKGALLLFEEM 556
             G  + A L+ +++
Sbjct: 572 AQGKQELAKLVTKKL 586



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 174/357 (48%), Gaps = 7/357 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQN-DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           S D+ LGQ +H +L+K   +       N L+ +Y++   +  A  LFD +  +  +TW +
Sbjct: 199 SQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNT 258

Query: 130 LIKGYL-DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++  ++ +D D E +L +  +M +S    +  T + +L A S   D   G+Q H + I+ 
Sbjct: 259 MVTAFIQNDFDLEGLL-LVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRH 317

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFH 246
           G E    + + LI MY  SG    A+ VF     A +D    N MI  Y ++G+ E A  
Sbjct: 318 GIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAIL 376

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           VF  +L +  EP   T  +V+  C     GV  GKQ+H  AV+  +   + VG A++ MY
Sbjct: 377 VFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMY 436

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G    AE +F  ++ ++ +++T +ISG  + G G KA+  F    + G+  D+    
Sbjct: 437 SKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFL 496

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           + I  C+    ++ GL L+      G  +  +    + D+ AK G ++ A   ++G 
Sbjct: 497 SAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGL 553



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 6/272 (2%)

Query: 68  SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM--LVRSAI 125
           S  +GDL++G+  H +L++ G + +  E+  LI++YAK  R+++AQ++FD      R  +
Sbjct: 298 SSNTGDLQIGKQAHGYLIRHGIEGEGLES-YLIDMYAKSGRVEMAQRVFDSFKNAKRDEV 356

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF-GEQIHAF 184
           TW ++I GY   G  E  + +   M  +  +    T + +L AC  +   ++ G+QIH F
Sbjct: 357 TWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCF 416

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           A++   + NVFVGT+LI MY   G    AENVF G+  K       MI    + G  + A
Sbjct: 417 AVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKA 476

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             +F  +     +P+  TF + IS C  +  V+EG  L+     FG+         +  +
Sbjct: 477 LALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADL 536

Query: 305 YGKHGMSEEAERMFDAISER-NLIS-WTALIS 334
             K G  EEA    + + E  N ++ W +L++
Sbjct: 537 LAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLA 568


>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 655

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 207/656 (31%), Positives = 336/656 (51%), Gaps = 12/656 (1%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLK-SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           +L++  I S +L LGQ +H  LLK S + + +    NL  LYA  N +++A+ +FD +  
Sbjct: 4   RLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63

Query: 122 R--SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
              + I W  +I+ Y+ +G  E  L +   M  S  +  + T   +L+AC+ L     G+
Sbjct: 64  PRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGK 123

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            IH+    S F  +++V T+L+  Y   G    A  VF  +  +D+   N MI  ++   
Sbjct: 124 LIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHC 183

Query: 240 ESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
                  +F+ +  SD   PN  T   +         + EGK +HG   + G   ++ V 
Sbjct: 184 CLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL---DL 355
             I+ +Y K      A R+FD+  ++N ++W+A+I GYV +    +A   FL+ L   D+
Sbjct: 244 TGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADM 303

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            +    + +  ++ GC+   +L  G  +H +AIK G++ D+ +G  ++  YAK G L  A
Sbjct: 304 AMVTPVA-IGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDA 362

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
                    K    +N+++SG +E    +E     LF Q + +G+ PD  T   +L+  +
Sbjct: 363 FRQFTEIGLKDIVSYNSLISGCVENCRAEES--FRLFHQMKSSGIRPDITTLLGILTACS 420

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           + A L  G S H Y +  GYA +  + NAL+ MY KCG +  A ++F  +  RDIVSWN 
Sbjct: 421 NLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNT 480

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ-I 594
           ML  + +HGLGK AL LF  M+  G  PD++++L +L AC +SGL + G  LFN + +  
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           + + P L+H+ CM DLL RAG L EA + +N  PF     +  TL+S      N +    
Sbjct: 541 FNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNE 600

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            SK++  L  +   S +L+SN Y+     ++AAK+R T     L K  G SW+++D
Sbjct: 601 VSKKMQSL-GETTESLVLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVDVD 655



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 227/487 (46%), Gaps = 12/487 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K   G   ++ G+ +H+ +  S    D +    L++ YAK   LD+A K+FD M 
Sbjct: 106 YPFVLKACAGLRAIEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMP 165

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGE 179
            R  + W ++I G+        V+G+  DM RS+    N  T   +  A         G+
Sbjct: 166 KRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGK 225

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            +H +  + GF N++ V T ++ +Y  S C   A  VF     K+    + MI  Y +  
Sbjct: 226 AVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENE 285

Query: 240 ESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISV 297
             + A  VF+ +L ++D          +I +     G +  G+ +H  A+K G + +++V
Sbjct: 286 MIKEAGEVFLQMLVNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTV 345

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GN +++ Y K+G   +A R F  I  ++++S+ +LISG V +    ++   F +    GI
Sbjct: 346 GNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGI 405

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D + L  ++  CS  + L  G   HG+ + +GY  +  +  AL+D+Y K G L  A+ 
Sbjct: 406 RPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKR 465

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    +    +N +L GF   I    ++ + LF+  +  G+ PD VT   +LS  +  
Sbjct: 466 VFDTMHKRDIVSWNTMLFGF--GIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHS 523

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVG----NALITMYAKCGSIDGAFQIFKGIS-DRDIVS 532
             +  G+ L     +  +  +VI      N +  + A+ G +D A+     +  + DI  
Sbjct: 524 GLVDEGKQLFNSMSRGDF--NVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRV 581

Query: 533 WNAMLSA 539
              +LSA
Sbjct: 582 LGTLLSA 588


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 187/651 (28%), Positives = 319/651 (49%), Gaps = 45/651 (6%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+  H   +K G   + F  N L+ +Y K   +  A +LF GM   + +++T+++ G   
Sbjct: 160 GRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQ 219

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEAC--------SLLEDRIFGEQIHAFAIKS 188
            G  +  L +   M RS    +  + S +L AC        S+      G+ IHA  ++ 
Sbjct: 220 TGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRK 279

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF ++  VG SLI MY       EA  VF  L    +   N +I  + + G    A  V 
Sbjct: 280 GFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVL 339

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +  + FEPN+ T++N+++ C +       + +H                         
Sbjct: 340 SLMQEAGFEPNEVTYSNLLASCIK------ARDVH------------------------- 368

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
                A  MFD IS  ++ +W  L+SGY +       I  F       +  D + LA ++
Sbjct: 369 ----SARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVIL 424

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS    L+ G Q+H  +++    +D+ + + LVD+Y+K G +  AR + +  + +   
Sbjct: 425 SSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVV 484

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N+I+SG    I    ++    F Q R  G+ P   +++ +++  +  + +  GR +HA
Sbjct: 485 CWNSIISGL--TIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHA 542

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
             +K GY  +V VG+ALI MYAKCG++D A   F  +  ++IV+WN M+  YA +GLG  
Sbjct: 543 QVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDK 602

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A+ LFE M      PD ++ + VL  C +SGL +  +  FN +E  YG+ P+ EH+ C++
Sbjct: 603 AVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLI 662

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           D LGRAGR  E   LI+  P  + P++W  L++   +  N++    A++ L  ++PK+  
Sbjct: 663 DALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPS 722

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
            ++L+SN+YA  G   +A+ VR  M++  + K  G SWI+    +  F+ +
Sbjct: 723 PYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVA 773



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 235/515 (45%), Gaps = 55/515 (10%)

Query: 75  KLGQAVHAFL-LKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           + G   HA L  ++    + +  N  ++   +   LD A+ L  GM  R+A++W ++I  
Sbjct: 55  RAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISA 114

Query: 134 YL-DDGDYESVLGIACDMY---RSEEKFNEH-TCSVILEACSLLEDRIFGEQIHAFAIKS 188
                GD     G A +MY   R+E     H T + +L AC  L     G + H  A+K 
Sbjct: 115 LARSPGDG----GEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKV 170

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G + N FV  +L+ MY   G   +A  +F G+A  +      M+    + G  + A  +F
Sbjct: 171 GLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLF 230

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEE--------GKQLHGLAVKFGVVREISVGNA 300
             +  S    +  + ++V+  C +    +         G+ +H L V+ G   +  VGN+
Sbjct: 231 ARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNS 290

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K    +EA ++F+++    ++SW  LI+G+ + G   KA+    E L L     
Sbjct: 291 LIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAV----EVLSL----- 341

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
                               +Q  GF       S+      L+    K  D+ SAR + D
Sbjct: 342 --------------------MQEAGFEPNEVTYSN------LLASCIKARDVHSARAMFD 375

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             S      +N +LSG+ ++  +  +D + LF + +   ++PD  T + +LS  +    L
Sbjct: 376 KISRPSVTTWNTLLSGYCQE--EQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGIL 433

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             GR +H+ S++     D+ V + L+ MY+KCG I  A  IF  +++RD+V WN+++S  
Sbjct: 434 DFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGL 493

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            +H L K A   F++M+  G  P + S   ++ +C
Sbjct: 494 TIHSLNKEAFDFFKQMRENGIMPTESSYASMINSC 528



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 223/474 (47%), Gaps = 43/474 (9%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            +LGQA+HA +++ G  +D    N+LI++Y K   +D A K+F+ +   + ++W  LI G
Sbjct: 266 FRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITG 325

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +  +G                      +C+  +E  SL+++             +GFE N
Sbjct: 326 FGQEG----------------------SCAKAVEVLSLMQE-------------AGFEPN 350

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
               ++L++    +     A  +F  ++   V   N ++  Y +  + +    +F  +  
Sbjct: 351 EVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQH 410

Query: 254 SDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            + +P+  T   ++S C   LG+ + G+Q+H  +V+F +  ++ V + +V MY K G   
Sbjct: 411 QNVQPDRTTLAVILSSC-SKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIG 469

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +F+ ++ER+++ W ++ISG        +A + F +  + GI    S  A++I+ CS
Sbjct: 470 IARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCS 529

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             S++  G Q+H   +K GY  +V +G+AL+D+YAK G++  AR+  D    K    +N 
Sbjct: 530 RLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNE 589

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++ G+ +    D+   + LF        +PD VTF  +L+   S + LV        S++
Sbjct: 590 MIHGYAQNGLGDK--AVELFEYMLTTEQKPDAVTFIAVLT-GCSHSGLVDKAMAFFNSME 646

Query: 493 TGYAADVIVGN--ALITMYAKCGS-IDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             Y    +  +   LI    + G  ++    I K     D + W  +L+A  +H
Sbjct: 647 NSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVH 700



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 174/386 (45%), Gaps = 9/386 (2%)

Query: 49  VSCSERTLLFNDWPQLVKIS---IGSGDLKLGQAVHAFLLKSGSQNDTFEAN-----NLI 100
           V   E   +F   P +  +S   + +G  + G    A  + S  Q   FE N     NL+
Sbjct: 299 VEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLL 358

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
               K   +  A+ +FD +   S  TW +L+ GY  +  ++  + +   M     + +  
Sbjct: 359 ASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRT 418

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T +VIL +CS L    FG Q+H+ +++    N++FV + L+ MY   G    A ++F  +
Sbjct: 419 TLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKM 478

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             +DV C N +I        ++ AF  F  +  +   P + ++ ++I+ C     +  G+
Sbjct: 479 TERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGR 538

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           Q+H   +K G  + + VG+A++ MY K G  ++A   FD +  +N+++W  +I GY ++G
Sbjct: 539 QIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNG 598

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLG 399
            G KA+  F   L      D+     V+ GCS    ++  +   +     +G +      
Sbjct: 599 LGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHY 658

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCK 425
           T L+D   + G       L+    CK
Sbjct: 659 TCLIDALGRAGRFVEVEALIHKMPCK 684



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 104/463 (22%), Positives = 201/463 (43%), Gaps = 58/463 (12%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA-GESEMAFHVFVHL 251
           N +   + +S    +G    A ++  G+  ++    N +I    ++ G+   A  ++  +
Sbjct: 73  NDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRM 132

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            +    P  +T  +V+S C     + +G++ HG+AVK G+     V NA++ MY K G  
Sbjct: 133 RAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSV 192

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            +A R+F  ++  N +S+TA++ G  ++G    A+  F      G+  D   +++V+  C
Sbjct: 193 GDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGAC 252

Query: 372 --------SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
                   SV     LG  +H   ++ G+ SD  +G +L+D+Y K  ++  A  + +   
Sbjct: 253 AQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLP 312

Query: 424 CKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                 +N +++GF  E       +V+ L  +   AG EP+ VT+S LL      A  ++
Sbjct: 313 SVTIVSWNILITGFGQEGSCAKAVEVLSLMQE---AGFEPNEVTYSNLL------ASCIK 363

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
            R +H+                             A  +F  IS   + +WN +LS Y  
Sbjct: 364 ARDVHS-----------------------------ARAMFDKISRPSVTTWNTLLSGYCQ 394

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
               +  + LF  M+ +   PD  ++  +L +C     S+ GI  F        +R +L 
Sbjct: 395 EEQHQDTIELFRRMQHQNVQPDRTTLAVILSSC-----SKLGILDFGRQVHSASVRFLLH 449

Query: 603 H----FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +     + +VD+  + G++  A ++ N        + W +++S
Sbjct: 450 NDMFVASGLVDMYSKCGQIGIARSIFNKMT-ERDVVCWNSIIS 491



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 145/327 (44%), Gaps = 21/327 (6%)

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           + GDL +AR LL G   +    +N ++S       D  E V  ++ + R  G+ P   T 
Sbjct: 86  RAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVE-MYGRMRAEGLLPTHFTL 144

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           + +LS     A L  GR  H  ++K G  A+  V NAL+ MY KCGS+  A ++F G++ 
Sbjct: 145 ASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMAR 204

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
            + VS+ AM+   A  G    AL LF  M R G   D +S+  VL AC  +  ++  +  
Sbjct: 205 PNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVAR 264

Query: 588 FNEIEQIYGLRPILEHFA-------CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
              + Q      + + F         ++D+  +   + EA+ +  S P S + + W  L+
Sbjct: 265 AFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLP-SVTIVSWNILI 323

Query: 641 S--VSKLMANSKFSILASKRLLDLEPKDA------GSFILVSNMYAGQGMLDEAAKVRTT 692
           +    +        +L+  +    EP +        S I   ++++ + M D+ ++   T
Sbjct: 324 TGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVT 383

Query: 693 MNDLRLS----KEAGCSWIEIDSKLHH 715
             +  LS    +E     IE+  ++ H
Sbjct: 384 TWNTLLSGYCQEEQHQDTIELFRRMQH 410


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 188/637 (29%), Positives = 316/637 (49%), Gaps = 88/637 (13%)

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           ++  L  A+ LFD M  R  ++W +++ GY  +G  +           ++E F+E  C  
Sbjct: 42  RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKE----------AKEIFDEMPCK- 90

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
                                       N      +++ Y  +G   +A  +F   A  +
Sbjct: 91  ----------------------------NSISWNGMLAAYVQNGRIEDARRLFESKADWE 122

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +   N M+  Y K      A  +F  +   D    + ++  +IS   +N  + E ++L  
Sbjct: 123 LISWNCMMGGYVKRNRLVDARGIFDRMPERD----EVSWNTMISGYAQNGELLEAQRL-- 176

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
              +   VR++    A+V+ Y ++GM +EA R+FD + E+N +SW A+I+GYV+     K
Sbjct: 177 --FEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQC----K 230

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
            ++   E  +   C + S   T+I G                                  
Sbjct: 231 RMDQARELFEAMPCQNVSSWNTMITG---------------------------------- 256

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
            YA+ GD+  AR   D    + +  + AI++G+ +  +   E+ + LF + +  G   + 
Sbjct: 257 -YAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQ--SGYGEEALHLFVEMKRDGERLNR 313

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
            TF+  LS  A  A L  G+ +H   +K G  +   VGNAL+ MY KCG+ID A+ +F+G
Sbjct: 314 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 373

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           I ++++VSWN M++ YA HG GK AL+LFE MK+ G  PDD++++GVL AC ++GL + G
Sbjct: 374 IEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKG 433

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
              F  + Q YG+    +H+ CM+DLLGRAGRL +A NL+ + PF      W  L+  S+
Sbjct: 434 TEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASR 493

Query: 645 LMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
           +  N++    A+K + ++EP ++G ++L+SN+YA  G   +  ++R  M D  + K  G 
Sbjct: 494 IHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGY 553

Query: 705 SWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           SW+E+ +K+H F      HPE + IY+ L+ L+ +MK
Sbjct: 554 SWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMK 590



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 165/370 (44%), Gaps = 44/370 (11%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           L +S +  +    N ++  Y K NRL  A+ +FD M  R  ++W ++I GY  +G     
Sbjct: 114 LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNG----- 168

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSL----LEDRIFGEQIHAF------------AIK 187
                ++  ++  F E     +    ++    +++ +  E    F            AI 
Sbjct: 169 -----ELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAII 223

Query: 188 SGFE-----------------NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
           +G+                   NV    ++I+ Y  +G   +A N F  +  +D      
Sbjct: 224 AGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAA 283

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
           +I  Y ++G  E A H+FV +       N  TFT+ +S C E   +E GKQ+HG  VK G
Sbjct: 284 IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAG 343

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
           +     VGNA++ MY K G  ++A  +F+ I E+ ++SW  +I+GY R G G +A+  F 
Sbjct: 344 LESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFE 403

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKG 409
                GI  D   +  V+  CS    ++ G +  +     +G  ++ +  T ++D+  + 
Sbjct: 404 SMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRA 463

Query: 410 GDLKSARMLL 419
           G L  A+ L+
Sbjct: 464 GRLDDAQNLM 473



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 2/239 (0%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N +I  YA+   +  A+  FD M  R +I+W ++I GY   G  E  L +  +M R  E+
Sbjct: 251 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 310

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            N  T +  L  C+ +     G+Q+H   +K+G E+  +VG +L+ MY   G   +A  V
Sbjct: 311 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F G+  K+V   N MI  Y + G  + A  +F  +  +   P+D T   V+S C     V
Sbjct: 371 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 430

Query: 277 EEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
           ++G +  + +   +G+         ++ + G+ G  ++A+ +   +  E +  +W AL+
Sbjct: 431 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 76/152 (50%), Gaps = 3/152 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG+ VH  ++K+G ++  +  N L+ +Y K   +D A  +F+G+  +  ++W ++I G
Sbjct: 329 LELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAG 388

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL--LEDRIFGEQIHAFAIKSGFE 191
           Y   G  +  L +   M ++    ++ T   +L ACS   L D+   E  ++     G  
Sbjct: 389 YARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK-GTEYFYSMTQDYGIT 447

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
            N    T +I +   +G   +A+N+ + + ++
Sbjct: 448 ANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFE 479


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 198/692 (28%), Positives = 340/692 (49%), Gaps = 20/692 (2%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           + W  L ++   S  L+ G+ +H  +++SG  +  F +N+L+++YA+      A+ L D 
Sbjct: 13  DSWRDLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDR 72

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           M  R+A++W ++I+     GD+   L     M +     +      +++A   +++   G
Sbjct: 73  MPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE---G 129

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           E +  FA KSGF+ +  VGT+LI MY   G    A++ F  +  + V   N +I  Y++ 
Sbjct: 130 EIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRG 189

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE-----GKQLHGLAVKFGVVR 293
            E E +  VF  +L     PN  T   +I +     G+       G  +H  ++  G++ 
Sbjct: 190 DEKEQSLRVFREMLLQGIAPNAVT---IICIASAVAGIAAKITTCGNLIHSCSIDSGLIS 246

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             +V N+I+ ++G+ G    A  +F+ +  R++ SW  +IS + ++GH   A++ +    
Sbjct: 247 VTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGR-- 304

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
            + I  D      V++ C    +LE G  +H     HGY SD+ + TALV +Y + G L 
Sbjct: 305 -MTIRPDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLD 363

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            A  +            NAI++   +    D    ++ F Q    G+ P   T   +L  
Sbjct: 364 RAAEVFAAIQHPGVITLNAIIAAHAQFGRADGS--LLHFRQMLQLGIRPSKFTLVAVLGA 421

Query: 474 SASQACLVRG-RSLHAYSIKTG---YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
            A+        R LH +  +        D++V NAL+ MYAKCG +D A  IF      +
Sbjct: 422 CATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGN 481

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           + +WNA+++ YA HG    A+ L  EM+  G +PD IS    L A  ++   E G  +F 
Sbjct: 482 VSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFY 541

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            I + YGL P +EH+  +VDLLGRAG L EA   + S   +     W  L+   ++  + 
Sbjct: 542 AISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQ 601

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
             ++ A++ ++ ++P    S+ ++SN+Y+  G  DEA ++R  M++    KE G SWIE+
Sbjct: 602 DRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEV 661

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            +++H F    + HP + EIY +LD L   +K
Sbjct: 662 KNRVHEFAVKDRSHPRTGEIYERLDELRVVLK 693


>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 607

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 183/593 (30%), Positives = 314/593 (52%), Gaps = 5/593 (0%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +E T   +L +CS   +  FG  IH + +K GF+    V T+L  MY     F  A  +F
Sbjct: 9   DEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLF 68

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
              + KD+   + +  E  +    E  F VF  +++    P+ +TF N++        ++
Sbjct: 69  DKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQ 128

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
             K +H +A+   +  ++ V  A++++Y K     +A ++FD + E++ + W  +I+ Y 
Sbjct: 129 LAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYA 188

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           R G   + +  F      GI  D      VI   +    ++ G Q H   +++G  S V 
Sbjct: 189 REGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVS 248

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +  +L+D+Y +   L SA  + +  + K    ++A++ G+++         + LFS+ + 
Sbjct: 249 VHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKN--GQSLTALSLFSKMKS 306

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
            G++ D V    +L        L   + LH YS+K G  +   +  AL+  YAKCGSI+ 
Sbjct: 307 DGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEM 366

Query: 518 AFQIFK--GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           A ++F+   I D+D++ WN+M+SA+A HG       L+  MK     PD ++ LG+L AC
Sbjct: 367 AQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTAC 426

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
           + SGL E G   F E+ + YG +P  EH+ACMV+LLGRAG +SEA  L+ + P      +
Sbjct: 427 VNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARV 486

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W  L+S  K+   SK +  A+++L+++EP++AG++IL+SN+YA  G  D  AK+R+ + +
Sbjct: 487 WGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRN 546

Query: 696 LRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSS 748
             L K  GCSW+EI+  +  F  + + HP + +IY+ L  L  E+K +V++ S
Sbjct: 547 KGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIK-EVREKS 598



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 225/500 (45%), Gaps = 6/500 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++      ++  G+ +H +L+K G       A  L  +Y +    + A +LFD   
Sbjct: 13  YPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRS 72

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           V+     +SL      + + E +  +   M   +   +  T   +L   + L      + 
Sbjct: 73  VKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKI 132

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H  AI S    ++ V T+++S+Y       +A  +F  +  KD    N MI  Y + G+
Sbjct: 133 VHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGK 192

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
                 +F  +  S    + +T   VIS   +   V+ GKQ H   ++ G   ++SV N+
Sbjct: 193 PTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNS 252

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY +  + + A ++F+ ++++++ISW+A+I GYV++G    A++ F +    GI  D
Sbjct: 253 LIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQAD 312

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL- 419
              +  ++        LE    LHG+++K G  S   L TAL+  YAK G ++ A+ L  
Sbjct: 313 FVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFE 372

Query: 420 -DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +    K    +N+++S        D      L+++ + +  +PD VTF  LL+   +  
Sbjct: 373 EEKIDDKDLIMWNSMISAHANH--GDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSG 430

Query: 479 CLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAM 536
            + +G+       ++ G          ++ +  + G I  A ++ K +  + D   W  +
Sbjct: 431 LVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPL 490

Query: 537 LSAYALHGLGKGALLLFEEM 556
           LSA  +H   K A    E++
Sbjct: 491 LSACKMHPGSKLAEFAAEKL 510



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 180/392 (45%), Gaps = 4/392 (1%)

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +++    P++ T+  V+  C     V  G+ +HG  VK G      V  A+  MY +   
Sbjct: 1   MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A ++FD  S ++L   ++L +   ++ +G      F   +   +  DS     ++  
Sbjct: 61  FENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRF 120

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            +  ++++L   +H  AI      D+ + TA++ +Y+K   L  AR L D    K    +
Sbjct: 121 IAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVW 180

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N +++ +  +    E   + LF     +G+  D  T   ++S  A   C+  G+  HA+ 
Sbjct: 181 NIMIAAYAREGKPTE--CLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHI 238

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           ++ G  + V V N+LI MY +C  +D A +IF  ++D+ ++SW+AM+  Y  +G    AL
Sbjct: 239 LRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTAL 298

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            LF +MK +G   D + ++ +L A ++ G  E  +   +      GL  +      ++  
Sbjct: 299 SLFSKMKSDGIQADFVIMINILPAFVHIGALE-NVKYLHGYSMKLGLTSLPSLNTALLIT 357

Query: 611 LGRAGRLSEAMNLINSSPFSESPL-LWRTLVS 641
             + G +  A  L       +  L +W +++S
Sbjct: 358 YAKCGSIEMAQRLFEEEKIDDKDLIMWNSMIS 389


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 201/651 (30%), Positives = 325/651 (49%), Gaps = 14/651 (2%)

Query: 91  NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM 150
            D + A++L+ +Y +   L+ A  +F  +  +S + WT LI  Y+  G   + + +   +
Sbjct: 60  RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
            +     +      +L ACS  E    G  IH  A+++G      V ++L+SMY   G  
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179

Query: 211 REAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
           R+A  +F  L  + DV   N MI   ++ G    A  +F  +L     P+  TF +V   
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 270 CYEN--LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
           C  +  L   + K  H    + G+  ++ V  A+V  Y + G  + A + F  + ERN +
Sbjct: 240 CSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAV 299

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           SWT++I+ + + GH   A+  F   L  G+    S L   ++GC    +L +   +   A
Sbjct: 300 SWTSMIAAFTQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCE---DLRVARLVEAIA 355

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI---ADD 444
            + G ++DV + T LV  YA+    + A   +  FS +   E++A L   M  +     D
Sbjct: 356 QEIGVVTDVAIVTDLVMAYARCDGQEDA---IRVFSAREEGEWDAALVTAMIAVYAQCRD 412

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA-YSIKTGYAADVIVGN 503
                 L+      G+ PD + +   L   AS A L  GR +HA  +       DV +GN
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           A+++MY +CGS+  A   F G+  RD +SWNAMLSA A HG  +    LF  M +EGF  
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDA 532

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           + I+ L +L AC ++GL + G   F+ +   +G+ P  EH+ CMVDLLGR GRL++A  +
Sbjct: 533 ERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGI 592

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
           + + P       W  L+   ++  +++    A++R+L+L      +++ + N+Y+  G  
Sbjct: 593 VQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRW 652

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           D+AA VR  M DL L K  G S IEI SK+H FV   + HP+SE IY++L+
Sbjct: 653 DDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELE 703



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 17/275 (6%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW-- 127
           G  DL++ + V A   + G   D     +L+  YA+ +  + A ++F     R    W  
Sbjct: 341 GCEDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSA---REEGEWDA 397

Query: 128 ---TSLIKGYLDDGDYESVL---GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              T++I  Y    D  S     G A +   S ++    T    L+AC+ L     G QI
Sbjct: 398 ALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITA---LDACASLAALSEGRQI 454

Query: 182 HA-FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           HA  A     + +V +G +++SMY   G  R+A + F G+  +D    N M+    + G 
Sbjct: 455 HACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGR 514

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGN 299
            E    +F  +L   F+     F N++S C     V+ G +    +    GVV       
Sbjct: 515 VEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYG 574

Query: 300 AIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            +V + G+ G   +A  +  A+    +  +W AL+
Sbjct: 575 CMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALM 609


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 201/661 (30%), Positives = 327/661 (49%), Gaps = 17/661 (2%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLK----SGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           P     S   G L +G AVHA+ ++     G  +    A++L+ +YA+   +  A K+F+
Sbjct: 115 PLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFE 174

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLE 173
            M  R  + WT++I G + +G+    L    +M R       + N  T    LEAC +L+
Sbjct: 175 EMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLD 234

Query: 174 DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
           +   G  +H + +K G  ++  V ++L SMY       +A  +F  L  KDV     +I 
Sbjct: 235 ELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIG 294

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
            Y + G    A  +F  ++ S  +P++   + V+S    N  V  GK  H +  K     
Sbjct: 295 IYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGD 354

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
            + +GNA+++MYGK  M + A R+F  + +R+  SW  ++ GY ++G   K +  + E  
Sbjct: 355 SVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQ 414

Query: 354 ---DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
                   C +  L + I  CS  + L LG   H ++IKH    D  +   L+ +Y + G
Sbjct: 415 LRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCG 474

Query: 411 DLKSARMLLDGFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
               A  +      K     +N ++S +           M L+ Q  + G+ P+  T   
Sbjct: 475 KFDHACKIFGLAKLKGDVVTWNTLISSYAH--LGHSNAAMSLYDQMLIEGLTPNSTTLIT 532

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           ++S  A+   L RG  +H+Y  + G+  DV +  ALI MYAKCG +  A +IF  +   D
Sbjct: 533 VISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHD 592

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
           +V+WN M+S Y +HG  K AL LF +M+     P+ ++ L +L A  +SGL E G  +F 
Sbjct: 593 VVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFT 652

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            + + Y L P L+H+ACMVDLLG++G L EA +++ + P      +W TL+S  KL  N 
Sbjct: 653 RMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNF 711

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +  +  +K+    +P++ G +IL+SN Y G    DE  K+R TM +L + K  G  W  +
Sbjct: 712 EMGLRIAKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRETMKNLGVQK--GVGWSAV 769

Query: 710 D 710
           D
Sbjct: 770 D 770



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 246/534 (46%), Gaps = 25/534 (4%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           ++HA A+ SG      +   L+S Y  +G    A   F      D    N +I  ++ A 
Sbjct: 31  RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV----REI 295
           +   A      +L+S   P+ +T     S   E   +  G  +H   V++G++      +
Sbjct: 91  DFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSV 150

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           +V +++V MY + G   +A ++F+ + ER++++WTA+ISG VR+G  G+ +   +E + L
Sbjct: 151 AVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRL 210

Query: 356 G----ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
                +  +S  + + ++ C V   L  G  LHG+ +K G      + +AL  +Y+K   
Sbjct: 211 AGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYS 270

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
            + A  L      K    + +++  +  +    E   M LF Q   +G++PD +  S +L
Sbjct: 271 TEDACALFLELPEKDVVSWTSLIGIYCRRGLITE--AMELFQQMMESGLQPDEILVSCVL 328

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           S   +   +  G++ HA   K  +   V++GNALI+MY K   +D A ++F+ +  RD  
Sbjct: 329 SGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDAD 388

Query: 532 SWNAMLSAYALHGLGKGALLLFEEM----KREGFAPDDISILGVLQACIYSGLSEGGICL 587
           SWN M+  Y   G     L L+ EM    K E +   D S++  + +C  S L+E     
Sbjct: 389 SWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVAD-SLVSAISSC--SRLAE---LR 442

Query: 588 FNEIEQIYGLRPILEHFACMVDLL----GRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
                  Y ++ +L+  + + ++L    GR G+   A  +   +      + W TL+S  
Sbjct: 443 LGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSY 502

Query: 644 KLMANSKFSI-LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             + +S  ++ L  + L++    ++ + I V +  A    L+   K+ + + ++
Sbjct: 503 AHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEM 556


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 183/570 (32%), Positives = 309/570 (54%), Gaps = 7/570 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +QIHA  I SG  +N F+  SL++ Y + G   +A+ +F     K+V     +I    K 
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISV 297
                A  VF  +   +F+PN  T ++V+   + NLG +   K +H   V+ G    + V
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPA-FANLGLIRIAKSVHCFWVRGGFEGNVFV 159

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             A+V MY K G    A ++F+++SERN++SW A++SGY   G   +AI+ F      G+
Sbjct: 160 ETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGL 219

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   + ++I        L++G  +HGF I+ GY +D  + TAL+DIY     +  A  
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +      K  A +  +L+GF      D   +        +  ++ D +    +LS  +  
Sbjct: 280 VFSEMFVKDVAAWTLMLTGFSSGRHWDRA-IKHFNKMLGIQNLKLDSIVLMGILSSCSHS 338

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L +GR +HA +IKT +A ++ VG+A+I MYA CG+++ A + F G+ ++D+V WNAM+
Sbjct: 339 GALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMI 398

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +   ++G G  A+ LF +MK  G  PD+ + + VL AC ++G+   G+ +F  + +    
Sbjct: 399 AGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHD 458

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P L+H+AC++D+LGRAG+L  A + IN+ PF     ++ TL+   ++  N K     S+
Sbjct: 459 IPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQ 518

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           ++ ++EP DAG ++L+SNMYA  G  +     R ++   RL K+ G S IEI+ +++ F+
Sbjct: 519 KIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFM 578

Query: 718 ASGKDHPESEEIYSKLDLLNDEMKLKVKDS 747
           A  KDHP+    Y K++ +   + LK+K +
Sbjct: 579 AGEKDHPQ----YFKIEGILKGLILKIKKA 604



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 235/475 (49%), Gaps = 5/475 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DLK  Q +HA ++ SG  ++TF +N+L+N Y     L  A+++F     ++ ++WT LI 
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILIS 95

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G   +  +   + +  +M     K N  T S +L A + L      + +H F ++ GFE 
Sbjct: 96  GLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVFV T+L+ MY   GC   A  +F  ++ ++V   N ++  Y+  G SE A  +F  + 
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                 + YT  ++I        ++ G  +HG  ++ G   +  +  A++ +Y  H   +
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGC 371
           +A R+F  +  +++ +WT +++G+    H  +AI  F + L +  +  DS  L  ++  C
Sbjct: 276 DAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSC 335

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S    L+ G ++H  AIK  + +++ +G+A++D+YA  G+L+ A+    G   K    +N
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWN 395

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+++G    +     D + LF Q + +G++PD  TF  +L   +    +  G  +  + +
Sbjct: 396 AMIAG--NGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453

Query: 492 KTGYAADVIVGNA-LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           KT +    +   A +I +  + G +D A+     +    D   ++ +L A  +HG
Sbjct: 454 KTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 212/437 (48%), Gaps = 11/437 (2%)

Query: 44  CSISSVSCSERTLLFNDWPQLVKIS------IGSGDLKLGQAVHAFLLKSGSQNDTFEAN 97
           C + ++       + N  P  V IS         G +++ ++VH F ++ G + + F   
Sbjct: 102 CFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 98  NLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF 157
            L+++Y+KF  + VA++LF+ M  R+ ++W +++ GY D G  E  + +   M R     
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           + +T   ++ A   +     G  IH F I++G+EN+  + T+L+ +Y    C  +A  VF
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVF 281

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGV 276
             +  KDV     M+  ++     + A   F  +L   + + +      ++S C  +  +
Sbjct: 282 SEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGAL 341

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
           ++G+++H LA+K      I VG+A++ MY   G  E+A+R F  + E++++ W A+I+G 
Sbjct: 342 QQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGN 401

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSD 395
             +G+G  AI+ FL+    G+  D S   +V+  CS    +  GLQ+    +K  + + +
Sbjct: 402 GMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPN 461

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           ++    ++DI  + G L +A   ++    +   +  + L G      + +    +    Q
Sbjct: 462 LQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEI---SQ 518

Query: 456 RLAGMEPDPVTFSRLLS 472
           ++  MEP+   +  LLS
Sbjct: 519 KIFEMEPNDAGYYVLLS 535


>gi|449522919|ref|XP_004168473.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 670

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 208/681 (30%), Positives = 340/681 (49%), Gaps = 56/681 (8%)

Query: 41  AYLCSISSVSCSERTLLFNDWPQLVKISIGS--GDL-----KLGQAVHAFLLKSGSQNDT 93
            ++C +S    S R L  N+   + +  IG+  GD      +L  +    ++ +    D 
Sbjct: 33  TWMCPLSF---STRQLTGNEVSMVEQKKIGNDLGDCSICLDELSPSNREIIITNPIYGDQ 89

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F    L+  Y+    L+ A+K+FD +     +   +++ GYL +  Y   + +   M R 
Sbjct: 90  FLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRC 149

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
             +F+ +TC+  L+AC  L D   G ++   A+  G     F+G+S+++  F  G FRE 
Sbjct: 150 HLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILN--FLEGLFREG 207

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
            N+F  + Y  +                               EP+  T  ++I  C E 
Sbjct: 208 YNLFLDMLYNKI-------------------------------EPSAVTMISLIQSCGEM 236

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             +  GK +HG  + FG+ R+  V   ++ MY K G  E A  +F+ +  RNL+SW  +I
Sbjct: 237 RNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMI 296

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
           SGYV++G   + +  F + +   +  DS  + ++I  CS  ++L+ G  LHGF  + G  
Sbjct: 297 SGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLD 356

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
            ++ L TA+VD+YAK G L  A  + +    K    + A+L G  +       D + LF 
Sbjct: 357 LNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQN--GHARDALKLFD 414

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQAC-----LVRGRSLHAYSIKTGYAADVIVGNALITM 508
           Q     M+ + VTF+ L  +S    C     L  GRS+HA   +  +A++V+V  ALI M
Sbjct: 415 Q-----MQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDM 469

Query: 509 YAKCGSIDGAFQIFK-GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           YAKC  I+ A  +FK G++ +D++ +N+M+S Y +HGLG  AL ++  M REG  P++ +
Sbjct: 470 YAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNEST 529

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
            + +L AC +SGL E GI LF  + + +   P  + +AC+VDLL RAGRL +A  LIN  
Sbjct: 530 FVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQM 589

Query: 628 PFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAA 687
           PF+ +  +  TL++   L  + +  +  + RLL LE ++   +I +SN+YA     D   
Sbjct: 590 PFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVK 649

Query: 688 KVRTTMNDLRLSKEAGCSWIE 708
            VR  M +  + K  G S IE
Sbjct: 650 YVRGLMMEQEIKKIPGYSSIE 670


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 169/493 (34%), Positives = 275/493 (55%), Gaps = 4/493 (0%)

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +L S   PN +TF   I  C        GKQLH    K G + E  V  ++++MYGK  +
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 311 SEEAERMFD--AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
            + A ++FD    S +  + + +L+SGY  +      +  F E  +LG+  +   +  ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C +  NL LG+ +HGF +K G   D  +G  L+ +Y K G++   R L D    K   
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +NA+++G+ +    +  +V+ L+ +    G  PDP+T   +LS  A    L  G+ +  
Sbjct: 181 TWNAMINGYAQNGLAN--NVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
                G++++  + NAL+ MYA+CG++  A  IF G+  + +VSW A++  Y +HG G+ 
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEV 298

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A+ LF+EM R G  PD  + + VL AC ++GL+  G+  F  +E+ YGLRP  EH++CMV
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGRAGRL+EA  LI S        LW  L+   K+  N + + LA +++++LEP + G
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTG 418

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            ++L+SN+Y   G L+   +VR  M   +L K+ GCS++E   ++H F A  ++HP++ E
Sbjct: 419 YYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNE 478

Query: 729 IYSKLDLLNDEMK 741
           IY KL+ L + +K
Sbjct: 479 IYKKLNELENLVK 491



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 193/415 (46%), Gaps = 14/415 (3%)

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M RS    N  T    +++C+ L   I G+Q+H    K+G     FV TSLISMY     
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 210 FREAENVF--RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
              A  +F     + K   C N ++  Y      +    +F  +     E N  T   ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 268 SVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
             C    NLG+  G  +HG  VKFG+  + SVGN ++TMY K G  +   ++FD +  + 
Sbjct: 121 QPCGIPGNLGL--GMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKG 178

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
           LI+W A+I+GY ++G     +  + E    G C D   L  V+  C+    L +G ++  
Sbjct: 179 LITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
                G+ S+  L  ALV++YA+ G+LK AR + DG   K    + AI+ G+   +    
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGY--GMHGQG 296

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI---KTGYAADVIVG 502
           E  + LF +    G++PD   F  +LS + S A L   + L  + +   K G        
Sbjct: 297 EVAVGLFDEMIRGGIKPDGTAFVSVLS-ACSHAGLTN-KGLDYFGVMERKYGLRPGAEHY 354

Query: 503 NALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFEEM 556
           + ++ +  + G ++ A ++ + +  R D   W A+L A  +H   + A L FE++
Sbjct: 355 SCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQV 409



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 184/405 (45%), Gaps = 6/405 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT--WTSLIKGY 134
           G+ +H  + K+G   + F   +LI++Y K + +D A+KLFD       +T  + SL+ GY
Sbjct: 29  GKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGY 88

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
             +   + V+ + C+M     + N  T   +++ C +  +   G  +H F +K G + + 
Sbjct: 89  ALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDS 148

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            VG  L++MY  SG       +F  +  K +   N MI  Y + G +     ++  + S 
Sbjct: 149 SVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESK 208

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
            F P+  T   V+S C     +  GK++      FG      + NA+V MY + G  ++A
Sbjct: 209 GFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKA 268

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
             +FD +  ++++SWTA+I GY   G G  A+  F E +  GI  D +   +V+  CS  
Sbjct: 269 RDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHA 328

Query: 375 SNLELGLQLHG-FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
                GL   G    K+G        + +VD+  + G L  AR L++    +        
Sbjct: 329 GLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGA 388

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
           L G   KI  + E   + F Q  +  +EP    +  LLS   ++A
Sbjct: 389 LLGAC-KIHRNVELAELAFEQ--VIELEPTNTGYYVLLSNVYTEA 430



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 2/264 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G+L LG  VH F +K G   D+   N L+ +Y K   +D  +KLFD M  +  ITW ++I
Sbjct: 127 GNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMI 186

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G   +VL +  +M       +  T   +L +C+ L     G+++       GF 
Sbjct: 187 NGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFS 246

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +N F+  +L++MY   G  ++A ++F G+  K V     +I  Y   G+ E+A  +F  +
Sbjct: 247 SNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEM 306

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVGNAIVTMYGKHGM 310
           +    +P+   F +V+S C       +G    G +  K+G+       + +V + G+ G 
Sbjct: 307 IRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGR 366

Query: 311 SEEAERMFDAISER-NLISWTALI 333
             EA  + +++  R +   W AL+
Sbjct: 367 LNEARELIESMQVRADGALWGALL 390



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 18/217 (8%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L +G+ V   +   G  ++ F  N L+N+YA+   L  A+ +FDGM V+S ++WT++I
Sbjct: 228 GALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAII 287

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL--LEDR---IFGEQIHAFAI 186
            GY   G  E  +G+  +M R   K +      +L ACS   L ++    FG     + +
Sbjct: 288 GGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGL 347

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE----SE 242
           + G E+     + ++ +   +G   EA  +   +  +    +   +L   K       +E
Sbjct: 348 RPGAEHY----SCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAE 403

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +AF   + L     EP +  +  ++S  Y   G  EG
Sbjct: 404 LAFEQVIEL-----EPTNTGYYVLLSNVYTEAGNLEG 435


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/605 (31%), Positives = 313/605 (51%), Gaps = 6/605 (0%)

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG---EQIHAFAIKSGFENNVFV 196
           Y S L +      +++  NE T        SL++D I      QI+A  + +G +   F+
Sbjct: 50  YSSSLNLTTHFNNNKDDCNESTFKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFL 109

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              L++   + G    A  +F      DV   N ++  Y++ G    A  ++  +  +  
Sbjct: 110 IAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACV 169

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ ++F  V+  C     +E G+++HG   + G   ++ V N +V +Y K G    A  
Sbjct: 170 SPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANA 229

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  + +R ++SWT++ISGY ++G   +A+  F E     +  D   L +V+   +   +
Sbjct: 230 VFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVED 289

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           LE G  +HG  IK G   +  L  +L  +YAK G +  AR+  +         +NA++SG
Sbjct: 290 LEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISG 349

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           +++      E+ + LF   +   + PD +T +  ++  A    L   R +  Y   + + 
Sbjct: 350 YVKN--GYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFR 407

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            DVIV  +LI  YAKCGS+D A  +F  I D+D+V W+AM+  Y LHG G+ +++LF  M
Sbjct: 408 NDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAM 467

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           ++ G +P+D++ +G+L AC  SGL E G  LF+ +   YG+ P  +H+AC+VDLLGRAG 
Sbjct: 468 RQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGH 526

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L  A N + + P      +W  L+S  K+  +      A++RL  L+P + G ++ +SN+
Sbjct: 527 LDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNL 586

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           YA   + D  AKVR  M +  L+K  G S IEI+ KL  F A  K HP S+EI+ +++ L
Sbjct: 587 YASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDL 646

Query: 737 NDEMK 741
              +K
Sbjct: 647 ERRLK 651



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 211/465 (45%), Gaps = 3/465 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           ++A LL +G Q   F    L+N  +    +  A+KLFD         W ++++ Y   G 
Sbjct: 94  IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGF 153

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
           +   + +   M  +    +  +   +L+ACS L     G ++H    + GFE++VFV   
Sbjct: 154 FGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNG 213

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+++Y   G    A  VF  L  + +     +I  Y + G+   A  +F  +  ++  P+
Sbjct: 214 LVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPD 273

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
                +V+    +   +E GK +HG  +K G+  E  +  ++ ++Y K G    A   F+
Sbjct: 274 WIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFN 333

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            +   +LI W A+ISGYV++G+  +AI  F       I  DS  + + I  C+   +LEL
Sbjct: 334 QVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLEL 393

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
              +  +     + +DV + T+L+D YAK G +  AR + D    K    ++A++ G+  
Sbjct: 394 ARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGY-- 451

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
            +     + ++LF   R AG+ P+ VTF  LL+   +   +  G  L       G     
Sbjct: 452 GLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRH 511

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
                ++ +  + G +D A+     +     VS W A+LSA  +H
Sbjct: 512 QHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 160/355 (45%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K       L++G+ VH  + + G ++D F  N L+ LYAK   +  A  +F  ++
Sbjct: 176 FPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLV 235

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ ++WTS+I GY  +G     L I  +M ++  + +      +L A + +ED   G+ 
Sbjct: 236 DRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKS 295

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   IK G E    +  SL S+Y   G    A   F  +    +   N MI  Y K G 
Sbjct: 296 IHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGY 355

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +E A  +F  + S +  P+  T T+ I+ C +   +E  + +           ++ V  +
Sbjct: 356 AEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTS 415

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++  Y K G  + A  +FD I +++++ W+A++ GY   G G ++I  F      G+  +
Sbjct: 416 LIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPN 475

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
                 ++  C     +E G  L      +G     +    +VD+  + G L  A
Sbjct: 476 DVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRA 530


>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 201/664 (30%), Positives = 335/664 (50%), Gaps = 27/664 (4%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H   +KSG+    + ANN+I+ YAK   + +A K+FD    R A++W ++I G ++ G++
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
           E+ L     M R     + ++   IL+  + +     G+Q+H+  +K G+E NVF G++L
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSAL 141

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           + MY       +A  VF+ +  ++    N +I  Y   G+   AF +   +     E +D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDD 201

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD- 319
            TF  ++++  +    +   Q+H   VK G+  + +V NAI+T Y + G  E+AER+FD 
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
           AI  R+L++W ++++ Y+ +    +A   FLE   LG   D     +VI      ++   
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQ 321

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKG--GDLKSARMLLDGFSCKYTAEFNAILSGF 437
           G  LHG  IK G    V +  +L+ +Y K     +  A  + +    K    +N+IL+GF
Sbjct: 322 GKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGF 381

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +  +   ED +  F   R   +  D   FS +L   +  A L  G+ +H          
Sbjct: 382 SQ--SGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL-------- 431

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
                         CG I+ A + F        ++WN+++  YA HG GK AL LF  MK
Sbjct: 432 --------------CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMK 477

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
                 D I+ + VL AC + GL E G      +E  YG+ P +EH+ACM+DLLGRAGRL
Sbjct: 478 DRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRL 537

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
            EA  LI + PF    ++W+TL+   +   + + +   +  LL+LEP++  +++L+S+M+
Sbjct: 538 DEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMF 597

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
                 +E A ++  M +  + K  G SWIE+ +++H F A  + HP  EEIY +L  L 
Sbjct: 598 GHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVHSFNAEDRSHPNCEEIYLRLGDLM 657

Query: 738 DEMK 741
           +E++
Sbjct: 658 EEIR 661



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 229/477 (48%), Gaps = 37/477 (7%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G +++GQ VH+ ++K G + + F  + L+++YAK  R++ A ++F  + +R+++TW +LI
Sbjct: 114 GYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALI 173

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY   GD  +   +   M     + ++ T + +L      +      Q+HA  +K G  
Sbjct: 174 SGYAHVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLA 233

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRG-LAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           ++  V  ++I+ Y   G   +AE VF G +  +D+   N M+  Y    + E AF +F+ 
Sbjct: 234 SDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLE 293

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-HG 309
           +    FEP+ YT+T+VIS  +E     +GK LHGL +K G+   + + N+++ MY K H 
Sbjct: 294 MQVLGFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHS 353

Query: 310 MS-EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
            S +EA  +F+++  ++ +SW ++++G+ +SG    A+  F       +  D    + V+
Sbjct: 354 KSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVL 413

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS  + L+LG Q+H                         G ++ AR   D      + 
Sbjct: 414 RSCSDLATLQLGQQVHVLC----------------------GVIEDARKSFDATPKDSSI 451

Query: 429 EFNAILSGFME----KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
            +N+++ G+ +    KIA    D+  L   +R+   + D +TF  +L+  +    +  G 
Sbjct: 452 AWNSLIFGYAQHGRGKIA---LDLFFLMKDRRV---KLDHITFVAVLTACSHIGLVEEGW 505

Query: 485 S-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
           S L +     G    +     +I +  + G +D A  + + +  + D + W  +L A
Sbjct: 506 SFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGA 562



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 83/173 (47%), Gaps = 3/173 (1%)

Query: 470 LLSLSASQ-ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
           L SLS S    L R    H  +IK+G  A +   N +I+ YAKCG I  A ++F   S R
Sbjct: 4   LHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQR 63

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D VSWN M++     G  + AL   + MKR GFA D  S   +L+     G  E G  + 
Sbjct: 64  DAVSWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH 123

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           + I +I G    +   + ++D+  +  R+ +A  +  S     S + W  L+S
Sbjct: 124 SMIVKI-GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNS-VTWNALIS 174


>gi|15225505|ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099847|sp|O80647.1|PP195_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g39620
 gi|3355489|gb|AAC27851.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254604|gb|AEC09698.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 193/616 (31%), Positives = 326/616 (52%), Gaps = 18/616 (2%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           ++ LI++Y     L  A+ +F+ +  +   +W +++  Y  +G +E VL +   M   + 
Sbjct: 237 SSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDV 296

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + N+   +  L+A + + D + G  IH +A++ G   +V V TSL+SMY   G    AE 
Sbjct: 297 RMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQ 356

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F  +  +DV   + MI  Y +AG+ + A  +F  ++    +PN  T T+V+  C     
Sbjct: 357 LFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAA 416

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
              GK +H  A+K  +  E+    A+++MY K G    A + F+ +  ++ +++ AL  G
Sbjct: 417 SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQG 476

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           Y + G   KA + +      G+C DS  +  ++  C+ CS+   G  ++G  IKHG+ S+
Sbjct: 477 YTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSE 536

Query: 396 VRLGTALVDIYAKGGDLKSARMLLD--GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
             +  AL++++ K   L +A +L D  GF  K T  +N +++G++  +    E+ +  F 
Sbjct: 537 CHVAHALINMFTKCDALAAAIVLFDKCGFE-KSTVSWNIMMNGYL--LHGQAEEAVATFR 593

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           Q ++   +P+ VTF  ++  +A  + L  G S+H+  I+ G+ +   VGN+L+ MYAKCG
Sbjct: 594 QMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCG 653

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            I+ + + F  IS++ IVSWN MLSAYA HGL   A+ LF  M+     PD +S L VL 
Sbjct: 654 MIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLS 713

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC ++GL E G  +F E+ + + +   +EH+ACMVDLLG+AG   EA+ ++       S 
Sbjct: 714 ACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSV 773

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
            +W  L++ S++  N   S  A  +L+ LEP       L  + Y+    L E   V    
Sbjct: 774 GVWGALLNSSRMHCNLWLSNAALCQLVKLEP-------LNPSHYSQDRRLGEVNNVS--- 823

Query: 694 NDLRLSKEAGCSWIEI 709
              R+ K   CSWIE+
Sbjct: 824 ---RIKKVPACSWIEV 836



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 168/648 (25%), Positives = 308/648 (47%), Gaps = 38/648 (5%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K   GS D K G  +H  + + G ++D +    L+ +Y K   L  A+++FD M V+  
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           +TW +++ G   +G   + L +  DM       +  +   ++ A S LE       +H  
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGL 226

Query: 185 AIKSGFENNVFVGTS-LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            IK GF   +F  +S LI MY +      AE+VF  +  KD      M+  Y   G  E 
Sbjct: 227 VIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEE 283

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +F  + + D   N     + +        + +G  +H  AV+ G++ ++SV  ++++
Sbjct: 284 VLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMS 343

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G  E AE++F  I +R+++SW+A+I+ Y ++G   +AI+ F + + + I  ++  
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           L +V+ GC+  +   LG  +H +AIK    S++   TA++ +YAK G    A    +   
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K    FNA+  G+ +    D      ++   +L G+ PD  T   +L   A  +   RG
Sbjct: 464 IKDAVAFNALAQGYTQ--IGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG 521

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
             ++   IK G+ ++  V +ALI M+ KC ++  A  +F     ++  VSWN M++ Y L
Sbjct: 522 SCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQAC-----------IYSGLSEGGICLFNEI 591
           HG  + A+  F +MK E F P+ ++ + +++A            ++S L + G C    +
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPV 641

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRL--SEAMNLINSSPFSESPLLWRTLVS--VSKLMA 647
                          +VD+  + G +  SE   +  S+ +  S   W T++S   +  +A
Sbjct: 642 GN------------SLVDMYAKCGMIESSEKCFIEISNKYIVS---WNTMLSAYAAHGLA 686

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           +   S+  S +  +L+P D+ SF+ V +     G+++E  ++   M +
Sbjct: 687 SCAVSLFLSMQENELKP-DSVSFLSVLSACRHAGLVEEGKRIFEEMGE 733



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 276/565 (48%), Gaps = 14/565 (2%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           VH  L+ SG +      N LIN Y+ F R D+++ +FD +     + W S+I+GY   G 
Sbjct: 24  VHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79

Query: 140 YESVLGIACDMYRSEEK---FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +   LG     Y SEEK    ++++ +  L+AC+   D   G +IH    + G E++V++
Sbjct: 80  HREALGFF--GYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GT+L+ MY  +     A  VF  +  KDV   N M+    + G S  A  +F  + S   
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           + +  +  N+I    +    +  + LHGL +K G +   S G  ++ MY        AE 
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAAES 255

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F+ +  ++  SW  +++ Y  +G   + +  F    +  +  +    A+ +   +   +
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G+ +H +A++ G + DV + T+L+ +Y+K G+L+ A  L      +    ++A+++ 
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           + +  A   ++ + LF       ++P+ VT + +L   A  A    G+S+H Y+IK    
Sbjct: 376 YEQ--AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           +++    A+I+MYAKCG    A + F+ +  +D V++NA+   Y   G    A  +++ M
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
           K  G  PD  +++G+LQ C +      G C++ +I + +G          ++++  +   
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAHALINMFTKCDA 552

Query: 617 LSEAMNLINSSPFSESPLLWRTLVS 641
           L+ A+ L +   F +S + W  +++
Sbjct: 553 LAAAIVLFDKCGFEKSTVSWNIMMN 577



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 222/475 (46%), Gaps = 5/475 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL  G A+H + ++ G   D   A +L+++Y+K   L++A++LF  +  R  ++W+++I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y   G ++  + +  DM R   K N  T + +L+ C+ +     G+ IH +AIK+  E
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           + +   T++ISMY   G F  A   F  L  KD    N +   Y + G++  AF V+ ++
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 P+  T   ++  C        G  ++G  +K G   E  V +A++ M+ K    
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDAL 553

Query: 312 EEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             A  +FD    E++ +SW  +++GY+  G   +A+  F +        ++     ++  
Sbjct: 554 AAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRA 613

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            +  S L +G+ +H   I+ G+ S   +G +LVD+YAK G ++S+       S KY   +
Sbjct: 614 AAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSW 673

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAY 489
           N +LS +           + LF   +   ++PD V+F  +LS       +  G R     
Sbjct: 674 NTMLSAYAAH--GLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEM 731

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
             +    A+V     ++ +  K G    A ++ + +  +  V  W A+L++  +H
Sbjct: 732 GERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 13/216 (6%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           C N    LQ+HG  I    +S ++    L++ Y+       +R++ D         +N++
Sbjct: 15  CKNFRCLLQVHGSLI----VSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSM 70

Query: 434 LSGFMEKIADDEEDVMVLF---SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           + G+    A    + +  F   S+++  G++PD  +F+  L   A      +G  +H   
Sbjct: 71  IRGYTR--AGLHREALGFFGYMSEEK--GIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
            + G  +DV +G AL+ MY K   +  A Q+F  +  +D+V+WN M+S  A +G    AL
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           LLF +M+      D +S+  ++ A   S L +  +C
Sbjct: 187 LLFHDMRSCCVDIDHVSLYNLIPA--VSKLEKSDVC 220


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 170/498 (34%), Positives = 269/498 (54%), Gaps = 3/498 (0%)

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A   F  +   + +PND+TF               GKQ+H +A+K G + +  VG +   
Sbjct: 42  ALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFD 101

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K G+  EA+R+FD +  RN+  W A IS  V  G  GKAI+ F+EF  +G   D   
Sbjct: 102 MYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLIT 161

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
               ++ C+    L+LG QLHG  I+ G+  DV +   ++D+Y K  +++ A M+ +G  
Sbjct: 162 FCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMG 221

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            + +  +  +++   +   D++E   V+F   R  G+E      S ++S  A  + L  G
Sbjct: 222 RRNSVSWCTMVAACEQN--DEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFG 279

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           RS+HA ++K     D+ VG+AL+ MY KCGSI+   Q+F  + +R++VSWNAM+S YA  
Sbjct: 280 RSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQ 339

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G    A+ LFEEM+ E  A + ++++ VL AC   G  + G  +F  +   Y + P  EH
Sbjct: 340 GDVDMAMTLFEEMQSEAVA-NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEH 398

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           +AC+ D+LGRAG +  A   +   P   +  +W  L++  ++    +   +A+  L  L+
Sbjct: 399 YACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLD 458

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           PKD+G+ +L+SNM+A  G  DEA  VR  M D+ + K AGCSW+   +K+H F A    H
Sbjct: 459 PKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSH 518

Query: 724 PESEEIYSKLDLLNDEMK 741
             + EI + L  L  EM+
Sbjct: 519 ERNSEIQAMLVKLRTEMQ 536



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 214/455 (47%), Gaps = 16/455 (3%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y+K +  + AQ L      R  +TWT+LI G + +G + S L     M R   K N+ T
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
                +A + L     G+QIHA A+K G  N+ FVG S   MY  +G   EA+ +F  + 
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            ++V   N  I      G    A   F+       EP+  TF   ++ C +   ++ G+Q
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           LHGL ++ G   ++SV N I+ +YGK    E AE +F+ +  RN +SW  +++   ++  
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             KA   FL     GI      +++VI   +  S LE G  +H  A+K     D+ +G+A
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           LVD+Y K G ++    +      +    +NA++SG+  +   D +  M LF + +   + 
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQ--GDVDMAMTLFEEMQSEAV- 357

Query: 462 PDPVTFSRLLSLSASQACLVRGRSL-----HAYSIKTGYAADVIVGNALITMYAKCGSID 516
            + VT   +LS  +    +  G  +       Y I+ G      + +    M  + G ++
Sbjct: 358 ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIAD----MLGRAGMVE 413

Query: 517 GAFQIFKGISDRDIVS-WNAMLSAYALHG---LGK 547
            A++  + +  R  +S W A+L+A  ++G   LGK
Sbjct: 414 RAYEFVQKMPIRPTISVWGALLNACRVYGEPELGK 448



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 147/307 (47%), Gaps = 1/307 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +HA  LK G  ND F   +  ++Y+K      AQ+LFD M  R+   W + I   + 
Sbjct: 77  GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVL 136

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           DG     +    +  R   + +  T    L AC+       G Q+H   I+SGFE +V V
Sbjct: 137 DGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSV 196

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              +I +Y        AE VF G+  ++      M+    +  E E A  VF+       
Sbjct: 197 ANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGI 256

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E  DY  ++VIS      G+E G+ +H LAVK  V  +I VG+A+V MYGK G  E+ E+
Sbjct: 257 ELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQ 316

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  + ERNL+SW A+ISGY   G    A+  F E     +  +   L  V+  CS    
Sbjct: 317 VFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGA 375

Query: 377 LELGLQL 383
           ++LG ++
Sbjct: 376 VKLGNEI 382



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 130/264 (49%), Gaps = 3/264 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L LG+ +H  +++SG + D   AN +I++Y K   +++A+ +F+GM  R++++W +++  
Sbjct: 175 LDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAA 234

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
              + + E    +     +   +  ++  S ++ A + +    FG  +HA A+K+  E +
Sbjct: 235 CEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGD 294

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FVG++L+ MY   G   + E VF  +  +++   N MI  Y   G+ +MA  +F   + 
Sbjct: 295 IFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEE-MQ 353

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           S+   N  T   V+S C     V+ G ++   +  ++ +         I  M G+ GM E
Sbjct: 354 SEAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVE 413

Query: 313 EAERMFDAISERNLIS-WTALISG 335
            A      +  R  IS W AL++ 
Sbjct: 414 RAYEFVQKMPIRPTISVWGALLNA 437



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 6/128 (4%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G   L+ G++VHA  +K+  + D F  + L+++Y K   ++  +++F  M  R+ ++W +
Sbjct: 272 GISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNA 331

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL-----LEDRIFGEQIHAF 184
           +I GY   GD +  + +  +M +SE   N  T   +L ACS      L + IF      +
Sbjct: 332 MISGYAHQGDVDMAMTLFEEM-QSEAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRY 390

Query: 185 AIKSGFEN 192
            I+ G E+
Sbjct: 391 RIEPGAEH 398



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 14/140 (10%)

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           MY+K    + A  + +    R +V+W A++S    +G    ALL F +M+RE   P+D +
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYG----LRPILEHFA--CMVDLLGRAGRLSEAM 621
                +A          +CL    +QI+     L  I + F      D+  + G   EA 
Sbjct: 61  FPCAFKA-------STALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQ 113

Query: 622 NLINSSPFSESPLLWRTLVS 641
            L +  P   +  +W   +S
Sbjct: 114 RLFDEMP-PRNVAVWNAYIS 132


>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
          Length = 591

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 190/580 (32%), Positives = 310/580 (53%), Gaps = 24/580 (4%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSG----------FENNVFVG-TSLISMYFHSGCFR 211
           S +L +C    D   G  +HA  +K+           +  +V V   +L+SMY   G   
Sbjct: 15  SGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRRE 74

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY-TFTNVISVC 270
           +A  VF  +  +D    N +I     AG+   A  +F  +L SD    D  TFT V+S C
Sbjct: 75  DAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSEC 131

Query: 271 YEN--LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
                  +     +HGL V  G   E+ VGNA+VT Y + G    AER+F  ++E+N+I+
Sbjct: 132 ARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVIT 191

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           WTA+ISG  R+    ++ + F + +   +  +++  +  +  C+       G Q+HG  +
Sbjct: 192 WTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCTLLACARSLAAREGQQVHGLVV 250

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE--FNAILSGFMEKIADDEE 446
           K G+ +D+ + + L+D+Y+K G ++ A  +    SC+   E     IL GF +     EE
Sbjct: 251 KAGFEADLHVESGLMDVYSKCGLMEDALTVFR--SCREPDEVFLTVILVGFAQN--GLEE 306

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
               LF++   AG E D  T S +L    + A    G+ +HA  IK  +  +  V N L+
Sbjct: 307 KAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLV 366

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MY+KCG +  + Q+F  +  ++ VSWN++++A+A HG G     LFE MK +G  P D+
Sbjct: 367 NMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDV 426

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + L +L AC + G ++ G+ + N +   YG+ P +EH+AC+VD+LGRAG L +A + I  
Sbjct: 427 TFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIED 486

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            PF++S LLW+ L+       NS+    A+++LL L+P    +++L+SN+Y+ +G  D+ 
Sbjct: 487 GPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDR 546

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
           AKV   M+++ L K+ G SWIE++ ++H FV     HP S
Sbjct: 547 AKVMKRMSEMGLRKDTGKSWIELEKEVHSFVVRSTSHPNS 586



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 234/489 (47%), Gaps = 22/489 (4%)

Query: 72  GDLKLGQAVHAFLLKSGS-----------QNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           GDL+LG A+HA ++K+ +           ++     N L+++YA+  R + A ++FD M 
Sbjct: 25  GDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRREDAARVFDEMR 84

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFG- 178
           VR A++W SLI      GD    L +   M RS+ +  +  T + +L  C+         
Sbjct: 85  VRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSECARAGAASLPA 141

Query: 179 -EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
              +H   +  GFE  V VG +L++ YF  G    AE VF G+A K+V     MI    +
Sbjct: 142 CAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMAR 201

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           A   + +F +F  ++ +  + N+ T++  +  C  +L   EG+Q+HGL VK G   ++ V
Sbjct: 202 AELYKESFSLFGQMIRT-VDANNATYSCTLLACARSLAAREGQQVHGLVVKAGFEADLHV 260

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            + ++ +Y K G+ E+A  +F +  E + +  T ++ G+ ++G   KA   F E +  G 
Sbjct: 261 ESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGN 320

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D + ++TV+      +   LG Q+H   IK  +  +  +   LV++Y+K G+L+ +  
Sbjct: 321 EIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQ 380

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K +  +N+I++ F       E  V  LF   +  G +P  VTF  LL   +  
Sbjct: 381 VFDEMPSKNSVSWNSIIAAFARHGHGSE--VYQLFESMKADGAKPTDVTFLSLLHACSHV 438

Query: 478 ACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK-GISDRDIVSWNA 535
               +G   L++ S + G    +     ++ M  + G +D A    + G      + W A
Sbjct: 439 GSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQA 498

Query: 536 MLSAYALHG 544
           ++ A + HG
Sbjct: 499 LMGACSFHG 507



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 167/354 (47%), Gaps = 6/354 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G+  L     VH  ++  G + +    N L+  Y +      A+++F GM  ++ ITWT+
Sbjct: 135 GAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTA 194

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G      Y+    +   M R+ +  N  T S  L AC+       G+Q+H   +K+G
Sbjct: 195 MISGMARAELYKESFSLFGQMIRTVDA-NNATYSCTLLACARSLAAREGQQVHGLVVKAG 253

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           FE ++ V + L+ +Y   G   +A  VFR     D   +  +++ + + G  E AF +F 
Sbjct: 254 FEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFA 313

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGK 307
            ++ +  E ++ T + V+     +     GKQ+H L +K  FGV     V N +V MY K
Sbjct: 314 EMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGV--NTYVCNGLVNMYSK 371

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G   E+ ++FD +  +N +SW ++I+ + R GHG +    F      G         ++
Sbjct: 372 CGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSL 431

Query: 368 IDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +  CS   + + GL+ L+  + ++G L  +     +VD+  + G L  A+  ++
Sbjct: 432 LHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIE 485


>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
          Length = 810

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 193/639 (30%), Positives = 331/639 (51%), Gaps = 17/639 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L +G+AVH  +L+   + D F   +L+N+YAK   +  A + F  M VR+ ++WT+ I 
Sbjct: 185 ELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIA 244

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G++ D +  S + +  +M R+    N++T + IL AC+ +       QIH   +K+    
Sbjct: 245 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 304

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  V  +LIS Y + G    +E VF        R +    +    +G S  +    V LL
Sbjct: 305 DCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFI----SGVSNHSLLRSVQLL 360

Query: 253 SSDF----EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
              F     PND  + +V S       +E G QLH  A+K G +  I VG+A+ TMY + 
Sbjct: 361 RRMFHQGLRPNDKCYASVFSSVNS---IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRC 417

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              +++ ++F+ + ER+ +SWTA+++G+   GH  +A   F   +  G   D   L  ++
Sbjct: 418 DNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAIL 477

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+    L  G ++HG  ++  Y     +    + +Y+K   +++AR + D   CK   
Sbjct: 478 SACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQV 536

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +++++SG+      +E   + LF     A +  D    S +LSL A  A     + LH 
Sbjct: 537 MWSSMISGYATNGCGEE--AISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHG 594

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y+IK G  +D  V ++L+ +Y++ G++D + ++F  IS  D+V+W  ++  YA HG  + 
Sbjct: 595 YAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQN 654

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL +F+ M + G  PD + ++ VL AC  +GL E G   FN +   YG+ P L+H+ CMV
Sbjct: 655 ALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMV 714

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGR+GRL+EA   ++S P     ++W TLV+  ++  ++        ++ +    D+G
Sbjct: 715 DLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDTVLGRFVENKIREGN-YDSG 773

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           SF  +SN+ A  G  +E A++R TM    ++KE G S +
Sbjct: 774 SFATLSNILANSGDWEEVARIRKTMKG--VNKEPGWSMV 810



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 243/506 (48%), Gaps = 22/506 (4%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + V+    K G   + +    +++L AK  RL  A ++F      SA+ W + + G + +
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 138 GDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           G+     G+A +M+R       + N  T S  L AC+  E+   G  +H   ++   E +
Sbjct: 149 GEG----GLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYD 204

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VFVGTSL++MY   G    A   F  +  ++V      I  + +  E   A  +   ++ 
Sbjct: 205 VFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVR 264

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +    N YT T+++  C +   V E  Q+HG+ +K  +  +  V  A+++ Y   G  E 
Sbjct: 265 NGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIEL 324

Query: 314 AERMFD---AISERNLISWTALISGYVRSGHG-GKAINGFLEFLDLGICCDSSCLATVID 369
           +E++F+    +S R++  W+A ISG   S H   +++         G+  +  C A+V  
Sbjct: 325 SEKVFEEAGTVSNRSI--WSAFISGV--SNHSLLRSVQLLRRMFHQGLRPNDKCYASVF- 379

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             S  +++E G QLH  AIK G++  + +G+AL  +Y++  +++ +  + +    +    
Sbjct: 380 --SSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVS 437

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A+++GF         +  + F    L G +PD V+ + +LS      CL++G+ +H +
Sbjct: 438 WTAMVAGFATH--GHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGH 495

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           +++  Y     + +  I+MY+KC  +  A +IF     +D V W++M+S YA +G G+ A
Sbjct: 496 TLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEA 554

Query: 550 LLLFEEMKREGFAPDDISILGVLQAC 575
           + LF+ M       D      +L  C
Sbjct: 555 ISLFQLMVAASIRIDSYICSSILSLC 580



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 224/468 (47%), Gaps = 18/468 (3%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           EQ++  A K G   N +V T ++ +   SG  R+A  VF         C N  +    + 
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           GE  +A  +F  ++    EPN +T++  +S C     +  G+ +HGL ++     ++ VG
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            ++V MY K G    A R F  +  RN++SWT  I+G+V+      A+    E +  G+ 
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +     +++  C+  S +    Q+HG  +K     D  +  AL+  Y   G ++ +  +
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 328

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL-----AGMEPDPVTFSRLLSL 473
              F    T    +I S F+  +++      +L S Q L      G+ P+   ++ + S 
Sbjct: 329 ---FEEAGTVSNRSIWSAFISGVSNHS----LLRSVQLLRRMFHQGLRPNDKCYASVFS- 380

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
             S   +  G  LH+ +IK G+   ++VG+AL TMY++C ++  ++++F+ + +RD VSW
Sbjct: 381 --SVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSW 438

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            AM++ +A HG    A L F  M  +GF PD +S+  +L AC  S     G  +     +
Sbjct: 439 TAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLR 498

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +YG    +    C + +  +   +  A  + +++P  +  ++W +++S
Sbjct: 499 VYGETTFIND--CFISMYSKCQGVQTARRIFDATPCKDQ-VMWSSMIS 543



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 152/313 (48%), Gaps = 12/313 (3%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+ +++ N ++ C         +Q++  A K G+     V   +V +  K G   +A R+
Sbjct: 67  PSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSN 376
           F      + + W A +SG VR+G GG A+  F + +  G C  +S   +  +  C+    
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV-WGSCEPNSFTYSGALSACAAGEE 185

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L +G  +HG  ++     DV +GT+LV++YAK GD+ +A         +    +   ++G
Sbjct: 186 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAG 245

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGY 495
           F++   D+    M+L  +    G+  +  T + +L L+ +Q  +VR  S +H   +KT  
Sbjct: 246 FVQD--DEPVSAMLLLREMVRNGVAINKYTATSIL-LACAQMSMVREASQIHGMVLKTEM 302

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFK---GISDRDIVSWNAMLSAYALHGLGKGALLL 552
             D +V  ALI+ Y   G I+ + ++F+    +S+R I  W+A +S  + H L +   LL
Sbjct: 303 YLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLRSVQLL 360

Query: 553 FEEMKREGFAPDD 565
              M  +G  P+D
Sbjct: 361 -RRMFHQGLRPND 372


>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Brachypodium distachyon]
          Length = 689

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 202/662 (30%), Positives = 338/662 (51%), Gaps = 11/662 (1%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNR-LDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           HA LLKS   + T   N L+  Y+     L  A+++FD +    A +W SL+  ++  G 
Sbjct: 13  HATLLKSCIISPT-RWNQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGA 71

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
           + +   +   M+      N       L + +       G Q+ + A KSG  +NVF  ++
Sbjct: 72  HPAAWCLLRAMHAQGVAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASA 131

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ MY   G  R+A  VF G+  ++    N +I  Y ++G+   A  +F+++ +    P+
Sbjct: 132 LLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPD 191

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
           + TF  +++  +++       QLHG  VK+G    ++V NA +T Y + G   E+ R+FD
Sbjct: 192 EATFAALLTA-FDDSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFD 250

Query: 320 AISE-RNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSNL 377
            I + R+LISW A++  Y   G    A+  F+  + + G+  D     ++I  C    + 
Sbjct: 251 QIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDDH 310

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGD--LKSARMLLDGFSCKYTAEFNAIL 434
           + G  +HG  IK+G      +  AL+ +Y +  G+  ++ A    D    K T  +N++L
Sbjct: 311 Q-GRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSML 369

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G+ +   +   D +  F   + A +  D   FS  L   +  A L  GR +H   I +G
Sbjct: 370 TGYSQH--NLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSG 427

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           +A++  V ++LI MY+K G +D A + F+       V WN+M+  YA HG       LF 
Sbjct: 428 FASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFN 487

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           EM       D ++ +G++ +C ++GL + G  + N +E  YG+   +EH+AC VDL GRA
Sbjct: 488 EMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGRA 547

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G+L +A  LI+S PF    ++W TL+   ++  N + +   +  LL  EPK   ++IL+S
Sbjct: 548 GQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNMELASEVASHLLVSEPKQHSTYILLS 607

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           +MY+G GM  + A V+  M +  LSK  G SWIE+ +++H F A  + HP  +EIY  L 
Sbjct: 608 SMYSGLGMWSDRAIVQREMKNRGLSKVPGWSWIEVKNEVHSFNAEDRSHPRMDEIYEMLS 667

Query: 735 LL 736
           LL
Sbjct: 668 LL 669



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 236/479 (49%), Gaps = 17/479 (3%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           LG  + +   KSG  ++ F A+ L+++YAK  R+  A+++FDGM  R+ ++W +LI GY+
Sbjct: 109 LGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYV 168

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR--IFGEQIHAFAIKSGFENN 193
           + G     L +  +M       +E T + +L A    +D       Q+H   +K G    
Sbjct: 169 ESGKVLQALELFINMETERLVPDEATFAALLTA---FDDSNYFLMHQLHGKIVKYGSALG 225

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           + V  + I+ Y   G   E+  +F  +   +D+   N M+  Y   G    A   FV ++
Sbjct: 226 LTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMI 285

Query: 253 -SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK---H 308
             S  + + Y+FT++IS C E+    +G+ +HGL +K G+     V NA++ MY +   +
Sbjct: 286 RESGVQLDMYSFTSIISTCPEH-DDHQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGN 344

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
            M E+A + FD++  ++ +SW ++++GY +      A+  F       I CD    +  +
Sbjct: 345 CMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAAL 404

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS  + L+LG Q+HG  I  G+ S+  + ++L+ +Y+K G L  A+   +      + 
Sbjct: 405 RSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSV 464

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N+++ G+ +        V  LF++     +  D VTF  L++ S S A LV   S   
Sbjct: 465 PWNSMIFGYAQH--GHAHIVHSLFNEMVELKVPLDHVTFVGLIT-SCSHAGLVDEGSEIL 521

Query: 489 YSIKTGYAADVIVGNAL--ITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
            +++T Y   + + +    + +Y + G ++ A ++   +  + D + W  +L A  +HG
Sbjct: 522 NAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHG 580



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG+ +H  ++ SG  ++ F +++LI +Y+K   LD A+K F+     S++ W S+I G
Sbjct: 413 LQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFG 472

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIFGEQIHAFAIKSGF 190
           Y   G    V  +  +M   +   +  T   ++ +CS   L+++    E ++A   + G 
Sbjct: 473 YAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEG--SEILNAMETRYGI 530

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA-GESEMAFHVFV 249
              +      + +Y  +G   +A+ +   + ++    V   +L   +  G  E+A  V  
Sbjct: 531 PLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNMELASEVAS 590

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGV 276
           HLL S  EP  ++   ++S  Y  LG+
Sbjct: 591 HLLVS--EPKQHSTYILLSSMYSGLGM 615


>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
 gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
          Length = 695

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 193/638 (30%), Positives = 329/638 (51%), Gaps = 11/638 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGMLVRSAITWTSLIKGYL 135
           + +HA LL  G +  T  A  L+  YA+     L  A ++FDGML R++  W ++IKG +
Sbjct: 61  RRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSFAWNAVIKGLV 120

Query: 136 DDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLL----EDRIFGEQIHAFAIKSGF 190
           D G +   L    DM        +  T   +L+AC+ L    + R   E + A   +   
Sbjct: 121 DAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENVEADIARGIA 180

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + NVFV  +L+ M+   GC  EA NVF  +  +D+     MI      G+      +   
Sbjct: 181 KCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLKR 240

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + S  F P+      VI  C +   +  G  LHG  VK GV  +  V NA+V MY K   
Sbjct: 241 MKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLNALVDMYCKCAR 300

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            + A  +F +I  +++ISW+ +I+G+ ++     +++ F E +  G+  +S+ LA+++  
Sbjct: 301 LDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPS 360

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            S       G ++H F++++G      L +AL+D Y++ G +K A ++ +          
Sbjct: 361 LSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVVS 420

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N+++ G++  + +D E  + L       G+ PD VT   +L L    + L++G+ LHAY+
Sbjct: 421 NSMIGGYV--VNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYA 478

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           I+   ++   V NAL  MY KCG ++ AF+IF  +++R+ V++N ++S+   HG  + A 
Sbjct: 479 IRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLISSLGKHGHAEQAF 538

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            LF+ MKR+G +PD ++ + +L  C + GL + G+C ++ + + Y + P  EH++C+VDL
Sbjct: 539 FLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNISPDKEHYSCIVDL 598

Query: 611 LGRAGRLSEAMNLI-NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
             R+GRL  A + I N     E  +L   L+S  +       + L ++R+ +  P D G 
Sbjct: 599 YSRSGRLDAAWSFIANLQEVPEIDVL-GCLLSACREHNRMDIAELVAERIFEQNPNDPGY 657

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
            IL+SN+YA  GM  E  ++RT + +  L K  G S I
Sbjct: 658 HILLSNIYASAGMWSEVTRIRTMIEERSLKKRTGNSLI 695



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 175/344 (50%), Gaps = 1/344 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+ G A+H  ++K G   DT   N L+++Y K  RLD A  LF  +  +  I+W+++I 
Sbjct: 265 ELRTGTALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIA 324

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G+  +  Y   + +  +M  S  K N  T + IL + S L    +G++IH F++++G E+
Sbjct: 325 GHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEH 384

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           + F+ ++LI  Y   G  +EAE VF      D+   N MI  Y    +SE A  +   LL
Sbjct: 385 SEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALL 444

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                P+  T  +V+ +C ++  + +GK+LH  A++  +    SV NA+  MY K G  E
Sbjct: 445 KEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLE 504

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +F  ++ERN +++  LIS   + GH  +A   F      G+  D      ++  CS
Sbjct: 505 LAFEIFLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCS 564

Query: 373 VCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSA 415
               ++ GL  +   ++   +S D    + +VD+Y++ G L +A
Sbjct: 565 HEGLIDKGLCFYDSMLRDYNISPDKEHYSCIVDLYSRSGRLDAA 608



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 116/511 (22%), Positives = 237/511 (46%), Gaps = 10/511 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVH----AFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           +P ++K     G ++ G+ V     A + +  ++ + F    L++++AK   L  A+ +F
Sbjct: 148 YPPVLKACAALGVVEQGRKVQENVEADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVF 207

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           + M VR    WT++I G +  GD+  V+ +   M     + +    + ++ AC  +++  
Sbjct: 208 ESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELR 267

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G  +H   +K G   +  V  +L+ MY        A ++F  + +KDV   + +I  ++
Sbjct: 268 TGTALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHS 327

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           +     ++  +F  +++S  +PN  T  +++    E      GK++H  +++ G+     
Sbjct: 328 QNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEF 387

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           + +A++  Y + G  +EAE +F+   + +L+   ++I GYV +     A+      L  G
Sbjct: 388 LASALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEG 447

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D   + +V+  C+  S L  G +LH +AI+H   S   +  AL D+Y K G L+ A 
Sbjct: 448 LRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAF 507

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            +    + + T  +N ++S   +      E    LF   +  G+ PD VTF  LLS  + 
Sbjct: 508 EIFLLMTERNTVTYNTLISSLGKH--GHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSH 565

Query: 477 QACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWN 534
           +  + +G   +   ++    + D    + ++ +Y++ G +D A+     + +  +I    
Sbjct: 566 EGLIDKGLCFYDSMLRDYNISPDKEHYSCIVDLYSRSGRLDAAWSFIANLQEVPEIDVLG 625

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
            +LSA   H     A L+ E +  +   P+D
Sbjct: 626 CLLSACREHNRMDIAELVAERIFEQN--PND 654



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 7/165 (4%)

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC--GSIDGAFQIFKGI 525
           S LL L +  A L   R LHA  +  GY    ++   L+  YA+   G +  A ++F G+
Sbjct: 46  SLLLRLQSGPA-LTEVRRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGM 104

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGG 584
             R+  +WNA++      G    AL  + +M  +G    D  +   VL+AC   G+ E G
Sbjct: 105 LTRNSFAWNAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQG 164

Query: 585 ICLFNEIEQ--IYGLRPILEHFAC-MVDLLGRAGRLSEAMNLINS 626
             +   +E     G+        C +VD+  + G L EA N+  S
Sbjct: 165 RKVQENVEADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFES 209


>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
 gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score =  312 bits (799), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 187/624 (29%), Positives = 313/624 (50%), Gaps = 50/624 (8%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYF------HSGCFREA 213
            + S++L +C+       G+Q+H   I SG   + F+ + L+  Y        +    E 
Sbjct: 80  QSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVET 139

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
            N+FR  ++      N +I  Y K    E A   +  ++S    P+++TF +++  C E 
Sbjct: 140 SNLFRPCSW------NILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGET 193

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             ++ G ++H     +     + V NA+++MYG+ G  + A  +FD + ER+ +SW ++I
Sbjct: 194 QNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMI 253

Query: 334 SGY-----------------------------------VRSGHGGKAINGFLEFLDLGIC 358
           S Y                                   +R G+  +A+    +  + GI 
Sbjct: 254 SCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIH 313

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D   +   +  CS    + LG ++HGF I+H +     +  ALV +YA+  D++ A ML
Sbjct: 314 LDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYML 373

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                 K    +N++LSG         E+ + LF +  L G+EPD VTF+ +L L A  A
Sbjct: 374 FRLNDDKSRITWNSMLSGLTH--LGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVA 431

Query: 479 CLVRGRSLHAYSIK-TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
            L  GR  H Y  K   +   +++ NAL+ MYA+ G +  A +IF  +S +D V++ +++
Sbjct: 432 DLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLI 491

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y + G G  A+ LFEEMKR    PD I+++ VL AC +SGL      LF E++ ++GL
Sbjct: 492 AGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGL 551

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P LEH+ACM DL GR G L++A  +I   P+  +  +W TL+    +  N      A++
Sbjct: 552 SPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAE 611

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +LL++ P+ +G ++L++NMYA  G   + A++RT M D  ++K  GCSW+++ S+   F 
Sbjct: 612 KLLEMRPEHSGYYVLIANMYAAAGSWSKLAEIRTLMRDSGVAKIPGCSWVDVGSEFISFS 671

Query: 718 ASGKDHPESEEIYSKLDLLNDEMK 741
                 P++ E    LD L D MK
Sbjct: 672 VGDTSSPQALESKLLLDSLYDVMK 695



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/536 (22%), Positives = 227/536 (42%), Gaps = 55/536 (10%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  L  G+ +H  ++ SG   D+F  + L+  Y+    L  A  L +   +    +W  L
Sbjct: 92  SSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFRPCSWNIL 151

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  Y+    YE+ +     M     + +  T   IL+AC   ++  FG ++H        
Sbjct: 152 ITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWST 211

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             ++FV  +LISMY   G    A N+F  +  +D    N MI  Y+  G    AF +F  
Sbjct: 212 PWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFES 271

Query: 251 LLSSDFEPNDYTFTNVISVC---------------YENLG-------------------- 275
           + S   E N  T+  +   C                 N G                    
Sbjct: 272 MQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGA 331

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           +  GK++HG  ++       +V NA+VTMY +      A  +F    +++ I+W +++SG
Sbjct: 332 IRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSG 391

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
               G   +A+  F E L  G+  D    A+++  C+  ++L+ G + H +  KH    D
Sbjct: 392 LTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRD 451

Query: 396 -VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
            + L  ALVD+YA+ G +  A+ +    S K    + ++++G+   +  +    + LF +
Sbjct: 452 HLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGY--GMQGEGGKAVRLFEE 509

Query: 455 QRLAGMEPDPVTFSRLLS-------LSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
            +   ++PD +T   +LS       ++ ++      +S+H  S +  + A       +  
Sbjct: 510 MKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYA------CMAD 563

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGKGALLLFEEMKRE 559
           ++ + G ++ A +I   +  R   + W  ++ A  +HG   +G+ A     EM+ E
Sbjct: 564 LFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRPE 619



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 188/452 (41%), Gaps = 38/452 (8%)

Query: 22  PLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVH 81
           P    + I ++  +   + A L     VS   R   F  +P ++K    + +LK G  VH
Sbjct: 145 PCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFT-FPSILKACGETQNLKFGLEVH 203

Query: 82  AFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYE 141
             +    +    F  N LI++Y +   +D A+ LFD ML R A++W S+I  Y   G + 
Sbjct: 204 KSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWR 263

Query: 142 SVLGIACDMYRSEEKFNEHTCSVI-----------------------------------L 166
               +   M     + N  T ++I                                   L
Sbjct: 264 EAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGL 323

Query: 167 EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR 226
            ACS +     G++IH F I+        V  +L++MY      R A  +FR    K   
Sbjct: 324 GACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRI 383

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
             N M+      G  E A  +F  LL    EP+  TF +++ +C     ++ G++ H   
Sbjct: 384 TWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYI 443

Query: 287 VKFGVVRE-ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
            K    R+ + + NA+V MY + G   EA+R+F ++S+++ +++T+LI+GY   G GGKA
Sbjct: 444 TKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKA 503

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNL-ELGLQLHGFAIKHGYLSDVRLGTALVD 404
           +  F E     I  D   +  V+  CS    + +  L        HG    +     + D
Sbjct: 504 VRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMAD 563

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           ++ + G L  A+ ++     + T+   A L G
Sbjct: 564 LFGRVGLLNKAKEIITRMPYRPTSAIWATLIG 595


>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 655

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 183/574 (31%), Positives = 304/574 (52%), Gaps = 14/574 (2%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL---- 233
           G+Q+HA  IK GF   + +   ++S+Y       +A+ +F  L  ++V   N MI     
Sbjct: 79  GKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVG 138

Query: 234 --EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
             + N++    + F  F  +L     P+  TF  +I +C +   +E G QLH   VK G 
Sbjct: 139 RNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGF 198

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF-- 349
             +  VG A+V +Y K G  E A R+F  +S R+L+ W  ++S YV +    +A   F  
Sbjct: 199 DLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNS 258

Query: 350 --LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
             L+ ++      SS L+ + D        + G Q+H   ++  + SDV + +AL+++YA
Sbjct: 259 MRLDVVNGDEFTFSSLLSVISD--DALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYA 316

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           K  ++  AR + D  S +    +N ++ GF      D  +VM L  +    G  PD +T 
Sbjct: 317 KSENIIDARRVFDEMSIRNVVAWNTMIVGFGNH--GDGNEVMKLVKEMLREGFLPDELTI 374

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           S ++S     + +     +HA+++K      + V N+LI+ Y+KCGSI  AF+ F+  S 
Sbjct: 375 SSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQ 434

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
            D+V+W +++ AYA HGL + +  +FE+M   G  PD I+ LGVL AC + GL   G+  
Sbjct: 435 PDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHY 494

Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           F  +   Y + P  EH+ C+VDLLGR G ++EA  ++ S P           +   KL +
Sbjct: 495 FKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHS 554

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           N + + LA+++L  +EP+ + ++ ++SN++A Q    +  ++R TM D R +K  GCSWI
Sbjct: 555 NMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWI 614

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           EI +++H FV++ K HP + E+Y  L++L   MK
Sbjct: 615 EIGNQIHSFVSNDKSHPNALEMYVTLNMLLRPMK 648



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 180/324 (55%), Gaps = 10/324 (3%)

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
           +N + +  +   + EGKQLH   +KFG  + +S+ N I+++Y K   +E+A+++F+ +  
Sbjct: 64  SNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPV 123

Query: 324 RNLISWTALISGYVRSGHGGKA------INGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           RN++SW  +I   V      ++       + F   L   +  D      +I  C+  +++
Sbjct: 124 RNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDI 183

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           E+G+QLH F +K G+  D  +G ALV +YAK G +++AR +    SC+    +N ++S +
Sbjct: 184 EMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCY 243

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR--GRSLHAYSIKTGY 495
           +       E+   +F+  RL  +  D  TFS LLS+ +  A      G+ +H+  ++  +
Sbjct: 244 V--FNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSF 301

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
            +DV+V +ALI MYAK  +I  A ++F  +S R++V+WN M+  +  HG G   + L +E
Sbjct: 302 DSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKE 361

Query: 556 MKREGFAPDDISILGVLQACIYSG 579
           M REGF PD+++I  ++ +C Y+ 
Sbjct: 362 MLREGFLPDELTISSIISSCGYAS 385



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 248/519 (47%), Gaps = 28/519 (5%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +KIS   G L  G+ +HA L+K G        N ++++Y K    + A+KLF+ + VR+ 
Sbjct: 67  LKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNV 126

Query: 125 ITWTSLIKGYL--DDGDYESVLGIACDMYRS---EEKFNEH-TCSVILEACSLLEDRIFG 178
           ++W  +I+  +  +D +  S + +    +R    E    +H T + ++  C+   D   G
Sbjct: 127 VSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMG 186

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+H F +K GF+ + FVG +L+ +Y   G    A  VF  ++ +D+   N M+  Y   
Sbjct: 187 VQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFN 246

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL--GVEEGKQLHGLAVKFGVVREIS 296
              E AF VF  +       +++TF++++SV  ++     + GKQ+H L ++     ++ 
Sbjct: 247 SLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVL 306

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V +A++ MY K     +A R+FD +S RN+++W  +I G+   G G + +    E L  G
Sbjct: 307 VASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREG 366

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
              D   ++++I  C   S +   LQ+H FA+K      + +  +L+  Y+K G + SA 
Sbjct: 367 FLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAF 426

Query: 417 MLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
              +  S      + +++  +    +A+   +   +F +    G++PD + F  L  LSA
Sbjct: 427 KCFELTSQPDLVTWTSLIYAYAFHGLAEKSTE---MFEKMLSYGIKPDRIAF--LGVLSA 481

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNA-----LITMYAKCGSIDGAFQIFKGIS-DRD 529
              C +  + LH + + T   A  IV ++     L+ +  + G I+ AF+I + +  + D
Sbjct: 482 CAHCGLVTKGLHYFKLMTN--AYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVD 539

Query: 530 IVSWNAMLSAYALHG------LGKGALLLFEEMKREGFA 562
             +  A + +  LH       L    L L E  K   +A
Sbjct: 540 SDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYA 578



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 196/420 (46%), Gaps = 11/420 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +     D+++G  +H F +K G   D F    L+ LYAK   ++ A+++F  +  R 
Sbjct: 173 LICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRD 232

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS--LLEDRIFGEQI 181
            + W  ++  Y+ +   E    +   M       +E T S +L   S   LE   FG+Q+
Sbjct: 233 LVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQV 292

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H+  ++  F+++V V ++LI+MY  S    +A  VF  ++ ++V   N MI+ +   G+ 
Sbjct: 293 HSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDG 352

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
                +   +L   F P++ T +++IS C     + E  Q+H  AVK      +SV N++
Sbjct: 353 NEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSL 412

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           ++ Y K G    A + F+  S+ +L++WT+LI  Y   G   K+   F + L  GI  D 
Sbjct: 413 ISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDR 472

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAI---KHGYLSDVRLGTALVDIYAKGGDLKSARML 418
                V+  C+ C  +  G  LH F +    +  + D    T LVD+  + G +  A  +
Sbjct: 473 IAFLGVLSACAHCGLVTKG--LHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEI 530

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP-VTFSRLLSLSASQ 477
           L     +  ++    L  F+          +   + ++L  +EP+  V ++ + ++ ASQ
Sbjct: 531 LRSMPIEVDSD---TLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQ 587



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 18/139 (12%)

Query: 463 DPVTF----SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           DP T     S  L +SA +  L  G+ LHA+ IK G+   + + N ++++Y KC   + A
Sbjct: 55  DPNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDA 114

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGK-------GALLLFEEMKR---EGFAPDDISI 568
            ++F+ +  R++VSWN M+ A     +G+       G  L F   +R   E   PD I+ 
Sbjct: 115 KKLFEELPVRNVVSWNIMIRA----SVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITF 170

Query: 569 LGVLQACIYSGLSEGGICL 587
            G++  C      E G+ L
Sbjct: 171 NGLICLCTQFNDIEMGVQL 189


>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
          Length = 810

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 193/639 (30%), Positives = 331/639 (51%), Gaps = 17/639 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L +G+AVH  +L+   + D F   +L+N+YAK   +  A + F  M VR+ ++WT+ I 
Sbjct: 185 ELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIA 244

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G++ D +  S + +  +M R+    N++T + IL AC+ +       QIH   +K+    
Sbjct: 245 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 304

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  V  +LIS Y + G    +E VF        R +    +    +G S  +    V LL
Sbjct: 305 DCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFI----SGVSNHSLLRSVQLL 360

Query: 253 SSDF----EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
              F     PND  + +V S       +E G QLH  A+K G +  I VG+A+ TMY + 
Sbjct: 361 RRMFHQGLRPNDKCYASVFSSVNS---IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRC 417

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              +++ ++F+ + ER+ +SWTA+++G+   GH  +A   F   +  G   D   L  ++
Sbjct: 418 DNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAIL 477

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+    L  G ++HG  ++  Y     +    + +Y+K   +++AR + D   CK   
Sbjct: 478 SACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQV 536

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +++++SG+      +E   + LF     A +  D    S +LSL A  A     + LH 
Sbjct: 537 MWSSMISGYATNGCGEE--AISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHG 594

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y+IK G  +D  V ++L+ +Y++ G++D + ++F  IS  D+V+W  ++  YA HG  + 
Sbjct: 595 YAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQN 654

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL +F+ M + G  PD + ++ VL AC  +GL E G   FN +   YG+ P L+H+ CMV
Sbjct: 655 ALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMV 714

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGR+GRL+EA   ++S P     ++W TLV+  ++  ++        ++ +    D+G
Sbjct: 715 DLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDTVLGRFVENKIREGN-YDSG 773

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           SF  +SN+ A  G  +E A++R TM    ++KE G S +
Sbjct: 774 SFATLSNILANSGDWEEVARIRKTMKG--VNKEPGWSMV 810



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 243/506 (48%), Gaps = 22/506 (4%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + V+    K G   + +    +++L AK  RL  A ++F      SA+ W + + G + +
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 138 GDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           G+     G+A +M+R       + N  T S  L AC+  E+   G  +H   ++   E +
Sbjct: 149 GEG----GLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYD 204

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VFVGTSL++MY   G    A   F  +  ++V      I  + +  E   A  +   ++ 
Sbjct: 205 VFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVR 264

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +    N YT T+++  C +   V E  Q+HG+ +K  +  +  V  A+++ Y   G  E 
Sbjct: 265 NGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIEL 324

Query: 314 AERMFD---AISERNLISWTALISGYVRSGHG-GKAINGFLEFLDLGICCDSSCLATVID 369
           +E++F+    +S R++  W+A ISG   S H   +++         G+  +  C A+V  
Sbjct: 325 SEKVFEEAGTVSNRSI--WSAFISGV--SNHSLLRSVQLLRRMFHQGLRPNDKCYASVF- 379

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             S  +++E G QLH  AIK G++  + +G+AL  +Y++  +++ +  + +    +    
Sbjct: 380 --SSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVS 437

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A+++GF         +  + F    L G +PD V+ + +LS      CL++G+ +H +
Sbjct: 438 WTAMVAGFATH--GHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGH 495

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           +++  Y     + +  I+MY+KC  +  A +IF     +D V W++M+S YA +G G+ A
Sbjct: 496 TLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEA 554

Query: 550 LLLFEEMKREGFAPDDISILGVLQAC 575
           + LF+ M       D      +L  C
Sbjct: 555 ISLFQLMVAASIRIDSYICSSILSLC 580



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 224/468 (47%), Gaps = 18/468 (3%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           EQ++  A K G   N +V T ++ +   SG  R+A  VF         C N  +    + 
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           GE  +A  +F  ++    EPN +T++  +S C     +  G+ +HGL ++     ++ VG
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            ++V MY K G    A R F  +  RN++SWT  I+G+V+      A+    E +  G+ 
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +     +++  C+  S +    Q+HG  +K     D  +  AL+  Y   G ++ +  +
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 328

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL-----AGMEPDPVTFSRLLSL 473
              F    T    +I S F+  +++      +L S Q L      G+ P+   ++ + S 
Sbjct: 329 ---FEEAGTVSNRSIWSAFISGVSNHS----LLRSVQLLRRMFHQGLRPNDKCYASVFS- 380

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
             S   +  G  LH+ +IK G+   ++VG+AL TMY++C ++  ++++F+ + +RD VSW
Sbjct: 381 --SVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSW 438

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            AM++ +A HG    A L F  M  +GF PD +S+  +L AC  S     G  +     +
Sbjct: 439 TAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLR 498

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +YG    +    C + +  +   +  A  + +++P  +  ++W +++S
Sbjct: 499 VYGETTFIND--CFISMYSKCQGVQTARRIFDATPCKDQ-VMWSSMIS 543



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 152/313 (48%), Gaps = 12/313 (3%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+ +++ N ++ C         +Q++  A K G+     V   +V +  K G   +A R+
Sbjct: 67  PSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSN 376
           F      + + W A +SG VR+G GG A+  F + +  G C  +S   +  +  C+    
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV-WGSCEPNSFTYSGALSACAAGEE 185

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L +G  +HG  ++     DV +GT+LV++YAK GD+ +A         +    +   ++G
Sbjct: 186 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAG 245

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGY 495
           F++   D+    M+L  +    G+  +  T + +L L+ +Q  +VR  S +H   +KT  
Sbjct: 246 FVQD--DEPVSAMLLLREMVRNGVAINKYTATSIL-LACAQMSMVREASQIHGMVLKTEM 302

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFK---GISDRDIVSWNAMLSAYALHGLGKGALLL 552
             D +V  ALI+ Y   G I+ + ++F+    +S+R I  W+A +S  + H L +   LL
Sbjct: 303 YLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLRSVQLL 360

Query: 553 FEEMKREGFAPDD 565
              M  +G  P+D
Sbjct: 361 -RRMFHQGLRPND 372


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 187/621 (30%), Positives = 309/621 (49%), Gaps = 41/621 (6%)

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           L+K     G     L I  DM  +    +  T   +L+ C   +     + +HA  I++ 
Sbjct: 35  LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94

Query: 190 FE-NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           FE  ++ +G  L+S+Y   G   EA  VF  +  K+V     MI  Y +    + A   F
Sbjct: 95  FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +     +PN +TF +++  C +   +E   + H   VK G    + VGN +V MY K 
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTD---LEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKR 211

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  E A  +FD + +R+++SW A+I+GYV++G    A+  F E        D     T++
Sbjct: 212 GCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----DVITWNTMM 267

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            G + C ++E  ++L     +   +S       ++  Y + G +K A  L      +   
Sbjct: 268 AGYAQCGDVENAVELFEKMPEQNLVS----WNTMIAGYVQNGSVKEAFKLFQIMPERNVI 323

Query: 429 EFNAILSGFMEKIADDE-----------------------------EDVMVLFSQQRLAG 459
            +NA++SGF +    +E                             E+ + LF Q ++  
Sbjct: 324 SWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVD 383

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           M+P+  TF+ +L   A+ A L +G   H   I++G+ +DV+VGN L+ MYAKCGSI+ A 
Sbjct: 384 MKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDAR 443

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           ++F  +  +D  S +AM+  YA++G  K +L LFE+M+  G  PD ++ +GVL AC ++G
Sbjct: 444 KVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAG 503

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           L + G   F+ + + Y + P +EH+ CM+DLLGRAG   EA +LIN  P      +W +L
Sbjct: 504 LVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSL 563

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           +S  +   N       ++ L+ L P++   ++L+SN+YA  G  D+   VR  M D ++ 
Sbjct: 564 LSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVK 623

Query: 700 KEAGCSWIEIDSKLHHFVASG 720
           K+ GCSWI I  ++H F+  G
Sbjct: 624 KKLGCSWIVIKKQVHAFLVGG 644



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 242/519 (46%), Gaps = 45/519 (8%)

Query: 61  WPQ------LVKISIGSGDLKLGQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQ 113
           WP       L++  + +  L   + +HA ++++  +  D    N L+++Y K   L  A+
Sbjct: 61  WPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEAR 120

Query: 114 KLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
           ++FD M V++ ++WT++I  Y      +  LG   +M     + N  T + IL AC+ LE
Sbjct: 121 RVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLE 180

Query: 174 DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
             + GE  H   +K GFE+NVFVG  L+ MY   GC   A  +F  +  +DV   N MI 
Sbjct: 181 --VLGE-FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIA 237

Query: 234 EYNKAGESEMAFHVFVHLLSSDF---------------------------EPNDYTFTNV 266
            Y + G  E A  +F  +   D                            E N  ++  +
Sbjct: 238 GYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTM 297

Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           I+   +N  V+E  +L  +  +    R +   NA+++ + ++G  EEA ++F  + E N+
Sbjct: 298 IAGYVQNGSVKEAFKLFQIMPE----RNVISWNAVISGFAQNGQVEEALKLFKTMPECNV 353

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           +SW A+I+GY ++G    A+  F +   + +  ++   A V+  C+  + LE G + H  
Sbjct: 354 VSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEV 413

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
            I+ G+ SDV +G  LV +YAK G ++ AR + D    + +A  +A++ G+   I    +
Sbjct: 414 VIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGY--AINGCSK 471

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG-NAL 505
           + + LF Q +  G++PD VTF  +LS       +  GR       +  +    +     +
Sbjct: 472 ESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCM 531

Query: 506 ITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
           I +  + G  D A  +   +  + D   W ++LSA   H
Sbjct: 532 IDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTH 570


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 192/630 (30%), Positives = 326/630 (51%), Gaps = 9/630 (1%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           A KLFD M   + +T+ SLI GY+   + + V+ +     R   K +++ C+  L ACS 
Sbjct: 20  ADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTACSQ 79

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
             +   G+ IH   +  G  + V +  SLI MY   G    A  +F      D    N +
Sbjct: 80  SGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSL 139

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE--GKQLHGLAVKF 289
           I  Y + G+ E    +   +  +    N YT  + +  C  N    +  G  LH  A+K 
Sbjct: 140 IAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKL 199

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH-----GGK 344
           G+  ++ VG A++ MY K G  ++A ++FD + ++N++ + A+++G ++          K
Sbjct: 200 GLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYK 259

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+N F E    GI       ++++  C +  + +   Q+H    K+G LSD  +G+ L+D
Sbjct: 260 ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILID 319

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y+  G +  A +  +           A++ G+++    + E  + LF +      +PD 
Sbjct: 320 LYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQN--GEFESALSLFYELLTYEEKPDE 377

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
             FS ++S  A+   L  G  +  ++ K G +   I  N+ I MYAK G +  A   F+ 
Sbjct: 378 FIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQ 437

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           + + DIVSW+ M+ + A HG    AL  FE MK  G  P+  + LGVL AC + GL E G
Sbjct: 438 MENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEG 497

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
           +  F+ +E+ Y ++  ++H  C+VDLLGRAGRL++A +LI    F   P++WR L+S  +
Sbjct: 498 LRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACR 557

Query: 645 LMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
           +  ++  +   ++++++LEP  + S++L+ N+Y   G    A+KVRT M + R+ KE G 
Sbjct: 558 IHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGL 617

Query: 705 SWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           SWI+I  K++ FV+  + H  S +IY+KLD
Sbjct: 618 SWIQIGDKVYSFVSGDRSHKNSGQIYAKLD 647



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 234/483 (48%), Gaps = 13/483 (2%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG+L  G+ +H  +L  G  +     N+LI++Y+K  ++D A+ LFD       ++W SL
Sbjct: 80  SGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSL 139

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED--RIFGEQIHAFAIKS 188
           I GY+ +G YE +L I   M+++   FN +T    L+ACS   +  ++FG  +H  AIK 
Sbjct: 140 IAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKL 199

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI--LEYNKAGESEMAF- 245
           G   +V VGT+L+ MY  +G   +A  +F  +  K+V   N M+  L   +  E + A+ 
Sbjct: 200 GLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYK 259

Query: 246 --HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
             ++F  + S   +P+ +T+++++  C      +  KQ+H L  K G++ +  +G+ ++ 
Sbjct: 260 ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILID 319

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           +Y   G   +A   F++I    ++  TA+I GY+++G    A++ F E L      D   
Sbjct: 320 LYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFI 379

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            +T++  C+    L  G Q+ G A K G         + + +YAK GDL +A +      
Sbjct: 380 FSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME 439

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
                 ++ ++    +       + +  F   +  G+EP+   F  +L ++ S   LV  
Sbjct: 440 NPDIVSWSTMICSNAQH--GHAMEALRFFELMKSCGIEPNHFAFLGVL-IACSHRGLVEE 496

Query: 484 RSLHAYSIKTGYAADVIVGN--ALITMYAKCGSI-DGAFQIFKGISDRDIVSWNAMLSAY 540
              +  +++  Y   + V +   ++ +  + G + D    I +   + + V W A+LSA 
Sbjct: 497 GLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSAC 556

Query: 541 ALH 543
            +H
Sbjct: 557 RIH 559



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 191/398 (47%), Gaps = 26/398 (6%)

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           R A+ +F  ++  ++   N +I  Y +    +    +F        + + Y     ++ C
Sbjct: 18  RSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTAC 77

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
            ++  +  GK +HGL + +G+  ++ + N+++ MY K G  + A  +FD   + + +SW 
Sbjct: 78  SQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWN 137

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE----LGLQLHGF 386
           +LI+GYV++G   + +    +    G+  ++  L + +  CS  SN       G  LH  
Sbjct: 138 SLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACS--SNFNGCKMFGTMLHDH 195

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
           AIK G   DV +GTAL+D+YAK G L  A  + D    K    +NA+++G +++   +++
Sbjct: 196 AIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDK 255

Query: 447 ---DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR-----GRSLHAYSIKTGYAAD 498
                + LF + +  G++P   T+S LL     +AC++       + +HA   K G  +D
Sbjct: 256 CAYKALNLFFEMKSCGIKPSMFTYSSLL-----KACIIVEDFKFAKQVHALMCKNGLLSD 310

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
             +G+ LI +Y+  GS+  A   F  I +  IV   AM+  Y  +G  + AL LF E+  
Sbjct: 311 EYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLT 370

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
               PD+     ++ +C   G+   G       EQI G
Sbjct: 371 YEEKPDEFIFSTIMSSCANMGMLRSG-------EQIQG 401



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 146/277 (52%), Gaps = 9/277 (3%)

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G +  A+++FD +S+ N++++ +LISGYV+  +  K +  F +   LG+  D    A 
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
            +  CS   NL  G  +HG  + +G  S V L  +L+D+Y+K G +  AR+L D      
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS--QACLVRGR 484
              +N++++G+++      E+++ +  +    G+  +  T    L   +S    C + G 
Sbjct: 133 GVSWNSLIAGYVQN--GKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGT 190

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH- 543
            LH ++IK G   DV+VG AL+ MYAK GS+D A QIF  + D+++V +NAM++      
Sbjct: 191 MLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQE 250

Query: 544 ----GLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
                    AL LF EMK  G  P   +   +L+ACI
Sbjct: 251 TIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACI 287



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 3/288 (1%)

Query: 50  SCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL 109
           SC  +  +F  +  L+K  I   D K  + VHA + K+G  +D +  + LI+LY+    +
Sbjct: 269 SCGIKPSMFT-YSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSM 327

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
             A   F+ +   + +  T++I GYL +G++ES L +  ++   EEK +E   S I+ +C
Sbjct: 328 MDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSC 387

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVN 229
           + +     GEQI   A K G         S I MY  SG    A   F+ +   D+   +
Sbjct: 388 ANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWS 447

Query: 230 FMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVK 288
            MI    + G +  A   F  + S   EPN + F  V+  C     VEEG +    +   
Sbjct: 448 TMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKD 507

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
           + +   +     +V + G+ G   +AE +   +  E   + W AL+S 
Sbjct: 508 YKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA 555



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 4/132 (3%)

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG    A ++F  +S  +IV++N+++S Y         ++LF++ +R G   D  +  G
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 571 VLQACIYSG-LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
            L AC  SG LS G   + + +  +YGL   +     ++D+  + G++  A  L + S  
Sbjct: 73  ALTACSQSGNLSAGK--MIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDK 130

Query: 630 SESPLLWRTLVS 641
            +  + W +L++
Sbjct: 131 LDG-VSWNSLIA 141


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 184/578 (31%), Positives = 298/578 (51%), Gaps = 39/578 (6%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS--GCFREAE 214
              H    +L  C   ++    +QIH+  IK+G  N  F  + LI     S  G    A 
Sbjct: 30  LQNHPSLTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYAL 86

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
            +F  +   +    N MI   + +     A   +V +L    EPN YTF  ++  C +  
Sbjct: 87  LLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVG 146

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG------------------------- 309
             +EGKQ+HG  +K G+  +  V  +++ MY ++G                         
Sbjct: 147 ATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALIT 206

Query: 310 ------MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
                   ++A R+F+ I  R+ +SW A+I+GY +SG   +A+  F E     +  + S 
Sbjct: 207 GYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNEST 266

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           + TV+  C+   +LELG  +  +   HG  S++RL  AL+D+Y+K GDL  AR L +G  
Sbjct: 267 MVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            K    +N ++ G+     +  ++ + LF + + + +EP+ VTF  +L   A    L  G
Sbjct: 327 EKDIISWNVMIGGYSH--MNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384

Query: 484 RSLHAYSIKTGYA-ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           + +HAY  K      +  +  +LI MYAKCG+I+ A Q+F G+  + + SWNAM+S  A+
Sbjct: 385 KWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAM 444

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG    AL LF +M+ EGF PDDI+ +GVL AC ++GL E G   F+ + + Y + P L+
Sbjct: 445 HGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQ 504

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ CM+DLLGRAG   EA  L+ +        +W +L+   ++  N +    A+K L +L
Sbjct: 505 HYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFEL 564

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
           EP++ G+++L+SN+YA  G  D+ A++RT +ND  + K
Sbjct: 565 EPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/598 (24%), Positives = 261/598 (43%), Gaps = 60/598 (10%)

Query: 57  LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYA--KFNRLDVAQK 114
           L  + P L  +S       L Q +H+ ++K+G  N  F  + LI   A   F  L  A  
Sbjct: 29  LLQNHPSLTLLSTCKSFQNLKQ-IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALL 87

Query: 115 LFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED 174
           LF+ +   +   W ++I+G          +     M     + N +T   +L++C+ +  
Sbjct: 88  LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147

Query: 175 RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS--------------------------- 207
              G+QIH   +K G E++ FV TSLI+MY  +                           
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207

Query: 208 ----GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
               GC  +A  +F  +  +D    N MI  Y ++G  E A   F  +  ++  PN+ T 
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
             V+S C ++  +E G  +       G+   + + NA++ MY K G  ++A  +F+ I E
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           +++ISW  +I GY       +A+  F +     +  +     +++  C+    L+LG  +
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387

Query: 384 HGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           H +  K    L++  L T+L+D+YAK G++++A+ +  G   K    +NA++SG    + 
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGL--AMH 445

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIV 501
                 + LF Q R  G EPD +TF  +LS  +    +  GR   +  ++    +  +  
Sbjct: 446 GHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQH 505

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHG---LGKGALLLFEEMK 557
              +I +  + G  D A  + K +  + D   W ++L A  +HG   LG+ A     E++
Sbjct: 506 YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELE 565

Query: 558 REGFAPDDISILGVLQAC---------IYSGLSEGGI-------CLFNEIEQIYGLRP 599
            E   P    +L  + A          I + L++ G+        + +EI+Q +G RP
Sbjct: 566 PEN--PGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKXQDIYKMLDEIDQSFGERP 621



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 189/429 (44%), Gaps = 36/429 (8%)

Query: 30  NTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGS 89
           N+ S +P   + +   +        +  F   P L+K     G  + G+ +H  +LK G 
Sbjct: 107 NSLSSSPVGAIDFYVRMLLCGVEPNSYTF---PFLLKSCAKVGATQEGKQIHGHVLKLGL 163

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY-----LDD------- 137
           ++D F   +LIN+YA+   L  A+ +F    +R A+++T+LI GY     LDD       
Sbjct: 164 ESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEE 223

Query: 138 -------------------GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
                              G +E  L    +M R+    NE T   +L AC+       G
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             + ++    G  +N+ +  +LI MY   G   +A ++F G+  KD+   N MI  Y+  
Sbjct: 284 NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISV 297
              + A  +F  +  S+ EPND TF +++  C     ++ GK +H  +  KF  +   S+
Sbjct: 344 NSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             +++ MY K G  E A+++F  +  ++L SW A+ISG    GH   A+  F +  D G 
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGF 463

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSAR 416
             D      V+  CS    +ELG Q     ++   +S  ++    ++D+  + G    A 
Sbjct: 464 EPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAE 523

Query: 417 MLLDGFSCK 425
            L+     K
Sbjct: 524 ALMKNMEMK 532


>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 193/656 (29%), Positives = 334/656 (50%), Gaps = 43/656 (6%)

Query: 104 AKFNRLDVAQKLF---DGMLVRSAIT----WTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           A  N L+ AQ+ F   D  ++ S +T    +TS  +G L D  +++V  I      + + 
Sbjct: 41  ASCNALESAQETFTSVDASMIDSLLTSLKEFTS--RGNLLDA-FKTVSLIRLHASSASQD 97

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY------FHSGCF 210
              H  S +L +C+ ++    G Q+H   I  GFE +  +   L++ Y        +   
Sbjct: 98  LIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVI 157

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
            E  N+     +      N +I  Y + G  + A   +  ++     P+++T+ +V+  C
Sbjct: 158 TENSNILHPFPW------NLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKAC 211

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS----ERNL 326
            E L +  GK++H               +   ++Y   GM  EA  +F ++     E N+
Sbjct: 212 GEELDLGFGKEVHE--------------SINASLYASMGMWNEAFELFGSMWAEDIELNI 257

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           I W  +  GY+R+G+   A+    +    G   DS  L   +  CS   + +LG ++H F
Sbjct: 258 IIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSF 317

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
           AI+  +     +  AL+ +Y++  DLK A +L      K    +N+I+SG      D  E
Sbjct: 318 AIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCH--MDRSE 375

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY-SIKTGYAADVIVGNAL 505
           +   L  +  L G+EP+ VT + +L L A  A L  G+  H Y + +  +   +++ NAL
Sbjct: 376 EASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNAL 435

Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
           + MYA+ G +  A ++F  + +RD +++ +M++ Y + G G+ AL LFEEM      PD 
Sbjct: 436 VDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDH 495

Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
           I+++ VL AC +SGL   G  LF ++  +YGL P LEHFACM DL GRAG L++A  +I 
Sbjct: 496 ITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIR 555

Query: 626 SSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDE 685
           + P+  +P +W TL+   ++  N++    A+++LL+++P++ G ++L++NMYA  G  ++
Sbjct: 556 NMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNK 615

Query: 686 AAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            AKVR  M DL + K  GC+W+++ +    F+     +  ++EIY  L+ L   MK
Sbjct: 616 LAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMK 671



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 108/502 (21%), Positives = 216/502 (43%), Gaps = 44/502 (8%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +H  ++  G +        L+  Y+ FN L  A  + +   +     W  LI  Y+ 
Sbjct: 119 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVR 178

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  +  L     M +   + +  T   +L+AC    D  FG+++H  +I +        
Sbjct: 179 NGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHE-SINA-------- 229

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE-----YNKAGESEMAFHVFVHL 251
                S+Y   G + EA  +F  +  +D+  +N +I       Y + G  + A  +   +
Sbjct: 230 -----SLYASMGMWNEAFELFGSMWAEDIE-LNIIIWNTIAGGYLRTGNYKGALELLSQM 283

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHG 309
                  +       +  C      + GK++H  A++  FG V   +V NA++TMY +  
Sbjct: 284 RKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVD--TVKNALITMYSRCK 341

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             + A  +F  +  ++LI+W ++ISG        +A     E L  GI  +   +A+V+ 
Sbjct: 342 DLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLP 401

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            C+  +NL+ G + H +  +     D + L  ALVD+YA+ G +  AR + D    +   
Sbjct: 402 LCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKM 461

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG----- 483
            + ++++G+   +  + +  + LF +     ++PD +T   +LS  +    + +G     
Sbjct: 462 TYTSMIAGY--GMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFE 519

Query: 484 --RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAY 540
             RSL+  +    + A       +  ++ + G ++ A +I + +  +   + W  ++ A 
Sbjct: 520 KMRSLYGLTPHLEHFA------CMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGAC 573

Query: 541 ALHG---LGKGALLLFEEMKRE 559
            +H    +G+ A     EMK E
Sbjct: 574 RIHRNTEIGEWAAEKLLEMKPE 595



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 85/179 (47%), Gaps = 14/179 (7%)

Query: 56  LLFNDWPQLVKIS------IGSGDLKLGQAVHAFLLKSGSQND-TFEANNLINLYAKFNR 108
           LLF   P  V I+          +L+ G+  H ++ +     D     N L+++YA+  +
Sbjct: 385 LLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGK 444

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           +  A+++FD +  R  +T+TS+I GY   G+ ++ L +  +M   + K +  T   +L A
Sbjct: 445 VLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSA 504

Query: 169 CS----LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
           CS    + + ++  E++ +     G   ++     +  ++  +G   +A+ + R + YK
Sbjct: 505 CSHSGLVTQGQLLFEKMRSL---YGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYK 560


>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 730

 Score =  311 bits (797), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 184/600 (30%), Positives = 305/600 (50%), Gaps = 38/600 (6%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+H   I  GFE +  +   L++ Y +     +A  +            N +I  Y +
Sbjct: 112 GKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVR 171

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G    A   +  +      P+ +T+ +V+  C E L +  GK+LH       +   + V
Sbjct: 172 NGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFV 231

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF----LEFL 353
            N++V+MY K G    A  +F+ + ER+ +SW  +ISGY   G   +A   F    +E +
Sbjct: 232 HNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGI 291

Query: 354 DLGICC-----------------------------DSSCLATVI--DGCSVCSNLELGLQ 382
           +L I                               D   +AT+I    CS    ++LG +
Sbjct: 292 ELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGRE 351

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +HG AI+  Y     +  AL+ +Y++   L+ A  L      K    +N++LSG+     
Sbjct: 352 IHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTH--M 409

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI-KTGYAADVIV 501
           D  E+   LF +  L+G+EP+ VT + +L L A  A L  G+  H Y + + G+   +++
Sbjct: 410 DRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLL 469

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            N+L+ MYA+ G +  A ++F  IS RD V++ ++++ Y + G G+ AL LF+EMK+   
Sbjct: 470 WNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHI 529

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            PD ++++ VL AC +SGL   GI LF  +   YG+ P LEHFACMVDL GRAG L +A 
Sbjct: 530 KPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAK 589

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
            +I   P+  S  +W TL+   ++  N++    A+++LL++ P+++G ++L++NMYA  G
Sbjct: 590 EMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAG 649

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
              + AKVRT M DL + K  GC+W+++ S    F+      P   ++Y  L+ L + MK
Sbjct: 650 CWSKLAKVRTYMRDLGVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKLYPLLEGLTELMK 709



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/528 (22%), Positives = 227/528 (42%), Gaps = 45/528 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ +H  ++  G +        L+  Y  F+ L  A  + +   +   + W  LI  
Sbjct: 109 LSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISS 168

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+ +G +   L     M     + ++ T   +L+AC    D  FG+++HA    S    N
Sbjct: 169 YVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWN 228

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FV  SL+SMY  +G    A  +F  +  +D    N MI  Y   G  + AF +F  +  
Sbjct: 229 LFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRV 288

Query: 254 SDFEPNDYTFTNVISVCYENLGVEE----------------------------------- 278
              E N  T+  +   C ++   EE                                   
Sbjct: 289 EGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKL 348

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G+++HG A++       +V NA++TMY +      A  +F +   +N+I+W +++SGY  
Sbjct: 349 GREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTH 408

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VR 397
                +A   F E L  GI  +   +A+++  C+  +NL+ G + H + ++     D + 
Sbjct: 409 MDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLL 468

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           L  +LVD+YA+ G +  A+ L D  S +    + ++++G+   I  +  + + LF + + 
Sbjct: 469 LWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGY--GIQGEGREALKLFDEMKK 526

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSI 515
             ++PD VT   +LS  +    +  G  L    + + Y     + +   ++ ++ + G +
Sbjct: 527 RHIKPDHVTMVAVLSACSHSGLVTEGIKLFEL-MPSAYGIIPRLEHFACMVDLFGRAGLL 585

Query: 516 DGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGKGALLLFEEMKRE 559
             A ++   +  R   + W  +L A  +HG   +G+ A     EM+ E
Sbjct: 586 HKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPE 633



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 209/467 (44%), Gaps = 41/467 (8%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      D+  G+ +HA +  S    + F  N+L+++YAK   L  A+ LF+ ML
Sbjct: 197 YPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENML 256

Query: 121 VRSAITWTSLIKGY-----------------------------------LDDGDYESVLG 145
            R  ++W ++I GY                                   +  G++E  L 
Sbjct: 257 ERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALE 316

Query: 146 IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYF 205
           +   M       +     + L ACS +     G +IH  AI+S ++    V  +LI+MY 
Sbjct: 317 LLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYS 376

Query: 206 HSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
                R A N+F+    K++   N M+  Y     SE A  +F  +L S  EPN  T  +
Sbjct: 377 RCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIAS 436

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVRE-ISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           ++ +C     ++ GK+ H   ++    ++ + + N++V MY + G   EA+R+FD+IS R
Sbjct: 437 ILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRR 496

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           + +++T+LI+GY   G G +A+  F E     I  D   +  V+  CS    +  G++L 
Sbjct: 497 DEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLF 556

Query: 385 GF-AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
                 +G +  +     +VD++ + G L  A+ ++     + ++   A L G      +
Sbjct: 557 ELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGN 616

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLS-LSASQACLVRGRSLHAY 489
            E   +  ++ ++L  M P+   +  L++ + A+  C  +   +  Y
Sbjct: 617 AE---IGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTY 660



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 170/384 (44%), Gaps = 33/384 (8%)

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           + +GKQLH L +  G  +   +   +VT Y    +  +A  + +  +  + + W  LIS 
Sbjct: 109 LSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISS 168

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           YVR+G  G+A++ + +    GI  D     +V+  C    ++  G +LH          +
Sbjct: 169 YVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWN 228

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE---------- 445
           + +  +LV +YAK G+L +AR L +    +    +N ++SG+  K    E          
Sbjct: 229 LFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRV 288

Query: 446 -----------------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
                                  E+ + L S  R  G++ D V     L   +    +  
Sbjct: 289 EGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKL 348

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           GR +H  +I++ Y     V NALITMY++C  +  A+ +F+    ++I++WN+MLS Y  
Sbjct: 349 GREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTH 408

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
               + A  LF EM   G  P+ ++I  +L  C      + G      I +  G +  L 
Sbjct: 409 MDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLL 468

Query: 603 HFACMVDLLGRAGRLSEAMNLINS 626
            +  +VD+  R+G++ EA  L +S
Sbjct: 469 LWNSLVDMYARSGKVLEAKRLFDS 492


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 169/512 (33%), Positives = 282/512 (55%), Gaps = 4/512 (0%)

Query: 230 FMILEYNKAGESEMAFHVFVHLLSSDFEPN-DYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           F +  ++++    +A H    + S   +P   Y +T+++  C ++  +  GKQLH     
Sbjct: 16  FNLFPFSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYH 75

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G+     +   +V +Y        A  +FD I ++NL  W  LI GY  +G    AI  
Sbjct: 76  LGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIIL 135

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           + + LD G+  D+  L  V+  CS  S +  G  +H + IK G+  D+ +G AL+D+YAK
Sbjct: 136 YHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAK 195

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G +  A  + D    +    +N++L+ + +    DE   + L  +    G+ P   T  
Sbjct: 196 CGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDES--ISLCREMAANGVRPTEATLV 253

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            ++S SA  ACL  GR +H +  + G+ ++  V  ALI MYAKCGS+  A  +F+ + ++
Sbjct: 254 TVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREK 313

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
            +VSWNA+++ YA+HGL  GAL LF++M++E   PD I+ +GVL AC    L + G  L+
Sbjct: 314 RVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALY 372

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
           N + + YG+ P ++H+ CM+DLLG  G+L EA +LI +        +W  L++  K+  N
Sbjct: 373 NLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGN 432

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            + + LA ++L++LEP D+G++++++NMYA  G  +   K+R  M D R+ K   CSWIE
Sbjct: 433 VELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIE 492

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           + +K++ F+A    H  S+ IY++L  L   M
Sbjct: 493 VKNKVYAFLAGDVSHSNSDAIYAELKRLEGLM 524



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 216/434 (49%), Gaps = 16/434 (3%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+HA     G   N  + T L+ +Y  S     A N+F  +  +++   N +I  Y  
Sbjct: 66  GKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAW 125

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  + A  ++  +L     P+++T   V+  C     + EG+ +H   +K G  R++ V
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFV 185

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G A++ MY K G   +A R+FD I  R+ + W ++++ Y ++GH  ++I+   E    G+
Sbjct: 186 GAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGV 245

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
               + L TVI   +  + L  G ++HGF  +HG+ S+ ++ TAL+D+YAK G +K A  
Sbjct: 246 RPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALA 305

Query: 418 LLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           L +    K    +NAI++G+ M  +A    D   LF + R     PD +TF  +L+  + 
Sbjct: 306 LFERLREKRVVSWNAIITGYAMHGLAVGALD---LFDKMRKED-RPDHITFVGVLAACSR 361

Query: 477 QACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWN 534
              L  GR+L+   ++  G    V     +I +   CG +D A+ + + +S + D   W 
Sbjct: 362 GRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWG 421

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY--SGLSEGGICLFNEIE 592
           A+L++  +HG  + A L  E++      PDD S   V+ A +Y  SG  EG      ++ 
Sbjct: 422 ALLNSCKIHGNVELAELALEKLIE--LEPDD-SGNYVILANMYAQSGKWEG----VEKLR 474

Query: 593 QIYGLRPILEHFAC 606
           Q+   + I ++ AC
Sbjct: 475 QVMIDKRIKKNIAC 488



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 199/437 (45%), Gaps = 26/437 (5%)

Query: 29  INTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSG 88
           +++F P P +   Y                     L++  I S  L  G+ +HA     G
Sbjct: 37  VDSFPPQPTTHYGY-------------------TSLLQSCIDSKALNPGKQLHAQFYHLG 77

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
              +   A  L++LYA  N L  A+ LFD +  ++   W  LI+GY  +G +++ + +  
Sbjct: 78  IAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYH 137

Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG 208
            M     + +  T   +L+ACS L     G  IH + IKSG+E ++FVG +LI MY   G
Sbjct: 138 KMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCG 197

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
           C  +A  VF  +  +D    N M+  Y + G  + +  +   + ++   P + T   VIS
Sbjct: 198 CVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVIS 257

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
              +   +  G+++HG   + G      V  A++ MY K G  + A  +F+ + E+ ++S
Sbjct: 258 SSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVS 317

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           W A+I+GY   G    A++ F + +      D      V+  CS    L+ G  L+   +
Sbjct: 318 WNAIITGYAMHGLAVGALDLF-DKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMV 376

Query: 389 K-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY-TAEFNAILSGFMEKIADDEE 446
           + +G    V+  T ++D+    G L  A  L+   S K  +  + A+L+    KI  + E
Sbjct: 377 RDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSC--KIHGNVE 434

Query: 447 DVMVLFSQQRLAGMEPD 463
             +   + ++L  +EPD
Sbjct: 435 --LAELALEKLIELEPD 449


>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
 gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 182/546 (33%), Positives = 303/546 (55%), Gaps = 9/546 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE-AENVFRGLAYK 223
           +L+ C  ++    G Q HA  +KSG E + FVG SL+S+YF  G        VF GL  K
Sbjct: 66  LLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVK 125

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV     MI  Y + G+S +A  +F  +L S  EPN +T + VI  C E   +  GK  H
Sbjct: 126 DVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFH 185

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           G+ V+ G      + ++++ MYG++ +S +A ++FD + E + + WT +IS + R+    
Sbjct: 186 GVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYE 245

Query: 344 KAINGF-LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
           +A+  F L+     +C D+    +V+  C     L  G ++H   I +G+  +V   ++L
Sbjct: 246 EALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSL 305

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y K G ++ ++ L D  S + +  ++A+L+ +      D E  + LF + +    E 
Sbjct: 306 VDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHN--GDYEKAVNLFREMK----EV 359

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D  +F  ++   A  A +  G+ +H   I+ G   DVIV +AL+ +YAKCG I+ A+++F
Sbjct: 360 DLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVF 419

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             +  R++++WN+M+  +A +G    A+ +FE M +EG  PD IS +G+L AC ++GL +
Sbjct: 420 DRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVD 479

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV-S 641
                F+ +   YG++P +EH+ CMVDLLGRAG L EA NLI ++       LW  L+ +
Sbjct: 480 QARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGA 539

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
            +    NS  +   +K+L++LEP+   S++ ++N+Y   G  D+A KVR  M + +L K 
Sbjct: 540 CTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKM 599

Query: 702 AGCSWI 707
            G SW+
Sbjct: 600 PGQSWM 605



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 247/487 (50%), Gaps = 18/487 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV-AQKLFDGM 119
           +  L++  I       G+  HA ++KSG + D F  N+L++LY K     +  +++FDG+
Sbjct: 63  YASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGL 122

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            V+  ++W S+I GY+ +G     + +  DM  S  + N  T S +++ACS + + + G+
Sbjct: 123 FVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGK 182

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY--NK 237
             H   ++ GF++N  + +SLI MY  +    +A  +F  L   D  C   +I  +  N 
Sbjct: 183 CFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRND 242

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREIS 296
             E  + F    H  +    P++YTF +V++ C  NLG + +G+++H   + +G    + 
Sbjct: 243 LYEEALGFFYLKH-RAHRLCPDNYTFGSVLTAC-GNLGRLRQGEEIHAKVIAYGFSGNVV 300

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
             +++V MYGK G  E+++R+FD +S RN +SW+AL++ Y  +G   KA+N F E  ++ 
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEV- 359

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
              D     TVI  C+  + +  G ++H   I+ G   DV + +ALVD+YAK G +  A 
Sbjct: 360 ---DLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAY 416

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            + D    +    +N+++ GF +         + +F      G++PD ++F  LL  + S
Sbjct: 417 RVFDRMPTRNLITWNSMIHGFAQN--GSSGIAIQIFEAMIKEGIKPDCISFIGLL-FACS 473

Query: 477 QACLVRGRSLHAYSIKT---GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS- 532
              LV  ++ H + + T   G    V   N ++ +  + G ++ A  + +    R+  S 
Sbjct: 474 HTGLV-DQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSL 532

Query: 533 WNAMLSA 539
           W  +L A
Sbjct: 533 WLVLLGA 539



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 7/181 (3%)

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF--QI 521
           P+ ++ LL          RGR  HA+ +K+G   D  VGN+L+++Y K GS D     ++
Sbjct: 60  PLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGS-DSLLTRRV 118

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           F G+  +D+VSW +M++ Y   G    A+ LF +M   G  P+  ++  V++AC   G  
Sbjct: 119 FDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNL 178

Query: 582 EGGICLFN-EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
             G C     + + +   P++   + ++D+ GR    S+A  L +       P+ W T++
Sbjct: 179 VLGKCFHGVVVRRGFDSNPVI--LSSLIDMYGRNSVSSDARQLFD-ELLEPDPVCWTTVI 235

Query: 641 S 641
           S
Sbjct: 236 S 236


>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
 gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 188/566 (33%), Positives = 304/566 (53%), Gaps = 12/566 (2%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +QIHA  + +      F+ + +I +         A  VF  L   ++   N M+      
Sbjct: 50  KQIHAQMLINSIPKPNFLLSKIIDL----KDLAYASLVFNQLTKPNIYAFNVMLRGLATT 105

Query: 239 GES-EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            +  +    ++  L S   + N++T+  +   C    G+  GK  H L  K G+  +  V
Sbjct: 106 WKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYV 165

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            ++++TMY + G    A ++FD + +R+L+SW ++ISGY + G   +AI  F+E  + G 
Sbjct: 166 NHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGF 225

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   L +V+  C    +L LG  + GF ++     +  +G+AL+D+Y K GDL SAR 
Sbjct: 226 EPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARR 285

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +NAI++G+ +  A +E   +VLF+  R AG  PD VT   +LS  ++ 
Sbjct: 286 VFDSMPNKDVVTWNAIITGYAQNGASNE--AIVLFNGMREAGPHPDRVTMIEVLSACSTI 343

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  G+ +  ++ + G   DV V +ALI MYAKCGS+D A ++F+ +  ++ VSWNAM+
Sbjct: 344 GALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMI 403

Query: 538 SAYALHGLGKGALLLFEEMKREG--FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           SA A HG  + AL LF  M ++     P+DI+ +GVL AC+++GL + G  LF  +   +
Sbjct: 404 SALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSF 463

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           GL P +EH++CMVDL  RAG L EA +LI   P     ++  +L+   +   N+      
Sbjct: 464 GLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERV 523

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
            +  L++E  ++G++++ S +YA     D++AK+R  M    +SK  GCSWI+I + +H 
Sbjct: 524 IQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHE 583

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMK 741
           F A    H  S  IY    LLN+EMK
Sbjct: 584 FHAGDSLHNHSMNIYQ---LLNEEMK 606



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 228/494 (46%), Gaps = 26/494 (5%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINL----YAK--FNRLDVAQ-KLFDGMLVRSAITWTSL 130
           + +HA +L +      F  + +I+L    YA   FN+L       F+ ML   A TW   
Sbjct: 50  KQIHAQMLINSIPKPNFLLSKIIDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKK- 108

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
                    Y+  + +   +     K N  T   +  AC  +   + G+  H    K+G 
Sbjct: 109 ---------YDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGL 159

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + + +V  SLI+MY   G    A  VF  +  +D+   N MI  Y+K G ++ A  +F+ 
Sbjct: 160 DGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFME 219

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +    FEP++ T  +V+  C +   +  G+ + G  ++  +     +G+A++ MYGK G 
Sbjct: 220 MREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGD 279

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              A R+FD++  +++++W A+I+GY ++G   +AI  F    + G   D   +  V+  
Sbjct: 280 LISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSA 339

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           CS    L+LG  +   A + G   DV + +AL+D+YAK G L  A  + +    K    +
Sbjct: 340 CSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSW 399

Query: 431 NAILSGFMEKIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-H 487
           NA++S          ++ + LF +  +    ++P+ +TF  +LS       +  GR L  
Sbjct: 400 NAMISAL--AFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFE 457

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH--- 543
           + ++  G    V   + ++ + A+ G +  A+ + K +  + D +   ++L A       
Sbjct: 458 SMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNA 517

Query: 544 GLGKGALLLFEEMK 557
            +G+  + LF EM+
Sbjct: 518 DVGERVIQLFLEME 531



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 181/387 (46%), Gaps = 5/387 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+  H  + K+G   D +  ++LI +YA+   +  A+K+FD M  R  ++W S+I GY  
Sbjct: 147 GKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSK 206

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G  +  +G+  +M     + +E T   +L AC  L D   G  +  F ++   E N ++
Sbjct: 207 MGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYM 266

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G++LI MY   G    A  VF  +  KDV   N +I  Y + G S  A  +F  +  +  
Sbjct: 267 GSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGP 326

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+  T   V+S C     ++ GK +   A + G+  ++ V +A++ MY K G  ++A R
Sbjct: 327 HPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVR 386

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEF-LDLG-ICCDSSCLATVIDGCSVC 374
           +F+++  +N +SW A+IS     G   +A++ F     D G +  +      V+  C   
Sbjct: 387 VFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHA 446

Query: 375 SNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             ++ G QL     +  G +  V   + +VD+ A+ G L  A  L+     K        
Sbjct: 447 GLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGS 506

Query: 434 LSGFMEKI--ADDEEDVMVLFSQQRLA 458
           L G  ++   AD  E V+ LF +  L+
Sbjct: 507 LLGACQRRRNADVGERVIQLFLEMELS 533



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 162/342 (47%), Gaps = 27/342 (7%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL LG+ V  F+L+   + +++  + LI++Y K   L  A+++FD M  +  +TW ++I
Sbjct: 243 GDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAII 302

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G     + +   M  +    +  T   +L ACS +     G+ +   A + G +
Sbjct: 303 TGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQ 362

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++V+V ++LI MY   G   +A  VF  + +K+    N MI      G+++ A  +F  +
Sbjct: 363 HDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRM 422

Query: 252 LSSD--FEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGKH 308
              +   +PND TF  V+S C     V+EG+QL   + + FG+V ++   + +V +  + 
Sbjct: 423 SKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARA 482

Query: 309 GMSEEAERMFDAISER-NLISWTALISGYVRSGH---GGKAINGFLE------------- 351
           G+  EA  +   +  + + I   +L+    R  +   G + I  FLE             
Sbjct: 483 GLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISS 542

Query: 352 --FLDLGICCDSSCLATVIDGCSV-----CSNLELGLQLHGF 386
             + ++    DS+ +  ++  C V     CS +++G  +H F
Sbjct: 543 KIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEF 584


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/571 (33%), Positives = 305/571 (53%), Gaps = 10/571 (1%)

Query: 178 GEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           G ++H   I +G  +  V +G  L++MY   G   +A  VF  +  KD    N MI   +
Sbjct: 52  GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLD 111

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           + G    A   +  +   +  P  +T  + +S C      + G+Q+HG ++K G+   +S
Sbjct: 112 QNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 171

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG-GKAINGFLEFLDL 355
           V NA++T+Y + G   E  ++F ++ E + +SW ++I     S     +A+  FL  L  
Sbjct: 172 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRA 231

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   +    ++V+   S  S  ELG Q+HG A+K+    +     AL+  Y K G++   
Sbjct: 232 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGC 291

Query: 416 RMLLDGFSCKYT-AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
             +    S +     +N+++SG++      +   +V F  Q   G   D   ++ +LS  
Sbjct: 292 EKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQ--TGQRLDSFMYATVLSAF 349

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           AS A L RG  +HA S++    +DV+VG+AL+ MY+KCG +D A + F  +  R+  SWN
Sbjct: 350 ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWN 409

Query: 535 AMLSAYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           +M+S YA HG G+ AL LF  MK +G   PD ++ +GVL AC ++GL E G   F  +  
Sbjct: 410 SMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 469

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            YGL P +EHF+CM DLLGRAG L +  + I+  P   + L+WRT++      AN + + 
Sbjct: 470 SYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGAC-CRANGRKAE 528

Query: 654 L---ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
           L   A++ L  LEP++A +++L+ NMYA  G  ++  K R  M D  + KEAG SW+ + 
Sbjct: 529 LGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMK 588

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             +H FVA  K HP+++ IY KL  LN +M+
Sbjct: 589 DGVHMFVAGDKSHPDTDVIYKKLKELNRKMR 619



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 247/502 (49%), Gaps = 12/502 (2%)

Query: 45  SISSVSCSERTLLFNDWPQL-VKISIGSGDLKLGQAVHAFLLKSGSQNDTFE-ANNLINL 102
           S+  VS     +L + +P+  +   +G   LK G+ VH  ++ +G  +      N L+N+
Sbjct: 22  SMIDVSPESYVILLSSFPEYSLAEQVG---LKKGREVHGHVITTGLVDFMVGIGNGLVNM 78

Query: 103 YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC 162
           YAK   +  A+++F  M+ + +++W S+I G   +G +   +     M R E      T 
Sbjct: 79  YAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTL 138

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
              L +C+ L+    G+QIH  ++K G + NV V  +L+++Y  +G   E   +F  +  
Sbjct: 139 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 198

Query: 223 KDVRCVNFMILEYNKAGES-EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            D    N +I     +  S   A   F++ L +  + N  TF++V+S        E GKQ
Sbjct: 199 HDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQ 258

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE-RNLISWTALISGYVRSG 340
           +HGLA+K+ +  E +  NA++  YGK G  +  E++F  +SE R+ ++W ++ISGY+ + 
Sbjct: 259 IHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNE 318

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              KA++     L  G   DS   ATV+   +  + LE G+++H  +++    SDV +G+
Sbjct: 319 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 378

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           ALVD+Y+K G L  A    +    + +  +N+++SG+        E+ + LF+  +L G 
Sbjct: 379 ALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARH--GQGEEALKLFANMKLDGQ 436

Query: 461 -EPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
             PD VTF  +LS  +    L  G +   + S   G A  +   + +  +  + G +D  
Sbjct: 437 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKL 496

Query: 519 FQIFKGISDR-DIVSWNAMLSA 539
                 +  + +++ W  +L A
Sbjct: 497 EDFIDKMPVKPNVLIWRTVLGA 518


>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/592 (32%), Positives = 301/592 (50%), Gaps = 48/592 (8%)

Query: 157 FNEHTCSVI--LEACSLLEDRIFGEQIHAFAIKS--GFENNVFVGTSLISMYFHSGCF-- 210
           FN H  S +  L+ C  ++     +QIHA  IK+    +  + + T L ++   S     
Sbjct: 33  FNPHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDP 89

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVFVHLLSSDFEPNDYTFTNVISV 269
           R A ++   L   ++   N +I     +    +    V+  +LS    P++YT   V+  
Sbjct: 90  RYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKA 149

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C E+  V EG+++HG A+K G+  ++ V N ++ MY    +   A ++FD   +R+L+SW
Sbjct: 150 CAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSW 209

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           T +I GYV+ G   + +                       G  +  N  + L        
Sbjct: 210 TTMIQGYVKMGFAREGV-----------------------GLYIIRNSNVNL-------- 238

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
                DV +G ALVD+Y K GD   AR +      K    +N+++SG  +K    +E + 
Sbjct: 239 -----DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQK-GQFKESLY 292

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
           +    QRL G++PD VT   +L+  A+   L  G+ +HAY  +    AD  +GNAL+ MY
Sbjct: 293 MFRKMQRL-GVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMY 351

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           AKCGSID A  +F+ ++ +D+ S+ AM+   A+HG G  AL LF EM + G  PD+++ +
Sbjct: 352 AKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFV 411

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
           GVL AC + GL E G   F ++  IY LRP LEH+ CMVDLLGRAG ++EA   I + P 
Sbjct: 412 GVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPI 471

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
                +   L+   K+    +      K++  +EP+  G+++L+SN+Y+      +A K+
Sbjct: 472 EPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKL 531

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           R TM +  L K  GCS IE+D  +H F    K HP+ +EIY  LD +   +K
Sbjct: 532 RKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 583



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 153/321 (47%), Gaps = 40/321 (12%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K    S  ++ G+ VH   +K G  +D + +N L+ +YA  + +  A+K+FD    
Sbjct: 144 PFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQ 203

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  ++WT++I+GY+  G     +G+                                   
Sbjct: 204 RDLVSWTTMIQGYVKMGFAREGVGL----------------------------------- 228

Query: 182 HAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
             + I++   N +VFVG +L+ MY   G    A  VF+ +  K+V   N MI    + G+
Sbjct: 229 --YIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQ 286

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV-EEGKQLHGLAVKFGVVREISVGN 299
            + + ++F  +     +P+D T   V++ C  NLGV E GK +H    +  +  +  +GN
Sbjct: 287 FKESLYMFRKMQRLGVKPDDVTLVAVLNSC-ANLGVLELGKWVHAYLDRNQIRADGFIGN 345

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+V MY K G  ++A  +F A++ +++ S+TA+I G    G GGKA++ F E   +GI  
Sbjct: 346 ALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEP 405

Query: 360 DSSCLATVIDGCSVCSNLELG 380
           D      V+  CS    +E G
Sbjct: 406 DEVTFVGVLTACSHVGLVEEG 426



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 154/346 (44%), Gaps = 62/346 (17%)

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM- 310
           L  DF P+  +F + +  C    G+   KQ+H       +++ +   +A +T+  +    
Sbjct: 29  LPHDFNPHKLSFLSTLQTCKSIKGL---KQIHA-----SIIKTMPSPDAQLTISTRLSAL 80

Query: 311 --------SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL---EFLDLGICC 359
                      A  +   +   NL  + A+I G   S +   +I G +   + L  GI  
Sbjct: 81  CAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGLATSNN--DSIEGLVVYKQMLSKGIVP 138

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D+  +  V+  C+    +  G ++HG AIK G  SDV +   L+ +YA    ++SAR + 
Sbjct: 139 DNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVF 198

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    +    +  ++ G+++                         + F+R          
Sbjct: 199 DTSPQRDLVSWTTMIQGYVK-------------------------MGFAR---------- 223

Query: 480 LVRGRSLHAYSIK-TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
                 +  Y I+ +    DV VGNAL+ MY KCG  + A ++F+ +  +++VSWN+M+S
Sbjct: 224 ----EGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMIS 279

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
             A  G  K +L +F +M+R G  PDD++++ VL +C   G+ E G
Sbjct: 280 GLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELG 325



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 133/267 (49%), Gaps = 8/267 (2%)

Query: 57  LFNDWPQLVKISIGS---GDLKLG---QAVHAFLLKSGSQN-DTFEANNLINLYAKFNRL 109
           +F+  PQ   +S  +   G +K+G   + V  +++++ + N D F  N L+++Y K    
Sbjct: 197 VFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDA 256

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
           + A+K+F  M V++ ++W S+I G    G ++  L +   M R   K ++ T   +L +C
Sbjct: 257 NFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSC 316

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVN 229
           + L     G+ +HA+  ++    + F+G +L+ MY   G   +A  VF+ +  KDV    
Sbjct: 317 ANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYT 376

Query: 230 FMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVK 288
            MI+     G+   A  +F  +     EP++ TF  V++ C     VEEG++    ++  
Sbjct: 377 AMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTI 436

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAE 315
           + +  ++     +V + G+ G+  EAE
Sbjct: 437 YNLRPQLEHYGCMVDLLGRAGLINEAE 463


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 184/571 (32%), Positives = 307/571 (53%), Gaps = 12/571 (2%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE---- 212
           ++  + + +L  CS L D     +IHA  + +G   N+ + T LI     + C       
Sbjct: 27  YHSRSFNYLLNCCSSLPDL---SRIHALVVTNGCGQNLLLSTKLI---ITACCLAPTMDY 80

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  +F  +  +DV   N +I  Y  AG  E A  ++ ++  +   P++YTF  V+  C  
Sbjct: 81  ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
              + EGK++H   VK G   ++ V +++V MY + G +   E +F  +  RN++SWTA+
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAV 200

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           I+GYV++ +  + +  F E +  G   ++  L +V+  C+    L LG  +HG+ IK G 
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV 260

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
             DV L  AL+ +Y K G++++AR L DG   +    +NA+++ + +  A    + + LF
Sbjct: 261 DPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAG--ANAVKLF 318

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            + +   ++ D +T   ++S  AS   L  GR +H    + G   +V + NALI MYAKC
Sbjct: 319 RRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKC 378

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G+ID A ++F+ +  R +VSW +M+ A A HG G+ AL LF  MK EG  P+  +   V 
Sbjct: 379 GNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVF 438

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC +SGL E G   F  + + Y + P +EH ACMVDLLGRAG L EA   I+  P    
Sbjct: 439 TACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPD 498

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
             +W  L+   ++ +N + + L +++L  L+P+    ++L+SN+YA  G  ++AA++R  
Sbjct: 499 VSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKL 558

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           M +  L K  G S +E++ + H F++  +  
Sbjct: 559 MEERELKKIPGHSLVEVNRRFHTFLSGSRSQ 589



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 229/471 (48%), Gaps = 13/471 (2%)

Query: 80  VHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           +HA ++ +G  QN       +I        +D A+K+FD M  R    W +LI+GY D G
Sbjct: 48  IHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAG 107

Query: 139 DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
             E  L +  +M+ +    + +T   ++ +C++L     G+++H   +K GF+++VFV +
Sbjct: 108 PCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQS 167

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           SL++MY  SG     E VF  +  +++     +I  Y +    +    VF  ++ S  +P
Sbjct: 168 SLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQP 227

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           N  T  +V+  C     +  GK +HG  +K GV  ++S+ NA++ +YGK G  E A  +F
Sbjct: 228 NAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLF 287

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
           D +  +NL+SW A+I+ Y ++  G  A+  F       +  D   + +VI  C+    L 
Sbjct: 288 DGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALN 347

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
            G  +H    + G   +V +  AL+D+YAK G++  AR + +   C+    + +++    
Sbjct: 348 TGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACA 407

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-----LHAYSIKT 493
                  ED + LFS+ +  G++P+  TF+ + +       +  GR      +  YSI  
Sbjct: 408 SH--GHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMP 465

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQ-IFKGISDRDIVSWNAMLSAYALH 543
           G    V     ++ +  + GS+  A++ I K   + D+  W A+L +  +H
Sbjct: 466 G----VEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIH 512



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 199/420 (47%), Gaps = 7/420 (1%)

Query: 57  LFND---WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQ 113
           LF D   +P +V+       L+ G+ VH  ++K G  +D F  ++L+ +Y++       +
Sbjct: 124 LFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGME 183

Query: 114 KLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
            +F  M+VR+ ++WT++I GY+ +  ++  LG+  +M  S  + N  T   +L AC+ LE
Sbjct: 184 LVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLE 243

Query: 174 DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
               G+ IH + IK G + +V +  +LI++Y   G    A ++F G+  +++   N MI 
Sbjct: 244 FLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIA 303

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
            Y +      A  +F  + +   + +  T  +VIS C     +  G+ +H L  + G+  
Sbjct: 304 AYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEI 363

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
            +S+ NA++ MY K G  + A  +F+ +  R+++SWT++I      GHG  A+  F    
Sbjct: 364 NVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMK 423

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
           D G+  +S   A V   C     +E G +        +  +  V     +VD+  + G L
Sbjct: 424 DEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSL 483

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             A   +D    +        L G     ++ E   +V    ++L  ++P  VTF  L+S
Sbjct: 484 MEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELV---AEKLFLLDPQTVTFYVLMS 540


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 206/685 (30%), Positives = 338/685 (49%), Gaps = 81/685 (11%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           LLK G  +D  E N  I+ Y +  R + A ++F  M   S++++  +I GYL +G++E  
Sbjct: 56  LLKCGD-SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFE-- 112

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
             +A  ++    + +  + +V+++    + +R  G+    F I    E +V    +++S 
Sbjct: 113 --LARKLFDEMPERDLVSWNVMIKG--YVRNRNLGKARELFEIMP--ERDVCSWNTMLSG 166

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF--------------- 248
           Y  +GC  +A +VF  +  K+    N ++  Y +  + E A  +F               
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226

Query: 249 -----------VHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREIS 296
                                 D    N I   Y   G ++E +QL   +     V+++ 
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESP----VQDVF 282

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
              A+V+ Y ++ M EEA  +FD + ERN +SW A+++GYV+    G+ +    E  D+ 
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ----GERMEMAKELFDVM 338

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
            C + S   T+I G                                   YA+ G +  A+
Sbjct: 339 PCRNVSTWNTMITG-----------------------------------YAQCGKISEAK 363

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            L D    +    + A+++G+ +  +    + + LF Q    G   +  +FS  LS  A 
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQ--SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L  G+ LH   +K GY     VGNAL+ MY KCGSI+ A  +FK ++ +DIVSWN M
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++ Y+ HG G+ AL  FE MKREG  PDD +++ VL AC ++GL + G   F  + Q YG
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYG 541

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P  +H+ACMVDLLGRAG L +A NL+ + PF     +W TL+  S++  N++ +  A+
Sbjct: 542 VMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 601

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
            ++  +EP+++G ++L+SN+YA  G   +  K+R  M D  + K  G SWIEI +K H F
Sbjct: 602 DKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTF 661

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
               + HPE +EI++ L+ L+  MK
Sbjct: 662 SVGDEFHPEKDEIFAFLEELDLRMK 686



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 122/546 (22%), Positives = 228/546 (41%), Gaps = 78/546 (14%)

Query: 67  ISIGSGDLKLGQAVHAFLLKSGSQNDTFEA------------NNLINLYAKFNRLDVAQK 114
           +  G  D+K      +  +++G  N+                N +I+ Y +    ++A+K
Sbjct: 57  LKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARK 116

Query: 115 LFDGMLVRSAITWTSLIKGYLDD---GDYESVLGI-----ACDMYRSEEKFNEHTC---- 162
           LFD M  R  ++W  +IKGY+ +   G    +  I      C        + ++ C    
Sbjct: 117 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS-----------LISMYFHSGCFR 211
             + +      D  +   + A+   S  E    +  S           L+  +       
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIV 236

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           EA   F  +  +DV   N +I  Y ++G+ + A  +F      D     +T+T ++S   
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYI 292

Query: 272 ENLGVEEGKQLHGL----------AVKFGVV-----------------REISVGNAIVTM 304
           +N  VEE ++L             A+  G V                 R +S  N ++T 
Sbjct: 293 QNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG 352

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y + G   EA+ +FD + +R+ +SW A+I+GY +SGH  +A+  F++    G   + S  
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           ++ +  C+    LELG QLHG  +K GY +   +G AL+ +Y K G ++ A  L    + 
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 472

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    +N +++G+        E  +  F   +  G++PD  T   +LS  +    + +GR
Sbjct: 473 KDIVSWNTMIAGYSRHGFG--EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530

Query: 485 SLHAYSIKTGYAADVIVGNA-----LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
             + Y++   Y    ++ N+     ++ +  + G ++ A  + K +  + D   W  +L 
Sbjct: 531 Q-YFYTMTQDYG---VMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586

Query: 539 AYALHG 544
           A  +HG
Sbjct: 587 ASRVHG 592


>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Brachypodium distachyon]
          Length = 1430

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/611 (31%), Positives = 313/611 (51%), Gaps = 49/611 (8%)

Query: 175  RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI-- 232
            R+F E  H          N F   +L+S +   G   +A  +F  +   D    N +I  
Sbjct: 816  RVFDEIPHP---------NTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAA 866

Query: 233  LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
            L  +  G   + F   +H  + DF  N Y+F + +S C        G Q+H L  K    
Sbjct: 867  LAQHSRGADALLFLAAMH--ADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHA 924

Query: 293  REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            +++ +G+A++ MY K    EEA R+F+A+ ERN++SW +LI+ Y ++G  G+A+  F+  
Sbjct: 925  KDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSM 984

Query: 353  LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG-YLSDVRLGTALVDIYAKGGD 411
            +  G   D   LA+V+  C+  +    G Q+H   +K   +  D+ L  ALVD+YAK G 
Sbjct: 985  MKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGR 1044

Query: 412  LKSARMLLDGFSCKYTAEFNAILSGFME--KIAD-------------------------- 443
             ++AR + D  + +      ++++G+     + D                          
Sbjct: 1045 TRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQN 1104

Query: 444  -DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY------A 496
             +EE+ + LF + +   + P   T+  +L+   + A L  G+  H + +K G+       
Sbjct: 1105 GEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPE 1164

Query: 497  ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            +DV VGN+L+ MY K GSID   ++F+ ++ RD VSWNAM+  +A +G  K AL LFE M
Sbjct: 1165 SDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERM 1224

Query: 557  KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
                 +PD ++++GVL AC +SGL E G   F  + + +G+ P  +H+ CM+DLLGRAG 
Sbjct: 1225 LCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGH 1284

Query: 617  LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
            L E   LI         +LW +L+   +L  N +    A+ +L +L+P+++G ++L+SNM
Sbjct: 1285 LKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNM 1344

Query: 677  YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
            YA  G   +  +VR++M    +SK+ GCSWIEI  K+  F+A    HP   EI++ L ++
Sbjct: 1345 YAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRII 1404

Query: 737  NDEMKLKVKDS 747
              +M     DS
Sbjct: 1405 QMQMSRVSVDS 1415



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 174/622 (27%), Positives = 299/622 (48%), Gaps = 37/622 (5%)

Query: 93  TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
           TF  N  I   A    +  A++LFD M +R   +W ++I      G     L +  +M  
Sbjct: 85  TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
              +  + T + +L  C+   D     Q+H    K  F++NV +GT+L+ +Y +     +
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLAD 204

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A   F  +   +    N ++  Y+ AG  +MA  +F  +LS+   P  YT ++ +  C +
Sbjct: 205 ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRD 264

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE-------------------- 312
           N  +EEG+ +H   ++ G    + V +++V MY K G  +                    
Sbjct: 265 NNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSI 324

Query: 313 -----------EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
                      +A+R+F+ + ERNL+SW A+++GY+RS     A+  F +        D+
Sbjct: 325 VSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDA 384

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL-- 419
             L +V+  C+   ++  G ++H FAIK G+ S   L  ALV +Y+K G L+SA  LL  
Sbjct: 385 ITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLF 444

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +  S + +  +N+++SG+ E+ +  E  +  L   Q  + + P+  TFS  L+  A+   
Sbjct: 445 EMGSERDSYSWNSLISGY-ERHSMSEAALYALTKMQ--SEVTPNQSTFSSALAACANIFL 501

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L +G  +HAY I+ GY  D I+ + LI MY KC   D + +IF+    RD++ WN+M+  
Sbjct: 502 LKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFG 561

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
            A  G G+  L LF+EM+++G   D ++ LG L +CI  G    G   F  +     + P
Sbjct: 562 CAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFT-LMMDESIIP 620

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            +EH+ CM++LLG+ G + E  + +   PF  +  +W  +    +   N K    A+K +
Sbjct: 621 RIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCI 680

Query: 660 LDLEPKDAGSFILVSNMYAGQG 681
            D  P     F+   +  +  G
Sbjct: 681 NDSNPLTPVQFVATVDYESNDG 702



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/530 (23%), Positives = 225/530 (42%), Gaps = 73/530 (13%)

Query: 85   LKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL--------- 135
            LKS    +TF  N L++ YA+  RL  A+++FD +   +  ++ +L+  +          
Sbjct: 787  LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846

Query: 136  ---------DDGDYESVLGIACDMYRSEEK-------------FNEHTCSVILEACSLLE 173
                     D   Y +V+       R  +               N ++ +  L AC+  +
Sbjct: 847  ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906

Query: 174  DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
            D   G Q+HA   KS    +V++G++L+ MY       EA  VF  +  +++   N +I 
Sbjct: 907  DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966

Query: 234  EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
             Y + G    A  +FV ++ + F P++ T  +V+S C       EG+Q+H   VK    R
Sbjct: 967  CYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFR 1026

Query: 294  E-ISVGNAIVTMYGKHGMS-------------------------------EEAERMFDAI 321
            E + + NA+V MY K G +                               E+A+ +F  +
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQM 1086

Query: 322  SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
             E+N+I+W  LI+ Y ++G   +A+  F+      +         V++ C   ++L+LG 
Sbjct: 1087 VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQ 1146

Query: 382  QLHGFAIKHGYL------SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            Q H   +K G+       SDV +G +LVD+Y K G +     + +  + +    +NA++ 
Sbjct: 1147 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 1206

Query: 436  GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTG 494
            G  +      +D + LF +   +   PD VT   +LS       +  GR    + +   G
Sbjct: 1207 GHAQN--GRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHG 1264

Query: 495  YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
                      +I +  + G +    ++ K +S + D V W ++L +  LH
Sbjct: 1265 IIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLH 1314



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 180/403 (44%), Gaps = 39/403 (9%)

Query: 73   DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
            D + G  VHA + KS    D +  + L+++YAK    + A+++F+ M  R+ ++W SLI 
Sbjct: 907  DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966

Query: 133  GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-FE 191
             Y  +G     L +   M ++    +E T + ++ AC+ L     G Q+HA  +KS  F 
Sbjct: 967  CYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFR 1026

Query: 192  NNVFVGTSLISMYFHSGCFR-------------------------------EAENVFRGL 220
             ++ +  +L+ MY   G  R                               +A+ VF  +
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQM 1086

Query: 221  AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
              K+V   N +I  Y + GE E A  +FV L      P  YT+ NV++ C     ++ G+
Sbjct: 1087 VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQ 1146

Query: 281  QLH------GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
            Q H      G    FG   ++ VGN++V MY K G  ++  ++F+ ++ R+ +SW A+I 
Sbjct: 1147 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 1206

Query: 335  GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYL 393
            G+ ++G    A++ F   L      DS  +  V+  C     +E G +        HG +
Sbjct: 1207 GHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGII 1266

Query: 394  SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
                  T ++D+  + G LK    L+   S +  A   A L G
Sbjct: 1267 PSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLG 1309



 Score = 42.7 bits (99), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +K+ + A+  + N L++ YA+ G +  A ++F  I   +  S+NA+LSA+A  G    A 
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846

Query: 551 LLFEEMKREGFAPDDISILGVLQA 574
            LF  +      PD  S   V+ A
Sbjct: 847 ALFHAIPD----PDQCSYNAVIAA 866


>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 184/610 (30%), Positives = 317/610 (51%), Gaps = 6/610 (0%)

Query: 99  LINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE---E 155
           L++ YA    L  A+ +FDG     A ++ +++   +    +   + +  DM R     E
Sbjct: 103 LLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPE 162

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
             ++   S+ L+AC    +  +G  +H  AIK G  +  FV  SL+ MY  +     A  
Sbjct: 163 AQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVGGADG-FVMNSLVDMYAKAEDLECARK 221

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +  ++V     MI    + G +     +F  +   +  P++YT   VI+ C    G
Sbjct: 222 VFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFG 281

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           + +G+ +HG  +K G++    +  A++ MY K G  + A  +FD +S  +L+ WT +I G
Sbjct: 282 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVG 341

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           Y ++G+   A+  FL+     I  +S   ATV+   +   +L LG  +HG A+K G +  
Sbjct: 342 YTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEY 401

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
             +G ALVD+YAK   +  A  +    S K    +N+++SG+ E    D  D ++LF Q 
Sbjct: 402 NVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGD--DALMLFKQM 459

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
            L G  PD ++    LS S     L+ G+S+H Y++K  + +++ V  AL+ +Y KCG +
Sbjct: 460 SLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDL 519

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             A ++F  ++DR+ V+W AM+  Y + G   G++ LF EM ++G  P+DI+   +L  C
Sbjct: 520 LSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTC 579

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            +SG+   G   F+ + Q + + P ++H+ACMVD+L RAG L +A+  I++ P      +
Sbjct: 580 SHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSV 639

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W   +   +L +  +F+  A KR++ L P+    ++L+SN+Y   GM D++  +R  M +
Sbjct: 640 WGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQE 699

Query: 696 LRLSKEAGCS 705
             L K  GCS
Sbjct: 700 KGLVKLPGCS 709



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 241/481 (50%), Gaps = 5/481 (1%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K  I S +   G+++H   +K G   D F  N+L+++YAK   L+ A+K+F+ +  R+ 
Sbjct: 173 LKACIRSAEYSYGRSLHCDAIKVGGA-DGFVMNSLVDMYAKAEDLECARKVFERIPDRNV 231

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           ++WTS+I G + +G     L +   M +     +E+T + ++ ACS L     G  +H  
Sbjct: 232 VSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGS 291

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            IK G  +N F+  +L+ MY   G    A  VF  L+Y D+     MI+ Y + G    A
Sbjct: 292 VIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDA 351

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             +F+    ++  PN  T   V+S   +   +  GK +HGLAVK G+V    VGNA+V M
Sbjct: 352 LRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDM 411

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K     EA+R+F  IS +++++W ++ISGY  +  G  A+  F +    G   D+  +
Sbjct: 412 YAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISV 471

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
              +       +L +G  +HG+A+KH ++S++ + TAL+++Y K GDL SAR + D  + 
Sbjct: 472 VNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMND 531

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG- 483
           + +  + A++ G+   +  D    + LF +    G+ P+ + F+ +LS  +    +  G 
Sbjct: 532 RNSVTWCAMIGGY--GMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGK 589

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
           R   + +        +     ++ + A+ G+++ A +    +    D   W A L    L
Sbjct: 590 RYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCEL 649

Query: 543 H 543
           H
Sbjct: 650 H 650



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 136/301 (45%), Gaps = 15/301 (4%)

Query: 383 LHGFAIKHG---YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           LH   + H     L  +R  T L+  YA  GDL SARM+ DG        + A+L   ++
Sbjct: 81  LHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQ 140

Query: 440 KIADDEEDVMVLFSQQRLAGMEP---DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
              +   D + L    R     P   D    S  L      A    GRSLH  +IK G  
Sbjct: 141 --TERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-G 197

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
           AD  V N+L+ MYAK   ++ A ++F+ I DR++VSW +M+S    +G     LLLF +M
Sbjct: 198 ADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKM 257

Query: 557 KREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           +++   P + +I  V+ AC    GL +G     + I+Q  GL       A ++D+  + G
Sbjct: 258 RQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQ--GLMSNSFISAALLDMYVKCG 315

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS--KFSILASKRLLDLEPKDAGSFILV 673
            L  A  + +   + +  +LW T++       N      +   KR  ++ P    +  ++
Sbjct: 316 ELDHARCVFDELSYIDL-VLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVL 374

Query: 674 S 674
           S
Sbjct: 375 S 375


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 182/585 (31%), Positives = 304/585 (51%), Gaps = 12/585 (2%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM--YFHSGCFREAENVF 217
           H C + LE C+ +      +QIHA  +++    + F  + +++      SG    A  VF
Sbjct: 41  HPCLLSLEKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVF 97

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +        N +I  Y        A   +  ++    +P+ +TF ++   C    GV 
Sbjct: 98  NQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC----GVL 153

Query: 278 -EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
            EGKQLH  + K G   +  + N ++ MY   G    A ++FD +  ++++SW  +I  Y
Sbjct: 154 CEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAY 213

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            +     +AI  F       +  +   L  V+  C+   +LE   Q+H +  + G     
Sbjct: 214 AQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHT 273

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            L +AL+D+Y K G    AR L +    K    +N +++G +E    D E+ + LF++ +
Sbjct: 274 VLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVED--SDYEEALSLFNEMQ 331

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           L+G++ D VT + LL        L  G+ LH Y  K     DV +G AL+ MYAKCGSI+
Sbjct: 332 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 391

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A ++F+ + ++D+++W A++   A+ G G  AL LF EM+     PD I+ +GVL AC 
Sbjct: 392 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 451

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
           ++GL   GI  FN +   YG++P +EH+ CMVD+LGRAGR++EA +LI + P +    + 
Sbjct: 452 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVL 511

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             L+S  ++  N   +  A+++L++L+PK+ G+++L+SN+Y+     + A K+R  M + 
Sbjct: 512 VGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVER 571

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            + K  GCS IE+   +H FV     HP+S EIY  LD +   +K
Sbjct: 572 NIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLK 616



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 176/368 (47%), Gaps = 14/368 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L K     G L  G+ +H    K G  +D +  N L+N+Y+    L  A+K+FD M+
Sbjct: 143 FPSLFK---SCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMV 199

Query: 121 VRSAITWTSLIKGYLD-DGDYESVLGIACDMYRSEE----KFNEHTCSVILEACSLLEDR 175
            +S ++W ++I  Y   D  +E++      ++R  E    K NE T   +L AC+   D 
Sbjct: 200 NKSVVSWATMIGAYAQWDLPHEAI-----KLFRRMEIASVKPNEITLVNVLTACARSRDL 254

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
              +Q+H +  ++G   +  + ++L+ +Y   GC+  A ++F  +  K++ C N MI  +
Sbjct: 255 ETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGH 314

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            +  + E A  +F  +  S  + +  T  +++  C     +E GK LH    K  +  ++
Sbjct: 315 VEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDV 374

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           ++G A+V MY K G  E A R+F  + E+++++WTALI G    G G KA+  F E    
Sbjct: 375 ALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMS 434

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            +  D+     V+  CS    +  G+   +    K+G    +     +VD+  + G +  
Sbjct: 435 EVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAE 494

Query: 415 ARMLLDGF 422
           A  L+   
Sbjct: 495 AEDLIQNM 502


>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71420-like [Glycine max]
          Length = 782

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 186/600 (31%), Positives = 317/600 (52%), Gaps = 27/600 (4%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKS--GFENNVFVGTSLISMYFHSGCFREAENVFR 218
           T + +  AC+  +    G  +H + +      +N+VF+   +I+MY   G    A  VF 
Sbjct: 92  TYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVFD 151

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
            ++++++     +I  + ++G     F +F  LL+  F PN++ F +++S C E+  ++ 
Sbjct: 152 QMSHRNIVSWTALISGHAQSGLVRECFSLFSGLLA-HFRPNEFAFASLLSACEEH-DIKC 209

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHG--------MSEEAERMFDAISERNLISWT 330
           G Q+H +A+K  +   + V N+++TMY K            ++A  MF ++  RNL+SW 
Sbjct: 210 GMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSWN 269

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC-------SNLELGLQL 383
           ++I+ +   G G KAI  F      GI  D + L +V    + C       + L    QL
Sbjct: 270 SMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQL 329

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSA-RMLLDGFSCKYTAEFNAILSGFMEKI 441
           H   IK G +S++ + TAL+  YA  GG +    R+  D  S      + A++S F E+ 
Sbjct: 330 HCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALISVFAER- 388

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
             D E   +LF Q       PD  TFS  L   A         ++H+  IK G+  D ++
Sbjct: 389 --DPEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTVL 446

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            NAL+  YA+CGS+  + Q+F  +   D+VSWN+ML +YA+HG  K AL LF++M     
Sbjct: 447 CNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQM---NV 503

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            PD  + + +L AC + GL + G+ LFN +   +G+ P L+H++CMVDL GRAG++ EA 
Sbjct: 504 CPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAE 563

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
            LI   P     ++W +L+   +    ++ + LA+ +  +LEP ++  ++ +SN+Y+  G
Sbjct: 564 ELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNSLGYVQMSNIYSSGG 623

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
              +A  +R  M+D ++ KE G SW+EI  ++H F + G+ HP    I S+L+++  ++K
Sbjct: 624 SFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHEFGSGGQYHPNRGAILSRLEIVIGQLK 683



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 228/505 (45%), Gaps = 29/505 (5%)

Query: 74  LKLGQAVHAFLLKSGS--QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           L+ G  +H ++L      QND F  N++IN+Y K   L  A+ +FD M  R+ ++WT+LI
Sbjct: 106 LQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTALI 165

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+   G       +   +  +  + NE   + +L AC    D   G Q+HA A+K   +
Sbjct: 166 SGHAQSGLVRECFSLFSGLL-AHFRPNEFAFASLLSACE-EHDIKCGMQVHAVALKISLD 223

Query: 192 NNVFVGTSLISMYFHSGCF--------REAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            NV+V  SLI+MY     F         +A  +F+ + ++++   N MI  +   G  + 
Sbjct: 224 ANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSWNSMIAXFQLRGLGDK 283

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYE-------NLGVEEGKQLHGLAVKFGVVREIS 296
           A  +F H+  +    +  T  +V S   E       N  + +  QLH L +K G++ EI 
Sbjct: 284 AICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIE 343

Query: 297 VGNAIVTMYGK-HGMSEEAERMF-DAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
           V  A++  Y    G   +  R+F D  S+ +++SWTALIS +       +A   F +   
Sbjct: 344 VVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALISVFAERD-PEQAFLLFCQLHR 402

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
                D    +  +  C+     +  + +H   IK G+  D  L  AL+  YA+ G L  
Sbjct: 403 QSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLAL 462

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           +  + +   C     +N++L  +   I    +D + LF Q  +    PD  TF  LLS  
Sbjct: 463 SEQVFNEMGCHDLVSWNSMLKSY--AIHGQAKDALELFQQMNVC---PDSATFVALLSAC 517

Query: 475 ASQACLVRGRSL-HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVS 532
           +    +  G  L ++ S   G    +   + ++ +Y + G I  A ++ + +  + D V 
Sbjct: 518 SHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVI 577

Query: 533 WNAMLSAYALHGLGKGALLLFEEMK 557
           W+++L +   HG  + A L  ++ K
Sbjct: 578 WSSLLGSCRKHGETRLAKLAADKFK 602



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 179/414 (43%), Gaps = 35/414 (8%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL--------DVAQKLFDGMLVRSA 124
           D+K G  VHA  LK     + + AN+LI +Y+K +          D A  +F  M  R+ 
Sbjct: 206 DIKCGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNL 265

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI---LEACSLLE------DR 175
           ++W S+I  +   G  +  + +   MY +   F+  T   +   L  C   +       +
Sbjct: 266 VSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRK 325

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG-----CFREAENVFRGLAYKDVRCVNF 230
            F  Q+H   IKSG  + + V T+LI  Y + G     C+R   +    L   D+     
Sbjct: 326 CF--QLHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQL---DIVSWTA 380

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
           +I  + +  + E AF +F  L    + P+ YTF+  +  C   +  +    +H   +K G
Sbjct: 381 LISVFAER-DPEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKG 439

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
              +  + NA++  Y + G    +E++F+ +   +L+SW +++  Y   G    A+  F 
Sbjct: 440 FQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQ 499

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKG 409
           +   + +C DS+    ++  CS    ++ G++L +  +  HG +  +   + +VD+Y + 
Sbjct: 500 Q---MNVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRA 556

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           G +  A  L+     K  +    I S  +       E  +   +  +   +EP+
Sbjct: 557 GKIFEAEELIRKMPMKPDS---VIWSSLLGSCRKHGETRLAKLAADKFKELEPN 607


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 202/684 (29%), Positives = 343/684 (50%), Gaps = 19/684 (2%)

Query: 72  GDLKLGQAVHAFLLK-SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           GDL  G+  H  + + SG  +D   A  ++ +Y +   +  A++ FD M+VR+ ++W+++
Sbjct: 55  GDLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAM 114

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  Y   G     L +   M     K N  T   +L+AC+ +     G+ IH   +  G 
Sbjct: 115 IAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGL 174

Query: 191 -ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             ++V +G ++++MY   G    A  VF  +  K+    N MI   ++    + AF +  
Sbjct: 175 LGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLG 234

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +      PN  T  +VI  C     +  G+ +H +    G+  + +V NA+V +YGK G
Sbjct: 235 EMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCG 294

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
               A    + I  R+ ISWT L++ Y R GHG +AI         G+  DS     +++
Sbjct: 295 KLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLE 354

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTA 428
            C   + L LG ++H    + G   D  L TALVD+Y K G+  +AR   D  S  +   
Sbjct: 355 SCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVT 414

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +NA+L+ ++  + D  ++ + +F++  L G+ PD VTF  +L   AS A L  GR  H+
Sbjct: 415 VWNALLAAYV--LRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHS 472

Query: 489 YSIKTG------YAADVIVGNALITMYAKCGSI-DGAFQIFKGISDR--DIVSWNAMLSA 539
             ++ G       A+  ++  ++I MYAKCGS+ D   +  K    R  D+V+W+AM++A
Sbjct: 473 RMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAA 532

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y+  GL + AL  F  M++EG  PD +S +  +  C +SGL    +  F  +   +G+ P
Sbjct: 533 YSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAP 592

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
              HFAC+VDLL RAG + EA  L+  +P       W TL+S  +   + + +   + RL
Sbjct: 593 TEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARL 652

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
             L  +   ++ L+++++      D+    R ++ +     + GCSWIEI+++++ F A 
Sbjct: 653 ASL--RSGSAYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFA- 709

Query: 720 GKDH--PESEEIYSKLDLLNDEMK 741
           G D   P  EEI+++L+ L  E++
Sbjct: 710 GDDRLLPREEEIFAELERLCVEIR 733



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 176/358 (49%), Gaps = 11/358 (3%)

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS-SCLATVIDGCSVCSNLEL 379
           +++R+  SW   I+ Y R+GH  +A+  F      G+  D  SC+A ++D  +   +L  
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIA-ILDAFASLGDLSQ 59

Query: 380 GLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
           G   H    +  G  SDV + TA++ +Y + G +  AR   D    +    ++A+++ + 
Sbjct: 60  GEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYA 119

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA- 497
           ++      D + LF +    G++ + +TF  +L   AS   +  G+S+H   +  G    
Sbjct: 120 QR--GHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGD 177

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           DVI+GN ++ MY KCG +D A ++F+ +  ++ V+WN M++A + H   K A  L  EM 
Sbjct: 178 DVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMD 237

Query: 558 REGFAPDDISILGVLQACIY-SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
            +G  P+ I+++ V+ AC +   +  G I   +EI    GL         +V+L G+ G+
Sbjct: 238 LDGLRPNKITLVSVIDACAWMQSIVRGRI--VHEIVAGEGLESDNTVANALVNLYGKCGK 295

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           L  A + +     +   + W TL++      + K +I   KR +D E     SF  V+
Sbjct: 296 LRAARHALEGIE-TRDKISWTTLLAAYARHGHGKRAIAVIKR-MDHEGVKLDSFTFVN 351



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 17/241 (7%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-V 121
            L++  +    L LG+ +H  L +SG + D      L+++Y K    D A++ FD M  V
Sbjct: 351 NLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDV 410

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R    W +L+  Y+     +  LGI   M       +  T   IL+AC+ L     G   
Sbjct: 411 RDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLT 470

Query: 182 HAFAIKSGFENNVFVG------TSLISMYFHSGCFREAENVF---RGLAYKDVRCVNFMI 232
           H+  ++ G  +   V       TS+I+MY   G   +A+  F   R     DV   + M+
Sbjct: 471 HSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMV 530

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-------KQLHGL 285
             Y++ G SE A   F  +     +P+  +F + I+ C  +  V E        +  HG+
Sbjct: 531 AAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGI 590

Query: 286 A 286
           A
Sbjct: 591 A 591


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 171/491 (34%), Positives = 275/491 (56%), Gaps = 9/491 (1%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
              +++ C +   +++GKQ+HG+  K G      VGN+++ MY K GM  EA R+F+ + 
Sbjct: 7   LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLP 66

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
            RN+ISW A+I+GY    +G +A+N F E  + G   D    ++ +  CS       G+Q
Sbjct: 67  VRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQ 126

Query: 383 LHGFAIKHG--YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
           +H   I+HG  YL+   +  ALVD+Y K   +  AR + D    K    ++ ++ G+ ++
Sbjct: 127 IHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQE 186

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA-DV 499
             D+ ++ M LF + R +    D    S ++ + A  A L +G+ +HAY+IK  Y   ++
Sbjct: 187 --DNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEM 244

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            V N+++ MY KCG    A  +F+ + +R++VSW  M++ Y  HG+G  A+ LF EM+  
Sbjct: 245 SVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQEN 304

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
           G  PD ++ L VL AC +SGL + G   F+ +     ++P +EH+ACMVDLLGR GRL E
Sbjct: 305 GIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKE 364

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
           A NLI   P   +  +W+TL+SV ++  + +      + LL  E  +  ++++VSNMYA 
Sbjct: 365 AKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAH 424

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE 739
            G   E+ K+R T+    L KEAG SW+E+D ++H F      HP  EEI+  L     E
Sbjct: 425 AGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVL----KE 480

Query: 740 MKLKVKDSSAF 750
           M+ +VK+   +
Sbjct: 481 MEKRVKEEMGY 491



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 185/370 (50%), Gaps = 32/370 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ VH  + K G        N++I++Y+K   +  A ++F+ + VR+ I+W ++I G
Sbjct: 20  LDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAG 79

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE-- 191
           Y ++ + E  L +  +M    E  + +T S  L+ACS  +    G QIHA  I+ GF   
Sbjct: 80  YTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYL 139

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
               V  +L+ +Y       EA  VF  +  K V   + +IL Y +    + A  +F  L
Sbjct: 140 AQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFREL 199

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHG 309
             S    + +  +++I V  +   +E+GKQ+H   +K  +G++ E+SV N+++ MY K G
Sbjct: 200 RESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLL-EMSVANSVLDMYMKCG 258

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           ++ EA+ +F  + ERN++SWT +I+GY + G G KA+  F E  + GI  DS     V+ 
Sbjct: 259 LTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLS 318

Query: 370 GCS--------------VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            CS              +CSN ++  ++  +A              +VD+  +GG LK A
Sbjct: 319 ACSHSGLIKEGKKYFSILCSNQKIKPKVEHYA-------------CMVDLLGRGGRLKEA 365

Query: 416 RMLLDGFSCK 425
           + L++    K
Sbjct: 366 KNLIEKMPLK 375



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 7/218 (3%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +S  L  +++ CS    L+ G Q+HG   K G+     +G +++D+Y+K G +  A  + 
Sbjct: 3   ESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVF 62

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    +    +NA+++G+  +   + E+ + LF + R  G  PD  T+S  L   +    
Sbjct: 63  NTLPVRNVISWNAMIAGYTNE--RNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADA 120

Query: 480 LVRGRSLHAYSIKTG--YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
              G  +HA  I+ G  Y A   V  AL+ +Y KC  +  A ++F  I ++ ++SW+ ++
Sbjct: 121 AGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLI 180

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDI---SILGVL 572
             YA     K A+ LF E++      D     SI+GV 
Sbjct: 181 LGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVF 218


>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Glycine max]
          Length = 628

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 182/602 (30%), Positives = 320/602 (53%), Gaps = 23/602 (3%)

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
           R    ++  TC   L++C+   +   G+++H   +K+ F  +    TSLI+MY       
Sbjct: 22  RGFSTYDLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLID 81

Query: 212 EAENVFRGLAY--KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
            +  VF    +  K+V   N +I  +      + A  ++  +      P+ +TF  VI  
Sbjct: 82  HSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRA 141

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C ++       ++HGL  K G+  ++ VG+A+V  Y K     EA R+F+ +  R+++ W
Sbjct: 142 CGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLW 201

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            A+++G+ + G   +A+  F      G+      +  V+   SV  + + G  +HGF  K
Sbjct: 202 NAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTK 261

Query: 390 HGYLSDVRLGTALVDIYAKG---GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
            GY S V +  AL+D+Y K    GD  S   ++D         +N+I+S  + +   D  
Sbjct: 262 MGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEID---IFSWNSIMS--VHERCGDHY 316

Query: 447 DVMVLFSQQRLAG---MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA------ 497
             + LF   R+ G   ++PD VT + +L      A L+ GR +H Y +  G A       
Sbjct: 317 GTLRLF--DRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDV 374

Query: 498 --DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
             DV++ NAL+ MYAKCG++  A  +F  + ++D+ SWN M++ Y +HG G  AL +F  
Sbjct: 375 FDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSR 434

Query: 556 MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAG 615
           M +    P++IS +G+L AC ++G+ + G+   +E+E  YG+ P +EH+ C++D+L RAG
Sbjct: 435 MCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAG 494

Query: 616 RLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSN 675
           +L EA +L+ + PF   P+ WR+L++  +L  ++  + +A+ ++++LEP   G+++L+SN
Sbjct: 495 QLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSN 554

Query: 676 MYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
           +Y   G  +E  + R TM    + K  GCSWIE+ + +H F+   + HP++E IY+ L+ 
Sbjct: 555 VYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLNS 614

Query: 736 LN 737
           L 
Sbjct: 615 LT 616



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 226/487 (46%), Gaps = 17/487 (3%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD--GMLVRSAITWT 128
           + +L  G+ +H  LLK+          +LIN+Y+K + +D + ++F+      ++   + 
Sbjct: 42  NANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNKNVFAYN 101

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           +LI G+L +   +  L +   M       ++ T   ++ AC   +D     +IH    K 
Sbjct: 102 ALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKV 161

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G E +VFVG++L++ Y       EA  VF  L  +DV   N M+  + + G  E A  VF
Sbjct: 162 GLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVF 221

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             +  +   P  YT T V+S+       + G+ +HG   K G    + V NA++ MYGK 
Sbjct: 222 RRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKC 281

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-ICCDSSCLATV 367
               +A  +F+ + E ++ SW +++S + R G     +  F   +    +  D   + TV
Sbjct: 282 KCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTV 341

Query: 368 IDGCSVCSNLELGLQLHGFAI--------KHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +  C+  + L  G ++HG+ +         H    DV L  AL+D+YAK G+++ ARM+ 
Sbjct: 342 LPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVF 401

Query: 420 DGFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                K  A +N +++G+ M     +  D+   FS+   A M P+ ++F  LLS  +   
Sbjct: 402 VNMREKDVASWNIMITGYGMHGYGGEALDI---FSRMCQAQMVPNEISFVGLLSACSHAG 458

Query: 479 CLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAM 536
            +  G   L     K G +  +     +I M  + G +  A+ +   +  + D V W ++
Sbjct: 459 MVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSL 518

Query: 537 LSAYALH 543
           L+A  LH
Sbjct: 519 LAACRLH 525


>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 207/711 (29%), Positives = 349/711 (49%), Gaps = 75/711 (10%)

Query: 78  QAVHAFLLKSGSQNDTFE---ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           Q +  F L +  Q++  E    N  I+ YAK ++LDVA++LFD M  R+ ++W ++I  Y
Sbjct: 14  QRLKEFKLYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSY 73

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
              G +   L +   M+RS  K +E T S +L  C+ L     G+ IH   +KSG E+  
Sbjct: 74  SKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFE 133

Query: 195 FVGTSLISMYFHSGCFR--EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            VG++L  +YF++ CF   EA  VF  L  ++    + M++ Y      + A  VFV + 
Sbjct: 134 LVGSAL--LYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMP 191

Query: 253 SSDF---------------------------------EPNDYTFTNVISVCYENLGV-EE 278
             D                                   PN++TF  V+  C   LG+   
Sbjct: 192 RRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRAC-GRLGILSV 250

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G+ +HGL +K G+  + S+G A+V  Y +    ++A R+   +    L +  +LI G + 
Sbjct: 251 GRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLIS 310

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
            G         +E  +L           V +G +  + +   L + G+A+        RL
Sbjct: 311 MGR--------IEDAEL-----------VFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRL 351

Query: 399 -----------GTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFNAILSGFMEKIADDEE 446
                         ++ +Y++ G++  A  L +     K    +N+++SG++      EE
Sbjct: 352 FEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHS-GQPEE 410

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
            + +  +  RL+ ++    TFS L    +    L +G+ LHA+ IKT + ++V VG +LI
Sbjct: 411 ALKLYITMHRLS-IQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLI 469

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MY+KCGSI  A   F  I   ++ +W A+++ +A HGLG  A+ LF+ M  +G AP+  
Sbjct: 470 DMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGA 529

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + +GVL AC  +GL   G+ +F+ +E+ Y + P LEH+AC+VDLLGR+G + EA   I  
Sbjct: 530 TFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKK 589

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            P     ++W  L+S      + +     ++++   +PK   S++++SN+YAG G   E 
Sbjct: 590 MPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREK 649

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
             VR  +   ++ K+ GCSWIE+++K+H F    + HP    IY+ L+ L 
Sbjct: 650 MMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLT 700



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 222/508 (43%), Gaps = 58/508 (11%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG-----------MLV- 121
           L+ G+ +H  +LKSGS++     + L+  YA    +  A+++FD            MLV 
Sbjct: 114 LRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVG 173

Query: 122 -------------------RSAITWTSLIKGYLDDGDYESVLGIACDMYR-----SEEKF 157
                              R  + WT+LI G+  +GD     G A +++R      E   
Sbjct: 174 YVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDG---CGKALEIFRLMMRSGETTP 230

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           NE T   ++ AC  L     G  +H   +K G E +  +G +L+  Y       +A  V 
Sbjct: 231 NEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVC 290

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
           +G+    +  +N +I      G  E A  VF          N  T  N +S      G  
Sbjct: 291 KGVVNPCLNALNSLIEGLISMGRIEDAELVF----------NGMTEMNPVSYNLMIKGYA 340

Query: 278 EGKQLHGLAVKFGVV--REISVGNAIVTMYGKHGMSEEAERMFDAI-SERNLISWTALIS 334
            G Q+      F  +  R I   N ++++Y ++G  ++A  +F+   +E++ ++W ++IS
Sbjct: 341 VGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMIS 400

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           GY+ SG   +A+  ++    L I    S  + +   CS   +L  G  LH   IK  + S
Sbjct: 401 GYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFES 460

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +V +GT+L+D+Y+K G +  A+           A + A+++G        E   + LF +
Sbjct: 461 NVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSE--AISLFDR 518

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKC 512
               G+ P+  TF  +LS + S+A LV       +S++  Y+    + +   ++ +  + 
Sbjct: 519 MIEQGLAPNGATFVGVLS-ACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRS 577

Query: 513 GSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
           G I  A +  K +  + D V W A+LSA
Sbjct: 578 GHIREAEEFIKKMPLEADGVVWGALLSA 605



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 18/350 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L +G+ VH  L+K G + D      L+  Y +   +D A ++  G++        SLI
Sbjct: 246 GILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLI 305

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           +G +  G  E           +E  FN  T    +    +++    G Q+     K  FE
Sbjct: 306 EGLISMGRIED----------AELVFNGMTEMNPVSYNLMIKGYAVGGQMD--DSKRLFE 353

Query: 192 N----NVFVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFH 246
                 +F   ++IS+Y  +G   +A  +F      KD    N MI  Y  +G+ E A  
Sbjct: 354 KMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALK 413

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +++ +     +    TF+ +   C     + +G+ LH   +K      + VG +++ MY 
Sbjct: 414 LYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYS 473

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G   EA+  F +I   N+ +WTALI+G+   G G +AI+ F   ++ G+  + +    
Sbjct: 474 KCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVG 533

Query: 367 VIDGCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           V+  CS    +  G+++ H     +     +     +VD+  + G ++ A
Sbjct: 534 VLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREA 583



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L  GQ +HA L+K+  +++ +   +LI++Y+K   +  AQ  F  +   +   WT+LI
Sbjct: 441 GSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALI 500

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFAI 186
            G+   G     + +   M       N  T   +L ACS   L+ +  +IF      +++
Sbjct: 501 NGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSV 560

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
               E+   V    + +   SG  REAE   + +
Sbjct: 561 TPTLEHYACV----VDLLGRSGHIREAEEFIKKM 590


>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 207/711 (29%), Positives = 349/711 (49%), Gaps = 75/711 (10%)

Query: 78  QAVHAFLLKSGSQNDTFE---ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           Q +  F L +  Q++  E    N  I+ YAK ++LDVA++LFD M  R+ ++W ++I  Y
Sbjct: 54  QRLKEFKLYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSY 113

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
              G +   L +   M+RS  K +E T S +L  C+ L     G+ IH   +KSG E+  
Sbjct: 114 SKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFE 173

Query: 195 FVGTSLISMYFHSGCFR--EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
            VG++L  +YF++ CF   EA  VF  L  ++    + M++ Y      + A  VFV + 
Sbjct: 174 LVGSAL--LYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMP 231

Query: 253 SSDF---------------------------------EPNDYTFTNVISVCYENLGV-EE 278
             D                                   PN++TF  V+  C   LG+   
Sbjct: 232 RRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRAC-GRLGILSV 290

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           G+ +HGL +K G+  + S+G A+V  Y +    ++A R+   +    L +  +LI G + 
Sbjct: 291 GRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLIS 350

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
            G         +E  +L           V +G +  + +   L + G+A+        RL
Sbjct: 351 MGR--------IEDAEL-----------VFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRL 391

Query: 399 -----------GTALVDIYAKGGDLKSARMLLDGFSC-KYTAEFNAILSGFMEKIADDEE 446
                         ++ +Y++ G++  A  L +     K    +N+++SG++      EE
Sbjct: 392 FEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHS-GQPEE 450

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
            + +  +  RL+ ++    TFS L    +    L +G+ LHA+ IKT + ++V VG +LI
Sbjct: 451 ALKLYITMHRLS-IQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLI 509

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MY+KCGSI  A   F  I   ++ +W A+++ +A HGLG  A+ LF+ M  +G AP+  
Sbjct: 510 DMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGA 569

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + +GVL AC  +GL   G+ +F+ +E+ Y + P LEH+AC+VDLLGR+G + EA   I  
Sbjct: 570 TFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKK 629

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            P     ++W  L+S      + +     ++++   +PK   S++++SN+YAG G   E 
Sbjct: 630 MPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREK 689

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
             VR  +   ++ K+ GCSWIE+++K+H F    + HP    IY+ L+ L 
Sbjct: 690 MMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLT 740



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 222/508 (43%), Gaps = 58/508 (11%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG-----------MLV- 121
           L+ G+ +H  +LKSGS++     + L+  YA    +  A+++FD            MLV 
Sbjct: 154 LRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVG 213

Query: 122 -------------------RSAITWTSLIKGYLDDGDYESVLGIACDMYR-----SEEKF 157
                              R  + WT+LI G+  +GD     G A +M+R      E   
Sbjct: 214 YVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDG---CGKALEMFRLMMRSGETTP 270

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           NE T   ++ AC  L     G  +H   +K G E +  +G +L+  Y       +A  V 
Sbjct: 271 NEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVC 330

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
           +G+    +  +N +I      G  E A  VF          N  T  N +S      G  
Sbjct: 331 KGVVNPCLNALNSLIEGLISMGRIEDAELVF----------NGMTEMNPVSYNLMIKGYA 380

Query: 278 EGKQLHGLAVKFGVV--REISVGNAIVTMYGKHGMSEEAERMFDAI-SERNLISWTALIS 334
            G Q+      F  +  R I   N ++++Y ++G  ++A  +F+   +E++ ++W ++IS
Sbjct: 381 VGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMIS 440

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           GY+ SG   +A+  ++    L I    S  + +   CS   +L+ G  LH   IK  + S
Sbjct: 441 GYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFES 500

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +V +GT+L+D+Y+K G +  A+           A + A+++G        E   + LF  
Sbjct: 501 NVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSE--AISLFDX 558

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKC 512
               G+ P+  TF  +LS + S+A LV       +S++  Y+    + +   ++ +  + 
Sbjct: 559 MIEQGLAPNGATFVGVLS-ACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRS 617

Query: 513 GSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
           G I  A +  K +  + D V W A+LSA
Sbjct: 618 GHIREAEEFIKKMPLEADGVVWGALLSA 645



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 153/350 (43%), Gaps = 18/350 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L +G+ VH  L+K G + D      L+  Y +   +D A ++  G++        SLI
Sbjct: 286 GILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLI 345

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           +G +  G  E           +E  FN  T    +    +++    G Q+     K  FE
Sbjct: 346 EGLISMGRIED----------AELVFNGMTEMNPVSYNLMIKGYAVGGQMD--DSKRLFE 393

Query: 192 N----NVFVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFH 246
                 +F   ++IS+Y  +G   +A  +F      KD    N MI  Y  +G+ E A  
Sbjct: 394 KMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALK 453

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           +++ +     +    TF+ +   C     +++G+ LH   +K      + VG +++ MY 
Sbjct: 454 LYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYS 513

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G   EA+  F +I   N+ +WTALI+G+   G G +AI+ F   ++ G+  + +    
Sbjct: 514 KCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVG 573

Query: 367 VIDGCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           V+  CS    +  G+++ H     +     +     +VD+  + G ++ A
Sbjct: 574 VLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREA 623



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 9/154 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ GQ +HA L+K+  +++ +   +LI++Y+K   +  AQ  F  +   +   WT+LI
Sbjct: 481 GSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALI 540

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFAI 186
            G+   G     + +   M       N  T   +L ACS   L+ +  +IF      +++
Sbjct: 541 NGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSV 600

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
               E+   V    + +   SG  REAE   + +
Sbjct: 601 TPTLEHYACV----VDLLGRSGHIREAEEFIKKM 630


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 201/651 (30%), Positives = 323/651 (49%), Gaps = 14/651 (2%)

Query: 91  NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM 150
            D + A++L+ +Y +   L+ A  +F  +  +S + WT LI  Y+  G   + + +   +
Sbjct: 60  RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
            +     +      +L ACS  E    G  IH  A+++G      V ++L+SMY   G  
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179

Query: 211 REAENVFRGLA-YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
           R+A  +F  L  + DV   N MI   ++ G    A  +F  +L     P+  TF +V   
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 270 CYEN--LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
           C  +  L   + K  H    + G+  ++ V  A+V  Y + G  + A   F A+ ERN +
Sbjct: 240 CSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAV 299

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           SWT++I+ + + GH   A+  F   L  G+    S L   ++GC    +L     +   A
Sbjct: 300 SWTSMIAAFAQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCE---DLHTARLVEAIA 355

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI---ADD 444
            + G  +DV + T LV  YA+    + A   +  FS +   E++A L   M  +     D
Sbjct: 356 QEIGVATDVAIVTDLVMAYARCDGQEDA---IRVFSAREEGEWDAALVTAMIAVYAQCRD 412

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA-YSIKTGYAADVIVGN 503
                 L+      G+ PD + +   L   AS A L  GR +HA  +       DV +GN
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
           A+++MY +CGS+  A   F G+  RD +SWNAMLSA A HG  +    LF  M +EGF  
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDA 532

Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL 623
           + ++ L +L AC ++GL E G   F+ +   +G+ P  EH+ CMVDLLGR GRL++A  +
Sbjct: 533 ERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGI 592

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
           + + P       W  L+   ++  +++    A++R+L+L      +++ + N+Y+  G  
Sbjct: 593 VQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRW 652

Query: 684 DEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           ++AA VR  M DL L K  G S IEI SK+H FV   + HP+SE IY++L+
Sbjct: 653 EDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELE 703


>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
          Length = 591

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 189/580 (32%), Positives = 309/580 (53%), Gaps = 24/580 (4%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSG----------FENNVFVG-TSLISMYFHSGCFR 211
           S +L +C    D   G  +HA  +K+           +  +V V   SL+SMY   G   
Sbjct: 15  SGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRRE 74

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY-TFTNVISVC 270
           +A  VF  +  +D    N +I     AG+   A  +F  +L SD    D  TFT V+S C
Sbjct: 75  DAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSEC 131

Query: 271 YEN--LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
                  +     +HGL V  G   E+ VGNA+VT Y + G    AER+F  ++E+N+I+
Sbjct: 132 ARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVIT 191

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           WTA+ISG  R+    ++ + F + +   +  +++  +  +  C+       G Q+HG  +
Sbjct: 192 WTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCALLACARSLAAREGQQVHGLVV 250

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE--FNAILSGFMEKIADDEE 446
           K G+  D+ + + L+D+Y+K G ++ A  +    SC+   E     IL GF +     EE
Sbjct: 251 KAGFEDDLHVESGLMDVYSKCGLMEDALTVFR--SCREPDEVFLTVILVGFAQN--GLEE 306

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
               LF++   AG E D  T S +L    + A    G+ +HA  IK  +  +  V N L+
Sbjct: 307 KAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLV 366

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MY+KCG +  + ++F  +  ++ VSWN++++A+A HG G     LFE MK +G  P D+
Sbjct: 367 NMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDV 426

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + L +L AC + G ++ G+ + N +   YG+ P +EH+AC+VD+LGRAG L +A + I  
Sbjct: 427 TFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIED 486

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            PF+++ LLW+ L+       NS+    A+++LL L+P    +++L+SN+Y+ +G  D+ 
Sbjct: 487 GPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDR 546

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
           AKV   M+++ L K+ G SWIE++ ++H FV     HP S
Sbjct: 547 AKVMKRMSEMGLRKDTGKSWIELEKEVHSFVVRSTSHPNS 586



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 235/489 (48%), Gaps = 22/489 (4%)

Query: 72  GDLKLGQAVHAFLLKSGS-----------QNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           GDL+LG A+HA ++K+ +           ++     N+L+++YA+  R + A ++FD M 
Sbjct: 25  GDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRREDAARVFDEMR 84

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFG- 178
           VR A++W SLI      GD    L +   M RS+ +  +  T + +L  C+         
Sbjct: 85  VRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSECARAGAASLPA 141

Query: 179 -EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
              +H   +  GFE  V VG +L++ YF  G    AE VF G+A K+V     MI    +
Sbjct: 142 CAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMAR 201

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           A   + +F +F  ++ +  + N+ T++  +  C  +L   EG+Q+HGL VK G   ++ V
Sbjct: 202 AELYKESFSLFGQMIRT-VDANNATYSCALLACARSLAAREGQQVHGLVVKAGFEDDLHV 260

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            + ++ +Y K G+ E+A  +F +  E + +  T ++ G+ ++G   KA   F E +  G 
Sbjct: 261 ESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGN 320

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D + ++ V+      +   LG Q+H   IK  +  +  +   LV++Y+K G+L+ +  
Sbjct: 321 EIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVR 380

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K +  +N+I++ F       E  V  LF   +  G +P  VTF  LL   +  
Sbjct: 381 VFDEMPSKNSVSWNSIIAAFARHGHGSE--VYQLFESMKADGAKPTDVTFLSLLHACSHV 438

Query: 478 ACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK-GISDRDIVSWNA 535
               +G   L++ S + G    +     ++ M  + G +D A    + G    + + W A
Sbjct: 439 GSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQA 498

Query: 536 MLSAYALHG 544
           ++ A + HG
Sbjct: 499 LMGACSFHG 507



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 168/354 (47%), Gaps = 6/354 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G+  L     VH  ++  G + +    N L+  Y +      A+++F GM  ++ ITWT+
Sbjct: 135 GAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTA 194

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G      Y+    +   M R+ +  N  T S  L AC+       G+Q+H   +K+G
Sbjct: 195 MISGMARAELYKESFSLFGQMIRTVDA-NNATYSCALLACARSLAAREGQQVHGLVVKAG 253

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           FE+++ V + L+ +Y   G   +A  VFR     D   +  +++ + + G  E AF +F 
Sbjct: 254 FEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFA 313

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGK 307
            ++ +  E ++ T + V+     +     GKQ+H L +K  FGV     V N +V MY K
Sbjct: 314 EMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGV--NTYVCNGLVNMYSK 371

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G   E+ R+FD +  +N +SW ++I+ + R GHG +    F      G         ++
Sbjct: 372 CGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSL 431

Query: 368 IDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           +  CS   + + GL+ L+  + ++G L  +     +VD+  + G L  A+  ++
Sbjct: 432 LHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIE 485



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 137/294 (46%), Gaps = 6/294 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           GQ VH  ++K+G ++D    + L+++Y+K   ++ A  +F        +  T ++ G+  
Sbjct: 242 GQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQ 301

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  E    +  +M  +  + +E+T S +L A         G+QIHA  IK  F  N +V
Sbjct: 302 NGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYV 361

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
              L++MY   G  RE+  VF  +  K+    N +I  + + G     + +F  + +   
Sbjct: 362 CNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGA 421

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
           +P D TF +++  C      ++G + L+ ++ ++GV+  +     +V M G+ G+ ++A+
Sbjct: 422 KPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAK 481

Query: 316 RMF-DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
               D     N + W AL+     S HG   +  +    +  +  D SC A  +
Sbjct: 482 SFIEDGPFTDNALLWQALMGAC--SFHGNSEVGKYAA--EKLLLLDPSCTAAYV 531


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 186/542 (34%), Positives = 301/542 (55%), Gaps = 10/542 (1%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCY 271
           A +VF      DV   N M+  +  +     A   +  +L  S   P+ +TF +++  C 
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
             L  + GK LHG  VK+ +  ++ +   ++ MY   G  + A  +F+ +  RN + WT+
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           +ISGY+++    +A+  + +  + G   D   +AT++  C+   +L +G++LH    +  
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
                 LG+ALV++YAK GDLK+AR + D  S K    ++A++ G+++   +   + + L
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKN--NRSTEALQL 268

Query: 452 FSQQRLAG---MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
           F +  +AG   M P+ VT   ++S  A    L  GR +H Y  +T     V + N+LI M
Sbjct: 269 FRE--VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDM 326

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           ++KCG ID A +IF  +S +D++SWN+M++ +ALHGLG+ AL  F  M+     PD+I+ 
Sbjct: 327 FSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITF 386

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
           +GVL AC ++GL + G  LF EIE +YG+R   EH+ CMVDLL RAG L+EA   I   P
Sbjct: 387 IGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP 446

Query: 629 FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAK 688
                 +W +++   ++  N +    A++ LL LEP + G +IL+SN+YA + M +E  K
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKK 506

Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKD 746
           VR  MN+  + K  GCS + ID+  H F+A    HPE  EI   L  + +++KL   V D
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVAD 566

Query: 747 SS 748
           +S
Sbjct: 567 TS 568



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 179/361 (49%), Gaps = 8/361 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K      + K+G+ +H  ++K    +D +    L+N+YA    L  A+ LF+ M 
Sbjct: 82  FPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMG 141

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ + WTS+I GY+ +      L +   M       +E T + ++ AC+ L+D   G +
Sbjct: 142 HRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMK 201

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H+   +   +    +G++L++MY   G  + A  VF  L+ KDV   + +I  Y K   
Sbjct: 202 LHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNR 261

Query: 241 SEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           S  A  +F  +   S+  PN+ T   VIS C +   +E G+ +H    +      +S+ N
Sbjct: 262 STEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN 321

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +++ M+ K G  + A+R+FD++S ++LISW ++++G+   G G +A+  F       +  
Sbjct: 322 SLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQP 381

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT----ALVDIYAKGGDLKSA 415
           D      V+  CS    ++ G +L  + I+  Y   VRL +     +VD+  + G L  A
Sbjct: 382 DEITFIGVLTACSHAGLVQEGKKLF-YEIEALY--GVRLKSEHYGCMVDLLCRAGLLAEA 438

Query: 416 R 416
           R
Sbjct: 439 R 439



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 203/422 (48%), Gaps = 12/422 (2%)

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +TW S+++ +++       L    +M  RS    +  T   +L+ C+LL +   G+ +H 
Sbjct: 44  LTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHG 103

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K    +++++ T+L++MY   G  + A  +F  + +++      MI  Y K      
Sbjct: 104 QVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNE 163

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYE--NLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           A  ++  +    F P++ T   ++S C E  +LGV  G +LH    +  +     +G+A+
Sbjct: 164 ALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV--GMKLHSHIREMDMKICAVLGSAL 221

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCD 360
           V MY K G  + A ++FD +S++++ +W+ALI GYV++    +A+  F E      +  +
Sbjct: 222 VNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              +  VI  C+   +LE G  +H +  +      V L  +L+D+++K GD+ +A+ + D
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             S K    +N++++GF   +     + +  F   +   ++PD +TF  +L+  +    +
Sbjct: 342 SMSYKDLISWNSMVNGF--ALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLV 399

Query: 481 VRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAML 537
             G+ L  Y I+  Y   +   +   ++ +  + G +  A +  + +    D   W +ML
Sbjct: 400 QEGKKLF-YEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458

Query: 538 SA 539
            A
Sbjct: 459 GA 460


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 190/641 (29%), Positives = 336/641 (52%), Gaps = 11/641 (1%)

Query: 72  GDLKLGQAVHAFLLKSGS--QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G L+  + +HA ++++    +++    N L+N+Y K   ++ A+K+FDG+  R A++WTS
Sbjct: 158 GSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTS 217

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I  Y ++G  +  L +   M     + +  T +  L AC+ L D   G+ IHA  + S 
Sbjct: 218 MISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSN 274

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E++ FVG++LI+MY   G    A   F  +  K V C   ++  Y +      A  ++ 
Sbjct: 275 MESD-FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYG 333

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +       +  T+   +  C     ++EGK +H    + G  + + V  A++TMY K G
Sbjct: 334 RMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGF-QSLVVHTALLTMYAKCG 392

Query: 310 MSEEAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
             + A  +F+ + + RN+  WTA+IS Y ++GH  +A+  + + +  G   +    + V+
Sbjct: 393 ELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVL 452

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS   +LE G+++HG        S+V +  ALV +YAK G L+ A+   +    K   
Sbjct: 453 AACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLV 512

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +NA++  + +     E   + L+      G+ PD VT +  LS  A    L  GR +H+
Sbjct: 513 SWNAMIGAYAQHGLGRE--ALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHS 570

Query: 489 YSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
             +K   + + ++V  AL+ MY +CG ++ A  +F+ +  RD++SW AM SAYA  G   
Sbjct: 571 RVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHAD 630

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
             L L+ EM   G  P++I+   +L  C ++GL   G+  F E++  + + PI EHF CM
Sbjct: 631 QVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCM 690

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VDLLGR+GRL +A  L+ S P+    + W T++   K  +++  +  A++R+ +L+P++ 
Sbjct: 691 VDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENT 750

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
             + L+S+++   G+  EA +V+ +M ++ L K  G S IE
Sbjct: 751 SLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 282/556 (50%), Gaps = 11/556 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-VRSAITWTSL 130
           G L  G+ VH  LL++G   + F  N LI +Y     + +A+  F     +++   +  +
Sbjct: 56  GSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYNQM 115

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG- 189
           +  Y  +G +   L +   M     + ++ T  ++L +CS +       +IHA  I++  
Sbjct: 116 LSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQ 175

Query: 190 -FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
              +N+ +  +L++MY   G   EA  VF G+  +D      MI  Y   G  + A  ++
Sbjct: 176 IIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLY 235

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             + +   +P+  TFT+ +  C +   + +GK +H   V   +  +  VG+A++ MY + 
Sbjct: 236 QQMDADGIQPDSITFTSALLACTK---LVDGKAIHARIVSSNMESDF-VGSALINMYARC 291

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    A + F+ I  ++++ WT+L++ YV++ H  +A++ +      G+  D     T +
Sbjct: 292 GDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTAL 351

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+    L+ G  +H    + G+ S V + TAL+ +YAK G+L +AR + +    K   
Sbjct: 352 GACASLGALKEGKAIHSRVFECGFQSLV-VHTALLTMYAKCGELDAARAVFNRVRQKRNV 410

Query: 429 E-FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             + A++S + +  A   ++ + L+ Q    G  P+  TFS +L+  +S   L  G  +H
Sbjct: 411 YCWTAMISAYAQ--AGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIH 468

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            +   +  A++V V NAL+TMYAKCGS++ A   F+    +D+VSWNAM+ AYA HGLG+
Sbjct: 469 GHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGR 528

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL L++ M  +G  PD+++I   L AC  SG  + G  + + + +    R  L     +
Sbjct: 529 EALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTAL 588

Query: 608 VDLLGRAGRLSEAMNL 623
           V++ GR GRL  A ++
Sbjct: 589 VNMYGRCGRLETARSM 604



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 223/432 (51%), Gaps = 11/432 (2%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA-YK 223
           +L+ C  L     G+ +H   +++G   N F+G  LI MY + G    A   F+  A  K
Sbjct: 48  LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
            V C N M+  Y K G    A  ++  +     EP+  T+  V+  C     + E +++H
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167

Query: 284 GLAVKF-GVVRE-ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
              ++   ++R+ +S+ NA+V MYGK G  EEA ++FD I  R+ +SWT++IS Y  +G 
Sbjct: 168 ASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGF 227

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             +A++ + +    GI  DS    T       C+ L  G  +H   +     SD  +G+A
Sbjct: 228 CDEALDLYQQMDADGIQPDS---ITFTSALLACTKLVDGKAIHARIVSSNMESDF-VGSA 283

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L+++YA+ GD+ SAR   +    K+   + ++++ +++     E   + L+ +    G+ 
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYRE--ALDLYGRMDHEGVH 341

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
            D VT+   L   AS   L  G+++H+   + G+ + ++V  AL+TMYAKCG +D A  +
Sbjct: 342 ADGVTYVTALGACASLGALKEGKAIHSRVFECGFQS-LVVHTALLTMYAKCGELDAARAV 400

Query: 522 FKGI-SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           F  +   R++  W AM+SAYA  G  + AL L+++M  EG  P++ +   VL AC  SG 
Sbjct: 401 FNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGD 460

Query: 581 SEGGICLFNEIE 592
            E G+ +   +E
Sbjct: 461 LEAGMKIHGHVE 472



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 177/369 (47%), Gaps = 15/369 (4%)

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE-RNLISWTALISGY 336
           EGK +H   ++ G  R   +GN ++ MYG  G    A   F   +  + +  +  ++S Y
Sbjct: 60  EGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAY 119

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL--S 394
            ++G   +A+  +    + G   D      V+  CS   +L    ++H   I+   +   
Sbjct: 120 GKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRD 179

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           ++ L  ALV++Y K G ++ AR + DG   +    + +++S +      DE   + L+ Q
Sbjct: 180 NLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDE--ALDLYQQ 237

Query: 455 QRLAGMEPDPVTFSRLLSLSASQAC--LVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
               G++PD +TF+     SA  AC  LV G+++HA  + +   +D  VG+ALI MYA+C
Sbjct: 238 MDADGIQPDSITFT-----SALLACTKLVDGKAIHARIVSSNMESD-FVGSALINMYARC 291

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G +  A Q F+ I ++ +V W ++++AY      + AL L+  M  EG   D ++ +  L
Sbjct: 292 GDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTAL 351

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC   G  + G  + + + +  G + ++ H A ++ +  + G L  A  + N      +
Sbjct: 352 GACASLGALKEGKAIHSRVFEC-GFQSLVVHTA-LLTMYAKCGELDAARAVFNRVRQKRN 409

Query: 633 PLLWRTLVS 641
              W  ++S
Sbjct: 410 VYCWTAMIS 418



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 1/201 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SGDL+ G  +H  +  S   ++    N L+ +YAK   L++A+  F+    +  ++W ++
Sbjct: 458 SGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAM 517

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-G 189
           I  Y   G     L +   M       +E T +  L AC++      G +IH+  +K+  
Sbjct: 518 IGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQS 577

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F +++ V T+L++MY   G    A ++F  +  +DV     M   Y + G ++    +++
Sbjct: 578 FRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYL 637

Query: 250 HLLSSDFEPNDYTFTNVISVC 270
            ++     PN+ TFT+++  C
Sbjct: 638 EMVLHGIRPNEITFTSILVGC 658



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 7/179 (3%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID---GAFQIFK 523
           +  LL        L  G+ +H + ++TG+  +  +GN LI MY  CG I     AFQ F 
Sbjct: 45  YDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFA 104

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG-LSE 582
            I  + +  +N MLSAY  +GL   AL L+  M  EG  PD I+   VL +C   G L E
Sbjct: 105 SI--KAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLRE 162

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
                 + IE    +R  L     +V++ G+ G + EA  + +    +   + W +++S
Sbjct: 163 AREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIK-NRDAVSWTSMIS 220


>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 179/547 (32%), Positives = 291/547 (53%), Gaps = 36/547 (6%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N +I  Y   G  + +  +++ +L S  +P+++TF  V+  C     V EG+Q+H   ++
Sbjct: 62  NSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLR 121

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA--- 345
            G   ++ V N+++ MY K    + A   +D +  R+ +SW ++ISGYV+ G   KA   
Sbjct: 122 LGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDL 181

Query: 346 ----------------ING------FLEFLDL---------GICCDSSCLATVIDGCSVC 374
                           ING      F+E L L          +  +++ +  ++  CS  
Sbjct: 182 FEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTL 241

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
            N E+G  L  F   +    +  L TAL+D+Y+K GD++ A  + DG SCK    +NAI+
Sbjct: 242 CNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAII 301

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G ++      E+ + L+   +   ++P+ +T   +LS  A    L  GR +H Y  + G
Sbjct: 302 TGCVQ--GGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNG 359

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
              +VI+  AL+ MYAKCG ID A  IF   S++D+  WNAM+   A HG G+ +L +F 
Sbjct: 360 LDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFS 419

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           +M R G  P+D++ +GVL AC +SGL E G   F+ +   +GL P LEH+ACMVDLLGRA
Sbjct: 420 QMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRA 479

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G L EA  L+ +       ++W  L+S  ++  N + +   S+ ++  +  + G  IL+S
Sbjct: 480 GHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLS 539

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           N+YA  G   + A+VR  + + R+ K +GCSW+E+D  +H FV     H +S EIY   +
Sbjct: 540 NIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYE 599

Query: 735 LLNDEMK 741
           +L + +K
Sbjct: 600 ILVNHLK 606



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 230/504 (45%), Gaps = 46/504 (9%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
             +HA  L  G    T     LI+L++    +D A+ + D     +  +W SLI+ Y   
Sbjct: 16  HQIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIRAYTVH 71

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G  ++ L +   M RS  K +  T   +L+ACS L   + GEQIH   ++ GF +++FV 
Sbjct: 72  GSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVC 131

Query: 198 TSLISMYFHSGCFR--EAENVFRGLAYKD------------------------------- 224
            SLI MY    CFR   A N +  + ++D                               
Sbjct: 132 NSLIDMY--CKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRR 189

Query: 225 -VRCVNFMILEYNKAGESEMAFHVFVHLLSS--DFEPNDYTFTNVISVCYENLGVEEGKQ 281
            V C   MI  Y K G+      +F  +L S  + +PN  T   ++S C      E G+ 
Sbjct: 190 NVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRF 249

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           L        +     +  A++ MY K G  E+A R+FD +S +NL SW A+I+G V+ G 
Sbjct: 250 LSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGL 309

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             +AI+ +       +  +   L  V+  C+    LELG ++H +  ++G   +V L TA
Sbjct: 310 LEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATA 369

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           LVD+YAK G +  A ++    S K  A +NA++ G       D  D + +FSQ   AG++
Sbjct: 370 LVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYH--GDGRDSLAVFSQMVRAGVQ 427

Query: 462 PDPVTFSRLLSLSASQACLVRGR-SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           P+ VTF  +LS       +  GR    + + K G +  +     ++ +  + G +  A++
Sbjct: 428 PNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYE 487

Query: 521 IFKG-ISDRDIVSWNAMLSAYALH 543
           + +  +   D + W A+LSA  +H
Sbjct: 488 LVQNMLIPPDSIIWGALLSACRIH 511



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 178/393 (45%), Gaps = 35/393 (8%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-- 119
           P ++K     G +  G+ +H  +L+ G  +D F  N+LI++Y K  RLD A+  +D M  
Sbjct: 97  PFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGF 156

Query: 120 ------------------------------LVRSAITWTSLIKGYLDDGDYESVLGIACD 149
                                         + R+ + WT++I GY  +GD+  +L +   
Sbjct: 157 RDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQ 216

Query: 150 MYRS--EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
           M  S  E + N  T   +L ACS L +   G  +  F   +    N  + T+LI MY   
Sbjct: 217 MLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKC 276

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
           G   +A  +F G++ K++   N +I    + G  E A  ++ H+ +   +PN+ T  NV+
Sbjct: 277 GDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVL 336

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
           S C     +E G+++H    + G+   + +  A+V MY K G  ++A  +F   SE+++ 
Sbjct: 337 SACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVA 396

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG-LQLHGF 386
            W A+I G    G G  ++  F + +  G+  +      V+  C+    +E G +Q    
Sbjct: 397 LWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSM 456

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           A KHG    +     +VD+  + G LK A  L+
Sbjct: 457 ADKHGLSPKLEHYACMVDLLGRAGHLKEAYELV 489



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 2/265 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           + ++G+ +  F+  +    +T     LI++Y+K   ++ A ++FDG+  ++  +W ++I 
Sbjct: 243 NYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIIT 302

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G +  G  E  + +   M     K NE T   +L AC+ L     G ++H +  ++G + 
Sbjct: 303 GCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDL 362

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NV + T+L+ MY   G   +A  +F   + KDV   N MIL     G+   +  VF  ++
Sbjct: 363 NVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMV 422

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            +  +PND TF  V+S C  +  VEEG+ Q   +A K G+  ++     +V + G+ G  
Sbjct: 423 RAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHL 482

Query: 312 EEA-ERMFDAISERNLISWTALISG 335
           +EA E + + +   + I W AL+S 
Sbjct: 483 KEAYELVQNMLIPPDSIIWGALLSA 507



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 7/155 (4%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G G L+LG+ VH +L ++G   +   A  L+++YAK  ++D A  +F     +    W +
Sbjct: 341 GLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNA 400

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS----LLEDRIFGEQIHAFA 185
           +I G    GD    L +   M R+  + N+ T   +L AC+    + E R+   Q  + A
Sbjct: 401 MILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRV---QFSSMA 457

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
            K G    +     ++ +   +G  +EA  + + +
Sbjct: 458 DKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNM 492



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 14/176 (7%)

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           LLSL  +   L +   +HA ++  G      +   LI ++    SID A  +        
Sbjct: 2   LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLH----SIDYARFVLDQTPSPT 57

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
             SWN+++ AY +HG  + +L L+ +M R    P + +   VL+AC     S  G  L  
Sbjct: 58  DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKAC-----STLGSVLEG 112

Query: 590 EIEQIYGLRPIL--EHFAC--MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           E    + LR     + F C  ++D+  +  RL  A N  +   F +  + W +++S
Sbjct: 113 EQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDE-VSWNSIIS 167


>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
          Length = 674

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 184/568 (32%), Positives = 293/568 (51%), Gaps = 6/568 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---LE 234
           G+Q+HA  IK G  N + +   ++ +Y     F +   +F  +  K+V   N +I   +E
Sbjct: 92  GKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVE 151

Query: 235 YN-KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
            N K     + FH F  ++     PN  T   ++    E   V   +QLH   +K G   
Sbjct: 152 GNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDS 211

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
              VG+A+V  Y K G+ +EA+  FD +S R+L+ W  ++S Y  +G  GKA   F    
Sbjct: 212 NCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMR 271

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
             G+  D     ++I+ C V  +  LG Q+HG  I+  +  DV + +ALVD+Y+K  +++
Sbjct: 272 LEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIE 331

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            AR   DG   K    +  +  G+ +    D ++ M L  +       PD +  + +LS 
Sbjct: 332 DARKAFDGMJVKNIVSWTTMXVGYGQH--GDGKEXMRLLQEMIRVYTYPDELALASILSS 389

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
             + +       +HAY ++ G+ A + + NAL++ Y+KCGSI  AFQ F  +++ DI+SW
Sbjct: 390 CGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISW 449

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            +++ AYA HGL K  + +FE++      PD ++ LGVL AC + G    G+  FN +  
Sbjct: 450 TSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMIN 509

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
           +Y + P  EH+  ++DLLGRAG L EA+NL+ S P           +   K+  N   + 
Sbjct: 510 VYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFLGACKVYRNVGLAR 569

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
            AS++L  +EP + G + L+SNMYA  G   + A+VR  M +    K  GCSW+E   ++
Sbjct: 570 WASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMETAGEV 629

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK 741
           H FV+  K HP + ++Y  LDLL   MK
Sbjct: 630 HTFVSRDKTHPRAVQVYGMLDLLVRLMK 657



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 213/432 (49%), Gaps = 10/432 (2%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +KIS   G L  G+ +HA ++K G  N     N ++++Y K    +   K+FD M +++ 
Sbjct: 80  LKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNV 139

Query: 125 ITWTSLIKGYLDDGDYESV--LGIAC--DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           ++W +LI G ++     ++  LG  C   M       N  T + +L A   L D     Q
Sbjct: 140 VSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQ 199

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H F +KSGF++N FVG++L+  Y   G   EA++ F  ++ +D+   N M+  Y   G 
Sbjct: 200 LHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGV 259

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              AF VF  +     + + +TFT++I+ C        GKQ+HGL ++     ++ V +A
Sbjct: 260 QGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASA 319

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V MY K+   E+A + FD +  +N++SWT +  GY + G G + +    E + +    D
Sbjct: 320 LVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPD 379

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              LA+++  C   S     +Q+H + +++G+ + + +  ALV  Y+K G + SA     
Sbjct: 380 ELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFS 439

Query: 421 GFSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
             +      + +++  +    ++    DV   F +   + + PD V F  +LS  A    
Sbjct: 440 SVAEPDIISWTSLMGAYAFHGLSKQGVDV---FEKILSSNVRPDKVAFLGVLSACAHGGF 496

Query: 480 LVRGRSLHAYSI 491
           ++ G  LH +++
Sbjct: 497 VLEG--LHYFNL 506



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 192/415 (46%), Gaps = 5/415 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L++ SI   D+ + + +H F+LKSG  ++ F  + L++ YAKF  +D AQ  FD +  R 
Sbjct: 184 LLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRD 243

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            + W  ++  Y  +G      G+   M     K +  T + ++ +C +L     G+Q+H 
Sbjct: 244 LVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHG 303

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             I+  F+ +V V ++L+ MY  +    +A   F G+  K++     M + Y + G+ + 
Sbjct: 304 LIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKE 363

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
              +   ++     P++    +++S C       E  Q+H   V+ G    +S+ NA+V+
Sbjct: 364 XMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVS 423

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y K G    A + F +++E ++ISWT+L+  Y   G   + ++ F + L   +  D   
Sbjct: 424 AYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVA 483

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
              V+  C+    +  GL      I  +  + D    T+++D+  + G L  A  LL   
Sbjct: 484 FLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSM 543

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP-DPVTFSRLLSLSAS 476
             +  ++    L  F+          +  ++ ++L  MEP +P  +S + ++ AS
Sbjct: 544 PVEPRSD---TLGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYAS 595



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 8/124 (6%)

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           S  L +SA    L  G+ LHA+ IK G    + + N ++ +Y KC   +   ++F  +  
Sbjct: 77  SHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136

Query: 528 RDIVSWNAMLSAYALHGLGKGALL-----LFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           +++VSWN ++    + G  K AL+      F +M  E  AP+ I++ G+L+A I   L++
Sbjct: 137 KNVVSWNTLICG-VVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIE--LND 193

Query: 583 GGIC 586
            GIC
Sbjct: 194 VGIC 197


>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 765

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 180/574 (31%), Positives = 309/574 (53%), Gaps = 17/574 (2%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           LE CS    +I    IH   +K+G   + F+ + L+++Y   G    A+ VF  +  ++ 
Sbjct: 84  LENCSFSSTQI----IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNA 139

Query: 226 RCVNFMILEYNKAGESEMAFHVFVH-LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
                ++  Y +    + A H+F   LL S+  P++YT    ++ C     ++ G+QLH 
Sbjct: 140 VAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHA 199

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMS-EEAERMFDAISERNLISWTALISGYVRSGHGG 343
             +K+ V  + S+GNA+ ++Y K G   E     F  I E+++ISWTA IS     G   
Sbjct: 200 YIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAM 259

Query: 344 KAINGFLEFL--DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
           K +  F+E L  ++ +  +   L + +  C     LELG+Q+H    K GY S++R+  +
Sbjct: 260 KGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNS 319

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG---FMEKIADDEE------DVMVLF 452
           L+ +Y K G +  A+ L  G +      +NA+++G    ME   D+        + + LF
Sbjct: 320 LLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLF 379

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
           S+   +GM+PDP TFS +LS+ +    L +G  +HA +IKTG+ +DV+VG+++I MY KC
Sbjct: 380 SKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKC 439

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           GSI+ A ++F  +S R ++ W  M++ +A HG  K AL LFE+MK  G  P+ ++ +GVL
Sbjct: 440 GSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVL 499

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC  +G+       F  +++ Y ++P+++H+ C+VD+L R G++ EA +LI    +  S
Sbjct: 500 SACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKAS 559

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
             +W  L+       N +    A+++LL L+PKD  ++ L+ N Y   G  D+ ++V   
Sbjct: 560 EFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENI 619

Query: 693 MNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
           M + ++ +    SWI I  +++ F  + K   ES
Sbjct: 620 MREEKIGELKDWSWISIKDRVYSFQTNDKADIES 653



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 249/486 (51%), Gaps = 28/486 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L++  + +      Q +H  ++K+GS  D F ++ L+ +YAK  R++ AQ++FD M 
Sbjct: 76  YPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMN 135

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGE 179
            R+A+ WT+L+KGY+ +   +  + +  +M    E + + +T ++ L AC+ L     GE
Sbjct: 136 RRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGE 195

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE-NVFRGLAYKDVRCVNFMILEYNKA 238
           Q+HA+ IK   + +  +G +L S+Y   G   E     FR +  KDV      I    + 
Sbjct: 196 QLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEK 255

Query: 239 GESEMAFHVFVHLLSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           GE+     VFV +L  +   +PN+YT T+ +S C E   +E G Q+H L  K G    + 
Sbjct: 256 GEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLR 315

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS-----------GHGGKA 345
           V N+++ +Y K G   EA+R+F  +++ NL++W A+I+G+ +              G +A
Sbjct: 316 VRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEA 375

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +N F +    G+  D    ++V+  CS    LE G Q+H   IK G+LSDV +G++++++
Sbjct: 376 LNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINM 435

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           Y K G ++ A  +    S +    +  +++GF +      +  + LF   +L G+ P+ V
Sbjct: 436 YNKCGSIERASKVFLEMSIRTMILWTTMITGFAQH--GWSKQALNLFEDMKLVGIRPNLV 493

Query: 466 TFSRLLSLSASQACLVRGRSLHAYS----IKTGYAADVIVGN--ALITMYAKCGSIDGAF 519
           TF  +LS     AC   G    A++    ++  Y    ++ +   L+ M  + G +  AF
Sbjct: 494 TFVGVLS-----ACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAF 548

Query: 520 QIFKGI 525
            + K +
Sbjct: 549 DLIKKM 554



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 133/284 (46%), Gaps = 19/284 (6%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG  VHA   K G +++    N+L+ LY K   +  AQ+LF GM   + +TW ++I G
Sbjct: 295 LELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAG 354

Query: 134 YLDDGD--------YES---VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           +    +        Y+     L +   + RS  K +  T S +L  CS +     GEQIH
Sbjct: 355 HAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIH 414

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A  IK+GF ++V VG+S+I+MY   G    A  VF  ++ + +     MI  + + G S+
Sbjct: 415 ARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSK 474

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-FGVVREISVGNAI 301
            A ++F  +      PN  TF  V+S C     V E      +  K + +   +     +
Sbjct: 475 QALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCL 534

Query: 302 VTMYGKHGMSEEAERMFDAISERNLIS----WTALISGYVRSGH 341
           V M  + G  +EA   FD I + +  +    W+ LI G +  G+
Sbjct: 535 VDMLVRLGQVQEA---FDLIKKMDYKASEFIWSNLIVGCLSQGN 575



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 3/126 (2%)

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           FS  + +  E D   +  LL            + +H + +KTG   D  + + L+T+YAK
Sbjct: 61  FSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAK 120

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM--KREGFAPDDISIL 569
           CG ++ A Q+F  ++ R+ V+W  ++  Y  + + K A+ LFEEM    E + P + ++ 
Sbjct: 121 CGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECY-PSNYTLA 179

Query: 570 GVLQAC 575
             L AC
Sbjct: 180 IALNAC 185


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 194/678 (28%), Positives = 336/678 (49%), Gaps = 81/678 (11%)

Query: 91  NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM 150
           +D  + N  I+ Y +  + + A  +F+GM  RS +T+ ++I GYL +  ++    +   M
Sbjct: 58  SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
                                  DR                 ++     ++S Y  +G  
Sbjct: 118 ----------------------PDR-----------------DLISWNVMLSGYVKNGNL 138

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
             A  +F  +  KDV   N M+  + + G  E A  +F  +L      N+ ++  ++S  
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAY 194

Query: 271 YENLGVEEGKQLHGLAVKFGVV---------------------------REISVGNAIVT 303
            +N  +E+ ++L    + + +V                           R+    N ++T
Sbjct: 195 VQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMIT 254

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y ++G+  EA R+F+ +  R++ +WTA++SG+V++G   +A   F E  +      ++ 
Sbjct: 255 GYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAM 314

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           +A  +    +    EL  Q+           +      +V  YA+ G++  A++L D   
Sbjct: 315 IAGYVQSQQIEKARELFDQMPS--------RNTSSWNTMVTGYAQCGNIDQAKILFDEMP 366

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    + A++SG+ +  +   E+ + LF + +  G   +    +  LS  A  A L  G
Sbjct: 367 QRDCISWAAMISGYAQ--SGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELG 424

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + LH   +K G+    I GNAL+ MY KCGSI+ AF +F+ I+++DIVSWN M++ YA H
Sbjct: 425 KQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARH 484

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G GK AL LFE MK     PDD++++GVL AC ++GL + G+  FN + Q YG+    +H
Sbjct: 485 GFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKH 543

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           + CM+DLLGRAGRL EA+NL+ S PF      W  L+  S++  +++    A++++ ++E
Sbjct: 544 YTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEME 603

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P ++G ++L+SN+YA  G   E  ++R+ M D  + K  G SW+EI +K H F      H
Sbjct: 604 PDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSH 663

Query: 724 PESEEIYSKLDLLNDEMK 741
           PE+E IY+ L+ L+ E+K
Sbjct: 664 PEAERIYAYLEELDLELK 681



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 248/533 (46%), Gaps = 52/533 (9%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++   + +G+L   +A    L     + D    N +++ +A+   ++ A+K+FD ML
Sbjct: 125 WNVMLSGYVKNGNLSAARA----LFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML 180

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI---------LEACSL 171
           V++ I+W  L+  Y+ +G  E     A  ++ S+  +   + + +         L+    
Sbjct: 181 VKNEISWNGLLSAYVQNGRIED----ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARS 236

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
           L DR+         ++     N+     +I+ Y  +G   EA  +F  L  +DV     M
Sbjct: 237 LFDRM--------PVRDKISWNI-----MITGYAQNGLLSEARRLFEELPIRDVFAWTAM 283

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           +  + + G  + A  +F  +     E N+ ++  +I+   ++  +E+ ++L         
Sbjct: 284 VSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPS--- 336

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
            R  S  N +VT Y + G  ++A+ +FD + +R+ ISW A+ISGY +SG   +A++ F++
Sbjct: 337 -RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIK 395

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
               G   + S LA  +  C+  + LELG QLHG  +K G+ +    G AL+ +Y K G 
Sbjct: 396 MKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           ++ A  + +  + K    +N +++G+       E   + LF   ++  ++PD VT   +L
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE--ALALFESMKMT-IKPDDVTLVGVL 512

Query: 472 SLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRD 529
           S  +    + +G    ++     G  A+      +I +  + G +D A  + K +    D
Sbjct: 513 SACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPD 572

Query: 530 IVSWNAMLSAYALHG---LGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
             +W A+L A  +HG   LG+ A     EM+     PD+ S + VL + +Y+ 
Sbjct: 573 AATWGALLGASRIHGDTELGEKAAEKVFEME-----PDN-SGMYVLLSNLYAA 619



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 7/287 (2%)

Query: 53  ERTLLFNDWPQLVKISIGS---GDLKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNR 108
           E T +F + P+  ++S  +   G ++  Q   A  L       +T   N ++  YA+   
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGN 354

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           +D A+ LFD M  R  I+W ++I GY   G  E  L +   M R     N    +  L +
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSS 414

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C+ +     G+Q+H   +K+GF+     G +L++MY   G   EA +VF  +  KD+   
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAV 287
           N MI  Y + G  + A  +F   +    +P+D T   V+S C     V++G +  + +  
Sbjct: 475 NTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQ 533

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            +G+         ++ + G+ G  +EA  +  ++    +  +W AL+
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580


>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
 gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 333/636 (52%), Gaps = 11/636 (1%)

Query: 76  LGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           +G  VH  +LK G    +T    + +  Y+K   L  A  +FD M  R  + WT++I G+
Sbjct: 143 VGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGH 202

Query: 135 LDDGDYESVLGIACDMYRSE---EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           + +G+ E  LG  C M+ +    +K N  T     +ACS L     G  +H FA+K+G  
Sbjct: 203 VQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLA 262

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++ FV +S+ S Y  SG   EA   FR L  +D+     +I    ++G+ E +F +F  +
Sbjct: 263 SSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            +    P+    + +I+   + + V +GK  HG  ++     + +V N++++MY K  + 
Sbjct: 323 QNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELL 382

Query: 312 EEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             AE++F  ISE  N  +W  ++ GY +     K I  F +  +LGI  DS+   +VI  
Sbjct: 383 SVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISS 442

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA-RMLLDGFSCKYTAE 429
           CS    + LG  LH + +K      + +  +L+D+Y K GDL  A RM  +  +   T  
Sbjct: 443 CSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVIT-- 500

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +NA+++ ++    +  E  + LF +      +P  +T   LL    +   L RG+ +H Y
Sbjct: 501 WNAMIASYVH--CEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRY 558

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
             +T +  ++ +  ALI MYAKCG ++ + ++F   + +D V WN M+S Y +HG  + A
Sbjct: 559 ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESA 618

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           + LF++M+     P   + L +L AC ++GL E G  LF ++ Q Y ++P L+H++C+VD
Sbjct: 619 IALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVD 677

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LL R+G L EA + + S PFS   ++W TL+S        +  I  ++R +  +P++ G 
Sbjct: 678 LLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY 737

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
           +I+++NMY+  G  +EA + R  M +  + K AG S
Sbjct: 738 YIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 159/626 (25%), Positives = 303/626 (48%), Gaps = 21/626 (3%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           +A ++  G   + F A+ LI+ YA + + +++ ++F  +  R    W S+IK +  +GDY
Sbjct: 47  NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-SGFENNVFVGTS 199
              L     M  S +  +  T  +++ AC+ L     G  +H   +K  GF+ N  VG S
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE--MAFHVFVHLLSSDFE 257
            +  Y   G  ++A  VF  +  +DV     +I  + + GESE  + +   +H   SD +
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226

Query: 258 -PNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            PN  T       C  NLG ++EG+ LHG AVK G+     V +++ + Y K G   EA 
Sbjct: 227 KPNPRTLECGFQAC-SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
             F  + + ++ SWT++I+   RSG   ++ + F E  + G+  D   ++ +I+      
Sbjct: 286 LSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMM 345

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-----F 430
            +  G   HGF I+H +  D  +  +L+ +Y K   L  A  L     C+ + E     +
Sbjct: 346 LVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLF----CRISEEGNKEAW 401

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N +L G+ +         + LF + +  G+E D  + + ++S  +    ++ G+SLH Y 
Sbjct: 402 NTMLKGYGKMKC--HVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYV 459

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +KT     + V N+LI +Y K G +  A+++F   +D ++++WNAM+++Y      + A+
Sbjct: 460 VKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAI 518

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            LF+ M  E F P  I+++ +L AC+ +G  E G  +   I +       L   A ++D+
Sbjct: 519 ALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDM 577

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG-S 669
             + G L ++  L ++    +  + W  ++S   +  + + +I    ++ + + K  G +
Sbjct: 578 YAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMND 695
           F+ + +     G++++  K+   M+ 
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKMHQ 662



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 220/484 (45%), Gaps = 23/484 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G LK G+ +H F +K+G  +  F  +++ + Y+K      A   F  +      +WTS+I
Sbjct: 244 GALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSII 303

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE-DRIF----GEQIHAFAI 186
                 GD E       DM+   +    H   V++ +C + E  ++     G+  H F I
Sbjct: 304 ASLARSGDMEESF----DMFWEMQNKGMHPDGVVI-SCLINELGKMMLVPQGKAFHGFVI 358

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAF 245
           +  F  +  V  SL+SMY        AE +F  ++ + +    N M+  Y K        
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCI 418

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +F  + +   E +  + T+VIS C     V  GK LH   VK  +   ISV N+++ +Y
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
           GK G    A RMF   ++ N+I+W A+I+ YV      KAI  F   +       S  L 
Sbjct: 479 GKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLV 537

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           T++  C    +LE G  +H +  +  +  ++ L  AL+D+YAK G L+ +R L D  + K
Sbjct: 538 TLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N ++SG+   +  D E  + LF Q   + ++P   TF  LLS       + +G+ 
Sbjct: 598 DAVCWNVMISGY--GMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKK 655

Query: 486 L----HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAY 540
           L    H Y +K     ++   + L+ + ++ G+++ A      +    D V W  +LS+ 
Sbjct: 656 LFLKMHQYDVK----PNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC 711

Query: 541 ALHG 544
             HG
Sbjct: 712 MTHG 715



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 157/320 (49%), Gaps = 11/320 (3%)

Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           + +C ++L +E  ++ + L +  G+   I V + +++ Y  +G    + R+F  ++ R++
Sbjct: 31  VILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDI 90

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
             W ++I  +  +G   +++  F   L  G   D      V+  C+      +G  +HG 
Sbjct: 91  FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150

Query: 387 AIKH-GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
            +KH G+  +  +G + V  Y+K G L+ A ++ D    +    + AI+SG ++    + 
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQN--GES 208

Query: 446 EDVMVLFSQQRLAGME---PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           E  +    +   AG +   P+P T        ++   L  GR LH +++K G A+   V 
Sbjct: 209 EGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ 268

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
           +++ + Y+K G+   A+  F+ + D D+ SW +++++ A  G  + +  +F EM+ +G  
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH 328

Query: 563 PDDISILGVLQACIYSGLSE 582
           PD     GV+ +C+ + L +
Sbjct: 329 PD-----GVVISCLINELGK 343



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 11/204 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+   + +G L+ GQ +H ++ ++  + +   +  LI++YAK   L+ +++LFD    + 
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKD 598

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFG 178
           A+ W  +I GY   GD ES + +   M  S+ K    T   +L AC+   L+E   ++F 
Sbjct: 599 AVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF- 657

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNK 237
            ++H + +K   ++     + L+ +   SG   EAE+    + +  D      ++     
Sbjct: 658 LKMHQYDVKPNLKHY----SCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMT 713

Query: 238 AGESEMAFHVFVHLLSSDFEPNDY 261
            GE EM   +    ++SD + + Y
Sbjct: 714 HGEFEMGIRMAERAVASDPQNDGY 737


>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 199/678 (29%), Positives = 345/678 (50%), Gaps = 41/678 (6%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           +K  +++H+ ++KSG  N  F  NN+I++Y+K + +  A+ +FD M  R+ ++WT+++  
Sbjct: 19  IKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSV 78

Query: 134 YLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
             +       L +  +M  S+ E+ N+   S +L+AC L+ +   G+ +H    ++  + 
Sbjct: 79  LTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDV 138

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           ++ +  +L+ MY   G  R+A+ VF  +  K+    N +IL Y K G  + A  +F  + 
Sbjct: 139 DIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMP 198

Query: 253 SSD------------------------------FEPNDYTFTNVISVCYENLGVEEGKQL 282
             D                               + +++TF +V+  C  +  +  G+++
Sbjct: 199 EPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREI 258

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD------AISERNLISWTALISGY 336
           H   +K G        +A++ MY    +  EA ++FD      ++SE +L  W +++SG+
Sbjct: 259 HCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSE-SLALWNSMLSGH 317

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           V +G   +A++        G+  D    + V+  C    NL L  Q+HGF I  GY  D 
Sbjct: 318 VVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDC 377

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +G+ L+DIYAK G + +A  L +    K    ++++++G     +D  +    LF    
Sbjct: 378 VVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSD--KLAFSLFMDMI 435

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
             G++ D    S +L   +S A    G+ +H+  +K GY ++ +V  ALI MYAKCG I+
Sbjct: 436 HLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIE 495

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A  +F  +S+ D +SW +++   A +G  + A+ L  +M   G  P+ I+ILGVL AC 
Sbjct: 496 DALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACR 555

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
           +SGL E    +FN IE  +GL P  EH+ CMVD+LG+AGR  EA+ LI+  PF     +W
Sbjct: 556 HSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIW 615

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
            +L+       N   + + ++ LL   P+D   +I++SN+YA  GM D  +KVR T+  +
Sbjct: 616 SSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKI 675

Query: 697 RLSKEAGCSWIEIDSKLH 714
              K AG  + EI  K +
Sbjct: 676 G-KKRAGKIFYEIPFKFY 692



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/552 (24%), Positives = 261/552 (47%), Gaps = 56/552 (10%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +++LG+ VH  + ++    D    N L+++Y K   L  AQ++F  +  ++A +W +LI 
Sbjct: 120 NVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLIL 179

Query: 133 GYLDDG------------------DYESVLGIACD------------MYRSEEKFNEHTC 162
           GY   G                   + S++    D            M+    K +E T 
Sbjct: 180 GYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTF 239

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF----- 217
             +L+AC   ++ + G +IH + IKSGFE++ +  ++LI MY       EA  +F     
Sbjct: 240 PSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFR 299

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--YENLG 275
                + +   N M+  +   G+   A  +  H+  S    + YTF+ V+ +C  ++NL 
Sbjct: 300 NSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLS 359

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           +    Q+HG  +  G   +  VG+ ++ +Y K G    A R+F+ + ++++++W++LI+G
Sbjct: 360 L--ASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITG 417

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
             R G    A + F++ + LG+  D   ++ V+  CS  ++ + G Q+H   +K GY S+
Sbjct: 418 CARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESE 477

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
             + TAL+D+YAK GD++ A  L    S   T  + +I+ G  +      E+ + L  + 
Sbjct: 478 GVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQN--GRAEEAISLLHKM 535

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY----SIKTGYAADVIVG--NALITMY 509
             +G +P+ +T   +L+     AC   G    A+    SI+T +         N ++ + 
Sbjct: 536 IESGTKPNKITILGVLT-----ACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDIL 590

Query: 510 AKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
            + G  + A ++   +  + D   W+++L A   +     A ++ E +     +P+D+S+
Sbjct: 591 GQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLL--ATSPEDVSV 648

Query: 569 LGVLQACIYSGL 580
             ++ + +Y+ L
Sbjct: 649 Y-IMLSNVYAAL 659



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 232/503 (46%), Gaps = 30/503 (5%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K    S +L LG+ +H +++KSG ++  +  + LI++Y+    L  A K+FD   
Sbjct: 239 FPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYF 298

Query: 121 VRSAIT-----WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
             S+++     W S++ G++ +GDY   L +   M+RS  +F+ +T S++L+ C   ++ 
Sbjct: 299 RNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNL 358

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
               Q+H F I SG+E +  VG+ LI +Y   G    A  +F  L  KDV   + +I   
Sbjct: 359 SLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGC 418

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G  ++AF +F+ ++    + + +  + V+  C      + GKQ+H L +K G   E 
Sbjct: 419 ARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEG 478

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V  A++ MY K G  E+A  +F  +SE + +SWT++I G  ++G   +AI+   + ++ 
Sbjct: 479 VVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIES 538

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
           G   +   +  V+  C     +E    + +     HG +        +VDI  + G  + 
Sbjct: 539 GTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEE 598

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A  L+     K      + L G      +   D+  + ++  LA    D   +  L ++ 
Sbjct: 599 AVKLISEMPFKPDKTIWSSLLGACGTYKN--RDLANIVAEHLLATSPEDVSVYIMLSNVY 656

Query: 475 AS-----QACLVR-----------GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           A+         VR           G+  +    K  +   + +G      +AK G   G 
Sbjct: 657 AALGMWDSVSKVRETVKKIGKKRAGKIFYEIPFKFYFMEHLHLG------HAKQGLNGGV 710

Query: 519 FQIFKGISDRDIVSWNAMLSAYA 541
            ++   I + D+VSWN +++  A
Sbjct: 711 VKVIYPILEPDLVSWNNVIAGLA 733



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 38/407 (9%)

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C     ++  K LH   +K G    I + N ++++Y K     +A  MFD +  RN++SW
Sbjct: 13  CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW 72

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL-ATVIDGCSVCSNLELGLQLHGFAI 388
           T ++S    S    +A++ + E ++  I   +  L + V+  C +  N+ELG  +H    
Sbjct: 73  TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIF 132

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK-IADD--- 444
           +     D+ L  AL+D+Y K G L+ A+ +     CK    +N ++ G+ ++ + DD   
Sbjct: 133 QAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMK 192

Query: 445 ------EEDV------------------MVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                 E D+                  +   S     G++ D  TF  +L        L
Sbjct: 193 LFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDEL 252

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-----WNA 535
           + GR +H Y IK+G+ +     +ALI MY+ C  +  A +IF        VS     WN+
Sbjct: 253 MLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNS 312

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQI 594
           MLS + ++G    AL +   M R G   D  +   VL+ C+ +  LS         I   
Sbjct: 313 MLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSG 372

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           Y L  ++   + ++D+  + G ++ A+ L    P  +  + W +L++
Sbjct: 373 YELDCVVG--SILIDIYAKQGSINNALRLFERLP-DKDVVAWSSLIT 416



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 2/278 (0%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F  +  ++KI +   +L L   VH F++ SG + D    + LI++YAK   ++ A +LF+
Sbjct: 342 FYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFE 401

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            +  +  + W+SLI G    G  +    +  DM     + +    S++L+ACS L     
Sbjct: 402 RLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQH 461

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+H+  +K G+E+   V T+LI MY   G   +A ++F  L+  D      +I+   +
Sbjct: 462 GKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQ 521

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREIS 296
            G +E A  +   ++ S  +PN  T   V++ C  +  VEE   + + +    G++    
Sbjct: 522 NGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPE 581

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
             N +V + G+ G  EEA ++   +  + +   W++L+
Sbjct: 582 HYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLL 619


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 172/571 (30%), Positives = 305/571 (53%), Gaps = 10/571 (1%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H   +K+G   ++FV TSL+++Y      R+A  +F G+  K+V     +I  +    E
Sbjct: 98  LHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSE 157

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
             +A  VFV +L     P+ YT   ++S C     ++ G+Q+HG ++K+G     S+GN+
Sbjct: 158 PALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNS 217

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR-SGHGGKAINGFLEFLDLGICC 359
           +  +Y K G  E   R F    ++N+I+WT +IS       +    ++ FL+ L+ G+  
Sbjct: 218 LCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMP 277

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   L +V+  C    ++ LG Q+  F  K G  +++ +  + + +Y + G+   A  L 
Sbjct: 278 NEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLF 337

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDV---------MVLFSQQRLAGMEPDPVTFSRL 470
           +         +NA++SG+ + +   ++D+         + LF     + ++PD  TFS +
Sbjct: 338 EEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSI 397

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           LS+ ++   L +G  +HA +IKTG  +DV+V +AL+ MY KCGSI+ A + F  +  R  
Sbjct: 398 LSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTP 457

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           V+W +M+S Y+ HG  + A+ LFE+M   G  P++I+ + +L AC Y+GL E     F+ 
Sbjct: 458 VTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDM 517

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           +   Y + P+++H+ CMVD+  R GRL +A + I  + F  +  +W +LV+  +   N +
Sbjct: 518 MRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME 577

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            +  A+ RLL+L+PK   +++L+ NMY   G   + A+VR       +      SWI I 
Sbjct: 578 LAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIR 637

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            K++ F A    HP++ E+Y  L+ L ++ K
Sbjct: 638 DKVYFFRADDMTHPQATELYQLLENLLEKAK 668



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 246/500 (49%), Gaps = 26/500 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+   + +G L   +A+H  ++K+G+  D F A +L+N+Y +      A++LFDGM  ++
Sbjct: 82  LLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKN 141

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            +TWT+LI G+  + +    L +  +M       + +T   +L ACS       G+Q+H 
Sbjct: 142 VVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHG 201

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE- 242
           ++IK G +    +G SL  +Y  SG        F+G   K+V     MI   +   E E 
Sbjct: 202 YSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMI---SSCAEDEN 258

Query: 243 ---MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
              +   +F+ +L     PN++T T+V+S+C   L +  GKQ+     K G    + V N
Sbjct: 259 YLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKN 318

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR-----------SGHGGKAING 348
           + + +Y + G ++EA R+F+ +   ++I+W A+ISGY +              G +A+  
Sbjct: 319 STMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKL 378

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F + +   +  D    ++++  CS    LE G Q+H   IK G LSDV + +ALV++Y K
Sbjct: 379 FRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNK 438

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G ++ A         +    + +++SG+ +      +D + LF    L+G  P+ +TF 
Sbjct: 439 CGSIECATKAFVEMPTRTPVTWTSMISGYSQH--GRSQDAIQLFEDMVLSGARPNEITFV 496

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFK--G 524
            LLS + S A LV     +   ++  Y  + +V +   ++ M+ + G +D AF   K  G
Sbjct: 497 SLLS-ACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTG 555

Query: 525 ISDRDIVSWNAMLSAYALHG 544
               + + W+++++    HG
Sbjct: 556 FEPNEAI-WSSLVAGCRSHG 574



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 194/393 (49%), Gaps = 20/393 (5%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  ++  C E  G+   + LHG  VK G   ++ V  ++V +Y +   S +A R+FD + 
Sbjct: 79  YVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMP 138

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ++N+++WTALI+G+  +     A+  F+E L+LG       L  ++  CS    ++LG Q
Sbjct: 139 DKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQ 198

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +HG++IK+G  +   +G +L  +Y K GDL+S      G   K    +  ++S      A
Sbjct: 199 VHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMIS----SCA 254

Query: 443 DDEEDV---MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
           +DE  +   + LF      G+ P+  T + ++SL  ++  +  G+ + A+  K G  A++
Sbjct: 255 EDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANL 314

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA---------LHGLGKG-- 548
            V N+ + +Y + G  D A ++F+ +    I++WNAM+S YA         LH   +G  
Sbjct: 315 PVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQ 374

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF ++ R    PD  +   +L  C      E G  +     +   L  ++ + A +V
Sbjct: 375 ALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSA-LV 433

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           ++  + G +  A       P + +P+ W +++S
Sbjct: 434 NMYNKCGSIECATKAFVEMP-TRTPVTWTSMIS 465



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 13/226 (5%)

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G    S+    ++  C     L     LHG  +K G  +D+ + T+LV++Y +    + A
Sbjct: 71  GQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDA 130

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R L DG   K    + A+++G    +  +    + +F +    G  P   T   +LS  +
Sbjct: 131 RRLFDGMPDKNVVTWTALITG--HTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACS 188

Query: 476 SQACLVRGRSLHAYSIKTGYAADVI--VGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
           +   +  G+ +H YSIK  Y AD I  +GN+L  +Y K G ++   + FKG  D+++++W
Sbjct: 189 AARRIDLGQQVHGYSIK--YGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITW 246

Query: 534 NAMLSAYALH----GLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             M+S+ A       LG   L LF +M   G  P++ ++  V+  C
Sbjct: 247 TTMISSCAEDENYLDLG---LSLFLDMLEGGVMPNEFTLTSVMSLC 289


>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
 gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
          Length = 577

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 183/533 (34%), Positives = 288/533 (54%), Gaps = 5/533 (0%)

Query: 203 MYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY- 261
           MY  +G   +A  +F  +  +D    N MI  + K G  ++ F  F  + S  F   D  
Sbjct: 1   MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60

Query: 262 TFTNVISVC-YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           T T ++S C    LG    K +H LAV  G  REISVGNA++T Y K G S    ++FD 
Sbjct: 61  TLTTILSACDRPELGFVN-KMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDE 119

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + ERN+I+WTA+ISG V+S     ++  F+E  +  +  +S    + +  CS    L  G
Sbjct: 120 MLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREG 179

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q+HG   K G  SD  + +AL+D+Y+K G +     + +            IL+GF + 
Sbjct: 180 CQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQN 239

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
               EE+ M  F +   AG E D    S +L +  +   L  G+ +H+  IK  + ++  
Sbjct: 240 --GFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPF 297

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           VGN LI MY+KCG ++ + ++F  +   + VSWN+M++A+A HG G  AL L++EM+ +G
Sbjct: 298 VGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKG 357

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             P D++ L +L AC + GL E G+     + +++ L P +EH+AC+VD+LGRAG L+EA
Sbjct: 358 VEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEA 417

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
              I   P     L+W+ L+    +  + +    A++ L+   P+    +IL++N+Y+ +
Sbjct: 418 KTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANIYSSK 477

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           G   E AK    M ++ ++KE G SWIEI++ LH FV   K HP++E IY  L
Sbjct: 478 GRWKERAKTIKRMKEMCVAKETGISWIEIENNLHSFVVEDKMHPQAEIIYGVL 530



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 222/456 (48%), Gaps = 25/456 (5%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM-----YRSEEK 156
           +YAK   L  A KLFD M +R  ++W  +I G+L DG ++   G    M     YR    
Sbjct: 1   MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYR---- 56

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            ++ T + IL AC   E     + +H  A+ +GF+  + VG +LI+ YF  G       V
Sbjct: 57  LDQATLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQV 116

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  +  ++V     +I    ++     +  +FV + +   EPN  T+ + +  C     +
Sbjct: 117 FDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQAL 176

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
            EG Q+HG   K G+  +  V +A++ MY K G   +  ++F++  + + +S T +++G+
Sbjct: 177 REGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGF 236

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            ++G   +A+  F++ L+ G   DS+ ++ V+      ++L LG Q+H   IK  + S+ 
Sbjct: 237 AQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNP 296

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +G  L+++Y+K GDL+ +  +     C  +  +N++++ F      D    + L+ + R
Sbjct: 297 FVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARH--GDGSRALQLYKEMR 354

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRG-------RSLHAYSIKTGYAADVIVGNALITMY 509
           L G+EP  VTF  LL   +    + +G         +H  + +  + A V      + M 
Sbjct: 355 LKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACV------VDML 408

Query: 510 AKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHG 544
            + G ++ A    +G+  + D++ W A+L A  +HG
Sbjct: 409 GRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHG 444



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 156/351 (44%), Gaps = 1/351 (0%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           + + VH   + +G Q +    N LI  Y K        ++FD ML R+ ITWT++I G +
Sbjct: 77  VNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWTAIISGLV 136

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
               Y   L +  +M     + N  T    L ACS L+    G QIH    K G +++  
Sbjct: 137 QSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQIHGRVWKLGLQSDFC 196

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V ++L+ MY   G   +   +F      D   +  ++  + + G  E A   FV +L + 
Sbjct: 197 VESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKMLEAG 256

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            E +    + V+ V   +  +  G+Q+H L +K        VGN ++ MY K G  E++ 
Sbjct: 257 TEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDST 316

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++F  +   N +SW ++I+ + R G G +A+  + E    G+        +++  CS   
Sbjct: 317 KVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVG 376

Query: 376 NLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            +E G++ L      H     +     +VD+  + G L  A+  ++G   K
Sbjct: 377 LVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKTFIEGLPIK 427



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 118/262 (45%), Gaps = 2/262 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G  +H  + K G Q+D    + L+++Y+K   +    ++F+       ++ T ++ G
Sbjct: 176 LREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAG 235

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           +  +G  E  +     M  +  + + +  S +L           G+QIH+  IK  F +N
Sbjct: 236 FAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSN 295

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            FVG  LI+MY   G   ++  VF  +   +    N MI  + + G+   A  ++  +  
Sbjct: 296 PFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRL 355

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
              EP D TF +++  C     VE+G + L  +     +   +     +V M G+ G+  
Sbjct: 356 KGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLN 415

Query: 313 EAERMFDAIS-ERNLISWTALI 333
           EA+   + +  + +++ W AL+
Sbjct: 416 EAKTFIEGLPIKPDVLVWQALL 437



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 11/195 (5%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L LGQ +H+ ++K    ++ F  N LIN+Y+K   L+ + K+F  M   ++++W S+I  
Sbjct: 277 LGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAA 336

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFAIKS 188
           +   GD    L +  +M     +  + T   +L ACS   L+E              +  
Sbjct: 337 FARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTP 396

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHV 247
             E+   V    + M   +G   EA+    GL  K DV     ++      G+ EM  + 
Sbjct: 397 RMEHYACV----VDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYA 452

Query: 248 FVHL-LSSDFEPNDY 261
             HL LS+  +P+ Y
Sbjct: 453 AEHLILSAPEKPSPY 467


>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 185/617 (29%), Positives = 315/617 (51%), Gaps = 37/617 (5%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
           H    +L AC+  +    G+Q+HA  I  G + N  + + L++ Y +     +A+ V   
Sbjct: 82  HPIGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTES 141

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
               D    N +I  Y + G    A  V+ ++L+   EP++YT+ +V+  C E+L    G
Sbjct: 142 SNTLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSG 201

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
            ++H       +   + V NA+V+MYG+ G  E A  +FD +  R+ +SW  +IS Y   
Sbjct: 202 LEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASR 261

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGC---------------------------- 371
           G   +A   F    + G+  +     T+  GC                            
Sbjct: 262 GIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMV 321

Query: 372 ---SVCSNL---ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
              + CS++   +LG ++HG A++  +     +  AL+ +Y++  DL  A +L      K
Sbjct: 322 VGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEK 381

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +NA+LSG+     D  E+V  LF +    GMEP+ VT + +L L A  A L  G+ 
Sbjct: 382 GLITWNAMLSGYAH--MDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKE 439

Query: 486 LHAYSIK-TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            H Y +K   +   +++ NAL+ MY++ G +  A ++F  ++ RD V++ +M+  Y + G
Sbjct: 440 FHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKG 499

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
            G+  L LFEEM +    PD ++++ VL AC +SGL   G  LF  +  ++G+ P LEH+
Sbjct: 500 EGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHY 559

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
           ACM DL GRAG L++A   I   P+  +  +W TL+   ++  N++    A+ +LL+++P
Sbjct: 560 ACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKP 619

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
             +G ++L++NMYA  G   + A+VRT M +L + K  GC+W+++ S+   F+     +P
Sbjct: 620 DHSGYYVLIANMYAAAGSWRKLAEVRTYMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSNP 679

Query: 725 ESEEIYSKLDLLNDEMK 741
            + EIY  +D LN+ MK
Sbjct: 680 HASEIYPLMDGLNELMK 696



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/524 (23%), Positives = 226/524 (43%), Gaps = 42/524 (8%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ +HA ++  G   +    + L+N Y   N L  AQ + +       + W  LI  
Sbjct: 97  LSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISA 156

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+ +G +   L +  +M   + + +E+T   +L+AC    D   G ++H     S  E +
Sbjct: 157 YVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWS 216

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FV  +L+SMY   G    A ++F  +  +D    N +I  Y   G  + AF +F  +  
Sbjct: 217 LFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQE 276

Query: 254 SDFEPNDYTFTNV----------------------------------ISVCYENLGVEEG 279
              E N   +  +                                  ++ C     ++ G
Sbjct: 277 EGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIKLG 336

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           K++HG AV+       +V NA++TMY +      A  +F    E+ LI+W A++SGY   
Sbjct: 337 KEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHM 396

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRL 398
               +    F E L  G+  +   +A+V+  C+  +NL+ G + H + +KH    + + L
Sbjct: 397 DRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLL 456

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
             ALVD+Y++ G +  AR + D  + +    + +++ G+  K   + E  + LF +    
Sbjct: 457 WNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMK--GEGETTLKLFEEMCKL 514

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDG 517
            ++PD VT   +L+  +    + +G+ L    I   G    +     +  ++ + G ++ 
Sbjct: 515 EIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNK 574

Query: 518 AFQIFKGISDRDIVS-WNAMLSAYALHG---LGKGALLLFEEMK 557
           A +   G+  +   + W  +L A  +HG   +G+ A     EMK
Sbjct: 575 AKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMK 618



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 191/449 (42%), Gaps = 41/449 (9%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K    S D   G  VH  +  S  +   F  N L+++Y +F +L++A+ LFD M 
Sbjct: 185 YPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMP 244

Query: 121 VRSAITWTSLIKGY-----------------------------------LDDGDYESVLG 145
            R +++W ++I  Y                                   L  G++   L 
Sbjct: 245 RRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQ 304

Query: 146 IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYF 205
           +   M R+    +     V L ACS +     G++IH  A+++ F+    V  +LI+MY 
Sbjct: 305 LISQM-RTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYS 363

Query: 206 HSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
                  A  +F     K +   N M+  Y      E    +F  +L    EPN  T  +
Sbjct: 364 RCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIAS 423

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVRE-ISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           V+ +C     ++ GK+ H   +K     E + + NA+V MY + G   EA ++FD++++R
Sbjct: 424 VLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKR 483

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           + +++T++I GY   G G   +  F E   L I  D   +  V+  CS    +  G  L 
Sbjct: 484 DEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLF 543

Query: 385 GFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
              I  HG +  +     + D++ + G L  A+  + G   K T+   A L G      +
Sbjct: 544 KRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGN 603

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            E   M  ++  +L  M+PD   +  L++
Sbjct: 604 TE---MGEWAAGKLLEMKPDHSGYYVLIA 629


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 174/593 (29%), Positives = 316/593 (53%), Gaps = 6/593 (1%)

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-FENNVFVGTSLISMYFHSGCFR 211
           S   F+   C  +L++ +  +      Q+HA     G    N ++ T L + Y   G   
Sbjct: 16  STSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMP 75

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
            A+++F  +  K+    N MI  Y        A  +++ +L    +P+++T+  V+  C 
Sbjct: 76  YAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACG 135

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
           + L  E G+++H L V  G+  ++ VGN+I++MY K G  E A  +FD +  R+L SW  
Sbjct: 136 DLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNT 195

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           ++SG+V++G    A   F +    G   D + L  ++  C    +L++G ++HG+ +++G
Sbjct: 196 MMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNG 255

Query: 392 YLSDVRLG---TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
               V  G    +++D+Y     +  AR L +G   K    +N+++SG+ EK  D  +  
Sbjct: 256 ESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGY-EKCGDAFQ-A 313

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
           + LF +  + G  PD VT   +L+     + L  G ++ +Y +K GY  +V+VG ALI M
Sbjct: 314 LELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGM 373

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           YA CGS+  A ++F  + ++++ +   M++ + +HG G+ A+ +F EM  +G  PD+   
Sbjct: 374 YANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIF 433

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
             VL AC +SGL + G  +F ++ + Y + P   H++C+VDLLGRAG L EA  +I +  
Sbjct: 434 TAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMK 493

Query: 629 FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAK 688
              +  +W  L+S  +L  N K +++++++L +L P     ++ +SN+YA +   ++   
Sbjct: 494 LKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVEN 553

Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           VR  +   RL K    S++E++  +H F      H +S++IY+KL  LN+++K
Sbjct: 554 VRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLK 606



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 246/510 (48%), Gaps = 24/510 (4%)

Query: 71  SGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           S  L     +HA +   G+ + +T+ A  L   YA    +  AQ +FD ++++++  W S
Sbjct: 35  SKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNS 94

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I+GY  +      L +   M    +K +  T   +L+AC  L  R  G ++HA  +  G
Sbjct: 95  MIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGG 154

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            E +V+VG S++SMYF  G    A  VF  +  +D+   N M+  + K GE+  AF VF 
Sbjct: 155 LEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFG 214

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG---NAIVTMYG 306
            +    F  +  T   ++S C + + ++ GK++HG  V+ G    +  G   N+I+ MY 
Sbjct: 215 DMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYC 274

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
                  A ++F+ +  ++++SW +LISGY + G   +A+  F   + +G   D   + +
Sbjct: 275 NCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVIS 334

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           V+  C+  S L LG  +  + +K GY+ +V +GTAL+ +YA  G L  A  + D    K 
Sbjct: 335 VLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKN 394

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
                 +++GF   I     + + +F +    G+ PD   F+ +LS  +    +  G+ +
Sbjct: 395 LPACTVMVTGF--GIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEI 452

Query: 487 HAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS---DRDIVSWNAMLSAYA 541
             Y +   Y+ +    +   L+ +  + G +D A+ + + +    + D+  W A+LSA  
Sbjct: 453 F-YKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDV--WTALLSACR 509

Query: 542 LHGLGKGALL----LFEEMKREGFAPDDIS 567
           LH   K A++    LFE        PD +S
Sbjct: 510 LHRNVKLAVISAQKLFE------LNPDGVS 533


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 183/534 (34%), Positives = 297/534 (55%), Gaps = 8/534 (1%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCY 271
           A +VF      DV   N M+  +  +     A   +  +L  S   P+ +TF +++  C 
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
             L  + GK LHG  VK+ +  ++ +   ++ MY   G  + A  +F+ +  RN + WT+
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           +ISGY+++    +A+  + +  + G   D   +AT++  C+   +L +G++LH    +  
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
                 LG+ALV++YAK GDLK+AR + D  S K    ++A++ G+++   +   + + L
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKN--NRSTEALQL 268

Query: 452 FSQQRLAG---MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
           F +  +AG   M P+ VT   ++S  A    L  GR +H Y  +T     V + N+LI M
Sbjct: 269 FRE--VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDM 326

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           ++KCG ID A +IF  +S +D++SWN+M++  ALHGLG+ AL  F  M+     PD+I+ 
Sbjct: 327 FSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITF 386

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
           +GVL AC ++GL + G  LF EIE +YG+R   EH+ CMVDLL RAG L+EA   I   P
Sbjct: 387 IGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP 446

Query: 629 FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAK 688
                 +W +++   ++  N +    A++ LL+LEP + G +IL+SN+YA + M +E  K
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKK 506

Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
           VR  MN+  + K  GCS + ID+  H F+A    HPE  EI   L  + +++KL
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKL 560



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 178/361 (49%), Gaps = 8/361 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K      + K+G+ +H  ++K    +D +    L+N+YA    L  A+ LF+ M 
Sbjct: 82  FPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMG 141

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ + WTS+I GY+ +      L +   M       +E T + ++ AC+ L+D   G +
Sbjct: 142 HRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMK 201

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H+   +   +    +G++L++MY   G  + A  VF  L+ KDV   + +I  Y K   
Sbjct: 202 LHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNR 261

Query: 241 SEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           S  A  +F  +   S+  PN+ T   VIS C +   +E G+ +H    +      +S+ N
Sbjct: 262 STEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN 321

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +++ M+ K G  + A+R+FD++S ++LISW ++++G    G G +A+  F       +  
Sbjct: 322 SLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQP 381

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT----ALVDIYAKGGDLKSA 415
           D      V+  CS    ++ G +L  + I+  Y   VRL +     +VD+  + G L  A
Sbjct: 382 DEITFIGVLTACSHAGLVQEGKKLF-YEIEALY--GVRLKSEHYGCMVDLLCRAGLLAEA 438

Query: 416 R 416
           R
Sbjct: 439 R 439



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 206/435 (47%), Gaps = 12/435 (2%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACS 170
           A  +F    V   +TW S+++ +++       L    +M  RS    +  T   +L+ C+
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
           LL +   G+ +H   +K    +++++ T+L++MY   G  + A  +F  + +++      
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE--NLGVEEGKQLHGLAVK 288
           MI  Y K      A  ++  +    F P++ T   ++S C E  +LGV  G +LH    +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV--GMKLHSHIRE 208

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
             +     +G+A+V MY K G  + A ++FD +S++++ +W+ALI GYV++    +A+  
Sbjct: 209 MDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQL 268

Query: 349 FLEFL-DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA 407
           F E      +  +   +  VI  C+   +LE G  +H +  +      V L  +L+D+++
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFS 328

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           K GD+ +A+ + D  S K    +N++++G    +     + +  F   +   ++PD +TF
Sbjct: 329 KCGDIDAAKRIFDSMSYKDLISWNSMVNGL--ALHGLGREALAQFHLMQTTDLQPDEITF 386

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGI 525
             +L+  +    +  G+ L  Y I+  Y   +   +   ++ +  + G +  A +  + +
Sbjct: 387 IGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVM 445

Query: 526 S-DRDIVSWNAMLSA 539
               D   W +ML A
Sbjct: 446 PLQPDGAIWGSMLGA 460


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 202/686 (29%), Positives = 340/686 (49%), Gaps = 13/686 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+  + +HA L+ S    +   +  L+NLY     + +A+  FD +  R    W  +I 
Sbjct: 66  NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125

Query: 133 GYLDDGDYESVLG-IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           GY   G+   V+   +  M  S    +  T   +L+AC  + D   G +IH  A+K GF 
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFM 182

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +V+V  SLI +Y        A  +F  +  +D+   N MI  Y ++G ++ A  +   L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            + D      T  +++S C E      G  +H  ++K G+  E+ V N ++ +Y + G  
Sbjct: 243 RAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            + +++FD +  R+LISW ++I  Y  +    +AI+ F E     I  D   L ++    
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358

Query: 372 SVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           S   ++     + GF ++ G+ L D+ +G A+V +YAK G + SAR + +         +
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N I+SG+ +     E   M    ++    +  +  T+  +L   +    L +G  LH   
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEE-GEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +K G   DV V  +L  MY KCG ++ A  +F  I   + V WN +++ +  HG G+ A+
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 537

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
           +LF+EM  EG  PD I+ + +L AC +SGL + G   F  ++  YG+ P L+H+ CMVD+
Sbjct: 538 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
            GRAG+L  A+  I S        +W  L+S  ++  N     +AS+ L ++EP+  G  
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 657

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           +L+SNMYA  G  +   ++R+  +   L K  G S +E+D+K+  F    + HP  EE+Y
Sbjct: 658 VLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMY 717

Query: 731 SKLDLLNDEMKL--KVKDSSAFELQD 754
            +L  L  ++K+   V D   F LQD
Sbjct: 718 RELTALQAKLKMIGYVPDHR-FVLQD 742



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 191/406 (47%), Gaps = 8/406 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +GD   G  +H++ +K G +++ F +N LI+LYA+F RL   QK+FD M VR  I+W S+
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG- 189
           IK Y  +      + +  +M  S  + +  T   +    S L D      +  F ++ G 
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF- 248
           F  ++ +G +++ MY   G    A  VF  L   DV   N +I  Y + G +  A  ++ 
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +     +   N  T+ +V+  C +   + +G +LHG  +K G+  ++ V  ++  MYGK 
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  E+A  +F  I   N + W  LI+ +   GHG KA+  F E LD G+  D     T++
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559

Query: 369 DGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
             CS    ++ G          +G    ++    +VD+Y + G L++A   +   S +  
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619

Query: 428 AE-FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           A  + A+LS        D   +    + + L  +EP+ V +  LLS
Sbjct: 620 ASIWGALLSACRVHGNVDLGKI----ASEHLFEVEPEHVGYHVLLS 661



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 18/296 (6%)

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           C+NL+    LH   +    + +V +   LV++Y   G++  AR   D    +    +N +
Sbjct: 64  CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123

Query: 434 LSGFMEKIADDEEDVMVLFSQQRL-AGMEPDPVTFSRLLSLSASQAC--LVRGRSLHAYS 490
           +SG+    A +  +V+  FS   L +G+ PD  TF  +L     +AC  ++ G  +H  +
Sbjct: 124 ISGYGR--AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL-----KACRTVIDGNKIHCLA 176

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           +K G+  DV V  +LI +Y++  ++  A  +F  +  RD+ SWNAM+S Y   G  K AL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            L   ++    A D ++++ +L AC  +G    G+ + +     +GL   L     ++DL
Sbjct: 237 TLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDL 291

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS--KFSILASKRLLDLEP 664
               GRL +   + +   +    + W +++   +L        S+    RL  ++P
Sbjct: 292 YAEFGRLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 52/110 (47%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++     +G L+ G  +H  LLK+G   D F   +L ++Y K  RL+ A  LF  + 
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
             +++ W +LI  +   G  E  + +  +M     K +  T   +L ACS
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 171/505 (33%), Positives = 287/505 (56%), Gaps = 7/505 (1%)

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           S    HV   + +   EP+   +  ++  C     +++GK +H   +      ++ + N+
Sbjct: 72  STTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNS 131

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL---GI 357
           I+ MY K G  E A ++FD +  +++++WT++I+GY + G+   A    + FL++   G+
Sbjct: 132 ILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGL 191

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +   L++++  C    +   G Q+HG   K+G+  +V +G++LVD+YA+ G+L+ +R+
Sbjct: 192 RPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRL 251

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +NA++SGF  K   + E+ + LF + +  G      T+S LL  S++ 
Sbjct: 252 VFDELESKNEVSWNALISGFARK--GEGEEALGLFVKMQREGFGATEFTYSALLCSSSTT 309

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L +G+ LHA+ +K+G      VGN L+ MYAK G+I  A ++F  +   D+VS N+ML
Sbjct: 310 GSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSML 369

Query: 538 SAYALHGLGKGALLLFEEMK-REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
             YA HGLGK A+ LFEEM       P+DI+ L VL AC ++GL + G+  F E+ + YG
Sbjct: 370 IGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYF-ELMKKYG 428

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           L P L H+  +VDL GRAG L +A + I   P   +  +W  L+  SK+  N++    A+
Sbjct: 429 LEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAA 488

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           +++L+L+P   G+  L+SN+YA  G   + AKVR  M D  L KE  CSW+EI++ +H F
Sbjct: 489 QKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIF 548

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
            A+   HP+  ++Y   + LN ++K
Sbjct: 549 SANDISHPQKNKVYEMWENLNQKIK 573



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 219/436 (50%), Gaps = 10/436 (2%)

Query: 31  TFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQ 90
           + +PN  + +  L  I++ S      ++N   +L+K     G LK G+ VH  L+ S  +
Sbjct: 67  SLNPNSTTGLHVLDLINNGSLEPDRTIYN---KLLKRCTMLGKLKQGKLVHTHLMNSKFR 123

Query: 91  NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG---DYESVLGIA 147
           ND    N+++ +YAK   L++A+++FD M V+  +TWTS+I GY  DG      + L + 
Sbjct: 124 NDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLF 183

Query: 148 CDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
            +M R   + NE   S +++ C  L   + G+QIH    K GF+ NVFVG+SL+ MY   
Sbjct: 184 LEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARC 243

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
           G  RE+  VF  L  K+    N +I  + + GE E A  +FV +    F   ++T++ ++
Sbjct: 244 GELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALL 303

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
                   +E+GK LH   +K G      VGN ++ MY K G   +A+++FD + + +++
Sbjct: 304 CSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVV 363

Query: 328 SWTALISGYVRSGHGGKAINGFLE-FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           S  +++ GY + G G +A+  F E  L + I  +     +V+  CS    L+ GL     
Sbjct: 364 SCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFEL 423

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
             K+G    +   T +VD++ + G L  A+  ++    +  A     L G  +   + E 
Sbjct: 424 MKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTE- 482

Query: 447 DVMVLFSQQRLAGMEP 462
             M  ++ Q++  ++P
Sbjct: 483 --MGAYAAQKVLELDP 496


>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
 gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
          Length = 770

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 205/677 (30%), Positives = 344/677 (50%), Gaps = 21/677 (3%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           LG  +H F +     N T  +N+L+N+Y K  +   A  +F+ +     ++W +++ G  
Sbjct: 82  LGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQ 141

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF--GEQIHAFAIKSGFENN 193
                E     AC M  S   F+  T + +L  C    +  F  G Q+H+  +K GF+  
Sbjct: 142 TS---EDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCE 198

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVFVHLL 252
           VFVG +LISMY   G   EA  VF  +  +D+   N MI  Y++ G   + A  +F+ + 
Sbjct: 199 VFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMF 258

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               E +  +FT+ +S C     +E  +Q+HGL++K    + ++V N +++ Y K  + E
Sbjct: 259 RGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIE 318

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A  +F  ++ERN++SWT +IS         +A++ F E    G+  +      +I   +
Sbjct: 319 DARLVFQNMNERNVVSWTTMISI-----DEAEAVSFFNEMRLDGVYPNDVTFVGLIHAIT 373

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
           +   +  G  +HGF  K G+ S   +  +++ +YAK   ++ +  +      +    +NA
Sbjct: 374 IGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNA 433

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL--SASQACLVRGRSLHAYS 490
           ++SGF+      +E +   FS   L   +P+  +F  +L+   +A    L  G+  H+  
Sbjct: 434 LISGFVHN-GLCQEAIRAFFSG--LIESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQI 490

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK G   D IV +AL+ MYAK GSI  + ++F     +   +W  ++SAYA HG  +  +
Sbjct: 491 IKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVM 550

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
             FEEM+R    PD I+ L +L AC   G+ + G  LF  + + Y + P  EH++C+VD+
Sbjct: 551 NWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDM 610

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGRAGRL EA  L++  P      + ++L+   ++  N       +  L+++EP ++GS+
Sbjct: 611 LGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADALMEMEPTESGSY 670

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE---IDS--KLHHFVASGKDHPE 725
           +L+SN+YA  G  +  AKVR  M    + KE G SW++   IDS   LH F +    HP+
Sbjct: 671 VLMSNLYAEIGKWEMVAKVRKRMRVKGVKKEVGFSWVDVGGIDSSLSLHGFSSGDTSHPQ 730

Query: 726 SEEIYSKLDLLNDEMKL 742
           SE I    + L  EMK 
Sbjct: 731 SEAICRMAECLGFEMKF 747



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 159/537 (29%), Positives = 270/537 (50%), Gaps = 29/537 (5%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +E T +  L+AC      + G QIH F+I   F N   V  SL++MY  SG F +A  +F
Sbjct: 65  DEFTVANALKACRGYP--LLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIF 122

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             L + D+   N ++   +    SE AF     + SS    +  T+T V+S C+ +  VE
Sbjct: 123 ENLTHPDIVSWNTVL---SGCQTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRH--VE 177

Query: 278 E----GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
                G QLH   VKFG   E+ VGNA+++MY + G   EA R+F+ +  R+L+SW A+I
Sbjct: 178 AYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMI 237

Query: 334 SGYVRSG-HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           SGY + G +G +AI+ FL+    G+  D     + +  C    NLEL  Q+HG +IK  +
Sbjct: 238 SGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRH 297

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
              V +   L+  Y K   ++ AR++    + +    +  ++S        DE + +  F
Sbjct: 298 EKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS-------IDEAEAVSFF 350

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
           ++ RL G+ P+ VTF  L+        +V+G+ +H +  KTG+++   V N++ITMYAK 
Sbjct: 351 NEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKF 410

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI---SIL 569
            S+  + ++F+ +  +DI++WNA++S +  +GL + A+  F     E   P+     SIL
Sbjct: 411 KSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIES-KPNQYSFGSIL 469

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
             + A     L  G  C    I+      PI+   + ++D+  + G + E+  +   +P 
Sbjct: 470 NAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVS--SALLDMYAKRGSICESQKVFVETP- 526

Query: 630 SESPLLWRTLVSVSKLMAN--SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
            +S   W T++S      +  S  +     R L++ P D+ +F+ +      +GM+D
Sbjct: 527 QQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRP-DSITFLSILTACGRRGMVD 582



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 68  SIGSGD---LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +IG+ +   LK GQ  H+ ++K G   D   ++ L+++YAK   +  +QK+F     +S 
Sbjct: 471 AIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQ 530

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL-----LEDRIFGE 179
             WT++I  Y   GDYESV+    +M R E + +  T   IL AC       +   +FG 
Sbjct: 531 FAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGS 590

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            +  + I+   E+     + L+ M   +G   EAE +
Sbjct: 591 MVKDYQIEPSAEHY----SCLVDMLGRAGRLEEAERL 623



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 3/125 (2%)

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           +  +  L+G   +   F+   +L A +   + G  +H +SI   +    IV N+L+ MY 
Sbjct: 51  IIKEHLLSGFINNIDEFTVANALKACRGYPLLGSQIHGFSIIHEFVNVTIVSNSLMNMYC 110

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           K G    A  IF+ ++  DIVSWN +LS        + A     +M   G   D ++   
Sbjct: 111 KSGQFCKALCIFENLTHPDIVSWNTVLSGCQ---TSEDAFSFACKMNSSGVVFDAVTYTT 167

Query: 571 VLQAC 575
           VL  C
Sbjct: 168 VLSFC 172


>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 197/634 (31%), Positives = 323/634 (50%), Gaps = 8/634 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           +  H  L  +G   D   A  L++LY  F     A+ +FD +       W  +++ Y  +
Sbjct: 73  RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLN 132

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-SGFENNVFV 196
            +   V+     + +    +++   S  L+AC+ ++D   G++IH   +K   F+N V  
Sbjct: 133 NESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLT 192

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           G  L+ MY   G  + +  VF  +  ++V C   MI  Y K    E    +F  +  +  
Sbjct: 193 G--LLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSV 250

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
             N+YT+  ++  C +   + +GK  HG  +K G+     +  +++ MY K G    A R
Sbjct: 251 LGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARR 310

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F+  S  +L+ WTA+I GY  +G   +A++ F +   +GI  +   +A+V+ GC +  N
Sbjct: 311 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGN 370

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           LELG  +HG +IK G + D  +  ALV +YAK    + A+ + +  S K    +N+I+SG
Sbjct: 371 LELGRSIHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISG 429

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F +  +  E   + LF +     + P+ VT + L S  AS   L  G SLHAYS+K G+ 
Sbjct: 430 FSQNGSIHE--ALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFL 487

Query: 497 A--DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           A   V VG AL+  YAKCG  + A  IF  I +++ ++W+AM+  Y   G  KG+L LFE
Sbjct: 488 ASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFE 547

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           EM ++   P++ +   VL AC ++G+   G   F+ + + Y   P  +H+ CMVD+L RA
Sbjct: 548 EMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARA 607

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G L +A+++I   P       +   +    + +      +  K++LDL P DA  ++LVS
Sbjct: 608 GELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVS 667

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           N+YA  G   +A +VR  M    LSK AG S +E
Sbjct: 668 NLYASDGRWSQAKEVRNLMKQRGLSKIAGHSIME 701



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 250/534 (46%), Gaps = 10/534 (1%)

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
           C ++L  C+ ++      Q H     +G   ++ + T L+S+Y   G  ++A  VF  + 
Sbjct: 59  CFLLLSKCTNIDSL---RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIP 115

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
             D      ++  Y    ES      +  L+   F  +D  F+  +  C E   ++ GK+
Sbjct: 116 EPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKK 175

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +H   VK      + V   ++ MY K G  + + ++F+ I+ RN++ WT++I+GYV++  
Sbjct: 176 IHCQIVKVPSFDNV-VLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDL 234

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             + +  F    +  +  +     T++  C+    L  G   HG  IK G      L T+
Sbjct: 235 YEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTS 294

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L+D+Y K GD+ +AR + +  S      + A++ G+    + +E   + LF +    G++
Sbjct: 295 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE--ALSLFQKMSGVGIK 352

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           P+ VT + +LS       L  GRS+H  SIK G   D  V NAL+ MYAKC     A  +
Sbjct: 353 PNCVTIASVLSGCGLVGNLELGRSIHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYV 411

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           F+  S++DIV+WN+++S ++ +G    AL LF  M  E   P+ +++  +  AC   G  
Sbjct: 412 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSL 471

Query: 582 EGGICLFNEIEQIYGLRPILEHF-ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
             G  L     ++  L     H    ++D   + G  +E+  LI  +   ++ + W  ++
Sbjct: 472 AIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD-AESARLIFDTIEEKNTITWSAMI 530

Query: 641 SVSKLMANSKFSILASKRLLDLEPK-DAGSFILVSNMYAGQGMLDEAAKVRTTM 693
                  ++K S+   + +L  + K +  +F  V +  +  GM++E  K  ++M
Sbjct: 531 GGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSM 584



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 187/404 (46%), Gaps = 11/404 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+  H  L+KSG +  +    +L+++Y K   +  A+++F+       + WT++I G
Sbjct: 270 LHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVG 329

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-FEN 192
           Y  +G     L +   M     K N  T + +L  C L+ +   G  IH  +IK G ++ 
Sbjct: 330 YTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDT 389

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N  V  +L+ MY      R+A+ VF   + KD+   N +I  +++ G    A  +F  + 
Sbjct: 390 N--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 447

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV--REISVGNAIVTMYGKHGM 310
           +    PN  T  ++ S C     +  G  LH  +VK G +    + VG A++  Y K G 
Sbjct: 448 TESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 507

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
           +E A  +FD I E+N I+W+A+I GY + G    ++  F E L      + S   +V+  
Sbjct: 508 AESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSA 567

Query: 371 CSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           CS    +  G +      K + +    +  T +VD+ A+ G+L+ A  +++    +    
Sbjct: 568 CSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 627

Query: 430 -FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            F A L G       D  ++++    +++  + PD  ++  L+S
Sbjct: 628 CFGAFLHGCGMHSRFDLGEIVI----KKMLDLHPDDASYYVLVS 667



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 3/212 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G+L+LG+++H   +K G   DT  AN L+++YAK  +   A+ +F+    +  + W S+I
Sbjct: 369 GNLELGRSIHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSII 427

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF- 190
            G+  +G     L +   M       N  T + +  AC+ L     G  +HA+++K GF 
Sbjct: 428 SGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFL 487

Query: 191 -ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             ++V VGT+L+  Y   G    A  +F  +  K+    + MI  Y K G+++ +  +F 
Sbjct: 488 ASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFE 547

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            +L    +PN+ TFT+V+S C     V EGK+
Sbjct: 548 EMLKKQQKPNESTFTSVLSACSHTGMVNEGKK 579


>gi|110741296|dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
          Length = 727

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 185/593 (31%), Positives = 308/593 (51%), Gaps = 25/593 (4%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGF--ENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           + + +AC+   + + G  +H   +   +    NV +   LI+MY   G    A  VF  +
Sbjct: 63  AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTM 122

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             ++V     +I  Y +AG  +  F +F  +LS  F PN++T ++V++ C      E GK
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPGK 177

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYV 337
           Q+HGLA+K G+   I V NA+++MYG+      + EA  +F+AI  +NL++W ++I+ + 
Sbjct: 178 QVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQ 237

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL------ELGLQLHGFAIKHG 391
               G KAI  F+     G+  D + L  +       S+L      +  LQLH   +K G
Sbjct: 238 CCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSG 297

Query: 392 YLSDVRLGTALVDIYAKGGD--LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            ++   + TAL+ +Y++  +      ++ ++   C+    +N I++ F      D E  +
Sbjct: 298 LVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA---VYDPERAI 354

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
            LF Q R   + PD  TFS +L   A         S+HA  IK G+ AD ++ N+LI  Y
Sbjct: 355 HLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAY 414

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           AKCGS+D   ++F  +  RD+VSWN+ML AY+LHG     L +F++M      PD  + +
Sbjct: 415 AKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFI 471

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
            +L AC ++G  E G+ +F  + +     P L H+AC++D+L RA R +EA  +I   P 
Sbjct: 472 ALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPM 531

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDL-EPKDAGSFILVSNMYAGQGMLDEAAK 688
               ++W  L+   +   N++   LA+ +L +L EP ++ S+I +SN+Y  +G  +EA  
Sbjct: 532 DPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANL 591

Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
               M   R+ KE   SW EI +K+H F + G+  P+ E +Y +L  L   +K
Sbjct: 592 SIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLK 644



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 217/479 (45%), Gaps = 32/479 (6%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
           SQN    AN LIN+YAK   +  A+++FD M  R+ ++WT+LI GY+  G+ +    +  
Sbjct: 93  SQN-VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151

Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY--FH 206
            M  S    NE T S +L +C        G+Q+H  A+K G   +++V  ++ISMY   H
Sbjct: 152 SML-SHCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCH 206

Query: 207 SGCFR-EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
            G    EA  VF  + +K++   N MI  +      + A  VF+ + S     +  T  N
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266

Query: 266 VISVCYENLGVEEGK------QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
           + S  Y++  +   +      QLH L VK G+V +  V  A++ +Y +  M E+    + 
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYK 324

Query: 320 AISE----RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
              E    R++++W  +I+ +       +AI+ F +     +  D    ++V+  C+   
Sbjct: 325 LFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
                L +H   IK G+L+D  L  +L+  YAK G L     + D    +    +N++L 
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLK 443

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKTG 494
            +   +    + ++ +F +     + PD  TF  LLS  +    +  G R   +   K  
Sbjct: 444 AY--SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPE 498

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LGKGA 549
               +     +I M ++      A ++ K +  D D V W A+L +   HG   LGK A
Sbjct: 499 TLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLA 557



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 60  DW---PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           DW     ++K   G    +   ++HA ++K G   DT   N+LI+ YAK   LD+  ++F
Sbjct: 368 DWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVF 427

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGI 146
           D M  R  ++W S++K Y   G  +S+L +
Sbjct: 428 DDMDSRDVVSWNSMLKAYSLHGQVDSILPV 457


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 180/577 (31%), Positives = 300/577 (51%), Gaps = 4/577 (0%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S +L  CS  +    G  +HA  +K+G +++VF+   +++MY   G    A  VF  +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             K++   + MI  Y++AGE +MA  ++  +      PN+Y F +VIS C     V  G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++H  ++KFG      V N++++MY K     +A  +F    E N +S+ ALI+G+V + 
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              + +  F      G+  D      V+  C+   NL+ G +LH   +K    S   +G 
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
            ++ +Y++   ++ A         K    +N +++       D  + + V         +
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAA-CSHCDDHAKGLRVFKHMTEETNV 300

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
            PD  TF+  L+  A  A +  G+ +HA+ ++T    D+ VGNAL+ MYAKCG I  A+ 
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           IF  +   ++VSWN +++ +  HGLG+ A+ LFE+M   G  PD ++ +G+L AC ++GL
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            + G   FN +E+ YG+ P +EHF+C++D+LGRAGRL+EA   +   PF   P++  +L+
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480

Query: 641 SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
           S S+L  +       +K LL L+P     ++L+SN+YA  GM D  A+ R  +    L K
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           E G S IE++  +  F      H   +EI   L  L+
Sbjct: 541 EPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLS 577



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 235/475 (49%), Gaps = 10/475 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G ++HA +LK+G+Q+D F +N+++N+YAK      A+++FD M  ++ ++W+++I G
Sbjct: 19  LRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISG 78

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G+ +  + +   M+      NE+  + ++ AC+ L     G++IH+ ++K G+E+ 
Sbjct: 79  YDQAGEPQMAIDLYSQMFLVP---NEYVFASVISACASLSAVTLGQKIHSRSLKFGYESI 135

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            FV  SLISMY       +A +VF      +    N +I  + +  + E     F  +  
Sbjct: 136 SFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQ 195

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+ + F  V+ +C     ++ G +LH   VK  +     +GN I+TMY +  + +E
Sbjct: 196 QGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQE 255

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCS 372
           AE+ F  I E+++ISW  LI+         K +  F     +  +  D     + +  C+
Sbjct: 256 AEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACA 315

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             +++  G Q+H   ++     D+ +G ALV++YAK G +  A  +           +N 
Sbjct: 316 GLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNT 375

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I++GF        E  + LF Q   +G+ PD VTF  LL+ + + A LV    L+  S++
Sbjct: 376 IIAGFGNHGLG--ERAVELFEQMNASGIRPDSVTFIGLLT-ACNHAGLVDKGQLYFNSME 432

Query: 493 TGY--AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
             Y  A D+   + LI M  + G ++ A +  +      D V   ++LSA  LHG
Sbjct: 433 ETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHG 487



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 122/253 (48%), Gaps = 6/253 (2%)

Query: 67  ISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           I   + +LK G  +H   +K    +  F  N +I +Y++ N +  A+K F  +  +  I+
Sbjct: 211 ICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVIS 270

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEE---KFNEHTCSVILEACSLLEDRIFGEQIHA 183
           W +LI       D+    G+    + +EE   + ++ T +  L AC+ L     G+QIHA
Sbjct: 271 WNTLIAACSHCDDHAK--GLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHA 328

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +++    ++ VG +L++MY   GC   A ++F  + + ++   N +I  +   G  E 
Sbjct: 329 HLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGER 388

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVGNAIV 302
           A  +F  + +S   P+  TF  +++ C     V++G+   + +   +G+  +I   + ++
Sbjct: 389 AVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLI 448

Query: 303 TMYGKHGMSEEAE 315
            M G+ G   EAE
Sbjct: 449 DMLGRAGRLNEAE 461



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 9/158 (5%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G   +  G+ +HA L+++    D    N L+N+YAK   +  A  +F  M+  + ++W +
Sbjct: 316 GLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNT 375

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL--LEDR---IFGEQIHAF 184
           +I G+ + G  E  + +   M  S  + +  T   +L AC+   L D+    F      +
Sbjct: 376 IIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETY 435

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
            I    E+     + LI M   +G   EAE   R   +
Sbjct: 436 GIAPDIEH----FSCLIDMLGRAGRLNEAEEYMRKFPF 469


>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 192/604 (31%), Positives = 311/604 (51%), Gaps = 25/604 (4%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKS--------GFENNVFVGTSLISMYFHSG 208
            N    + +L  C    +   G  IHA  IK            N +F+  SL+SMY   G
Sbjct: 32  LNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCG 91

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD---FEPNDYTFTN 265
            FR A NVF  +  +D    N MI  + + G+ + +F  F  +  S+      +  T T 
Sbjct: 92  EFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTT 151

Query: 266 VISVCYE-NLGVEEG--KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           ++S C    LG+     + +HGL    G  REI+VGNA++T Y K     +  ++FD + 
Sbjct: 152 MLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMI 211

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC--LATVIDGCSVCSNLEL- 379
           ERN+++WTA+ISG  ++     ++  F +      CC S    + T +     CS L++ 
Sbjct: 212 ERNVVTWTAVISGLAQNEFYEDSLRLFAQMR----CCGSVSPNVLTYLSSLMACSGLQVL 267

Query: 380 --GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
             G ++HG   K G  SD+ + +AL+D+Y+K G L +A  + +            IL  F
Sbjct: 268 RDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAF 327

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
            +     EE+ + +F++    GME D    S +L +      L  G+ +H+  IK  +  
Sbjct: 328 AQN--GFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCE 385

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           +  VGN L+ MY+KCG +  +  +F  ++ ++ VSWN++++A+A HG G  AL  +EEM+
Sbjct: 386 NPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMR 445

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
            EG AP D++ L +L AC ++GL E G+ L   +   +G+ P  EH+AC+VD+LGRAG L
Sbjct: 446 VEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHL 505

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
           +EA   I   P     L+W+ L+    +  +S+    A+ RL    P     ++L++N+Y
Sbjct: 506 NEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIY 565

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           + +G   E A     M ++ ++KE G SWIEI+ K++ FV   K HPE++ I+  L  L 
Sbjct: 566 SSEGNWKERASSIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGLL 625

Query: 738 DEMK 741
             +K
Sbjct: 626 KHLK 629



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 242/495 (48%), Gaps = 31/495 (6%)

Query: 73  DLKLGQAVHAFLLKS-------GSQ-NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +L LG ++HA ++K        GSQ N  F  N+L+++Y+K      A  +FD M VR  
Sbjct: 49  NLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDT 108

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEE---KFNEHTCSVILEACSLLEDRI---FG 178
           ++W ++I G+L +GD+++       M  S     +F++ T + +L  C  L   I     
Sbjct: 109 VSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVT 168

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           + IH      GFE  + VG +LI+ YF   CF +   VF  +  ++V     +I    + 
Sbjct: 169 QMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQN 228

Query: 239 GESEMAFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
              E +  +F  +       PN  T+ + +  C     + +G+++HGL  K G+  ++ +
Sbjct: 229 EFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCI 288

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            +A++ +Y K G  + A ++F++  E + +S T ++  + ++G   +AI  F + + LG+
Sbjct: 289 ESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGM 348

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D++ ++ V+    V + L LG Q+H   IK  +  +  +G  LV++Y+K GDL  + +
Sbjct: 349 EVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLL 408

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +    + K +  +N++++ F      D    +  + + R+ G+ P  VTF  LL   +  
Sbjct: 409 VFYQMTQKNSVSWNSVIAAFARH--GDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHA 466

Query: 478 ACLVRGRSL-------HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-D 529
             + +G  L       H  S ++ + A V      + M  + G ++ A +  +G+ +   
Sbjct: 467 GLVEKGMELLESMTNDHGISPRSEHYACV------VDMLGRAGHLNEAKKFIEGLPEHGG 520

Query: 530 IVSWNAMLSAYALHG 544
           ++ W A+L A ++HG
Sbjct: 521 VLVWQALLGACSIHG 535



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 10/380 (2%)

Query: 52  SERTLLFNDWPQLVKISIGSGDLKLG------QAVHAFLLKSGSQNDTFEANNLINLYAK 105
           S R     D   L  +  G   L+LG      Q +H  +   G + +    N LI  Y K
Sbjct: 137 SNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFK 196

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
                  +K+FD M+ R+ +TWT++I G   +  YE  L +   M R     + +  + +
Sbjct: 197 CECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQM-RCCGSVSPNVLTYL 255

Query: 166 --LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
             L ACS L+    G++IH    K G ++++ + ++L+ +Y   G    A  +F      
Sbjct: 256 SSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEEL 315

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           D   +  +++ + + G  E A  +F  +++   E +    + V+ V      +  GKQ+H
Sbjct: 316 DGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIH 375

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
            L +K        VGN +V MY K G   ++  +F  ++++N +SW ++I+ + R G G 
Sbjct: 376 SLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGF 435

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTAL 402
           KA+  + E    G+        +++  CS    +E G++ L      HG          +
Sbjct: 436 KALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACV 495

Query: 403 VDIYAKGGDLKSARMLLDGF 422
           VD+  + G L  A+  ++G 
Sbjct: 496 VDMLGRAGHLNEAKKFIEGL 515


>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
 gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
 gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 745

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 185/593 (31%), Positives = 308/593 (51%), Gaps = 25/593 (4%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGF--ENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           + + +AC+   + + G  +H   +   +    NV +   LI+MY   G    A  VF  +
Sbjct: 63  AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTM 122

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             ++V     +I  Y +AG  +  F +F  +LS  F PN++T ++V++ C      E GK
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPGK 177

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYV 337
           Q+HGLA+K G+   I V NA+++MYG+      + EA  +F+AI  +NL++W ++I+ + 
Sbjct: 178 QVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQ 237

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL------ELGLQLHGFAIKHG 391
               G KAI  F+     G+  D + L  +       S+L      +  LQLH   +K G
Sbjct: 238 CCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSG 297

Query: 392 YLSDVRLGTALVDIYAKGGD--LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            ++   + TAL+ +Y++  +      ++ ++   C+    +N I++ F      D E  +
Sbjct: 298 LVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA---VYDPERAI 354

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
            LF Q R   + PD  TFS +L   A         S+HA  IK G+ AD ++ N+LI  Y
Sbjct: 355 HLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAY 414

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           AKCGS+D   ++F  +  RD+VSWN+ML AY+LHG     L +F++M      PD  + +
Sbjct: 415 AKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFI 471

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
            +L AC ++G  E G+ +F  + +     P L H+AC++D+L RA R +EA  +I   P 
Sbjct: 472 ALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPM 531

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDL-EPKDAGSFILVSNMYAGQGMLDEAAK 688
               ++W  L+   +   N++   LA+ +L +L EP ++ S+I +SN+Y  +G  +EA  
Sbjct: 532 DPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANL 591

Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
               M   R+ KE   SW EI +K+H F + G+  P+ E +Y +L  L   +K
Sbjct: 592 SIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLK 644



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 220/486 (45%), Gaps = 32/486 (6%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
           SQN    AN LIN+YAK   +  A+++FD M  R+ ++WT+LI GY+  G+ +    +  
Sbjct: 93  SQN-VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151

Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY--FH 206
            M  S    NE T S +L +C        G+Q+H  A+K G   +++V  ++ISMY   H
Sbjct: 152 SML-SHCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCH 206

Query: 207 SGCFR-EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
            G    EA  VF  + +K++   N MI  +      + A  VF+ + S     +  T  N
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266

Query: 266 VISVCYENLGVEEGK------QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
           + S  Y++  +   +      QLH L VK G+V +  V  A++ +Y +  M E+    + 
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYK 324

Query: 320 AISE----RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
              E    R++++W  +I+ +       +AI+ F +     +  D    ++V+  C+   
Sbjct: 325 LFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
                L +H   IK G+L+D  L  +L+  YAK G L     + D    +    +N++L 
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLK 443

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKTG 494
            +   +    + ++ +F +     + PD  TF  LLS  +    +  G R   +   K  
Sbjct: 444 AY--SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPE 498

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LGKGAL 550
               +     +I M ++      A ++ K +  D D V W A+L +   HG   LGK A 
Sbjct: 499 TLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAA 558

Query: 551 LLFEEM 556
              +E+
Sbjct: 559 DKLKEL 564



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 60  DW---PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           DW     ++K   G    +   ++HA ++K G   DT   N+LI+ YAK   LD+  ++F
Sbjct: 368 DWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVF 427

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGI 146
           D M  R  ++W S++K Y   G  +S+L +
Sbjct: 428 DDMDSRDVVSWNSMLKAYSLHGQVDSILPV 457


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 198/652 (30%), Positives = 335/652 (51%), Gaps = 30/652 (4%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D  + N  I+ + +    D A  +F+ M  RS++++ ++I GYL +    S   +A +++
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRN----SKFNLARNLF 103

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
               + +  + +V+L     + +   G+    F +    E +V    SL+S Y  +G   
Sbjct: 104 DQMPERDLFSWNVMLTG--YVRNCRLGDARRLFDLMP--EKDVVSWNSLLSGYAQNGYVD 159

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           EA  VF  +  K+    N ++  Y   G  E A  +F     SD++        +IS   
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES--KSDWD--------LISWNC 209

Query: 272 ENLGVEEGKQLHGLAVKFG--VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
              G    K+L      F    VR+    N +++ Y + G   +A R+FD    R++ +W
Sbjct: 210 LMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTW 269

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           TA++SGYV++G   +A   F E  +     +      +I G      +++  +L     +
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIAREL----FE 321

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
                ++     ++  Y + GD+  AR   D    +    + AI++G+ +  +   E+ +
Sbjct: 322 SMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQ--SGHYEEAL 379

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
            +F + +  G   +  TF   LS  A  A L  G+ +H  ++K GY     VGNAL+ MY
Sbjct: 380 NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
            KCGSID A   F+GI ++D+VSWN ML+ YA HG G+ AL +FE MK  G  PD+I+++
Sbjct: 440 FKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMV 499

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
           GVL AC ++GL + G   F  + + YG+ P  +H+ CM+DLLGRAGRL EA +LI + PF
Sbjct: 500 GVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
                 W  L+  S++  N++    A++ +  +EP+++G ++L+SN+YA  G   +A K+
Sbjct: 560 QPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKM 619

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           R+ M D+ + K  G SW+E+ +K+H F      HPE E IY+ L+ L+ +M+
Sbjct: 620 RSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 240/538 (44%), Gaps = 45/538 (8%)

Query: 51  CSERTLLFNDWPQLVKISIG---SGDLKLGQ-AVHAFLLKSGSQNDTFEANNLINLYAKF 106
           C     +FN  P+   +S     SG L+  +  +   L     + D F  N ++  Y + 
Sbjct: 65  CDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRN 124

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSV- 164
            RL  A++LFD M  +  ++W SL+ GY  +G  +    +  +M  ++   +N    +  
Sbjct: 125 CRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYV 184

Query: 165 ----ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG-----------------TSLISM 203
               I EAC L E +   + I    +  GF     +G                  ++IS 
Sbjct: 185 HNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISG 244

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y   G   +A  +F     +DV     M+  Y + G  + A   F  +     E N+ ++
Sbjct: 245 YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSY 300

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
             +I+   +   ++  ++L     +    R IS  N ++T YG+ G   +A + FD + +
Sbjct: 301 NAMIAGYVQTKKMDIAREL----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQ 356

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           R+ +SW A+I+GY +SGH  +A+N F+E    G   + +     +  C+  + LELG Q+
Sbjct: 357 RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQI 416

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           HG A+K GY +   +G AL+ +Y K G +  A    +G   K    +N +L+G+      
Sbjct: 417 HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFG 476

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
            +   + +F   + AG++PD +T   +LS  +    L RG + + YS+   Y       +
Sbjct: 477 RQ--ALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRG-TEYFYSMTKDYGVIPTSKH 533

Query: 504 --ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LG-KGALLLFE 554
              +I +  + G ++ A  + + +       SW A+L A  +HG   LG K A ++F+
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFK 591


>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
          Length = 711

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 190/638 (29%), Positives = 329/638 (51%), Gaps = 11/638 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGMLVRSAITWTSLIKGYL 135
           + +HA LL  G    T  A  L+  YA+     L  A ++FDGM  R++  W ++IKG +
Sbjct: 77  RRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVIKGLV 136

Query: 136 DDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLL----EDRIFGEQIHAFAIKSGF 190
           D G +   L    DM R      +  T   +L+AC+ L    + R   E +     +   
Sbjct: 137 DAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVETDIARGIA 196

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + NVFV  +L+ M+   GC  EA N+F  +  +D+     MI    + G+      +   
Sbjct: 197 KGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKR 256

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + S  F P+   F  VI  C +   +  G  LHG AVK GV  +I V NA+V MY K   
Sbjct: 257 MKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCAR 316

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            + A  +F +I  +++ SW+ +I+G+ ++     +++ F E +  GI  +S+ +A+++  
Sbjct: 317 LDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPS 376

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
            S    L  G ++H F++++       L +AL+D Y + G ++ A+++ +          
Sbjct: 377 ISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVL 436

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           N+++ G++  +  D E  + L       G+ PD VT   +L L    + L++G+ LHAY+
Sbjct: 437 NSMIRGYV--VNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYA 494

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           I+   ++   V NAL  MY KCG ++ A +IF  +++R+ V++N ++S+   HG    A 
Sbjct: 495 IRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAF 554

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
           +LF+ MKR+G +PD ++ + +L  C + GL + G+C ++ + + Y + P  EH++C+VDL
Sbjct: 555 ILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVDL 614

Query: 611 LGRAGRLSEAMNLI-NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
             R+G+L +A + I N     E  +L   L+S  +       + L ++R+ +  P D G 
Sbjct: 615 YSRSGKLDDAWSFIANLQEVPEIDVLG-CLLSACRDHHRMDIAELVAERIFEQNPNDPGY 673

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
            IL+SN+YA  GM  E  ++RT + +  L K  G S I
Sbjct: 674 HILLSNVYASAGMWSEVTRIRTMIEERSLKKRTGNSLI 711



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 173/344 (50%), Gaps = 1/344 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L+ G A+H + +K G  +D    N L+++Y K  RLD+A  LF  +  +   +W+++I 
Sbjct: 281 ELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIA 340

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G+  +  Y   + +  +M  S  K N  T + IL + S L    +G++IH F++++  E+
Sbjct: 341 GHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEH 400

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           + F+ ++LI  Y   G  R+A+ VF      D+  +N MI  Y    +SE A  +   LL
Sbjct: 401 SEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALL 460

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                P+  T  +V+ +C +   + +GK+LH  A++  +    SV NA+  MY K G  E
Sbjct: 461 KEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLE 520

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A ++F  ++ERN +++  LIS   + GH  +A   F      G+  D      ++  CS
Sbjct: 521 IANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALLSCCS 580

Query: 373 VCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSA 415
               ++ GL  +   ++ +    D    + +VD+Y++ G L  A
Sbjct: 581 HGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDA 624



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/472 (21%), Positives = 225/472 (47%), Gaps = 7/472 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVH----AFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           +P ++K     G+++ G+ V       + +  ++ + F    L++++AK   L  A+ +F
Sbjct: 164 YPPVLKACAALGEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMF 223

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           + M VR   +WT++I G +  GD+  V+ +   M     + +    + ++ AC  +++  
Sbjct: 224 ESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELR 283

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G  +H +A+K G  +++ V  +L+ MY        A ++F  + +KDV   + +I  ++
Sbjct: 284 TGMALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHS 343

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           +     ++  +F  +++S  +PN  T  +++    E   +  GK++H  +++  +     
Sbjct: 344 QNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEF 403

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           + +A++  Y + G   +A+ +F+   + +L+   ++I GYV +     A+      L  G
Sbjct: 404 LASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEG 463

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D   + +V+  C+  S L  G +LH +AI+H   S   +  AL D+Y K G L+ A 
Sbjct: 464 LRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIAN 523

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            +    + + T  +N ++S   +    D+    +LF   +  G+ PD VTF  LLS  + 
Sbjct: 524 KIFLLMTERNTVTYNTLISSLGKHGHADQ--AFILFDLMKRDGVSPDKVTFVALLSCCSH 581

Query: 477 QACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
              + +G   +   ++      D    + ++ +Y++ G +D A+     + +
Sbjct: 582 GGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIANLQE 633



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC--GSIDGAFQIFKGISD 527
           LL L ++ A L   R LHA  +  GY    ++   L+  YA+   G +  A ++F G+  
Sbjct: 64  LLRLQSAPA-LTEVRRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPT 122

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGIC 586
           R+  +WNA++      G    AL  + +M R+G    D  +   VL+AC   G  E G  
Sbjct: 123 RNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRK 182

Query: 587 LFNEIEQ--IYGLRPILEHFAC-MVDLLGRAGRLSEAMNLINS 626
           +   +E     G+        C +VD+  + G L EA N+  S
Sbjct: 183 VQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFES 225


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 173/524 (33%), Positives = 287/524 (54%), Gaps = 13/524 (2%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N +I E  ++G+S  A   F  +     +PN  TF   I  C   L +  G+Q H  A+ 
Sbjct: 121 NSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALI 180

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
           FG   ++ V +A+V MY K G   +A  +FD IS RN++SWT++I+GYV++    +A+  
Sbjct: 181 FGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLL 240

Query: 349 FLEFL--------DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
           F EFL        D  +C D   + +V+  CS  S   +   +HGF IK G+  D+ +  
Sbjct: 241 FKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVEN 300

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG- 459
            L+D YAK G+L  +R + DG + +    +N+I++ + +     E   M +F +    G 
Sbjct: 301 TLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES--MEIFHRMVKDGE 358

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           +  + VT S +L   A       G+ +H   IK G  ++V VG ++I MY KCG ++ A 
Sbjct: 359 INYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMAR 418

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           + F  + ++++ SW+AM++ Y +HG  K AL +F EM   G  P+ I+ + VL AC ++G
Sbjct: 419 KAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 478

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           L E G   F  +   + + P +EH+ CMVDLLGRAG L EA +LI         ++W  L
Sbjct: 479 LLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGAL 538

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           +   ++  N     +++++L +L+PK+ G ++L+SN+YA  G  ++  ++R  M +  L 
Sbjct: 539 LGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLV 598

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK 743
           K  G S ++I  ++H F+   ++HP+ E+IY  L+ L+  MKL+
Sbjct: 599 KPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLS--MKLQ 640



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 180/369 (48%), Gaps = 22/369 (5%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL  G+  H   L  G + D F ++ L+++Y+K   L  A+ LFD +  R+ ++WTS+I 
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSV---------ILEACSLLEDRIFGEQIHA 183
           GY+ + D    L +    +  EE  +E    V         +L ACS + ++   E +H 
Sbjct: 227 GYVQNDDAHRAL-LLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
           F IK GFE ++ V  +L+  Y   G    +  VF G+A +DV   N +I  Y + G S  
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345

Query: 244 AFHVFVHLLSSDFEP--NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           +  +F H +  D E   N  T + V+  C  +     GK +H   +K G+   + VG +I
Sbjct: 346 SMEIF-HRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSI 404

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K G  E A + FD + E+N+ SW+A+++GY   GH  +A+  F E    G+  + 
Sbjct: 405 IDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNY 464

Query: 362 SCLATVIDGCSVCSNLELGLQLHGF-AIKHGYLSDVRLGT----ALVDIYAKGGDLKSAR 416
               +V+  CS    LE G   H F A+ H +  DV  G      +VD+  + G LK A 
Sbjct: 465 ITFVSVLAACSHAGLLEEG--WHWFKAMSHEF--DVEPGVEHYGCMVDLLGRAGYLKEAF 520

Query: 417 MLLDGFSCK 425
            L+ G   +
Sbjct: 521 DLIKGMKLR 529



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 210/438 (47%), Gaps = 25/438 (5%)

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           +  +W S+I      GD    L     M +   K N  T    +++CS L D   G Q H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             A+  GFE ++FV ++L+ MY   G  R+A  +F  ++++++     MI  Y +  ++ 
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235

Query: 243 MAFHVFVHLL--------SSDFEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVV 292
            A  +F   L          +   +     +V+S C       + EG  +HG  +K G  
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG--VHGFLIKRGFE 293

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            ++ V N ++  Y K G    + R+FD ++ER++ISW ++I+ Y ++G   +++  F   
Sbjct: 294 GDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRM 353

Query: 353 LDLG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
           +  G I  ++  L+ V+  C+   +  LG  +H   IK G  S+V +GT+++D+Y K G 
Sbjct: 354 VKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGK 413

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           ++ AR   D    K    ++A+++G+   +    ++ + +F +  +AG++P+ +TF  +L
Sbjct: 414 VEMARKAFDRMREKNVKSWSAMVAGY--GMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 471

Query: 472 SLSASQACLVRGRSL-----HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           +  +    L  G        H + ++ G    V     ++ +  + G +  AF + KG+ 
Sbjct: 472 AACSHAGLLEEGWHWFKAMSHEFDVEPG----VEHYGCMVDLLGRAGYLKEAFDLIKGMK 527

Query: 527 DR-DIVSWNAMLSAYALH 543
            R D V W A+L A  +H
Sbjct: 528 LRPDFVVWGALLGACRMH 545



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 168/311 (54%), Gaps = 16/311 (5%)

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + + N+ SW ++I+   RSG   +A+  F     L +  + S     I  CS   +L  G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q H  A+  G+  D+ + +ALVD+Y+K G+L+ AR L D  S +    + ++++G+++ 
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231

Query: 441 IADDEEDVMVLFSQQRL--AGME------PDPVTFSRLLSLSA--SQACLVRGRSLHAYS 490
             DD    ++LF +  +  +G E       DP+    +LS  +  S+  +  G  +H + 
Sbjct: 232 --DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG--VHGFL 287

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK G+  D+ V N L+  YAKCG +  + ++F G+++RD++SWN++++ YA +G+   ++
Sbjct: 288 IKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESM 347

Query: 551 LLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
            +F  M ++G    + +++  VL AC +SG    G C+ +++ ++ GL   +     ++D
Sbjct: 348 EIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM-GLESNVFVGTSIID 406

Query: 610 LLGRAGRLSEA 620
           +  + G++  A
Sbjct: 407 MYCKCGKVEMA 417



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 3/261 (1%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           + + VH FL+K G + D    N L++ YAK   L V++++FDGM  R  I+W S+I  Y 
Sbjct: 279 ITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYA 338

Query: 136 DDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
            +G     + I   M +  E  +N  T S +L AC+    +  G+ IH   IK G E+NV
Sbjct: 339 QNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 398

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           FVGTS+I MY   G    A   F  +  K+V+  + M+  Y   G ++ A  VF  +  +
Sbjct: 399 FVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMA 458

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
             +PN  TF +V++ C     +EEG      ++ +F V   +     +V + G+ G  +E
Sbjct: 459 GVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKE 518

Query: 314 AERMFDAISER-NLISWTALI 333
           A  +   +  R + + W AL+
Sbjct: 519 AFDLIKGMKLRPDFVVWGALL 539



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 84/158 (53%), Gaps = 9/158 (5%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG  +LG+ +H  ++K G +++ F   ++I++Y K  ++++A+K FD M  ++  +W+++
Sbjct: 376 SGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 435

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFA 185
           + GY   G  +  L +  +M  +  K N  T   +L ACS   LLE+    F    H F 
Sbjct: 436 VAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 495

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
           ++ G E+       ++ +   +G  +EA ++ +G+  +
Sbjct: 496 VEPGVEHY----GCMVDLLGRAGYLKEAFDLIKGMKLR 529


>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 608

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 193/591 (32%), Positives = 310/591 (52%), Gaps = 13/591 (2%)

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           SA T  S I      G     + I    + SE     +  + +L+ C  +   I G Q H
Sbjct: 24  SAPTKQSRILELCKLGQLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVFSFIHGLQFH 83

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGC-FREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           A  +KSG E +  VG SL+S+YF  G   RE   VF G+  KD      M+  Y  + E 
Sbjct: 84  AHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASKEH 143

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A  VFV ++S   +PN +T ++ +  C+E   V  G+  HG+ +  G      + + +
Sbjct: 144 VKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTL 203

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCD 360
             MYG +    +A R+FD + E ++I WTA++S + ++    +A+  F       G+  D
Sbjct: 204 AYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPD 263

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            S   TV+  C     L+ G ++HG  I +G  S+V + ++L+D+Y K G ++ AR + +
Sbjct: 264 GSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFN 323

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
           G   K    ++A+L G+ +    + E  + +F +      E D   F  +L   A  A +
Sbjct: 324 GMPRKNIVSWSALLGGYCQN--GEHEKAIEMFREME----EKDLYCFGTVLKACAGLAAV 377

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+ +H   ++ G   +VIV +ALI +Y K G ID A +++  +S R++++WNAMLSA 
Sbjct: 378 RLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSAL 437

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
           A +G G+ A+  F +M ++G  PD IS + VL AC ++GL E G   F  + + YG++P 
Sbjct: 438 AQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPG 497

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA---SK 657
            EH++CM+DLLGRAG   EA NL++ +       LW  L  +    AN+  S +A   +K
Sbjct: 498 TEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVL--LGPCAANTDASSIAERIAK 555

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           R+++LEPK   S++L+SNMY   G   +A K+R  M    ++K  G SWI+
Sbjct: 556 RMMELEPKYHMSYVLLSNMYKAIGRHGDALKIRKLMVRRGVAKTVGQSWID 606



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 236/486 (48%), Gaps = 24/486 (4%)

Query: 27  VPINTFS-PNPKSQVAYLCSI----------SSVSCSERTLLFNDWPQLVKISIGSGDLK 75
            P N+ S P  +S++  LC +          +S   SE +   N +  L++         
Sbjct: 18  TPSNSSSAPTKQSRILELCKLGQLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVFSFI 77

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR-LDVAQKLFDGMLVRSAITWTSLIKGY 134
            G   HA ++KSG + D    N+L++LY K    +   +++FDGM V+ AI+WTS++ GY
Sbjct: 78  HGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGY 137

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           +   ++   L +  +M     + N+ T S  ++AC  L +   G   H   I  GFE N 
Sbjct: 138 VASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFEWNH 197

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL-LS 253
            + ++L  MY  +    +A  VF  +   DV C   ++  ++K    E A  +F  +   
Sbjct: 198 VISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRG 257

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+  TF  V++ C     +++GK++HG  +  G+   + V ++++ MYGK G   E
Sbjct: 258 KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVRE 317

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++F+ +  +N++SW+AL+ GY ++G   KAI  F E  +     D  C  TV+  C+ 
Sbjct: 318 ARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEK----DLYCFGTVLKACAG 373

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + + LG ++HG  ++ G   +V + +AL+D+Y K G +  A  +    S +    +NA+
Sbjct: 374 LAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAM 433

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA----- 488
           LS   +      E+ +  F+     G++PD ++F  +L+       +  GR+  A     
Sbjct: 434 LSALAQN--GRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKS 491

Query: 489 YSIKTG 494
           Y IK G
Sbjct: 492 YGIKPG 497


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 198/631 (31%), Positives = 323/631 (51%), Gaps = 8/631 (1%)

Query: 81  HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
           H  L  +G   D   A  L++LY  F     A+ +FD +       W  +++ Y  + + 
Sbjct: 64  HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123

Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-SGFENNVFVGTS 199
             V+ +   + +   ++++   S  L+AC+ L+D   G++IH   +K   F+N V  G  
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-- 181

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+ MY   G  + A  VF  +  ++V C   MI  Y K    E    +F  +  ++   N
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
           +YT+  +I  C +   + +GK  HG  VK G+     +  +++ MY K G    A R+F+
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
             S  +L+ WTA+I GY  +G   +A++ F +   + I  +   +A+V+ GC +  NLEL
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           G  +HG +IK G + D  +  ALV +YAK    + A+ + +  S K    +N+I+SGF +
Sbjct: 362 GRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA-- 497
             +  E   + LF +     + P+ VT + L S  AS   L  G SLHAYS+K G+ A  
Sbjct: 421 NGSIHE--ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASS 478

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
            V VG AL+  YAKCG    A  IF  I +++ ++W+AM+  Y   G   G+L LFEEM 
Sbjct: 479 SVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEML 538

Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
           ++   P++ +   +L AC ++G+   G   F+ + + Y   P  +H+ CMVD+L RAG L
Sbjct: 539 KKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGEL 598

Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
            +A+++I   P       +   +    + +      +  K++LDL P DA  ++LVSN+Y
Sbjct: 599 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLY 658

Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           A  G  ++A +VR  M    LSK AG S +E
Sbjct: 659 ASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 203/414 (49%), Gaps = 7/414 (1%)

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
           C ++L  C+ ++      Q H     +G   ++ + T L+S+Y   G  ++A  VF  + 
Sbjct: 47  CFLLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIP 103

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
             D      M+  Y    ES     ++  L+   F  +D  F+  +  C E   ++ GK+
Sbjct: 104 EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK 163

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +H   VK      + V   ++ MY K G  + A ++F+ I+ RN++ WT++I+GYV++  
Sbjct: 164 IHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             + +  F    +  +  +     T+I  C+  S L  G   HG  +K G      L T+
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           L+D+Y K GD+ +AR + +  S      + A++ G+    + +E   + LF + +   ++
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE--ALSLFQKMKGVEIK 340

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
           P+ VT + +LS       L  GRS+H  SIK G   D  V NAL+ MYAKC     A  +
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYV 399

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           F+  S++DIV+WN+++S ++ +G    AL LF  M  E   P+ +++  +  AC
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 187/404 (46%), Gaps = 11/404 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+  H  L+KSG +  +    +L+++Y K   +  A+++F+       + WT++I G
Sbjct: 258 LHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVG 317

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-FEN 192
           Y  +G     L +   M   E K N  T + +L  C L+E+   G  +H  +IK G ++ 
Sbjct: 318 YTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT 377

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N  V  +L+ MY      R+A+ VF   + KD+   N +I  +++ G    A  +F  + 
Sbjct: 378 N--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV--REISVGNAIVTMYGKHGM 310
           S    PN  T  ++ S C     +  G  LH  +VK G +    + VG A++  Y K G 
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            + A  +FD I E+N I+W+A+I GY + G    ++  F E L      + S   +++  
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555

Query: 371 CSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           C     +  G +      K + +    +  T +VD+ A+ G+L+ A  +++    +    
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 615

Query: 430 -FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            F A L G       D  ++++    +++  + PD  ++  L+S
Sbjct: 616 CFGAFLHGCGMHSRFDLGEIVI----KKMLDLHPDDASYYVLVS 655


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 198/652 (30%), Positives = 335/652 (51%), Gaps = 30/652 (4%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D  + N  I+ + +    D A  +F+ M  RS++++ ++I GYL +    S   +A +++
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRN----SKFNLARNLF 103

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
               + +  + +V+L     + +   G+    F +    E +V    SL+S Y  +G   
Sbjct: 104 DQMPERDLFSWNVMLTG--YVRNCRLGDARRLFDLMP--EKDVVSWNSLLSGYAQNGYVD 159

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
           EA  VF  +  K+    N ++  Y   G  E A  +F     SD++        +IS   
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES--KSDWD--------LISWNC 209

Query: 272 ENLGVEEGKQLHGLAVKFG--VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
              G    K+L      F    VR+    N +++ Y + G   +A R+FD    R++ +W
Sbjct: 210 LMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTW 269

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           TA++SGYV++G   +A   F E  +     +      +I G      +++  +L     +
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIAREL----FE 321

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
                ++     ++  Y + GD+  AR   D    +    + AI++G+ +  +   E+ +
Sbjct: 322 SMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQ--SGHYEEAL 379

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
            +F + +  G   +  TF   LS  A  A L  G+ +H  ++K GY     VGNAL+ MY
Sbjct: 380 NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
            KCGSID A   F+GI ++D+VSWN ML+ YA HG G+ AL +FE MK  G  PD+I+++
Sbjct: 440 FKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMV 499

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
           GVL AC ++GL + G   F  + + YG+ P  +H+ CM+DLLGRAGRL EA +LI + PF
Sbjct: 500 GVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
                 W  L+  S++  N++    A++ +  +EP+++G ++L+SN+YA  G   +A K+
Sbjct: 560 QPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKM 619

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           R+ M D+ + K  G SW+E+ +K+H F      HPE E IY+ L+ L+ +M+
Sbjct: 620 RSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 240/538 (44%), Gaps = 45/538 (8%)

Query: 51  CSERTLLFNDWPQLVKISIG---SGDLKLGQ-AVHAFLLKSGSQNDTFEANNLINLYAKF 106
           C     +FN  P+   +S     SG L+  +  +   L     + D F  N ++  Y + 
Sbjct: 65  CDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRN 124

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSV- 164
            RL  A++LFD M  +  ++W SL+ GY  +G  +    +  +M  ++   +N    +  
Sbjct: 125 CRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYV 184

Query: 165 ----ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG-----------------TSLISM 203
               I EAC L E +   + I    +  GF     +G                  ++IS 
Sbjct: 185 HNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISG 244

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y   G   +A  +F     +DV     M+  Y + G  + A   F  +     E N+ ++
Sbjct: 245 YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSY 300

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
             +I+   +   ++  ++L     +    R IS  N ++T YG+ G   +A + FD + +
Sbjct: 301 NAMIAGYVQTKKMDIAREL----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQ 356

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           R+ +SW A+I+GY +SGH  +A+N F+E    G   + +     +  C+  + LELG Q+
Sbjct: 357 RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQI 416

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           HG A+K GY +   +G AL+ +Y K G +  A    +G   K    +N +L+G+      
Sbjct: 417 HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFG 476

Query: 444 DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
            +   + +F   + AG++PD +T   +LS  +    L RG + + YS+   Y       +
Sbjct: 477 RQ--ALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRG-TEYFYSMTKDYGVIPTSKH 533

Query: 504 --ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LG-KGALLLFE 554
              +I +  + G ++ A  + + +       SW A+L A  +HG   LG K A ++F+
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFK 591



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 44/175 (25%)

Query: 548 GALLLFEEMKR-----EGFAP-DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
           G L++  +  R     EGF    D  +   L   IY+GL + G   F  + + Y + P  
Sbjct: 741 GRLIILRDSHRFHHFNEGFCSCGDYWLQFFLLVVIYTGLLDTGAEYFYPMNEEYSVTPTS 800

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           +H+ CM+DLLGR  RL E                   L+  S++  N++    A++    
Sbjct: 801 KHYTCMIDLLGRVDRLEEG-----------------ALLGASRIHGNTELGEKAAQMFFK 843

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           + P+++G                      + M D+ + K  G SW E+ +K+H F
Sbjct: 844 MGPQNSGI---------------------SKMRDVGVQKVPGYSWFEVQNKIHTF 877


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 180/577 (31%), Positives = 300/577 (51%), Gaps = 4/577 (0%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S +L  CS  +    G  +HA  +K+G +++VF+   +++MY   G    A  VF  +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             K++   + MI  Y++AGE +MA  ++  +      PN+Y F +VIS C     V  G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++H  ++KFG      V N++++MY K     +A  +F    E N +S+ ALI+G+V + 
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              + +  F      G+  D      V+  C+   NL+ G +LH   +K    S   +G 
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
            ++ +Y++   ++ A         K    +N +++       D  + + V         +
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAA-CSHCDDHAKGLRVFKHMTEETNV 300

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
            PD  TF+  L+  A  A +  G+ +HA+ ++T    D+ VGNAL+ MYAKCG I  A+ 
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           IF  +   ++VSWN +++ +  HGLG+ A+ LFE+M   G  PD ++ +G+L AC ++GL
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            + G   FN +E+ YG+ P +EHF+C++D+LGRAGRL+EA   +   PF   P++  +L+
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480

Query: 641 SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
           S S+L  +       +K LL L+P     ++L+SN+YA  GM D  A+ R  +    L K
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           E G S IE++  +  F      H   +EI   L  L+
Sbjct: 541 EPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLS 577



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 235/475 (49%), Gaps = 10/475 (2%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G ++HA +LK+G+Q+D F +N+++N+YAK      A+++FD M  ++ ++W+++I G
Sbjct: 19  LRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISG 78

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G+ +  + +   M+      NE+  + ++ AC+ L     G++IH+ ++K G+E+ 
Sbjct: 79  YDQAGEPQMAIDLYSQMFLVP---NEYVFASVISACASLSAVTLGQKIHSRSLKFGYESI 135

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            FV  SLISMY       +A +VF      +    N +I  + +  + E     F  +  
Sbjct: 136 SFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQ 195

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
               P+ + F  V+ +C     ++ G +LH   VK  +     +GN I+TMY +  + +E
Sbjct: 196 QGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQE 255

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCS 372
           AE+ F  I E+++ISW  LI+         K +  F     +  +  D     + +  C+
Sbjct: 256 AEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACA 315

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             +++  G Q+H   ++     D+ +G ALV++YAK G +  A  +           +N 
Sbjct: 316 GLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNT 375

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           I++GF        E  + LF Q   +G+ PD VTF  LL+ + + A LV    L+  S++
Sbjct: 376 IIAGFGNHGLG--ERAVELFEQMNASGIRPDSVTFIGLLT-ACNHAGLVDKGQLYFNSME 432

Query: 493 TGY--AADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
             Y  A D+   + LI M  + G ++ A +  +      D V   ++LSA  LHG
Sbjct: 433 ETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHG 487



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 122/253 (48%), Gaps = 6/253 (2%)

Query: 67  ISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           I   + +LK G  +H   +K    +  F  N +I +Y++ N +  A+K F  +  +  I+
Sbjct: 211 ICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVIS 270

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEE---KFNEHTCSVILEACSLLEDRIFGEQIHA 183
           W +LI       D+    G+    + +EE   + ++ T +  L AC+ L     G+QIHA
Sbjct: 271 WNTLIAACSHCDDHAK--GLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHA 328

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +++    ++ VG +L++MY   GC   A ++F  + + ++   N +I  +   G  E 
Sbjct: 329 HLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGER 388

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVGNAIV 302
           A  +F  + +S   P+  TF  +++ C     V++G+   + +   +G+  +I   + ++
Sbjct: 389 AVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLI 448

Query: 303 TMYGKHGMSEEAE 315
            M G+ G   EAE
Sbjct: 449 DMLGRAGRLNEAE 461



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 9/158 (5%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G   +  G+ +HA L+++    D    N L+N+YAK   +  A  +F  M+  + ++W +
Sbjct: 316 GLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNT 375

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL--LEDR---IFGEQIHAF 184
           +I G+ + G  E  + +   M  S  + +  T   +L AC+   L D+    F      +
Sbjct: 376 IIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETY 435

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
            I    E+     + LI M   +G   EAE   R   +
Sbjct: 436 GIAPDIEH----FSCLIDMLGRAGRLNEAEEYMRKFPF 469


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 209/700 (29%), Positives = 351/700 (50%), Gaps = 40/700 (5%)

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV-----AQKLFDGMLVRSAITWTSLIKG 133
           AVHA L ++      F  N L+   A + RL V     A +L D M  R+A+++  +I  
Sbjct: 20  AVHAHLARAHPNASLFLRNCLL---ASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVA 76

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G     L             +  T +  L ACS   D   G+ +HA  +  G  N 
Sbjct: 77  YSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNG 136

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +F+  S+ SMY   G   EA  VF     +D    N ++  Y +AG  E    VF  +  
Sbjct: 137 LFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCR 196

Query: 254 SDFEPNDYTFTNVISVCYENL---------GVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
                N +   ++I  C  +          G    + +HG  VK G+  ++ + +A++ M
Sbjct: 197 HGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDM 256

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVR---SGHGGKAINGFLEFLDLGICCDS 361
           Y K G    A  +F ++ + N+I   A+I+G+ R   +    +A+  + E    G+    
Sbjct: 257 YAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSE 316

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
              ++++  C++      G Q+HG  +KH +  DV +G+AL+D+Y+  G ++      DG
Sbjct: 317 FSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCME------DG 370

Query: 422 FSC------KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           + C      +    + +++SG ++   +  E+ + LF +    G+ PD    S +++  A
Sbjct: 371 YRCFRSLPKQDVVIWTSVISGCVQN--ELFEEALRLFQESVRCGLRPDVFAMSSVMNACA 428

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S A    G  +   ++K+G+     +GN+ I M A+ G +D A + F+ +  RD+VSW+A
Sbjct: 429 SLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSA 488

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAP-DDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           ++S++A HG  + AL +F EM     AP ++I+ L +L AC + GL + G+  +  +   
Sbjct: 489 VISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDE 548

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           YGL P ++H  C+VDLLGRAGRL++A   I  S F +  ++WR+L++  ++  + +   L
Sbjct: 549 YGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQL 608

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
            + +++DLEP  + S++++ NMY   G L  A+K R  M +  + KE G SWIE+ S +H
Sbjct: 609 VADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGVH 668

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFELQD 754
            FVA  K HPES+ IY K+     EM  KV   S+ E QD
Sbjct: 669 SFVAGDKSHPESKAIYRKV----AEMVSKVAGISSRE-QD 703



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 243/499 (48%), Gaps = 26/499 (5%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D++ G+AVHA ++  G  N  F +N++ ++YA+   +  A+++FD    R  ++W +L+ 
Sbjct: 117 DVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLS 176

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI---------FGEQIHA 183
           GY+  G  E  L +   M R    +N      I++ C+                 E +H 
Sbjct: 177 GYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHG 236

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK---AGE 240
             +K+G + ++F+ +++I MY   G    A  +F+ +   +V  +N MI  + +   A  
Sbjct: 237 CVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADV 296

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE--EGKQLHGLAVKFGVVREISVG 298
           +  A  ++  L S   +P++++F++++  C  NL  E   GKQ+HG  +K     ++ +G
Sbjct: 297 AREALGLYSELQSRGMQPSEFSFSSILRAC--NLAGEFGFGKQIHGQVLKHSFQGDVYIG 354

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           +A++ +Y   G  E+  R F ++ +++++ WT++ISG V++    +A+  F E +  G+ 
Sbjct: 355 SALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLR 414

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D   +++V++ C+  +    G Q+   A+K G+     +G + + + A+ GD+ +A   
Sbjct: 415 PDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRR 474

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM-EPDPVTFSRLLSLSASQ 477
                 +    ++A++S           D + +F++   A +  P+ +TF  +L+  +  
Sbjct: 475 FQEMESRDVVSWSAVISSHAHHGC--ARDALCVFNEMLDAKVAPPNEITFLSILTACSHG 532

Query: 478 ACLVRGRSLHAYSI---KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSW 533
             +  G  L  Y I   + G +  +     ++ +  + G +  A    +  +   D V W
Sbjct: 533 GLVDEG--LRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVW 590

Query: 534 NAMLSAYALHG-LGKGALL 551
            ++L++  +HG + +G L+
Sbjct: 591 RSLLASCRIHGDMERGQLV 609



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 176/356 (49%), Gaps = 7/356 (1%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           +G G  ++ +AVH  ++K+G   D F A+ +I++YAK   L  A  LF  +   + I   
Sbjct: 225 VGGG--RIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLN 282

Query: 129 SLIKGYLDDGDYE---SVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
           ++I G+  +   +     LG+  ++     + +E + S IL AC+L  +  FG+QIH   
Sbjct: 283 AMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQV 342

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           +K  F+ +V++G++LI +Y  SGC  +    FR L  +DV     +I    +    E A 
Sbjct: 343 LKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEAL 402

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            +F   +     P+ +  ++V++ C        G+Q+  LAVK G  R  ++GN+ + M 
Sbjct: 403 RLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMC 462

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS-CL 364
            + G  + A R F  +  R+++SW+A+IS +   G    A+  F E LD  +   +    
Sbjct: 463 ARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITF 522

Query: 365 ATVIDGCSVCSNLELGLQLHGFA-IKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
            +++  CS    ++ GL+ +G    ++G    ++  T +VD+  + G L  A   +
Sbjct: 523 LSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFI 578



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 3/267 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G+   G+ +H  +LK   Q D +  + LI+LY+    ++   + F  +  +  + WTS+
Sbjct: 329 AGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSV 388

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G + +  +E  L +  +  R   + +    S ++ AC+ L     GEQI   A+KSGF
Sbjct: 389 ISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGF 448

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
                +G S I M   SG    A   F+ +  +DV   + +I  +   G +  A  VF  
Sbjct: 449 NRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNE 508

Query: 251 LLSSDF-EPNDYTFTNVISVCYENLGVEEGKQLHGLAV-KFGVVREISVGNAIVTMYGKH 308
           +L +    PN+ TF ++++ C     V+EG + +G+   ++G+   I     +V + G+ 
Sbjct: 509 MLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRA 568

Query: 309 GMSEEAERMF-DAISERNLISWTALIS 334
           G   +AE    D+    + + W +L++
Sbjct: 569 GRLADAEAFIRDSAFHDDAVVWRSLLA 595


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 206/685 (30%), Positives = 338/685 (49%), Gaps = 81/685 (11%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           L KSG  +D  E N  I+ Y +  R   A ++F  M   S++++ ++I GYL +G++E  
Sbjct: 51  LPKSGD-SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFE-- 107

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
             +A  ++    + +  + +V+++    + +R  G+    F      E +V    +++S 
Sbjct: 108 --LARMLFDEMPERDLVSWNVMIKG--YVRNRNLGKARELFERMP--ERDVCSWNTILSG 161

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF--------------- 248
           Y  +GC  +A  VF  +  K+    N ++  Y +  + E A  +F               
Sbjct: 162 YAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLL 221

Query: 249 -----------VHLLSSDFEPNDYTFTNVISVCY-ENLGVEEGKQLHGLAVKFGVVREIS 296
                              +  D    N I   Y +N  ++E +QL   +     V ++ 
Sbjct: 222 GGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESP----VHDVF 277

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
              A+V+ Y ++ M EEA  +FD + ERN +SW A+++GYV+    G+ +    E  D+ 
Sbjct: 278 TWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQ----GERVEMAKELFDVM 333

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
            C + S   T+I G                                   YA+ G +  A+
Sbjct: 334 PCRNVSTWNTMITG-----------------------------------YAQCGKISEAK 358

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            L D    +    + A+++G+ +  +    + + LF      G   +  +FS  LS  A 
Sbjct: 359 NLFDKMPKRDPVSWAAMIAGYSQ--SGHSYEALRLFVLMEREGGRLNRSSFSSALSTCAD 416

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L  G+ LH   +K GY     VGNAL+ MY KCGSI+ A  +FK ++ +DIVSWN M
Sbjct: 417 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 476

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++ Y+ HG G+ AL  FE MKREG  PDD +++ VL AC ++GL + G   F+ + Q YG
Sbjct: 477 IAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYG 536

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           +RP  +H+ACMVDLLGRAG L EA NL+ + PF     +W TL+  S++  N++ +  A+
Sbjct: 537 VRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 596

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
            ++  +EP+++G ++L+SN+YA  G   +  K+R  M D  + K  G SWIEI +K H F
Sbjct: 597 DKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTF 656

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
               + HPE +EI++ L+ L+  MK
Sbjct: 657 SVGDEFHPEKDEIFAFLEDLDLRMK 681



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 1/151 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+LG+ +H  L+K G +   F  N L+ +Y K   ++ A  LF  M  +  ++W ++I G
Sbjct: 420 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 479

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ-IHAFAIKSGFEN 192
           Y   G  E  L     M R   K ++ T   +L ACS       G Q  H      G   
Sbjct: 480 YSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRP 539

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
           N      ++ +   +G   EA N+ + + ++
Sbjct: 540 NSQHYACMVDLLGRAGLLEEAHNLMKNMPFE 570


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 193/678 (28%), Positives = 335/678 (49%), Gaps = 81/678 (11%)

Query: 91  NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM 150
           +D  + N  I+ Y +  + + A  +F+GM  RS +T+ ++I GYL +  ++    +   M
Sbjct: 58  SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
                                  DR                 ++     ++S Y  +G  
Sbjct: 118 ----------------------PDR-----------------DLISWNVMLSGYVKNGNL 138

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
             A  +F  +  KDV   N M+  + + G  E A  +F  +L      N+ ++  ++S  
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAY 194

Query: 271 YENLGVEEGKQLHGLAVKFGVV---------------------------REISVGNAIVT 303
            +N  +E+ ++L    + + +V                           R+    N ++T
Sbjct: 195 VQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMIT 254

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
            Y ++G+  EA R+F+ +  R++ +WTA++SG+V++G   +A   F E  +      ++ 
Sbjct: 255 GYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAM 314

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           +A  +    +    EL  Q+           +      +V  YA+ G++  A++L D   
Sbjct: 315 IAGYVQSQQIEKARELFDQMPS--------RNTSSWNTMVTGYAQCGNIDQAKILFDEMP 366

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    + A++SG+ +  +   E+ + LF + +  G   +    +  LS  A  A L  G
Sbjct: 367 QRDCISWAAMISGYAQ--SGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELG 424

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           + LH   +K G+    I GNAL+ MY KCGSI+ AF +F+ I+++DIVSWN M++ YA H
Sbjct: 425 KQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARH 484

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G GK AL LFE MK     PDD++++GVL AC ++G  + G+  FN + Q YG+    +H
Sbjct: 485 GFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKH 543

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           + CM+DLLGRAGRL EA+NL+ S PF      W  L+  S++  +++    A++++ ++E
Sbjct: 544 YTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEME 603

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P ++G ++L+SN+YA  G   E  ++R+ M D  + K  G SW+EI +K H F      H
Sbjct: 604 PDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSH 663

Query: 724 PESEEIYSKLDLLNDEMK 741
           PE+E IY+ L+ L+ E+K
Sbjct: 664 PEAERIYAYLEELDLELK 681



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 248/533 (46%), Gaps = 52/533 (9%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           W  ++   + +G+L   +A    L     + D    N +++ +A+   ++ A+K+FD ML
Sbjct: 125 WNVMLSGYVKNGNLSAARA----LFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML 180

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI---------LEACSL 171
           V++ I+W  L+  Y+ +G  E     A  ++ S+  +   + + +         L+    
Sbjct: 181 VKNEISWNGLLSAYVQNGRIED----ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARS 236

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
           L DR+         ++     N+     +I+ Y  +G   EA  +F  L  +DV     M
Sbjct: 237 LFDRM--------PVRDKISWNI-----MITGYAQNGLLSEARRLFEELPIRDVFAWTAM 283

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           +  + + G  + A  +F  +     E N+ ++  +I+   ++  +E+ ++L         
Sbjct: 284 VSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPS--- 336

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
            R  S  N +VT Y + G  ++A+ +FD + +R+ ISW A+ISGY +SG   +A++ F++
Sbjct: 337 -RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIK 395

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
               G   + S LA  +  C+  + LELG QLHG  +K G+ +    G AL+ +Y K G 
Sbjct: 396 MKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           ++ A  + +  + K    +N +++G+       E   + LF   ++  ++PD VT   +L
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE--ALALFESMKMT-IKPDDVTLVGVL 512

Query: 472 SLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRD 529
           S  +    + +G    ++     G  A+      +I +  + G +D A  + K +    D
Sbjct: 513 SACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPD 572

Query: 530 IVSWNAMLSAYALHG---LGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
             +W A+L A  +HG   LG+ A     EM+     PD+ S + VL + +Y+ 
Sbjct: 573 AATWGALLGASRIHGDTELGEKAAEKVFEME-----PDN-SGMYVLLSNLYAA 619



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 7/287 (2%)

Query: 53  ERTLLFNDWPQLVKISIGS---GDLKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNR 108
           E T +F + P+  ++S  +   G ++  Q   A  L       +T   N ++  YA+   
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGN 354

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
           +D A+ LFD M  R  I+W ++I GY   G  E  L +   M R     N    +  L +
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSS 414

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
           C+ +     G+Q+H   +K+GF+     G +L++MY   G   EA +VF  +  KD+   
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAV 287
           N MI  Y + G  + A  +F   +    +P+D T   V+S C     V++G +  + +  
Sbjct: 475 NTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQ 533

Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
            +G+         ++ + G+ G  +EA  +  ++    +  +W AL+
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580


>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
 gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
          Length = 760

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 192/679 (28%), Positives = 333/679 (49%), Gaps = 22/679 (3%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           ++++G +   F +NNL+  Y +      A+ LFDGM  R  +TW +LI GY   G   S 
Sbjct: 1   MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60

Query: 144 LGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLIS 202
           LG   D  R      +  T + +L AC    D   G   H  A+ SG     FV  S+I 
Sbjct: 61  LGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVID 120

Query: 203 MYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYT 262
           MY       E    F     +D    N ++  Y + G  E+A +V V +  S  E + + 
Sbjct: 121 MYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFA 180

Query: 263 FTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
              ++  C E    E+ ++ LHG  +K G+  ++ VG+ +V MY K+G  EEA ++F +I
Sbjct: 181 LGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSI 240

Query: 322 SERNLISWTALISGYVRSGHGG------KAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
             +N++ +  +I+G+ R G+        +A+  +       I        +V++ C++ +
Sbjct: 241 PSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTN 300

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA------E 429
            +    Q+H   I  G+  D  +G AL+++Y+K      AR++ D   C +         
Sbjct: 301 AVRCWRQIHAHVILFGFEDDEFIGNALINLYSK------ARLVDDSLRCFHRTPKQEIFT 354

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + ++++ F+     D+   + LF   R  G+EPD  T S +++  A  +  +    +H Y
Sbjct: 355 WTSMITAFVRNEHSDK--ALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCY 412

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           ++K+G+    + GN+ I MY   G +  A + F+ I   D  SW+ M+ +YA+HG  + A
Sbjct: 413 AVKSGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREA 472

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           LLLF++M+      ++ + L VL AC + GL + G   +  +   Y   P ++H ACMVD
Sbjct: 473 LLLFKKMRDCSVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVD 532

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLG  G++++A + INSS      +LW TL+   ++  +    I   ++L+ LEP  A S
Sbjct: 533 LLGHVGKVADAEDFINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLMTLEPFAASS 592

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++++ N+Y   G +  A + R  M +  ++KE+G SW E      HFV       + +  
Sbjct: 593 YVMLYNLYMDAGKISLAMRTRGQMRERGMTKESGVSWAEFGGSCQHFVDGDNSCSQKDAT 652

Query: 730 YSKLDLLNDEMKLKVKDSS 748
           +++L+ L   +K K + SS
Sbjct: 653 FTRLEELLVRVKQKTERSS 671



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 229/484 (47%), Gaps = 11/484 (2%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G+GD + G+A H   + SG     F +N++I++YAK   +D  +  FD    R  ++W  
Sbjct: 89  GAGDWRSGRAAHGLAVVSGLARTAFVSNSVIDMYAKCRMIDEVRLAFDRAEERDEVSWNL 148

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLED-RIFGEQIHAFAIKS 188
           L+  Y+  G  E    +   M+RS  + +      IL+ACS LED       +H   IK 
Sbjct: 149 LLSAYVRMGWPEVAANVLVWMHRSGVELDAFALGGILKACSELEDSEDVRRMLHGCVIKV 208

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG-----ESEM 243
           G + +VFVG++++ MY  +G   EA  VF  +  ++V   N MI  + + G     E  M
Sbjct: 209 GLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSIPSQNVVIYNTMIAGFARLGNDPCPEIRM 268

Query: 244 -AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  ++ ++      P+ +TF +V+ VC     V   +Q+H   + FG   +  +GNA++
Sbjct: 269 EAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTNAVRCWRQIHAHVILFGFEDDEFIGNALI 328

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +Y K  + +++ R F    ++ + +WT++I+ +VR+ H  KA+N F      G+  D  
Sbjct: 329 NLYSKARLVDDSLRCFHRTPKQEIFTWTSMITAFVRNEHSDKALNLFKGLRYTGVEPDQF 388

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +++V++ C+  S      Q+H +A+K G+      G + +++Y   GDLK+A+   +  
Sbjct: 389 TMSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERI 448

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
               T  ++ ++  +   +   E + ++LF + R   +  +   F  +L   + Q  +  
Sbjct: 449 PSLDTFSWSQMILSY--AVHGHEREALLLFKKMRDCSVIINEFAFLAVLVACSHQGLIDE 506

Query: 483 G-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAY 540
           G R   +      +  DV     ++ +    G +  A         + D V W+ +L A 
Sbjct: 507 GFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKVADAEDFINSSGLENDSVLWHTLLRAC 566

Query: 541 ALHG 544
            +HG
Sbjct: 567 RIHG 570


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 295/554 (53%), Gaps = 8/554 (1%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVF   +LI+ Y        A  VF  +   D+   N +I  Y   GE      +F  + 
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                 + +T + VI+ C +++G+   +QLH   V  G     SV NA++  Y + G   
Sbjct: 134 ELRLGLDGFTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKGFLS 191

Query: 313 EAERMFDAISE---RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           EA R+F  + E   R+ +SW A+I    +   G +A+  F E +  G+  D   +A+V+ 
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLT 251

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSARMLLDGFSCKYTA 428
             +   +L  G Q HG  IK G+  +  +G+ L+D+Y+K  G +   R + +  +     
Sbjct: 252 AFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLV 311

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +N ++SGF     D  ED +  F + +  G  PD  +F  + S  ++ +    G+ +HA
Sbjct: 312 LWNTMISGF-SLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHA 370

Query: 489 YSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            +IK+    + V V NAL+ MY+KCG++  A ++F  + + + VS N+M++ YA HG+  
Sbjct: 371 LAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEV 430

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            +L LFE M  +  AP+ I+ + VL AC+++G  E G   FN +++ + + P  EH++CM
Sbjct: 431 ESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCM 490

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           +DLLGRAG+L EA  +I + PF+   + W TL+   +   N + ++ A+   L LEP +A
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNA 550

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
             ++++SNMYA     +EAA V+  M +  + K+ GCSWIEID K+H FVA    HP  +
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610

Query: 728 EIYSKLDLLNDEMK 741
           EI+  +  +  +MK
Sbjct: 611 EIHVYMGKMLKKMK 624



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 203/468 (43%), Gaps = 50/468 (10%)

Query: 56  LLFNDWPQLVKISIGSGDLKLGQAVHAFLLKS-------------------GSQND---- 92
           L    +  L+K  I   DL  G+ +HA   KS                   GS ++    
Sbjct: 7   LQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66

Query: 93  --------TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL 144
                    F  N LIN YAK + + +A+++FD +     +++ +LI  Y D G+    L
Sbjct: 67  FHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTL 126

Query: 145 GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
            +  ++       +  T S ++ AC   +D     Q+H F +  G +    V  ++++ Y
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACY 184

Query: 205 FHSGCFREAENVFRGLAY---KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY 261
              G   EA  VFR +     +D    N MI+   +  E   A  +F  ++    + + +
Sbjct: 185 SRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMF 244

Query: 262 TFTNVIS--VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-HGMSEEAERMF 318
           T  +V++   C ++L    G+Q HG+ +K G      VG+ ++ +Y K  G   E  ++F
Sbjct: 245 TMASVLTAFTCVKDL--VGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVF 302

Query: 319 DAISERNLISWTALISGY-VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           + I+  +L+ W  +ISG+ +        +  F E    G   D      V   CS  S+ 
Sbjct: 303 EEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSP 362

Query: 378 ELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
            LG Q+H  AIK     + V +  ALV +Y+K G++  AR + D      T   N++++G
Sbjct: 363 SLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAG 422

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           + +   + E   + LF       + P+ +TF  +LS     AC+  G+
Sbjct: 423 YAQHGVEVES--LRLFELMLEKDIAPNSITFIAVLS-----ACVHTGK 463



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 169/362 (46%), Gaps = 9/362 (2%)

Query: 67  ISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV---RS 123
           I+    D+ L + +H F++  G        N ++  Y++   L  A+++F  M     R 
Sbjct: 148 ITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRD 207

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W ++I       +    +G+  +M R   K +  T + +L A + ++D + G Q H 
Sbjct: 208 EVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHG 267

Query: 184 FAIKSGFENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE-S 241
             IKSGF  N  VG+ LI +Y   +G   E   VF  +   D+   N MI  ++   + S
Sbjct: 268 MMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLS 327

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNA 300
           E     F  +  + F P+D +F  V S C        GKQ+H LA+K  V    +SV NA
Sbjct: 328 EDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNA 387

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V MY K G   +A R+FD + E N +S  ++I+GY + G   +++  F   L+  I  +
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPN 447

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL--SDVRLGTALVDIYAKGGDLKSARML 418
           S     V+  C     +E G Q +   +K  +    +    + ++D+  + G LK A  +
Sbjct: 448 SITFIAVLSACVHTGKVEEG-QKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERI 506

Query: 419 LD 420
           ++
Sbjct: 507 IE 508



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 159/350 (45%), Gaps = 40/350 (11%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVK-----------------------------FGVV 292
           TF N++  C     +  GK LH L  K                             F + 
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 293 REISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
           +  +V   N ++  Y KH +   A R+FD I + +++S+  LI+ Y   G  G  +  F 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
           E  +L +  D   L+ VI  C    ++ L  QLH F +  G+     +  A++  Y++ G
Sbjct: 131 EVRELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKG 188

Query: 411 DLKSARMLLDGF---SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
            L  AR +         +    +NA++    +    +  + + LF +    G++ D  T 
Sbjct: 189 FLSEARRVFREMGEGGGRDEVSWNAMIVACGQH--REGMEAVGLFREMVRRGLKVDMFTM 246

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC-GSIDGAFQIFKGIS 526
           + +L+       LV GR  H   IK+G+  +  VG+ LI +Y+KC GS+    ++F+ I+
Sbjct: 247 ASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEIT 306

Query: 527 DRDIVSWNAMLSAYALH-GLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             D+V WN M+S ++L+  L +  L  F EM+R GF PDD S + V  AC
Sbjct: 307 APDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSAC 356



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 7/289 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF-NRLDVAQKLFDGMLVRSAITWTSLI 131
           DL  G+  H  ++KSG   ++   + LI+LY+K    +   +K+F+ +     + W ++I
Sbjct: 258 DLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMI 317

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCS--VILEACSLLEDRIFGEQIHAFAIKSG 189
            G+    D  S  G+ C        F    CS   +  ACS L     G+Q+HA AIKS 
Sbjct: 318 SGFSLYEDL-SEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSD 376

Query: 190 FE-NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
              N V V  +L++MY   G   +A  VF  +   +   +N MI  Y + G    +  +F
Sbjct: 377 VPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLF 436

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGK 307
             +L  D  PN  TF  V+S C     VEEG K  + +  +F +  E    + ++ + G+
Sbjct: 437 ELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGR 496

Query: 308 HGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            G  +EAER+ + +      I W  L+    + G+   A+    EFL L
Sbjct: 497 AGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRL 545



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 4/129 (3%)

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           TF  LL    +Q  L+ G+ LHA   K+       + N    +Y+KCGS+  A   F   
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
              ++ S+N +++AYA H L   A  +F+E+ +    PD +S   ++ A    G     +
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQ----PDIVSYNTLIAAYADRGECGPTL 126

Query: 586 CLFNEIEQI 594
            LF E+ ++
Sbjct: 127 RLFEEVREL 135


>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
          Length = 817

 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 187/636 (29%), Positives = 333/636 (52%), Gaps = 9/636 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L +G+AVH  +L+  S+ D F   +++N+Y K  ++  A   F  M +R+ ++WT+ I 
Sbjct: 190 ELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIA 249

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G++   D  + + +  +M RS    N++T + IL ACS         Q+H   IKS    
Sbjct: 250 GFVQQEDPVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYL 309

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  V  +LIS Y ++G  +  E VF+ +     R +    +        + +  +   +L
Sbjct: 310 DHVVKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRHSVQRSIQLLRRML 369

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                PND  + +V S    +   E G+QLH L +K G +  + V +A+ TMY +    +
Sbjct: 370 FQCLRPNDKCYASVFSSVDSS---ELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLK 426

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           ++ ++F+ + E++ +SWT++I+G+   GH  +A       +  G   +   L+ ++  C+
Sbjct: 427 DSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACN 486

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
           +   L  G ++HG  ++  Y     +   LV +Y+K  DL++AR L D   CK     ++
Sbjct: 487 IPECLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSS 545

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++SG+        E+ + LF     AG   D    S ++S+ A+ A    G+ LH Y+ K
Sbjct: 546 MISGYATN--GYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASK 603

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G  +D+ V ++L+ +Y+K G++D + ++F  +   D+V+W A++  YA HG  + AL L
Sbjct: 604 VGILSDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALAL 663

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+ M R G  PD + ++ VL AC  +GL E G   FN +  +YG+ P+L H+ CMVDLLG
Sbjct: 664 FDLMIRCGVKPDTVILVSVLSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLG 723

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           R+GRL EA + I S P   + ++W TL++  ++  +         ++ + E  D+G F  
Sbjct: 724 RSGRLVEAKSFIESMPVKPNSMVWSTLLAACRVHDDVVLGRFVENKIHE-ENCDSGCFAT 782

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           +SN+ A  G  +   ++R ++ D+   KE G S++E
Sbjct: 783 MSNIRANSGDWEGVMEIRKSVKDVE--KEPGWSFLE 816



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 235/495 (47%), Gaps = 14/495 (2%)

Query: 86  KSGSQNDTFEANNLINLYAKFNRLDVAQKLF-DGMLVRSAITWTSLIKGYLDDGDYESVL 144
           K G   D +  + +++L AK  RL  A + F DG    S + W + I G + +G++   +
Sbjct: 100 KDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGV 159

Query: 145 GIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
            +  DM R S  + N  T S +L AC+  E+   G  +H   ++   E +VFVGTS+++M
Sbjct: 160 EMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNM 219

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y   G    A N F  +  ++V      I  + +  +   A  +   +L S    N YT 
Sbjct: 220 YVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTA 279

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF---DA 320
           T+++  C +   + E  Q+HG+ +K  +  +  V  A+++ Y   G  +  E++F   D 
Sbjct: 280 TSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDT 339

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           +S R++  W+A ISG  R     ++I      L   +  +  C A+V    S   + ELG
Sbjct: 340 VSNRSI--WSAFISGVSRHS-VQRSIQLLRRMLFQCLRPNDKCYASVF---SSVDSSELG 393

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            QLH   IK G++  V + +AL  +Y++  DLK +  + +    +    + ++++GF   
Sbjct: 394 RQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATH 453

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                 +   +       G  P+ V+ S +LS      CL++G+ +H + ++  Y     
Sbjct: 454 --GHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTS 510

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           + + L++MY+KC  +  A ++F     +D +  ++M+S YA +G  + AL LF+ M   G
Sbjct: 511 INHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAG 570

Query: 561 FAPDDISILGVLQAC 575
           F  D      ++  C
Sbjct: 571 FHIDRFLCSSIISIC 585



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 218/464 (46%), Gaps = 15/464 (3%)

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEY 235
           F EQ++  A K G   + ++ ++++ +    G   +A   F    Y+  V C N  I   
Sbjct: 90  FAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGA 149

Query: 236 NKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCY--ENLGVEEGKQLHGLAVKFGVV 292
            + GE  +   +F+ ++  S  EPN +T++ V+S C   E LGV  G+ +HG+ ++    
Sbjct: 150 VRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGV--GRAVHGMVLRRDSE 207

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            ++ VG +IV MY K G    A   F  +  RN++SWT  I+G+V+      A+    E 
Sbjct: 208 YDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEM 267

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
           L  G+  +     +++  CS  S +    Q+HG  IK     D  +  AL+  YA  G +
Sbjct: 268 LRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAV 327

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDE-EDVMVLFSQQRLAGMEPDPVTFSRLL 471
           +    +        T    +I S F+  ++    +  + L  +     + P+   ++ + 
Sbjct: 328 QLCEKVFQEVD---TVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVF 384

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           S   S      GR LH   IK G+   V+V +AL TMY++C  +  ++++F+ + ++D V
Sbjct: 385 SSVDSSEL---GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEV 441

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           SW +M++ +A HG    A  +   M  EGF P+D+S+  +L AC        G  +   +
Sbjct: 442 SWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHV 501

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            + YG    + H  C+V +  +   L  A  L +++P  +  +L
Sbjct: 502 LRAYGRTTSINH--CLVSMYSKCKDLQTARKLFDATPCKDQIML 543


>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Glycine max]
          Length = 686

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 198/671 (29%), Positives = 331/671 (49%), Gaps = 36/671 (5%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           +K  +++H+ ++K G  N  F  N++I++YAK +R D A+ LFD M  R+ +++T+++  
Sbjct: 19  IKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIVSFTTMVSA 78

Query: 134 YLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           + + G     L +   M  S+  + N+   S +L+AC L+ D   G  +H    ++  E 
Sbjct: 79  FTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEARLEF 138

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  +  +L+ MY   G   +A+ VF  +  K+    N +IL + K G    AF++F  + 
Sbjct: 139 DTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFDQMP 198

Query: 253 SSD------------------------------FEPNDYTFTNVISVCYENLGVEEGKQL 282
             D                               + + +TF   +  C     +  G+Q+
Sbjct: 199 EPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQI 258

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE--RNLISWTALISGYVRSG 340
           H   +K G+       ++++ MY    + +EA ++FD  S    +L  W +++SGYV +G
Sbjct: 259 HCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANG 318

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
              +A+         G   DS   +  +  C    NL L  Q+HG  I  GY  D  +G+
Sbjct: 319 DWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGS 378

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
            L+D+YAK G++ SA  L +    K    +++++ G           V  LF       +
Sbjct: 379 ILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCAR--LGLGTLVFSLFMDMVHLDL 436

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQ 520
           E D    S +L +S+S A L  G+ +H++ +K GY ++ ++  AL  MYAKCG I+ A  
Sbjct: 437 EIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALA 496

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL 580
           +F  + + D +SW  ++   A +G    A+ +  +M   G  P+ I+ILGVL AC ++GL
Sbjct: 497 LFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTACRHAGL 556

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            E    +F  IE  +GL P  EH+ CMVD+  +AGR  EA NLIN  PF     +W +L+
Sbjct: 557 VEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTIWCSLL 616

Query: 641 SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
                  N   + + ++ LL   P+DA  +I++SN+YA  GM D  +KVR  +  + + K
Sbjct: 617 DACGTYKNRHLANIVAEHLLATSPEDASVYIMLSNVYASLGMWDNLSKVREAVRKVGI-K 675

Query: 701 EAGCSWIEIDS 711
            AG SWIEI S
Sbjct: 676 GAGKSWIEIFS 686



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 217/498 (43%), Gaps = 46/498 (9%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L  C   +     + +H+  IK G  N++F+  S+IS+Y     F +A  +F  + ++++
Sbjct: 10  LRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNI 69

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
                M+  +  +G    A  ++ H+L S   +PN + ++ V+  C     VE G  +H 
Sbjct: 70  VSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQ 129

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
              +  +  +  + NA++ MY K G   +A+R+F  I  +N  SW  LI G+ + G    
Sbjct: 130 HVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRD 189

Query: 345 AINGF--------------------------LEFLDL----GICCDSSCLATVIDGCSVC 374
           A N F                          L+FL +    G+  D+      +  C + 
Sbjct: 190 AFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLL 249

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS--CKYTAEFNA 432
             L +G Q+H   IK G        ++L+D+Y+    L  A  + D  S   +  A +N+
Sbjct: 250 GELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNS 309

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +LSG++     D    + + +    +G + D  TFS  L +      L     +H   I 
Sbjct: 310 MLSGYVAN--GDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIIT 367

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            GY  D +VG+ LI +YAK G+I+ A ++F+ + ++D+V+W++++   A  GLG     L
Sbjct: 368 RGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSL 427

Query: 553 FEEMKREGFAPDDISILGVLQ-----ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
           F +M       D   +  VL+     A + SG      CL    E    +   L      
Sbjct: 428 FMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTAL------ 481

Query: 608 VDLLGRAGRLSEAMNLIN 625
            D+  + G + +A+ L +
Sbjct: 482 TDMYAKCGEIEDALALFD 499



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K+ I   +L+L   VH  ++  G + D    + LI+LYAK   ++ A +LF+ +  +  
Sbjct: 346 LKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDV 405

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           + W+SLI G    G    V  +  DM   + + +    S++L+  S L     G+QIH+F
Sbjct: 406 VAWSSLIVGCARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSF 465

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +K G+E+   + T+L  MY   G   +A  +F  L   D      +I+   + G ++ A
Sbjct: 466 CLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKA 525

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVT 303
             +   ++ S  +PN  T   V++ C     VEE   +   +  + G+       N +V 
Sbjct: 526 ISILHKMIESGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVD 585

Query: 304 MYGKHGMSEEAERMFD 319
           ++ K G  +EA  + +
Sbjct: 586 IFAKAGRFKEARNLIN 601



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 14/220 (6%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K+S     L+ G+ +H+F LK G +++      L ++YAK   ++ A  LFD +    
Sbjct: 446 VLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEID 505

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++WT +I G   +G  +  + I   M  S  K N+ T   +L AC     R  G    A
Sbjct: 506 TMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTAC-----RHAGLVEEA 560

Query: 184 FAIKSGFENNVFVG------TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY-N 236
           + I    E    +         ++ ++  +G F+EA N+   + +K  + +   +L+   
Sbjct: 561 WTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTIWCSLLDACG 620

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
                 +A  V  HLL++   P D +   ++S  Y +LG+
Sbjct: 621 TYKNRHLANIVAEHLLAT--SPEDASVYIMLSNVYASLGM 658


>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
 gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
          Length = 576

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 181/534 (33%), Positives = 283/534 (52%), Gaps = 21/534 (3%)

Query: 108 RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF----NEHTCS 163
           +L +A+++FD +    A  + +LI+ Y   G + +    A D+YRS   F    N++T  
Sbjct: 48  QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHA----AIDLYRSMLYFRVPPNKYTFP 103

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
            +L+ACS L D   G  IHA A   G   ++FV T+LI +Y     F  A NVF  +  +
Sbjct: 104 FVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR 163

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSD----FEPNDYTFTNVISVCYENLGVEEG 279
           DV   N M+  Y   G   M  H   HLL         PN  T  +++ +  ++  + +G
Sbjct: 164 DVVAWNAMLAGYANHG---MYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQG 220

Query: 280 KQLHGLAVKFGVVR---EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
             +H   ++  + +   ++ +G A++ MY K      A R+F  ++ RN ++W+ALI G+
Sbjct: 221 TSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGF 280

Query: 337 VRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           V      +A N F + L  G+C   ++ +A+ +  C+  ++L +G QLH    K G  +D
Sbjct: 281 VLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHAD 340

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           +  G +L+ +YAK G +  A ML D  + K T  + A+LSG+++      E+  ++F + 
Sbjct: 341 LTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQN--GKAEEAFLVFKKM 398

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           +   ++PD  T   L+   +  A L  GR  H   I  G A +  + N+LI MYAKCG I
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRI 458

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           D + Q+F  +  RDIVSWN M++ Y +HGLGK A  LF  MK +GF PDD++ + ++ AC
Sbjct: 459 DLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAAC 518

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
            +SGL   G   F+ +   YG+ P +EH+ CMVDLL R G L EA   I S P 
Sbjct: 519 SHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPL 572



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 221/478 (46%), Gaps = 22/478 (4%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K      DL  G+ +HA     G   D F +  LI+LY +  R   A  +F  M 
Sbjct: 102 FPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP 161

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGE 179
           +R  + W +++ GY + G Y   +    DM  R   + N  T   +L   +       G 
Sbjct: 162 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGT 221

Query: 180 QIHAFAIKSGFENN---VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            +HA+ +++  + N   V +GT+L+ MY        A  VF G+  ++    + +I  + 
Sbjct: 222 SVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFV 281

Query: 237 KAGESEMAFHVFVHLLSSDF-EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
                  AF++F  +L       +  +  + + VC     +  G QLH L  K G+  ++
Sbjct: 282 LCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADL 341

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           + GN++++MY K G+  EA  +FD I+ ++ IS+ AL+SGYV++   GKA   FL F  +
Sbjct: 342 TAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQN---GKAEEAFLVFKKM 398

Query: 356 GIC---CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
             C    D + + ++I  CS  + L+ G   HG  I  G   +  +  +L+D+YAK G +
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRI 458

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             +R + D    +    +N +++G+   I    ++   LF   +  G EPD VTF  L++
Sbjct: 459 DLSRQVFDKMPARDIVSWNTMIAGY--GIHGLGKEATTLFLSMKNQGFEPDDVTFICLIA 516

Query: 473 LSASQACLVRGRSL-----HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
             +    +  G+       H Y I       +     ++ + A+ G +D A+Q  + +
Sbjct: 517 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGFLDEAYQFIQSM 570



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 174/372 (46%), Gaps = 31/372 (8%)

Query: 72  GDLKLGQAVHAFLLKS---GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           G L  G +VHA+ L++    ++        L+++YAK   L  A ++F GM VR+ +TW+
Sbjct: 215 GALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWS 274

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFN-------EHTC-------SVILEACSLLED 174
           +LI G+           + CD  R  E FN       E  C       +  L  C+ L D
Sbjct: 275 ALIGGF-----------VLCD--RMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLAD 321

Query: 175 RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
              G Q+HA   KSG   ++  G SL+SMY  +G   EA  +F  +A KD      ++  
Sbjct: 322 LRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSG 381

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
           Y + G++E AF VF  + + + +P+  T  ++I  C     ++ G+  HG  +  G+  E
Sbjct: 382 YVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALE 441

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
            S+ N+++ MY K G  + + ++FD +  R+++SW  +I+GY   G G +A   FL   +
Sbjct: 442 TSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKN 501

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
            G   D      +I  CS    +  G         K+G L  +     +VD+ A+GG L 
Sbjct: 502 QGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLD 561

Query: 414 SARMLLDGFSCK 425
            A   +     K
Sbjct: 562 EAYQFIQSMPLK 573


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 165/476 (34%), Positives = 266/476 (55%), Gaps = 16/476 (3%)

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMY--------------GKHGMSEEAERMFDAISER 324
           G  LH LA++ G   +    NA++ +Y              G   + E   ++FD + E+
Sbjct: 77  GASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEK 136

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           +++SW  L+ G   SG  G+A+    E    G   DS  L++V+   +  +++  G++LH
Sbjct: 137 DVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELH 196

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
           GFA ++G+  DV +G++L+D+YA       +  + D    +    +N++L+G  +  + D
Sbjct: 197 GFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVD 256

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
           E   + LF +   +G++P PVTFS L+    + A L+ G+ LHAY I+ G+  +V + ++
Sbjct: 257 E--ALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSS 314

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           LI MY KCG++  A +IF  I   DIVSW AM+  +ALHG  + AL+LF+ M+     P+
Sbjct: 315 LIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPN 374

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
            I+ L VL AC ++GL + G   FN +   YG+ P LEH A + D LGR G+L EA N I
Sbjct: 375 HITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFI 434

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
           +      +  +W TL+   K+  N+  +   +K++ DLEP+  GS I++SN Y+  G  +
Sbjct: 435 SGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWN 494

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           EAA +R +M    + KE  CSWIE+ +K H FVA  K HP  E I   L++ +++M
Sbjct: 495 EAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQM 550



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 199/419 (47%), Gaps = 24/419 (5%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR------------- 108
           P  +K     G   LG ++HA  L+SG+  D F AN L+NLY K                
Sbjct: 62  PGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAV 121

Query: 109 -LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE 167
            L+  +K+FD M  +  ++W +L+ G  + G +   LG+  +M+R   K +  T S +L 
Sbjct: 122 VLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLP 181

Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE--AENVFRGLAYKDV 225
             +   D   G ++H FA ++GF ++VFVG+SLI MY  + C R   +  VF  L  +D 
Sbjct: 182 IFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMY--ANCTRTDYSVKVFDNLPVRDA 239

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
              N M+    + G  + A  +F  +L S  +P   TF+++I  C     +  GKQLH  
Sbjct: 240 ILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAY 299

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
            ++ G    + + ++++ MY K G    A R+FD I   +++SWTA+I G+   G   +A
Sbjct: 300 VIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREA 359

Query: 346 INGFLEFLDLG-ICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALV 403
           +  F + ++LG +  +      V+  CS    ++ G +  +  +  +G +  +    AL 
Sbjct: 360 LVLF-DRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALA 418

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           D   + G L+ A   + G   K TA   ++ S  +      +  V+     +++  +EP
Sbjct: 419 DTLGRPGKLEEAYNFISGMKIKPTA---SVWSTLLRACKVHKNTVLAEEVAKKIFDLEP 474



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/459 (22%), Positives = 210/459 (45%), Gaps = 32/459 (6%)

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL-------EACSLLEDRIFG 178
           +W   I+     GD+   + +   M  S+       CS +L       ++C+ L  R  G
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAA---ACSSVLTSLPGALKSCAALGLRALG 77

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYF-------HSG-------CFREAENVFRGLAYKD 224
             +HA A++SG   + F   +L+++Y        HS               VF  +  KD
Sbjct: 78  ASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKD 137

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V   N ++L   ++G    A  +   +     +P+ +T ++V+ +  E   V  G +LHG
Sbjct: 138 VVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHG 197

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            A + G   ++ VG++++ MY     ++ + ++FD +  R+ I W ++++G  ++G   +
Sbjct: 198 FATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDE 257

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+  F   L  GI       +++I  C   ++L LG QLH + I+ G+  +V + ++L+D
Sbjct: 258 ALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLID 317

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y K G++  AR + D         + A++ G    +     + +VLF +  L  ++P+ 
Sbjct: 318 MYCKCGNVSIARRIFDRIQSPDIVSWTAMIMG--HALHGPAREALVLFDRMELGNLKPNH 375

Query: 465 VTFSRLLSLSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           +TF  +L+  +    + +G +  ++ S   G    +    AL     + G ++ A+    
Sbjct: 376 ITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFIS 435

Query: 524 GISDRDIVS-WNAMLSAYALHGLGKGALLLFEEMKREGF 561
           G+  +   S W+ +L A  +H       +L EE+ ++ F
Sbjct: 436 GMKIKPTASVWSTLLRACKVH----KNTVLAEEVAKKIF 470


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 163/485 (33%), Positives = 288/485 (59%), Gaps = 5/485 (1%)

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
            N    EG   H   ++ G+  +    N ++ MY K G+ E A ++FD +  R+L+SW  
Sbjct: 59  RNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNT 118

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV-CSNLELGLQLHGFAIKH 390
           ++  + ++G   KA+  F++    G  C    +++V+  C+  C   E   QLHGFA+K 
Sbjct: 119 MVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK-QLHGFALKT 177

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
              S+V +GTAL+D+YAK G +K A ++ +    +    ++++++G+++   +  E+ +V
Sbjct: 178 ALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN--ELYEEALV 235

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           LF + +  G+E +  T S  LS  A++A L+ G+ + A S KTG  +++ V ++LI MYA
Sbjct: 236 LFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYA 295

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG I+ A+ +F  + ++++V WNA+LS ++ H     A++ FE+M++ G  P+DI+ + 
Sbjct: 296 KCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYIS 355

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC + GL E G   F+ + +++ + P + H++CMVD+LGRAG L EA + I+  PF 
Sbjct: 356 VLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFD 415

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
            +  +W +L++  ++  N + + +A+K L ++EP +AG+ +L+SN+YA     +E A+ R
Sbjct: 416 ATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARAR 475

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLLNDEMKLKVKDSSA 749
             + + +  KE G SWIEI  K+H F+   ++HP   EIY KL DL+ +  K+  K  + 
Sbjct: 476 NLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTE 535

Query: 750 FELQD 754
            +L D
Sbjct: 536 HDLHD 540



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 209/417 (50%), Gaps = 16/417 (3%)

Query: 24  KKKVPINTFSPNPKSQVAYLCSISSVSCSE-----------RTLLFNDWPQLVKISIGSG 72
           K+K+  N+FS     QV +L +IS+                R    ++   L++ S  + 
Sbjct: 6   KQKILCNSFSL----QVRHLLAISNAMAERPSSKELVWVGIRATHVSELQHLLQSSARNR 61

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
               G A HA +++ G + DT  +N L+N+Y+K   ++ A+KLFD M VRS ++W +++ 
Sbjct: 62  AAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVG 121

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            +  +GD E  L +   M +     +E T S ++ AC+        +Q+H FA+K+  ++
Sbjct: 122 SHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDS 181

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVFVGT+L+ +Y   G  ++A  VF  +  +     + M+  Y +    E A  +F    
Sbjct: 182 NVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQ 241

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +   E N +T ++ +S C     + EGKQ+  ++ K G+   I V ++++ MY K G+ E
Sbjct: 242 AMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIE 301

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA  +F ++ E+N++ W A++SG+ R     +A+  F +   +GIC +     +V+  CS
Sbjct: 302 EAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACS 361

Query: 373 VCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
               +E G +     I+ H    +V   + +VDI  + G L  A+  +D      TA
Sbjct: 362 HLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATA 418



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 158/309 (51%), Gaps = 2/309 (0%)

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
           I G   HA  I+ G   +      L++MY   G    A  +F  +  + +   N M+  +
Sbjct: 64  IEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSH 123

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G+ E A  +F+ +       +++T ++V+  C     V E KQLHG A+K  +   +
Sbjct: 124 TQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNV 183

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VG A++ +Y K G+ ++A  +F+ + ER+ ++W+++++GYV++    +A+  F     +
Sbjct: 184 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  +   +++ +  C+  + L  G Q+   + K G  S++ + ++L+D+YAK G ++ A
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 303

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             +      K    +NAILSGF   +   E   M+ F + +  G+ P+ +T+  +LS  +
Sbjct: 304 YTVFSSVEEKNVVLWNAILSGFSRHVRSLE--AMIYFEKMQQMGICPNDITYISVLSACS 361

Query: 476 SQACLVRGR 484
               + +GR
Sbjct: 362 HLGLVEKGR 370



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 95/181 (52%), Gaps = 14/181 (7%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
              LL  SA     + G + HA  I+ G  AD I  N L+ MY+KCG ++ A ++F  + 
Sbjct: 50  LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 109

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
            R +VSWN M+ ++  +G  + AL+LF +M++EG +  + ++  V+ AC          C
Sbjct: 110 VRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCAC------AAKCC 163

Query: 587 LFNEIEQIYG--LRPILEHF----ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           +F E +Q++G  L+  L+        ++D+  + G + +A NL+       S + W ++V
Sbjct: 164 VF-ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDA-NLVFECMPERSDVTWSSMV 221

Query: 641 S 641
           +
Sbjct: 222 A 222


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 166/481 (34%), Positives = 265/481 (55%), Gaps = 21/481 (4%)

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS-------------------EEAERMFD 319
           G  LH LA++ G   +    NA++ +Y K   S                   E   ++FD
Sbjct: 69  GASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFD 128

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            + ER+++SW  L+ G    G   +A+    +    G   DS  L+TV+   + C++++ 
Sbjct: 129 EMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKR 188

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
           GL++HGFA ++G+ SDV +G++L+D+YA       +  + D    +    +N++L+G  +
Sbjct: 189 GLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQ 248

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
                 E+ + +F +   AG+ P PVTFS L+ +  + A L  G+ LHAY I  G+  +V
Sbjct: 249 N--GSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNV 306

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
            + ++LI MY KCG I  A  IF  +S  D+VSW AM+  YALHG  + AL+LFE M+  
Sbjct: 307 FISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELG 366

Query: 560 GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
              P+ I+ L VL AC ++GL + G   F  +   YG+ P LEHFA + D LGRAG L E
Sbjct: 367 NAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDE 426

Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
           A N I+      +  +W TL+   ++  N+  +   +K++++LEP+  GS +++SNMY+ 
Sbjct: 427 AYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSA 486

Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE 739
            G  +EAA +R +M    + K+  CSWIE+ SKLH FVA  + HP  + I   L+  +++
Sbjct: 487 SGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQ 546

Query: 740 M 740
           M
Sbjct: 547 M 547



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 188/408 (46%), Gaps = 26/408 (6%)

Query: 50  SCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF--- 106
           S + R+ +    P  +K     G   LG ++HA  ++SG+  D F AN L+NLY K    
Sbjct: 42  SAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCS 101

Query: 107 ----------------NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM 150
                              +  +K+FD M+ R  ++W +L+ G  ++G +   LG    M
Sbjct: 102 YLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKM 161

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
            R   + +  T S +L   +   D   G ++H FA ++GF+++VFVG+SLI MY  + C 
Sbjct: 162 CREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMY--ANCT 219

Query: 211 RE--AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
           R   +  VF  L  +D    N ++    + G  E A  +F  +L +   P   TF+++I 
Sbjct: 220 RTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIP 279

Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
           VC     +  GKQLH   +  G    + + ++++ MY K G    A  +FD +S  +++S
Sbjct: 280 VCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVS 339

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSS-CLATVIDGCSVCSNLELGLQ-LHGF 386
           WTA+I GY   G   +A+  F E ++LG    +      V+  CS    ++ G +     
Sbjct: 340 WTAMIMGYALHGPAREALVLF-ERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSM 398

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           +  +G +  +    AL D   + G+L  A   +     K TA   + L
Sbjct: 399 SNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTL 446



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/455 (22%), Positives = 199/455 (43%), Gaps = 28/455 (6%)

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV--ILEACSLLEDRIFGEQIHAF 184
           W   I+    +G +   + +   M  S    +    S+   L++C+ L     G  +HA 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 185 AIKSGFENNVFVGTSLISMYFHSGC-------------------FREAENVFRGLAYKDV 225
           AI+SG   + F   +L+++Y    C                   F     VF  +  +DV
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
              N ++L   + G    A      +    F P+ +T + V+ +  E   V+ G ++HG 
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
           A + G   ++ VG++++ MY     ++ + ++FD +  R+ I W +L++G  ++G   +A
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +  F   L  G+       +++I  C   ++L  G QLH + I  G+  +V + ++L+D+
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           Y K G++  A  + D  S      + A++ G+   +     + +VLF +  L   +P+ +
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGY--ALHGPAREALVLFERMELGNAKPNHI 373

Query: 466 TFSRLLSLSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           TF  +L+  +    + +G +   + S   G    +    AL     + G +D A+     
Sbjct: 374 TFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISK 433

Query: 525 ISDRDIVS-WNAMLSAYALHGLGKGALLLFEEMKR 558
           +  +   S W+ +L A  +H   K  +L  E  K+
Sbjct: 434 MQIKPTASVWSTLLRACRVH---KNTMLAEEVAKK 465


>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
          Length = 656

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 174/582 (29%), Positives = 284/582 (48%), Gaps = 62/582 (10%)

Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV 266
           SG   +A ++F  +  K+V     ++    + G  E A  +F  ++ S   PND+     
Sbjct: 61  SGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFACNAA 120

Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           +  C +   +  G+Q+H LAV+ G   +  +G+ ++ MY + G    A+ +FD +   ++
Sbjct: 121 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 180

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS-------------- 372
           + +T+LIS + R+G    A    ++ L  G+  +   + T++  C               
Sbjct: 181 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKK 240

Query: 373 ------------------------------------VCSNLELGLQLHGFAIKHGYLSDV 396
                                                C ++ LG QLH  AIKH  ++D+
Sbjct: 241 IGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDI 300

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS-----GFMEKIADDEEDVMVL 451
           R+  AL+ +Y + G ++    +L+         +   +S     GF EK        + L
Sbjct: 301 RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEK-------AIAL 353

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
             Q    G  P+   FS +LS  A  A L +G   H  ++K G  +++  GNALI MY+K
Sbjct: 354 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSK 413

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           CG +  A   F  +   D+ SWN+++  +A HG    AL +F +M+  G  PDD + LGV
Sbjct: 414 CGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGV 473

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
           L  C +SG+ E G   F  +   Y   P   H+ACM+D+LGR GR  EA+ +IN  PF  
Sbjct: 474 LMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEP 533

Query: 632 SPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
             L+W+TL++  KL  N     LA+ RL++L  +D+ S++L+SN+YA  G  ++A KVR 
Sbjct: 534 DALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRR 593

Query: 692 TMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
            M++  + K+AGCSWIEI++++H F +    HP S+ IY  L
Sbjct: 594 RMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQML 635



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 230/497 (46%), Gaps = 56/497 (11%)

Query: 100 INLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
           +N   K  RL  A  LFD M  ++ + WTS++ G   +G  E+ L +  DM  S    N+
Sbjct: 55  LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPND 114

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
             C+  L AC+ L     GEQ+H+ A+++GF  + ++G+ LI MY   G    A+ VF  
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG---- 275
           +   DV     +I  + + GE E+A    + +L    +PN++T T +++ C   LG    
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIH 234

Query: 276 ----------------------------------------------VEEGKQLHGLAVKF 289
                                                         +  G+QLH  A+K 
Sbjct: 235 GYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKH 294

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
            ++ +I V NA+++MYG+ G+ EE E M + I   +L+SWT  IS   ++G G KAI   
Sbjct: 295 DLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALL 354

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
            +    G   +    ++V+  C+  ++L+ G+Q H  A+K G  S++  G AL+++Y+K 
Sbjct: 355 CQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKC 414

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G + SAR+  D         +N+++ G  +    D    + +FS+ R  G++PD  TF  
Sbjct: 415 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQH--GDANKALEVFSKMRSNGIKPDDSTFLG 472

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS- 526
           +L +  + + +V    L    +   Y+      +   +I M  + G  D A ++   +  
Sbjct: 473 VL-MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 531

Query: 527 DRDIVSWNAMLSAYALH 543
           + D + W  +L++  LH
Sbjct: 532 EPDALIWKTLLASCKLH 548



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 171/405 (42%), Gaps = 60/405 (14%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+ G+ VH+  +++G   D +  + LI +Y++   L  A+++FD M     + +TSLI
Sbjct: 128 GALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 187

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS--- 188
             +  +G++E        M +   K NEHT + IL AC     R+ G+QIH + IK    
Sbjct: 188 SAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHGYLIKKIGL 243

Query: 189 -------------------GFENNVF--------------------------------VG 197
                              G + N F                                V 
Sbjct: 244 RSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVS 303

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +L+SMY  +G   E E +   +   D+      I    + G  E A  +   + S  F 
Sbjct: 304 NALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFT 363

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           PN Y F++V+S C +   +++G Q H LA+K G   EI  GNA++ MY K G    A   
Sbjct: 364 PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLA 423

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD +   ++ SW +LI G+ + G   KA+  F +    GI  D S    V+ GC+    +
Sbjct: 424 FDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMV 483

Query: 378 ELGLQLHGFAI-KHGYLSDVRLGTALVDIYAKGGDLKSA-RMLLD 420
           E G       I ++ +         ++D+  + G    A RM+ D
Sbjct: 484 EEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIND 528



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 153/345 (44%), Gaps = 60/345 (17%)

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           +G A    VV E    N +V    K G   +A  +FD +  +N+++WT+++SG  R+G  
Sbjct: 40  NGCAESPDVVLECKRLNRLV----KSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRP 95

Query: 343 GKAINGFLEFLDLGICC-DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
             A+  F + ++ G+   D +C A ++  C+    L  G Q+H  A++ G+  D  +G+ 
Sbjct: 96  EAALAMFADMVESGVAPNDFACNAALV-ACADLGALRAGEQVHSLAVRAGFAGDAWIGSC 154

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM-----------------EKIADD 444
           L+++Y++ G L +A+ + D         + +++S F                  + +  +
Sbjct: 155 LIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPN 214

Query: 445 EEDVMVLFS-------QQ---------------------------RLAGMEPDPVTFSRL 470
           E  +  + +       QQ                           R  G++P+    S +
Sbjct: 215 EHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIV 274

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           L    S   +  GR LH  +IK     D+ V NAL++MY + G ++    +   I + D+
Sbjct: 275 LGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDL 331

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           VSW   +SA   +G G+ A+ L  +M  EGF P+  +   VL +C
Sbjct: 332 VSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSC 376



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 125/265 (47%), Gaps = 2/265 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G + LG+ +H   +K     D   +N L+++Y +   ++  + + + +     ++WT+ I
Sbjct: 279 GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAI 338

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
                +G  E  + + C M+      N +  S +L +C+ +     G Q H  A+K G +
Sbjct: 339 SANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCD 398

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           + +  G +LI+MY   G    A   F  +   DV   N +I  + + G++  A  VF  +
Sbjct: 399 SEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM 458

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV-KFGVVREISVGNAIVTMYGKHGM 310
            S+  +P+D TF  V+  C  +  VEEG+    L + ++      S    ++ M G++G 
Sbjct: 459 RSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGR 518

Query: 311 SEEAERMFDAIS-ERNLISWTALIS 334
            +EA RM + +  E + + W  L++
Sbjct: 519 FDEALRMINDMPFEPDALIWKTLLA 543


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 163/457 (35%), Positives = 273/457 (59%), Gaps = 8/457 (1%)

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N ++ MY K G+  +A+ +FD + +RN++SWT +IS Y  +    KA+   +  L  G+ 
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +    ++V+  C    NL    QLH   IK G  SDV + +AL+D+Y++ G+L++A  +
Sbjct: 64  PNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D         +++I++GF +    D ++ + LF + + AG      T + +L      A
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQN--SDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L  GR +H + +K  Y  D+I+ NAL+ MY KCGS++ A  +F  + ++D++SW+ M++
Sbjct: 179 LLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
             A +G  K AL LFE MK  G  P+ ++I+GVL AC ++GL E G+  F+ +++++G+ 
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGID 296

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P  EH+ CM+DLLGRAGRLSEA++LIN        + WR L++  ++  N   +I A+K+
Sbjct: 297 PGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQ 356

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           +L L+P+DAG+++L+SN+YA     ++ A+VR TM +  + KE GCSWIE+  ++H F+ 
Sbjct: 357 ILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFIL 416

Query: 719 SGKDHPESEEIYSKLD-LLNDEMKLKVKDSSAFELQD 754
             + HP+  EI  +L+ L+   M +     + F LQD
Sbjct: 417 GDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQD 453



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 176/352 (50%), Gaps = 11/352 (3%)

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           F+   LI+MY   G   +A++VF  +  ++V     MI  Y+ A  ++ A    V +L  
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              PN +T+++V+  C    G+   +QLH   +K G+  ++ V +A++ +Y + G  E A
Sbjct: 61  GVRPNMFTYSSVLRACD---GLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            R+FD +   +L+ W+++I+G+ ++  G +A+  F      G     + L +V+  C+  
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           + LELG Q+H   +K  Y  D+ L  AL+D+Y K G L+ A  +      K    ++ ++
Sbjct: 178 ALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G  +     E   + LF   ++ G++P+ VT   +L  + S A LV     + +S+K  
Sbjct: 236 AGLAQNGYSKE--ALKLFESMKVLGIKPNYVTIVGVL-FACSHAGLVEEGLYYFHSMKEL 292

Query: 495 YAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           +  D    +   +I +  + G +  A  +   +  + D V+W A+L+A  +H
Sbjct: 293 FGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVH 344



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 162/337 (48%), Gaps = 8/337 (2%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F  N LIN+Y KF  L  AQ +FD M  R+ ++WT++I  Y      +  L     M R 
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 154 EEKFNEHTCSVILEACSLLEDRIFG-EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
             + N  T S +L AC    D +F   Q+H   IK G +++VFV ++LI +Y   G    
Sbjct: 61  GVRPNMFTYSSVLRAC----DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF  +   D+   + +I  + +  + + A  +F  +  + F     T T+V+  C  
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
              +E G+Q+H   +K+   +++ + NA++ MY K G  E+A  +F  + E+++ISW+ +
Sbjct: 177 LALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL-QLHGFAIKHG 391
           I+G  ++G+  +A+  F     LGI  +   +  V+  CS    +E GL   H      G
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFG 294

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
                     ++D+  + G L  A  L++   C+  A
Sbjct: 295 IDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDA 331



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 4/260 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +H  ++K G  +D F  + LI++Y+++  L+ A ++FD M+    + W+S+I G+  +
Sbjct: 83  RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQN 142

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
            D +  L +   M R+     + T + +L AC+ L     G Q+H   +K  ++ ++ + 
Sbjct: 143 SDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILN 200

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +L+ MY   G   +A  VF  +  KDV   + MI    + G S+ A  +F  +     +
Sbjct: 201 NALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIK 260

Query: 258 PNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           PN  T   V+  C     VEEG    H +   FG+         ++ + G+ G   EA  
Sbjct: 261 PNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVD 320

Query: 317 MFDAIS-ERNLISWTALISG 335
           + + +  E + ++W AL++ 
Sbjct: 321 LINEMECEPDAVTWRALLNA 340


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 179/575 (31%), Positives = 304/575 (52%), Gaps = 8/575 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G Q+HA A+  GF  ++ +   LI MY        A +VF  +  ++V     ++  Y +
Sbjct: 23  GLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQ 82

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G ++ +  +   +  S  +PN++TF+  +  C     VE G Q+HG+ VK G      V
Sbjct: 83  EGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVV 142

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA + MY K G    AE++F+ +  RNL+SW A+I+G+   G+G K++  F      G 
Sbjct: 143 GNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGE 202

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR--LGTALVDIYAKGGDLKSA 415
             D     + +  C     +  G Q+H   I  G+   +R  + +A+VD+YAK G L  A
Sbjct: 203 VPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEA 262

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           + + D    K    ++A++ GF ++   +  + M LF Q R +    D    S ++ + A
Sbjct: 263 QKVFDRIEQKNLISWSALIQGFAQE--GNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFA 320

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
             A + +G+ +H Y +K     D+ V N++I MY KCG  + A ++F  +  R++VSW  
Sbjct: 321 DLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTV 380

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++ Y  HGLG+ A+ LF  M+ +G   D+++ L +L AC +SGL       F+ +   +
Sbjct: 381 MITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNH 440

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            ++P +EH+ACMVD+LGRAG+L EA NLI +     +  +W+TL+S  ++  N +     
Sbjct: 441 QMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREV 500

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
            + L  ++  +  +++++SN+YA  G   E  +VR  +    L KEAG SW+EI+ ++H 
Sbjct: 501 GEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHF 560

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAF 750
           F      HP +E+I+  L     EM+ +VK+   +
Sbjct: 561 FYGGDDTHPLTEKIHEML----KEMERRVKEEVGY 591



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 248/499 (49%), Gaps = 14/499 (2%)

Query: 52  SERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV 111
           SER  L     +L++    +G    G  VHA  +  G   D    N+LI++Y K +R+D+
Sbjct: 2   SERQRL----AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDL 57

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           A  +FD ML R+ ++WT+L+ GYL +G+ +  L + C+M  S  K NE T S  L+AC  
Sbjct: 58  ACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGA 117

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
           L     G QIH   +KSGFE    VG + I MY   G    AE VF  + ++++   N M
Sbjct: 118 LGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAM 177

Query: 232 ILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
           I  +   G    +  +F  +      P+++TFT+ +  C     +  G Q+H   +  G 
Sbjct: 178 IAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGF 237

Query: 292 ---VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
              +R I + +AIV +Y K G   EA+++FD I ++NLISW+ALI G+ + G+  +A++ 
Sbjct: 238 PISIRNI-IASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDL 296

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F +  +     D   L+ ++   +  + +E G Q+H + +K     D+ +  +++D+Y K
Sbjct: 297 FRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLK 356

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G  + A  L      +    +  +++G+ +      E  + LF++ +L G+E D V + 
Sbjct: 357 CGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLG--EKAIHLFNRMQLDGIELDEVAYL 414

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS 526
            LLS + S + L+R    +   +   +     + +   ++ +  + G +  A  + + + 
Sbjct: 415 ALLS-ACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMK 473

Query: 527 DRDIVS-WNAMLSAYALHG 544
            +     W  +LSA  +HG
Sbjct: 474 LKPNEGIWQTLLSACRVHG 492



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 193/407 (47%), Gaps = 32/407 (7%)

Query: 35  NPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTF 94
           N K  +A LC +           F+     +K     G ++ G  +H   +KSG +  + 
Sbjct: 85  NAKGSLALLCEMGYSGVKPNEFTFST---SLKACGALGVVENGMQIHGMCVKSGFEWVSV 141

Query: 95  EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE 154
             N  I++Y+K  R+ +A+++F+ M  R+ ++W ++I G+  +G+    L +   M    
Sbjct: 142 VGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQG 201

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV--FVGTSLISMYFHSGCFRE 212
           E  +E T +  L+AC  L     G QIHA  I  GF  ++   + ++++ +Y   G   E
Sbjct: 202 EVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFE 261

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A+ VF  +  K++   + +I  + + G    A  +F  L  S    + +  + ++ V  +
Sbjct: 262 AQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFAD 321

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
              VE+GKQ+H   +K     +ISV N+I+ MY K G++EEAER+F  +  RN++SWT +
Sbjct: 322 LALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVM 381

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS--------------VCSNLE 378
           I+GY + G G KAI+ F      GI  D      ++  CS              +C+N +
Sbjct: 382 ITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQ 441

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +   +  +A              +VDI  + G LK A+ L++    K
Sbjct: 442 MKPNIEHYA-------------CMVDILGRAGQLKEAKNLIENMKLK 475



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 159/305 (52%), Gaps = 5/305 (1%)

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C +N   ++G Q+H  AV  G   ++ + N ++ MYGK    + A  +FD + ERN++SW
Sbjct: 14  CSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSW 73

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           TAL+ GY++ G+   ++    E    G+  +    +T +  C     +E G+Q+HG  +K
Sbjct: 74  TALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVK 133

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            G+     +G A +D+Y+K G +  A  + +    +    +NA+++G   +   +    +
Sbjct: 134 SGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE--GNGRKSL 191

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV--IVGNALIT 507
           VLF + +  G  PD  TF+  L    +   +  G  +HA  I  G+   +  I+ +A++ 
Sbjct: 192 VLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVD 251

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
           +YAKCG +  A ++F  I  ++++SW+A++  +A  G    A+ LF ++ RE  +  D  
Sbjct: 252 LYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQL-RESVSNVDGF 310

Query: 568 ILGVL 572
           +L ++
Sbjct: 311 VLSIM 315



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 142/281 (50%), Gaps = 8/281 (2%)

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           LA ++  CS     + GLQ+H  A+  G+  D+ +   L+D+Y K   +  A  + D   
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    + A++ G++++   + +  + L  +   +G++P+  TFS  L    +   +  G
Sbjct: 67  ERNVVSWTALMCGYLQE--GNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG 124

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             +H   +K+G+    +VGNA I MY+KCG I  A Q+F  +  R++VSWNAM++ +   
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ---IYGLRPI 600
           G G+ +L+LF+ M+ +G  PD+ +    L+AC   G   GG  +   +        +R I
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +   + +VDL  + G L EA  + +     ++ + W  L+ 
Sbjct: 245 IA--SAIVDLYAKCGYLFEAQKVFDRIE-QKNLISWSALIQ 282



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
            ++LL   +      +G  +HA ++  G+  D+I+ N LI MY KC  +D A  +F  + 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           +R++VSW A++  Y   G  KG+L L  EM   G  P++ +    L+AC   G+ E G+ 
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGM- 125

Query: 587 LFNEIEQIYGL--RPILEHFACM----VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
                 QI+G+  +   E  + +    +D+  + GR+  A  + N  PF  + + W  ++
Sbjct: 126 ------QIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPF-RNLVSWNAMI 178

Query: 641 SVSKLMANSKFSILASKRL 659
           +      N + S++  +R+
Sbjct: 179 AGHTHEGNGRKSLVLFQRM 197


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 196/629 (31%), Positives = 309/629 (49%), Gaps = 80/629 (12%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRG--LAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           + ++   T+LI+ Y  +G  + +  +F    L  +D    N MI  Y+   +   A  +F
Sbjct: 76  QPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELF 135

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGK---QLHGLAVKFGVVREISVGNAIVTMY 305
             +   +F P++YTFT+V+      L  E+ K   QLH   VK G     SV NA+++ Y
Sbjct: 136 CDMQRDNFRPDNYTFTSVLGAL--ALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSY 193

Query: 306 GK---------HGMSEEAERMFDAISERNLISWTALISGYVRS----------------- 339
            K           +  EA ++FD +  R+ +SWT +I+GYV++                 
Sbjct: 194 VKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKL 253

Query: 340 -----------GHGGKAINGFLEFLDL---GICCDSSCLATVIDGCSVCSNLELGLQLHG 385
                       H G  +  F  F  +    I  D     +VI  C+      LG ++H 
Sbjct: 254 GVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHA 313

Query: 386 FAIKH--GYLSDVRL--GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           + +K       DV +    AL+  Y K G +  A+ + +    +    +N ILSG++   
Sbjct: 314 YFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVR 373

Query: 442 ADDE-----------------------------EDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             DE                             E+ +  F++ +L G EP    F+  + 
Sbjct: 374 CMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAII 433

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
             +    L  GR LHA  ++ GY + +  GNALITMYA+CG +D A  +F  +   D +S
Sbjct: 434 SCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAIS 493

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           WNAM++A   HG G  A+ LFEEM +EG  PD IS L V+ AC ++GL + G   F+ + 
Sbjct: 494 WNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMH 553

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
            +YG+ P  EH+A ++DLL RAG+ SEA  ++ S PF     +W  L++  ++  N    
Sbjct: 554 NVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLG 613

Query: 653 ILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
           I A++RL +L+P+  G+++L+SNMYA  G  ++ AKVR  M D  + KE GCSWIE+++K
Sbjct: 614 IEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENK 673

Query: 713 LHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +H F+    +HPE  +IY+ L+ L  EM+
Sbjct: 674 VHSFLVGDANHPEVRQIYNYLEQLVLEMR 702



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 133/584 (22%), Positives = 235/584 (40%), Gaps = 121/584 (20%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML--------------- 120
           L + VHA ++ SG Q      N LI++Y+K ++L+ A+ LFD +                
Sbjct: 31  LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS 90

Query: 121 ------------------VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC 162
                             +R ++ + ++I  Y  + D  + + + CDM R   + + +T 
Sbjct: 91  AAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTF 150

Query: 163 SVILEACSLL-EDRIFGEQIHAFAIKS--GFENNVFVG---------------------- 197
           + +L A +L+ E     +Q+H   +KS  GF  +V                         
Sbjct: 151 TSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAE 210

Query: 198 ----------------TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
                           T++I+ Y  +     A+    G + K     N MI  Y   G  
Sbjct: 211 ARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLY 270

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF----GVVREISV 297
             AF +F  ++ S  + +++TFT+VISVC        GK++H   +K          + V
Sbjct: 271 LEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPV 330

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA++T Y K G  + A+ +F+ + ER+L+SW  ++SGYV      +A + F E  +  I
Sbjct: 331 NNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNI 390

Query: 358 C--------------------------------CDSSCLATVIDGCSVCSNLELGLQLHG 385
                                            CD +  A  I  CSV  +L+ G QLH 
Sbjct: 391 LSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYA-FAGAIISCSVLGSLKHGRQLHA 449

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
             +++GY S +  G AL+ +YA+ G + +A  L     C     +NA+++   +      
Sbjct: 450 QVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQH--GQG 507

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR----SLHAYSIKTGYAADVIV 501
              + LF +    G+ PD ++F  ++S  +    +  GR    S+H      G   D   
Sbjct: 508 TQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNV---YGVNPDEEH 564

Query: 502 GNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
              +I +  + G    A ++ + +  +     W A+L+   +HG
Sbjct: 565 YARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHG 608



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 63/322 (19%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKS---GSQNDTFEANN-LINLYAKFNRLDVAQKLFDGM 119
           ++ +   +G  +LG+ +HA+ LK+    + +     NN LI  Y K  ++D+AQ++F+ M
Sbjct: 295 VISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKM 354

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE------------ 167
             R  ++W  ++ GY++         + C M  ++  FNE     IL             
Sbjct: 355 PERDLVSWNIILSGYVN---------VRC-MDEAKSFFNEMPEKNILSWIIMISGLAQIG 404

Query: 168 -----------------------------ACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
                                        +CS+L     G Q+HA  ++ G+E+++  G 
Sbjct: 405 FAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGN 464

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +LI+MY   G    A  +F  +   D    N MI    + G+   A  +F  +L     P
Sbjct: 465 ALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILP 524

Query: 259 NDYTFTNVISVCYENLGVEEGKQ----LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
           +  +F  VIS C     V+EG++    +H +   +GV  +      I+ +  + G   EA
Sbjct: 525 DRISFLTVISACSHAGLVKEGRKYFDSMHNV---YGVNPDEEHYARIIDLLCRAGKFSEA 581

Query: 315 ERMFDAIS-ERNLISWTALISG 335
           + + +++  E     W AL++G
Sbjct: 582 KEVMESMPFEPGAPIWEALLAG 603



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 6/119 (5%)

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G +P     +RL+ + +  + L   R    Y        D++    LI  Y+  G +  
Sbjct: 42  SGFQPRGHILNRLIDIYSKSSKLNYAR----YLFDEIPQPDIVARTTLIAAYSAAGDLKL 97

Query: 518 AFQIFKG--ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           + +IF    +  RD V +NAM++AY+ +  G  A+ LF +M+R+ F PD+ +   VL A
Sbjct: 98  SRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGA 156


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 199/678 (29%), Positives = 325/678 (47%), Gaps = 100/678 (14%)

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGL 220
           C  +L++     D   G  IHA  IK G     VF+  +L+++Y  +G   +A  +F  +
Sbjct: 15  CVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEM 74

Query: 221 AYKDVRCVNF-------------------------------MILEYNKAGESEMAFHVFV 249
             K     N                                MI+ YN  G  + A H F+
Sbjct: 75  PLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFL 134

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            ++SS   P  +TFTNV++ C     ++ GK++H   VK G    + V N+++ MY K G
Sbjct: 135 RMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCG 194

Query: 310 MSEEA----ERM---------------------------FDAISERNLISWTALISGYVR 338
            S  A    +RM                           FD +++ +++SW ++I+GY  
Sbjct: 195 DSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCH 254

Query: 339 SGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
            G+  +A+  F   L    +  D   L +V+  C+   +L+LG Q+H   ++        
Sbjct: 255 QGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGA 314

Query: 398 LGTALVDIYAKGG---------------------------------DLKSARMLLDGFSC 424
           +G AL+ +YAK G                                 D+  AR + D    
Sbjct: 315 VGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKH 374

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           +    + A++ G+ +       D +VLF      G +P+  T + +LS+ +S A L  G+
Sbjct: 375 RDVVAWTAMIVGYAQN--GLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGK 432

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALH 543
            LHA +I+    + V VGNALITMY++ GSI  A +IF  I S RD ++W +M+ + A H
Sbjct: 433 QLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQH 492

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           GLG  A+ LFE+M R    PD I+ +GVL AC + GL E G   FN ++ ++ + P   H
Sbjct: 493 GLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSH 552

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           +ACM+DLLGRAG L EA N I + P     + W +L+S  ++      + +A+++LL ++
Sbjct: 553 YACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLID 612

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P ++G+++ ++N  +  G  ++AAKVR +M D  + KE G SW++I +K+H F      H
Sbjct: 613 PNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALH 672

Query: 724 PESEEIYSKLDLLNDEMK 741
           P+ + IY  +  +  E+K
Sbjct: 673 PQRDAIYCMISKIWKEIK 690


>gi|357114780|ref|XP_003559172.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 846

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 201/694 (28%), Positives = 347/694 (50%), Gaps = 31/694 (4%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           LG+  H+ +L++G +   F  NNL+ +Y +   +  A+ LFDGM  R A+TW +LI GY 
Sbjct: 70  LGKLTHSHMLRAGYRPGLFLRNNLLAVYCRCGDMRHARLLFDGMPRRDAVTWNTLIAGYS 129

Query: 136 DDGDY--------ESVLGIAC--DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
                         + L +A   D  R     +  T + +L AC    D   G   H   
Sbjct: 130 SSSGGGGSTGGGATTRLALAAFRDARRDGVAVDRFTYAAVLAACGGAGDGRHGRAAHGMV 189

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           + SG     F+  S+I MY   G   E   VF     +D    N ++  Y + G  E+A 
Sbjct: 190 VASGLAETAFLTNSVIDMYAKCGMIDEVRLVFDRAEERDEASWNLLLSAYVRMGWPEVAV 249

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTM 304
           HV V +  S  + + +    ++  C E  G E+ ++ LHG  VK G+  ++ VG+A+V M
Sbjct: 250 HVLVWMHRSGVKLDSFALGGILKACSELEGSEDVRRMLHGCVVKVGLDLDMFVGSAMVDM 309

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG------KAINGFLEFLDLGIC 358
           Y K+G  EEA ++FD I  +N++ ++A+I+G+ R G+        +AI  F   L + I 
Sbjct: 310 YAKNGGLEEAIKVFDCIPNQNVVVYSAMIAGFARLGNDPCPEIRIEAIRLFSNLLRMRIK 369

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
                  +V++ C++ + L  G Q+H   I +G+  D  +   L+++Y+K      AR +
Sbjct: 370 PSRFTFKSVLEVCNLTNALHCGRQIHAHVIFNGFQEDEFIANVLINLYSK------ARSV 423

Query: 419 LDGFSCKYTAEFNAILS--GFMEKIADDE--EDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
            D   C +      + +    +   AD+E  E  + LF +    G EPD  T S +++  
Sbjct: 424 NDSLRCFHMTPKQDVFTWTSMITAFADNENFEKSLDLFIELLNVGNEPDQFTLSNVMNAC 483

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           A+ +  V  + +H Y++K+G     + GN+ I MY   G +  + + F+ I+  D +SW+
Sbjct: 484 AALSIPVTCKQIHCYTVKSGLDQFTVCGNSQIAMYRSMGDLKASKKTFEQITCLDTLSWS 543

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
            M+ +YA+HG    ALLL ++MK      +DI+ L VL AC   GL++ G   ++ ++  
Sbjct: 544 TMVLSYAVHGHENEALLLLQKMKDCRVGINDIAFLAVLIACSQLGLADEGFRHYDSMKSE 603

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           +G  P  +H A +VDLL R G+++EA + I  S     P+LW  L+   ++  + +  I 
Sbjct: 604 HGCAPNSKHKASVVDLLCRVGKIAEAEDFILRSGSENDPILWHALLRACRIHGDKERGIK 663

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
             ++L++LEP  A S++++ N+Y   G +  A + R  M +  +SKE G SW E    +H
Sbjct: 664 TGEKLMELEPFAARSYVVLYNLYMDAGKISLAMRTRGLMRERGMSKETGISWAEFGGSIH 723

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSS 748
            F        ++  ++++L    +E+ ++VK  +
Sbjct: 724 CFADGDNSCLQNTAVHTRL----EELLIRVKQKT 753


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 185/616 (30%), Positives = 315/616 (51%), Gaps = 66/616 (10%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             N F   SL+S+Y  SG   +A  VF  +  +D      MI+  N++G    A   F+ 
Sbjct: 278 RRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLD 337

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++S  F P+ +T TNV+S C        G+++H   VK G+   + V N+++ MYGK G 
Sbjct: 338 MVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGD 397

Query: 311 SEEA----ERM---------------------------FDAISERNLISWTALISGYVRS 339
           +E A    ERM                           F+ + ER+++SW  +I+GY ++
Sbjct: 398 AETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQN 457

Query: 340 GHGGKAINGFLEFLDLG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           G  G A+  F   L    +  D+  + +V+  C+    L++G Q+H + ++ G     ++
Sbjct: 458 GLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQI 517

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCK--YTAEFNAILSGFMEKIADDEE---------- 446
             AL+  YAK G +++AR ++D           F A+L G++ K+ D ++          
Sbjct: 518 MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYV-KLGDTKQAREIFDIMNN 576

Query: 447 --------------------DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
                               + M LF    L G EP+  T + +LS  AS A L  G+ +
Sbjct: 577 RDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQI 636

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGL 545
           H  +I++     V V NA+IT+YA+ GS+  A ++F  I  R + ++W +M+ A A HGL
Sbjct: 637 HCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGL 696

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
           G+ A++LFEEM R G  PD I+ +GVL AC ++G  + G   + +++  +G+ P + H+A
Sbjct: 697 GEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYA 756

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           CMVDL  RAG L+EA   I   P +   ++W +L++  ++  N+  + LA+ +LL ++P 
Sbjct: 757 CMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPH 816

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPE 725
           ++G++  ++N+Y+  G  ++AA++     D  + KE G SW  +  K+H F A    HP+
Sbjct: 817 NSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQ 876

Query: 726 SEEIYSKLDLLNDEMK 741
            + IY K   + +E+K
Sbjct: 877 RDSIYRKAAEMWEEIK 892



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/582 (22%), Positives = 243/582 (41%), Gaps = 130/582 (22%)

Query: 76  LGQAVHAFLLKSG----------------------SQNDTFEA---------NNLINLYA 104
           +G+ VH F++K G                      +    FE          N +++LY 
Sbjct: 365 VGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYT 424

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG-DYESVLGIACDMYRSEEKFNEHTCS 163
              R+++A  +F+ M+ RS ++W ++I GY  +G D  ++   +  +  S  + +  T +
Sbjct: 425 HQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVT 484

Query: 164 VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF------------- 210
            +L AC+ L     G+Q+H++ +++G   +  +  +LIS Y  SG               
Sbjct: 485 SVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVA 544

Query: 211 --------------------REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
                               ++A  +F  +  +DV     MI+ Y++ G+++ A  +F  
Sbjct: 545 DLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRS 604

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++    EPN +T   V+S C     ++ GKQ+H  A++    + +SV NAI+T+Y + G 
Sbjct: 605 MILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGS 664

Query: 311 SEEAERMFDAISERN-LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              A R+FD I  R   I+WT++I    + G G +A+  F E + +G+  D      V+ 
Sbjct: 665 VPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLS 724

Query: 370 GCSVCSNLELGLQLH-GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
            C+    ++ G + +     +HG +  +     +VD++A+ G L  A   +         
Sbjct: 725 ACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFI--------- 775

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
                                     QR+  + PD V +  LL+     AC VR ++   
Sbjct: 776 --------------------------QRMP-VAPDTVVWGSLLA-----ACRVR-KNADL 802

Query: 489 YSIKTGYAADVIVGN-----ALITMYAKCGSIDGAFQIF-----KGISDRDIVSWNAMLS 538
             +  G    +   N     AL  +Y+ CG  + A +I+     KG+      SW  +  
Sbjct: 803 AELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRG 862

Query: 539 AYALHG-----------LGKGALLLFEEMKREGFAPDDISIL 569
              + G           + + A  ++EE+K+ GF PD  S+L
Sbjct: 863 KVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVL 904



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/484 (21%), Positives = 196/484 (40%), Gaps = 113/484 (23%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVV------------------------------ 292
           +  ++ +C   +    G+ +H  AVK G++                              
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271

Query: 293 -------REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
                  R     N+++++Y K G   +A  +F  + +R+ +SWT +I G  RSG    A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +  FL+ +  G       L  V+  C+      +G ++H F +K G  S V +  +++ +
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILS-----GFMEKIADDEED-----------VM 449
           Y K GD ++AR + +    +  + +N ++S     G ME      E+           ++
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTII 451

Query: 450 VLFSQQRLAG--------------MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
             ++Q  L G              MEPD  T + +LS  A+   L  G+ +H+Y ++TG 
Sbjct: 452 AGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGM 511

Query: 496 AADVIVGNALITMYAKCGSIDG---------------------------------AFQIF 522
                + NALI+ YAK GS++                                  A +IF
Sbjct: 512 PCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIF 571

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             +++RD+++W AM+  Y  +G    A+ LF  M   G  P+  ++  VL AC       
Sbjct: 572 DIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSAC------- 624

Query: 583 GGICLFNEIEQIY--GLRPILEHFA----CMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
             +   +  +QI+   +R + E        ++ +  R+G +  A  + +   + +  + W
Sbjct: 625 ASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITW 684

Query: 637 RTLV 640
            +++
Sbjct: 685 TSMI 688



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 138/298 (46%), Gaps = 36/298 (12%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV------------ 121
           LK+G+ +H+++L++G    +   N LI+ YAK   ++ A+++ D  +V            
Sbjct: 496 LKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALL 555

Query: 122 ---------------------RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
                                R  I WT++I GY  +G  +  + +   M     + N H
Sbjct: 556 EGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSH 615

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T + +L AC+ L    +G+QIH  AI+S  E +V V  ++I++Y  SG    A  VF  +
Sbjct: 616 TLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQI 675

Query: 221 AY-KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
            + K+      MI+   + G  E A  +F  ++    +P+  T+  V+S C     V++G
Sbjct: 676 CWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKG 735

Query: 280 KQLH-GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
           K+ +  +  + G+V ++S    +V ++ + G+  EA      +    + + W +L++ 
Sbjct: 736 KRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 171/582 (29%), Positives = 294/582 (50%), Gaps = 34/582 (5%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + N+F   +L+S   HS    + E +F  +  +D    N +I  ++  G    +  ++  
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 251 LLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           LL  +   P   T + +I V         G  +H   ++ G      VG+ +V MY K G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195

Query: 310 MSEEAERMFDAIS-------------------------------ERNLISWTALISGYVR 338
           +  +A R+F  +                                +R+ I+WT +++G  +
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G   +A++ F      G+  D     +++  C   + LE G Q+H +  +  Y  +V +
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFV 315

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           G+ALVD+Y+K   ++ A  +    +C+    + A++ G+ +    +E   +  FS+ ++ 
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEE--AVRAFSEMQMD 373

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G++PD  T   ++S  A+ A L  G   H  ++ +G    + V NAL+T+Y KCGSI+ A
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F  +S  D VSW A+++ YA  G  K  + LFE+M   G  PD ++ +GVL AC  +
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRA 493

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           GL E G   F+ +++ +G+ PI +H+ CM+DL  R+GR  EA   I   P S     W T
Sbjct: 494 GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+S  +L  N +    A++ LL+ +P++  S++L+ +M+A +G   E A +R  M D ++
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
            KE GCSWI+  +K+H F A  + HP S  IY KL+ LN +M
Sbjct: 614 KKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 190/384 (49%), Gaps = 32/384 (8%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK------------------ 105
           ++ ++    D  LG +VH  +L+ G     F  + L+++YAK                  
Sbjct: 152 MIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKT 211

Query: 106 ---FNRL----------DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
              +N L          + A+ LF  M+ R +ITWT+++ G   +G     L +   M  
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
                +++T   IL AC  L     G+QIHA+  ++ +E+NVFVG++L+ MY      R 
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           AE VFR +  +++     MI+ Y +   SE A   F  +     +P+D+T  +VIS C  
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
              +EEG Q H LA+  G++R I+V NA+VT+YGK G  E+A R+FD +S  + +SWTAL
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HG 391
           ++GY + G   + I+ F + L  G+  D      V+  CS    +E G        K HG
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG 511

Query: 392 YLSDVRLGTALVDIYAKGGDLKSA 415
            +      T ++D+Y++ G  K A
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEA 535



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 242/550 (44%), Gaps = 73/550 (13%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQKLFDGM--------- 119
           G   +++  AVH  +LK+  Q   TF  N+L+  YAK  RL  A+++FD M         
Sbjct: 24  GRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRN 83

Query: 120 ----------LV------------RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE-K 156
                     LV            R A+++ +LI G+   G     + +   + R E  +
Sbjct: 84  ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
               T S ++   S L DR  G  +H   ++ GF    FVG+ L+ MY   G  R+A  V
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203

Query: 217 FRGLAYKDV-----------RC--------------------VNFMILEYNKAGESEMAF 245
           F+ +  K V           RC                       M+    + G    A 
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            VF  + +     + YTF ++++ C     +EEGKQ+H    +      + VG+A+V MY
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K      AE +F  ++ RN+ISWTA+I GY ++    +A+  F E    GI  D   L 
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +VI  C+  ++LE G Q H  A+  G +  + +  ALV +Y K G ++ A  L D  S  
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               + A+++G+ +      ++ + LF +    G++PD VTF  +LS + S+A LV    
Sbjct: 444 DQVSWTALVTGYAQ--FGKAKETIDLFEKMLANGLKPDGVTFIGVLS-ACSRAGLVEKGC 500

Query: 486 LHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYAL 542
            +  S++  +    I  +   +I +Y++ G    A +  K +    D   W  +LS+  L
Sbjct: 501 DYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560

Query: 543 HG---LGKGA 549
            G   +GK A
Sbjct: 561 RGNMEIGKWA 570


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 213/691 (30%), Positives = 359/691 (51%), Gaps = 23/691 (3%)

Query: 61  WPQLVKISIGSGD-LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           +P +++   GS + L +G  VH  ++K G  +D     +L+ +Y +   L  A+K+FDGM
Sbjct: 103 FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM 162

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
            VR  + W++L+   L++G+    L +   M     + +  T   ++E C+ L       
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            +H    +  F+ +  +  SL++MY   G    +E +F  +A K+      MI  YN+  
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI---- 295
            SE A   F  ++ S  EPN  T  +V+S C     + EGK +HG AV+    RE+    
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR----RELDPNY 338

Query: 296 -SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
            S+  A+V +Y + G   + E +   +S+RN+++W +LIS Y   G   +A+  F + + 
Sbjct: 339 ESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             I  D+  LA+ I  C     + LG Q+HG  I+   +SD  +  +L+D+Y+K G + S
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDS 457

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A  + +    +    +N++L GF +    +  + + LF     + +E + VTF  ++   
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQN--GNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           +S   L +G+ +H   I +G   D+    ALI MYAKCG ++ A  +F+ +S R IVSW+
Sbjct: 516 SSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS 574

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           +M++AY +HG    A+  F +M   G  P+++  + VL AC +SG  E G   FN ++  
Sbjct: 575 SMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS- 633

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           +G+ P  EHFAC +DLL R+G L EA   I   PF     +W +LV+  ++  + K  I+
Sbjct: 634 FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRI--HQKMDII 691

Query: 655 ASKR--LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
            + +  L D+   D G + L+SN+YA +G  +E  ++R+ M    L K  G S IEID K
Sbjct: 692 KAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQK 751

Query: 713 LHHFVASGKDHPESEEIYSKL----DLLNDE 739
           +  F A  ++  +++EIY  L    +L N+E
Sbjct: 752 VFRFGAGEENRIQTDEIYRFLGNLQNLTNEE 782



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 274/554 (49%), Gaps = 16/554 (2%)

Query: 74  LKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           L+L   +HA LL +G  + D      LI  YA     D ++ +F+      +  +  LIK
Sbjct: 14  LRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIK 73

Query: 133 GYLDDGDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRI-FGEQIHAFAIK 187
             +    +  +L  A D+Y        + ++     +L AC+   + +  G ++H   IK
Sbjct: 74  CNV----WCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIK 129

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G +++  + TSL+ MY  +G   +AE VF G+  +D+   + ++    + GE   A  +
Sbjct: 130 GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRM 189

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  ++    EP+  T  +V+  C E   +   + +HG   +     + ++ N+++TMY K
Sbjct: 190 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSK 249

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G    +ER+F+ I+++N +SWTA+IS Y R     KA+  F E +  GI  +   L +V
Sbjct: 250 CGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSV 309

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           +  C +   +  G  +HGFA++     +   L  ALV++YA+ G L     +L   S + 
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN 369

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N+++S +  +    +   + LF Q     ++PD  T +  +S   +   +  G+ +
Sbjct: 370 IVAWNSLISLYAHRGMVIQ--ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H + I+T   +D  V N+LI MY+K GS+D A  +F  I  R +V+WN+ML  ++ +G  
Sbjct: 428 HGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNS 486

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             A+ LF+ M       ++++ L V+QAC   G  E G  + +++  I GL+ +    A 
Sbjct: 487 VEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL-IISGLKDLFTDTA- 544

Query: 607 MVDLLGRAGRLSEA 620
           ++D+  + G L+ A
Sbjct: 545 LIDMYAKCGDLNAA 558


>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 196/682 (28%), Positives = 354/682 (51%), Gaps = 24/682 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G+  LG  +H F++ +G  +    +N+L+ +Y K  R ++A  +F+G+     ++W +++
Sbjct: 98  GEFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTIL 157

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDR--IFGEQIHAFAI 186
            G+    D    L  AC M+ +   F+  T +  L  C      +D   +FG Q+H+  +
Sbjct: 158 SGFEKSVD---ALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVV 214

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE--MA 244
           K GF   VF+G +L++MY   G   EA  VF  +  +D+   N M+  Y + GE     A
Sbjct: 215 KCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEA 274

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             +F +++      +  + T  IS C     +E GKQ+HGLA K G    ++V N +++ 
Sbjct: 275 VLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLIST 334

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K  +  +A+ +F  +S RN++SWT LIS    +      ++ F      G+  +    
Sbjct: 335 YSKCKVLRDAKAVFQDMSARNVVSWTTLISIDEEN-----VVSLFNAMRVDGVYPNDVTF 389

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
             ++   ++ + ++ GL +HG  +K    S+  +  +L+ +YAK   ++ ++ + +  + 
Sbjct: 390 IGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNY 449

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL--SASQACLVR 482
           + T  +NA++SG+ +     E  +  L + + +   +P+  TF  +L+   +A    L  
Sbjct: 450 QGTISWNALISGYAQNGLCKEAFLTFLSAIKEI---KPNQYTFGSVLNAIAAAEDISLKH 506

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+  H++ IK G   D  V  AL+ MY K G+I+ + ++F    ++   SW  M+SAYA 
Sbjct: 507 GQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYAR 566

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG  +  + L++E++REG   D I+ L VL AC   G+ + G  +F+ + + + + P  E
Sbjct: 567 HGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPE 626

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H++ MVD+LGR GRL EA  L++  P      + ++L+   KL  N + +      L+ +
Sbjct: 627 HYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDSLIQM 686

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE---IDS-KLHHFVA 718
           +P  +G ++L++N+YA +G  ++ A+VR  M    + KE G SW++   +DS  LH F +
Sbjct: 687 DPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGFSWVDVANVDSLHLHGFSS 746

Query: 719 SGKDHPESEEIYSKLDLLNDEM 740
             K HPESE I    + L  +M
Sbjct: 747 GDKSHPESETIDRMAEFLGLQM 768



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D VT +  LS  A +   + G  +H + + TG+ + V V N+L+ MY K G  + A  +F
Sbjct: 85  DEVTLA--LSFKACRGEFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVF 142

Query: 523 KGISDRDIVSWNAMLSAY 540
           +G+S  DIVSWN +LS +
Sbjct: 143 EGLSCPDIVSWNTILSGF 160


>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
          Length = 641

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 164/485 (33%), Positives = 289/485 (59%), Gaps = 5/485 (1%)

Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
            N    EG   H   ++ G+  +    N ++ MY K G+ E A ++FD +  R+L+SW  
Sbjct: 59  RNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNT 118

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV-CSNLELGLQLHGFAIKH 390
           ++  + ++G   KA+  F++    GI C    +++V+  C+  C   E   QLHGFA+K 
Sbjct: 119 MVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECK-QLHGFALKT 177

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
              S+V +GTAL+D+YAK G +K A ++ +    +    ++++++G+++   +  E+ +V
Sbjct: 178 ALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQN--ELYEEALV 235

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           LF + +  G+E +  T S  LS  A++A L+ G+ + A   KTG  +++ V ++LI MYA
Sbjct: 236 LFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYA 295

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG I+ A+ +F  + ++++V WNAMLS ++ H     A++ FE+M++ G  P++I+ + 
Sbjct: 296 KCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYIS 355

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
           VL AC + GL E G   F+ + +++ + P + H++CMVD+LGRAG L EA +LI+  PF 
Sbjct: 356 VLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFD 415

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
            +  +W +L++  ++  N + + +A+K L ++EP +AG+ +L+SN+YA     +E A+ R
Sbjct: 416 ATASMWGSLLASCRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARAR 475

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLLNDEMKLKVKDSSA 749
             + + +  KE G SWIEI  K+H F+   ++HP   EIY KL DL+ +  K+  K  + 
Sbjct: 476 NLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTE 535

Query: 750 FELQD 754
            +L D
Sbjct: 536 HDLHD 540



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 208/417 (49%), Gaps = 16/417 (3%)

Query: 24  KKKVPINTFSPNPKSQVAYLCSISSVSCSE-----------RTLLFNDWPQLVKISIGSG 72
           K+K+  N+FS     QV +L +I +                R    ++   L++ S  + 
Sbjct: 6   KQKILCNSFSL----QVRHLLAIXNAXAERPSSKELVWVGIRATHVSELQHLLQSSARNR 61

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
               G A HA +++ G + DT  +N L+N+Y+K   ++ A+KLFD M VRS ++W +++ 
Sbjct: 62  AAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVG 121

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
            +  +GD E  L +   M +     +E T S ++ AC+        +Q+H FA+K+  ++
Sbjct: 122 SHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDS 181

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           NVFVGT+L+ +Y   G  ++A  VF  +  +     + M+  Y +    E A  +F    
Sbjct: 182 NVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQ 241

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +   E N +T ++ +S C     + EGKQ+  +  K G+   I V ++++ MY K G+ E
Sbjct: 242 AMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIE 301

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA  +F ++ E+N++ W A++SG+ R     +A+  F +   +GIC +     +V+  CS
Sbjct: 302 EAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACS 361

Query: 373 VCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
               +E G +     I+ H    +V   + +VDI  + G L  A+ L+D      TA
Sbjct: 362 HLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATA 418



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 182/366 (49%), Gaps = 4/366 (1%)

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
           I G   HA  I+ G   +      L++MY   G    A  +F  +  + +   N M+  +
Sbjct: 64  IEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSH 123

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G+SE A  +F+ +       +++T ++V+  C     V E KQLHG A+K  +   +
Sbjct: 124 TQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNV 183

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VG A++ +Y K G+ ++A  +F+ + ER+ ++W+++++GYV++    +A+  F     +
Sbjct: 184 FVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  +   +++ +  C+  + L  G Q+     K G  S++ + ++L+D+YAK G ++ A
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEA 303

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
            ++      K    +NA+LSGF   +   E   M+ F + +  G+ P+ +T+  +L+  +
Sbjct: 304 YIVFSSVEEKNVVLWNAMLSGFSRHVRSLE--AMIYFEKMQQMGICPNEITYISVLTACS 361

Query: 476 SQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSW 533
               + +GR      I+    + +V+  + ++ +  + G +  A  +   +  D     W
Sbjct: 362 HLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMW 421

Query: 534 NAMLSA 539
            ++L++
Sbjct: 422 GSLLAS 427



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 14/181 (7%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
              LL  SA     + G + HA  I+ G  AD I  N L+ MY+KCG ++ A ++F  + 
Sbjct: 50  LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 109

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
            R +VSWN M+ ++  +G  + AL+LF +M++EG +  + ++  V+ AC          C
Sbjct: 110 VRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCAC------AAKCC 163

Query: 587 LFNEIEQIYG--LRPILEHF----ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           +F E +Q++G  L+  L+        ++D+  + G + +A  +    P   S + W ++V
Sbjct: 164 VF-ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMP-ERSDVTWSSMV 221

Query: 641 S 641
           +
Sbjct: 222 A 222


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 163/484 (33%), Positives = 288/484 (59%), Gaps = 5/484 (1%)

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
           N    EG   H   ++ G+  +    N ++ MY K G+ E A ++FD +  R+L+SW  +
Sbjct: 33  NRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTM 92

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV-CSNLELGLQLHGFAIKHG 391
           +  + ++G   KA+  F++    G  C    +++V+  C+  C   E   QLHGFA+K  
Sbjct: 93  VGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK-QLHGFALKTA 151

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
             S+V +GTAL+D+YAK G +K A ++ +    +    ++++++G+++   +  E+ +VL
Sbjct: 152 LDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN--ELYEEALVL 209

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           F + +  G+E +  T S  LS  A++A L+ G+ + A S KTG  +++ V ++LI MYAK
Sbjct: 210 FHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAK 269

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
           CG I+ A+ +F  + ++++V WNA+LS ++ H     A++ FE+M++ G  P+DI+ + V
Sbjct: 270 CGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISV 329

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
           L AC + GL E G   F+ + +++ + P + H++CMVD+LGRAG L EA + I+  PF  
Sbjct: 330 LSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDA 389

Query: 632 SPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
           +  +W +L++  ++  N + + +A+K L ++EP +AG+ +L+SN+YA     +E A+ R 
Sbjct: 390 TASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARN 449

Query: 692 TMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLLNDEMKLKVKDSSAF 750
            + + +  KE G SWIEI  K+H F+   ++HP   EIY KL DL+ +  K+  K  +  
Sbjct: 450 LLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEH 509

Query: 751 ELQD 754
           +L D
Sbjct: 510 DLHD 513



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 185/353 (52%), Gaps = 1/353 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G A HA +++ G + DT  +N L+N+Y+K   ++ A+KLFD M VRS ++W +++  +  
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +GD E  L +   M +     +E T S ++ AC+        +Q+H FA+K+  ++NVFV
Sbjct: 99  NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 158

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
           GT+L+ +Y   G  ++A  VF  +  +     + M+  Y +    E A  +F    +   
Sbjct: 159 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 218

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           E N +T ++ +S C     + EGKQ+  ++ K G+   I V ++++ MY K G+ EEA  
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F ++ E+N++ W A++SG+ R     +A+  F +   +GIC +     +V+  CS    
Sbjct: 279 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 338

Query: 377 LELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           +E G +     I+ H    +V   + +VDI  + G L  A+  +D      TA
Sbjct: 339 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATA 391



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 158/309 (51%), Gaps = 2/309 (0%)

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
           I G   HA  I+ G   +      L++MY   G    A  +F  +  + +   N M+  +
Sbjct: 37  IEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSH 96

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G+ E A  +F+ +       +++T ++V+  C     V E KQLHG A+K  +   +
Sbjct: 97  TQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNV 156

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VG A++ +Y K G+ ++A  +F+ + ER+ ++W+++++GYV++    +A+  F     +
Sbjct: 157 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 216

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  +   +++ +  C+  + L  G Q+   + K G  S++ + ++L+D+YAK G ++ A
Sbjct: 217 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 276

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             +      K    +NAILSGF   +   E   M+ F + +  G+ P+ +T+  +LS  +
Sbjct: 277 YTVFSSVEEKNVVLWNAILSGFSRHVRSLE--AMIYFEKMQQMGICPNDITYISVLSACS 334

Query: 476 SQACLVRGR 484
               + +GR
Sbjct: 335 HLGLVEKGR 343



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 95/181 (52%), Gaps = 14/181 (7%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
              LL  SA     + G + HA  I+ G  AD I  N L+ MY+KCG ++ A ++F  + 
Sbjct: 23  LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 82

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
            R +VSWN M+ ++  +G  + AL+LF +M++EG +  + ++  V+ AC          C
Sbjct: 83  VRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCAC------AAKCC 136

Query: 587 LFNEIEQIYG--LRPILEHF----ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
           +F E +Q++G  L+  L+        ++D+  + G + +A NL+       S + W ++V
Sbjct: 137 VF-ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDA-NLVFECMPERSDVTWSSMV 194

Query: 641 S 641
           +
Sbjct: 195 A 195


>gi|293337115|ref|NP_001168043.1| uncharacterized protein LOC100381772 precursor [Zea mays]
 gi|223945665|gb|ACN26916.1| unknown [Zea mays]
 gi|224028321|gb|ACN33236.1| unknown [Zea mays]
          Length = 780

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 187/636 (29%), Positives = 333/636 (52%), Gaps = 9/636 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L +G+AVH  +L+  S+ D F   +++N+Y K  ++  A   F  M +R+ ++WT+ I 
Sbjct: 153 ELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIA 212

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G++   D  + + +  +M RS    N++T + IL ACS         Q+H   IKS    
Sbjct: 213 GFVQQEDPVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYL 272

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  V  +LIS Y ++G  +  E VF+ +     R +    +        + +  +   +L
Sbjct: 273 DHVVKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRHSVQRSIQLLRRML 332

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                PND  + +V S    +   E G+QLH L +K G +  + V +A+ TMY +    +
Sbjct: 333 FQCLRPNDKCYASVFSSVDSS---ELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLK 389

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           ++ ++F+ + E++ +SWT++I+G+   GH  +A       +  G   +   L+ ++  C+
Sbjct: 390 DSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACN 449

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
           +   L  G ++HG  ++  Y     +   LV +Y+K  DL++AR L D   CK     ++
Sbjct: 450 IPECLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSS 508

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           ++SG+        E+ + LF     AG   D    S ++S+ A+ A    G+ LH Y+ K
Sbjct: 509 MISGYATN--GYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASK 566

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G  +D+ V ++L+ +Y+K G++D + ++F  +   D+V+W A++  YA HG  + AL L
Sbjct: 567 VGILSDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALAL 626

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+ M R G  PD + ++ VL AC  +GL E G   FN +  +YG+ P+L H+ CMVDLLG
Sbjct: 627 FDLMIRCGVKPDTVILVSVLSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLG 686

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           R+GRL EA + I S P   + ++W TL++  ++  +         ++ + E  D+G F  
Sbjct: 687 RSGRLVEAKSFIESMPVKPNSMVWSTLLAACRVHDDVVLGRFVENKIHE-ENCDSGCFAT 745

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           +SN+ A  G  +   ++R ++ D+   KE G S++E
Sbjct: 746 MSNIRANSGDWEGVMEIRKSVKDVE--KEPGWSFLE 779



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 235/495 (47%), Gaps = 14/495 (2%)

Query: 86  KSGSQNDTFEANNLINLYAKFNRLDVAQKLF-DGMLVRSAITWTSLIKGYLDDGDYESVL 144
           K G   D +  + +++L AK  RL  A + F DG    S + W + I G + +G++   +
Sbjct: 63  KDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGV 122

Query: 145 GIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
            +  DM R S  + N  T S +L AC+  E+   G  +H   ++   E +VFVGTS+++M
Sbjct: 123 EMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNM 182

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y   G    A N F  +  ++V      I  + +  +   A  +   +L S    N YT 
Sbjct: 183 YVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTA 242

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF---DA 320
           T+++  C +   + E  Q+HG+ +K  +  +  V  A+++ Y   G  +  E++F   D 
Sbjct: 243 TSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDT 302

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           +S R++  W+A ISG  R     ++I      L   +  +  C A+V    S   + ELG
Sbjct: 303 VSNRSI--WSAFISGVSRHS-VQRSIQLLRRMLFQCLRPNDKCYASVF---SSVDSSELG 356

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            QLH   IK G++  V + +AL  +Y++  DLK +  + +    +    + ++++GF   
Sbjct: 357 RQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATH 416

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                 +   +       G  P+ V+ S +LS      CL++G+ +H + ++  Y     
Sbjct: 417 --GHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTS 473

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           + + L++MY+KC  +  A ++F     +D +  ++M+S YA +G  + AL LF+ M   G
Sbjct: 474 INHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAG 533

Query: 561 FAPDDISILGVLQAC 575
           F  D      ++  C
Sbjct: 534 FHIDRFLCSSIISIC 548



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 218/464 (46%), Gaps = 15/464 (3%)

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEY 235
           F EQ++  A K G   + ++ ++++ +    G   +A   F    Y+  V C N  I   
Sbjct: 53  FAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGA 112

Query: 236 NKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCY--ENLGVEEGKQLHGLAVKFGVV 292
            + GE  +   +F+ ++  S  EPN +T++ V+S C   E LGV  G+ +HG+ ++    
Sbjct: 113 VRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGV--GRAVHGMVLRRDSE 170

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
            ++ VG +IV MY K G    A   F  +  RN++SWT  I+G+V+      A+    E 
Sbjct: 171 YDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEM 230

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL 412
           L  G+  +     +++  CS  S +    Q+HG  IK     D  +  AL+  YA  G +
Sbjct: 231 LRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAV 290

Query: 413 KSARMLLDGFSCKYTAEFNAILSGFMEKIADDE-EDVMVLFSQQRLAGMEPDPVTFSRLL 471
           +    +        T    +I S F+  ++    +  + L  +     + P+   ++ + 
Sbjct: 291 QLCEKVFQEVD---TVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVF 347

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           S   S      GR LH   IK G+   V+V +AL TMY++C  +  ++++F+ + ++D V
Sbjct: 348 SSVDSSEL---GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEV 404

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           SW +M++ +A HG    A  +   M  EGF P+D+S+  +L AC        G  +   +
Sbjct: 405 SWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHV 464

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            + YG    + H  C+V +  +   L  A  L +++P  +  +L
Sbjct: 465 LRAYGRTTSINH--CLVSMYSKCKDLQTARKLFDATPCKDQIML 506


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 170/572 (29%), Positives = 300/572 (52%), Gaps = 7/572 (1%)

Query: 170 SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVN 229
           +L + ++F  ++   A      +N F+   ++ MY     F  AE  F  +  +D+   +
Sbjct: 107 ALSDGKLFHNRLQRMA-----NSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWS 161

Query: 230 FMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
            +I  Y + G  + A  +F+ +L     PN   F+ +I    +   ++ GKQ+H   ++ 
Sbjct: 162 TIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRI 221

Query: 290 GVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           G    IS+   I  MY K G  + AE   + ++ +N ++ T L+ GY ++     A+  F
Sbjct: 222 GFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLF 281

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
            + +  G+  D    + ++  C+   +L  G Q+H + IK G  S+V +GT LVD Y K 
Sbjct: 282 GKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKC 341

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
              ++AR   +         ++A+++G+ +    D    + +F   R  G+  +   ++ 
Sbjct: 342 ARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDR--ALEVFKAIRSKGVLLNSFIYTN 399

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +    ++ + L+ G  +HA +IK G  A +   +A+I+MY+KCG +D A Q F  I   D
Sbjct: 400 IFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPD 459

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFN 589
            V+W A++ A+A HG    AL LF+EM+  G  P+ ++ +G+L AC +SGL + G  + +
Sbjct: 460 TVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILD 519

Query: 590 EIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            +   YG+ P ++H+ CM+D+  RAG L EA+ +I S PF    + W++L+       N 
Sbjct: 520 SMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNL 579

Query: 650 KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +  ++A+  +  L+P D+ +++++ N+YA  G  DEAA+ R  M +  L KE  CSWI +
Sbjct: 580 EIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIV 639

Query: 710 DSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             K+H FV   + HP++E+IYSKL  LN   K
Sbjct: 640 KGKVHRFVVGDRHHPQTEQIYSKLKELNFSFK 671



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 220/474 (46%), Gaps = 5/474 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L  G+  H  L +  + N  F  N ++ +Y        A++ FD ++ +   +W+++I
Sbjct: 106 GALSDGKLFHNRLQRMANSN-KFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTII 164

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y ++G  +  + +   M       N    S ++ + +       G+QIH+  I+ GF 
Sbjct: 165 SAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFA 224

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            N+ + T + +MY   G    AE     +  K+      +++ Y KA  +  A  +F  +
Sbjct: 225 ANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKM 284

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           +S   E + + F+ ++  C     +  GKQ+H   +K G+  E+SVG  +V  Y K    
Sbjct: 285 ISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARF 344

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E A + F++I E N  SW+ALI+GY +SG   +A+  F      G+  +S     +   C
Sbjct: 345 EAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQAC 404

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           S  S+L  G Q+H  AIK G ++ +   +A++ +Y+K G +  A           T  + 
Sbjct: 405 SAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWT 464

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYS 490
           AI+            + + LF + + +G+ P+ VTF  LL+  +    +  G+  L + S
Sbjct: 465 AIICA--HAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMS 522

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
            + G    +   N +I +Y++ G +  A ++ + +  + D++SW ++L     H
Sbjct: 523 DEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSH 576



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 190/417 (45%), Gaps = 18/417 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L LG+ +H+ L++ G   +      + N+Y K   LD A+   + M  ++A+  T L+ G
Sbjct: 208 LDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVG 267

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y         L +   M     + +    S+IL+AC+ L D   G+QIH++ IK G E+ 
Sbjct: 268 YTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE 327

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V VGT L+  Y     F  A   F  +   +    + +I  Y ++G+ + A  VF  + S
Sbjct: 328 VSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRS 387

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
                N + +TN+   C     +  G Q+H  A+K G+V  +S  +A+++MY K G  + 
Sbjct: 388 KGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDY 447

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A + F  I + + ++WTA+I  +   G   +A+  F E    G+  ++     +++ CS 
Sbjct: 448 AHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSH 507

Query: 374 CSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGG----------------DLKSAR 416
              ++ G + L   + ++G    +     ++D+Y++ G                D+ S +
Sbjct: 508 SGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWK 567

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIAD-DEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            LL G       E   I +  + ++   D    +++F+   LAG   +   F ++++
Sbjct: 568 SLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMA 624



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 136/274 (49%), Gaps = 2/274 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K     GDL  G+ +H++ +K G +++      L++ Y K  R + A++ F+ +   +
Sbjct: 299 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 358

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W++LI GY   G ++  L +   +       N    + I +ACS + D I G QIHA
Sbjct: 359 DFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHA 418

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK G    +   +++ISMY   G    A   F  +   D      +I  +   G++  
Sbjct: 419 DAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFE 478

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIV 302
           A  +F  +  S   PN  TF  +++ C  +  V+EGK+ L  ++ ++GV   I   N ++
Sbjct: 479 ALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMI 538

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
            +Y + G+ +EA  +  ++  E +++SW +L+ G
Sbjct: 539 DVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 171/582 (29%), Positives = 294/582 (50%), Gaps = 34/582 (5%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + N+F   +L+S   HS    + E +F  +  +D    N +I  ++  G    +  ++  
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 251 LLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           LL  +   P   T + +I V         G  +H   ++ G      VG+ +V MY K G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195

Query: 310 MSEEAERMFDAIS-------------------------------ERNLISWTALISGYVR 338
           +  +A R+F  +                                +R+ I+WT +++G  +
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G   +A++ F      G+  D     +++  C   + LE G Q+H +  +  Y  +V +
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFV 315

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           G+ALVD+Y+K   ++ A  +    +C+    + A++ G+ +      E+ +  FS+ ++ 
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC--SEEAVRAFSEMQMD 373

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G++PD  T   ++S  A+ A L  G   H  ++ +G    + V NAL+T+Y KCGSI+ A
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F  +S  D VSW A+++ YA  G  K  + LFE+M   G  PD ++ +GVL AC  +
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRA 493

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           GL E G   F+ +++ +G+ PI +H+ CM+DL  R+GR  EA   I   P S     W T
Sbjct: 494 GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+S  +L  N +    A++ LL+ +P++  S++L+ +M+A +G   E A +R  M D ++
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
            KE GCSWI+  +K+H F A  + HP S  IY KL+ LN +M
Sbjct: 614 KKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 190/384 (49%), Gaps = 32/384 (8%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK------------------ 105
           ++ ++    D  LG +VH  +L+ G     F  + L+++YAK                  
Sbjct: 152 MIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKT 211

Query: 106 ---FNRL----------DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
              +N L          + A+ LF  M+ R +ITWT+++ G   +G     L +   M  
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
                +++T   IL AC  L     G+QIHA+  ++ +E+NVFVG++L+ MY      R 
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           AE VFR +  +++     MI+ Y +   SE A   F  +     +P+D+T  +VIS C  
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
              +EEG Q H LA+  G++R I+V NA+VT+YGK G  E+A R+FD +S  + +SWTAL
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HG 391
           ++GY + G   + I+ F + L  G+  D      V+  CS    +E G        K HG
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG 511

Query: 392 YLSDVRLGTALVDIYAKGGDLKSA 415
            +      T ++D+Y++ G  K A
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEA 535



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 242/550 (44%), Gaps = 73/550 (13%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQKLFDGM--------- 119
           G   +++  AVH  +LK+  Q   TF  N+L+  YAK  RL  A+++FD M         
Sbjct: 24  GRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRN 83

Query: 120 ----------LV------------RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE-K 156
                     LV            R A+++ +LI G+   G     + +   + R E  +
Sbjct: 84  ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
               T S ++   S L DR  G  +H   ++ GF    FVG+ L+ MY   G  R+A  V
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203

Query: 217 FRGLAYKDV-----------RC--------------------VNFMILEYNKAGESEMAF 245
           F+ +  K V           RC                       M+    + G    A 
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            VF  + +     + YTF ++++ C     +EEGKQ+H    +      + VG+A+V MY
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K      AE +F  ++ RN+ISWTA+I GY ++    +A+  F E    GI  D   L 
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +VI  C+  ++LE G Q H  A+  G +  + +  ALV +Y K G ++ A  L D  S  
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               + A+++G+ +      ++ + LF +    G++PD VTF  +LS + S+A LV    
Sbjct: 444 DQVSWTALVTGYAQ--FGKAKETIDLFEKMLANGLKPDGVTFIGVLS-ACSRAGLVEKGC 500

Query: 486 LHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYAL 542
            +  S++  +    I  +   +I +Y++ G    A +  K +    D   W  +LS+  L
Sbjct: 501 DYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560

Query: 543 HG---LGKGA 549
            G   +GK A
Sbjct: 561 RGNMEIGKWA 570


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 214/682 (31%), Positives = 326/682 (47%), Gaps = 27/682 (3%)

Query: 63  QLVKISIGSGDLKLGQA-VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           QL+ +S+ SG   L  A   + LL+  S        +L+ LY  F R D   +     L+
Sbjct: 42  QLLAVSLASGHYTLDHAPASSLLLRYASLRS--PPAHLLRLYRAFPRPD---RFLRNSLL 96

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           RS  T  + +       D  S    A  +  S  +      S    A            +
Sbjct: 97  RSLPTLRADL--LFPSPDSFSFAFAATSLASSCSRGGISPPSAASAAL---------RPL 145

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA A+ SGF  + FV ++L  +YF      +A  VF  +   D    N ++     AG S
Sbjct: 146 HALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLL-----AGLS 200

Query: 242 -EMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
              A   FV +  +    P+  T  +V+    E      G+ +H    K G+ +   V  
Sbjct: 201 GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVT 260

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            ++++Y K G  E A  +FD +   +L+++ ALISGY  +G  G ++  F E + +G+  
Sbjct: 261 GLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRP 320

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
            SS L  +I   S   +  L   LH   +K G  ++  + TAL  +Y +  D+ SAR   
Sbjct: 321 SSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAF 380

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    K    +NA++SG+ +      E  + LF Q +   + P+P+T S  LS  A    
Sbjct: 381 DAMPEKTMESWNAMISGYAQN--GLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGA 438

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  G+ +H          +V V  ALI MY KCGSI  A  IF  + ++++VSWN M+S 
Sbjct: 439 LSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISG 498

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y LHG G  AL L+++M      P   + L VL AC + GL + G  +F  +   YG+ P
Sbjct: 499 YGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITP 558

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSE-SPLLWRTLVSVSKLMANSKFSILASKR 658
            +EH  CMVDLLGRAG+L EA  LI+  P S   P +W  L+    +  +   + LAS++
Sbjct: 559 GIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQK 618

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L +LEP++ G ++L+SN+Y  +    EAA VR      +L K  GC+ IEI  + H F+A
Sbjct: 619 LFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMA 678

Query: 719 SGKDHPESEEIYSKLDLLNDEM 740
             + HP+S+ IY  L+ L  +M
Sbjct: 679 GDRAHPQSDAIYLYLEKLTAKM 700


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 176/568 (30%), Positives = 298/568 (52%), Gaps = 5/568 (0%)

Query: 177 FGEQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
            G  +HA  +K+       F+   LI+MY        A  V R    ++V     ++   
Sbjct: 24  LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGL 83

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G    A   F  +      PND+TF  V            GKQ+H LAVK G + ++
Sbjct: 84  AQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDV 143

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VG +   MY K  + ++A ++FD I ERNL +W A IS  V  G   +AI  F+EF  +
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRI 203

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   +S      ++ CS    L+LG+Q+HG   + G+ +DV +   L+D Y K   ++S+
Sbjct: 204 GGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSS 263

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
            ++      K    + ++++ +++   D++  V+ L S++ +  +E      S +LS  A
Sbjct: 264 EIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEI--VETSDFMISSVLSACA 321

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
             A L  GRS+HA+++K     ++ VG+AL+ MY KCG I+ + Q F  + ++++V+ N+
Sbjct: 322 GMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNS 381

Query: 536 MLSAYALHGLGKGALLLFEEMKREGF--APDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           ++  YA  G    AL LFE+M   G   AP+ ++ + +L AC  +G  E G+ +F+ ++ 
Sbjct: 382 LIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKS 441

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            YG+ P  EH++C+VD+LGRAG + +A   I   P   +  +W  L +  ++       I
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGI 501

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
           LA++ L  L+PKD+G+ +L+SN +A  G   EA  VR  M  + + K AG SWI + +++
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQV 561

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK 741
           H F A  + H  ++EI + L  L ++M+
Sbjct: 562 HAFQAKDRSHKMNKEIQTMLTKLRNKME 589



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 236/485 (48%), Gaps = 5/485 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           L+K +I +  ++LG+ VHA ++K+  S    F AN LIN+Y+K +  + A+ +      R
Sbjct: 12  LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + ++WTSL+ G   +G + + L    +M R     N+ T   + +A + L   + G+QIH
Sbjct: 72  NVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIH 131

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A A+K G   +VFVG S   MY  +    +A  +F  +  +++   N  I      G  +
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPK 191

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A   F+       +PN  TF   ++ C + L ++ G Q+HGL  + G   ++SV N ++
Sbjct: 192 EAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLI 251

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
             YGK      +E +F  +  +N +SW +L++ YV++    KA   +L      +     
Sbjct: 252 DFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDF 311

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +++V+  C+  + LELG  +H  A+K     ++ +G+ALVD+Y K G ++ +    D  
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEM 371

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K     N+++ G+  +   D    +      R  G  P+ +TF  LLS  +    +  
Sbjct: 372 PEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVEN 431

Query: 483 GRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSA 539
           G  +   S+K+ Y  +    +   ++ M  + G ++ AF+  K +  +  +S W A+ +A
Sbjct: 432 GMKIFD-SMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNA 490

Query: 540 YALHG 544
             +HG
Sbjct: 491 CRMHG 495


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 206/643 (32%), Positives = 318/643 (49%), Gaps = 81/643 (12%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVF--RGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           + ++   T+LI+ +  +G    A  +F    L  +D  C N MI  Y+   +   A  +F
Sbjct: 78  QPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELF 137

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ---LHGLAVKFGVVREISVGNAIVTMY 305
             LL + F P+++TFT+V+      L VE+ KQ   +H   VK G     SV NA+++++
Sbjct: 138 RDLLRNGFRPDNFTFTSVLGAL--ALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVF 195

Query: 306 GKHGMSEE---------AERMFDAISERNLISWTALISGYVRSG---------------- 340
            K   S           A ++FD ++ER+ +SWT +I+GYVR+G                
Sbjct: 196 VKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKL 255

Query: 341 ------------HGG---KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
                       H G   +A+  F +   LGI  D     +V+  C+       G Q+H 
Sbjct: 256 VVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHA 315

Query: 386 FAIKHGYLSDV----RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           + ++      +     +  AL  +Y K G +  AR + +    K    +NAILSG++   
Sbjct: 316 YILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAG 375

Query: 442 ADDE-----------------------------EDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             DE                             E+ + LF++ +  G EP    F+  + 
Sbjct: 376 RIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAII 435

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
             A  A L+ GR LHA  ++ G+ + +  GNALITMYAKCG ++ A  +F  +   D VS
Sbjct: 436 ACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVS 495

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           WNAM++A   HG G  AL LFE M +E   PD I+ L VL  C ++GL E G   F  + 
Sbjct: 496 WNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMS 555

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
            +YG+ P  +H+A M+DLL RAG+ SEA ++I + P    P +W  L++  ++  N    
Sbjct: 556 GLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLG 615

Query: 653 ILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
           I A++RL +L P+  G+++L+SNMYA  G  D+ AKVR  M D  + KE GCSWIE+++K
Sbjct: 616 IQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENK 675

Query: 713 LHHFVASGKDHPESEEIYSKLDLLNDEM-KLKVKDSSAFELQD 754
           +H F+     HPE + +Y+ L+ L  +M KL     + F L D
Sbjct: 676 VHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHD 718



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 35/332 (10%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           L    ++ D      +I  Y +   LD A++  DGM  +  + W ++I GY+  G +   
Sbjct: 216 LFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEA 275

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS----GFENNVFVGTS 199
           L +   MY    +++E T + +L AC+     + G+Q+HA+ +++      + ++ V  +
Sbjct: 276 LEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNA 335

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE------------------- 240
           L ++Y+  G   EA  VF  +  KD+   N ++  Y  AG                    
Sbjct: 336 LATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTW 395

Query: 241 ------------SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
                        E +  +F  + S  FEP DY F   I  C     +  G+QLH   V+
Sbjct: 396 TVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVR 455

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G    +S GNA++TMY K G+ E A  +F  +   + +SW A+I+   + GHG +A+  
Sbjct: 456 LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALEL 515

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           F   L   I  D     TV+  CS    +E G
Sbjct: 516 FELMLKEDILPDRITFLTVLSTCSHAGLVEEG 547



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/536 (22%), Positives = 228/536 (42%), Gaps = 93/536 (17%)

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE--ISVGNA 300
           +A  V  H+++S F+P  Y    +I V  ++  +     L      F  +R+  I     
Sbjct: 33  IARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHL------FDEIRQPDIVARTT 86

Query: 301 IVTMYGKHGMSEEAERMFDA--ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           ++  +   G S  A  +F A  +  R+ + + A+I+GY  +  G  AI  F + L  G  
Sbjct: 87  LIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFR 146

Query: 359 CDSSCLATVIDGCS-VCSNLELGLQLHGFAIK--HGYLSDVRLG---------------- 399
            D+    +V+   + +  + +   Q+H   +K   G+++ V                   
Sbjct: 147 PDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSS 206

Query: 400 ----------------------TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
                                 T ++  Y + G+L +AR  LDG + K    +NA++SG+
Sbjct: 207 SSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGY 266

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT---- 493
           +      E   + +F +  L G++ D  T++ +LS  A+    + G+ +HAY ++T    
Sbjct: 267 VHHGFFLE--ALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRP 324

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY------------- 540
                + V NAL T+Y KCG +D A Q+F  +  +D+VSWNA+LS Y             
Sbjct: 325 SLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFF 384

Query: 541 ------------------ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
                             A +G G+ +L LF  MK EGF P D +  G + AC +     
Sbjct: 385 EEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALM 444

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            G  L  ++ ++ G    L     ++ +  + G +  A  L  + P+ +S + W  +++ 
Sbjct: 445 HGRQLHAQLVRL-GFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDS-VSWNAMIAA 502

Query: 643 SKLMANSKFSILASKRLL--DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
                +   ++   + +L  D+ P D  +F+ V +  +  G+++E  +   +M+ L
Sbjct: 503 LGQHGHGAQALELFELMLKEDILP-DRITFLTVLSTCSHAGLVEEGHRYFKSMSGL 557



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 135/603 (22%), Positives = 238/603 (39%), Gaps = 125/603 (20%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML--------------- 120
           + + VHA ++ SG +   +  N LI++Y K + L  A  LFD +                
Sbjct: 33  IARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHS 92

Query: 121 ------------------VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC 162
                             +R  + + ++I GY  + D    + +  D+ R+  + +  T 
Sbjct: 93  SAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTF 152

Query: 163 SVILEACSLL-EDRIFGEQIHAFAIKSG-------------------------------- 189
           + +L A +L+ ED    +QIH   +KSG                                
Sbjct: 153 TSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAA 212

Query: 190 --------FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
                    E +    T++I+ Y  +G    A     G+  K V   N MI  Y   G  
Sbjct: 213 ARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF----GVVREISV 297
             A  +F  +     + +++T+T+V+S C        GKQ+H   ++      +   +SV
Sbjct: 273 LEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSV 332

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA+ T+Y K G  +EA ++F+ +  ++L+SW A++SGYV +G   +A + F E  +  +
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL 392

Query: 358 C--------------------------------CDSSCLATVIDGCSVCSNLELGLQLHG 385
                                            CD +  A  I  C+  + L  G QLH 
Sbjct: 393 LTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYA-FAGAIIACAWLAALMHGRQLHA 451

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
             ++ G+ S +  G AL+ +YAK G +++A  L        +  +NA+++   +      
Sbjct: 452 QLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQH--GHG 509

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN-- 503
              + LF       + PD +TF  +LS + S A LV     +  S+   Y   +  G   
Sbjct: 510 AQALELFELMLKEDILPDRITFLTVLS-TCSHAGLVEEGHRYFKSMSGLYG--ICPGEDH 566

Query: 504 --ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LG-KGALLLFEEM 556
              +I +  + G    A  + + +  +     W A+L+   +HG   LG + A  LFE M
Sbjct: 567 YARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELM 626

Query: 557 KRE 559
            + 
Sbjct: 627 PQH 629


>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 182/566 (32%), Positives = 300/566 (53%), Gaps = 13/566 (2%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q+HA  +KS    ++FV   LIS +        A N F  + Y +V   N MI  ++  
Sbjct: 37  KQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAHSHN 96

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            +   AF  F  +       +++TF  ++ VC  N+ +   + +H    KFG + ++ V 
Sbjct: 97  SQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVP 156

Query: 299 NAIVTMYGKHGMS--EEAERMFDAI-SERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           N+++  Y K G      A+++F ++ + R+++SW ++ISG  + G   +A   F E  + 
Sbjct: 157 NSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEK 216

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
               D     T++DG      ++   +L     +   +S     + +V  Y K GD++ A
Sbjct: 217 ----DGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVS----WSTMVLGYCKAGDMEMA 268

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           RML D    K    +  I+SGF EK    E   + LF Q   A ++ D  T   +L+  A
Sbjct: 269 RMLFDKMPVKNLVSWTIIVSGFAEKGLARE--AISLFDQMEKACLKLDNGTVMSILAACA 326

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
               L  G  +HA      +     + NAL+ MYAKCG ++ A+ +F  I ++D+VSWNA
Sbjct: 327 ESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNA 386

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ML   A+HG G  AL LF+ MK EGF+P+ ++++GVL AC ++GL + GI  F+ +E+ Y
Sbjct: 387 MLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDY 446

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            L P +EH+ CMVDLLGR GRL EA+ LI + P + + ++W TL+   ++    + +   
Sbjct: 447 TLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREV 506

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
              L++LEP D+G+F ++SN+YA  G  +  A  R  M  +   K +G S IE+++++H 
Sbjct: 507 LDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHE 566

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMK 741
           F    + HP+S+ IY  ++ L  E+K
Sbjct: 567 FTVFDRSHPKSDNIYQVINGLRHELK 592



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 209/510 (40%), Gaps = 45/510 (8%)

Query: 52  SERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDV 111
           S R LL      L K +    +L   + +HA +LKS    D F    LI+ ++   ++ +
Sbjct: 15  STRKLLEQKLSDLHKCT----NLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLL 70

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           A   F+ +   +   + ++I+ +  +            M R     +  T   +L+ C+ 
Sbjct: 71  ATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTG 130

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC--FREAENVFRGL-AYKDVRCV 228
                  E +HA   K GF ++VFV  SLI  Y   G      A+ +F  + A +DV   
Sbjct: 131 NVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSW 190

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N MI    K G  E A  VF  +   D                   G+     L G  VK
Sbjct: 191 NSMISGLAKGGLYEEARKVFDEMPEKD-------------------GISWNTMLDGY-VK 230

Query: 289 FGVV------------REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
            G +            R +   + +V  Y K G  E A  +FD +  +NL+SWT ++SG+
Sbjct: 231 VGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGF 290

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
              G   +AI+ F +     +  D+  + +++  C+    L LG ++H     + +    
Sbjct: 291 AEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTT 350

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  ALVD+YAK G L  A  + +    K    +NA+L G    +       + LF + +
Sbjct: 351 EISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGL--AMHGHGVKALELFKRMK 408

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA--ADVIVGNALITMYAKCGS 514
             G  P+ VT   +L  + + A L+     +  +++  Y    +V     ++ +  + G 
Sbjct: 409 EEGFSPNKVTMIGVLC-ACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGR 467

Query: 515 IDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           ++ A ++ + +    + + W  +L A  +H
Sbjct: 468 LEEAIRLIRNMPMAPNAIIWGTLLGACRMH 497


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 184/637 (28%), Positives = 330/637 (51%), Gaps = 10/637 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAK-FNRLDV--AQKLFDGMLVRSAITWTSLIKGYLD 136
           +H  L+++   +D   A  L+ L A   +R D+  A+K+FD M   +AI W  +I+GY  
Sbjct: 37  LHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYNS 96

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL---EDRIFGEQIHAFAIKSGFENN 193
                  L +   M RS    + +T + + ++ +     + R  G+ +HA   + GF ++
Sbjct: 97  CHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASD 156

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FV + LI+ Y  S    +A  VF  +  +DV     MI  + + G+ +        + S
Sbjct: 157 LFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQS 216

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              +PN  T  +++S C +   V++G  ++    ++G+  ++ + NA++ MY K G   +
Sbjct: 217 EGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSD 276

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A + F  +  RN  SW  LI G+V++G   +A+  F E L  G+  D   L +V+   + 
Sbjct: 277 AWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQ 336

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +L+ G  LH +   H    D+ L  +L+++YAK GD+ +A ++ +  + +    + A+
Sbjct: 337 LGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAM 396

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + G+++ +         LF   ++  +    +    LLS  +    L +GR +H+Y  + 
Sbjct: 397 VCGYVKGL--QFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEK 454

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
               D+ + +AL+ MYAKCG ID A +IF  +  +  ++WNAM+   A  G GK A+ LF
Sbjct: 455 SVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALF 514

Query: 554 EE-MKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           E+ +K     PD I++  VL AC + G+ + G+  FN +  + G+ P  EH+ C+VDLLG
Sbjct: 515 EQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTL-GIVPDNEHYGCIVDLLG 573

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           RAG L EA N I   P   +P++W +L++  ++    +   +  + ++DL P D G+ +L
Sbjct: 574 RAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAHVL 633

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           +SN++A +G  D+  +VR  M   R+ K  G S I++
Sbjct: 634 ISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 254/524 (48%), Gaps = 14/524 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G AVHA + + G  +D F  + LIN Y     ++ A+K+F+ M  R  ++WT +I  +  
Sbjct: 141 GDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQ 200

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G +++VL    +M     K N+ T   +L AC  +     G  ++A   + G E +V +
Sbjct: 201 CGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDI 260

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +LI MY   GC  +A   F+G+  ++ +  N +I  + + G+ + A  +F  +LS   
Sbjct: 261 RNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGV 320

Query: 257 EPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            P+  T  +V+S  Y  LG +++G+ LH       +  +I + N+++ MY K G    AE
Sbjct: 321 IPDVITLVSVLST-YAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAE 379

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +F+ ++ R+++SWTA++ GYV+      A N F +     +      L +++  CS   
Sbjct: 380 IIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLG 439

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
            L+ G ++H +  +    +D+ L +ALVD+YAK G + +A  +      K T  +NA++ 
Sbjct: 440 ALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIG 499

Query: 436 GFMEKIADDEEDVMVLFSQ-QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           G   +     ++ + LF Q  +L   +PD +T   +L        +  G       +  G
Sbjct: 500 GLASQ--GQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLG 557

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGLGKGALLLF 553
              D      ++ +  + G +D A+   + +    + V W ++L+A  +H   +   ++ 
Sbjct: 558 IVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIG 617

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + +     AP+D+    VL + +++   EG    ++++EQ+ G+
Sbjct: 618 QHII--DLAPNDVGA-HVLISNLHA--EEGQ---WDDVEQVRGM 653



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 2/266 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+ G+ +H ++       D    N+LIN+YAK   +  A+ +F+ M  R  ++WT+++
Sbjct: 338 GDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMV 397

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY+    + +   +  DM   +   +E     +L ACS L     G +IH++  +    
Sbjct: 398 CGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVR 457

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            ++++ ++L+ MY   GC   A  +F  + +K     N MI      G+ + A  +F  L
Sbjct: 458 TDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQL 517

Query: 252 LS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L   D +P+  T   V+  C     V+EG     L +  G+V +      IV + G+ G+
Sbjct: 518 LKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGL 577

Query: 311 SEEAERMFDAIS-ERNLISWTALISG 335
            +EA      +  + N + W +L++ 
Sbjct: 578 LDEAYNFIQKMPIQPNPVIWGSLLAA 603


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 221/729 (30%), Positives = 363/729 (49%), Gaps = 47/729 (6%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEA--NNLINLYAKFNRLDVAQKLFDGM 119
           P  +K +    D +  +A+H   L+    +    A  N L+  YA+   LD A  LF   
Sbjct: 52  PPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFAAT 111

Query: 120 L--VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR-- 175
              +R A+++ SLI        +   L    DM  ++ + +  T   +L ACS L D+  
Sbjct: 112 PPDLRDAVSYNSLISALCLFRRWGHALDALRDML-ADHEVSSFTLVSVLLACSHLADQGH 170

Query: 176 IFGEQIHAFAIKSGFENN---VFVGTSLISMYFHSGCFREAENVF--RGLAYKDVRCVNF 230
             G + HAFA+K GF +     F   +L+SMY   G   +A+ +F   G    D+   N 
Sbjct: 171 RLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNT 230

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVK 288
           MI    + G  E A  V   +++    P+  TF + +  C   E LGV  G+++H   +K
Sbjct: 231 MISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGV--GREVHAFVLK 288

Query: 289 FGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAISE--RNLISWTALISGYVRSGHGG-- 343
              +   S V +A+V MY  +     A R+FD + E  R L  W A+I GY +  HGG  
Sbjct: 289 DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQ--HGGMD 346

Query: 344 -KAINGFLEFLDLGICCDS-SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
            +AI  F        C  S + +A V+  C+          +HG+ +K    S+  +  A
Sbjct: 347 EEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNA 406

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE--------------- 446
           L+D+YA+ G +  A  +      +    +N +++G + +    E                
Sbjct: 407 LMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAAS 466

Query: 447 -DVMVLFSQQRLAGME--PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN 503
            + M+      + G    P+ +T   LL   A  A   RG+ +H Y+++    +D+ VG+
Sbjct: 467 GETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGS 526

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA- 562
           AL+ MYAKCG +  A  +F  +  R++++WN ++ AY +HGLG  AL LF+ M   G A 
Sbjct: 527 ALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEAT 586

Query: 563 PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMN 622
           P++++ +  L AC +SGL + G+ LF  +++ YG  P     AC+VD+LGRAGRL EA  
Sbjct: 587 PNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYG 646

Query: 623 LINS-SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
           +I+S +P       W T++   +L  N K   +A++RL +LEP +A  ++L+ N+Y+  G
Sbjct: 647 IISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAG 706

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           + + + +VR  M    ++KE GCSWIE+D  +H F+A    HPES ++++ +D L + M+
Sbjct: 707 LWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMR 766

Query: 742 LK--VKDSS 748
            +  V D+S
Sbjct: 767 REGYVPDTS 775


>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
 gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
          Length = 623

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 179/625 (28%), Positives = 334/625 (53%), Gaps = 11/625 (1%)

Query: 57  LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           + + +  L+K    S  L  G+ VH+ ++ +G   DT+  N L+ +Y +   LD A+  F
Sbjct: 1   MIDTYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAF 60

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
            G+  R+  +WT LI   + +G+    L +   M     + N+ T   +L ACS+  D  
Sbjct: 61  RGIHQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLS 120

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G++IH      G E ++  G +L++MY       EA  VF  + ++DV     +I  Y 
Sbjct: 121 LGKKIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYA 180

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
            AG    A  ++  +      P+  T  +V+  C     + EGK +H   V  GV  ++ 
Sbjct: 181 HAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVF 240

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           VG A+V+ YGK    ++A ++FD I +++++ W A+I  Y ++    KA   +LE ++  
Sbjct: 241 VGTAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQ 300

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA- 415
           +  +   L T++D CS    +E G  LH  A   GYLS   +  AL+++YAK G L++A 
Sbjct: 301 MRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENAT 360

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV----MVLFSQQRLAGMEPDPVTFSRLL 471
           R+ ++      T     +++     +A+ +ED+    + ++ +    G++   VT+  +L
Sbjct: 361 RVFIEA-----TNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVL 415

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           ++ A+      GR +H+ S+ TG  +DV V N+LI +Y  CG+++ A   F+ ++ +++V
Sbjct: 416 AVCANFGDFTTGREVHSRSLATGCCSDV-VQNSLICLYGGCGNLEAAQTAFESVASKNVV 474

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           SW+++++AYA +G    A  LF  M ++G  P+ ++   VL AC ++GL++ G   F  +
Sbjct: 475 SWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSM 534

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
           +  + L P  EH+ CMV+LL ++GR+ +A + +++ P       WR+L+   ++  + ++
Sbjct: 535 QGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEY 594

Query: 652 SILASKRLLDLEPKDAGSFILVSNM 676
             LA+K+LLD EP+++ +++L+ N+
Sbjct: 595 GALAAKQLLDAEPRNSAAYVLLYNI 619


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 178/519 (34%), Positives = 280/519 (53%), Gaps = 9/519 (1%)

Query: 227 CVNFMILEYNKAG---ESEMAFHVFV-HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           C N  ++++++ G   +S      FV H+  S+F  N + + N +  C +      GK L
Sbjct: 3   CRNNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEF--NSHAYANALQDCIQKDEPSRGKGL 60

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H   +K G   ++   N ++ MY K     +A ++FD + ERN IS+  LI GY  S   
Sbjct: 61  HCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRF 120

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +AI  F+  L   +  +    A+V+  C+    L LG Q+H   IK G  SDV +  AL
Sbjct: 121 LEAIELFVR-LHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNAL 179

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           +D+YAK G ++++  L      +    +N ++ G ++    D E  + LF       ++ 
Sbjct: 180 MDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQ--LGDGEKALRLFLNMLEYRVQA 237

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
             VT+S  L   AS A L  G  +H+ ++KT +  D++V NALI MYAKCGSI  A  +F
Sbjct: 238 TEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVF 297

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             ++ +D VSWNAM+S Y++HGLG+ AL +F++M+     PD ++ +GVL AC  +GL +
Sbjct: 298 DLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLD 357

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            G   F  + Q +G+ P +EH+ CMV LLGR G L +A+ LI+  PF  S ++WR L+  
Sbjct: 358 QGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 417

Query: 643 SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
             +  + +   ++++R+L++EP+D  + +L+SNMYA     D  A VR  M    + KE 
Sbjct: 418 CVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEP 477

Query: 703 GCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           G SWIE    +H F      HPE   I   L+ L+ + K
Sbjct: 478 GLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTK 516



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 201/398 (50%), Gaps = 7/398 (1%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ +H  +LK G   D F  N L+N+Y K + L  A KLFD M  R+ I++ +LI+GY +
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
              +   + +   ++R E   N+ T + +L+AC+ +E    G QIH   IK G  ++VFV
Sbjct: 117 SVRFLEAIELFVRLHR-EVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 175

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L+ +Y   G    +  +F    +++    N +I+ + + G+ E A  +F+++L    
Sbjct: 176 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 235

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +  + T+++ +  C     +E G Q+H L VK    ++I V NA++ MY K G  ++A  
Sbjct: 236 QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARL 295

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +FD +++++ +SW A+ISGY   G G +A+  F +  +  +  D      V+  C+    
Sbjct: 296 VFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGL 355

Query: 377 LELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAIL 434
           L+ G       I+ HG    +   T +V +  +GG L  A  L+D    + +   + A+L
Sbjct: 356 LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
              +  I +D E  +   S QR+  MEP       LLS
Sbjct: 416 GACV--IHNDIE--LGRISAQRVLEMEPQDKATHVLLS 449



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 135/266 (50%), Gaps = 2/266 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L LG  +H  ++K G  +D F +N L+++YAK  R++ + +LF     R+ +TW ++I G
Sbjct: 154 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVG 213

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           ++  GD E  L +  +M     +  E T S  L AC+ L     G QIH+  +K+ F+ +
Sbjct: 214 HVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKD 273

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           + V  +LI MY   G  ++A  VF  +  +D    N MI  Y+  G    A  +F  +  
Sbjct: 274 IVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQE 333

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-FGVVREISVGNAIVTMYGKHGMSE 312
           ++ +P+  TF  V+S C     +++G+      ++  G+   I     +V + G+ G  +
Sbjct: 334 TEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLD 393

Query: 313 EAERMFDAIS-ERNLISWTALISGYV 337
           +A ++ D I  + +++ W AL+   V
Sbjct: 394 KAVKLIDEIPFQPSVMVWRALLGACV 419


>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
 gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 204/679 (30%), Positives = 343/679 (50%), Gaps = 22/679 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++   G G+L +G+ +H  +LKSG   D     +L+ +Y +   L  A+K+FD M 
Sbjct: 105 YPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMC 164

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL----EACSLLEDRI 176
           VR  + W+S+I  Y+++G Y   L    +M+RS         SV+L    EAC  +    
Sbjct: 165 VRDLVLWSSIISCYVENGVYREGL----EMFRSMICEGIRPDSVMLLSVAEACGKIGCLR 220

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
             + +H + ++ G   +  +  SLI MY   G    A+ +F  +  +   C   MI  YN
Sbjct: 221 LAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYN 280

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREI 295
           +    E A  VF+ +  S+ EPND T  +V++ C     ++EGK +H   ++  + V  +
Sbjct: 281 QNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGL 340

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            +G A++  Y         E++  +I   N++SW  LIS Y R G   +A+  F   +  
Sbjct: 341 DLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAK 400

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           GI  DS  LA+ I   +   +++ G Q+HG  +K G+  D  +  +L+D+Y+K G   SA
Sbjct: 401 GIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFF-DEFVQNSLMDMYSKCGFASSA 459

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             + +    K    +N ++ GF +     E   + LF +     +E + VTF     LSA
Sbjct: 460 YTIFNKIKHKSIVAWNCMICGFSQNGISVE--ALSLFDEMFKNRLEINKVTF-----LSA 512

Query: 476 SQAC-----LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
            QAC     L +G+ +H   I TG   D+ +  AL+ MYAKCG +  A ++F  I ++ +
Sbjct: 513 IQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSV 572

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           VSW+ M++A+ +HG    A  LF +M      P++++ + +L AC ++G  + G   FN 
Sbjct: 573 VSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNT 632

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           +   YG+ P +EHFA +VDLL RAG ++ A  +I S     +  +W  L++  ++     
Sbjct: 633 MRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMD 692

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
                ++ L  +   D G + L+SN+YA  G   E+ KVR+ M  + L K  G S +EID
Sbjct: 693 MIEYIAEELGGISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEID 752

Query: 711 SKLHHFVASGKDHPESEEI 729
            K++ F +      + +EI
Sbjct: 753 RKIYRFGSGDTSEWQMKEI 771



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 197/414 (47%), Gaps = 29/414 (7%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +   CS L  R+   Q+HA  + +   NN    T L+  Y   G  + +  VF      D
Sbjct: 7   LFRTCSTLR-RL--TQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPD 63

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLS---------SDFEPN-DYTFTNVISVCYENL 274
               + +I       +  +  H+F  +LS         S    N  + + +VI       
Sbjct: 64  SFMFSVLI-------KCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAV---T 113

Query: 275 GVEE---GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
           GV E   G++LHG  +K G   +  +G ++V MYG+     +A+++FD +  R+L+ W++
Sbjct: 114 GVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSS 173

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           +IS YV +G   + +  F   +  GI  DS  L +V + C     L L   +HG+ ++ G
Sbjct: 174 IISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREG 233

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
            + D  L  +L+ +Y++ G L  A+ L +    + T+ + +++S + +   +  E+ + +
Sbjct: 234 MVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQN--ECFEEALDV 291

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI-VGNALITMYA 510
           F + + + +EP+ VT   +L+  A    L  G+S+H + ++       + +G ALI  Y+
Sbjct: 292 FIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYS 351

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
            C  +    ++   I + +IVSWN ++S YA  GL   A+  F  M  +G  PD
Sbjct: 352 ACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPD 405



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 5/206 (2%)

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
            CS L    QLH   +     ++    T L++ Y++ G L+S+R++        +  F+ 
Sbjct: 10  TCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSV 69

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAG---MEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           ++   +      E  V+ LF+     G    +     +  ++        L+ GR LH  
Sbjct: 70  LIKCHLWNHLFRE--VLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGR 127

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
            +K+G+  D ++G +L+ MY +   +  A ++F  +  RD+V W++++S Y  +G+ +  
Sbjct: 128 ILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREG 187

Query: 550 LLLFEEMKREGFAPDDISILGVLQAC 575
           L +F  M  EG  PD + +L V +AC
Sbjct: 188 LEMFRSMICEGIRPDSVMLLSVAEAC 213


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 199/663 (30%), Positives = 338/663 (50%), Gaps = 6/663 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
            HA ++ +G  ND      L +  +    +D A  LF  +       +  LI+ +  +  
Sbjct: 29  THAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNS 88

Query: 140 YESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
             S + +   + +S   + +  T + ++   S L        +HA +I +GF +++FVG+
Sbjct: 89  PSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLG---LLLHAHSIVAGFGSDLFVGS 145

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           ++++ YF       A  VF G+  +D    N M+    K    + A  +F  ++      
Sbjct: 146 AIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGF 205

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
           +  T   V+    E   +  G  +  LA+K G      V   +  +Y K G  E A  +F
Sbjct: 206 DSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLF 265

Query: 319 DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLE 378
             I + +L+S+ A+ISGY  +     ++  F E L  G   +SS +  +I       +L 
Sbjct: 266 GQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLH 325

Query: 379 LGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFM 438
           L   +HGF  K G +S+  + TAL  +Y++  +++SAR+L D  S K  A +NA++SG+ 
Sbjct: 326 LTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYA 385

Query: 439 EKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAAD 498
           +      E  + LF + +   + P+PVT + +LS  A    L  G+ +H    +  + ++
Sbjct: 386 QN--GLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESN 443

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           + V  ALI MYAKCGSI  A ++F  + +++ V+WNAM+S Y LHG G  AL LF EM  
Sbjct: 444 IFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLH 503

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLS 618
              +P  ++ L VL AC ++GL   G  +F  +   +G  P+ EH+ACMVDLLGRAG L 
Sbjct: 504 SRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLD 563

Query: 619 EAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
           +A++ I   P    P +W  L+    +  ++  + LAS +L +L+P++ G ++L+SN+Y+
Sbjct: 564 KALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYS 623

Query: 679 GQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLND 738
                 EAA VR  +   +L+K  GC+ IE+ + LH F +  + HP++  IY+ L+ L  
Sbjct: 624 AGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTG 683

Query: 739 EMK 741
           +M+
Sbjct: 684 KMR 686



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ +    G L L + +H F  KSG  +++  +  L  +Y++ N ++ A+ LFD    +S
Sbjct: 314 LIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKS 373

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W ++I GY  +G  E  + +  +M + E + N  T + IL AC+ L     G+ +H 
Sbjct: 374 LASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHD 433

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
              +  FE+N+FV T+LI MY   G   EA+ +F  +  K+    N MI  Y   G    
Sbjct: 434 LINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHE 493

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           A ++F  +L S   P   TF +V+  C     V EG ++
Sbjct: 494 ALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEI 532


>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 172/551 (31%), Positives = 298/551 (54%), Gaps = 5/551 (0%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
           H  + ++ +C+       G Q+H+  IK GF++NV++ ++L+ MY   G    A+ +F  
Sbjct: 80  HILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDE 139

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           + +++V   N +I  Y   G  E+A  +F+ ++    +P  ++ + V+  C+     + G
Sbjct: 140 MPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLG 199

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
            Q+HGL++K G    I VG  ++ +Y K    + +  MFD + ERN+I+WT++++GY   
Sbjct: 200 IQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHC 259

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
                A+    +   LGI  +      ++   S  ++L+   Q+H   I+ G  S+  L 
Sbjct: 260 QQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLE 319

Query: 400 TALVDIYAK--GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
             LV +Y++     L+    +  G +      +NA++ G       + E  +  FS+ R 
Sbjct: 320 VTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSN--LGNGEAALKCFSKMRQ 377

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           AG++ D  TF+ +L      + L  G+ +HA  +K GY +++ V N L++MYA+CGSI+ 
Sbjct: 378 AGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSIND 437

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A ++F  +   D++SWN++LS  A HG G+ A+ LFE+M+R G  PD+ + L VL AC +
Sbjct: 438 AKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRH 497

Query: 578 SGLSEGGICLFNEIEQIYGLR-PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
            GL + G+  F+ +   Y L  P  EH++ MVDL  RAG LSEA + IN+ P    P ++
Sbjct: 498 VGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVY 557

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
           + L+S  ++  N + ++  +K+LL + P D   ++L+SN+ A  G  D  A +R  M D 
Sbjct: 558 KALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDR 617

Query: 697 RLSKEAGCSWI 707
            + KE G SWI
Sbjct: 618 GVRKEPGYSWI 628



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 188/360 (52%), Gaps = 11/360 (3%)

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           +S +   +   L      P  +    ++S C ++  V  G QLH   +K G    + + +
Sbjct: 59  QSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICS 118

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+V MYGK G    A+R+FD +  RN+++W +LISGY+  G    AI  FLE + +GI  
Sbjct: 119 ALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDP 178

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
               ++ V+ GC    + +LG+Q+HG ++K G+  ++ +GT L+D+Y+KG ++ ++R++ 
Sbjct: 179 TPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMF 238

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    +    + ++++G+           MVL    +  G+  + VT++ LLS  +S   
Sbjct: 239 DLMPERNIITWTSMVAGYAH--CQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSND 296

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKC--GSIDGAFQIFKGISDRDIVSWNAML 537
           L   + +H   I+ G  ++  +   L+T+Y++C   S++   ++  G++  D +SWNA++
Sbjct: 297 LDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVI 356

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
              +  G G+ AL  F +M++ G   D  +   VL+A        G I   +E +QI+ L
Sbjct: 357 GGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAI-------GMISTLDEGKQIHAL 409



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 228/489 (46%), Gaps = 11/489 (2%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           ++V     SG + +G  +H+ ++K G  ++ +  + L+++Y K   +  AQ+LFD M  R
Sbjct: 84  RMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHR 143

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + +TW SLI GYL  G  E  + +  +M +        + S +L  C  +ED   G Q+H
Sbjct: 144 NVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVH 203

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             ++K GF  N+ VGT LI +Y        +  +F  +  +++     M+  Y    +  
Sbjct: 204 GLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPV 263

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  +   +       N  T+  ++S    +  ++  KQ+H   ++ G+     +   +V
Sbjct: 264 AAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLV 323

Query: 303 TMYGKHGMS--EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           T+Y +   S  E+  ++   ++  + ISW A+I G    G+G  A+  F +    GI  D
Sbjct: 324 TVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMD 383

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
                +V+    + S L+ G Q+H   +K GY S++ +   LV +YA+ G +  A+ +  
Sbjct: 384 LFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFS 443

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                    +N++LSG        E   + LF Q R +G++PD  TF  L+ LSA +   
Sbjct: 444 LMDRHDVISWNSLLSGCAYHGYGRE--AVELFEQMRRSGVKPDNTTF--LVVLSACRHVG 499

Query: 481 VRGRSLHAYSI-KTGYAADVIVG---NALITMYAKCGSIDGAFQIFKGISDRDIVS-WNA 535
           +  + L  + + +  Y+ +       ++++ ++++ G +  A      +      S + A
Sbjct: 500 LLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKA 559

Query: 536 MLSAYALHG 544
           +LSA  +HG
Sbjct: 560 LLSACQVHG 568


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 195/665 (29%), Positives = 332/665 (49%), Gaps = 10/665 (1%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
            HA  + +G + D      L      F+    A+ LF  +       +  L++G+  +  
Sbjct: 31  THAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDS 90

Query: 140 YESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
             S + +   + R+     +  T +  + ACS  +  +    +HA +I  G+ +NVFVG+
Sbjct: 91  PSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFVGS 147

Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +L+ +Y        A  VF G+  +D    N MI    K    + +  +F  +++     
Sbjct: 148 ALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRV 207

Query: 259 NDYTFTNVISVCYE--NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           +  T T V+    E   L V  G Q   L + FG    +  G  ++++Y K G    A  
Sbjct: 208 DSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTG--LISLYSKCGDVNTARL 265

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F  I+  +LI++ A+ISG+  +G    ++  F E L  G    SS +  +I   S   +
Sbjct: 266 LFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGH 325

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L L   +HGF +K G + +  + TA   IY K  ++  AR L D    K    +NA++SG
Sbjct: 326 LHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISG 385

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           + +      E  + LF +       P+ VT + +LS  A    L  G+ +H         
Sbjct: 386 YTQN--GSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLE 443

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
            ++ V  AL+ MYAKCG+I  A+Q+F  +S+++ V+WN M+  Y LHG G  AL L+ EM
Sbjct: 444 PNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEM 503

Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
              G+ P  ++ L VL AC ++GL   G  +F+ +   Y + P++EH+ACMVD+LGR+G+
Sbjct: 504 LHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQ 563

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           L +A+  I   P    P +W TL+    +  ++  + LAS+RL +L+P   G ++L+SN+
Sbjct: 564 LEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNI 623

Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           Y+ +    +AA +R  +   +L+K  GC+ IE++   H FV+  + H  + +IY+KL+ L
Sbjct: 624 YSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKL 683

Query: 737 NDEMK 741
             +M+
Sbjct: 684 TGKMR 688



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 184/407 (45%), Gaps = 16/407 (3%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +LK+G  +    LK G     +    LI+LY+K   ++ A+ LF  +     I + ++I 
Sbjct: 224 ELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMIS 283

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G+  +G  E  + +  ++  S E+ +  T   ++   S          IH F +KSG   
Sbjct: 284 GFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIIL 343

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N  V T+  ++Y        A ++F     K V   N MI  Y + G +E A  +F  ++
Sbjct: 344 NPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMM 403

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
            ++F PN  T T ++S C +   +  GK +H L     +   I V  A+V MY K G   
Sbjct: 404 KTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNIS 463

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           EA ++FD++SE+N ++W  +I GY   G+G +A+  + E L LG    +    +V+  CS
Sbjct: 464 EAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACS 523

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLG------TALVDIYAKGGDLKSARMLLDGFSCKY 426
                  GL   G  I H  ++  R+         +VDI  + G L+ A   +     + 
Sbjct: 524 -----HAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEP 578

Query: 427 -TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
             A +  +L   M  I  D +  +   + +RL  ++P  V +  LLS
Sbjct: 579 GPAVWGTLLGACM--IHKDTD--IARLASERLFELDPGSVGYYVLLS 621



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 119/244 (48%), Gaps = 1/244 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L L  ++H F +KSG   +   +     +Y K N +D+A+ LFD    ++ + W ++I
Sbjct: 324 GHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMI 383

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G  E+ + +  +M ++E   N  T + IL AC+ L    FG+ +H        E
Sbjct: 384 SGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLE 443

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            N++V T+L+ MY   G   EA  +F  ++ K+    N MI  Y   G    A  ++  +
Sbjct: 444 PNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEM 503

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L   + P+  TF +V+  C     V EG+++ H +  K+ +   I     +V + G+ G 
Sbjct: 504 LHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQ 563

Query: 311 SEEA 314
            E+A
Sbjct: 564 LEKA 567


>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Cucumis sativus]
 gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Cucumis sativus]
          Length = 583

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 183/567 (32%), Positives = 300/567 (52%), Gaps = 13/567 (2%)

Query: 175 RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF---- 230
           RIF  QIHA  + SG   + FV + +  M F +      +     L   + R  +F    
Sbjct: 19  RIF-RQIHAQLVTSGLVYDDFVTSKV--MEFFANFVEYGDYACDYLEQGNTRLGSFPFNS 75

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
           +I  Y      +MA  V+  ++   F P+ +TF  ++  C    G  EG+Q+HG+ VK G
Sbjct: 76  LINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLG 135

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
           ++ +  V N+++  YG  G    A ++FD +  R+++SW +LISG++++GH  +AI+ F 
Sbjct: 136 LLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFF 195

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
               + +    + L +V+  C+   +L  G  +HG  I+  +  ++ LG A++D+Y K G
Sbjct: 196 R---MDVEPSMTTLVSVLAACARNGDLCTGKGIHG-VIERRFKVNLVLGNAMLDMYVKNG 251

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
               A+ + D    +    +  +++G ++  +D  +  + LFS  R  G+ PD +  + +
Sbjct: 252 CFYEAKNIFDELPTRDIVSWTIMITGLVQ--SDHPKQSLELFSMMRTLGISPDAIILTSV 309

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           LS  AS   L  G  +H Y  + G   D+ +G A++ MYAKCG I+ A +IF  +S R+ 
Sbjct: 310 LSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNT 369

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
            +WNA+L   A+HGL   AL LFE M   G  P++I+ L +L AC + GL + G   F+ 
Sbjct: 370 FTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDN 429

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           + ++Y L P LEH+ CM+DL  RAG L EA+ L  + P     L+W  L++    + N +
Sbjct: 430 MSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIE 489

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            S      +L+L+  D+G F+L+SN+ A         ++R  M D  + K  G S IE+D
Sbjct: 490 LSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVD 549

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLN 737
            K H FV     H ++EEIY  L+L+N
Sbjct: 550 GKAHEFVVGDISHLQTEEIYKVLNLIN 576



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 232/473 (49%), Gaps = 14/473 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL-DVA-QKLFDGMLVRSAITWTSL 130
           +L++ + +HA L+ SG   D F  + ++  +A F    D A   L  G     +  + SL
Sbjct: 17  NLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRLGSFPFNSL 76

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY+     +  + +   M R     +  T  V+L+ACS       G Q+H   +K G 
Sbjct: 77  INGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGL 136

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             + +V  SLI  Y   G F  A  VF  +  +DV   N +I  + KAG  + A  VF  
Sbjct: 137 LADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFR 196

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVGNAIVTMYGKHG 309
           +   D EP+  T  +V++ C  N  +  GK +HG +  +F V   + +GNA++ MY K+G
Sbjct: 197 M---DVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKV--NLVLGNAMLDMYVKNG 251

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              EA+ +FD +  R+++SWT +I+G V+S H  +++  F     LGI  D+  L +V+ 
Sbjct: 252 CFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLS 311

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+    L+ G  +H +  + G   D+ +GTA+VD+YAK G ++ A  +    S + T  
Sbjct: 312 ACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFT 371

Query: 430 FNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LH 487
           +NA+L G  M  +     + + LF    ++G++P+ +TF  +L+       +  GR    
Sbjct: 372 WNALLCGLAMHGLV---HEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFD 428

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSA 539
             S        +     +I ++ + G ++ A ++ + +  + D++ W  +L+A
Sbjct: 429 NMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNA 481



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 173/356 (48%), Gaps = 5/356 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K        + G+ VH  ++K G   D +  N+LI  Y        A K+FD ML
Sbjct: 108 FPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEML 167

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           VR  ++W SLI G++  G ++  + +    +R + + +  T   +L AC+   D   G+ 
Sbjct: 168 VRDVVSWNSLISGFMKAGHFDEAISV---FFRMDVEPSMTTLVSVLAACARNGDLCTGKG 224

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH   I+  F+ N+ +G +++ MY  +GCF EA+N+F  L  +D+     MI    ++  
Sbjct: 225 IHG-VIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDH 283

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + +  +F  + +    P+    T+V+S C     ++ G  +H    + G+  +I +G A
Sbjct: 284 PKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTA 343

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           IV MY K G  E A ++F ++S+RN  +W AL+ G    G   +A+N F   +  G+  +
Sbjct: 344 IVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPN 403

Query: 361 SSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
                 ++  C  C  ++ G +     +  +  L  +     ++D++ + G L+ A
Sbjct: 404 EITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEA 459



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 154/355 (43%), Gaps = 39/355 (10%)

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYA---KGGDLKSARMLLDGF 422
            ++D    C NL +  Q+H   +  G + D  + + +++ +A   + GD          +
Sbjct: 7   VLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGD----------Y 56

Query: 423 SCKYTAE---------FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           +C Y  +         FN++++G++    +  +  + ++ +    G  PD  TF  LL  
Sbjct: 57  ACDYLEQGNTRLGSFPFNSLINGYVG--GEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKA 114

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            ++ +    GR +H   +K G  AD  V N+LI  Y  CG    A ++F  +  RD+VSW
Sbjct: 115 CSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSW 174

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           N+++S +   G    A+ +F  M  E   P   +++ VL AC  +G    G  +   IE+
Sbjct: 175 NSLISGFMKAGHFDEAISVFFRMDVE---PSMTTLVSVLAACARNGDLCTGKGIHGVIER 231

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKF 651
            + +  +L +   M+D+  + G   EA N+ +  P +   + W  +++  V         
Sbjct: 232 RFKVNLVLGN--AMLDMYVKNGCFYEAKNIFDELP-TRDIVSWTIMITGLVQSDHPKQSL 288

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
            + +  R L + P DA     V +  A  G LD    V   +N      + G  W
Sbjct: 289 ELFSMMRTLGISP-DAIILTSVLSACASLGTLDFGTWVHEYIN------QRGIKW 336



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/273 (20%), Positives = 128/273 (46%), Gaps = 3/273 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +GDL  G+ +H  + +    N     N ++++Y K      A+ +FD +  R  ++WT +
Sbjct: 216 NGDLCTGKGIHGVIERRFKVNLVL-GNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIM 274

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G +     +  L +   M       +    + +L AC+ L    FG  +H +  + G 
Sbjct: 275 ITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGI 334

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + ++ +GT+++ MY   GC   A  +F  ++ ++    N ++      G    A ++F  
Sbjct: 335 KWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEV 394

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHG 309
           ++ S  +PN+ TF  +++ C     V+EG++    ++  + ++ ++     ++ ++ + G
Sbjct: 395 MIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAG 454

Query: 310 MSEEAERMFDAISER-NLISWTALISGYVRSGH 341
           + EEA  +   +  + +++ W  L++     G+
Sbjct: 455 LLEEAVELARTMPMKPDVLIWGLLLNACTTVGN 487


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 192/693 (27%), Positives = 350/693 (50%), Gaps = 32/693 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAK-------------FNRLDVAQKLFDGML 120
           LKLG+A+H  +L+S   +     N+L+N+Y+              FN  D+ +++FD M 
Sbjct: 120 LKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMR 179

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV----ILEACSLLEDRI 176
            R+ + W ++I  Y+        L  A  M+R+  +       V    +  A   + D  
Sbjct: 180 KRNVVAWNTMISWYVKT----ERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYD 235

Query: 177 FGEQIHAFAIKSG--FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
               ++   +K G  F ++ FV +S I MY   GC   A  +F     ++    N MI  
Sbjct: 236 NANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295

Query: 235 YNKAGESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
           Y +      A  +FV ++ S+ F  +D TF + ++   +   +E G+QLH   +K   + 
Sbjct: 296 YVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTIL 355

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
           ++ + NAI+ MY + G    + ++F  + ER++++W  ++S +V++G   + +       
Sbjct: 356 QVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQ 415

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
             G   DS  L  ++   S   + E+G Q H + I+HG   +  + + L+D+YAK G + 
Sbjct: 416 KQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLIT 474

Query: 414 SARMLLDGFSC--KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           +A+ L +  S   +  A +NA+++G+ +    +E     +F +     + P+ VT + +L
Sbjct: 475 TAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEG--FAVFRKMIEQNVRPNAVTLASIL 532

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
                   +  G+ +H ++I+     +V VG AL+ MY+K G+I  A  +F    +++ V
Sbjct: 533 PACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSV 592

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           ++  M+S+Y  HG+G+ AL LF  M   G  PD ++ + +L AC Y+GL + G+ +F  +
Sbjct: 593 TYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSM 652

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSK 650
           E+ Y ++P  EH+ C+ D+LGR GR+ EA   +       +   +W +L+   ++    +
Sbjct: 653 EREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFE 712

Query: 651 FSILASKRLLDLEPKDA--GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
              + + +LL++E   +  G  +L+SN+YA +G  D   +VR  M    L KEAGCSW+E
Sbjct: 713 LGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVE 772

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +   ++ F++    HP+  EIY  L+ L  EMK
Sbjct: 773 VAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMK 805



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 155/611 (25%), Positives = 288/611 (47%), Gaps = 43/611 (7%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYL-DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           A  LFD +   + + W ++I G++ ++   +++L  A        KF+ +T S  L+AC+
Sbjct: 56  ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115

Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE---------------AEN 215
                  G+ +H   ++S F ++  V  SL++MY  S C  E                  
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMY--STCLTEVPYLGTAYDFNNCDLVRR 173

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +  ++V   N MI  Y K      AF +F  ++     P   +F NV    +    
Sbjct: 174 VFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSD 233

Query: 276 VEEGKQLHGLAVKFG--VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
            +    L+GL VK G   V +  V ++ + MY + G  + A  +FD   ERN   W  +I
Sbjct: 234 YDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMI 293

Query: 334 SGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
            GYV++    +AI+ F++ ++      D     + +   S    LELG QLH + +K   
Sbjct: 294 GGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSST 353

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
           +  V +  A++ +Y++ G + ++  +      +    +N ++S F++   DD E +M++F
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDD-EGLMLVF 412

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
           + Q+  G   D VT + LLSL+++      G+  HAY I+ G   + +  + LI MYAK 
Sbjct: 413 AMQK-QGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGM-DSYLIDMYAKS 470

Query: 513 GSIDGAFQIFKGIS--DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           G I  A Q+F+  S  DRD  +WNAM++ Y  +GL +    +F +M  +   P+ +++  
Sbjct: 471 GLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLAS 530

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYG--LRPILEHF----ACMVDLLGRAGRLSEAMNLI 624
           +L AC   G    G       +QI+G  +R  L         ++D+  ++G ++ A N+ 
Sbjct: 531 ILPACNPMGTIGLG-------KQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVF 583

Query: 625 NSSPFSESPLLWRTLVSV--SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGM 682
            +    ++ + + T++S      M     S+  +     ++P D+ +F+ + +  +  G+
Sbjct: 584 -AETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKP-DSVTFVAILSACSYAGL 641

Query: 683 LDEAAKVRTTM 693
           +DE  ++  +M
Sbjct: 642 VDEGLRIFQSM 652



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 121/288 (42%), Gaps = 25/288 (8%)

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC----DSS 362
           + G   +A  +FD+I     + W  +I G++ +      I+  L +  +        DS 
Sbjct: 49  RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICN---NMPIDALLFYARMRASPSPKFDSY 105

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG------------- 409
             ++ +  C+   +L+LG  LH   ++  + S   +  +L+++Y+               
Sbjct: 106 TFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDF 165

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
            +    R + D    +    +N ++S +++   +   +   +F      G+ P PV+F  
Sbjct: 166 NNCDLVRRVFDTMRKRNVVAWNTMISWYVK--TERLIEAFKMFRTMMRMGIRPTPVSFVN 223

Query: 470 LLSLSASQACLVRGRSLHAYSIKTG--YAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           +       +       L+   +K G  +  D  V ++ I MYA+ G +D A +IF    +
Sbjct: 224 VFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLE 283

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLF-EEMKREGFAPDDISILGVLQA 574
           R+   WN M+  Y  +     A+ LF + M+ E F  DD++ L  L A
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTA 331



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G + LG+ +H F ++     + F    L+++Y+K   +  A+ +F   L ++++T+T++I
Sbjct: 539 GTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMI 598

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFAI 186
             Y   G  E  L +   M  S  K +  T   IL ACS   L+++  RIF      + I
Sbjct: 599 SSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKI 658

Query: 187 KSGFEN 192
           +   E+
Sbjct: 659 QPSAEH 664


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 162/501 (32%), Positives = 281/501 (56%), Gaps = 7/501 (1%)

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            H   HL S +  P    +   I+ C ++  +++ +++H          +  + N+++ +
Sbjct: 36  LHDLDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHL 95

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G   EA ++FD +  ++++SWT+LI+GY ++    +AI      L      +    
Sbjct: 96  YCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTF 155

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           A+++      ++  +G Q+H  A+K  +  DV +G+AL+D+YA+ G +  A  + D    
Sbjct: 156 ASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS 215

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    +NA++SGF  K   D E  +++F++ +  G E    T+S + S  A    L +G+
Sbjct: 216 KNGVSWNALISGFARK--GDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGK 273

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +HA+ IK+       VGN ++ MYAK GS+  A ++F+ + ++D+V+WN+ML+A+A +G
Sbjct: 274 WVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
           LGK A+  FEEM++ G   + IS L +L AC + GL + G   F+ I++ Y L P +EH+
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHY 392

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
             +VDLLGRAG L+ A+  I   P   +  +W  L++  ++  N+K    A+  +  L+P
Sbjct: 393 VTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP 452

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
            D+G  +L+ N+YA  G  D AA+VR  M    + KE  CSW+EI++ +H FVA+   HP
Sbjct: 453 DDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHP 512

Query: 725 ESEEIYSKLDLLNDEMKLKVK 745
            +EEIY     + DE+ +K++
Sbjct: 513 RAEEIYK----MWDEISMKIR 529



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 172/358 (48%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S +L   + +HA L  S    D F  N+LI+LY K   +  A K+FD M  +  ++WTSL
Sbjct: 64  SKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSL 123

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY  +      +G+   M +   K N  T + +L+A     D   G QIHA A+K  +
Sbjct: 124 IAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDW 183

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             +V+VG++L+ MY   G    A  VF  L  K+    N +I  + + G+ E A  VF  
Sbjct: 184 HEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAE 243

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  + FE   +T++++ S       +E+GK +H   +K        VGN ++ MY K G 
Sbjct: 244 MQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGS 303

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             +A ++F+ +  ++L++W ++++ + + G G +A++ F E    GI  +      ++  
Sbjct: 304 MIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTA 363

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           CS    ++ G        ++    ++     +VD+  + G L  A + +     + TA
Sbjct: 364 CSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTA 421



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 178/387 (45%), Gaps = 11/387 (2%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           + AC+  ++     +IHA    S F  + F+  SLI +Y   G   EA  VF  +  KD+
Sbjct: 58  ITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDM 117

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV--CYENLGVEEGKQLH 283
                +I  Y +      A  +   +L   F+PN +TF +++     Y + G+  G Q+H
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGI--GGQIH 175

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
            LAVK     ++ VG+A++ MY + G  + A  +FD +  +N +SW ALISG+ R G G 
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
            A+  F E    G        +++    +    LE G  +H   IK        +G  ++
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTML 295

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D+YAK G +  AR + +    K    +N++L+ F +     E   +  F + R +G+  +
Sbjct: 296 DMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKE--AVSHFEEMRKSGIYLN 353

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQ- 520
            ++F  +L+  +    +  G+  H + +   Y  +  + +   ++ +  + G ++ A   
Sbjct: 354 QISFLCILTACSHGGLVKEGK--HYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVF 411

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGK 547
           IFK   +     W A+L+A  +H   K
Sbjct: 412 IFKMPMEPTAAVWGALLAACRMHKNAK 438



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 1/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+K      D  +G  +HA  +K     D +  + L+++YA+  ++D+A  +FD +  ++
Sbjct: 158 LLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKN 217

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W +LI G+   GD E+ L +  +M R+  +    T S I  A + +     G+ +HA
Sbjct: 218 GVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHA 277

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             IKS  +   FVG +++ MY  SG   +A  VF  +  KD+   N M+  + + G  + 
Sbjct: 278 HMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKE 337

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A   F  +  S    N  +F  +++ C     V+EGK    +  ++ +  EI     +V 
Sbjct: 338 AVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVD 397

Query: 304 MYGKHGMSEEA-ERMFDAISERNLISWTALISG 335
           + G+ G+   A   +F    E     W AL++ 
Sbjct: 398 LLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430


>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 183/586 (31%), Positives = 305/586 (52%), Gaps = 11/586 (1%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +E T   +L+AC+ L       ++H+  + +GF+ +VFV T+L+ +Y    CF  A  VF
Sbjct: 27  SEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVF 86

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +  K +   N +I  + +    + +F +   +     E +  TFT  ++ C     + 
Sbjct: 87  DQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASC----SLP 142

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           +G  +HG   K G+   + + N+I++MY +    + A  +F  + +++++SWT ++ GY+
Sbjct: 143 QGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYL 202

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
            +G   K    F +     +  DS     +I  C +  NL L + +H   +K G+     
Sbjct: 203 SAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDP 262

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +   LV +YAK  DL SAR + D    K    + +++SG+ +    +E   + LF+    
Sbjct: 263 IDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNE--ALHLFNMLLR 320

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
               P+ +T + +LS  A    L  G  +  Y +  G  +D+ V  +LI M+ KCGSI  
Sbjct: 321 TASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKK 380

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE-GFAPDDISILGVLQACI 576
           A  +F+ I ++D+  W+AM++ YA+HG+GK AL LF +M+ E G  PD I    VL AC 
Sbjct: 381 AQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACS 440

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
           +SGL E G+  F  +++ +G+ P ++H++C+VDLLGRAG +  A+  I   P      +W
Sbjct: 441 HSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVW 500

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
              +S      N +    A+K L DLEP+  G+F+L++N+Y   G   EAAK R+ +N  
Sbjct: 501 APFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSIINAR 560

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
            L KE G S IEID  +H   A G+ H ES +I+     L  EM++
Sbjct: 561 GLVKEPGWSQIEIDGAVHVLAAEGQSHLESIDIHE----LCPEMRI 602



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 236/495 (47%), Gaps = 16/495 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K       L+    +H+ +L +G Q   F    L+++Y+K      A+ +FD M 
Sbjct: 31  FPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQMP 90

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           ++S ++W S+I  +  D   +   GI   M     + +  T +  L +CSL +    G  
Sbjct: 91  IKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCSLPQ----GLS 146

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH +  K G + ++ +  S++SMY        A +VF  L  K +     ++  Y  AG+
Sbjct: 147 IHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGD 206

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
               F VF  +      P+   F N+IS C  +  +     +H L +K G   +  + N 
Sbjct: 207 VAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNL 266

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +V MY K      A R+FDA+ E+++  WT++ISGY + G+  +A++ F   L      +
Sbjct: 267 LVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPN 326

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
              LATV+  C+   +L +G ++  + + +G  SD+R+ T+L+ ++ K G +K A+ L +
Sbjct: 327 ELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFE 386

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               K  A ++A+++G+       +E + +    Q   G++PD + ++ +L L+ S + L
Sbjct: 387 RIPNKDLAVWSAMINGYAVH-GMGKEALNLFHKMQNEVGIKPDAIVYTSVL-LACSHSGL 444

Query: 481 VRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIV----SWN 534
           +     +  S++  +  +  + +   L+ +  + G ++ A    + I +  ++     W 
Sbjct: 445 IEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELA---LRTIQEMPVLVQARVWA 501

Query: 535 AMLSA-YALHGLGKG 548
             LSA Y  H L  G
Sbjct: 502 PFLSACYTHHNLELG 516



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 178/392 (45%), Gaps = 14/392 (3%)

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +S    +++TF  V+  C +   +E+  +LH   +  G    + V  A+V +Y K     
Sbjct: 21  TSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFH 80

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A  +FD +  ++L+SW ++IS + R  H  ++     +   LG+   S+     +  CS
Sbjct: 81  SARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS 140

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
               L  GL +HG+  K G    + L  +++ +Y +   +  A  +      K    +  
Sbjct: 141 ----LPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTI 196

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           IL G++   A D   V  +F+Q R   + PD + F  L+S       L+    +H+  +K
Sbjct: 197 ILGGYLS--AGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLK 254

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
           +G+     + N L+ MYAKC  +  A ++F  + ++ +  W +M+S YA  G    AL L
Sbjct: 255 SGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHL 314

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ---IYGLRPILEHFACMVD 609
           F  + R    P+++++  VL AC   G    G     EIEQ   + GL   L     ++ 
Sbjct: 315 FNMLLRTASRPNELTLATVLSACAEMGSLRMG----EEIEQYILLNGLGSDLRVQTSLIH 370

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +  + G + +A  L    P ++   +W  +++
Sbjct: 371 MFCKCGSIKKAQALFERIP-NKDLAVWSAMIN 401


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 192/564 (34%), Positives = 300/564 (53%), Gaps = 12/564 (2%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI--LEYNKA 238
           +HA A+ +G+  + FV ++L  +YF       A  VF  +   D    N ++  L  ++A
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEA 195

Query: 239 GESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            ES      F  ++      P+  T  +V+    E   V  G+ +H  A K G+     V
Sbjct: 196 VES------FARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHV 249

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
              ++++Y K G  E A  +FD + + +L+++ ALISGY  +G  G ++N F E + LG+
Sbjct: 250 LTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGL 309

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +SS L  +I   S   +  L   LHGF +K G+ ++  + TA+  ++ +  D++SAR 
Sbjct: 310 WPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARK 369

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
             D    K    +NA++SG+ +      E  + LF Q     + P+P+T S  LS  A  
Sbjct: 370 AFDTMPEKTMESWNAMISGYAQN--GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQL 427

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  G+ LH    +     +V V  ALI MYAKCGSI  A +IF  + ++++VSWNAM+
Sbjct: 428 GALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMI 487

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y LHG G  AL L+++M      P   + L VL AC + GL E G  +F  +   Y +
Sbjct: 488 AGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAI 547

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE-SPLLWRTLVSVSKLMANSKFSILAS 656
            P +EH  CMVDLLGRAG+L EA  LI+  P S   P +W  L+    +  +S  + LAS
Sbjct: 548 NPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLAS 607

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           ++L +L+P+++G ++L+SN++  +    EAA VR      +L K  G + IEI +K H F
Sbjct: 608 QKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVF 667

Query: 717 VASGKDHPESEEIYSKLDLLNDEM 740
           +A  + HP+SE IYS L+ L  +M
Sbjct: 668 MAGDRAHPQSEAIYSYLEKLTAKM 691



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 203/461 (44%), Gaps = 20/461 (4%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           DTF A+ L  LY   +R+D A+K+FD +     + W +L+ G       ES   + CD  
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCD-- 205

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
               + +  T + +L A + + D   G  +H+FA K G   +  V T LIS+Y   G   
Sbjct: 206 -GSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVE 264

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
            A  +F  +   D+   N +I  Y+  G    + ++F  L++    PN  T   +I V +
Sbjct: 265 SARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPV-H 323

Query: 272 ENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
              G +   Q LHG  +K G      V  AI T++ +    E A + FD + E+ + SW 
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           A+ISGY ++G    A+  F + + L +  +   +++ +  C+    L LG  LH    + 
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
               +V + TAL+D+YAK G +  AR + +    K    +NA+++G+   +     + + 
Sbjct: 444 DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGY--GLHGQGAEALK 501

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG------NA 504
           L+     A + P   TF     LS   AC   G     + +      D  +         
Sbjct: 502 LYKDMLDAHLLPTSATF-----LSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTC 556

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVS--WNAMLSAYALH 543
           ++ +  + G +  AF++        +    W A+L A  +H
Sbjct: 557 MVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVH 597



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 202/445 (45%), Gaps = 21/445 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            D+ +G+ VH+F  K G          LI+LY+K   ++ A+ LFD M     + + +LI
Sbjct: 226 ADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALI 285

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G   S + +  ++       N  T   ++   S     +  + +H F +KSGF 
Sbjct: 286 SGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFT 345

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            N  V T++ +++        A   F  +  K +   N MI  Y + G +EMA  +F  +
Sbjct: 346 ANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQM 405

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           +  +  PN  T ++ +S C +   +  GK LH +  +  +   + V  A++ MY K G  
Sbjct: 406 VKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSI 465

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
            EA R+F+ +  +N++SW A+I+GY   G G +A+  + + LD  +   S+   +V+  C
Sbjct: 466 SEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYAC 525

Query: 372 SVCSNLELGLQL-----HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF--SC 424
           S    +E G ++       +AI  G    +   T +VD+  + G LK A  L+  F  S 
Sbjct: 526 SHGGLVEEGWKVFRSMTDDYAINPG----IEHCTCMVDLLGRAGQLKEAFELISEFPKSA 581

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS------LSASQA 478
                + A+L   M     D    +   + Q+L  ++P+   +  LLS         S+A
Sbjct: 582 VGPGVWGALLGACMVHKDSD----LAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEA 637

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGN 503
            +VR  +     +KT     + +GN
Sbjct: 638 AVVRQEAKSRKLVKTPGYTLIEIGN 662



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 129/284 (45%), Gaps = 10/284 (3%)

Query: 47  SSVSCSERTLLFNDWPQ------LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLI 100
           SSV+     +    WP       L+ +    G   L Q +H F+LKSG   ++  +  + 
Sbjct: 296 SSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAIT 355

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
            L+ + N ++ A+K FD M  ++  +W ++I GY  +G  E  + +   M +   + N  
Sbjct: 356 TLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPI 415

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T S  L AC+ L     G+ +H    +   E NV+V T+LI MY   G   EA  +F  +
Sbjct: 416 TISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTM 475

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG- 279
             K+V   N MI  Y   G+   A  ++  +L +   P   TF +V+  C     VEEG 
Sbjct: 476 DNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGW 535

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
           K    +   + +   I     +V + G+ G  +EA   F+ ISE
Sbjct: 536 KVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEA---FELISE 576


>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 627

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 193/607 (31%), Positives = 326/607 (53%), Gaps = 29/607 (4%)

Query: 152 RSEEKFNEHTCSVI----------LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI 201
           R+  ++  HT +++          L+    L      +Q H+  + + F  N F+ T LI
Sbjct: 9   RTTSRYRYHTSAIVSLSPHNLLHLLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLI 68

Query: 202 SMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDY 261
           S Y   G    ++ VF  +  K+V   N +I  Y K  + + A  +F  +      P+DY
Sbjct: 69  SAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQM-GRCLLPDDY 127

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           T   +  V  E   +  GK +HG +++ G V +I VGN++++MY +     +A ++FD +
Sbjct: 128 TLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEM 187

Query: 322 SERNLISWTALISGYVRSGHGGKAI-----NGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
            +RN+ S+  +ISG    G+   ++     N F      G   D+  +A+++  C  C +
Sbjct: 188 PQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMC--CDS 245

Query: 377 ---LELGLQLHGFAIKHG----YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
               + G +LH + +K+G      SDV +G++L+D+Y++   L  +R + D    +    
Sbjct: 246 DGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYV 305

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQ-QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           + A+++G+++  A   E  ++LF + QR   + P+ V+   +L        L+ G+ +HA
Sbjct: 306 WTAMINGYVQNGA--PEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHA 363

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF-KGISDRDIVSWNAMLSAYALHGLGK 547
           +SIK  +   + + NALI MYAKCGS+D A ++F  G   +D ++W++++SAY LHG G+
Sbjct: 364 FSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQ 423

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL  + EM ++G  PD I+++GVL AC  SGL + GI ++N +   Y ++P +E   C+
Sbjct: 424 EALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCV 483

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VDLLGR+G+L +A++ I   P    P +W +L++ S +  NS    LA + LL+LEP++ 
Sbjct: 484 VDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENP 543

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
            ++I +SN YA     DE  +VR+ M +  L K  G SWI I  K H F  + K HP S 
Sbjct: 544 SNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSSS 603

Query: 728 EIYSKLD 734
            IY  LD
Sbjct: 604 SIYEMLD 610



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 250/514 (48%), Gaps = 30/514 (5%)

Query: 49  VSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNR 108
           VS S   LL      L+++SI    LKL Q  H+ +L +    + F    LI+ YA F  
Sbjct: 22  VSLSPHNLL-----HLLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGD 76

Query: 109 LDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA 168
             +++ +FD +  ++   W SLI GY+ +  +++ + +   M R     +++T + I + 
Sbjct: 77  SIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRCLLP-DDYTLATISKV 135

Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
              ++D + G+ IH  +++ GF +++ VG S++SMY     F +A  VF  +  ++V   
Sbjct: 136 SGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSF 195

Query: 229 NFMILEYNKAGESEMAFHV-----FVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQL 282
           N +I      G  + + +      F  +    +  + +T  +++ +C ++ G  + G++L
Sbjct: 196 NVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGREL 255

Query: 283 HGLAVKFGV----VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
           H   VK G+      ++ +G++++ MY +      + R+FD +  RN+  WTA+I+GYV+
Sbjct: 256 HCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQ 315

Query: 339 SGHGGKAINGFLEFLDLG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           +G    A+  F E      I  +   L +V+  C +   L  G Q+H F+IK  +   + 
Sbjct: 316 NGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYIS 375

Query: 398 LGTALVDIYAKGGDLKSARMLLD-GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
           L  AL+D+YAK G L  AR + D G   K    +++I+S +   +    ++ +  + +  
Sbjct: 376 LRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAY--GLHGKGQEALTTYYEML 433

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY--AADVIVGNALITMYAKCGS 514
             G++PD +T   +LS       +  G S++  S+ T Y     V +   ++ +  + G 
Sbjct: 434 QQGIKPDMITVVGVLSACCRSGLVDEGISIYN-SLTTEYEMKPSVEICGCVVDLLGRSGQ 492

Query: 515 IDGAFQIFKGISDRDIVS----WNAMLSAYALHG 544
           +D A      I +  I+     W ++L+A  +HG
Sbjct: 493 LDQALDF---IREMPIIPGPSVWGSLLTASVIHG 523


>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
 gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
          Length = 590

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 279/473 (58%), Gaps = 3/473 (0%)

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           + +   I+ C E   + EG+Q+H   +       + +G  +VTMY + G  ++A  + D 
Sbjct: 11  HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + ER+++SWT +ISGY ++    +A++ F++ L  G   +   LATV+  CS   ++  G
Sbjct: 71  MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q+H   +K  + S + +G++L+D+YAK  +++ AR + D    +      AI+SG+ +K
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 190

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
             D+E   + LF Q    GM+ + VTF+ L++  +  A L  G+ +HA  ++      V 
Sbjct: 191 GLDEE--ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 248

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           + N+LI MY+KCG +  + ++F  + +R +VSWNAML  Y  HGLG   + LF+++ +E 
Sbjct: 249 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE- 307

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             PD +++L VL  C + GL + G+ +F+ + +         H+ C++DLLGR+GRL +A
Sbjct: 308 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 367

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
           +NLI + PF  +P +W +L+   ++ AN     L +++LL++EP++AG+++++SN+YA  
Sbjct: 368 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAA 427

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           GM  +  KVR  M +  ++KE G SWI +D  +H F +S + HP  ++I +K+
Sbjct: 428 GMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKI 480



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 203/408 (49%), Gaps = 7/408 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F+++   +   I    L  G+ VHA ++ +  +   F    L+ +Y +   LD A+ + D
Sbjct: 10  FHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLD 69

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  RS ++WT++I GY     +   L +   M R+    NE+T + +L +CS  +    
Sbjct: 70  RMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQ 129

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+H+  +K+ FE+++FVG+SL+ MY  S   +EA  VF  L  +DV     +I  Y +
Sbjct: 130 GKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQ 189

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  +F  L S   + N  TFT +++       ++ GKQ+H L ++  +   +++
Sbjct: 190 KGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVAL 249

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N+++ MY K G    + R+FD + ER+++SW A++ GY R G G + I+ F + L   +
Sbjct: 250 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEV 308

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGGDLKSA 415
             DS  L  V+ GCS    ++ GL +    +K     L     G  ++D+  + G L+ A
Sbjct: 309 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG-CIIDLLGRSGRLEKA 367

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
             L++    + T      L G     A+     +V    Q+L  MEP+
Sbjct: 368 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELV---AQKLLEMEPE 412


>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 190/616 (30%), Positives = 313/616 (50%), Gaps = 8/616 (1%)

Query: 80   VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
            +   L+K G     + +  L++LY K  R+  A   FD M +R  ++W +LI GY  +G 
Sbjct: 464  IQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGY 523

Query: 140  YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
              S L +   M +      + T   +L +C  LE    G+ IH F IKSG   +  V  +
Sbjct: 524  DFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNA 583

Query: 200  LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
            L SMY   G    AE +F  +  K V   N MI  Y + G  + A  VF  ++ +  E +
Sbjct: 584  LTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVS 643

Query: 260  DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
              T   ++S+   N   E    +H   +K G+  + SV  +++ MY ++G ++ AE ++ 
Sbjct: 644  QVT---IMSLPSANANPES---IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYW 697

Query: 320  AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            ++ ++NL+S TA+I+ Y  +G+ G  +  F +   L +  DS  + +++ G +   ++ +
Sbjct: 698  SLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICI 757

Query: 380  GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
            G   HG+AIK G  +   +   L+ +Y+K  ++++   L  G   K    +N+++SG ++
Sbjct: 758  GHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQ 817

Query: 440  KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
              A      + LF Q ++ G  PD +T + LLS  +    L  G  LH+Y ++     + 
Sbjct: 818  --AGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMED 875

Query: 500  IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
             VG ALI MY KCGSI  A ++FK I    + +WNAM+S Y+ +G    AL  + EM+ +
Sbjct: 876  FVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQ 935

Query: 560  GFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
            G  PD I+ LGVL AC + GL   G   F  + ++Y + P L+H ACMV LL R G   E
Sbjct: 936  GVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEE 995

Query: 620  AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
            A+  I +        +W   +S   +    K     +K+L  L+ ++ G ++L+SN+YA 
Sbjct: 996  ALLFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAV 1055

Query: 680  QGMLDEAAKVRTTMND 695
             G  D+ A+VR  M D
Sbjct: 1056 TGRWDDVARVREMMKD 1071



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 210/435 (48%), Gaps = 17/435 (3%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           QI    IK G +  V+V T+L+ +Y   G    A N F  +  +DV   N +I  Y++ G
Sbjct: 463 QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
               A  +FV +L   F P   T   ++  C +   V +GK +HG  +K G+  +  V N
Sbjct: 523 YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKN 582

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+ +MY K G  E AE +F+ + +++++SW  +I  Y ++G   +A+  F   +  G+  
Sbjct: 583 ALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEV 642

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
                 T++   S  +N E    +H + IK G   D  + T+L+ +YA+ G    A +L 
Sbjct: 643 SQ---VTIMSLPSANANPE---SIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLY 696

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                K      AI++ + E  A +   VM  FSQ     M+PD V    +L   A    
Sbjct: 697 WSLPQKNLVSLTAIITSYAE--AGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVH 754

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           +  G   H Y+IK+G     +V N LI+MY+K  +++  F +F G+ ++ ++SWN+++S 
Sbjct: 755 ICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISG 814

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
               G    A+ LF +MK  G  PD I+I  +L  C     S+ G   F E    Y LR 
Sbjct: 815 CVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGC-----SQLGYLQFGERLHSYILRN 869

Query: 600 ILEHFACMVDLLGRA 614
            LE    M D +G A
Sbjct: 870 KLE----MEDFVGTA 880



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 227/485 (46%), Gaps = 13/485 (2%)

Query: 64   LVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
            LV +    G L+L   G+++H F +KSG   D    N L ++YAK   L+ A+ LF+ M+
Sbjct: 546  LVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMM 605

Query: 121  VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
             +S ++W ++I  Y  +G ++  + +   M  +  + ++ T        SL       E 
Sbjct: 606  DKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTI------MSLPSANANPES 659

Query: 181  IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
            IH + IK G  ++  V TSLI MY   G    AE ++  L  K++  +  +I  Y +AG 
Sbjct: 660  IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGN 719

Query: 241  SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
              +    F  +   + +P+     +++    + + +  G   HG A+K G+     V N 
Sbjct: 720  LGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNG 779

Query: 301  IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
            +++MY K    E    +F  + E+ LISW ++ISG V++G    AI  F +    G   D
Sbjct: 780  LISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPD 839

Query: 361  SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            +  +A+++ GCS    L+ G +LH + +++    +  +GTAL+ +Y K G +  A  +  
Sbjct: 840  AITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFK 899

Query: 421  GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
                   A +NA++SG+       E   +  +S+ +  G+EPD +TF  +L+       +
Sbjct: 900  SIGKPCLATWNAMISGY--SCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLI 957

Query: 481  VRGRSLHAYSIKTGYAADVIVGNA-LITMYAKCGSIDGAFQIFKGI-SDRDIVSWNAMLS 538
              GR       K       +   A ++ + A+ G  + A    K +  + D   W A LS
Sbjct: 958  HEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFLS 1017

Query: 539  AYALH 543
            A  +H
Sbjct: 1018 ACCIH 1022



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 40/377 (10%)

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           E  Q+    +K G+ + + V  A++ +Y K G    A   FD +  R+++SW ALI GY 
Sbjct: 460 EAIQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYS 519

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           R+G+   A+  F++ L LG C   + L  ++  C     +  G  +HGF IK G   D +
Sbjct: 520 RNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQ 579

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +  AL  +YAK GDL++A  L +    K    +N ++  + +    DE   M +F +   
Sbjct: 580 VKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDE--AMFVFKRMIG 637

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           AG+E   VT   L S +A+        S+H Y+IK G A D  V  +LI MYA+ GS D 
Sbjct: 638 AGVEVSQVTIMSLPSANANP------ESIHCYTIKVGLADDASVVTSLICMYARYGSTDH 691

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA--- 574
           A  ++  +  +++VS  A++++YA  G     +  F +M +    PD +++L +L     
Sbjct: 692 AELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIAD 751

Query: 575 -------------CIYSGL------SEGGICL---FNEIEQIYGL------RPILEHFAC 606
                         I SGL      + G I +   FN +E ++GL      +P++  +  
Sbjct: 752 PVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLIS-WNS 810

Query: 607 MVDLLGRAGRLSEAMNL 623
           ++    +AGR S A+ L
Sbjct: 811 VISGCVQAGRASHAIEL 827


>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Brachypodium distachyon]
          Length = 697

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 191/687 (27%), Positives = 358/687 (52%), Gaps = 16/687 (2%)

Query: 61  WPQLVKISIGSGDLKLGQA---VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           W  L K+   + D     A   +HA LL+SG  + +    +  ++ A +    +A+ LFD
Sbjct: 4   WQPLQKLLEAAADSSTPVAAARLHAHLLRSGHLHSSHHLTS--HVLASYPT-GLARHLFD 60

Query: 118 GMLVRSAITWTSLIKGYLDDGDY-ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
            + V +     +L++ ++    + +++L I C   R +      T S++L+AC++L    
Sbjct: 61  EIPVPTPRLANALLRAHVRARQWCDALLLIPCLRVRPDA----FTLSLLLKACAMLPALA 116

Query: 177 FGEQIHAFAIKSGFE-NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
            G  +HA AI+S     + FV  +L+ MY        + N +   +  D+     M+  Y
Sbjct: 117 HGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGY 176

Query: 236 NKAGESEMAFHVFV-HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
            +   +  A   F  H++   F P+  T  +VIS   +   V  G+  H   ++     +
Sbjct: 177 EQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYD 236

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
           + + NAI+  Y + G  + A R+F+ ++E+++++W+ +++GYV+SG   +A+  + + ++
Sbjct: 237 LVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVE 296

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            GI  ++  + +V+  CS+  ++E G ++H  A+K G   ++ + TALVD+Y K    + 
Sbjct: 297 AGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEE 356

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A  L    S K    +  ++SGF +    DE   M +F      G  PD VT  ++L+  
Sbjct: 357 AMQLFCRMSKKDAVAWAVVISGFTQNGLPDES--MRVFKCMLFGGPFPDAVTMVKVLAAC 414

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           +    + +   LH Y + TG+   + V  AL+ +Y+KCG++  A ++F+   ++D+V W+
Sbjct: 415 SESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWS 474

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           +M+S Y +HGLG+ A+ LF+ M      P+ ++ + VL AC +SGL + G  +F  + Q+
Sbjct: 475 SMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQV 534

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
           YG+ P   H + MVDLLGRAG L EA  L++ +  +++   W  L++  +   +++ S +
Sbjct: 535 YGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAH-TWCALLAACRAHHDTEMSEV 593

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
            + +LL L+P  AG + L++N+Y        A + R  + D  L+K  GCS +E+++ +H
Sbjct: 594 VAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVELNNVMH 653

Query: 715 HFVASGKDHPESEEIYSKLDLLNDEMK 741
            F A  + H + E+I   L   +  +K
Sbjct: 654 TFTAGERPHKDWEKISRLLREFSRTLK 680


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 173/588 (29%), Positives = 312/588 (53%), Gaps = 7/588 (1%)

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLI--SMYFHSGCFREA 213
           +F E+  S+IL+ C   +D    +Q+HA  +K+    +  +  +++  +          A
Sbjct: 18  QFPENPKSLILQQCKTPKDL---QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYA 74

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
            ++F  +   +    N MI         + A  +F  +     + + +TF++V+  C   
Sbjct: 75  LSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRM 134

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             + EG+Q+H L +K G      V N ++ MY   G    A  +FD + ER++++W +++
Sbjct: 135 KALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSML 194

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
           SGY ++G   + +  F + L+L I  D   + +V+  C   +NLE+G  +  + +  G  
Sbjct: 195 SGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLR 254

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
            +  L T+L+D+YAK G + +AR L D    +    ++A++SG+ +  AD  ++ + LF 
Sbjct: 255 RNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ--ADRCKEALNLFH 312

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           + +   + P+ VT   +L   A       G+ +H Y  K      V +G  LI  YAKCG
Sbjct: 313 EMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCG 372

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            ID + ++FK +S +++ +W A++   A +G GK AL  F  M      P+D++ +GVL 
Sbjct: 373 YIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLS 432

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC ++ L + G  LFN + + + + P +EH+ CMVD+LGRAG L EA   I++ PF  + 
Sbjct: 433 ACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNA 492

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           ++WRTL++  +   N + +  + + +  LEP  +G +IL+SN YA  G +++A +VR+ +
Sbjct: 493 VVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLI 552

Query: 694 NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            +  + K  GCS IE+D  +H F +   +H  S+EI+  LD +  ++K
Sbjct: 553 KEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIK 600



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 233/474 (49%), Gaps = 14/474 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKF--NRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           Q VHA LLK+    D      ++   A    + +D A  +F+ +    +  +  +I+G  
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
                ++ L +   M+    + ++ T S +L+ACS ++    GEQ+HA  +KSGF++N F
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  +LI MY + G    A +VF G+  + +   N M+  Y K G  +    +F  +L   
Sbjct: 158 VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR 217

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            E +D T  +V+  C     +E G+ +    V  G+ R  ++  +++ MY K G  + A 
Sbjct: 218 IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTAR 277

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++FD + +R++++W+A+ISGY ++    +A+N F E     +  +   + +V+  C++  
Sbjct: 278 KLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG 337

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
             E G  +H +  K      V LGT L+D YAK G +  +  +    S K    + A++ 
Sbjct: 338 AYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQ 397

Query: 436 GFMEKIADDEEDVMVL--FSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSLHAYSIK 492
           G    +A++ E  M L  FS      ++P+ VTF  +LS + S ACLV +GR L   S++
Sbjct: 398 G----LANNGEGKMALEFFSSMLENDVKPNDVTFIGVLS-ACSHACLVDQGRHLFN-SMR 451

Query: 493 TGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
             +  +  + +   ++ +  + G ++ A+Q    +    + V W  +L++   H
Sbjct: 452 RDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAH 505



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 171/351 (48%), Gaps = 3/351 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ VHA +LKSG +++ F  N LI +YA   ++ VA+ +FDGM  RS + W S++ G
Sbjct: 137 LREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSG 196

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G ++ V+ +   +     +F++ T   +L AC  L +   GE I  + +  G   N
Sbjct: 197 YTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRN 256

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             + TSLI MY   G    A  +F  +  +DV   + MI  Y +A   + A ++F  +  
Sbjct: 257 NTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQK 316

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            +  PN+ T  +V+  C      E GK +H    K  +   +++G  ++  Y K G  + 
Sbjct: 317 GNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDR 376

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           +  +F  +S +N+ +WTALI G   +G G  A+  F   L+  +  +      V+  CS 
Sbjct: 377 SVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSH 436

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGT--ALVDIYAKGGDLKSARMLLDGF 422
              ++ G  L   +++  +  + R+     +VDI  + G L+ A   +D  
Sbjct: 437 ACLVDQGRHLFN-SMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNM 486



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 132/265 (49%), Gaps = 2/265 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            +L++G+ +  +++  G + +     +LI++YAK  ++D A+KLFD M  R  + W+++I
Sbjct: 236 ANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMI 295

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY      +  L +  +M +     NE T   +L +C++L     G+ +H +  K   +
Sbjct: 296 SGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMK 355

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             V +GT LI  Y   G    +  VF+ +++K+V     +I      GE +MA   F  +
Sbjct: 356 LTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSM 415

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L +D +PND TF  V+S C     V++G+ L + +   F +   I     +V + G+ G 
Sbjct: 416 LENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGF 475

Query: 311 SEEAERMFDAIS-ERNLISWTALIS 334
            EEA +  D +    N + W  L++
Sbjct: 476 LEEAYQFIDNMPFPPNAVVWRTLLA 500


>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 682

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 183/618 (29%), Positives = 311/618 (50%), Gaps = 38/618 (6%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
           H+ + +L AC  +   + G QIHA  + SG E +  +   L++ Y      REA+++   
Sbjct: 45  HSAASLLSACVDVLAFVPGLQIHAHCVSSGVEYHSALVPKLVTFYSAFNLHREAQSINEN 104

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
                    N +I  Y K    E     +  ++S    P+ +T+ +V+  C E L V  G
Sbjct: 105 SDILHPLPWNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVASG 164

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS----- 334
           + +HG          + V NA+++MY + G    A R+FD +SER+ +SW A+I+     
Sbjct: 165 RVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASV 224

Query: 335 ------------------------------GYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
                                         GY+ +G+   A+       +     D   +
Sbjct: 225 GMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAM 284

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
              +  CS+   + LG ++HG AI   Y     +   L+ +Y+K  DL++A ++      
Sbjct: 285 IIGLKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEE 344

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
                +N+I+SG+ +   +  E+   L  +  LAG +P+ +T + +L L A  A L  G+
Sbjct: 345 NSLCTWNSIISGYAQ--VNKSEEASYLLREMLLAGFQPNFITLASILPLCARIANLQHGK 402

Query: 485 SLHAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             H Y ++     D  ++ N+L+ +YAK G I  A Q+   +S+ D V++ +++  Y   
Sbjct: 403 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQ 462

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G+ AL LF+EM R G  PD ++++ VL AC +S L   G  LF +++  YG+RP L+H
Sbjct: 463 GEGRVALALFDEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQH 522

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           F+CMVDL GRAG L++A ++I+  P+  S   W TL++   +  N++    A+++LL+++
Sbjct: 523 FSCMVDLYGRAGFLAKAKDIIHRMPYEPSGATWATLLNACHIHGNTEIGKWAAEKLLEMK 582

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P++ G ++L++NMYA  G   + A+VRT M DL + K+ GC+WI  DS    F      +
Sbjct: 583 PENPGYYVLIANMYATAGSWSKLAEVRTIMRDLGVRKDPGCAWINTDSGFSLFSVGDTSN 642

Query: 724 PESEEIYSKLDLLNDEMK 741
           P++ + Y  LD LN  MK
Sbjct: 643 PQACDTYPLLDGLNQLMK 660



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 191/434 (44%), Gaps = 38/434 (8%)

Query: 20  LPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQA 79
           L PL   V I +++ N   +         VS   R   F  +P ++K    + D+  G+ 
Sbjct: 108 LHPLPWNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFT-YPSVLKACGETLDVASGRV 166

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR----------------- 122
           VH  +  S  +   +  N LI++Y +F  + +A++LFD M  R                 
Sbjct: 167 VHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGM 226

Query: 123 ------------------SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
                             S ITW  +  GYL  G+Y   LG+   M       +     +
Sbjct: 227 WSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMII 286

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
            L+ACSL+     G++IH  AI   ++    V  +LI+MY      R A  VF+      
Sbjct: 287 GLKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEENS 346

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +   N +I  Y +  +SE A ++   +L + F+PN  T  +++ +C     ++ GK+ H 
Sbjct: 347 LCTWNSIISGYAQVNKSEEASYLLREMLLAGFQPNFITLASILPLCARIANLQHGKEFHC 406

Query: 285 LAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
             ++    ++ + + N++V +Y K G    A+++ + +SE + +++T+LI GY   G G 
Sbjct: 407 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQGEGR 466

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH-GFAIKHGYLSDVRLGTAL 402
            A+  F E +  GI  D   +  V+  CS    +  G +L      K+G    ++  + +
Sbjct: 467 VALALFDEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCM 526

Query: 403 VDIYAKGGDLKSAR 416
           VD+Y + G L  A+
Sbjct: 527 VDLYGRAGFLAKAK 540



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 125/525 (23%), Positives = 222/525 (42%), Gaps = 45/525 (8%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  +HA  + SG +  +     L+  Y+ FN    AQ + +   +   + W  LI  Y  
Sbjct: 63  GLQIHAHCVSSGVEYHSALVPKLVTFYSAFNLHREAQSINENSDILHPLPWNVLIASYAK 122

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +  +E V+     M     + +  T   +L+AC    D   G  +H     S ++ +++V
Sbjct: 123 NELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVASGRVVHGSIEVSSYKCSLYV 182

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +LISMY   G    A  +F  ++ +D    N +I  Y   G    AF +F  +  S  
Sbjct: 183 CNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMWSEAFELFDKMRFSGV 242

Query: 257 EPNDYTFTNVISVCYENLG------------------------------------VEEGK 280
           E +  T+ N+IS  Y + G                                    +  GK
Sbjct: 243 EVSVITW-NIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGK 301

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
           ++HGLA+        +V N ++TMY K      A  +F    E +L +W ++ISGY +  
Sbjct: 302 EIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEENSLCTWNSIISGYAQVN 361

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRLG 399
              +A     E L  G   +   LA+++  C+  +NL+ G + H + ++     D   L 
Sbjct: 362 KSEEASYLLREMLLAGFQPNFITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLW 421

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            +LVD+YAK G + +A+ + +  S      + +++ G+  +   +    + LF +   +G
Sbjct: 422 NSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQ--GEGRVALALFDEMIRSG 479

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLH-AYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           ++PDPVT   +LS  +    +  G+ L      K G    +   + ++ +Y + G +  A
Sbjct: 480 IKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLYGRAGFLAKA 539

Query: 519 FQIFKGIS-DRDIVSWNAMLSAYALHG---LGKGALLLFEEMKRE 559
             I   +  +    +W  +L+A  +HG   +GK A     EMK E
Sbjct: 540 KDIIHRMPYEPSGATWATLLNACHIHGNTEIGKWAAEKLLEMKPE 584



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 3/267 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G ++LG+ +H   +           N LI +Y+K + L  A  +F      S  TW S+I
Sbjct: 295 GAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEENSLCTWNSII 354

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-F 190
            GY      E    +  +M  +  + N  T + IL  C+ + +   G++ H + ++   F
Sbjct: 355 SGYAQVNKSEEASYLLREMLLAGFQPNFITLASILPLCARIANLQHGKEFHCYILRRKCF 414

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           ++   +  SL+ +Y  SG    A+ V   ++  D      +I  Y   GE  +A  +F  
Sbjct: 415 KDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQGEGRVALALFDE 474

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH-GLAVKFGVVREISVGNAIVTMYGKHG 309
           ++ S  +P+  T   V+S C  +  V EG++L   +  K+G+   +   + +V +YG+ G
Sbjct: 475 MIRSGIKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLYGRAG 534

Query: 310 MSEEAERMFDAIS-ERNLISWTALISG 335
              +A+ +   +  E +  +W  L++ 
Sbjct: 535 FLAKAKDIIHRMPYEPSGATWATLLNA 561


>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 589

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 178/575 (30%), Positives = 303/575 (52%), Gaps = 8/575 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L  C+ ++  + G  +HA A+K+G  +++ V   +I++Y   G    A  +F  ++ ++
Sbjct: 9   LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +   + +I  Y++ G+  +A ++F  +      PN+Y F +VIS C     + +G Q+H 
Sbjct: 69  LVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGLQVHA 125

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            ++K G V    V NA+++MY K G+  +A  + + +SE N +S+ ALI+G+V +    K
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
            I  F      G   D    + ++  C+   +   G+QLH   IK        +G  ++ 
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIIT 245

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSG--FMEKIADDEEDVMVLFSQQRLAGMEP 462
           +Y+K   ++ A  +      K    +N +++   F +   D E  + V      +  ++P
Sbjct: 246 MYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCK---DHERALRVFRDMLDVCFVKP 302

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D  TF+ +L+  A  A +  G+ +H + I+T    DV V NAL+ MYAKCGSI  ++ +F
Sbjct: 303 DDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVF 362

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
           +  SDR++VSWN +++A+  HGLG  AL  FE+MK  G  PD ++ +G+L AC ++GL E
Sbjct: 363 RRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVE 422

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            G   FN +E+ YG+ P +EHF+C++DLLGRAGRL EA   +   PF   P++  +L+S 
Sbjct: 423 EGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSA 482

Query: 643 SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
            +L  +       + +LL L+P     ++L+SN+YA   M    A+    +    L KE 
Sbjct: 483 CRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEP 542

Query: 703 GCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           G S I++      F      H   EEI   + +LN
Sbjct: 543 GHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLN 577



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 232/472 (49%), Gaps = 10/472 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G ++HA  LK+G  +D   +N++INLY+K   +  A+++FD M  R+ ++W+++I GY  
Sbjct: 22  GLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQ 81

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G     L +   M       NE+  + ++ AC+ L     G Q+HA ++K G  +  FV
Sbjct: 82  TGQPLLALNLFSQMRIVP---NEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFV 138

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +LISMY   G   +A  V   ++  +    N +I  + +  + E     F  +    F
Sbjct: 139 SNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGF 198

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
            P+ +TF+ ++ +C        G QLH   +K  +     +GN I+TMY K  + EEAE+
Sbjct: 199 APDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEK 258

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-ICCDSSCLATVIDGCSVCS 375
           +F  I E++LISW  L++         +A+  F + LD+  +  D    A V+  C+  +
Sbjct: 259 VFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLA 318

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           ++  G Q+HG  I+     DV +  ALV++YAK G +K++  +    S +    +N I++
Sbjct: 319 SIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIA 378

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
            F           +  F + +  G+ PD VTF  LL+ + + A LV    ++  S++  Y
Sbjct: 379 AFGNHGLGAR--ALEHFEKMKTVGIHPDSVTFVGLLT-ACNHAGLVEEGQVYFNSMEEAY 435

Query: 496 A--ADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
               ++   + LI +  + G +  A +  + +    D +   ++LSA  LHG
Sbjct: 436 GIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHG 487



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 171/346 (49%), Gaps = 6/346 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G  VHA  LK G  + +F +N LI++Y K      A  + + M   +A+++ +LI G
Sbjct: 117 LSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAG 176

Query: 134 YLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           ++++   E   GI       ++ F  +  T S +L  C+  +D   G Q+H   IK   E
Sbjct: 177 FVENQQPEK--GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLE 234

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           ++ F+G  +I+MY       EAE VF  +  KD+   N ++       + E A  VF  +
Sbjct: 235 DSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDM 294

Query: 252 LSSDF-EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L   F +P+D+TF  V++ C     +  GKQ+HG  ++    +++ V NA+V MY K G 
Sbjct: 295 LDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGS 354

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            + +  +F   S+RNL+SW  +I+ +   G G +A+  F +   +GI  DS     ++  
Sbjct: 355 IKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTA 414

Query: 371 CSVCSNLELG-LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           C+    +E G +  +     +G   ++   + L+D+  + G L+ A
Sbjct: 415 CNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEA 460



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 116/212 (54%), Gaps = 5/212 (2%)

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           + +++  C+       GL LH  A+K G LSD+ +   ++++Y+K G++  AR + D  S
Sbjct: 6   IGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMS 65

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    ++AI+SG+ +         + LFSQ R+    P+   F+ ++S  AS   L +G
Sbjct: 66  DRNLVSWSAIISGYDQ--TGQPLLALNLFSQMRIV---PNEYVFASVISACASLTALSQG 120

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             +HA S+K G  +   V NALI+MY KCG    A  +   +S+ + VS+NA+++ +  +
Sbjct: 121 LQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVEN 180

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
              +  +  F+ M+++GFAPD  +  G+L  C
Sbjct: 181 QQPEKGIEAFKVMRQKGFAPDRFTFSGLLGIC 212



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 124/260 (47%), Gaps = 2/260 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ I     D   G  +H  ++K   ++  F  N +I +Y+KFN ++ A+K+F  +  + 
Sbjct: 208 LLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKD 267

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
            I+W +L+       D+E  L +  DM      K ++ T + +L AC+ L     G+QIH
Sbjct: 268 LISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIH 327

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
              I++    +V V  +L++MY   G  + + +VFR  + +++   N +I  +   G   
Sbjct: 328 GHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGA 387

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK-QLHGLAVKFGVVREISVGNAI 301
            A   F  + +    P+  TF  +++ C     VEEG+   + +   +G+   I   + +
Sbjct: 388 RALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCL 447

Query: 302 VTMYGKHGMSEEAERMFDAI 321
           + + G+ G  +EAE   + +
Sbjct: 448 IDLLGRAGRLQEAEEYMEKL 467



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 4/121 (3%)

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
           P     LL   A     + G SLHA ++KTG  +D+IV N +I +Y+KCG++  A ++F 
Sbjct: 3   PEAIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFD 62

Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSE 582
            +SDR++VSW+A++S Y   G    AL LF +M+     P++     V+ AC   + LS+
Sbjct: 63  EMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQ 119

Query: 583 G 583
           G
Sbjct: 120 G 120


>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
 gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 181/612 (29%), Positives = 318/612 (51%), Gaps = 6/612 (0%)

Query: 99  LINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE---E 155
           L++ YA    L  A+ +FDG     A ++  ++   +    +   + +  DM R     E
Sbjct: 70  LLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPE 129

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
             ++   S+ L+AC    D  +G ++H  A+K G  +  FV  SL+ MY  +G    A  
Sbjct: 130 AQDDFVLSLALKACIRSADYGYGTRLHCDAVKVGGADG-FVMNSLVDMYAKAGDLECARK 188

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +  ++V     M+    + G +     +F  +   +  P++YT   VI+ C   +G
Sbjct: 189 VFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIG 248

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           + +G+ +HG  +K G++    +  A++ MY K G  E+A+ +FD +S  +L+ WT +I G
Sbjct: 249 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVG 308

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
           Y ++G+   A+  FL+     I  +S  +ATV+   +   +L LG  +HG A+K G +  
Sbjct: 309 YTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEY 368

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
             +  ALVD+YAK   +  A  +    S K    +N++LSG+ E   +   D ++LF Q 
Sbjct: 369 TVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAEN--NMCNDALMLFKQM 426

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
            L G  PD ++    LS S     L+ G+S H Y++K  + +++ V  AL+ +Y KCG +
Sbjct: 427 SLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDL 486

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             A ++F  ++DR+ V+W AM+  Y + G   G++ LF EM ++G  P+D++   +L  C
Sbjct: 487 PSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTC 546

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            ++G+       F+ + Q + + P ++H+ACMVD+L RAG L EA+  I++ P      +
Sbjct: 547 SHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSV 606

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W   +   +L +  +F   A KR++ L P+    ++L+SN+Y   GM +++  +R  M +
Sbjct: 607 WGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQE 666

Query: 696 LRLSKEAGCSWI 707
             L K  G S I
Sbjct: 667 KGLVKLPGYSSI 678


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1134

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 180/566 (31%), Positives = 306/566 (54%), Gaps = 9/566 (1%)

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
           S +LE C +LE  IF      F + SG   N+     LI MY        A  VF  +  
Sbjct: 376 SHVLENCYVLEFIIFTNS--NFRL-SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPE 432

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           ++V     ++  +   G+   +  +F  +      PN++TF+  +  C     +E+G Q+
Sbjct: 433 RNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 492

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           HG  +K G    + VGN++V MY K G   EAE++F  +  R+LISW A+I+GYV +G+G
Sbjct: 493 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYG 552

Query: 343 GKAIN--GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY--LSDVRL 398
            +A+   G ++   +    D   L +++  CS    +  G Q+HGF ++ G+   S   +
Sbjct: 553 SRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 612

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
             +LVD+Y K G+L SAR   D    K    +++++ G+ ++   D  + M LF + +  
Sbjct: 613 TGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQE--GDFVEAMGLFKRLQEL 670

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
             + D    S ++ + A  A L +G+ + A  +K     +  V N+L+ MY KCG +D A
Sbjct: 671 SSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEA 730

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            + F  +  +D++SW  M++ Y  HGLGK A+ +F +M R    PD++  L VL AC +S
Sbjct: 731 EKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHS 790

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           G+ + G  LF+++ +  G++P +EH+AC+VDLLGRAGRL EA +L+++ P   +  +W+T
Sbjct: 791 GMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQT 850

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+S+ ++  + +      K LL ++ K+  +++++SN+Y   G  +E    R   +   L
Sbjct: 851 LLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLYGQAGYWNEQGNARELGSIKGL 910

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHP 724
            KEAG SW+EI+ ++H F +    HP
Sbjct: 911 QKEAGMSWVEIEREVHFFRSGEDSHP 936



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 228/477 (47%), Gaps = 13/477 (2%)

Query: 87  SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGI 146
           SGS  +   +N LI++Y K     +A K+FD M  R+ ++WT+L+ G++ +GD    L +
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457

Query: 147 ACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH 206
             +M R     NE T S  L+AC LL     G QIH F +K GFE  V VG SL+ MY  
Sbjct: 458 FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517

Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE--PNDYTFT 264
            G   EAE VFR +  + +   N MI  Y  AG    A   F  +  +  +  P+++T T
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577

Query: 265 NVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +++  C     +  GKQ+HG  V+  F      ++  ++V +Y K G    A + FD I 
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           E+ +ISW++LI GY + G   +A+  F    +L    DS  L+++I   +  + L+ G Q
Sbjct: 638 EKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQ 697

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +    +K     +  +  +LVD+Y K G +  A         K    +  +++G+ +   
Sbjct: 698 MQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGL 757

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIV 501
              +  + +F++     +EPD V +  +LS  +    +  G  L +  ++T G    V  
Sbjct: 758 G--KKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEH 815

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGK--GALLL 552
              ++ +  + G +  A  +   +  +  V  W  +LS   +HG   LGK  G +LL
Sbjct: 816 YACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILL 872



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 184/357 (51%), Gaps = 5/357 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G  +H F LK G +      N+L+++Y+K  R++ A+K+F  M+ RS I+W ++I G
Sbjct: 486 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAG 545

Query: 134 YLDDGDYESVLGIACDMYRS--EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           Y+  G     L     M  +  +E+ +E T + +L+ACS       G+QIH F ++SGF 
Sbjct: 546 YVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 605

Query: 192 --NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             ++  +  SL+ +Y   G    A   F  +  K +   + +IL Y + G+   A  +F 
Sbjct: 606 CPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFK 665

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            L     + + +  +++I V  +   +++GKQ+  L VK     E SV N++V MY K G
Sbjct: 666 RLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCG 725

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           + +EAE+ F  +  +++ISWT +I+GY + G G KA++ F + L   I  D  C   V+ 
Sbjct: 726 LVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLS 785

Query: 370 GCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            CS    ++ G +L    ++  G    V     +VD+  + G LK A+ L+D    K
Sbjct: 786 ACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIK 842



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 8/277 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSG--SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           L+K    +G +  G+ +H FL++SG    +      +L++LY K   L  A+K FD +  
Sbjct: 579 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKE 638

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           ++ I+W+SLI GY  +GD+   +G+   +     + +    S I+   +       G+Q+
Sbjct: 639 KTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQM 698

Query: 182 HAFAIK--SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            A  +K  SG E +  V  SL+ MY   G   EAE  F  +  KDV     MI  Y K G
Sbjct: 699 QALVVKLPSGLETS--VSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHG 756

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVG 298
             + A  +F  +L  + EP++  +  V+S C  +  ++EG++L   L    G+   +   
Sbjct: 757 LGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHY 816

Query: 299 NAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
             +V + G+ G  +EA+ + D +  + N+  W  L+S
Sbjct: 817 ACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLS 853


>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
 gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
          Length = 810

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 191/639 (29%), Positives = 330/639 (51%), Gaps = 17/639 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L +G+AVH  +L+   + D F   +L+N+YAK   +  A + F  M VR+ ++WT+ I 
Sbjct: 185 ELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIA 244

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G++ D +  S + +  +M R+    N++T + IL AC+ +       QIH   +K+    
Sbjct: 245 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 304

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  V  +LIS Y + G    +E VF        R +    +    +G S  +    V LL
Sbjct: 305 DCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFI----SGVSNHSLLRSVQLL 360

Query: 253 SSDF----EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
              F     PND  + +V S       +E G QLH  A+K G +  I VG+A+ TMY + 
Sbjct: 361 RRMFHQGLRPNDKCYASVFSSVNS---IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRC 417

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              +++ ++F+ + ER+ +SWTA+++G+   GH  +A   F   +  G   D   L  ++
Sbjct: 418 DNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAIL 477

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+    L  G ++HG  ++  Y     +    + +Y+K   +++AR + D    K   
Sbjct: 478 SACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQV 536

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +++++SG+      +E   + LF     A +  D    S +LSL A  A     + LH 
Sbjct: 537 MWSSMISGYATNGCGEE--AISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHG 594

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y+IK G  +D  V ++L+ +Y++ G++D + ++F  IS  D+V+W  ++  YA HG  + 
Sbjct: 595 YAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQN 654

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL +F+ M + G  PD + ++ VL AC  +GL E G   FN +   YG+ P L+H+ CMV
Sbjct: 655 ALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMV 714

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGR+GRL+EA   ++S P     ++W TL++  ++  ++        ++ +    D+G
Sbjct: 715 DLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLGRFVENKIREGN-YDSG 773

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           SF  +SN+ A  G  +E A++R TM    ++KE G S +
Sbjct: 774 SFATLSNILANSGDWEEVARIRKTMKG--VNKEPGWSMV 810



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 243/506 (48%), Gaps = 22/506 (4%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + V+    K G   + +    +++L AK  RL  A ++F      SA+ W + + G + +
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 138 GDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           G+     G+A +M+R       + N  T S  L AC+  E+   G  +H   ++   E +
Sbjct: 149 GEG----GLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYD 204

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VFVGTSL++MY   G    A   F  +  ++V      I  + +  E   A  +   ++ 
Sbjct: 205 VFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVR 264

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           +    N YT T+++  C +   V E  Q+HG+ +K  +  +  V  A+++ Y   G  E 
Sbjct: 265 NGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIEL 324

Query: 314 AERMFD---AISERNLISWTALISGYVRSGHG-GKAINGFLEFLDLGICCDSSCLATVID 369
           +E++F+    +S R++  W+A ISG   S H   +++         G+  +  C A+V  
Sbjct: 325 SEKVFEEAGTVSNRSI--WSAFISGV--SNHSLLRSVQLLRRMFHQGLRPNDKCYASVF- 379

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             S  +++E G QLH  AIK G++  + +G+AL  +Y++  +++ +  + +    +    
Sbjct: 380 --SSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVS 437

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A+++GF         +  + F    L G +PD V+ + +LS      CL++G+ +H +
Sbjct: 438 WTAMVAGFATH--GHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGH 495

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           +++  Y     + +  I+MY+KC  +  A +IF     +D V W++M+S YA +G G+ A
Sbjct: 496 TLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEA 554

Query: 550 LLLFEEMKREGFAPDDISILGVLQAC 575
           + LF+ M       D      +L  C
Sbjct: 555 ISLFQLMVAASIRIDSYICSSILSLC 580



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 223/468 (47%), Gaps = 18/468 (3%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           EQ++  A K G   N +V T ++ +   SG  R+A  VF         C N  +    + 
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           GE  +A  +F  ++    EPN +T++  +S C     +  G+ +HGL ++     ++ VG
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            ++V MY K G    A R F  +  RN++SWT  I+G+V+      A+    E +  G+ 
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +     +++  C+  S +    Q+HG  +K     D  +  AL+  Y   G ++ +  +
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 328

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL-----AGMEPDPVTFSRLLSL 473
              F    T    +I S F+  +++      +L S Q L      G+ P+   ++ + S 
Sbjct: 329 ---FEEAGTVSNRSIWSAFISGVSNHS----LLRSVQLLRRMFHQGLRPNDKCYASVFS- 380

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
             S   +  G  LH+ +IK G+   ++VG+AL TMY++C ++  ++++F+ + +RD VSW
Sbjct: 381 --SVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSW 438

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            AM++ +A HG    A L F  M  +GF PD +S+  +L AC        G  +     +
Sbjct: 439 TAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLR 498

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +YG    +    C + +  +   +  A  + +++P  +  ++W +++S
Sbjct: 499 VYGETTFIND--CFISMYSKCQGVQTARRIFDATPRKDQ-VMWSSMIS 543



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 151/313 (48%), Gaps = 12/313 (3%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+ + + N ++ C         +Q++  A K G+     V   +V +  K G   +A R+
Sbjct: 67  PSQFAYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSN 376
           F      + + W A +SG VR+G GG A+  F + +  G C  +S   +  +  C+    
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV-WGSCEPNSFTYSGALSACAAGEE 185

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L +G  +HG  ++     DV +GT+LV++YAK GD+ +A         +    +   ++G
Sbjct: 186 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAG 245

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGY 495
           F++   D+    M+L  +    G+  +  T + +L L+ +Q  +VR  S +H   +KT  
Sbjct: 246 FVQD--DEPVSAMLLLREMVRNGVAINKYTATSIL-LACAQMSMVREASQIHGMVLKTEM 302

Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFK---GISDRDIVSWNAMLSAYALHGLGKGALLL 552
             D +V  ALI+ Y   G I+ + ++F+    +S+R I  W+A +S  + H L +   LL
Sbjct: 303 YLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLRSVQLL 360

Query: 553 FEEMKREGFAPDD 565
              M  +G  P+D
Sbjct: 361 -RRMFHQGLRPND 372


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 198/635 (31%), Positives = 319/635 (50%), Gaps = 74/635 (11%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFR--GLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           E +    T+++S Y  SG    A +VF    ++ +D    N MI  ++   +   A ++F
Sbjct: 77  EPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLF 136

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ---LHGLAVKFGVVREISVGNAIVTMY 305
             +    F+P+D+T+ +V++     L V++ KQ    H  A+K G     SV NA+V++Y
Sbjct: 137 CKMKHEGFKPDDFTYASVLAGL--ALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVY 194

Query: 306 GKHGMS----EEAERMFDAISERNLISWTALISGYVRSGH---GGKAINGFLEFLDL--- 355
            +   S      A ++FD I E++  SWT +++GYV++G    G + + G  E + L   
Sbjct: 195 SRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAY 254

Query: 356 --------------------------GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
                                     GI  D     +VI  C+    L+LG Q+H + ++
Sbjct: 255 NAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLR 314

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME-------KIA 442
               S      +LV +Y K G    AR + +    K    +NA+LSG++        K+ 
Sbjct: 315 REDFS-FHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373

Query: 443 DDE----------------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
             E                      E+ + LFS  +  G EP    FS  +   A     
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
             G+  HA  +K G+ + +  GNALITMYAKCG ++ A Q+F+ +   D VSWNA+++A 
Sbjct: 434 CNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAAL 493

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
             HG G  A+ ++EEM ++G  PD I+ L VL AC ++GL + G   FN +E +Y + P 
Sbjct: 494 GQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPG 553

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
            +H+A ++DLL R+G+ SEA ++I S PF  +  +W  L+S  ++  N +  I+A+ +L 
Sbjct: 554 ADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF 613

Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
            L P+  G+++L+SNMYA  G  +E A+VR  M D  + KE  CSWIE+++++H F+   
Sbjct: 614 GLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD 673

Query: 721 KDHPESEEIYSKLDLLNDEM-KLKVKDSSAFELQD 754
             HPE+E +Y  L  L  EM +L     ++F L D
Sbjct: 674 TSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHD 708



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 244/582 (41%), Gaps = 122/582 (20%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+L +AVH  ++  G Q      N LI++Y K + LD A++LFD +     I  T+++ G
Sbjct: 30  LQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSG 89

Query: 134 YLDDGDYE---------------------------------SVLGIACDMYRSEEKFNEH 160
           Y   GD                                   S + + C M     K ++ 
Sbjct: 90  YCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDF 149

Query: 161 TCSVILEACSLL-EDRIFGEQIHAFAIKSGFENNVFVGTSLISMY---------FHS--- 207
           T + +L   +L+ +D     Q HA A+KSG      V  +L+S+Y          HS   
Sbjct: 150 TYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARK 209

Query: 208 -----------------------GCFREAENVFRGLAYKDVRCV--NFMILEYNKAGESE 242
                                  GCF   + + +G+  ++++ V  N MI  Y   G  +
Sbjct: 210 VFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMD-ENMKLVAYNAMISGYVNCGLYQ 268

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE---ISVGN 299
            A  +   ++SS  E +++T+ +VI  C     ++ GKQ+H   ++    RE       N
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLR----REDFSFHFDN 324

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI------------- 346
           ++VT+Y K G   EA  +F+ +  ++L+SW AL+SGYV SGH G+A              
Sbjct: 325 SLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384

Query: 347 ----------NGF-LEFLDLGIC--------CDSSCLATVIDGCSVCSNLELGLQLHGFA 387
                     NGF  E L L  C        CD +  +  I  C+V      G Q H   
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA-FSGAIKSCAVLGAYCNGQQFHAQL 443

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           +K G+ S +  G AL+ +YAK G ++ A+ +     C  +  +NA+++   +     E  
Sbjct: 444 VKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVE-- 501

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY----AADVIVGN 503
            + ++ +    G+ PD +TF  +L+  +    + +GR  +  S++T Y     AD     
Sbjct: 502 AVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRK-YFNSMETVYRIPPGADHYA-- 558

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG 544
            LI +  + G    A  I + +  +     W A+LS   +HG
Sbjct: 559 RLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHG 600



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 116/519 (22%), Positives = 210/519 (40%), Gaps = 111/519 (21%)

Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE--------------- 323
            + +HG  + FG      + N ++ +Y K    + A ++FD ISE               
Sbjct: 33  ARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCA 92

Query: 324 ------------------RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
                             R+ + + A+I+G+  +  G  AIN F +    G   D    A
Sbjct: 93  SGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYA 152

Query: 366 TVIDGCS-VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD----LKSARMLLD 420
           +V+ G + V  + +  +Q H  A+K G      +  ALV +Y++       L SAR + D
Sbjct: 153 SVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFD 212

Query: 421 GFSCKYTAEFNAILSGFMEK----------IADDEEDVMVLFS------------QQRL- 457
               K    +  +++G+++              DE   +V ++            Q+ L 
Sbjct: 213 DIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALE 272

Query: 458 -------AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT---GYAADVIVGNALIT 507
                  +G+E D  T+  ++   A+   L  G+ +HAY ++     +  D    N+L+T
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFD----NSLVT 328

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY--------------------------- 540
           +Y KCG  + A  IF+ +  +D+VSWNA+LS Y                           
Sbjct: 329 LYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388

Query: 541 ----ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
               A +G G+  L LF  MKREGF P D +  G +++C   G    G     ++ +I G
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKI-G 447

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
               L     ++ +  + G + EA  +  + P  +S + W  L++      +   ++   
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDS-VSWNALIAALGQHGHGVEAVDVY 506

Query: 657 KRLLD--LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           + +L   + P D  +F+ V    +  G++D+  K   +M
Sbjct: 507 EEMLKKGIRP-DRITFLTVLTACSHAGLVDQGRKYFNSM 544



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 138/308 (44%), Gaps = 34/308 (11%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++    +  L+LG+ VHA++L+    +  F+ N+L+ LY K  + + A+ +F+ M 
Sbjct: 289 YPSVIRACANARLLQLGKQVHAYVLRREDFSFHFD-NSLVTLYYKCGKFNEARAIFEKMP 347

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRS------------------EEKFNEHTC 162
            +  ++W +L+ GY+  G       I  +M                     EE     +C
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407

Query: 163 -------------SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
                        S  +++C++L     G+Q HA  +K GF++++  G +LI+MY   G 
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGV 467

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             EA+ VFR +   D    N +I    + G    A  V+  +L     P+  TF  V++ 
Sbjct: 468 VEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTA 527

Query: 270 CYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLIS 328
           C     V++G++  + +   + +         ++ +  + G   EAE + +++  +    
Sbjct: 528 CSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAE 587

Query: 329 -WTALISG 335
            W AL+SG
Sbjct: 588 IWEALLSG 595



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 42/155 (27%)

Query: 460 MEPDPVTFSRL---------LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           M+P+P     +         L L   +  L   R++H   I  G+     + N LI +Y 
Sbjct: 1   MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYC 60

Query: 511 KCGSIDGAFQIFKGISD---------------------------------RDIVSWNAML 537
           K   +D A Q+F  IS+                                 RD V +NAM+
Sbjct: 61  KSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMI 120

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           + ++ +  G  A+ LF +MK EGF PDD +   VL
Sbjct: 121 TGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVL 155


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 190/655 (29%), Positives = 337/655 (51%), Gaps = 36/655 (5%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D    N  I+ + +    D A ++F+ M  RS++++ ++I GYL +  +     +A D++
Sbjct: 45  DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFS----LARDLF 100

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
               + +  + +V+L     + +R  GE    F +    + +V    +++S Y  +G   
Sbjct: 101 DKMPERDLFSWNVMLTG--YVRNRRLGEAHKLFDLMP--KKDVVSWNAMLSGYAQNGFVD 156

Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF-----VHLLSSDFEPNDYTFTNV 266
           EA  VF  + +++    N ++  Y   G  + A  +F       L+S +     Y   N+
Sbjct: 157 EAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNM 216

Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           +          + +QL         VR++   N +++ Y + G   +A+R+F+    R++
Sbjct: 217 LG---------DARQLFDRMP----VRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDV 263

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
            +WTA++SGYV++G   +A   F E         ++ LA  +    +    EL   +   
Sbjct: 264 FTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMP-- 321

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
                   ++     ++  Y + G +  AR L D    +    + AI+SG+ +      E
Sbjct: 322 ------CRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQN--GHYE 373

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
           + + +F + +  G   +  TFS  LS  A  A L  G+ +H   +K G+     VGNAL+
Sbjct: 374 EALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALL 433

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MY KCGS D A  +F+GI ++D+VSWN M++ YA HG G+ AL+LFE MK+ G  PD+I
Sbjct: 434 GMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEI 493

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           +++GVL AC +SGL + G   F  +++ Y ++P  +H+ CM+DLLGRAGRL EA NL+ +
Sbjct: 494 TMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRN 553

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            PF      W  L+  S++  N++    A++ +  +EP+++G ++L+SN+YA  G   + 
Sbjct: 554 MPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDV 613

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            K+R+ M +  + K  G SW+E+ +K+H F      HPE + IY+ L+ L+ +M+
Sbjct: 614 GKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMR 668



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 143/581 (24%), Positives = 257/581 (44%), Gaps = 70/581 (12%)

Query: 25  KKVPINTFSPNP-----KSQVAYLCSISSV----SCSERTLLFNDWPQLVKISIG---SG 72
           K+   N++SP+         V +  +ISS      C     +FN  P+   +S     SG
Sbjct: 27  KRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISG 86

Query: 73  DLKLGQ-AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            L+  + ++   L     + D F  N ++  Y +  RL  A KLFD M  +  ++W +++
Sbjct: 87  YLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAML 146

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNE--HTCSVILEA--CSLLEDRIFGEQIHAFAIK 187
            GY  +G  +           + E FN+  H  S+       + + +    E    F  +
Sbjct: 147 SGYAQNGFVDE----------AREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQ 196

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
           S +E  +     L+  Y       +A  +F  +  +DV   N MI  Y + G+   A  +
Sbjct: 197 SNWE--LISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRL 254

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGV--------------- 291
           F      D     +T+T ++S   +N  V+E ++    + VK  +               
Sbjct: 255 FNESPIRDV----FTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKM 310

Query: 292 -----------VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
                       R IS  N ++T YG++G   +A ++FD + +R+ +SW A+ISGY ++G
Sbjct: 311 VIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNG 370

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
           H  +A+N F+E    G   + S  +  +  C+  + LELG Q+HG  +K G+ +   +G 
Sbjct: 371 HYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGN 430

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           AL+ +Y K G    A  + +G   K    +N +++G+       +   +VLF   + AG+
Sbjct: 431 ALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQ--ALVLFESMKKAGV 488

Query: 461 EPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGA 518
           +PD +T   +LS  +    + RG + + YS+   Y       +   +I +  + G ++ A
Sbjct: 489 KPDEITMVGVLSACSHSGLIDRG-TEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEA 547

Query: 519 FQIFKGIS-DRDIVSWNAMLSAYALHG---LG-KGALLLFE 554
             + + +  D    SW A+L A  +HG   LG K A ++F+
Sbjct: 548 ENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFK 588


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 177/575 (30%), Positives = 297/575 (51%), Gaps = 25/575 (4%)

Query: 194 VFVGTSLISMYFHSGCFRE------------------AENVFRGLAYKDVRCVNFMILEY 235
           VF+   L++ Y   G FRE                  A  +F  L  +DV   N MI  Y
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGY 226

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
              G SE    +F  +L      +  T  +V++ C     +  G+ LHG A+K    +E+
Sbjct: 227 VSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKEL 286

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           ++ N ++ MY K G    A ++F+ + ER+++SWT++I+GY R G    ++  F E    
Sbjct: 287 TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 346

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           GI  D   + T++  C+    LE G  +H +  ++   SD+ +  AL+D+YAK G +  A
Sbjct: 347 GISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDA 406

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             +      K    +N ++ G+ +    +E   + LF + +    +P+ +T + +L   A
Sbjct: 407 HSVFSEMQVKDIVSWNTMIGGYSKNSLPNE--ALNLFVEMQYNS-KPNSITMACILPACA 463

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S A L RG+ +H + ++ G++ D  V NAL+ MY KCG++  A  +F  I ++D+VSW  
Sbjct: 464 SLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTV 523

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++ Y +HG G  A+  F EM+  G  PD++S + +L AC +SGL + G   FN +    
Sbjct: 524 MIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNC 583

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            + P  EH+AC+VDLL RAG LS+A   I   P      +W  L+   ++  + K +   
Sbjct: 584 CIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKV 643

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           ++ + +LEP++ G ++L++N+YA     +E  K+R  +    L K  GCSWIEI  K+H 
Sbjct: 644 AEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHI 703

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAF 750
           FV     HP    + +K++LL  + + ++K+   F
Sbjct: 704 FVTGDSSHP----LANKIELLLKKTRTRMKEEGHF 734



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 231/501 (46%), Gaps = 39/501 (7%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF---------------- 106
           +LV + +  GDL+ G+ +        +    F  N L+N YAK                 
Sbjct: 141 KLVFMYVTCGDLREGRRI----FDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMREL 196

Query: 107 --NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
              R++ A+KLFD +  R  I+W S+I GY+ +G  E  L +   M       +  T   
Sbjct: 197 GIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVS 256

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           ++  CS     + G  +H +AIK+ F   + +   L+ MY  SG    A  VF  +  + 
Sbjct: 257 VVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERS 316

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V     MI  Y + G S+M+  +F  +      P+ +T T ++  C     +E GK +H 
Sbjct: 317 VVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHN 376

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
              +  +  ++ V NA++ MY K G   +A  +F  +  ++++SW  +I GY ++    +
Sbjct: 377 YIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNE 436

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+N F+E +      +S  +A ++  C+  + LE G ++HG  +++G+  D  +  ALVD
Sbjct: 437 ALNLFVE-MQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVD 495

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +Y K G L  AR+L D    K    +  +++G+   +     + +  F++ R +G+EPD 
Sbjct: 496 MYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY--GMHGYGSEAIAAFNEMRNSGIEPDE 553

Query: 465 VTFSRLLSLSASQACLVRG-------RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           V+F  +L   +    L  G       R+      K+ + A       ++ + A+ G++  
Sbjct: 554 VSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYA------CIVDLLARAGNLSK 607

Query: 518 AFQIFKGIS-DRDIVSWNAML 537
           A++  K +  + D   W A+L
Sbjct: 608 AYKFIKMMPIEPDATIWGALL 628



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 228/516 (44%), Gaps = 73/516 (14%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N  I  + + G    A  +       D E    T+ +V+ +C +   +++G+++H +   
Sbjct: 72  NIEICRFCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQS 129

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI--------------- 333
             V  +  +G+ +V MY   G   E  R+FD ++   +  W  L+               
Sbjct: 130 NDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSL 189

Query: 334 ----------------------------------SGYVRSGHGGKAINGFLEFLDLGICC 359
                                             SGYV +G   K ++ F + L LGI  
Sbjct: 190 FKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINT 249

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D + + +V+ GCS    L LG  LHG+AIK  +  ++ L   L+D+Y+K G+L SA  + 
Sbjct: 250 DLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVF 309

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           +    +    + ++++G+  +   D    + LF +    G+ PD  T + +L   A    
Sbjct: 310 ETMGERSVVSWTSMIAGYAREGLSDMS--VRLFHEMEKEGISPDIFTITTILHACACTGL 367

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  G+ +H Y  +    +D+ V NAL+ MYAKCGS+  A  +F  +  +DIVSWN M+  
Sbjct: 368 LENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGG 427

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG--L 597
           Y+ + L   AL LF EM+     P+ I++  +L AC      E G       ++I+G  L
Sbjct: 428 YSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERG-------QEIHGHIL 479

Query: 598 R---PILEHFA-CMVDLLGRAGRLSEAMNLINSSPFSESPLL-WRTLVSVSKLMANSKFS 652
           R    +  H A  +VD+  + G L  A  L +  P  E  L+ W  +++   +      +
Sbjct: 480 RNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP--EKDLVSWTVMIAGYGMHGYGSEA 537

Query: 653 ILASKRLLD--LEPKDAGSFILVSNMYAGQGMLDEA 686
           I A   + +  +EP D  SFI +    +  G+LDE 
Sbjct: 538 IAAFNEMRNSGIEP-DEVSFISILYACSHSGLLDEG 572


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 178/596 (29%), Positives = 312/596 (52%), Gaps = 33/596 (5%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISM--YFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           +QIH+  I +G  +N  V   +I+       G    A  VF  +   +    N MI  Y+
Sbjct: 36  KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           + G    A  ++  +L     P++YT+  ++     +  V+ G++LH   VK G    + 
Sbjct: 96  RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVF 155

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V NA++ +Y   G    A  +FD  S+ ++++W  +ISGY RS    +++  F E   + 
Sbjct: 156 VQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMR 215

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSA 415
           +   S  L +V+  CS   +L +G ++H + +K   +  VR L  AL+D+YA  GD+ +A
Sbjct: 216 VLPSSITLVSVLSACSKLKDLNVGKRVHRY-VKDLKIEPVRVLENALIDMYAACGDMDTA 274

Query: 416 RMLLDGFSCKYTAEFNAILSGF------------MEKIADDE-----------------E 446
             + D    +    + AI++GF             +K+ + +                 +
Sbjct: 275 LGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK 334

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
           +V+ LF + + A ++PD  T   +L+  A    L  G  + AY  K     D  VGNALI
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            MY  CG+++ A +IF  +  RD +SW A++   A++G G+ AL +F +M +    PD++
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEV 454

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           + +GVL AC +SG+ + G   F  +   +G+ P + H+ CMVDLLGRAG L EA  +I +
Sbjct: 455 TCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKN 514

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            P   + ++W +L+   ++  + + + +A++++L+LEP++   ++L+ N+YA     ++ 
Sbjct: 515 MPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKL 574

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
            +VR  M D  + K  GCS IE++  +H FVA  + HP+S+EIYSKLD ++ ++K 
Sbjct: 575 HEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKF 630



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 230/535 (42%), Gaps = 39/535 (7%)

Query: 46  ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQ--AVHAFLLKSGSQNDTFEANNLINLY 103
           IS+ + S         PQ   +S+      + Q   +H+  + +G  ++      +I   
Sbjct: 2   ISATTLSPPPTHLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFC 61

Query: 104 AK--FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
            K     ++ A+ +FD M   +   W ++IKGY   G   S + + C+M       +E+T
Sbjct: 62  CKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYT 121

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
              +L+  +       G ++H   +K GF +NVFV  +LI +Y  SG    A  VF   +
Sbjct: 122 YPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSS 181

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
             DV   N MI  YN++ + + +  +F  +      P+  T  +V+S C +   +  GK+
Sbjct: 182 KGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKR 241

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +H       +     + NA++ MY   G  + A  +FD +  R++ISWTA+++G+   G 
Sbjct: 242 VHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQ 301

Query: 342 GGKA------------------------INGFLEFLDL-------GICCDSSCLATVIDG 370
            G A                        +N F E L L        I  D   + +++  
Sbjct: 302 VGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTA 361

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+    LELG  +  +  K+    D  +G AL+D+Y   G+++ A  + +    +    +
Sbjct: 362 CAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISW 421

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA-Y 489
            A++ G    I    E+ + +FSQ   A + PD VT   +L        + +G+   A  
Sbjct: 422 TAVIFGL--AINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARM 479

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH 543
           + + G   +V     ++ +  + G +  A ++ K +  + + + W ++L A  +H
Sbjct: 480 TTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVH 534



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 206/465 (44%), Gaps = 48/465 (10%)

Query: 36  PKSQVAYLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDT 93
           P S V+  C +      ER ++ +++  P L+K       +K G+ +H  ++K G  ++ 
Sbjct: 100 PNSAVSMYCEML-----ERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNV 154

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
           F  N LI+LY+    + VA+ +FD       +TW  +I GY     ++  + +  +M R 
Sbjct: 155 FVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERM 214

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
               +  T   +L ACS L+D   G+++H +      E    +  +LI MY   G    A
Sbjct: 215 RVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTA 274

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF----------------- 256
             +F  +  +DV     ++  +   G+  +A + F  +   DF                 
Sbjct: 275 LGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK 334

Query: 257 --------------EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
                         +P+++T  ++++ C     +E G+ +     K  +  +  VGNA++
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY   G  E+A R+F+A+  R+ ISWTA+I G   +G+G +A++ F + L   I  D  
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEV 454

Query: 363 CLATVIDGCSVCSNLELGLQLHG-FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
               V+  C+    ++ G +       +HG   +V     +VD+  + G LK A  ++  
Sbjct: 455 TCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKN 514

Query: 422 FSCKYTAEFNAILSGFME---KIADDEEDVMVLFSQQRLAGMEPD 463
              K     N+I+ G +    ++  DEE  M   + Q++  +EP+
Sbjct: 515 MPVKP----NSIVWGSLLGACRVHRDEE--MAEMAAQQILELEPE 553


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 185/648 (28%), Positives = 331/648 (51%), Gaps = 5/648 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL  G  +HA++ ++G + +    N LI++Y++   L  A+++FD +   +  TW ++I 
Sbjct: 317 DLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIA 376

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY  +G  E    +   M +   + ++ T + +L  C+   D   G+++H+    +G++ 
Sbjct: 377 GY-GEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQT 435

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           ++ V T+LISMY   G   EA  VF  +  ++V   N  I    +    + AF  F  + 
Sbjct: 436 DLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMR 495

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
             D  P+  TF  +++ C     +E G+ +HG   ++G++    V NA+++MYG+ G   
Sbjct: 496 RDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLA 555

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A  +F  I  R+L SW A+I+  V+ G  G A + F ++   G   D      V+   +
Sbjct: 556 DAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVA 615

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +L+ G  +HG   K G+  D+R+ T L+ +Y+K G L+ A  +      K    +NA
Sbjct: 616 NLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNA 675

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +L+ +    +D  +D + LF Q +L G+ PD  T+S  L+  A    +  G+ +HA   +
Sbjct: 676 MLAAYAH--SDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKE 733

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G   D  V N+LI MY++CG +  A Q+F+ +  RDI SWNA+++ Y  +G G  AL  
Sbjct: 734 AGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEY 793

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           +E M R    P+  +   +L +    G  E        I++ + + P  +H+A MV  LG
Sbjct: 794 YELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALG 853

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI- 671
           RAG L EA   I       + L+W +L+   ++  N + +  A + LLD + + + +   
Sbjct: 854 RAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPAVCE 913

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
            + ++YA  G  ++ + ++TTM +  L     C+ IE++S+ H+F+A+
Sbjct: 914 QLMSIYAAAGRWEDVSVLKTTMQEAGLVALKSCT-IEVNSEFHNFIAN 960



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 287/547 (52%), Gaps = 4/547 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +H+ + K+G ++D   +  LIN+Y K   L++A+K+F+ M  R+ ++WT++I G
Sbjct: 217 LEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISG 276

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+  GD    L +   + RS  + N+ + + IL AC+   D   G ++HA+  ++G E  
Sbjct: 277 YVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQE 336

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V VG +LISMY   G    A  VF  L   +    N MI  Y + G  E AF +F  +  
Sbjct: 337 VLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQ 395

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
             F+P+ +T+ +++++C +   ++ GK+LH      G   +++V  A+++MY K G  EE
Sbjct: 396 KGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEE 455

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A ++F+ + ERN+ISW A IS   R   G +A   F +     +  D     T+++ C+ 
Sbjct: 456 ARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTS 515

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +LE G  +HG   + G LS+  +  AL+ +Y + G+L  AR +      +    +NA+
Sbjct: 516 PEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAM 575

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           ++  ++  A+       LF + R  G + D  TF  +L   A+   L  GR +H    K 
Sbjct: 576 IAANVQHGANG--SAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKG 633

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
           G+  D+ V   LI MY+KCGS+  A  +F  + ++D+V WNAML+AYA    G+ AL LF
Sbjct: 634 GFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLF 693

Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
           ++M+ EG  PD  +    L AC      E G  +  ++++  G+         ++++  R
Sbjct: 694 QQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEA-GMETDTRVSNSLIEMYSR 752

Query: 614 AGRLSEA 620
            G L  A
Sbjct: 753 CGCLCSA 759



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 147/455 (32%), Positives = 251/455 (55%), Gaps = 4/455 (0%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L+ C L +    G+++H     + F+ ++++   LISMY   G   +A NVF+ +  KDV
Sbjct: 107 LQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDV 166

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
              N MI  Y   G  + A  +F  +     +PN  TF +++S C   + +E G+Q+H  
Sbjct: 167 VSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSR 226

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
             K G   +++V  A++ MY K G  E A ++F+ + ERN++SWTA+ISGYV+ G   +A
Sbjct: 227 IAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREA 286

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +  F + +  GI  +    A+++  C+  ++L  GL+LH +  + G   +V +G AL+ +
Sbjct: 287 LALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISM 346

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           Y++ G L +AR + D         +NA+++G+ E +    E+   LF      G +PD  
Sbjct: 347 YSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGLM---EEAFRLFRAMEQKGFQPDKF 403

Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           T++ LL++ A +A L RG+ LH+    TG+  D+ V  ALI+MYAKCGS + A ++F  +
Sbjct: 404 TYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQM 463

Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGI 585
            +R+++SWNA +S    H LGK A   F++M+R+   PD I+ + +L +C      E G 
Sbjct: 464 PERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGR 523

Query: 586 CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            +  +I Q +G+         ++ + GR G L++A
Sbjct: 524 YIHGKINQ-WGMLSNNHVANALISMYGRCGNLADA 557



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 165/571 (28%), Positives = 283/571 (49%), Gaps = 8/571 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
            N + + ++  + +  L  G+ VH  +  +  + D +  N LI++Y+K   ++ A  +F 
Sbjct: 100 LNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQ 159

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  +  ++W ++I GY   G  +    +   M R   K N++T   IL AC       F
Sbjct: 160 AMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEF 219

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           GEQIH+   K+G+E++V V T+LI+MY   G    A  VF  +  ++V     MI  Y +
Sbjct: 220 GEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQ 279

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G+S  A  +F  L+ S  +PN  +F +++  C     + EG +LH    + G+ +E+ V
Sbjct: 280 HGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLV 339

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG--GKAINGFLEFLDL 355
           GNA+++MY + G    A ++FD +   N  +W A+I+GY   G G   +A   F      
Sbjct: 340 GNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGY---GEGLMEEAFRLFRAMEQK 396

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G   D    A+++  C+  ++L+ G +LH      G+ +D+ + TAL+ +YAK G  + A
Sbjct: 397 GFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEA 456

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R + +    +    +NA +S       D  ++    F Q R   + PD +TF  LL+   
Sbjct: 457 RKVFNQMPERNVISWNAFISCCCRH--DLGKEAFQAFKQMRRDDVNPDHITFITLLNSCT 514

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S   L RGR +H    + G  ++  V NALI+MY +CG++  A ++F  I  RD+ SWNA
Sbjct: 515 SPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNA 574

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           M++A   HG    A  LF + + EG   D  + + VL+A       + G  +   +E+  
Sbjct: 575 MIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEK-G 633

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           G    +     ++ +  + G L +A N+ ++
Sbjct: 634 GFGKDIRVLTTLIKMYSKCGSLRDAENVFST 664



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 204/413 (49%), Gaps = 4/413 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  L+ I     DL  G+ +H+ +  +G Q D   A  LI++YAK    + A+K+F+ M 
Sbjct: 405 YASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMP 464

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ I+W + I         +        M R +   +  T   +L +C+  ED   G  
Sbjct: 465 ERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRY 524

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH    + G  +N  V  +LISMY   G   +A  VF  +  +D+   N MI    + G 
Sbjct: 525 IHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGA 584

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           +  AF +F    S   + + YTF NV+        ++ G+ +HGL  K G  ++I V   
Sbjct: 585 NGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTT 644

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           ++ MY K G   +AE +F  + E++++ W A+++ Y  S  G  A+  F +    G+  D
Sbjct: 645 LIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPD 704

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           SS  +T ++ C+  + +E G ++H    + G  +D R+  +L+++Y++ G L SA+ + +
Sbjct: 705 SSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFE 764

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL-AGMEPDPVTFSRLLS 472
               +    +NA+++G+ +   + + ++ + + +  L A + P+  TF+ +LS
Sbjct: 765 KMLSRDINSWNALIAGYCQ---NGQGNIALEYYELMLRASIVPNKATFTSILS 814


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 279/473 (58%), Gaps = 3/473 (0%)

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           + +   I+ C E   + EG+Q+H   +       + +G  +VTMY + G  ++A  + D 
Sbjct: 11  HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + ER+++SWT +ISGY ++    +A++ F++ L  G   +   LATV+  CS   ++  G
Sbjct: 71  MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q+H   +K  + S + +G++L+D+YAK  +++ AR + D    +      AI+SG+ +K
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 190

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
             D+E   + LF Q    GM+ + VTF+ L++  +  A L  G+ +HA  ++      V 
Sbjct: 191 GLDEE--ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 248

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           + N+LI MY+KCG +  + ++F  + +R +VSWNAML  Y  HGLG   + LF+++ +E 
Sbjct: 249 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE- 307

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             PD +++L VL  C + GL + G+ +F+ + +         H+ C++DLLGR+GRL +A
Sbjct: 308 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 367

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
           +NLI + PF  +P +W +L+   ++ AN     L +++LL++EP++AG+++++SN+YA  
Sbjct: 368 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAA 427

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           GM  +  KVR  M +  ++KE G SWI +D  +H F +S + HP  ++I +K+
Sbjct: 428 GMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKI 480



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 203/408 (49%), Gaps = 7/408 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F+++   +   I    L  G+ VHA ++ +  +   F    L+ +Y +   LD A+ + D
Sbjct: 10  FHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLD 69

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  RS ++WT++I GY     +   L +   M R+    NE+T + +L +CS  +    
Sbjct: 70  RMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQ 129

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+H+  +K+ FE+++FVG+SL+ MY  S   +EA  VF  L  +DV     +I  Y +
Sbjct: 130 GKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQ 189

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  +F  L S   + N  TFT +++       ++ GKQ+H L ++  +   +++
Sbjct: 190 KGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVAL 249

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N+++ MY K G    + R+FD + ER+++SW A++ GY R G G + I+ F + L   +
Sbjct: 250 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEV 308

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGGDLKSA 415
             DS  L  V+ GCS    ++ GL +    +K     L     G  ++D+  + G L+ A
Sbjct: 309 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG-CIIDLLGRSGRLEKA 367

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
             L++    + T      L G     A+     +V    Q+L  MEP+
Sbjct: 368 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELV---AQKLLEMEPE 412


>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 591

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 167/490 (34%), Positives = 269/490 (54%), Gaps = 8/490 (1%)

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR-EISVGNAIVTMYGKHG 309
           +L    EP+ +T   V+       G+ EG+Q+H  ++K G+V   + V N ++ +Y   G
Sbjct: 101 MLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCG 160

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              + +++FD    R+L+SWT LI  + ++G   +A+  F+E  DL +  D   L  V+ 
Sbjct: 161 SIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLS 220

Query: 370 GCSVCSNLELGLQLHGFAIKHGYL---SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
            CS   +L LG ++H + I+H Y+   +DV +G AL+D+Y K  DL SA  + D    K 
Sbjct: 221 ACSNLGDLNLGQKVHSY-IRH-YIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKN 278

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +NA++SG   +      + +  F   +  G++PD VT   +L+  A+   L  G+ +
Sbjct: 279 VVTWNAMISGLAYQ--GRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWV 336

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           HAY  +    AD  VGNAL+ MYAKCGSID AF++F+ +  RD+ S+ AM+   ALHG  
Sbjct: 337 HAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEA 396

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             A  +F EM R G  P++++ LG+L AC + GL   G   F ++   Y LRP  EH+ C
Sbjct: 397 NWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGC 456

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           M+DLLGRAG + EA  +I+             L+   ++  N        ++L +L+P +
Sbjct: 457 MIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDE 516

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPES 726
            G++IL++N+Y+      +A K+R TM + ++ K  GCS IE+D  +H F    K HP S
Sbjct: 517 EGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRS 576

Query: 727 EEIYSKLDLL 736
           + I + ++L+
Sbjct: 577 KVIIANINLI 586



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 191/390 (48%), Gaps = 10/390 (2%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRG 219
           T  ++L+A +L++    G+QIHA +IK+G    NV+V  +L+ +Y   G   + + VF  
Sbjct: 112 TIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDE 171

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEE 278
             ++D+     +I  + KAG    A   F+ +       +  T   V+S C  NLG +  
Sbjct: 172 CPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSAC-SNLGDLNL 230

Query: 279 GKQLHGLAVKFGVVR-EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           G+++H     +  ++ ++ VGNA++ MY K      A ++FD +  +N+++W A+ISG  
Sbjct: 231 GQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLA 290

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
             G   +A++ F    D G+  D   L  V++ C+    LE+G  +H +  ++  L+D  
Sbjct: 291 YQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKF 350

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +G AL+D+YAK G +  A  + +    +    + A++ G    +  +      +FS+   
Sbjct: 351 VGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGL--ALHGEANWAFQVFSEMFR 408

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSI 515
            G+EP+ VTF  LL ++ S   LV     + + +   Y       +   +I +  + G +
Sbjct: 409 VGIEPNEVTFLGLL-MACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLV 467

Query: 516 DGAFQIFKGISDR-DIVSWNAMLSAYALHG 544
             A +I   +  R D+ +  A+L A  +HG
Sbjct: 468 KEAEEIIHKMEIRPDVFACGALLGACRIHG 497



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 4/302 (1%)

Query: 74  LKLGQAVHAFLLKSGSQN-DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           ++ GQ +HA  +K+G    + + +N L+ LY+    +   QK+FD    R  ++WT+LI+
Sbjct: 126 IREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQ 185

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS-GFE 191
            +   G Y   +    +M     + +  T  V+L ACS L D   G+++H++       +
Sbjct: 186 AFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMK 245

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +VFVG +L+ MY        A  VF  +  K+V   N MI      G    A   F  +
Sbjct: 246 ADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMM 305

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
                +P++ T   V++ C  NLGV E GK +H    +  ++ +  VGNA++ MY K G 
Sbjct: 306 QDKGVKPDEVTLVGVLNSC-ANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGS 364

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            +EA R+F+++  R++ S+TA+I G    G    A   F E   +GI  +      ++  
Sbjct: 365 IDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMA 424

Query: 371 CS 372
           CS
Sbjct: 425 CS 426



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 2/255 (0%)

Query: 72  GDLKLGQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           GDL LGQ VH+++      + D F  N L+++Y K + L+ A K+FD M V++ +TW ++
Sbjct: 226 GDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAM 285

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G    G Y   L     M     K +E T   +L +C+ L     G+ +HA+  ++  
Sbjct: 286 ISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHI 345

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             + FVG +L+ MY   G   EA  VF  +  +DV     MI      GE+  AF VF  
Sbjct: 346 LADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSE 405

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHG 309
           +     EPN+ TF  ++  C     V EGK+    ++ K+ +  +      ++ + G+ G
Sbjct: 406 MFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAG 465

Query: 310 MSEEAERMFDAISER 324
           + +EAE +   +  R
Sbjct: 466 LVKEAEEIIHKMEIR 480



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 13/281 (4%)

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG---DLKSARMLLDGFSC 424
           ++ C   S+L+   Q+HG AIK   LS   L   L+ + +      DL   R +L   + 
Sbjct: 13  LNSCKSISHLK---QIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSIL--LTH 67

Query: 425 KYTAEFN-AILSGFMEKIADDEEDV--MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            + A+F  ++ +  +  I+ +  ++  M   ++  + G+EPD  T   +L   A    + 
Sbjct: 68  SHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIR 127

Query: 482 RGRSLHAYSIKTGYAA-DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            G+ +HA SIKTG    +V V N L+ +Y+ CGSI    ++F     RD+VSW  ++ A+
Sbjct: 128 EGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAF 187

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
              GL   A+  F EM       D  +++ VL AC   G    G  + + I     ++  
Sbjct: 188 TKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKAD 247

Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           +     ++D+  +   L+ A  + +  P  ++ + W  ++S
Sbjct: 248 VFVGNALLDMYLKCDDLNSAYKVFDEMPV-KNVVTWNAMIS 287


>gi|357153657|ref|XP_003576524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Brachypodium distachyon]
          Length = 809

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 189/637 (29%), Positives = 332/637 (52%), Gaps = 12/637 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            +L +G+AVH  +L+   + D F   +++N+YAK   +  A + F  M +R+ ++WT+ I
Sbjct: 184 AELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAI 243

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G++ + +  S + +  +M RS    N++T + IL ACS +       Q+H   +K    
Sbjct: 244 AGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKELY 303

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +  V  +LI  Y + G    +E  F  +       +    +    +     +  + + +
Sbjct: 304 LDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSHSLPRSLQLLMRM 363

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
                 PND  + +V S       +E G+QLH L +K G V ++ VG+A+ TMY +    
Sbjct: 364 FRQGLRPNDRCYASVFS---SMDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDL 420

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E++ R+F  + ER+ +SWTA+++G+   GH  +A   F   +  G   D   L+ ++  C
Sbjct: 421 EDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSAC 480

Query: 372 SVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
                L  G  +HG  ++ HG ++ +     LV +Y+K  + ++AR + D   CK    F
Sbjct: 481 DKPECLLKGKTIHGHILRVHGEITSI--SHCLVSMYSKCQEAQTARRIFDATPCKDQVMF 538

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           ++++SG+       E   M LF      G + D    S +LSL A  A  + G+ LH ++
Sbjct: 539 SSMISGYSTNGCSAE--AMSLFQLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHA 596

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
           IK G  +D+ V ++L+ +Y+K G+++ + ++F  I+  D+V+W A++  YA HG G+ AL
Sbjct: 597 IKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDAL 656

Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            +F+ M   G  PD + ++ VL AC  +GL E G+  F  +  IYG+ P+L H+ CMVDL
Sbjct: 657 EMFDLMITLGVKPDTVVLVSVLSACSRNGLVEEGVNYFESMRTIYGVEPMLHHYCCMVDL 716

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGR+GRL +A + I S P     ++W TL +  ++  ++        ++ + +  D+GSF
Sbjct: 717 LGRSGRLQDAKSFIESMPMKADLMVWSTLFAACRVHNDAVLGGFVENKIRE-DGYDSGSF 775

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
             +SN+ A  G  +E A+VR +M+   + KE G S +
Sbjct: 776 ATLSNILANSGDWEEVARVRKSMD---VKKEPGWSMV 809



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 245/517 (47%), Gaps = 8/517 (1%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           D+ + +   +G G +   + V+    K G   D +  + +I+L AK  R + A K F+  
Sbjct: 71  DFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDALKAFEDG 130

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
              SA+ W ++I G + +      + +  DM R   + N  T S +L AC++  +   G 
Sbjct: 131 DRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGVLSACAMGAELCVGR 190

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            +H   ++   E +VFVGTS+++MY  SG    A   F  +  ++V      I  + +  
Sbjct: 191 AVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGFVQEE 250

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           E   A  +   ++ S    N YT T+++  C +   + E  Q+HG+ +K  +  + +V  
Sbjct: 251 EPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKELYLDHAVKE 310

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLIS-WTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           A++  Y   G  E +E  F+ +   +    W+  ISG V S    +++   +     G+ 
Sbjct: 311 ALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISG-VSSHSLPRSLQLLMRMFRQGLR 369

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +  C A+V    S   ++E G QLH   IK G++ DV +G+AL  +Y++G DL+ +  +
Sbjct: 370 PNDRCYASVF---SSMDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRV 426

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
                 +    + A+++GF         +   LF    L G +PD VT S +LS      
Sbjct: 427 FKEMQERDEVSWTAMVAGFASH--GHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPE 484

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
           CL++G+++H + ++  +     + + L++MY+KC     A +IF     +D V +++M+S
Sbjct: 485 CLLKGKTIHGHILRV-HGEITSISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFSSMIS 543

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            Y+ +G    A+ LF+ M   GF  D      +L  C
Sbjct: 544 GYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLC 580



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 150/312 (48%), Gaps = 10/312 (3%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+   F   ++ C     V   +Q++ +A K G+  +  V + ++ +  K G  E+A + 
Sbjct: 67  PSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDALKA 126

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           F+     + + W  +ISG VR+     AI+ F + +      +S   + V+  C++ + L
Sbjct: 127 FEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGVLSACAMGAEL 186

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
            +G  +HG  ++     DV +GT++V++YAK GD+ +A         +    +   ++GF
Sbjct: 187 CVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGF 246

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGYA 496
           +++  ++    + L  +   +G+  +  T + +L L+ SQ  ++R  S +H   +K    
Sbjct: 247 VQE--EEPVSAVRLLREMVRSGVSMNKYTATSIL-LACSQMYMIREVSQMHGMIMKKELY 303

Query: 497 ADVIVGNALITMYAKCGSI---DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
            D  V  ALI  YA  G+I   + AF+    +S   I  W+  +S  + H L + +L L 
Sbjct: 304 LDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRI--WSTFISGVSSHSLPR-SLQLL 360

Query: 554 EEMKREGFAPDD 565
             M R+G  P+D
Sbjct: 361 MRMFRQGLRPND 372



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 52/124 (41%)

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           F   R  G  P  + F + L+       +     ++  + K G   D  V + +I + AK
Sbjct: 57  FVLSRAVGNTPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMIDLLAK 116

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
            G  + A + F+       V WN ++S    +   + A+ +F +M R    P+  +  GV
Sbjct: 117 SGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGV 176

Query: 572 LQAC 575
           L AC
Sbjct: 177 LSAC 180


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 209/636 (32%), Positives = 314/636 (49%), Gaps = 81/636 (12%)

Query: 198 TSLISMYFHSGCFREAENVFRG--LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           T+LI+ Y   G       +F G  L  +D    N MI  Y   G+   A  +F  +   D
Sbjct: 83  TTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD 142

Query: 256 FEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGV-VREISVGNAIVTMYGKH----G 309
           F P+D+TFT+V+S     +G E+   Q+H   VK G+     SV NA++++Y K     G
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELG 202

Query: 310 MS----EEAERMFDAISERNLISWTALISGYVRSG--------------HGGKAING--- 348
           +S      A ++FD + +R+ ++WT +I+GYVR+               + G A N    
Sbjct: 203 ISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMIS 262

Query: 349 -------FLEFLD-------LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK----- 389
                  F E L        LGI  D     T+I  C+   + ++G Q+H + +K     
Sbjct: 263 GYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNP 322

Query: 390 -HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-----MEKIAD 443
            H +   V    AL+ +Y K   +  AR +      +    +NAILSG+     ME+   
Sbjct: 323 NHSFCLSV--SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKS 380

Query: 444 DEEDVMV------------------------LFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
             E++ V                        LF Q RL G EP    F+  L+  +    
Sbjct: 381 FFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGA 440

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  GR LHA  +  GY + + VGNA+I+MYAKCG ++ A  +F  +   D+VSWN+M++A
Sbjct: 441 LENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAA 500

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
              HG G  A+ LF++M +EG  PD I+ L VL AC ++GL E G   FN + + YG+ P
Sbjct: 501 LGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITP 560

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             +H+A MVDL  RAG  S A  +I+S P      +W  L++  ++  N    I A+++L
Sbjct: 561 CEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQL 620

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
             L P++ G+++L+SN+YA  G  +E AKVR  M D  + KE  CSWIE+++K+H F+  
Sbjct: 621 FKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVD 680

Query: 720 GKDHPESEEIYSKLDLLNDEM-KLKVKDSSAFELQD 754
              HPE   +Y  L+ L  EM KL     + F L D
Sbjct: 681 DDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHD 716



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 176/390 (45%), Gaps = 37/390 (9%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           L     + D      +I  Y + + L+ A+++F+ M+      W ++I GY+  G ++  
Sbjct: 214 LFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEA 273

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN----VFVGTS 199
           L +   M     +F++ T + I+ AC+ +     G+Q+HA+ +K+    N    + V  +
Sbjct: 274 LTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNA 333

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA--------------- 244
           LI++Y  +    EA  +F  +  +++   N ++  Y  AG  E A               
Sbjct: 334 LITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTL 393

Query: 245 ----------------FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
                             +F  +    FEP D+ F   ++ C     +E G+QLH   V 
Sbjct: 394 TVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVH 453

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G    +SVGNA+++MY K G+ E AE +F  +   +L+SW ++I+   + GHG KAI  
Sbjct: 454 LGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIEL 513

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYA 407
           F + L  G+  D     TV+  CS    +E G       ++   ++      A +VD++ 
Sbjct: 514 FDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFC 573

Query: 408 KGGDLKSARMLLDGFSCKYTAE-FNAILSG 436
           + G    AR+++D    K  A  + A+L+G
Sbjct: 574 RAGMFSYARIVIDSMPSKPGAPVWEALLAG 603



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 123/542 (22%), Positives = 221/542 (40%), Gaps = 100/542 (18%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDG--MLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           D      LI  Y     L++ +++F+G  + +R ++ + ++I GY  +GD  S L +   
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 150 MYRSEEKFNEHTCSVILEACSLL--EDRIFGEQIHAFAIKSGF----------------- 190
           M R + + ++ T + +L A  L    ++  G Q+H   +K+G                  
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCG-QMHCAVVKTGMGCVSSSVLNALLSVYVK 196

Query: 191 -----------------------ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
                                  + +    T++I+ Y  +     A  VF  +       
Sbjct: 197 RASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAA 256

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
            N MI  Y   G  + A  +   +     + +D T+T +IS C      + GKQ+H   +
Sbjct: 257 WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYIL 316

Query: 288 KFGVVRE----ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH-- 341
           K  +       +SV NA++T+Y K+   +EA ++F A+  RN+I+W A++SGYV +G   
Sbjct: 317 KNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRME 376

Query: 342 ---------------------GGKAINGFLE---------FLDLGICCDSSCLATVIDGC 371
                                 G A NGF +          LD    CD +  A  +  C
Sbjct: 377 EAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFA-FAGALTAC 435

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           SV   LE G QLH   +  GY S + +G A++ +YAK G +++A  +           +N
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-----L 486
           ++++   +         + LF Q    G+ PD +TF  +L+  +    + +GR      L
Sbjct: 496 SMIAALGQH--GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSML 553

Query: 487 HAYSI---KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYAL 542
            +Y I   +  YA        ++ ++ + G    A  +   +  +     W A+L+   +
Sbjct: 554 ESYGITPCEDHYA-------RMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606

Query: 543 HG 544
           HG
Sbjct: 607 HG 608



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 39/317 (12%)

Query: 58  FND--WPQLVKISIGSGDLKLGQAVHAFLLKSG-SQNDTF---EANNLINLYAKFNRLDV 111
           F+D  +  ++      G  ++G+ VHA++LK+  + N +F    +N LI LY K N++D 
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYES-------------------VLGIACDMYR 152
           A+K+F  M VR+ ITW +++ GY++ G  E                    + G+A + + 
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406

Query: 153 SE--EKFNE------HTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
            E  + F +        C       L ACS+L     G Q+HA  +  G+E+++ VG ++
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           ISMY   G    AE+VF  +   D+   N MI    + G    A  +F  +L     P+ 
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDR 526

Query: 261 YTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
            TF  V++ C     VE+G+   + +   +G+         +V ++ + GM   A  + D
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586

Query: 320 AI-SERNLISWTALISG 335
           ++ S+     W AL++G
Sbjct: 587 SMPSKPGAPVWEALLAG 603



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 6/121 (4%)

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G +P     +RLL +    + LV  R L     +     D I    LIT Y   G+++ 
Sbjct: 42  SGFKPRGHFLNRLLEMYCKSSNLVYARQL----FEEIPNPDAIARTTLITAYCALGNLEL 97

Query: 518 AFQIFKG--ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             +IF G  +  RD V +NAM++ YA +G G  AL LF  M+R+ F PDD +   VL A 
Sbjct: 98  GREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSAL 157

Query: 576 I 576
           +
Sbjct: 158 V 158


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 279/473 (58%), Gaps = 3/473 (0%)

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           + +   I+ C E   + EG+Q+H   +       + +G  +VTMY + G  ++A  + D 
Sbjct: 43  HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 102

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + ER+++SWT +ISGY ++    +A++ F++ L  G   +   LATV+  CS   ++  G
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 162

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q+H   +K  + S + +G++L+D+YAK  +++ AR + D    +      AI+SG+ +K
Sbjct: 163 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 222

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
             D+E   + LF Q    GM+ + VTF+ L++  +  A L  G+ +HA  ++      V 
Sbjct: 223 GLDEE--ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 280

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           + N+LI MY+KCG +  + ++F  + +R +VSWNAML  Y  HGLG   + LF+++ +E 
Sbjct: 281 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE- 339

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             PD +++L VL  C + GL + G+ +F+ + +         H+ C++DLLGR+GRL +A
Sbjct: 340 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 399

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
           +NLI + PF  +P +W +L+   ++ AN     L +++LL++EP++AG+++++SN+YA  
Sbjct: 400 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAA 459

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           GM  +  KVR  M +  ++KE G SWI +D  +H F +S + HP  ++I +K+
Sbjct: 460 GMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKI 512



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 211/426 (49%), Gaps = 7/426 (1%)

Query: 40  VAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNL 99
           VA L + S ++    +  F+++   +   I    L  G+ VHA ++ +  +   F    L
Sbjct: 24  VAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRL 83

Query: 100 INLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
           + +Y +   LD A+ + D M  RS ++WT++I GY     +   L +   M R+    NE
Sbjct: 84  VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 143

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
           +T + +L +CS  +    G+Q+H+  +K+ FE+++FVG+SL+ MY  S   +EA  VF  
Sbjct: 144 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 203

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           L  +DV     +I  Y + G  E A  +F  L S   + N  TFT +++       ++ G
Sbjct: 204 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYG 263

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           KQ+H L ++  +   +++ N+++ MY K G    + R+FD + ER+++SW A++ GY R 
Sbjct: 264 KQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRH 323

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVR 397
           G G + I+ F + L   +  DS  L  V+ GCS    ++ GL +    +K     L    
Sbjct: 324 GLGHEVISLFKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGH 382

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
            G  ++D+  + G L+ A  L++    + T      L G     A+     +V    Q+L
Sbjct: 383 YG-CIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELV---AQKL 438

Query: 458 AGMEPD 463
             MEP+
Sbjct: 439 LEMEPE 444


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 182/562 (32%), Positives = 294/562 (52%), Gaps = 3/562 (0%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           QIHA  + SG   + F+ T  ++  ++ G    A  VF       V   N +I  Y+   
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
               A  ++  + +S   P+ +T   V+  C     +E GK++HG   + G   ++ V N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            +V +Y K G  E+A  +F+ + +RN++SWT++ISGY ++G   +A+  F +     +  
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   L +V+   +   +LE G  +HG  +K G   +  L  +L  +YAK G +  AR   
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D         +NA++SG+ +    +E   + LF +     +  D +T    +   A    
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNE--AVGLFQEMISKNIRTDSITVRSAILACAQVGS 386

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L   + +  Y  KT Y  DV V  ALI M+AKCGS+D A ++F    D+D+V W+AM+  
Sbjct: 387 LDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVG 446

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y LHG G+ A+ LF  MK+ G  P+D++ +G+L AC +SGL E G  LF+ + + YG+  
Sbjct: 447 YGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEA 505

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             +H+AC+VDLLGR+G L+EA + I + P      +W  L+   K+  +      A+++L
Sbjct: 506 RHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQL 565

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
             L+P + G ++ +SN+YA   + D  AKVR  M +  LSK+ G S IEI+ KL  F   
Sbjct: 566 FSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVG 625

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
            K HP  +EI+ +L+ L   +K
Sbjct: 626 DKSHPRFKEIFEELESLERRLK 647



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 212/461 (45%), Gaps = 3/461 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +HA L+ SG     F     +N       +  A+K+FD     S   W ++I+GY     
Sbjct: 90  IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
           +   + +   M  S    +  T   +L+ACS +     G+++H    + GFE++VFV   
Sbjct: 150 FGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNG 209

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+++Y   G   +A  VF GL  +++     MI  Y + G    A  +F  +   + +P+
Sbjct: 210 LVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPD 269

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
                +V+    +   +E+GK +HG  VK G+  E  +  ++  MY K G    A   FD
Sbjct: 270 WIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFD 329

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            +   N++ W A+ISGY ++G+  +A+  F E +   I  DS  + + I  C+   +L+L
Sbjct: 330 QMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDL 389

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
              +  +  K  Y +DV + TAL+D++AK G +  AR + D    K    ++A++ G+  
Sbjct: 390 AKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGY-- 447

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
            +    +D + LF   + AG+ P+ VTF  LL+       +  G  L       G  A  
Sbjct: 448 GLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARH 507

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSA 539
                ++ +  + G ++ A+     +     VS W A+L A
Sbjct: 508 QHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGA 548



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 166/354 (46%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K   G   L++G+ VH  + + G ++D F  N L+ LYAK  R++ A+ +F+G+  
Sbjct: 173 PCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDD 232

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R+ ++WTS+I GY  +G     L I   M +   K +      +L A + +ED   G+ I
Sbjct: 233 RNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSI 292

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   +K G E    +  SL +MY   G    A + F  +   +V   N MI  Y K G +
Sbjct: 293 HGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYT 352

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A  +F  ++S +   +  T  + I  C +   ++  K +     K     ++ V  A+
Sbjct: 353 NEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTAL 412

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + M+ K G  + A  +FD   +++++ W+A+I GY   G G  AI+ F      G+C + 
Sbjct: 413 IDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPND 472

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
                ++  C+    +E G +L      +G  +  +    +VD+  + G L  A
Sbjct: 473 VTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEA 526



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 10/281 (3%)

Query: 60  DWPQLVKI---SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINL---YAKFNRLDVAQ 113
           DW  LV +        DL+ G+++H  ++K G +   FE + LI+L   YAK  ++ VA+
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLE---FEPDLLISLTAMYAKCGQVMVAR 325

Query: 114 KLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
             FD M + + + W ++I GY  +G     +G+  +M     + +  T    + AC+ + 
Sbjct: 326 SFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVG 385

Query: 174 DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
                + +  +  K+ + N+VFV T+LI M+   G    A  VF     KDV   + MI+
Sbjct: 386 SLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIV 445

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
            Y   G  + A  +F  +  +   PND TF  +++ C  +  VEEG +L      +G+  
Sbjct: 446 GYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEA 505

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
                  +V + G+ G   EA      +  E  +  W AL+
Sbjct: 506 RHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALL 546


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 183/620 (29%), Positives = 316/620 (50%), Gaps = 40/620 (6%)

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG--CFREAE 214
           F  H     ++ CS  +     +++HA  +++G   + F  + L +    S       A 
Sbjct: 23  FRNHQILSTIDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYAR 79

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYEN 273
           N+F  +   ++   N +I  Y  + +   +F +F+ LL   +  PN +TF  VI    E 
Sbjct: 80  NLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASEL 139

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
                G  +HG+A+K     ++ + N++V  YG  G    AER+F  IS ++++SW ++I
Sbjct: 140 KASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMI 199

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
           S + +      A+  FL+     +  +S  +  V+  C+   +LE G  +  +  + G  
Sbjct: 200 SAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIK 259

Query: 394 SDVRLGTALVDIY-------------------------------AKGGDLKSARMLLDGF 422
            D+ L  A++D+Y                               AK GD  +AR++ +  
Sbjct: 260 VDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAM 319

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM-EPDPVTFSRLLSLSASQACLV 481
             K  A +N ++S + +      ++ + +F++ +L+ + +PD VT    LS  A    + 
Sbjct: 320 PVKEIAAWNVLISAYEQN--GKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAID 377

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G  +H Y  + G   +  + ++L+ MYAKCGS++ A ++F  + +RD+  W+AM++   
Sbjct: 378 LGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLG 437

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
           +HG GK A+ LF EM+     P+ ++   VL AC ++GL + G   F+E+E +YG+ P +
Sbjct: 438 MHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEM 497

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           +H+ACMVD+LGRAG L EAM LIN    + S  +W  L+    L  N +   LAS +LL 
Sbjct: 498 KHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLK 557

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           LEP++ G+ +L+SN+YA  G  ++ +++R  M D  L KE GCS IE +  +H F+    
Sbjct: 558 LEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDN 617

Query: 722 DHPESEEIYSKLDLLNDEMK 741
            HP S  IYSKL+ +  ++K
Sbjct: 618 THPLSSNIYSKLEEIATKLK 637



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 246/536 (45%), Gaps = 40/536 (7%)

Query: 45  SISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYA 104
           S+ + S     LLF +   L  I   S   +L + VHA +L++G   D F A+ L    A
Sbjct: 10  SLQNFSTLNNNLLFRNHQILSTIDKCSSSKQLKE-VHARMLRTGLFFDPFSASKLFTASA 68

Query: 105 --KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHT 161
              F+ LD A+ LFD +   +  TW +LI+ Y    D      I  D+  + E+  N+ T
Sbjct: 69  LSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFT 128

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
              +++A S L+    G  +H  AIK  F  ++++  SL+  Y   G    AE +F+G++
Sbjct: 129 FPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGIS 188

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
            KDV   N MI  + +    E A  +F+ +   +  PN  T   V+S C + L +E G+ 
Sbjct: 189 CKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRW 248

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG- 340
           +     + G+  ++++ NA++ MY K G  ++A+++FD + ER++ SWT ++ GY + G 
Sbjct: 249 VCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGD 308

Query: 341 ---------------------------HGGKAINGFLEFLDLGIC----CDSSCLATVID 369
                                        GK       F +L +      D   L + + 
Sbjct: 309 YDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLS 368

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+    ++LG  +H +  + G + +  L ++LVD+YAK G L+ A  +      +    
Sbjct: 369 ACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYV 428

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHA 488
           ++A+++G    +    +  + LF + + A ++P+ VTF+ +L   +    +  GR   H 
Sbjct: 429 WSAMIAGL--GMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHE 486

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
                G   ++     ++ +  + G ++ A ++   +S     S W A+L A +LH
Sbjct: 487 MEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLH 542


>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
          Length = 667

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 186/620 (30%), Positives = 321/620 (51%), Gaps = 14/620 (2%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWT-SLIKGYLDDGDYESVLGIACDMYRSEE 155
           + L  +Y    R   A  L   M     ++++ SL++ Y   G +   L +    Y +  
Sbjct: 49  HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAV----YSAMR 104

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
            F+  T     +AC+ L     G  +H  A+ +GF  + +V  +LISMY   G    AE 
Sbjct: 105 AFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEA 164

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +  + V   N +I    K G +E A  VF  + +     +  T  +V+  C +   
Sbjct: 165 VFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKD 224

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
           +  G+ +H L    G+   ++V NA++ MYGK    E+A R+FD    +++++SWTA+I 
Sbjct: 225 LNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIG 284

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ---LHGFAIKHG 391
            YV +    +AI+   + L  G    +    T++   S C+++  G      H   I+ G
Sbjct: 285 AYVLNDRAFEAISLGCQMLMSGAAWPNG--VTMVYLLSACASMPSGKHAKCTHALCIRLG 342

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
             SD+ + TAL+D YA+ G +K  R+ L+  S +    +NA LSG+   ++  E+  + L
Sbjct: 343 LKSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGY--TVSGREKKAIEL 399

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           F +     + PD  T + +L   A  A L  G+++H + +  G+     +   LI +Y+K
Sbjct: 400 FKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSK 459

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGV 571
            G +D A+ +F+ + ++D+V+W  +++ Y++HG  + A+LL++ M   G  P+ ++I  +
Sbjct: 460 AGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATL 519

Query: 572 LQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSE 631
           L AC ++G+ + GI +F ++  ++GL P  EH++C+VD+LGRAGR+ EA  LI   PF  
Sbjct: 520 LYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEP 579

Query: 632 SPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
           S  +W  L+    L  N +F  +A+KRL  L+P++ GS++L+ N+YA      +   VR 
Sbjct: 580 STSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRR 639

Query: 692 TMNDLRLSKEAGCSWIEIDS 711
            M +  L KE G S +E  S
Sbjct: 640 MMVERGLLKEPGSSLVEARS 659



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 211/477 (44%), Gaps = 19/477 (3%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+AVH   L +G   DT+  N LI++Y     +  A+ +F  M  R+ ++W ++I G + 
Sbjct: 127 GRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVK 186

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G  E  L +  +M       +  T   +L AC+  +D   G  +H      G  + V V
Sbjct: 187 NGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAV 246

Query: 197 GTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
             +LI MY       +A  VF    + KDV     MI  Y     +  A  +   +L S 
Sbjct: 247 KNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSG 306

Query: 256 FE-PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              PN  T   ++S C      +  K  H L ++ G+  +I+V  A++  Y + G  +  
Sbjct: 307 AAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLM 366

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
               +  S R   +W A +SGY  SG   KAI  F   +   +  DS+ +A+++   +  
Sbjct: 367 RLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAES 425

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           ++L+ G  +H F +  G+L    + T L+D+Y+K GDL +A  L      K    +  I+
Sbjct: 426 ADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTII 485

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-------RSLH 487
           +G+   I       ++L+ +   +G +P+ VT + LL   +    +  G       R++H
Sbjct: 486 AGY--SIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVH 543

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
                 G   +    + L+ M  + G I+ A ++ + +      S W A+L A  LH
Sbjct: 544 ------GLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLH 594



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 170/352 (48%), Gaps = 6/352 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV-RSAITWTSLI 131
           DL  G+AVH  +   G  +     N LI++Y K   L+ A+++FD     +  ++WT++I
Sbjct: 224 DLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMI 283

Query: 132 KGY-LDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
             Y L+D  +E++  + C M  S   + N  T   +L AC+ +      +  HA  I+ G
Sbjct: 284 GAYVLNDRAFEAI-SLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLG 342

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            ++++ V T+LI  Y   G  +         +++     N  +  Y  +G  + A  +F 
Sbjct: 343 LKSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFK 401

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +++    P+  T  +++    E+  ++EGK +H   +  G +R   +   ++ +Y K G
Sbjct: 402 RMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAG 461

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             + A  +F  + E+++++WT +I+GY   GH   AI  +   ++ G   ++  +AT++ 
Sbjct: 462 DLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLY 521

Query: 370 GCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            CS    ++ G+++       HG + +    + LVD+  + G ++ A  L+ 
Sbjct: 522 ACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQ 573



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S DLK G+ +H FLL  G    T  A  LI++Y+K   LD A  LF  +  +  + WT++
Sbjct: 425 SADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTI 484

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           I GY   G   + + +   M  S  K N  T + +L ACS
Sbjct: 485 IAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACS 524


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 184/675 (27%), Positives = 334/675 (49%), Gaps = 62/675 (9%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G    ++ + +HA ++  G  +     N LI+LY+K   +D+A+ +F+ + ++ +++W +
Sbjct: 124 GKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVA 183

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G   +G  +  + + C M++S      +  S +L AC+ +E    GEQ+H F +K G
Sbjct: 184 MISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG 243

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             +  FV  +L+++Y   G    AE +F  +  +D    N +I    + G S+ A  +F 
Sbjct: 244 LSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFE 303

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +     +P+  T  +++S C       +GKQLH   +K G+  ++ +  +++ +Y K  
Sbjct: 304 KMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF 363

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E A   F      N++ W  ++  Y + G+  ++   FL+    G+  +     +++ 
Sbjct: 364 DIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILR 423

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+    L+LG Q+H   IK G+  +V + + L+D+YAK G+L +AR +L     +    
Sbjct: 424 TCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS 483

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A+++G+ +   D   + + LF +    G+  D + FS  +S  A    L +G+ +HA 
Sbjct: 484 WTAMIAGYTQH--DLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQ 541

Query: 490 SIKTGYAADVIVGNAL-----ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
           S  +GY+ D+ +GNAL     IT+Y+KCGSI+ A + F  + ++++VSWNAM++ Y+ HG
Sbjct: 542 SYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHG 601

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
            G  A+ LFE                                   E++Q+ GL P     
Sbjct: 602 YGSEAVSLFE-----------------------------------EMKQL-GLMP----- 620

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
                           +  +   P     ++WRTL+S   +  N +    A++ LL+LEP
Sbjct: 621 --------------NHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEP 666

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
           +D+ +++L+SNMYA  G  D   + R  M D  + KE G SWIE+ + +H F    + HP
Sbjct: 667 EDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHP 726

Query: 725 ESEEIYSKLDLLNDE 739
            +E+IY  +D LN+ 
Sbjct: 727 LAEQIYEYIDDLNER 741



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 228/471 (48%), Gaps = 4/471 (0%)

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + N  T   + E C      +  +++HA   KSGF+    +G+ LI +Y   G    A  
Sbjct: 7   RANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIK 66

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           +F  +   +V   N +I        +     +F  +++ +  P++ TF +V+  C     
Sbjct: 67  LFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKA 126

Query: 276 -VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
             +  +Q+H   +  G      V N ++ +Y K+G  + A+ +F+ +  ++ +SW A+IS
Sbjct: 127 PFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMIS 186

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           G  ++G   +AI  F +     +       ++V+  C+     +LG QLHGF +K G  S
Sbjct: 187 GLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSS 246

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
           +  +  ALV +Y++ G+L +A  +      +    +N+++SG  ++   D    + LF +
Sbjct: 247 ETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDR--ALQLFEK 304

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
            +L  M+PD VT + LLS  AS     +G+ LH+Y IK G ++D+I+  +L+ +Y KC  
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           I+ A + F      ++V WN ML AY   G    +  +F +M+ EG  P+  +   +L+ 
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
           C   G  + G  +  ++ +  G +  +   + ++D+  + G L  A  ++ 
Sbjct: 425 CTSLGALDLGEQIHTQVIK-SGFQFNVYVCSVLIDMYAKHGELDTARGILQ 474



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 125/272 (45%), Gaps = 16/272 (5%)

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           GI  +      + +GC    +L    +LH    K G+  +  LG+ L+DIY   G++ +A
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL-SLS 474
             L D       + +N ++SG + K    +  V+ LFS      + PD  TF+ +L + S
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQ--VLGLFSLMITENVTPDESTFASVLRACS 122

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
             +A       +HA  I  G+ +  +V N LI +Y+K G +D A  +F+ +  +D VSW 
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWV 182

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM+S  + +G    A+LLF +M +    P       VL AC         I LF   EQ+
Sbjct: 183 AMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACT-------KIELFKLGEQL 235

Query: 595 YGLRPIL----EHFAC--MVDLLGRAGRLSEA 620
           +G         E F C  +V L  R G L  A
Sbjct: 236 HGFIVKWGLSSETFVCNALVTLYSRWGNLIAA 267



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 5/214 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++     G L LG+ +H  ++KSG Q + +  + LI++YAK   LD A+ +   + 
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               ++WT++I GY     +   L +  +M     + +    S  + AC+ ++    G+Q
Sbjct: 478 EEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ 537

Query: 181 IHAFAIKSGFENNVFVGTS-----LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
           IHA +  SG+  ++ +G +     LI++Y   G   +A+  F  +  K+V   N MI  Y
Sbjct: 538 IHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGY 597

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
           ++ G    A  +F  +      PN  TF   + +
Sbjct: 598 SQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPI 631



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 17/191 (8%)

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G+  +  T+  L     +   L+  + LHA   K+G+  + ++G+ LI +Y   G +D A
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F  I   ++  WN ++S      L    L LF  M  E   PD+ +   VL+AC   
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRAC--- 121

Query: 579 GLSEGGICLFNEIEQIYGLRPILEH------FAC--MVDLLGRAGRLSEAMNLINSSPFS 630
               GG   F   EQI+    I+ H        C  ++DL  + G +  A  L+    F 
Sbjct: 122 ---SGGKAPFQVTEQIHA--KIIHHGFGSSPLVCNPLIDLYSKNGHVDLA-KLVFERLFL 175

Query: 631 ESPLLWRTLVS 641
           +  + W  ++S
Sbjct: 176 KDSVSWVAMIS 186


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 195/647 (30%), Positives = 325/647 (50%), Gaps = 17/647 (2%)

Query: 76  LGQAVHAFLLKSG----SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           +G +VHA+ ++ G            ++L+ +YA+   +  A KLF+ M  R  + WT+++
Sbjct: 128 VGASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVV 187

Query: 132 KGYLDDGDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
            G + +G+    L    +M R     + + N  T    LEAC +L++   G  +H +A+K
Sbjct: 188 SGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVK 247

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
            G  ++  V ++L SMY       +A ++F  L  KDV     +I  Y   G    A  +
Sbjct: 248 VGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMEL 307

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  ++ S  +P+D   + ++S    +  V  GK  H + +K      + VGNA+++MYGK
Sbjct: 308 FQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGK 367

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF--LEFLDL-GICCDSSCL 364
             + + A R+F  + +R+  SW  +I GY ++G   K +  +  ++F D     CD++ L
Sbjct: 368 FELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSL 427

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
            + I  CS    L LG   H ++IKH    D  +   L+ +Y + G    A  +      
Sbjct: 428 VSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKL 487

Query: 425 KY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
           K     +N ++S +           + L+ Q    G+ P+  T   ++S  A+   L RG
Sbjct: 488 KGDVVTWNTLISSYAH--LGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERG 545

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             +H+Y  + G+  DV +  ALI MYAKCG +  A +IF  +   D+V+WN M+S Y +H
Sbjct: 546 EKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMH 605

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G  K AL LF +M+     P+ ++ L +L AC +SGL E G  LF  + + Y L P L+H
Sbjct: 606 GEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGK-YSLEPNLKH 664

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           +ACMVDLLG++G L EA +++ + P      +W TL+S  KL  + +  +  +K+    +
Sbjct: 665 YACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASD 724

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            ++ G +IL+SN Y      DE  K+R  M +  + K AG  W  +D
Sbjct: 725 AENEGYYILISNSYGSAKKWDEIEKLREAMKNHGVQKGAG--WSAVD 769



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 245/533 (45%), Gaps = 23/533 (4%)

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           ++HA A+ SG      +   L+S Y  +G    A   F      D    N +I  ++ A 
Sbjct: 30  RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCAS 89

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR----EI 295
           +   A +    +L+S   P+ +T     S   E   +  G  +H   V++G++      +
Sbjct: 90  DFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSV 149

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           +V +++V MY + G+  +A ++F+ + ER++++WTA++SG VR+G  G  +   +E + L
Sbjct: 150 AVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRL 209

Query: 356 G----ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
                   +S  + + ++ C V   L  G  LHG+A+K G      + +AL  +Y+K   
Sbjct: 210 AGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHS 269

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
            + A  L      K    + +++  +  +    E   M LF +   +G++PD V  S LL
Sbjct: 270 TEDACSLFPELPEKDVVSWTSLIGIYCWRGLIRE--AMELFQEMMESGLQPDDVLVSCLL 327

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           S   +   +  G++ HA  +K  +  +V+VGNALI+MY K   +D A ++F+ +  RD  
Sbjct: 328 SGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDAD 387

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREG---FAPDDISILGVLQACIYSGLSEGGICLF 588
           SWN M+  Y   G     L L+ EM+      F  D  S++  + +C  S L E      
Sbjct: 388 SWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSC--SRLVE---LRL 442

Query: 589 NEIEQIYGLRPILEHFACMVDLL----GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
                 Y ++  L+  + + ++L    GR G+   A  +   +      + W TL+S   
Sbjct: 443 GRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYA 502

Query: 645 LMANSKFSI-LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
            + +S  ++ L  + L +    ++ + I V +  A    L+   K+ + + ++
Sbjct: 503 HLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEM 555



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 166/350 (47%), Gaps = 6/350 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG++  G+A HA ++K    ++    N LI++Y KF  +D A ++F  +  R A +W  +
Sbjct: 333 SGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLM 392

Query: 131 IKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSVI--LEACSLLEDRIFGEQIHAFAIK 187
           I GY   G     L +  +M +R   +F     S++  + +CS L +   G   H ++IK
Sbjct: 393 IVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIK 452

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLA--YKDVRCVNFMILEYNKAGESEMAF 245
              + +  V   LI MY   G F  A  +F GLA    DV   N +I  Y   G S  A 
Sbjct: 453 HWLDEDSSVANVLIGMYGRCGKFDHACKIF-GLAKLKGDVVTWNTLISSYAHLGHSNTAV 511

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            ++  +L+    PN  T   VIS C   + +E G+++H    + G   ++S+  A++ MY
Sbjct: 512 SLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMY 571

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G    A R+FD++ + ++++W  +ISGY   G   +A+  F +     I  +     
Sbjct: 572 AKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFL 631

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            ++  C     LE G QL     K+    +++    +VD+  K G L+ A
Sbjct: 632 AILSACCHSGLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEA 681


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 173/568 (30%), Positives = 301/568 (52%), Gaps = 11/568 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q H   ++ G   + ++   L+    H    + A  VF    + ++   N +I      
Sbjct: 20  KQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSN 79

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVC-----YENLGVEEGKQLHGLAVKFGVVR 293
                A  V+  +    F P+++TF  V+  C     Y ++G+     LH L +K G   
Sbjct: 80  DAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGL----SLHSLVIKTGFDW 135

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
           ++ V   +V +Y K+G   +A ++FD I E+N++SWTA+I GY+ SG  G+A+  F   L
Sbjct: 136 DVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLL 195

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
           ++G+  DS  L  ++  CS   +L  G  + G+  + G + +V + T+LVD+YAK G ++
Sbjct: 196 EMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSME 255

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
            AR + DG   K    ++A++ G+       +E + V F  QR   + PD      + S 
Sbjct: 256 EARRVFDGMVEKDVVCWSALIQGYASN-GMPKEALDVFFEMQR-ENVRPDCYAMVGVFSA 313

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +    L  G           + ++ ++G ALI  YAKCGS+  A ++FKG+  +D V +
Sbjct: 314 CSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVF 373

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           NA++S  A+ G    A  +F +M + G  PD  + +G+L  C ++GL + G   F+ +  
Sbjct: 374 NAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSS 433

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
           ++ + P +EH+ CMVDL  RAG L EA +LI S P   + ++W  L+   +L  +++ + 
Sbjct: 434 VFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAE 493

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
              K+L++LEP ++G ++L+SN+Y+     DEA K+R+++N   + K  GCSW+E+D  +
Sbjct: 494 HVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVV 553

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK 741
           H F+     HP S +IY KL+ L  +++
Sbjct: 554 HEFLVGDTSHPLSHKIYEKLESLFKDLR 581



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 216/478 (45%), Gaps = 7/478 (1%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G   L   +  H  LL+ G   DT+  N L+     F     A  +F      +   + +
Sbjct: 12  GLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNT 71

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI-FGEQIHAFAIKS 188
           LI+G + +  +   + +   M +     +  T   +L+AC+ L      G  +H+  IK+
Sbjct: 72  LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           GF+ +VFV T L+ +Y  +G   +A  VF  +  K+V     +I  Y ++G    A  +F
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLF 191

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
             LL     P+ +T   ++  C     +  G+ + G   + G V  + V  ++V MY K 
Sbjct: 192 RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  EEA R+FD + E++++ W+ALI GY  +G   +A++ F E     +  D   +  V 
Sbjct: 252 GSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVF 311

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             CS    LELG    G      +LS+  LGTAL+D YAK G +  A+ +  G   K   
Sbjct: 312 SACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCV 371

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            FNA++SG    +         +F Q    GM+PD  TF  LL    + A LV     + 
Sbjct: 372 VFNAVISGL--AMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLC-GCTHAGLVDDGHRYF 428

Query: 489 YSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
             + + ++    + +   ++ + A+ G +  A  + + +  + + + W A+L    LH
Sbjct: 429 SGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLH 486



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 39/251 (15%)

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L + +  H   ++ G   D  + N L+       +   A  +F      +I  +N ++  
Sbjct: 16  LHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRG 75

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC------IYSGLS------------ 581
              +   + A+ ++  M++ GFAPD+ +   VL+AC       + GLS            
Sbjct: 76  MVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDW 135

Query: 582 -----EGGICLFNEIEQIYGLRPILEH--------FACMVDLLGRAGRLSEAMNLINSSP 628
                 G +CL+++   +   R + +         +  ++     +G   EA+ L     
Sbjct: 136 DVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRG-- 193

Query: 629 FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS----FILVS--NMYAGQGM 682
             E  L   +   V  L A S+   LAS R +D   +++GS    F+  S  +MYA  G 
Sbjct: 194 LLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGS 253

Query: 683 LDEAAKVRTTM 693
           ++EA +V   M
Sbjct: 254 MEEARRVFDGM 264


>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 615

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 167/496 (33%), Positives = 264/496 (53%), Gaps = 7/496 (1%)

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F ++  +L     P+ YT   ++  C ++    E  Q+H  ++K G+   + V N ++  
Sbjct: 123 FSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRF 182

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y   G  E  E++FD     +LISWT LI  Y + G+  +AI  F     +    D   L
Sbjct: 183 YAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFR---MNCTADRMTL 239

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGY--LSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
             V+  CS   +  LG ++  +   H +   SDV LG AL+D+Y K G    AR L    
Sbjct: 240 VVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLM 299

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    +N+++SG   +    E   + +F + +  G++PD VT   +L+  A+   L  
Sbjct: 300 PVKNLVSWNSMISGLAHQGLFKE--ALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLEL 357

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +H+Y  K    AD  V NAL+ MYAKCGSID AF +F+ +  +D+ S+ AM+  +A+
Sbjct: 358 GKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAM 417

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG    AL +F EM R G  PD ++++GVL AC ++GL E G   F ++ ++Y L+P  E
Sbjct: 418 HGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTE 477

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ CMVDLLGRAG +SEA    N  P      +W +L+   K+ A  +      ++L+++
Sbjct: 478 HYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEM 537

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EP+  G++IL+SN+Y+      +A K R  M    + K  GCS IE+D  +H F    K 
Sbjct: 538 EPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKGEKS 597

Query: 723 HPESEEIYSKLDLLND 738
           HP+S E+ S  +++ +
Sbjct: 598 HPKSREMISNSNIIKE 613



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 15/333 (4%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           + +T   +L+ACS     I   QIHA +IK+G  +N+FV  +L+  Y  SG     E VF
Sbjct: 137 DTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVF 196

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
               + D+     +I  Y+K G    A   F  +   +   +  T   V+S C +     
Sbjct: 197 DQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFT 253

Query: 278 EGKQL-----HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
            GK++     H L   F V  ++ +GNA++ MY K G    A ++F  +  +NL+SW ++
Sbjct: 254 LGKKILAYMDHHL---FDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSM 310

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           ISG    G   +A++ F     +G+  DS  L  V++ C+   +LELG  +H +  K+  
Sbjct: 311 ISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHM 370

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIADDEEDVMVL 451
            +D  +  ALVD+YAK G +  A M+     CK    + A++ GF M   AD     + +
Sbjct: 371 KADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKAD---RALAI 427

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           FS+    G+ PD VT   +LS  +    L  GR
Sbjct: 428 FSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGR 460



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 156/322 (48%), Gaps = 7/322 (2%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P L+K    S        +HA  +K+G  ++ F  N L+  YA    ++  +K+FD    
Sbjct: 142 PYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPH 201

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
              I+WT+LI+ Y   G Y S   IA   +R     +  T  V+L ACS L D   G++I
Sbjct: 202 WDLISWTTLIQAYSKMG-YPSE-AIAA-FFRMNCTADRMTLVVVLSACSQLGDFTLGKKI 258

Query: 182 HAFAIKSGFE--NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            A+     F+  ++VF+G +L+ MY   G    A  +F  +  K++   N MI      G
Sbjct: 259 LAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQG 318

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVG 298
             + A H+F  + +   +P+  T   V++ C  NLG +E GK +H    K  +  +  V 
Sbjct: 319 LFKEALHMFRRMQTMGLKPDSVTLVGVLNSC-ANLGDLELGKWVHSYIDKNHMKADGYVA 377

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA+V MY K G  ++A  +F A+  +++ S+TA+I G+   G   +A+  F E   +G+ 
Sbjct: 378 NALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVR 437

Query: 359 CDSSCLATVIDGCSVCSNLELG 380
            D   L  V+  CS    LE G
Sbjct: 438 PDHVTLVGVLSACSHAGLLEEG 459



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 120/247 (48%), Gaps = 3/247 (1%)

Query: 72  GDLKLGQAVHAFLLKS--GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           GD  LG+ + A++        +D F  N L+++Y K  +  +A++LF  M V++ ++W S
Sbjct: 250 GDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNS 309

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G    G ++  L +   M     K +  T   +L +C+ L D   G+ +H++  K+ 
Sbjct: 310 MISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNH 369

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            + + +V  +L+ MY   G   +A  VF+ +  KDV     MI+ +   G+++ A  +F 
Sbjct: 370 MKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFS 429

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKH 308
            +      P+  T   V+S C     +EEG++    ++  + +  +      +V + G+ 
Sbjct: 430 EMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRA 489

Query: 309 GMSEEAE 315
           G+  EAE
Sbjct: 490 GLISEAE 496



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 4/146 (2%)

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           FNAI+   +    +    +  L+ Q  L G+ PD  T   LL   +     +    +HA+
Sbjct: 105 FNAIIQS-LSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAH 163

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           SIKTG ++++ V N L+  YA  G I+   ++F      D++SW  ++ AY+  G    A
Sbjct: 164 SIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEA 223

Query: 550 LLLFEEMKREGFAPDDISILGVLQAC 575
           +  F  M       D ++++ VL AC
Sbjct: 224 IAAFFRM---NCTADRMTLVVVLSAC 246


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 164/479 (34%), Positives = 268/479 (55%), Gaps = 22/479 (4%)

Query: 282 LHGLAVKFGVVREISVGNAIVTM----------YGKHGMS----------EEAERMFDAI 321
           LH LA++ G   +    NA++ +          +G +G S          E   ++FD +
Sbjct: 71  LHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEM 130

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
            ER+ +SW  LI G        +A++   E    G   D+  L+TV+   + C++++ G+
Sbjct: 131 LERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGM 190

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
            +HG+AIK+G+ +DV +G++L+D+YA    +  +  + D FS      +N++L+G+ +  
Sbjct: 191 VVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQN- 249

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
               E+ + +F +   AG+ P PVTFS L+    + + L  G+ LHAY I+  +  ++ +
Sbjct: 250 -GSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFI 308

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            ++LI MY KCG++D A ++F GI   DIVSW AM+  YALHG    A +LFE M+    
Sbjct: 309 SSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNV 368

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            P+ I+ L VL AC ++GL + G   FN +   YG  P LEH A + D LGRAG L EA 
Sbjct: 369 KPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAY 428

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
           N I+      +  +W TL+   ++  N+  +   +K++ +LEPK  GS +++SNMY+  G
Sbjct: 429 NFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASG 488

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
             +EAA++R +M    + KE  CSWIE+ +KLH F+A  K HP  + I   L++ +++M
Sbjct: 489 RWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQM 547



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 198/425 (46%), Gaps = 30/425 (7%)

Query: 38  SQVAYLCSIS-----SVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQND 92
           SQ  +L +IS       S + R+ +    P  +K   G G   L  ++HA  ++SGS  D
Sbjct: 24  SQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFAD 83

Query: 93  TFEANNLINLYAKFNRL--------------------DVAQKLFDGMLVRSAITWTSLIK 132
            F AN L+NL  K                        +  +K+FD ML R A++W +LI 
Sbjct: 84  RFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLIL 143

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G  +   ++  L +  +M+R     +  T S +L   +   D   G  +H +AIK+GF+N
Sbjct: 144 GCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDN 203

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +VFVG+SLI MY +      +  VF   +  D    N M+  Y + G  E A  +F  +L
Sbjct: 204 DVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRML 263

Query: 253 SSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            +   P   TF+++I   + NL  +  GKQLH   ++      I + ++++ MY K G  
Sbjct: 264 QAGVRPVPVTFSSLIPA-FGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNV 322

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-ICCDSSCLATVIDG 370
           + A R+F+ I   +++SWTA+I GY   G   +A   F E ++LG +  +      V+  
Sbjct: 323 DIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLF-ERMELGNVKPNHITFLAVLTA 381

Query: 371 CSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           CS    ++ G +  +  + ++G++  +    AL D   + GDL  A   +     K T+ 
Sbjct: 382 CSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSS 441

Query: 430 FNAIL 434
             + L
Sbjct: 442 VWSTL 446



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 138/269 (51%), Gaps = 4/269 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
            D+K G  VH + +K+G  ND F  ++LI++YA   ++D + K+FD      A+ W S++
Sbjct: 184 ADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSML 243

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G  E  LGI   M ++  +    T S ++ A   L     G+Q+HA+ I++ F 
Sbjct: 244 AGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFN 303

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +N+F+ +SLI MY   G    A  VF G+   D+     MI+ Y   G +  AF +F  +
Sbjct: 304 DNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERM 363

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
              + +PN  TF  V++ C     V+ G K  + ++ ++G V  +    A+    G+ G 
Sbjct: 364 ELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGD 423

Query: 311 SEEAERMFDAISERNLISWTALISGYVRS 339
            +EA   ++ ISE  +   +++ S  +R+
Sbjct: 424 LDEA---YNFISEMKIKPTSSVWSTLLRA 449



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 185/401 (46%), Gaps = 26/401 (6%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY-----FH-------------- 206
           L++C+ L        +HA AI+SG   + F   +L+++      FH              
Sbjct: 56  LKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGL 115

Query: 207 -SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
            S  +     VF  +  +D    N +IL   +    + A  +   +    F P+ +T + 
Sbjct: 116 ESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLST 175

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
           V+ +  E   ++ G  +HG A+K G   ++ VG++++ MY      + + ++FD+ S+ +
Sbjct: 176 VLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCD 235

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
            + W ++++GY ++G   +A+  F   L  G+       +++I      S L LG QLH 
Sbjct: 236 AVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHA 295

Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
           + I+  +  ++ + ++L+D+Y K G++  AR + +G        + A++ G+   +    
Sbjct: 296 YLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGY--ALHGPT 353

Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG--RSLHAYSIKTGYAADVIVGN 503
            +  VLF +  L  ++P+ +TF  +L+ + S A LV    +  ++ S + G+   +    
Sbjct: 354 TEAFVLFERMELGNVKPNHITFLAVLT-ACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCA 412

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
           AL     + G +D A+     +  +   S W+ +L A  +H
Sbjct: 413 ALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVH 453


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 196/689 (28%), Positives = 347/689 (50%), Gaps = 8/689 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLF 116
           F D    V +   +GD+   + + A +  S     D    N ++  Y K   +  A+ +F
Sbjct: 80  FVDPAAYVSLLKQAGDVTALKTIQAHISHSKRFSGDRLLLNCVVEAYGKCGCVKDARLVF 139

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
             +   +  +WT L+  Y  +G +++VL +   M       N  T + ++ A S L D  
Sbjct: 140 SSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWD 199

Query: 177 FGEQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
              +IHA A  +     +V + T+LI MY   G    AE VF     KD+ C N MI  Y
Sbjct: 200 EARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAY 259

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G +  A   F  +  S  +PN  T+  +   C  N    + +  H   +   +  ++
Sbjct: 260 IQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDV 319

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V  A+V+MY + G  E+A R+FD +  +N+++W  +I+GY + G+  +A+  ++     
Sbjct: 320 VVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAA 379

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D      V++ CS+  +L  G  +H   +  GY S + + +AL+ +Y+  G L  A
Sbjct: 380 GVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDA 439

Query: 416 RMLLDGFSCKYTAEFNAI-LSGFMEKIADDEE--DVMVLFSQQRLAGMEPDPVTFSRLLS 472
              +D F    T   + I  +  +  +  + E    + LF +  L G++ + VTF   + 
Sbjct: 440 ---VDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTID 496

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
             +S   LV G ++    I TGY  DV++G +LI +Y KCG +D A ++F  +S ++IV+
Sbjct: 497 ACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVT 556

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           WN +L+A + +G    +  L +EM  +G  P+++++L +L  C ++GL    +  F  + 
Sbjct: 557 WNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMV 616

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
             + L P  EH+ C+VDLLGR+G+L E    I+S PFS   +LW +L+    + ++ +  
Sbjct: 617 YGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERG 676

Query: 653 ILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
           + A++R+L L+PK+A  ++L+SNM+A  GMLD    +     +  + KE   S+IE++  
Sbjct: 677 LRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVNGV 736

Query: 713 LHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +H F      H   E+I ++L   ++EM+
Sbjct: 737 VHEFGVRAGLHRLGEKIGAQLREWSEEME 765


>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19191, mitochondrial; Flags: Precursor
 gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 190/630 (30%), Positives = 319/630 (50%), Gaps = 5/630 (0%)

Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           + ++L+    + S   W   I+  ++  D    L +  +M R   + N  T   + +AC+
Sbjct: 4   IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63

Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
            L D    E +HA  IKS F ++VFVGT+ + M+        A  VF  +  +D    N 
Sbjct: 64  RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123

Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
           M+  + ++G ++ AF +F  +  ++  P+  T   +I        ++  + +H + ++ G
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAING 348
           V  +++V N  ++ YGK G  + A+ +F+AI   +R ++SW ++   Y   G    A   
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           +   L      D S    +   C     L  G  +H  AI  G   D+      + +Y+K
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSK 303

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
             D  SAR+L D  + +    +  ++SG+ EK   D ++ + LF     +G +PD VT  
Sbjct: 304 SEDTCSARLLFDIMTSRTCVSWTVMISGYAEK--GDMDEALALFHAMIKSGEKPDLVTLL 361

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISD 527
            L+S       L  G+ + A +   G   D V++ NALI MY+KCGSI  A  IF    +
Sbjct: 362 SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 421

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
           + +V+W  M++ YAL+G+   AL LF +M    + P+ I+ L VLQAC +SG  E G   
Sbjct: 422 KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEY 481

Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           F+ ++Q+Y + P L+H++CMVDLLGR G+L EA+ LI +        +W  L++  K+  
Sbjct: 482 FHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHR 541

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           N K +  A++ L +LEP+ A  ++ ++N+YA  GM D  A++R+ M    + K  G S I
Sbjct: 542 NVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
           +++ K H F      H E+E IY  L+ L+
Sbjct: 602 QVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 229/492 (46%), Gaps = 15/492 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P + K      D+   + VHA L+KS   +D F     ++++ K N +D A K+F+ M 
Sbjct: 55  FPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP 114

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R A TW +++ G+   G  +    +  +M  +E   +  T   ++++ S  +     E 
Sbjct: 115 ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA 174

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV--NFMILEYNKA 238
           +HA  I+ G +  V V  + IS Y   G    A+ VF  +   D   V  N M   Y+  
Sbjct: 175 MHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVF 234

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           GE+  AF ++  +L  +F+P+  TF N+ + C     + +G+ +H  A+  G  ++I   
Sbjct: 235 GEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAI 294

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N  ++MY K   +  A  +FD ++ R  +SWT +ISGY   G   +A+  F   +  G  
Sbjct: 295 NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK 354

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARM 417
            D   L ++I GC    +LE G  +   A  +G   D V +  AL+D+Y+K G +  AR 
Sbjct: 355 PDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 414

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +  +++G+   +     + + LFS+      +P+ +TF  +L   A  
Sbjct: 415 IFDNTPEKTVVTWTTMIAGY--ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHS 472

Query: 478 ACLVRGRSL-----HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIV 531
             L +G          Y+I  G        + ++ +  + G ++ A ++ + +S + D  
Sbjct: 473 GSLEKGWEYFHIMKQVYNISPGLDH----YSCMVDLLGRKGKLEEALELIRNMSAKPDAG 528

Query: 532 SWNAMLSAYALH 543
            W A+L+A  +H
Sbjct: 529 IWGALLNACKIH 540


>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 168/502 (33%), Positives = 282/502 (56%), Gaps = 5/502 (0%)

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           +  H++  + + +  PN++TF  V   C     +   +  H    K G+  +    N++V
Sbjct: 100 LTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMV 159

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD-LGICCDS 361
           TMY + G +  A ++FD I+E++L+SW +L+SGY + G   +A+  F    +  G   D 
Sbjct: 160 TMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDE 219

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             L +V+  C    +LELG  + GF ++ G   +  +G+AL+ +Y+K G+L S+R + DG
Sbjct: 220 MSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDG 279

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              +    +NA +S + +    DE   + LF   +  G++P+ VT + +LS  AS   L 
Sbjct: 280 MPSRDFITWNAAISAYAQNGMADE--AISLFHSMKENGVDPNKVTLTAVLSACASIGALD 337

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ +  Y+   G   D+ V  ALI MYAKCGS++ A ++F  +  ++  SWNAM+SA A
Sbjct: 338 LGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALA 397

Query: 542 LHGLGKGALLLFEEMKREGFA--PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
            HG  K AL LFE M  EG +  P+DI+ + +L AC+++GL + G  LF+ +  ++GL P
Sbjct: 398 SHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVP 457

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            +EH++CMVDLL RAG L EA ++I   P     +    L S  +   N        + L
Sbjct: 458 KIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQML 517

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           L+L+P ++G++I+ S +Y    M D+AA++R  M +  ++K  GCSWIE+ ++L  F++ 
Sbjct: 518 LELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSG 577

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
                +S ++ + +DLL +E+K
Sbjct: 578 DGLTLDSIDVRNIIDLLYEELK 599



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 198/429 (46%), Gaps = 17/429 (3%)

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           F+ ML  +  TW           DY   L +   M       N  T   +  AC+ LE+ 
Sbjct: 84  FNIMLRATTTTW----------HDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEI 133

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
                 H    K G +N+     S+++MYF  G    A  VF  +  KD+   N ++  Y
Sbjct: 134 RMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGY 193

Query: 236 NKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
            K G +  A  VF  L   S FEP++ +  +V+  C E   +E G+ + G  V+ G+   
Sbjct: 194 AKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVN 253

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
             +G+A+++MY K G    + R+FD +  R+ I+W A IS Y ++G   +AI+ F    +
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKE 313

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G+  +   L  V+  C+    L+LG Q+  +A   G   D+ + TAL+D+YAK G L+S
Sbjct: 314 NGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLES 373

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG--MEPDPVTFSRLLS 472
           A+ + +    K  A +NA++S          ++ + LF +    G    P+ +TF  LLS
Sbjct: 374 AQRVFNDMPRKNDASWNAMISALASH--GKAKEALSLFERMSDEGGSARPNDITFVSLLS 431

Query: 473 LSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DI 530
                  +  G R     S   G    +   + ++ + ++ G +  A+ + + + ++ D 
Sbjct: 432 ACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDN 491

Query: 531 VSWNAMLSA 539
           V+  A+ SA
Sbjct: 492 VTLGALHSA 500



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 165/348 (47%), Gaps = 6/348 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           ++++ +  H  + K G  ND    N+++ +Y +     VA+K+FD +  +  ++W SL+ 
Sbjct: 132 EIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLS 191

Query: 133 GYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           GY   G     + +   + R E  F  +E +   +L AC  L D   G  +  F ++ G 
Sbjct: 192 GYAKLGFAREAVEVFGRL-REESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGM 250

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + N ++G++LISMY   G    +  +F G+  +D    N  I  Y + G ++ A  +F  
Sbjct: 251 KVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHS 310

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  +  +PN  T T V+S C     ++ GKQ+   A   G+  +I V  A++ MY K G 
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGS 370

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS--CLATVI 368
            E A+R+F+ +  +N  SW A+IS     G   +A++ F    D G     +     +++
Sbjct: 371 LESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLL 430

Query: 369 DGCSVCSNLELGLQLHG-FAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
             C     ++ G +L    +   G +  +   + +VD+ ++ G L  A
Sbjct: 431 SACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEA 478



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 133/256 (51%), Gaps = 3/256 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+LG+ V  F+++ G + +++  + LI++Y+K   L  ++++FDGM  R  ITW + I
Sbjct: 233 GDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAI 292

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y  +G  +  + +   M  +    N+ T + +L AC+ +     G+Q+  +A   G +
Sbjct: 293 SAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQ 352

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +++FV T+LI MY   G    A+ VF  +  K+    N MI      G+++ A  +F  +
Sbjct: 353 HDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERM 412

Query: 252 LSS--DFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVGNAIVTMYGKH 308
                   PND TF +++S C     V+EG +L   ++  FG+V +I   + +V +  + 
Sbjct: 413 SDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRA 472

Query: 309 GMSEEAERMFDAISER 324
           G   EA  + + + E+
Sbjct: 473 GHLYEAWDVIEKMPEK 488


>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
          Length = 701

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 191/639 (29%), Positives = 330/639 (51%), Gaps = 17/639 (2%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           +L +G+AVH  +L+   + D F   +L+N+YAK   +  A + F  M VR+ ++WT+ I 
Sbjct: 76  ELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIA 135

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G++ D +  S + +  +M R+    N++T + IL AC+ +       QIH   +K+    
Sbjct: 136 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 195

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +  V  +LIS Y + G    +E VF        R +    +    +G S  +    V LL
Sbjct: 196 DCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFI----SGVSNHSLLRSVQLL 251

Query: 253 SSDF----EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
              F     PND  + +V S       +E G QLH  A+K G +  I VG+A+ TMY + 
Sbjct: 252 RRMFHQGLRPNDKCYASVFSSVNS---IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRC 308

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
              +++ ++F+ + ER+ +SWTA+++G+   GH  +A   F   +  G   D   L  ++
Sbjct: 309 DNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAIL 368

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
             C+    L  G ++HG  ++  Y     +    + +Y+K   +++AR + D    K   
Sbjct: 369 SACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQV 427

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +++++SG+      +E   + LF     A +  D    S +LSL A  A     + LH 
Sbjct: 428 MWSSMISGYATNGCGEE--AISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHG 485

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y+IK G  +D  V ++L+ +Y++ G++D + ++F  IS  D+V+W  ++  YA HG  + 
Sbjct: 486 YAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQN 545

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL +F+ M + G  PD + ++ VL AC  +GL E G   FN +   YG+ P L+H+ CMV
Sbjct: 546 ALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMV 605

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGR+GRL+EA   ++S P     ++W TL++  ++  ++        ++ +    D+G
Sbjct: 606 DLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLGRFVENKIRE-GNYDSG 664

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           SF  +SN+ A  G  +E A++R TM    ++KE G S +
Sbjct: 665 SFATLSNILANSGDWEEVARIRKTMKG--VNKEPGWSMV 701



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 236/485 (48%), Gaps = 22/485 (4%)

Query: 99  LINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR----SE 154
           +++L AK  RL  A ++F      SA+ W + + G + +G+     G+A +M+R      
Sbjct: 1   MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEG----GLAVEMFRDMVWGS 56

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAE 214
            + N  T S  L AC+  E+   G  +H   ++   E +VFVGTSL++MY   G    A 
Sbjct: 57  CEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAM 116

Query: 215 NVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENL 274
             F  +  ++V      I  + +  E   A  +   ++ +    N YT T+++  C +  
Sbjct: 117 REFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMS 176

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD---AISERNLISWTA 331
            V E  Q+HG+ +K  +  +  V  A+++ Y   G  E +E++F+    +S R++  W+A
Sbjct: 177 MVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSA 234

Query: 332 LISGYVRSGHG-GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
            ISG   S H   +++         G+  +  C A+V    S  +++E G QLH  AIK 
Sbjct: 235 FISGV--SNHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKE 289

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
           G++  + +G+AL  +Y++  +++ +  + +    +    + A+++GF         +  +
Sbjct: 290 GFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATH--GHSVEAFL 347

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
            F    L G +PD V+ + +LS      CL++G+ +H ++++  Y     + +  I+MY+
Sbjct: 348 TFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYS 406

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KC  +  A +IF     +D V W++M+S YA +G G+ A+ LF+ M       D      
Sbjct: 407 KCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSS 466

Query: 571 VLQAC 575
           +L  C
Sbjct: 467 ILSLC 471



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 212/447 (47%), Gaps = 18/447 (4%)

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           ++ +   SG  R+A  VF         C N  +    + GE  +A  +F  ++    EPN
Sbjct: 1   MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
            +T++  +S C     +  G+ +HGL ++     ++ VG ++V MY K G    A R F 
Sbjct: 61  SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            +  RN++SWT  I+G+V+      A+    E +  G+  +     +++  C+  S +  
Sbjct: 121 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 180

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
             Q+HG  +K     D  +  AL+  Y   G ++ +  +   F    T    +I S F+ 
Sbjct: 181 ASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV---FEEAGTVSNRSIWSAFIS 237

Query: 440 KIADDEEDVMVLFSQQRL-----AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
            +++      +L S Q L      G+ P+   ++ + S   S   +  G  LH+ +IK G
Sbjct: 238 GVSNHS----LLRSVQLLRRMFHQGLRPNDKCYASVFS---SVNSIEFGGQLHSSAIKEG 290

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
           +   ++VG+AL TMY++C ++  ++++F+ + +RD VSW AM++ +A HG    A L F 
Sbjct: 291 FIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFR 350

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
            M  +GF PD +S+  +L AC        G  +     ++YG    +    C + +  + 
Sbjct: 351 NMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFIND--CFISMYSKC 408

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVS 641
             +  A  + +++P  +  ++W +++S
Sbjct: 409 QGVQTARRIFDATP-RKDQVMWSSMIS 434


>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Vitis vinifera]
          Length = 607

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 171/547 (31%), Positives = 285/547 (52%), Gaps = 4/547 (0%)

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           + T+LI  YF  G   EA  +F  +  +DV     MI  Y        A+ VF  +++ +
Sbjct: 45  LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS-EEA 314
            +PN +T ++V+  C     +  G+ +HGLA+K G+   I V NA++ MY    +S ++A
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 164

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
             +F  I  +N +SWT LI+GY     G   +  F + L   +  +    +  +  C+  
Sbjct: 165 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSI 224

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
            +   G QLH    KHG+ S++ +  +++D+Y +      A       + +    +N ++
Sbjct: 225 GSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLI 284

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
           +G+      +  + + +FS     G  P+  TF+ +++  A+ A L  G+ +H   I+ G
Sbjct: 285 AGYERS---NPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRG 341

Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
              ++ + NALI MY+KCG+I  + Q+F G+S RD+VSW AM+  Y  HG G+ A+ LF+
Sbjct: 342 LDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFD 401

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           +M R G  PD +  + +L AC ++GL + G+  F  +   Y + P  E + C+VDLLGRA
Sbjct: 402 KMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRA 461

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           G++ EA  LI S PF     +W   +   K         LA+ R+LDL P  AG+++++S
Sbjct: 462 GKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLS 521

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
           N+YA  G   E A++R  M  +   KE G SW+E+ + ++ FV   +   + E IY  L+
Sbjct: 522 NIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLE 581

Query: 735 LLNDEMK 741
            L   MK
Sbjct: 582 NLIGHMK 588



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 189/364 (51%), Gaps = 3/364 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFN-RLDVAQKLFDGMLVR 122
           ++K   G   L  G+ VH   +K G     +  N L+++YA     +D A  +F G+ ++
Sbjct: 115 VLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLK 174

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + ++WT+LI GY    D    L +   M   E + N  + S+ + AC+ +    FGEQ+H
Sbjct: 175 NEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLH 234

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A   K GFE+N+ V  S++ MY    CF EA   F  +  +D+   N +I  Y ++  +E
Sbjct: 235 AAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTE 294

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            + +VF  + S  F PN +TFT++++ C     +  G+Q+HG  ++ G+   +++ NA++
Sbjct: 295 -SLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALI 353

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G   ++ ++F  +S R+L+SWTA++ GY   G+G +A+  F + +  GI  D  
Sbjct: 354 DMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRV 413

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDG 421
               ++  CS    ++ GL+     +    +S D  +   +VD+  + G ++ A  L++ 
Sbjct: 414 VFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIES 473

Query: 422 FSCK 425
              K
Sbjct: 474 MPFK 477



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 214/462 (46%), Gaps = 17/462 (3%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           A  LI  Y     +  A+ LFD M  R  + WT +I GY    ++     + C+M   E 
Sbjct: 46  ATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEEL 105

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC---FRE 212
             N  T S +L+AC  ++   +G  +H  AIK G +  ++V  +L+ MY  + C     +
Sbjct: 106 DPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMY--ATCCVSMDD 163

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VFRG+  K+      +I  Y    +      VF  +L  + E N ++F+  +  C  
Sbjct: 164 ACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTS 223

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
                 G+QLH    K G    + V N+I+ MY +     EA R F  +++R+LI+W  L
Sbjct: 224 IGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTL 283

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           I+GY RS +  +++  F      G   +     +++  C+  + L  G Q+HG  I+ G 
Sbjct: 284 IAGYERS-NPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGL 342

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
             ++ L  AL+D+Y+K G++  +  +  G S +    + A++ G+        E+ + LF
Sbjct: 343 DGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGY--GTHGYGEEAVELF 400

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG---YAADVIVGNALITMY 509
            +   +G+ PD V F  +LS + S A LV    L  + +  G    + D  +   ++ + 
Sbjct: 401 DKMVRSGIRPDRVVFMAILS-ACSHAGLV-DEGLRYFKLMVGDYNISPDQEIYGCVVDLL 458

Query: 510 AKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALH---GLGK 547
            + G ++ A+++ + +  + D   W   L A   H    LGK
Sbjct: 459 GRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGK 500



 Score = 45.4 bits (106), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%)

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
           ++   LI  Y   G I  A  +F  + +RD+V+W  M++ Y        A ++F EM  E
Sbjct: 44  VLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNE 103

Query: 560 GFAPDDISILGVLQAC 575
              P+  +I  VL+AC
Sbjct: 104 ELDPNAFTISSVLKAC 119


>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 168/502 (33%), Positives = 282/502 (56%), Gaps = 5/502 (0%)

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           +  H++  + + +  PN++TF  V   C     +   +  H    K G+  +    N++V
Sbjct: 100 LTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMV 159

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD-LGICCDS 361
           TMY + G +  A ++FD I+E++L+SW +L+SGY + G   +A+  F    +  G   D 
Sbjct: 160 TMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDE 219

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             L +V+  C    +LELG  + GF ++ G   +  +G+AL+ +Y+K G+L S+R + DG
Sbjct: 220 MSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDG 279

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              +    +NA +S + +    DE   + LF   +  G++P+ VT + +LS  AS   L 
Sbjct: 280 MPSRDFITWNAAISAYAQNGMADE--AISLFHSMKENGVDPNKVTLTAVLSACASIGALD 337

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ +  Y+   G   D+ V  ALI MYAKCGS++ A ++F  +  ++  SWNAM+SA A
Sbjct: 338 LGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALA 397

Query: 542 LHGLGKGALLLFEEMKREGFA--PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
            HG  K AL LFE M  EG +  P+DI+ + +L AC+++GL + G  LF+ +  ++GL P
Sbjct: 398 SHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVP 457

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            +EH++CMVDLL RAG L EA ++I   P     +    L S  +   N        + L
Sbjct: 458 KIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQML 517

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           L+L+P ++G++I+ S +Y    M D+AA++R  M +  ++K  GCSWIE+ ++L  F++ 
Sbjct: 518 LELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSG 577

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
                +S ++ + +DLL +E+K
Sbjct: 578 DGLTLDSIDVRNIIDLLYEELK 599



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 198/429 (46%), Gaps = 17/429 (3%)

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           F+ ML  +  TW           DY   L +   M       N  T   +  AC+ LE+ 
Sbjct: 84  FNIMLRATTTTW----------HDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEI 133

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
                 H    K G +N+     S+++MYF  G    A  VF  +  KD+   N ++  Y
Sbjct: 134 RMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGY 193

Query: 236 NKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
            K G +  A  VF  L   S FEP++ +  +V+  C E   +E G+ + G  V+ G+   
Sbjct: 194 AKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVN 253

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
             +G+A+++MY K G    + R+FD +  R+ I+W A IS Y ++G   +AI+ F    +
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKE 313

Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
            G+  +   L  V+  C+    L+LG Q+  +A   G   D+ + TAL+D+YAK G L+S
Sbjct: 314 NGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLES 373

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG--MEPDPVTFSRLLS 472
           A+ + +    K  A +NA++S          ++ + LF +    G    P+ +TF  LLS
Sbjct: 374 AQRVFNDMPRKNDASWNAMISALASH--GKAKEALSLFERMSDEGGSARPNDITFVSLLS 431

Query: 473 LSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DI 530
                  +  G R     S   G    +   + ++ + ++ G +  A+ + + + ++ D 
Sbjct: 432 ACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDN 491

Query: 531 VSWNAMLSA 539
           V+  A+ SA
Sbjct: 492 VTLGALHSA 500



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 165/348 (47%), Gaps = 6/348 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           ++++ +  H  + K G  ND    N+++ +Y +     VA+K+FD +  +  ++W SL+ 
Sbjct: 132 EIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLS 191

Query: 133 GYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           GY   G     + +   + R E  F  +E +   +L AC  L D   G  +  F ++ G 
Sbjct: 192 GYAKLGFAREAVEVFGRL-REESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGM 250

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + N ++G++LISMY   G    +  +F G+  +D    N  I  Y + G ++ A  +F  
Sbjct: 251 KVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHS 310

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  +  +PN  T T V+S C     ++ GKQ+   A   G+  +I V  A++ MY K G 
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGS 370

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS--CLATVI 368
            E A+R+F+ +  +N  SW A+IS     G   +A++ F    D G     +     +++
Sbjct: 371 LESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLL 430

Query: 369 DGCSVCSNLELGLQLHG-FAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
             C     ++ G +L    +   G +  +   + +VD+ ++ G L  A
Sbjct: 431 SACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEA 478



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 133/256 (51%), Gaps = 3/256 (1%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+LG+ V  F+++ G + +++  + LI++Y+K   L  ++++FDGM  R  ITW + I
Sbjct: 233 GDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAI 292

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             Y  +G  +  + +   M  +    N+ T + +L AC+ +     G+Q+  +A   G +
Sbjct: 293 SAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQ 352

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +++FV T+LI MY   G    A+ VF  +  K+    N MI      G+++ A  +F  +
Sbjct: 353 HDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERM 412

Query: 252 LSS--DFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVGNAIVTMYGKH 308
                   PND TF +++S C     V+EG +L   ++  FG+V +I   + +V +  + 
Sbjct: 413 SDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRA 472

Query: 309 GMSEEAERMFDAISER 324
           G   EA  + + + E+
Sbjct: 473 GHLYEAWDVIEKMPEK 488


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 192/683 (28%), Positives = 349/683 (51%), Gaps = 5/683 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +  +V+   G  D+  G  VH  ++K+G + ++   ++L +LY+K  +   A +LF  + 
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
               I+WT +I   +    +   L    +M ++    NE T   +L A S L    FG+ 
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLE-FGKT 245

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH+  I  G   NV + TSL+  Y       +A  V      +DV     ++  + +   
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           ++ A   F+ + S   +PN++T++ ++S+C     ++ GKQ+H   +K G      VGNA
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365

Query: 301 IVTMYGKHGMSE-EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           +V MY K   SE EA R+F A+   N++SWT LI G V  G         +E +   +  
Sbjct: 366 LVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           +   L+ V+  CS   ++   L++H + ++     ++ +G +LVD YA    +  A  ++
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVI 485

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                +    + ++++ F E      E  + + +     G+  D ++    +S SA+   
Sbjct: 486 RSMKRRDNITYTSLVTRFNE--LGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L  G+ LH YS+K+G++    V N+L+ MY+KCGS++ A ++F+ I+  D+VSWN ++S 
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
            A +G    AL  FEEM+ +   PD ++ L +L AC    L++ G+  F  +++IY + P
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            +EH+  +V +LGRAGRL EA  ++ +     + ++++TL+   +   N       + + 
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKG 723

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           L L P D   +IL++++Y   G  + A K R  M + RLSK+ G S +E+  K+H FV+ 
Sbjct: 724 LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSE 783

Query: 720 GKDH-PESEEIYSKLDLLNDEMK 741
                 ++  IY++++ + +E+K
Sbjct: 784 DVTRVDKTNGIYAEIESIKEEIK 806



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 294/620 (47%), Gaps = 22/620 (3%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S   ++G  +H  ++K G   +    NNL++LY K + +  A+KLFD M  R+   WT +
Sbjct: 36  SNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVM 95

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I  +    ++ S L +  +M  S    NE T S ++ +C+ L D  +G ++H   IK+GF
Sbjct: 96  ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E N  VG+SL  +Y   G F+EA  +F  L   D      MI     A +   A   +  
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE 215

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++ +   PN++TF  ++      LG+E GK +H   +  G+   + +  ++V  Y +   
Sbjct: 216 MVKAGVPPNEFTFVKLLGAS-SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK 274

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E+A R+ ++  E+++  WT+++SG+VR+    +A+  FLE   LG+  ++   + ++  
Sbjct: 275 MEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSL 334

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK--GGDLKSARMLLDGFSCKYTA 428
           CS   +L+ G Q+H   IK G+     +G ALVD+Y K    +++++R+     S    +
Sbjct: 335 CSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVS 394

Query: 429 EFNAILS----GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
               IL     GF+       +D   L  +     +EP+ VT S +L   +    + R  
Sbjct: 395 WTTLILGLVDHGFV-------QDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +HAY ++     +++VGN+L+  YA    +D A+ + + +  RD +++ ++++ +   G
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL--FNEIEQIYGLRPILE 602
             + AL +   M  +G   D +S+ G + A    G  E G  L  ++      G   +L 
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLL 660
               +VD+  + G L +A  +      +   + W  LVS   S    +S  S     R+ 
Sbjct: 568 ---SLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMK 623

Query: 661 DLEPKDAGSFILVSNMYAGQ 680
           + EP      IL+S    G+
Sbjct: 624 ETEPDSVTFLILLSACSNGR 643


>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
          Length = 667

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 188/619 (30%), Positives = 321/619 (51%), Gaps = 16/619 (2%)

Query: 99  LINLYAKFNRLDVAQKLFDGMLVRSAITWT-SLIKGYLDDGDYESVLGIACDMYRSEEKF 157
           L  +Y    R   A  L   M     ++++ SL++ Y   G +   L +    Y +   F
Sbjct: 51  LFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAV----YSAMRAF 106

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +  T     +AC+ L     G  +H  A+ +GF  + +V  +LISMY   G    AE VF
Sbjct: 107 DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVF 166

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +  + V   N +I    K G +E A  VF  + +     +  T  +V+  C +   + 
Sbjct: 167 GAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLN 226

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGY 336
            G+ +H L    G+   ++V NA++ MYGK    E+A R+FD    +++++SWTA+I  Y
Sbjct: 227 TGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAY 286

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ---LHGFAIKHGYL 393
           V +    +AI+   + L  G    +    T++   S C+++  G      H   I+ G  
Sbjct: 287 VLNDRAFEAISLGCQMLMSGAAWPNG--VTMVYLLSACASMPSGKHAKCTHALCIRLGLK 344

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAILSGFMEKIADDEEDVMVLF 452
           SD+ + TAL+D YA+ G +K  R+ L+  S  + AE +NA LSG+   ++  E+  + LF
Sbjct: 345 SDIAVETALIDAYARCGKMKLMRLTLERGS--WRAETWNAALSGY--TVSGREKKAIELF 400

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
            +     + PD  T + +L   A  A L  G+++H + +  G+     +   LI +Y+K 
Sbjct: 401 KRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKA 460

Query: 513 GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
           G +D A+ +F+ + ++D+V+W  +++ Y +HG  + A+LL++ M   G  P+ ++I  +L
Sbjct: 461 GDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLL 520

Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
            AC ++G+ + GI +F ++  ++GL P  EH++C+VD+LGRAGR+ EA  LI   PF  S
Sbjct: 521 YACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPS 580

Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
             +W  L+    L  N +F  +A+KRL  L+P++ GS++L+ N+YA      +   VR  
Sbjct: 581 TSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRM 640

Query: 693 MNDLRLSKEAGCSWIEIDS 711
           M +  L KE G S +E  S
Sbjct: 641 MVERGLLKEPGSSLVEARS 659



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 212/479 (44%), Gaps = 19/479 (3%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           + G+AVH   L +G   DT+  N LI++Y     +  A+ +F  M  R+ ++W ++I G 
Sbjct: 125 RHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGC 184

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           + +G  E  L +  +M       +  T   +L AC+  +D   G  +H      G  + V
Sbjct: 185 VKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYV 244

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            V  +LI MY       +A  VF    + KDV     MI  Y     +  A  +   +L 
Sbjct: 245 AVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLM 304

Query: 254 SDFE-PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           S    PN  T   ++S C      +  K  H L ++ G+  +I+V  A++  Y + G  +
Sbjct: 305 SGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMK 364

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
                 +  S R   +W A +SGY  SG   KAI  F   +   +  DS+ +A+++   +
Sbjct: 365 LMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYA 423

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             ++L+ G  +H F +  G+L    + T L+D+Y+K GDL +A  L      K    +  
Sbjct: 424 ESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTT 483

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-------RS 485
           I++G+   I       ++L+ +   +G +P+ VT + LL   +    +  G       R+
Sbjct: 484 IIAGY--GIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRN 541

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
           +H      G   +    + L+ M  + G I+ A ++ + +      S W A+L A  LH
Sbjct: 542 VH------GLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLH 594



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 170/352 (48%), Gaps = 6/352 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV-RSAITWTSLI 131
           DL  G+AVH  +   G  +     N LI++Y K   L+ A+++FD     +  ++WT++I
Sbjct: 224 DLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMI 283

Query: 132 KGY-LDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
             Y L+D  +E++  + C M  S   + N  T   +L AC+ +      +  HA  I+ G
Sbjct: 284 GAYVLNDRAFEAI-SLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLG 342

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
            ++++ V T+LI  Y   G  +         +++     N  +  Y  +G  + A  +F 
Sbjct: 343 LKSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFK 401

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +++    P+  T  +++    E+  ++EGK +H   +  G +R   +   ++ +Y K G
Sbjct: 402 RMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAG 461

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             + A  +F  + E+++++WT +I+GY   GH   AI  +   ++ G   ++  +AT++ 
Sbjct: 462 DLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLY 521

Query: 370 GCSVCSNLELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            CS    ++ G+++       HG + +    + LVD+  + G ++ A  L+ 
Sbjct: 522 ACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQ 573



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S DLK G+ +H FLL  G    T  A  LI++Y+K   LD A  LF  +  +  + WT++
Sbjct: 425 SADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTI 484

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           I GY   G   + + +   M  S  K N  T + +L ACS
Sbjct: 485 IAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACS 524


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 155/477 (32%), Positives = 275/477 (57%), Gaps = 6/477 (1%)

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           +Q+H   V  G ++++ + N ++  Y +H   ++A  +FD ++ R+  +W+ ++ G+ ++
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G        F E L  G+  D+  L  VI  C   ++L++G  +H   +KHG LSD  + 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            +LVD+YAK   ++ A+ L +    K    +  ++  + +  A +    +VLF + R  G
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYES---LVLFDRMREEG 196

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           + PD V    +++  A    + R R  + Y ++ G++ DVI+G A+I MYAKCGS++ A 
Sbjct: 197 VVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAR 256

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           ++F  + +++++SW+AM++AY  HG GK A+ LF  M      P+ ++ + +L AC ++G
Sbjct: 257 EVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAG 316

Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
           L E G+  FN + + + +RP ++H+ CMVDLLGRAGRL EA+ LI +    +   LW  L
Sbjct: 317 LIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSAL 376

Query: 640 VSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLS 699
           +   ++ +  + +  A+  LL+L+P++ G ++L+SN+YA  G  ++ AK R  M   +L 
Sbjct: 377 LGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLK 436

Query: 700 KEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSSAFELQD 754
           K  G +WIE+D+K + F    + HP+S+EIY  L  L  ++++   V D+  F LQD
Sbjct: 437 KIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTD-FVLQD 492



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 165/360 (45%), Gaps = 2/360 (0%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + VHA ++ +G+  D   AN L+  YA+   +D A  LFDG+ +R + TW+ ++ G+   
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           GD+        ++ R     + +T   ++  C    D   G  IH   +K G  ++ FV 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            SL+ MY       +A+ +F  +  KD+     MI  Y      E +  +F  +      
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE-SLVLFDRMREEGVV 198

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+      V++ C +   +   +  +   V+ G   ++ +G A++ MY K G  E A  +
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD + E+N+ISW+A+I+ Y   G G  AI+ F   L   I  +     +++  CS    +
Sbjct: 259 FDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLI 318

Query: 378 ELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           E GL+  +    +H    DV+  T +VD+  + G L  A  L++  + +      + L G
Sbjct: 319 EEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLG 378



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 183/367 (49%), Gaps = 5/367 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            Q+HA  + +G   ++ +   L+  Y       +A ++F GL  +D +  + M+  + KA
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G+    +  F  LL     P++YT   VI  C +   ++ G+ +H + +K G++ +  V 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            ++V MY K  + E+A+R+F+ +  ++L++WT +I  Y    +  +++  F    + G+ 
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVV 198

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D   + TV++ C+    +      + + +++G+  DV LGTA++D+YAK G ++SAR +
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D    K    ++A+++ +        +D + LF       + P+ VTF  LL   +   
Sbjct: 259 FDRMKEKNVISWSAMIAAY--GYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAG 316

Query: 479 CLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAM 536
            +  G R  ++   +     DV     ++ +  + G +D A ++ + ++ ++D   W+A+
Sbjct: 317 LIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSAL 376

Query: 537 LSAYALH 543
           L A  +H
Sbjct: 377 LGACRIH 383



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 148/297 (49%), Gaps = 8/297 (2%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P +++      DL++G+ +H  +LK G  +D F   +L+++YAK   ++ AQ+LF+ ML 
Sbjct: 105 PFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLS 164

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV-ILEACSLLEDRIFGEQ 180
           +  +TWT +I  Y D   YES+  +  D  R E    +    V ++ AC+ L        
Sbjct: 165 KDLVTWTVMIGAYADCNAYESL--VLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARF 222

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
            + + +++GF  +V +GT++I MY   G    A  VF  +  K+V   + MI  Y   G 
Sbjct: 223 ANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGR 282

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGN 299
            + A  +F  +LS    PN  TF +++  C     +EEG +  + +  +  V  ++    
Sbjct: 283 GKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYT 342

Query: 300 AIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG---YVRSGHGGKAINGFLEF 352
            +V + G+ G  +EA R+ +A++ E++   W+AL+     + +     KA N  LE 
Sbjct: 343 CMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLEL 399



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 3/210 (1%)

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           + ID    C N+    Q+H   + +G L D+ +   L+  YA+   +  A  L DG + +
Sbjct: 5   SCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMR 64

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
            +  ++ ++ GF +  A D       F +    G+ PD  T   ++     +  L  GR 
Sbjct: 65  DSKTWSVMVGGFAK--AGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRV 122

Query: 486 LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
           +H   +K G  +D  V  +L+ MYAKC  ++ A ++F+ +  +D+V+W  M+ AYA    
Sbjct: 123 IHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCN 181

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQAC 575
              +L+LF+ M+ EG  PD ++++ V+ AC
Sbjct: 182 AYESLVLFDRMREEGVVPDKVAMVTVVNAC 211


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 194/652 (29%), Positives = 337/652 (51%), Gaps = 32/652 (4%)

Query: 93  TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
           T +    I+ + +    D+A  +FD M +R+++++ ++I GYL +  +     +A D++ 
Sbjct: 33  TVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKF----SLARDLFD 88

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
                +  + +++L   +   +R   +    F   S  E +V    +++S Y  SG   E
Sbjct: 89  KMPHKDLFSWNLMLTGYA--RNRRLRDARMLF--DSMPEKDVVSWNAMLSGYVRSGHVDE 144

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A +VF  + +K+    N ++  Y ++G  E A  +F     SD+E        +IS C  
Sbjct: 145 ARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFES--KSDWE--------LIS-CNC 193

Query: 273 NLGVEEGKQLHGLAVKFG---VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
            +G    + + G A +      VR++   N +++ Y + G   +A R+F+    R++ +W
Sbjct: 194 LMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTW 253

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           TA++  YV+ G   +A   F E               +I G +    +++G +L     +
Sbjct: 254 TAMVYAYVQDGMLDEARRVFDEMPQK----REMSYNVMIAGYAQYKRMDMGREL----FE 305

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
                ++     ++  Y + GDL  AR L D    + +  + AI++G+ +      E+ M
Sbjct: 306 EMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGL--YEEAM 363

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
            +  + +  G   +  TF   LS  A  A L  G+ +H   ++TGY    +VGNAL+ MY
Sbjct: 364 NMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMY 423

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
            KCG ID A+ +F+G+  +DIVSWN ML+ YA HG G+ AL +FE M   G  PD+I+++
Sbjct: 424 CKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMV 483

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
           GVL AC ++GL++ G   F+ + + YG+ P  +H+ACM+DLLGRAG L EA NLI + PF
Sbjct: 484 GVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPF 543

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
                 W  L+  S++  N +    A++ +  +EP ++G ++L+SN+YA  G   + +K+
Sbjct: 544 EPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKM 603

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           R  M  + + K  G SW+E+ +K+H F      HPE   IY+ L+ L+ +MK
Sbjct: 604 RLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMK 655



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 125/569 (21%), Positives = 242/569 (42%), Gaps = 49/569 (8%)

Query: 2   HTLLPANLLQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDW 61
           H   P N  +P F+   ++   K    I+T   N    +A LC   ++     ++ +N  
Sbjct: 16  HVQRPTNYPKPHFEDPHTVKCTK---AISTHMRNGHCDLA-LCVFDAMPL-RNSVSYN-- 68

Query: 62  PQLVKISIGSGDLKLGQ-AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
                 ++ SG L+  + ++   L       D F  N ++  YA+  RL  A+ LFD M 
Sbjct: 69  ------AMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMP 122

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDM-YRSEEKFNEHTCSVIL-----EACSLLED 174
            +  ++W +++ GY+  G  +    +   M +++   +N    + +      EA  L E 
Sbjct: 123 EKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFES 182

Query: 175 RIFGEQIHAFAIKSGFENNVFVG-----------------TSLISMYFHSGCFREAENVF 217
           +   E I    +  G+     +G                  ++IS Y   G   +A  +F
Sbjct: 183 KSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLF 242

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
                +DV     M+  Y + G  + A  VF  +     +  + ++  +I+   +   ++
Sbjct: 243 EESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP----QKREMSYNVMIAGYAQYKRMD 298

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
            G++L     +      I   N +++ Y ++G   +A  +FD + +R+ +SW A+I+GY 
Sbjct: 299 MGREL----FEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYA 354

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
           ++G   +A+N  +E    G   + S     +  C+  + LELG Q+HG  ++ GY     
Sbjct: 355 QNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCL 414

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +G ALV +Y K G +  A  +  G   K    +N +L+G+       +   + +F     
Sbjct: 415 VGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQ--ALTVFESMIT 472

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           AG++PD +T   +LS  +      RG    H+ +   G   +      +I +  + G ++
Sbjct: 473 AGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLE 532

Query: 517 GAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
            A  + + +  + D  +W A+L A  +HG
Sbjct: 533 EAQNLIRNMPFEPDAATWGALLGASRIHG 561


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 191/693 (27%), Positives = 348/693 (50%), Gaps = 32/693 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAK-------------FNRLDVAQKLFDGML 120
           LKLG+A+H  +L+S   +     N+L+N+Y+              FN  D+ +++FD M 
Sbjct: 120 LKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMR 179

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV----ILEACSLLEDRI 176
            R+ + W ++I  Y+        L  A  M+R+  +       V    +  A   + D  
Sbjct: 180 KRNVVAWNTMISWYVKT----ERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYD 235

Query: 177 FGEQIHAFAIKSG--FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
               ++   +K G  + ++ FV +S I MY   GC   A  +F     ++    N MI  
Sbjct: 236 NANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295

Query: 235 YNKAGESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
           Y +      A  +FV ++ S+ F  +D TF + ++   +   ++ G+QLH   +K   + 
Sbjct: 296 YVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTIL 355

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
           ++ + NAI+ MY + G    + ++F  + ER++++W  ++S +V++G   + +    E  
Sbjct: 356 QVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQ 415

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
             G   DS  L  ++   S   + E+G Q H + I+HG   +   G  L+D+YAK G + 
Sbjct: 416 KQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGY-LIDMYAKSGLIT 474

Query: 414 SARMLLDGFSC--KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           +A+ L +  S   +  A +NA+++G+ +    +E     +F +     + P+ VT + +L
Sbjct: 475 TAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEG--FAVFRKMIEQNVRPNAVTLASIL 532

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
                   +  G+ +H ++I+     +V VG AL+ MY+K G+I  A  +F    +++ V
Sbjct: 533 PACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSV 592

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
           ++  M+ +Y  HG+G+ AL LF  M   G  PD ++ + +L AC Y+GL + G+ +F  +
Sbjct: 593 TYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSM 652

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS-SPFSESPLLWRTLVSVSKLMANSK 650
           E+ Y ++P  EH+ C+ D+LGR GR+ EA   +        +  +W +L+   ++    +
Sbjct: 653 EREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFE 712

Query: 651 FSILASKRLLDLEPKD--AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
              + + +LL++E      G  +L+SN+YA +G  D   +VR  M    L KEAGCSW+E
Sbjct: 713 LGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVE 772

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +   ++ F++    HP+  EIY  L+ L  EMK
Sbjct: 773 VAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMK 805



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 155/610 (25%), Positives = 284/610 (46%), Gaps = 41/610 (6%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYL-DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
           A  LFD +   + + W ++I G++ ++   +++L  A        KF+ +T S  L+AC+
Sbjct: 56  ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115

Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE---------------AEN 215
                  G+ +H   ++S F ++  V  SL++MY  S C  E                  
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMY--STCLTEVPYLGTAYDFNNCDLVRR 173

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +  ++V   N MI  Y K      AF +F  ++     P   +F NV    +    
Sbjct: 174 VFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMND 233

Query: 276 VEEGKQLHGLAVKFG--VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
            +    L+GL VK G   V +  V ++ + MY + G  + A  +FD   ERN   W  +I
Sbjct: 234 YDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMI 293

Query: 334 SGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
            GYV++    +AI+ F++ ++      D     + +   S    L+LG QLH + +K   
Sbjct: 294 GGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSST 353

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
           +  V +  A++ +Y++ G + ++  +      +    +N ++S F++   DD E +M++F
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDD-EGLMLVF 412

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKC 512
             Q+  G   D VT + LLSL+++      G+  HAY I+ G   + + G  LI MYAK 
Sbjct: 413 EMQK-QGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDG-YLIDMYAKS 470

Query: 513 GSIDGAFQIFKGIS--DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           G I  A Q+F+  S  DRD  +WNAM++ Y  +GL +    +F +M  +   P+ +++  
Sbjct: 471 GLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLAS 530

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYG--LRPILEHF----ACMVDLLGRAGRLSEAMNLI 624
           +L AC   G    G       +QI+G  +R  L         ++D+  ++G ++ A N+ 
Sbjct: 531 ILPACNPMGTIGLG-------KQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVF 583

Query: 625 NSSPFSESPLLWRTLVSVSKL-MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGML 683
             +    S      ++S  +  M     S+  +     ++P D+ +F+ + +  +  G++
Sbjct: 584 AETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKP-DSVTFVAILSACSYAGLV 642

Query: 684 DEAAKVRTTM 693
           DE  ++  +M
Sbjct: 643 DEGLRIFQSM 652



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 120/288 (41%), Gaps = 25/288 (8%)

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC----DSS 362
           + G   +A  +FD+I     + W  +I G++ +      I+  L +  +        DS 
Sbjct: 49  RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICN---NMPIDALLFYARMRASPSPKFDSY 105

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG------------- 409
             ++ +  C+   +L+LG  LH   ++  + S   +  +L+++Y+               
Sbjct: 106 TFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDF 165

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
            +    R + D    +    +N ++S +++   +   +   +F      G+ P PV+F  
Sbjct: 166 NNCDLVRRVFDTMRKRNVVAWNTMISWYVK--TERLIEAFKMFRTMMRMGIRPTPVSFVN 223

Query: 470 LLSLSASQACLVRGRSLHAYSIKTG--YAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
           +               L+   +K G  Y  D  V ++ I MYA+ G +D A +IF    +
Sbjct: 224 VFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLE 283

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLF-EEMKREGFAPDDISILGVLQA 574
           R+   WN M+  Y  +     A+ LF + M+ E F  DD++ L  L A
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTA 331



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G + LG+ +H F ++     + F    L+++Y+K   +  A+ +F   L ++++T+T++I
Sbjct: 539 GTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMI 598

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFAI 186
             Y   G  E  L +   M  S  K +  T   IL ACS   L+++  RIF      + I
Sbjct: 599 LSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKI 658

Query: 187 KSGFEN 192
           +   E+
Sbjct: 659 QPSSEH 664


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/528 (32%), Positives = 285/528 (53%), Gaps = 12/528 (2%)

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           DV   N +I E  + G+S  +   F  +   D +PN  TF   I  C     +  GKQ H
Sbjct: 46  DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
             A+ FG   ++ V +A++ MY K G    A  +FD I  RN+++WT+LI+GYV++    
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165

Query: 344 KAINGFLEFL---------DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           +A+  F EFL         ++G   DS  + +V+  CS  SN  +   +HG AIK G   
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDK 225

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK-IADDEEDVMVLFS 453
            + +   L+D YAK G++  +R + D  + K    +N++++ + +  ++ D  +V     
Sbjct: 226 VMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEV--FHG 283

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
             +  G + + VT S LL   A +  L  G  LH   IK GY  +VI+  ++I MY KCG
Sbjct: 284 MLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCG 343

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
             + A   F G+ ++++ SW AM++ Y +HG  + AL +F +M   G  P+ I+ + VL 
Sbjct: 344 QAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLA 403

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC ++G  E G   FN +   Y + P +EH+ CMVDLLGRAG + EA NLI S       
Sbjct: 404 ACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDF 463

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           +LW +L++  ++  + + + ++++ L  L+P + G ++L++N+YA  G   +  ++R  +
Sbjct: 464 VLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILV 523

Query: 694 NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            D  L K  G S +E+  ++H F+   K+HP+ E+IY  L+ L+ +++
Sbjct: 524 KDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQ 571



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 219/463 (47%), Gaps = 34/463 (7%)

Query: 97  NNLINLYAK-FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
            NL  L+ K F+R DV              +W SLI      GD    L     M + + 
Sbjct: 32  TNLTTLFNKYFDRTDV-------------YSWNSLIAELARGGDSCESLRAFSWMRKLDI 78

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           K N  T    +++CS L D   G+Q H  A+  GFE+++FV ++LI MY   G    A  
Sbjct: 79  KPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARV 138

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN---------DYTFTNV 266
           +F  +  +++     +I  Y +  ++  A  VF   L    E N              +V
Sbjct: 139 LFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISV 198

Query: 267 ISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           +S C    N  V EG  +HG+A+K G+ + + V N ++  Y K G    + ++FD ++E+
Sbjct: 199 LSACSRVSNKAVSEG--VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEK 256

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQL 383
           +++SW ++I+ Y ++G    A   F   L  G    +   L+T++  C+    L +G+ L
Sbjct: 257 DVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCL 316

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKIA 442
           H   IK GY+++V + T+++D+Y K G  + AR   DG   K    + A+++G+ M   A
Sbjct: 317 HDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFA 376

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKTGYAADVIV 501
            +  DV   F Q   AG++P+ +TF  +L+  +    L  G R  +A S +      V  
Sbjct: 377 REALDV---FYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH 433

Query: 502 GNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
              ++ +  + G I  A+ + K +   RD V W ++L+A  +H
Sbjct: 434 YGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIH 476



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 200/415 (48%), Gaps = 22/415 (5%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL  G+  H   L  G ++D F ++ LI++Y+K  +L  A+ LFD +  R+ +TWTSLI 
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 133 GYLDDGDYESVLGIACDMY--RSEEKFNEHTCSV-------ILEACSLLEDRIFGEQIHA 183
           GY+ + D    L +  +    +SE    E   SV       +L ACS + ++   E +H 
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK G +  + V  +L+  Y   G    +  VF  +A KDV   N MI  Y + G S  
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276

Query: 244 AFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           AF VF  +L +   + N+ T + ++  C     +  G  LH   +K G V  + +  +I+
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G +E A   FD + E+N+ SWTA+I+GY   G   +A++ F + +  G+  +  
Sbjct: 337 DMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYI 396

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT----ALVDIYAKGGDLKSARML 418
              +V+  CS    LE G +    A+ H Y  +V  G      +VD+  + G +K A  L
Sbjct: 397 TFISVLAACSHAGFLEEGWRWFN-AMSHEY--NVEPGVEHYGCMVDLLGRAGYIKEAYNL 453

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDV-MVLFSQQRLAGMEPDPVTFSRLLS 472
           +   S K   +F  +L G +       +DV +   S + L  ++P    +  LL+
Sbjct: 454 IK--SMKVRRDF--VLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLA 504



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 9/157 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L++G  +H  ++K G  N+   A ++I++Y K  + ++A+  FDGM  ++  +WT++I
Sbjct: 308 GALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMI 367

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFAI 186
            GY   G     L +   M  +  K N  T   +L ACS    LE+  R F    H + +
Sbjct: 368 AGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNV 427

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
           + G E+       ++ +   +G  +EA N+ + +  +
Sbjct: 428 EPGVEHY----GCMVDLLGRAGYIKEAYNLIKSMKVR 460


>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 196/649 (30%), Positives = 339/649 (52%), Gaps = 38/649 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSG---SQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           L++    +  L   + +H   + SG   S N     ++L   YA    + +A+KLFD + 
Sbjct: 85  LLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLS 144

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGE 179
             S   W ++IK Y+D G +   L +   M  S + + +++T  ++++ACS++     G 
Sbjct: 145 DPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGV 204

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            IH  A+ SGF +N+FV  SL++MY + G    A  VF  +  + V   N MI  + + G
Sbjct: 205 LIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNG 264

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             E A  VF  ++ +  EP+  T  + +  C     +E G ++H L  K  +  +I V N
Sbjct: 265 RPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRN 324

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GIC 358
           A+V MY + G  +EA  +F    E+++I+WT++I+GY+ +G+   A+      + L G+ 
Sbjct: 325 ALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSAL-ALCPAMQLDGVV 383

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            ++  LA+++  C+                            +L  +YAK   +  +  +
Sbjct: 384 PNAVTLASLLSACA----------------------------SLCYMYAKCNAVSYSFQV 415

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               S K T  +NA+LSG +    +   + + LF    +  +E +  TF+ ++   A  A
Sbjct: 416 FAKTSKKRTVPWNALLSGLIHN--ELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILA 473

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI--SDRDIVSWNAM 536
            L +  +LH+Y +++G+ + + V   LI MY+KCGS+D A +IF  I   ++DI+ W+ +
Sbjct: 474 DLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVL 533

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++ Y +HG G+ A+LLF +M   G  P++I+   VL AC + GL + G+ LF  + + Y 
Sbjct: 534 IAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYP 593

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
             P+  H+ C+VDLLGRAGRL EA +LI S PF ++  +W  L+    +  N +   +A+
Sbjct: 594 SSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAA 653

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
           +RL +LEP+  G++IL++N+YA  G   +A  VR  M+ + L K    S
Sbjct: 654 ERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQS 702



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/488 (22%), Positives = 223/488 (45%), Gaps = 36/488 (7%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K       L +G  +H   L SG  ++ F  N+L+ +Y    ++ +A+++F+ ML
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            RS ++W ++I G+  +G  E  L +   M  +  + +  T    L +C  L++   G +
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIK 306

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H    K+  +  + V  +L+ MY   G   EA  VF     KDV     MI  Y   G 
Sbjct: 307 VHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGN 366

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           ++ A  +   +      PN  T  +++S C                             +
Sbjct: 367 AKSALALCPAMQLDGVVPNAVTLASLLSAC----------------------------AS 398

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
           +  MY K      + ++F   S++  + W AL+SG + +    +A+  F   L   +  +
Sbjct: 399 LCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEAN 458

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            +   +VI   ++ ++L+  + LH + ++ G++S + + T L+D+Y+K G L  A  + D
Sbjct: 459 HATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFD 518

Query: 421 GFSCKY--TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
               K      ++ +++G+   +    E  ++LF+Q   +GM+P+ +TF+ +L   + + 
Sbjct: 519 EIPNKEKDIIVWSVLIAGY--GMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRG 576

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNA 535
            +  G +L  Y I+  Y +  +  +   ++ +  + G +D A+ + K +   ++   W A
Sbjct: 577 LVDDGLTLFKYMIEN-YPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGA 635

Query: 536 MLSAYALH 543
           +L A  +H
Sbjct: 636 LLGACLIH 643


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 200/685 (29%), Positives = 335/685 (48%), Gaps = 92/685 (13%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           + +   +N  I  + +  R+  A++LF  M  RS  T+ +++ GY  +G     L +A  
Sbjct: 35  EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGR----LPLAAS 90

Query: 150 MYRSEEKFNEHTCSVILEA----CSLLEDR-IFGEQIHAFAIKSGFENNVFVGT------ 198
           ++R+  + + ++ + +L A     SL + R +F E      ++     NV + +      
Sbjct: 91  LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDE----MPVRDSVTYNVMISSHANHGL 146

Query: 199 --------------------SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
                                +++ Y  +G   EA  +F      DV   N ++  Y + 
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 206

Query: 239 GESEMAFHVFVHLLSSDFEP-NDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREIS 296
           G+   A  +F      D  P  D    N++   Y   G + E ++L   A     VR++ 
Sbjct: 207 GKMSEARELF------DRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP----VRDVF 256

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
              A+V+ Y ++GM EEA R+FDA+ ERN +SW A+++ Y++     + ++   E  ++ 
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR----RMMDEAKELFNMM 312

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
            C + +   T++ G                                   YA+ G L+ A+
Sbjct: 313 PCRNVASWNTMLTG-----------------------------------YAQAGMLEEAK 337

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            + D    K    + A+L+ + +      E+ + LF +    G   +   F+ +LS  A 
Sbjct: 338 AVFDTMPQKDAVSWAAMLAAYSQ--GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCAD 395

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
            A L  G  LH   I+ GY     VGNAL+ MY KCG+++ A   F+ + +RD+VSWN M
Sbjct: 396 IAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 455

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           ++ YA HG GK AL +F+ M+     PDDI+++GVL AC +SGL E GI  F  +   +G
Sbjct: 456 IAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFG 515

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           +    EH+ CM+DLLGRAGRL+EA +L+   PF     +W  L+  S++  N +    A+
Sbjct: 516 VTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAA 575

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           +++ +LEP++AG ++L+SN+YA  G   +A K+R  M +  + K  G SWIE+ +K+H F
Sbjct: 576 EKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTF 635

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
            A    HPE E+IY+ L+ L+  MK
Sbjct: 636 SAGDCVHPEKEKIYAFLEDLDMRMK 660



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 171/369 (46%), Gaps = 15/369 (4%)

Query: 57  LFN---DWPQLVKISIGSGDLKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNRLDVA 112
           LFN   +W  +   ++ SG ++ G+   A  L       D    N +++ YA+   +  A
Sbjct: 184 LFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA 243

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL 172
           ++LFD   VR   TWT+++ GY  +G  E     A  ++ +  + N  + + ++ A   +
Sbjct: 244 RRLFDAAPVRDVFTWTAVVSGYAQNGMLEE----ARRVFDAMPERNAVSWNAMVAA--YI 297

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
           + R+  E    F +      NV    ++++ Y  +G   EA+ VF  +  KD      M+
Sbjct: 298 QRRMMDEAKELFNMMPC--RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             Y++ G SE    +F+ +       N   F  V+S C +   +E G QLHG  ++ G  
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
               VGNA++ MY K G  E+A   F+ + ER+++SW  +I+GY R G G +A+  F   
Sbjct: 416 VGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMM 475

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGG 410
                  D   L  V+  CS    +E G+  + +++ H  G  +     T ++D+  + G
Sbjct: 476 RTTSTKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHHDFGVTAKPEHYTCMIDLLGRAG 534

Query: 411 DLKSARMLL 419
            L  A  L+
Sbjct: 535 RLAEAHDLM 543


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 181/563 (32%), Positives = 294/563 (52%), Gaps = 3/563 (0%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +QIH   + SG ++N F+ T L++   + G    A  +F    Y DV   N +I  Y++ 
Sbjct: 73  DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRN 132

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
                   ++  +  +   P+ +TF  V+  C E L       +HG  +K+G   ++ V 
Sbjct: 133 NMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQ 192

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N +V +Y K G    A+ +FD +  R ++SWT++ISGY ++G   +A+  F +  + G+ 
Sbjct: 193 NGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVK 252

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D   L +++   +   +LE G  +HGF IK G   +  L  +L   YAK G +  A+  
Sbjct: 253 PDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSF 312

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            D         +NA++SG+ +      E+ + LF       ++PD VT    +  SA   
Sbjct: 313 FDQMKTTNVIMWNAMISGYAKN--GHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVG 370

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L   + +  Y  K+ Y +D+ V  +LI MYAKCGS++ A ++F   SD+D+V W+AM+ 
Sbjct: 371 SLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIM 430

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            Y LHG G  A+ L+  MK+ G  P+D++ +G+L AC +SGL + G  LF+ ++  + + 
Sbjct: 431 GYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKD-FEIV 489

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P  EH++C+VDLLGRAG L EA   I   P      +W  L+S  K+         A+ +
Sbjct: 490 PRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANK 549

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L  L+P + G ++ +SN+YA   + D  A VR  M +  L+K+ G S IEI+ KL  F  
Sbjct: 550 LFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHV 609

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
             K HP ++EI+ +L  L   +K
Sbjct: 610 GDKSHPMAKEIFDELQRLERRLK 632



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 198/397 (49%), Gaps = 10/397 (2%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           +H  L+ SG Q++ F    L+N  +   ++  A+KLFD         W ++I+ Y  +  
Sbjct: 75  IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNM 134

Query: 140 YESVLGIACDMYRSEEKFNEH----TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
           Y   +    +MYR       H    T   +L+AC+ L D      IH   IK GF ++VF
Sbjct: 135 YRDTV----EMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVF 190

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V   L+++Y   G    A+ VF GL ++ +     +I  Y + G++  A  +F  + ++ 
Sbjct: 191 VQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNG 250

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            +P+     +++    +   +E+G+ +HG  +K G+  E ++  ++   Y K G+   A+
Sbjct: 251 VKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAK 310

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
             FD +   N+I W A+ISGY ++GH  +A+N F   +   I  DS  + + +   +   
Sbjct: 311 SFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVG 370

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
           +LEL   +  +  K  Y SD+ + T+L+D+YAK G ++ AR + D  S K    ++A++ 
Sbjct: 371 SLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIM 430

Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           G+   +     + + L+   + AG+ P+ VTF  LL+
Sbjct: 431 GY--GLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLT 465



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 156/322 (48%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K      D  L   +H  ++K G  +D F  N L+ LYAK   + VA+ +FDG+  
Sbjct: 158 PYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYH 217

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R+ ++WTS+I GY  +G     L +   M  +  K +      IL A + ++D   G  I
Sbjct: 218 RTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSI 277

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H F IK G E+   +  SL + Y   G    A++ F  +   +V   N MI  Y K G +
Sbjct: 278 HGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHA 337

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           E A ++F +++S + +P+  T  + +    +   +E  + +     K     +I V  ++
Sbjct: 338 EEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSL 397

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K G  E A R+FD  S+++++ W+A+I GY   G G +AIN +      G+  + 
Sbjct: 398 IDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPND 457

Query: 362 SCLATVIDGCSVCSNLELGLQL 383
                ++  C+    ++ G +L
Sbjct: 458 VTFIGLLTACNHSGLVKEGWEL 479


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 161/501 (32%), Positives = 282/501 (56%), Gaps = 7/501 (1%)

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
            H   HL S +  P    +   I+ C ++  +++ +++HG         +  + N+++ +
Sbjct: 36  LHDLDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHL 95

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G   EA ++FD + +++++SWT+LI+GY ++    +AI      L      +    
Sbjct: 96  YCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTF 155

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           A+++      ++  +G Q+H  A+K  +  DV +G+AL+D+YA+ G +  A  + D    
Sbjct: 156 ASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS 215

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    +NA++SGF  K   D E  +++F++ +  G E    T+S + S  A    L +G+
Sbjct: 216 KNGVSWNALISGFARK--GDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGK 273

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            +HA+ +K+       VGN ++ MYAK GS+  A ++F+ + ++D+V+WN+ML+A+A +G
Sbjct: 274 WVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
           LGK A+  FEEM++ G   + I+ L +L AC + GL + G   F+ I++ Y L P +EH+
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHY 392

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
             +VDLLGRAG L+ A+  I   P   +  +W  L++  ++  N+K    A+  +  L+P
Sbjct: 393 VTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP 452

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
            D+G  +L+ N+YA  G  D AA+VR  M    + KE  CSW+EI + +H FVA+   HP
Sbjct: 453 DDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHP 512

Query: 725 ESEEIYSKLDLLNDEMKLKVK 745
            +EEIY     + DE+ +K++
Sbjct: 513 RAEEIYK----MWDEISMKIR 529



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 209/459 (45%), Gaps = 9/459 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S +L   + +H  L  S  + D F  N+LI+LY K   +  A K+FD M  +  ++WTSL
Sbjct: 64  SKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSL 123

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I GY  +      +G+   M +   K N  T + +L+A     D   G QIHA A+K  +
Sbjct: 124 IAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDW 183

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
             +V+VG++L+ MY   G    A  VF  L  K+    N +I  + + G+ E A  VF  
Sbjct: 184 HEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAE 243

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +  + FE   +T++++ S       +E+GK +H   VK        VGN ++ MY K G 
Sbjct: 244 MQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGS 303

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             +A ++F+ +  ++L++W ++++ + + G G +A++ F E    GI  +      ++  
Sbjct: 304 MIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTA 363

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           CS    ++ G        ++    ++     +VD+  + G L  A + +     + TA  
Sbjct: 364 CSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTA-- 421

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD----PVTFSRLLSLSASQACLVRGRS- 485
            A+    +      +   +  F+   +  ++PD    PV    + + +       R R  
Sbjct: 422 -AVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKM 480

Query: 486 LHAYSIKTGYAADVI-VGNALITMYAKCGSIDGAFQIFK 523
           + A  +K   A   + +GN++    A   +   A +I+K
Sbjct: 481 MKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYK 519



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 179/387 (46%), Gaps = 11/387 (2%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           + AC+  ++     +IH     S FE + F+  SLI +Y   G   EA  VF  +  KD+
Sbjct: 58  ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--YENLGVEEGKQLH 283
                +I  Y +      A  +   +L   F+PN +TF +++     Y + G+  G Q+H
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGI--GGQIH 175

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
            LAVK     ++ VG+A++ MY + G  + A  +FD +  +N +SW ALISG+ R G G 
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
            A+  F E    G        +++  G +    LE G  +H   +K        +G  ++
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTML 295

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D+YAK G +  AR + +    K    +N++L+ F +     E   +  F + R +G+  +
Sbjct: 296 DMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKE--AVSHFEEMRKSGIYLN 353

Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQ- 520
            +TF  +L+  +    +  G+  H + +   Y  +  + +   ++ +  + G ++ A   
Sbjct: 354 QITFLCILTACSHGGLVKEGK--HYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVF 411

Query: 521 IFKGISDRDIVSWNAMLSAYALHGLGK 547
           IFK   +     W A+L+A  +H   K
Sbjct: 412 IFKMPMEPTAAVWGALLAACRMHKNAK 438



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 1/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+K +    D  +G  +HA  +K     D +  + L+++YA+  ++D+A  +FD +  ++
Sbjct: 158 LLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKN 217

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            ++W +LI G+   GD E+ L +  +M R+  +    T S I    + +     G+ +HA
Sbjct: 218 GVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHA 277

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +KS  +   FVG +++ MY  SG   +A  VF  +  KD+   N M+  + + G  + 
Sbjct: 278 HMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKE 337

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A   F  +  S    N  TF  +++ C     V+EGK    +  ++ +  EI     +V 
Sbjct: 338 AVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVD 397

Query: 304 MYGKHGMSEEA-ERMFDAISERNLISWTALISG 335
           + G+ G+   A   +F    E     W AL++ 
Sbjct: 398 LLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430


>gi|242093006|ref|XP_002436993.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
 gi|241915216|gb|EER88360.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
          Length = 698

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 183/639 (28%), Positives = 322/639 (50%), Gaps = 11/639 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
            + H   +K G    TF  NNL++ Y   +    A++LFD M  R+ ++W+ +I G    
Sbjct: 46  HSAHGVAIKLGCIASTFLCNNLLHAYLSRSVPAHARRLFDEMSRRNLVSWSVVISGSARH 105

Query: 138 GDYESVLGIACDMYR-----SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G       +   M       S ++ +      ++  CS       G Q+HA   K G + 
Sbjct: 106 GVLAEAFALFSHMLHGAGQGSWDRPDSFMLGALVAGCSRARHVDAGVQVHACVAKFGVDE 165

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---LEYNKAGESEMAFHVFV 249
           +  V  +L+ MY   G    +   F     + V     MI   +    +G  + A  +F 
Sbjct: 166 DESVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYHDAAMLLFK 225

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +L+    P + TF+ ++ V      +  G Q+HG  +K G   + ++G+A++TMYG+ G
Sbjct: 226 KMLALKVWPTNVTFSCILKVFNTPDLLSVGMQIHGCLLKIGTEVDTALGSALMTMYGRCG 285

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             +E  R+   I   ++ S T+L+  Y R+G+  +AI  F E +   +  D S +  ++ 
Sbjct: 286 GVDEIARLACRI-RHDVFSRTSLLGAYARNGYNAEAIGVFKEMILTNMAIDQSAMTCLLQ 344

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS    L +  ++H +A+K  +  D  L  A++ +Y + GD  SA  + +    +    
Sbjct: 345 VCSSVGQLRMVREVHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDIIS 404

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           + A+L+ + +   D+E  V++ F +    G+       + +L   +  + L  G  +H+ 
Sbjct: 405 WTALLTCYAQNGLDEE--VLLFFREMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHSR 462

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           ++K G   D  V NAL+T+YA CGS+  A +IF  +S+RDIV+WNA+L++++ HG    A
Sbjct: 463 TVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGNEVAA 522

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           + LF+ M+ E   PDD + +G+L +C   GL + G   FNE++  Y L P + H+ CMVD
Sbjct: 523 IQLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVKEGCEYFNEMKAKYNLEPKMVHYTCMVD 582

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           L  RAGR  +AM+ I++ P+    +LW  L++  K+  N     +A+K++L++ P D  +
Sbjct: 583 LFARAGRFCDAMDFIDAMPYEPDQILWEALLASCKIHGNLGLGRIAAKKILEITPHDYSA 642

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
           +I +S+++A   M DE    RT  +  +  K+ G SWI+
Sbjct: 643 YITLSSIHASVDMWDEKCWNRTVFDTQQARKDTGRSWID 681



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 236/481 (49%), Gaps = 11/481 (2%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VHA + K G   D   A  L+++YAK   +D + + F     RS ++WTS+I   ++
Sbjct: 151 GVQVHACVAKFGVDEDESVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTSMIACLVN 210

Query: 137 DGD---YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
            G    +++ + +   M   +      T S IL+  +  +    G QIH   +K G E +
Sbjct: 211 QGSSGYHDAAMLLFKKMLALKVWPTNVTFSCILKVFNTPDLLSVGMQIHGCLLKIGTEVD 270

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
             +G++L++MY   G   E   +   + + DV     ++  Y + G +  A  VF  ++ 
Sbjct: 271 TALGSALMTMYGRCGGVDEIARLACRIRH-DVFSRTSLLGAYARNGYNAEAIGVFKEMIL 329

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
           ++   +    T ++ VC     +   +++H  A+K     +  + NAI+T+YG+ G +  
Sbjct: 330 TNMAIDQSAMTCLLQVCSSVGQLRMVREVHCYALKTFFKLDTLLLNAIITVYGRCGDTTS 389

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           AE +F+ + E+++ISWTAL++ Y ++G   + +  F E L  G+     C+ +V+  CS 
Sbjct: 390 AETVFNLMEEQDIISWTALLTCYAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACSR 449

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            SNL +GLQ+H   +K G   D  +  ALV +YA  G ++ A  + +  S +    +NA+
Sbjct: 450 TSNLAIGLQIHSRTVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTWNAL 509

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           L+ F +    +E   + LF   +   + PD  TF  LLS S S+  LV+    +   +K 
Sbjct: 510 LTSFSQH--GNEVAAIQLFDLMQEEEVCPDDYTFVGLLS-SCSRMGLVKEGCEYFNEMKA 566

Query: 494 GYAAD--VIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG-LGKGA 549
            Y  +  ++    ++ ++A+ G    A      +  + D + W A+L++  +HG LG G 
Sbjct: 567 KYNLEPKMVHYTCMVDLFARAGRFCDAMDFIDAMPYEPDQILWEALLASCKIHGNLGLGR 626

Query: 550 L 550
           +
Sbjct: 627 I 627



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/377 (23%), Positives = 172/377 (45%), Gaps = 8/377 (2%)

Query: 53  ERTLLFNDWPQLVKIS-----IGSGDL-KLGQAVHAFLLKSGSQNDTFEANNLINLYAKF 106
           ++ L    WP  V  S       + DL  +G  +H  LLK G++ DT   + L+ +Y + 
Sbjct: 225 KKMLALKVWPTNVTFSCILKVFNTPDLLSVGMQIHGCLLKIGTEVDTALGSALMTMYGRC 284

Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL 166
             +D   +L    +     + TSL+  Y  +G     +G+  +M  +    ++   + +L
Sbjct: 285 GGVDEIARL-ACRIRHDVFSRTSLLGAYARNGYNAEAIGVFKEMILTNMAIDQSAMTCLL 343

Query: 167 EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR 226
           + CS +       ++H +A+K+ F+ +  +  ++I++Y   G    AE VF  +  +D+ 
Sbjct: 344 QVCSSVGQLRMVREVHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDII 403

Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
               ++  Y + G  E     F  +L        +  T+V+  C     +  G Q+H   
Sbjct: 404 SWTALLTCYAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHSRT 463

Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI 346
           VK G+  + SV NA+VT+Y   G  + A ++F+++S R++++W AL++ + + G+   AI
Sbjct: 464 VKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGNEVAAI 523

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDI 405
             F    +  +C D      ++  CS    ++ G +  +    K+     +   T +VD+
Sbjct: 524 QLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVKEGCEYFNEMKAKYNLEPKMVHYTCMVDL 583

Query: 406 YAKGGDLKSARMLLDGF 422
           +A+ G    A   +D  
Sbjct: 584 FARAGRFCDAMDFIDAM 600



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 136/273 (49%), Gaps = 2/273 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+++    G L++ + VH + LK+  + DT   N +I +Y +      A+ +F+ M  + 
Sbjct: 342 LLQVCSSVGQLRMVREVHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQD 401

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+WT+L+  Y  +G  E VL    +M R          + +L ACS   +   G QIH+
Sbjct: 402 IISWTALLTCYAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHS 461

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
             +K G +++  V  +L+++Y + G  + A  +F  ++ +D+   N ++  +++ G    
Sbjct: 462 RTVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGNEVA 521

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIV 302
           A  +F  +   +  P+DYTF  ++S C     V+EG +  + +  K+ +  ++     +V
Sbjct: 522 AIQLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVKEGCEYFNEMKAKYNLEPKMVHYTCMV 581

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
            ++ + G   +A    DA+  E + I W AL++
Sbjct: 582 DLFARAGRFCDAMDFIDAMPYEPDQILWEALLA 614


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 203/701 (28%), Positives = 340/701 (48%), Gaps = 34/701 (4%)

Query: 50  SCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL 109
           S  ER ++   W  L+   +  G     + +   +   G + D    + L++ +A+   +
Sbjct: 243 SMQERDVV--SWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEI 300

Query: 110 DVAQKLFDGMLVR----SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
           D+A +  + M  R    +  +W  +I G + +G  E  L +   M    E  N  T + I
Sbjct: 301 DLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASI 360

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L AC+ L+    G+ IH  A K G   NV+V  S+I MY   G +  AE VF     K+ 
Sbjct: 361 LPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNT 420

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
              N MI  Y   G+ E A  +   +    ++P+  T+  ++S    N    +  +L   
Sbjct: 421 AMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSE 480

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
            V+ G+   +   N +++ + + G+S EA ++F  +                +S   G  
Sbjct: 481 MVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIM----------------QSPSDGCN 524

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL---GLQLHGFAIKHGYLSDVRLGTAL 402
            N   E L+L +  +     T+      C++L L   G ++HG+ +++G+  ++ + +AL
Sbjct: 525 PN---EVLNLSMRPNP---ITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSAL 578

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+YAK  D+ SA  +      + T  +NA+++G++       E+ + LF +    G++P
Sbjct: 579 VDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINN--KQPEEALKLFLEMLGEGLQP 636

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-AADVIVGNALITMYAKCGSIDGAFQI 521
             +TF  L       A +  GR LH Y+ K         + +ALI MYAKCGSI  A  +
Sbjct: 637 SSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSV 696

Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
           F    ++D+  WNAM+SA+++HG+ + A  +F +M+  G  PD I+ + +L AC   GL 
Sbjct: 697 FDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLV 756

Query: 582 EGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           E G   FN +E  YG+   LEH+ CMV +LG AG L EA++ I   P+     +W TL+ 
Sbjct: 757 EEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQ 816

Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
             ++ +N +    A+K L +LEP +A +++L+SN+Y   GM D A  +R+ M   +L   
Sbjct: 817 ACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTI 876

Query: 702 AGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
             CS++ + S    F      HPE EEI    D L  +M+L
Sbjct: 877 KECSYLTVGSHXCTFKGGESSHPELEEILETWDXLARKMEL 917



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 158/657 (24%), Positives = 276/657 (42%), Gaps = 102/657 (15%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K        ++G+ VH F+++   ++D F  N LI+ Y+    L  ++ +F  M  
Sbjct: 187 PTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQE 246

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R  ++WT+LI  Y+++G               E K   H   +         D +  + I
Sbjct: 247 RDVVSWTALISAYMEEG------------LXDEAKHIFHLMQL---------DGVKPDLI 285

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
              A+ SGF  N  +  +L ++          E   RGL    V   N +I    + G  
Sbjct: 286 SWSALLSGFARNGEIDLALETL---------EEMPERGLQ-PTVNSWNGIISGCVQNGYL 335

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           E A  +F  +L    +PN  T  +++  C     +  GK +H +A K G+V  + V  ++
Sbjct: 336 EDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSV 395

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K G  + AE++F     +N   W  +I+ YV  G    A+ G L  +        
Sbjct: 396 IDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDAL-GLLRSMQ------- 447

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD- 420
                                      K G+  DV     ++  +A+ G    A  LL  
Sbjct: 448 ---------------------------KDGWKPDVITYNTILSGHARNGLKTQAXELLSE 480

Query: 421 ----GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG----------MEPDPVT 466
               G      + FN ++SGF +     E   +    Q    G          M P+P+T
Sbjct: 481 MVQMGLKPNVVS-FNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPIT 539

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
            +  L   A      +G+ +H Y+++ G+  ++ V +AL+ MYAKC  +D A ++F  I 
Sbjct: 540 ITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRID 599

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-----IYSGLS 581
            R+ VSWNA+++ Y  +   + AL LF EM  EG  P  I+ + +  AC     I  G  
Sbjct: 600 GRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRG 659

Query: 582 EGGI---CLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
             G    C  +E++            + ++D+  + G + +A ++ +S    + P LW  
Sbjct: 660 LHGYAAKCQLDELKNAIX--------SALIDMYAKCGSILDAKSVFDSEVEKDVP-LWNA 710

Query: 639 LVSVSKL--MANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           ++S   +  MA + F++     LL + P D  +F+ + +  A  G+++E  K   +M
Sbjct: 711 MISAFSVHGMARNAFAVFXQMELLGIXP-DHITFVSLLSACARDGLVEEGWKYFNSM 766



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 211/472 (44%), Gaps = 49/472 (10%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIK-SGFENNVFVGTSLISMYF-HSGCFREAENVFRGLAY 222
           +L  CS L +     QIHA  +K +  +    +G  L+ +Y  +     +A  +   +  
Sbjct: 89  LLNRCSTLSEF---RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPN 145

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           + V     +I  Y ++ + +  F  F  ++     P+ Y    ++  C   L    GK +
Sbjct: 146 RTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMV 205

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           HG  ++  V  ++ VGNA++  Y   G    +  +F ++ ER+++SWTALIS Y+  G  
Sbjct: 206 HGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLX 265

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
            +A + F                               +QL G         D+   +AL
Sbjct: 266 DEAKHIFHL-----------------------------MQLDGVK------PDLISWSAL 290

Query: 403 VDIYAKGGDLKSARMLLDGFSCK----YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           +  +A+ G++  A   L+    +        +N I+SG ++      ED + +FS+    
Sbjct: 291 LSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQN--GYLEDALDMFSRMLWY 348

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
             +P+ +T + +L        L  G+++H  + K G   +V V  ++I MY+KCGS D A
Sbjct: 349 PEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYA 408

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F    +++   WN M++AY   G  + AL L   M+++G+ PD I+   +L     +
Sbjct: 409 EKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARN 468

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL--INSSP 628
           GL      L +E+ Q+ GL+P +  F  ++    ++G   EA+ +  I  SP
Sbjct: 469 GLKTQAXELLSEMVQM-GLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSP 519



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/485 (23%), Positives = 212/485 (43%), Gaps = 63/485 (12%)

Query: 97  NNLINLYAKFN-RLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           N L+ LY K    L+ A+KL D +  R+   + +LI+ Y     ++ +      M     
Sbjct: 120 NKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGM 179

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
             +++    IL+ACS +     G+ +H F I+   E++VFVG +LI  Y + G    + +
Sbjct: 180 LPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRS 239

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +  +DV     +I  Y + G  + A H+F HL+  D                    
Sbjct: 240 VFHSMQERDVVSWTALISAYMEEGLXDEAKHIF-HLMQLD-------------------- 278

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI----SWTA 331
                         GV  ++   +A+++ + ++G  + A    + + ER L     SW  
Sbjct: 279 --------------GVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNG 324

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           +ISG V++G+   A++ F   L      +   +A+++  C+    L LG  +H  A KHG
Sbjct: 325 IISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHG 384

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
            + +V +  +++D+Y+K G    A  +      K TA +N +++ ++ +     ED + L
Sbjct: 385 IVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNE--GKVEDALGL 442

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
               +  G +PD +T++ +LS  A      +   L +  ++ G   +V+  N LI+ + +
Sbjct: 443 LRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQ 502

Query: 512 CGSIDGAFQIFKGI-SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
            G    A ++F+ + S  D  + N +L+                        P+ I+I G
Sbjct: 503 SGLSYEALKVFRIMQSPSDGCNPNEVLNL--------------------SMRPNPITITG 542

Query: 571 VLQAC 575
            L AC
Sbjct: 543 ALPAC 547



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 18/268 (6%)

Query: 374 CSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKG-GDLKSARMLLDGFSCKYTAEFN 431
           CS L    Q+H   +K   L     +G  LV +Y K    L+ AR LLD    +    + 
Sbjct: 93  CSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYA 152

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRL---AGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
           A++  +      DE     LFS  RL    GM PD      +L   ++      G+ +H 
Sbjct: 153 ALIRSYCRSEQWDE-----LFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHG 207

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           + I+    +DV VGNALI  Y+ CG +  +  +F  + +RD+VSW A++SAY   GL   
Sbjct: 208 FVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDE 267

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           A  +F  M+ +G  PD IS   +L     +G  +  +    E+ +  GL+P +  +  ++
Sbjct: 268 AKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPE-RGLQPTVNSWNGII 326

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLW 636
               + G L +A+++        S +LW
Sbjct: 327 SGCVQNGYLEDALDMF-------SRMLW 347


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 191/644 (29%), Positives = 306/644 (47%), Gaps = 98/644 (15%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           D    N +I  YA   RL+ A+KLF    +RS ITW+SLI GY   G     L +  +M 
Sbjct: 71  DECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQ 130

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
              E+ N+ T   +L  CS+      G+QIHA AIK+ F++N FV T L+ MY    C  
Sbjct: 131 YEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCIL 190

Query: 212 EAENVFRGLAYKDVRCV-NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           EAE +F     K    +   M+  Y++ G+   A   F  +     E N +TF ++++ C
Sbjct: 191 EAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTAC 250

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
                   G Q+HG  V+ G    + VG+A+V MY K G    A RM + +   + +SW 
Sbjct: 251 GSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWN 310

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH 390
           ++I G VR G G +A++ F       +  D     ++++                     
Sbjct: 311 SMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVN--------------------- 349

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
                     ALVD+YAK G    A  + +  + K    + ++++G +       E+ + 
Sbjct: 350 ---------NALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN--GSYEEALR 398

Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
           LF + R+ G+ PD +  + +LS                            + N+L++MYA
Sbjct: 399 LFCEMRIMGIHPDQIVIAAVLS---------------------------ALDNSLVSMYA 431

Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           KCG I+ A ++F  +  +D+++W A++  YA +G G+                       
Sbjct: 432 KCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD---------------------- 469

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
                            F  +E++YG++P  EH+ACM+DLLGR+G+L EA  L+N     
Sbjct: 470 ----------------YFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQ 513

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
               +W+ L++  ++  N +    A+  L +LEPK+A  ++L+SN+Y+  G  +EAAK R
Sbjct: 514 PDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTR 573

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
             M    +SKE GCSWIE+ SK+H F++  + HP + EIYSK+D
Sbjct: 574 RLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVD 617



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 186/427 (43%), Gaps = 62/427 (14%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD-GM 119
           W  ++++      L+ G+ +HA  +K+   ++ F    L+++YAK   +  A+ LF+   
Sbjct: 141 WGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAP 200

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             R+ + WT+++ GY  +GD    +    DM     + N+ T   IL AC  +    FG 
Sbjct: 201 DKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGA 260

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           Q+H   ++SGF  NVFVG++L+ MY   G    A  +   +   D    N MI+   + G
Sbjct: 261 QVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQG 320

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             E A  +F  +     + +++T+ ++                              V N
Sbjct: 321 LGEEALSLFRIMHLRHMKIDEFTYPSL------------------------------VNN 350

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+V MY K G  + A  +F+ ++++++ISWT+L++G V +G   +A+  F E   +GI  
Sbjct: 351 ALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHP 410

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   +A V+                             L  +LV +YAK G ++ A  + 
Sbjct: 411 DQIVIAAVLSA---------------------------LDNSLVSMYAKCGCIEDANKVF 443

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    +    + A++ G+    A +        S + + G++P P  ++ ++ L      
Sbjct: 444 DSMEIQDVITWTALIVGY----AQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGK 499

Query: 480 LVRGRSL 486
           L+  + L
Sbjct: 500 LMEAKEL 506



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA--------------------- 541
           N +++  +KCG +D A ++F  + DRD  SWN M+ AYA                     
Sbjct: 45  NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104

Query: 542 ----------LHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNE 590
                      +G    AL LF EM+ EG  P+  +   VL+ C +Y  L +G     + 
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
           I+  +     +     +VD+  +   + EA  L   +P   + +LW  +V+
Sbjct: 165 IKTQFDSNAFV--VTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVT 213


>gi|224066771|ref|XP_002302207.1| predicted protein [Populus trichocarpa]
 gi|222843933|gb|EEE81480.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 192/652 (29%), Positives = 316/652 (48%), Gaps = 35/652 (5%)

Query: 45  SISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYA 104
           ++S +  S     ++ +  L ++   S  +   + V + LL +     TF  N  I+ Y 
Sbjct: 44  AVSILFASPDCFAYSLYAHLFQVCSSSLAIVEARKVESQLLGACPTPPTFLLNRAIDTYG 103

Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
           K   L+ A++LFD M  R   +W ++I+  L     E  L    DM++     NE T S 
Sbjct: 104 KCRCLEDAKELFDEMPQRDGGSWNAMIRACLQCVRPEKALSYFGDMHKQGVYANEVTFSS 163

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
            L AC  + +     QIH   +K GF  NV VG+SL+ +Y   G   E+  +F  +   +
Sbjct: 164 ALRACGDVLELCLSRQIHGLIVKYGFCGNVIVGSSLVDVYGKCGAMSESRRIFDEIENPN 223

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
               N ++  Y + G+   A  +F  +  +   P  YTF+N +  C +   V+EG Q+HG
Sbjct: 224 NVTWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPLSYTFSNALVACSDMRAVKEGMQIHG 283

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
           +A K     E  V ++++ MY K G  E A R+FD    R+LISWT+++S Y  SG   +
Sbjct: 284 VATKINFEEEEVVLSSLIDMYVKCGEIESARRVFDLPGSRDLISWTSMVSAYAMSGRMRE 343

Query: 345 AINGFLEFLDLGICCDSSCLATVI-------------------------------DGCSV 373
           A   F E  +  +   ++ LA  I                               + CS 
Sbjct: 344 ARELFDEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVCSG 403

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF-SCKYTAEFNA 432
            S++++G Q+HGF  +HG+LS+  +G AL+D+Y K G+L+SA +        + +  +N 
Sbjct: 404 LSDVDMGKQVHGFIYRHGWLSNTVIGNALLDMYCKCGNLRSAGVWFHQMKQSRDSVSWNV 463

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +L+ +  +     E  M +F + +    +P    F+ LL+  A+   L +G+ +H + I+
Sbjct: 464 LLTSYARR--QMSEQAMSIFREMQWE-TKPHKFIFATLLAACANTFALDQGKQIHGFMIR 520

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            GY  D ++  AL+ MY+KC  ++ A  +F+    RD+V WN+M+      G GK AL L
Sbjct: 521 NGYDIDTVIAGALLDMYSKCRCLEYALIVFREADKRDLVLWNSMILGCCHLGRGKLALRL 580

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F  M+ EG  PD+++  G+L AC+Y G  +     FN +   Y + P LEH+ C+++LL 
Sbjct: 581 FGFMEEEGTKPDNVTFQGILLACVYEGHVDLARQYFNSMSSKYCIIPRLEHYECIIELLS 640

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
           R G + E  N I   PF  +  +   +V   K     +    A+KRL +L P
Sbjct: 641 RYGCMKELENFIKDMPFDPTAPMLTRVVDACKEHQCWRLGEWAAKRLDELSP 692


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 190/656 (28%), Positives = 318/656 (48%), Gaps = 77/656 (11%)

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           GD E+ + + C   +SE      T S +L+ C+ L+    G+++H+    +    +  +G
Sbjct: 80  GDLENAMELICMCKKSE--LETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALG 137

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE----------------- 240
             L+S Y   G  +E   VF  +  K+V   NFM+ EY K G+                 
Sbjct: 138 LKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE 197

Query: 241 ---SEMAFHVFVHLLSSD----------FEPN------------------DYTFTNVISV 269
               E AF +F  L   D          +  N                  D     +ISV
Sbjct: 198 GKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISV 257

Query: 270 ---CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
              C  +  +  GK +H LA+K    R I+  N ++ MY K G  + A R+F+ + ERN+
Sbjct: 258 LVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           +SWT++I+GY R G    AI    +    G+  D   + +++  C+   +L+ G  +H +
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 377

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
              +   S++ +  AL+D+YAK G +++A  +      K    +N ++            
Sbjct: 378 IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------------ 425

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
                        ++PD  T + +L   AS + L RG+ +H Y ++ GY++D  V NAL+
Sbjct: 426 -----------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            +Y KCG +  A  +F  I  +D+VSW  M++ Y +HG G  A+  F EM+  G  PD++
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           S + +L AC +SGL E G   F  ++  + + P LEH+ACMVDLL R G LS+A   I +
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIET 594

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            P +    +W  L+   +   + + +   ++R+ +LEP+++G ++L++N+YA     +E 
Sbjct: 595 LPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEV 654

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA-SGKDHPESEEIYSKLDLLNDEMK 741
            ++R  +    L K  GCSWIEI  K++ FV+ +   HP S+ I S L  +  +MK
Sbjct: 655 KRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 27/361 (7%)

Query: 60  DWPQLVKISIG---SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           D   ++ + +G   SG L LG+AVH+  +KS  +     +N L+++Y+K   LD A ++F
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVF 309

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           + M  R+ ++WTS+I GY  DG  +  + +   M +   K +    + IL AC+      
Sbjct: 310 EKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLD 369

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+ +H +   +  E+N+FV  +L+ MY   G    A +VF  +  KD+   N MI E  
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE-- 427

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
                               +P+  T   V+  C     +E GK++HG  ++ G   +  
Sbjct: 428 -------------------LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRH 468

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V NA+V +Y K G+   A  +FD I  ++L+SWT +I+GY   G+G +AI  F E  D G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKS 414
           I  D     +++  CS    LE G +   + +K+ +  + +L     +VD+ ++ G+L  
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587

Query: 415 A 415
           A
Sbjct: 588 A 588



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 221/498 (44%), Gaps = 51/498 (10%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF---------------- 106
           +LV      GDLK G+ V      +  + + +  N +++ YAK                 
Sbjct: 139 KLVSFYATCGDLKEGRRV----FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEK 194

Query: 107 ----NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC 162
                R + A +LFD +  R  I+W S+I GY+ +G  E  LGI   M       +  T 
Sbjct: 195 GIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATI 254

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
             +L  C+       G+ +H+ AIKS FE  +    +L+ MY   G    A  VF  +  
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE 314

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           ++V     MI  Y + G S+ A  +   +     + +    T+++  C  +  ++ GK +
Sbjct: 315 RNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV 374

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H       +   + V NA++ MY K G  E A  +F  +  +++ISW  +I G ++    
Sbjct: 375 HDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-GELKP--- 430

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
                            DS  +A V+  C+  S LE G ++HG+ +++GY SD  +  AL
Sbjct: 431 -----------------DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANAL 473

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y K G L  AR+L D    K    +  +++G+      +E   +  F++ R AG+EP
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNE--AIATFNEMRDAGIEP 531

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQ 520
           D V+F  +L   +    L +G     Y +K  +  +  + +   ++ + ++ G++  A++
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590

Query: 521 IFKGIS-DRDIVSWNAML 537
             + +    D   W A+L
Sbjct: 591 FIETLPIAPDATIWGALL 608


>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
 gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
 gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 794

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 199/681 (29%), Positives = 346/681 (50%), Gaps = 10/681 (1%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDT---FEANNLINLYAKFNRLDVAQKLFDGM 119
           +L +  +    LK  + +HA +L +G+   T   +  NNLI++Y +   L+ A+K+FD M
Sbjct: 99  ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKM 158

Query: 120 LVRSAITWTSLIKGYLDDGDYES-VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
             R+ +++ +L   Y  + D+ S    +   M     K N  T + +++ C++LED + G
Sbjct: 159 PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMG 218

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +++  IK G+ +NV V TS++ MY   G    A  +F  +  +D    N MI+   K 
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            + E     F ++L S  +P  +T++ V++ C +      GK +H   +    + ++ + 
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           NA++ MY   G   EA  +F  I   NL+SW ++ISG   +G G +A+  +   L +   
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398

Query: 359 -CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D    +  I   +       G  LHG   K GY   V +GT L+ +Y K  + +SA+ 
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    +    +  ++ G   ++ + E  V       R      D  + S ++   +  
Sbjct: 459 VFDVMKERDVVLWTEMIVGH-SRLGNSELAVQFFIEMYREKN-RSDGFSLSSVIGACSDM 516

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L +G   H  +I+TG+   + V  AL+ MY K G  + A  IF   S+ D+  WN+ML
Sbjct: 517 AMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSML 576

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
            AY+ HG+ + AL  FE++   GF PD ++ L +L AC + G +  G  L+N++++  G+
Sbjct: 577 GAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGI 635

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILAS 656
           +   +H++CMV+L+ +AG + EA+ LI  SP   +   LWRTL+S      N +  + A+
Sbjct: 636 KAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAA 695

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           +++L L+P+D  + IL+SN+YA  G  ++ A++R  +  L  SK+ G SWIE+++     
Sbjct: 696 EQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQV 755

Query: 717 VASGKDHPESEEIYSKLDLLN 737
            +SG D    E +    D LN
Sbjct: 756 FSSG-DQSNPEVVSQAQDELN 775



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 251/539 (46%), Gaps = 16/539 (2%)

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL--IKGYLDDGD--YESVLGIACD 149
           +  NNLI++Y + + L+ A+K+FD M  R+ +T   L  +  Y+  G   +  ++ +   
Sbjct: 23  YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82

Query: 150 MYRSEEKFNEHTCSVI--LEACSLLEDRIFGEQIHAFAIKSG---FENNVFVGTSLISMY 204
                   NE   SV+     C  +       QIHA  + +G      + +   +LISMY
Sbjct: 83  QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE-SEMAFHVFVHLLSSDFEPNDYTF 263
              G   +A  VF  + +++V   N +   Y++  + +  AF +  H+     +PN  TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
           T+++ VC     V  G  L+   +K G    + V  +++ MY   G  E A R+FD ++ 
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           R+ ++W  +I G +++      +  F   L  G+       + V++GCS   +  LG  +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
           H   I    L+D+ L  AL+D+Y   GD++ A  +           +N+I+SG  E    
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN--G 380

Query: 444 DEEDVMVLFSQ-QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
             E  M+++ +  R++   PD  TFS  +S +A     V G+ LH    K GY   V VG
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
             L++MY K    + A ++F  + +RD+V W  M+  ++  G  + A+  F EM RE   
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500

Query: 563 PDDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            D  S+  V+ AC   + L +G +  F+ +    G   ++     +VD+ G+ G+   A
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQGEV--FHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA 557


>gi|147799187|emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 167/496 (33%), Positives = 270/496 (54%), Gaps = 3/496 (0%)

Query: 239 GESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           G+ EM F VF  L  S  ++ +  T T V++ C +       K +H L   +G  REI+V
Sbjct: 20  GDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITV 79

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           GNA++T Y + G      R+FD +SE+N+++WTA+ISG  +     +++  F +  D  +
Sbjct: 80  GNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPV 139

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +S    + +  CS    +  G Q+HG   K G   D+ + +AL+D+Y+K G L+ A  
Sbjct: 140 DPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWK 199

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +            IL G  +     EE+ + +F +    G+  DP   S +L +    
Sbjct: 200 IFESAEEVDEVSMTVILVGLAQN--GFEEESIQVFVKMVKNGVVIDPNMISAILGVFGID 257

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  G+ +H+  IK  + ++  V N LI MY+KCG +D + +IF  +  R+ VSWN+M+
Sbjct: 258 TSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMI 317

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           +A+A HG G  AL L+EEM+ EG  P D++ L +L AC + GL E G+     + + YG+
Sbjct: 318 AAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGI 377

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P +EH+AC+VD++GRAG L+EA   I   P     L+W+ L+    +  NS+    A+ 
Sbjct: 378 GPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAAN 437

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           +L    P+    +IL++N+Y+ +G   E A+    M D+ ++KE G SWIEI+ ++H FV
Sbjct: 438 QLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFV 497

Query: 718 ASGKDHPESEEIYSKL 733
              + HP +E IY  L
Sbjct: 498 VEDRMHPHAEIIYGVL 513



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 212/429 (49%), Gaps = 5/429 (1%)

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIF 177
           M ++  I+W S I G L +GD E    +   +Y S   +F++ T + +L AC   E    
Sbjct: 1   MPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYV 60

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
            + IH+     G+E  + VG +LI+ YF  GC      VF  ++ K+V     +I   ++
Sbjct: 61  SKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQ 120

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
               E +  +F  +     +PN  T+ + +  C     + EG+Q+HGL  K GV  ++ +
Sbjct: 121 GQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCI 180

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            +A++ MY K G  E+A ++F++  E + +S T ++ G  ++G   ++I  F++ +  G+
Sbjct: 181 ESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGV 240

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D + ++ ++    + ++L LG Q+H   IK  + S+  +   L+++Y+K GDL  +  
Sbjct: 241 VIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIK 300

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +      + +  +N++++ F      +    + L+ + RL G+ P  VTF  LL   A  
Sbjct: 301 IFCWMPQRNSVSWNSMIAAFARH--GNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHV 358

Query: 478 ACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD-IVSWNA 535
             + +G   L + +   G    +     ++ M  + G ++ A +  + + ++  I+ W A
Sbjct: 359 GLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQA 418

Query: 536 MLSAYALHG 544
           +L A ++HG
Sbjct: 419 LLGACSIHG 427



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/346 (22%), Positives = 155/346 (44%), Gaps = 1/346 (0%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           + + +H+ +   G + +    N LI  Y +       +++FD M  ++ +TWT++I G  
Sbjct: 60  VSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLS 119

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
               YE  L +   M       N  T    L ACS L+    G QIH    K G   ++ 
Sbjct: 120 QGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLC 179

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           + ++L+ MY   G   +A  +F      D   +  +++   + G  E +  VFV ++ + 
Sbjct: 180 IESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNG 239

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
              +    + ++ V   +  +  GKQ+H L +K        V N ++ MY K G  +++ 
Sbjct: 240 VVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSI 299

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
           ++F  + +RN +SW ++I+ + R G+G +A+  + E    G+        +++  C+   
Sbjct: 300 KIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVG 359

Query: 376 NLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
            +E G+  L   A  +G    +     +VD+  + G L  A+  ++
Sbjct: 360 LVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIE 405



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 2/262 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++ G+ +H  + K G   D    + L+++Y+K   L+ A K+F+       ++ T ++ G
Sbjct: 159 IREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVG 218

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
              +G  E  + +   M ++    + +  S IL    +      G+QIH+  IK  F +N
Sbjct: 219 LAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSN 278

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
            FV   LI+MY   G   ++  +F  +  ++    N MI  + + G    A  ++  +  
Sbjct: 279 YFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRL 338

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               P D TF +++  C     VE+G   L  +A  +G+   +     +V M G+ G+  
Sbjct: 339 EGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLN 398

Query: 313 EAERMFDAISER-NLISWTALI 333
           EA++  + + E+  ++ W AL+
Sbjct: 399 EAKKFIERLPEKPGILVWQALL 420


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 171/545 (31%), Positives = 301/545 (55%), Gaps = 6/545 (1%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N+     LI MY        A  VF  +  ++V   + ++  +   G+ + +  +F  + 
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                PN++TF+  +  C     +E+G Q+HG  +K G    + VGN++V MY K G   
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAIN--GFLEFLDLGICCDSSCLATVIDG 370
           EAE++F  I +R+LISW A+I+G+V +G+G KA++  G ++  ++    D   L +++  
Sbjct: 531 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590

Query: 371 CSVCSNLELGLQLHGFAIKHGY--LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           CS    +  G Q+HGF ++ G+   S   +  +LVD+Y K G L SAR   D    K   
Sbjct: 591 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 650

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +++++ G+ ++   +  + M LF + +    + D    S ++ + A  A L +G+ + A
Sbjct: 651 SWSSLILGYAQE--GEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQA 708

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            ++K     +  V N+++ MY KCG +D A + F  +  +D++SW  +++ Y  HGLGK 
Sbjct: 709 LAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 768

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           ++ +F EM R    PD++  L VL AC +SG+ + G  LF+++ + +G++P +EH+AC+V
Sbjct: 769 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 828

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           DLLGRAGRL EA +LI++ P   +  +W+TL+S+ ++  + +      K LL ++ K+  
Sbjct: 829 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA 888

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
           +++++SN+Y   G  +E    R   N   L KEAG SW+EI+ ++H F +    HP +  
Sbjct: 889 NYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPV 948

Query: 729 IYSKL 733
           I   L
Sbjct: 949 IQETL 953



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 226/468 (48%), Gaps = 13/468 (2%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           +N LI++Y K     +A K+FD M  R+ ++W++L+ G++ +GD +  L +  +M R   
Sbjct: 415 SNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI 474

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
             NE T S  L+AC LL     G QIH F +K GFE  V VG SL+ MY   G   EAE 
Sbjct: 475 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 534

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE--PNDYTFTNVISVCYEN 273
           VFR +  + +   N MI  +  AG    A   F  +  ++ +  P+++T T+++  C   
Sbjct: 535 VFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 594

Query: 274 LGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
             +  GKQ+HG  V+  F      ++  ++V +Y K G    A + FD I E+ +ISW++
Sbjct: 595 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSS 654

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
           LI GY + G   +A+  F    +L    DS  L+++I   +  + L  G Q+   A+K  
Sbjct: 655 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP 714

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
              +  +  ++VD+Y K G +  A         K    +  +++G+  K    ++ V + 
Sbjct: 715 SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGY-GKHGLGKKSVRIF 773

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYA 510
           +   R   +EPD V +  +LS  +    +  G  L +  ++T G    V     ++ +  
Sbjct: 774 YEMLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLG 832

Query: 511 KCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGK--GALLL 552
           + G +  A  +   +  +  V  W  +LS   +HG   LGK  G +LL
Sbjct: 833 RAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILL 880



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 185/357 (51%), Gaps = 5/357 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G  +H F LK G +      N+L+++Y+K  R++ A+K+F  ++ RS I+W ++I G
Sbjct: 494 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 553

Query: 134 YLDDGDYESVLGIACDMYRS--EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           ++  G     L     M  +  +E+ +E T + +L+ACS       G+QIH F ++SGF 
Sbjct: 554 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 613

Query: 192 --NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             ++  +  SL+ +Y   G    A   F  +  K +   + +IL Y + GE   A  +F 
Sbjct: 614 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 673

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            L   + + + +  +++I V  +   + +GKQ+  LAVK     E SV N++V MY K G
Sbjct: 674 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 733

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
           + +EAE+ F  +  +++ISWT +I+GY + G G K++  F E L   I  D  C   V+ 
Sbjct: 734 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 793

Query: 370 GCSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
            CS    ++ G +L    ++ HG    V     +VD+  + G LK A+ L+D    K
Sbjct: 794 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 850



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 8/277 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSG--SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           L+K    +G +  G+ +H FL++SG    +      +L++LY K   L  A+K FD +  
Sbjct: 587 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 646

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           ++ I+W+SLI GY  +G++   +G+   +     + +    S I+   +       G+Q+
Sbjct: 647 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 706

Query: 182 HAFAIK--SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            A A+K  SG E +V    S++ MY   G   EAE  F  +  KDV     +I  Y K G
Sbjct: 707 QALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHG 764

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVG 298
             + +  +F  +L  + EP++  +  V+S C  +  ++EG++L   L    G+   +   
Sbjct: 765 LGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHY 824

Query: 299 NAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
             +V + G+ G  +EA+ + D +  + N+  W  L+S
Sbjct: 825 ACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 861


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 198/684 (28%), Positives = 334/684 (48%), Gaps = 90/684 (13%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           + +   +N  I  + +  R+  A++LF  M  RS  T+ +++ GY  +G     L +A  
Sbjct: 35  EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGR----LPLAAS 90

Query: 150 MYRSEEKFNEHTCSVILEA----CSLLEDR-IFGEQIHAFAIKSGFENNVFVGT------ 198
           ++R+  + + ++ + +L A     SL + R +F E      ++     NV + +      
Sbjct: 91  LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDE----MPVRDSVTYNVMISSHANHGL 146

Query: 199 --------------------SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
                                +++ Y  +G   EA  +F      DV   N ++  Y + 
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 206

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISV 297
           G+   A  +F  +   D         N++   Y   G + E ++L   A     VR++  
Sbjct: 207 GKMSEARELFDRMPGRDV-----VSWNIMVSGYARRGDMVEARRLFDAAP----VRDVFT 257

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             A+V+ Y ++GM EEA R+FDA+ ERN +SW A+++ Y++     + ++   E  ++  
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR----RMMDEAKELFNMMP 313

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
           C + +   T++ G                                   YA+ G L+ A+ 
Sbjct: 314 CRNVASWNTMLTG-----------------------------------YAQAGMLEEAKA 338

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    + A+L+ + +      E+ + LF +    G   +   F+ +LS  A  
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQ--GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L  G  LH   I+ GY     VGNAL+ MY KCG+++ A   F+ + +RD+VSWN M+
Sbjct: 397 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 456

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + YA HG GK AL +F+ M+     PDDI+++GVL AC +SGL E GI  F  +   +G+
Sbjct: 457 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 516

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
               EH+ CM+DLLGRAGRL+EA +L+   PF     +W  L+  S++  N +    A++
Sbjct: 517 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 576

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           ++ +LEP++AG ++L+SN+YA  G   +A K+R  M +  + K  G SWIE+ +K+H F 
Sbjct: 577 KIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFS 636

Query: 718 ASGKDHPESEEIYSKLDLLNDEMK 741
           A    HPE E+IY+ L+ L+  MK
Sbjct: 637 AGDCVHPEKEKIYAFLEDLDMRMK 660



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 171/369 (46%), Gaps = 15/369 (4%)

Query: 57  LFN---DWPQLVKISIGSGDLKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNRLDVA 112
           LFN   +W  +   ++ SG ++ G+   A  L       D    N +++ YA+   +  A
Sbjct: 184 LFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA 243

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL 172
           ++LFD   VR   TWT+++ GY  +G  E     A  ++ +  + N  + + ++ A   +
Sbjct: 244 RRLFDAAPVRDVFTWTAVVSGYAQNGMLEE----ARRVFDAMPERNAVSWNAMVAA--YI 297

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
           + R+  E    F +      NV    ++++ Y  +G   EA+ VF  +  KD      M+
Sbjct: 298 QRRMMDEAKELFNMMPC--RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             Y++ G SE    +F+ +       N   F  V+S C +   +E G QLHG  ++ G  
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
               VGNA++ MY K G  E+A   F+ + ER+++SW  +I+GY R G G +A+  F   
Sbjct: 416 VGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMM 475

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGG 410
                  D   L  V+  CS    +E G+  + +++ H  G  +     T ++D+  + G
Sbjct: 476 RTTSTKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHHDFGVTAKPEHYTCMIDLLGRAG 534

Query: 411 DLKSARMLL 419
            L  A  L+
Sbjct: 535 RLAEAHDLM 543


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 208/637 (32%), Positives = 313/637 (49%), Gaps = 83/637 (13%)

Query: 198 TSLISMYFHSGCFREAENVFRG--LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           T+LI+ Y   G       +F G  L  +D    N MI  Y   G+   A  +F  +   D
Sbjct: 83  TTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD 142

Query: 256 FEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGV-VREISVGNAIVTMYGKHGMSE- 312
           F P+D+TFT+V+S     +G E+   Q+H   VK G+     SV NA++++Y K   SE 
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRA-SEL 201

Query: 313 --------EAERMFDAISERNLISWTALISGYVRSG--------------HGGKAING-- 348
                    A ++FD + +R+ ++WT +I+GYVR+               + G A N   
Sbjct: 202 GIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMI 261

Query: 349 --------FLEFLD-------LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK---- 389
                   F E L        LGI  D     T+I  C+   + ++G Q+H + +K    
Sbjct: 262 SGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELN 321

Query: 390 --HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-----MEKIA 442
             H +   V    AL+ +Y K   +  AR +      +    +NAILSG+     ME+  
Sbjct: 322 PNHSFCLSV--SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379

Query: 443 DDEEDVMV------------------------LFSQQRLAGMEPDPVTFSRLLSLSASQA 478
              E++ V                        LF Q RL G EP    F+  L+  +   
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLG 439

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L  GR LHA  +  GY + + VGNA+I+MYAKCG ++ A  +F  +   D+VSWN+M++
Sbjct: 440 ALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIA 499

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           A   HG G  A+ LF++M +EG  PD I+ L VL AC ++GL E G   FN + + YG+ 
Sbjct: 500 ALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGIT 559

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P  +H+A MVDL  RAG  S A  +I+S P      +W  L++  ++  N    I A+++
Sbjct: 560 PCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQ 619

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L  L P++ G+++L+SN+YA  G  ++ AKVR  M D  + KE  CSWIE+++K+H F+ 
Sbjct: 620 LFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMV 679

Query: 719 SGKDHPESEEIYSKLDLLNDEM-KLKVKDSSAFELQD 754
               HPE   +Y  L+ L  EM KL     + F L D
Sbjct: 680 DDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHD 716



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 176/390 (45%), Gaps = 37/390 (9%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           L     + D      +I  Y + + L+ A+++F+ M+      W ++I GY+  G ++  
Sbjct: 214 LFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEA 273

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN----VFVGTS 199
           L +   M     +F++ T + I+ AC+ +     G+Q+HA+ +K+    N    + V  +
Sbjct: 274 LTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNA 333

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA--------------- 244
           LI++Y  +    EA  +F  +  +++   N ++  Y  AG  E A               
Sbjct: 334 LITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTL 393

Query: 245 ----------------FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
                             +F  +    FEP D+ F   ++ C     +E G+QLH   V 
Sbjct: 394 TVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVH 453

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G    +SVGNA+++MY K G+ E AE +F  +   +L+SW ++I+   + GHG KAI  
Sbjct: 454 LGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIEL 513

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA-LVDIYA 407
           F + L  G+  D     TV+  CS    +E G       ++   ++      A +VD++ 
Sbjct: 514 FDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFC 573

Query: 408 KGGDLKSARMLLDGFSCKYTAE-FNAILSG 436
           + G    AR+++D    K  A  + A+L+G
Sbjct: 574 RAGMFSYARIVIDSMPSKPGAPVWEALLAG 603



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 123/542 (22%), Positives = 221/542 (40%), Gaps = 100/542 (18%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDG--MLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           D      LI  Y     L++ +++F+G  + +R ++ + ++I GY  +GD  S L +   
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 150 MYRSEEKFNEHTCSVILEACSLL--EDRIFGEQIHAFAIKSGF----------------- 190
           M R + + ++ T + +L A  L    ++  G Q+H   +K+G                  
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCG-QMHCAVVKTGMGCVSSSVLNALLSVYVK 196

Query: 191 -----------------------ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
                                  + +    T++I+ Y  +     A  VF  +       
Sbjct: 197 RASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAA 256

Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
            N MI  Y   G  + A  +   +     + +D T+T +IS C      + GKQ+H   +
Sbjct: 257 WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYIL 316

Query: 288 KFGVVRE----ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH-- 341
           K  +       +SV NA++T+Y K+   +EA ++F A+  RN+I+W A++SGYV +G   
Sbjct: 317 KNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRME 376

Query: 342 ---------------------GGKAINGFLE---------FLDLGICCDSSCLATVIDGC 371
                                 G A NGF +          LD    CD +  A  +  C
Sbjct: 377 EAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFA-FAGALTAC 435

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           SV   LE G QLH   +  GY S + +G A++ +YAK G +++A  +           +N
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-----L 486
           ++++   +         + LF Q    G+ PD +TF  +L+  +    + +GR      L
Sbjct: 496 SMIAALGQH--GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSML 553

Query: 487 HAYSI---KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYAL 542
            +Y I   +  YA        ++ ++ + G    A  +   +  +     W A+L+   +
Sbjct: 554 ESYGITPCEDHYA-------RMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606

Query: 543 HG 544
           HG
Sbjct: 607 HG 608



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 39/317 (12%)

Query: 58  FND--WPQLVKISIGSGDLKLGQAVHAFLLKSG-SQNDTF---EANNLINLYAKFNRLDV 111
           F+D  +  ++      G  ++G+ +HA++LK+  + N +F    +N LI LY K N++D 
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYES-------------------VLGIACDMYR 152
           A+K+F  M VR+ ITW +++ GY++ G  E                    + G+A + + 
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406

Query: 153 SE--EKFNE------HTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSL 200
            E  + F +        C       L ACS+L     G Q+HA  +  G+E+++ VG ++
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPND 260
           ISMY   G    AE+VF  +   D+   N MI    + G    A  +F  +L     P+ 
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDR 526

Query: 261 YTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
            TF  V++ C     VE+G+   + +   +G+         +V ++ + GM   A  + D
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586

Query: 320 AI-SERNLISWTALISG 335
           ++ S+     W AL++G
Sbjct: 587 SMPSKPGAPVWEALLAG 603



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
           +G +P     +RLL +    + +V  R L     +     D I    LIT Y   G+++ 
Sbjct: 42  SGFKPRGHFLNRLLEMYCKSSNVVYARQL----FEEIPNPDAIARTTLITAYCALGNLEL 97

Query: 518 AFQIFKG--ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             +IF G  +  RD V +NAM++ YA +G G  AL LF  M+R+ F PDD +   VL A 
Sbjct: 98  GREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSAL 157

Query: 576 I 576
           +
Sbjct: 158 V 158


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 157/495 (31%), Positives = 283/495 (57%), Gaps = 3/495 (0%)

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           +T   ++ +C +   +  GK  HGLA+ FG+V +    N ++ +Y K G ++ A R+FDA
Sbjct: 57  FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           +S R++ISW  +I+GY  +    +A+  F      G       L++ +  C+    +   
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            QLH  AIK    S   +GTA +D+YAK   +K A  + +    K +  ++++ +GF++ 
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN 236

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                E+V+ LF   +  GM+    T S +LS  AS A ++ G  +HA  +K G+  ++ 
Sbjct: 237 --GLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLF 294

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           V  +L+ +YAKCG I+ ++++F  + ++++V WNAM+++++ H     A++LFE+M++ G
Sbjct: 295 VATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVG 354

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             P++++ L +L AC ++GL E G   FN +       P + H++CMVD+LGR+G+  EA
Sbjct: 355 IFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEA 414

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
             L++  PF  +  +W +L+  S++  N + + +A+++L  LEP++ G+ +L+SN+YA  
Sbjct: 415 WKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAAS 474

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           G  +     R  + D    KE G SWIE   K+H FVA  ++HP   ++Y+KL+ +  EM
Sbjct: 475 GNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEM 534

Query: 741 -KLKVKDSSAFELQD 754
            K+  + ++  +L D
Sbjct: 535 RKISHRANTQCDLHD 549



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 180/380 (47%), Gaps = 11/380 (2%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           +L+++      L +G++ H   +  G   DT   N LINLY K  + D A+++FD M VR
Sbjct: 61  ELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVR 120

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           S I+W ++I GY  + +    L +   M+R   +  E T S  L AC+     I  +Q+H
Sbjct: 121 SIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLH 180

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             AIK   +++ FVGT+ + +Y      ++A  VF  +  K     + +   + + G  E
Sbjct: 181 TIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHE 240

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
               +F        +  ++T ++++S C     + EG Q+H + VK G  R + V  ++V
Sbjct: 241 EVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLV 300

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            +Y K G  E++  +F  + E+N++ W A+I+ + R  H  +A+  F +   +GI  +  
Sbjct: 301 DVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEV 360

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD------VRLGTALVDIYAKGGDLKSAR 416
              +++  CS    +E G   H F +    LSD      V   + +VD+  + G    A 
Sbjct: 361 TYLSILSACSHTGLVEEG--RHYFNL---LLSDRTAEPNVLHYSCMVDVLGRSGKTDEAW 415

Query: 417 MLLDGFSCKYTAEFNAILSG 436
            LLD    + TA     L G
Sbjct: 416 KLLDKMPFEPTASMWGSLLG 435



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 185/396 (46%), Gaps = 4/396 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           +L+ C+     + G+  H  AI  G   +      LI++Y   G    A  VF  ++ + 
Sbjct: 62  LLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRS 121

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +   N MI  Y    E   A  +F  +     +  ++T ++ +  C     + E KQLH 
Sbjct: 122 IISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHT 181

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
           +A+K  +     VG A + +Y K  M ++A  +F+ + E+  ++W++L +G+V++G   +
Sbjct: 182 IAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEE 241

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
            +  F      G+      +++++  C+  + +  G Q+H   +KHG+  ++ + T+LVD
Sbjct: 242 VLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVD 301

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +YAK G ++ +  +      K    +NA+++ F       E   M+LF + +  G+ P+ 
Sbjct: 302 VYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWE--AMILFEKMQQVGIFPNE 359

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYA-ADVIVGNALITMYAKCGSIDGAFQIFK 523
           VT+  +LS  +    +  GR      +    A  +V+  + ++ +  + G  D A+++  
Sbjct: 360 VTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLD 419

Query: 524 GISDRDIVS-WNAMLSAYALHGLGKGALLLFEEMKR 558
            +      S W ++L +  +H   + A +  E++ R
Sbjct: 420 KMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFR 455



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 4/290 (1%)

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D   L  ++  C+   +L +G   HG AI  G ++D      L+++Y K G    AR + 
Sbjct: 55  DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D  S +    +N +++G+     D E   + LFS+    G +    T S  L   A++  
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVE--ALKLFSRMHREGTQMTEFTLSSTLCACAAKYA 172

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           ++  + LH  +IK    +   VG A + +YAKC  I  A  +F+ + ++  V+W+++ + 
Sbjct: 173 IIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAG 232

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           +  +GL +  L LF+  +REG    + ++  +L  C    L   G  +   I + +G   
Sbjct: 233 FVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVK-HGFHR 291

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS 649
            L     +VD+  + G++ ++  +       ++ +LW  +++     A+S
Sbjct: 292 NLFVATSLVDVYAKCGQIEKSYEVFADME-EKNVVLWNAMIASFSRHAHS 340



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 5/157 (3%)

Query: 424 CKYTAEFNAILSG--FMEKIADDEEDVMVLFSQQRLAGMEPDPV---TFSRLLSLSASQA 478
           C+ T       SG  F  +   D+ +  ++   + L  +E D +   T   LL L A + 
Sbjct: 11  CQRTKALTLACSGIYFATRAFCDKPNHRIVHKDKNLVRVERDLIDVFTLHELLQLCAKRR 70

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L+ G+S H  +I  G   D +  N LI +Y KCG  D A ++F  +S R I+SWN M++
Sbjct: 71  SLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIA 130

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
            Y  +     AL LF  M REG    + ++   L AC
Sbjct: 131 GYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCAC 167


>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
 gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
          Length = 513

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 166/516 (32%), Positives = 284/516 (55%), Gaps = 6/516 (1%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N ++  Y      + AF V+  ++   F P+ +TF  V+  C + +G+ EG+Q+HG+ +K
Sbjct: 3   NALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVIIK 62

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G V  I V N++V  Y       +A R+FD +  R+++SWT +ISGYVR+G   +A+  
Sbjct: 63  MGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGL 122

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           FL    + +  +++   +V+  C     L +G  +HG + K  +   + +  AL+D+Y K
Sbjct: 123 FLR---MDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVK 179

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G L  A+ + D  + K    + +I+SG ++   +  ++ + LF   + +G+EPD +  +
Sbjct: 180 CGCLPGAKQVFDELAEKDIVSWTSIISGLVQ--CNCPKEALELFQDMQSSGIEPDGIILT 237

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            +LS  A    L  GR +H +  +     D+ +G A++ MYAKCG I+ + QIF G+  +
Sbjct: 238 SVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK 297

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           ++++WNA+L+  A+HG     L LFEEM R G  P++++ L +L AC + GL   G   F
Sbjct: 298 NVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYF 357

Query: 589 NEIE-QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
           N ++ Q Y L P LEH+ CMVDLL RA  L EA+ L  + P S    +   L+S  K   
Sbjct: 358 NWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENG 417

Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
           N++       R ++L+  D+G ++L+SN++A     D+  ++R  M +  + K  G + I
Sbjct: 418 NTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVI 477

Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK 743
           E+D K H F+     HP+ + I   L +L+D++ L+
Sbjct: 478 ELDGKAHEFIVGDTRHPQDKRIRLLLKILSDQIFLE 513



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 168/327 (51%), Gaps = 9/327 (2%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           T   +L++C+       G Q+H   IK GF  N++V  SL+  Y     F +A  VF  +
Sbjct: 36  TFPAVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEM 95

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             +DV     +I  Y +AG  + A  +F+ +   D EPN  TF +V+  C     +  GK
Sbjct: 96  LVRDVVSWTGVISGYVRAGLFDEAVGLFLRM---DVEPNAATFVSVLVACGRKGYLSVGK 152

Query: 281 QLHGLAVK--FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
            +HGL+ K  FGV  E+S  NA++ MY K G    A+++FD ++E++++SWT++ISG V+
Sbjct: 153 GIHGLSFKSAFGVGLEVS--NALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQ 210

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
                +A+  F +    GI  D   L +V+  C+    L+ G  +H    +     D+++
Sbjct: 211 CNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQI 270

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           GTA+VD+YAK G ++ +  + +G   K    +NA+L+G    +      V+ LF +    
Sbjct: 271 GTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGL--AMHGHAYKVLELFEEMVRV 328

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRS 485
           GM P+ VTF  +L+       +  GR 
Sbjct: 329 GMRPNEVTFLAILTACCHCGLVNEGRQ 355



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 3/322 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VH  ++K G   + +  N+L++ Y+   R   A ++FD MLVR  ++WT +I GY+ 
Sbjct: 53  GRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVR 112

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            G ++  +G+     R + + N  T   +L AC        G+ IH  + KS F   + V
Sbjct: 113 AGLFDEAVGL---FLRMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEV 169

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L+ MY   GC   A+ VF  LA KD+     +I    +    + A  +F  + SS  
Sbjct: 170 SNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGI 229

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           EP+    T+V+S C     ++ G+ +H    +  +  +I +G A+V MY K G  E + +
Sbjct: 230 EPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQ 289

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +F+ +  +N+++W AL++G    GH  K +  F E + +G+  +      ++  C  C  
Sbjct: 290 IFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGL 349

Query: 377 LELGLQLHGFAIKHGYLSDVRL 398
           +  G Q   +     Y    RL
Sbjct: 350 VNEGRQYFNWMKGQQYNLPPRL 371



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 148/313 (47%), Gaps = 7/313 (2%)

Query: 329 WTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
           + AL+SGY        A   +   +  G   D      V+  C+    +  G Q+HG  I
Sbjct: 2   FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
           K G++ ++ +  +LV  Y+       A  + D    +    +  ++SG++     DE   
Sbjct: 62  KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDE--A 119

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITM 508
           + LF +     +EP+  TF  +L     +  L  G+ +H  S K+ +   + V NAL+ M
Sbjct: 120 VGLFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDM 176

Query: 509 YAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISI 568
           Y KCG + GA Q+F  ++++DIVSW +++S        K AL LF++M+  G  PD I +
Sbjct: 177 YVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIIL 236

Query: 569 LGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
             VL AC   G  + G  +   I++   ++  ++    MVD+  + G +  +M + N  P
Sbjct: 237 TSVLSACARLGALDYGRWVHEHIDR-KAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMP 295

Query: 629 FSESPLLWRTLVS 641
             ++ L W  L++
Sbjct: 296 -HKNVLTWNALLN 307



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 100/211 (47%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
            G L +G+ +H    KS        +N L+++Y K   L  A+++FD +  +  ++WTS+
Sbjct: 145 KGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSI 204

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I G +     +  L +  DM  S  + +    + +L AC+ L    +G  +H    +   
Sbjct: 205 ISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAI 264

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + ++ +GT+++ MY   GC   +  +F G+ +K+V   N ++      G +     +F  
Sbjct: 265 KWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEE 324

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
           ++     PN+ TF  +++ C     V EG+Q
Sbjct: 325 MVRVGMRPNEVTFLAILTACCHCGLVNEGRQ 355


>gi|297734798|emb|CBI17032.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 176/553 (31%), Positives = 300/553 (54%), Gaps = 13/553 (2%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           N+F+   +++MY   G    A   F  +  +++     ++  Y + G  +  F VF  +L
Sbjct: 89  NLFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSRYAQHGWPDECFRVFTDML 148

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH-GMS 311
                P ++ F +VIS        + G+Q+H LAVK      + VGN ++ MY +  G +
Sbjct: 149 ICH-RPTEFAFASVIST--SGGDGDCGRQVHALAVKTSFDSCVYVGNVLIMMYCRSCGGT 205

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG- 370
           +EA  +++A+  RNL+SW  +I+G+   G G +A+  F +    GI  D + L  +    
Sbjct: 206 DEAWNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMHFGGIRFDRATLVNIFSCL 265

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK-GGDLKSA-RMLLDGFSCKYTA 428
           C +   LE   QL     K G++S++ + T LV  Y+  GG++    R+ L+    +   
Sbjct: 266 CGMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLGGEVNDCYRIFLELDGRQDVV 325

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            +  I++ F E+   D E+  +LF Q     + PD   FS +L   A  A      ++ +
Sbjct: 326 SWTGIIAVFAER---DPEEAFLLFRQFLRECLAPDRHMFSIVLKACAGLATEGHALTVQS 382

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           + +K G+  D+++ NALI   A+CGS+  + Q F  I  RD VSWN+ML AYA+HG GK 
Sbjct: 383 HVLKVGFEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDTVSWNSMLKAYAMHGQGKE 442

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
           AL LF +M  +   PD  + + ++ AC ++G+ E G  +F  +   +G+ P L+H+ACMV
Sbjct: 443 ALQLFSQMDAQ---PDGATFVALISACSHAGMVEEGAKIFEAMSNNHGIVPQLDHYACMV 499

Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
           D+LGRAGR+ EA  LI+  P     ++W  L+   +    +KF+ LA+ +L +L+P ++ 
Sbjct: 500 DILGRAGRIYEAKELIDKMPMEPDSMVWSALLGGCRKHGETKFAKLAAVKLKELDPNNSL 559

Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
            +IL+SN+++  G  +EA  +R  M    + KE G SWI++ +++H F + G+ HPE E 
Sbjct: 560 GYILMSNIFSTNGHFNEARLIRREMERKTVRKEPGLSWIQVGNQVHEFASGGQQHPEKEA 619

Query: 729 IYSKLDLLNDEMK 741
           + ++L+ L  ++K
Sbjct: 620 LCARLEELVRQLK 632



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 238/551 (43%), Gaps = 27/551 (4%)

Query: 17  QQSLPPLKKKVPINTFSPNPKS-QVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLK 75
            QS PP     P     P P+S Q   L   ++ +C     L    P +           
Sbjct: 18  HQSSPPYS---PSLLSRPPPRSSQTLLLHHPTTSTCPFPPHLRRSLPPVRPPQFSPH--- 71

Query: 76  LGQAVHAFLLKSGSQND--TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            G A+H  +L     +D   F  N+++N+YAK   LD A + FD ML R+ ++WT+L+  
Sbjct: 72  -GPALHCHMLLHNPNSDFNLFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSR 130

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y   G  +    +  DM            SVI  +     D   G Q+HA A+K+ F++ 
Sbjct: 131 YAQHGWPDECFRVFTDMLICHRPTEFAFASVISTSGG---DGDCGRQVHALAVKTSFDSC 187

Query: 194 VFVGTSLISMYFHS-GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           V+VG  LI MY  S G   EA NV+  + ++++   NFMI  +   G    A  +F  + 
Sbjct: 188 VYVGNVLIMMYCRSCGGTDEAWNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMH 247

Query: 253 SSDFEPNDYTFTNVIS-VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-HGM 310
                 +  T  N+ S +C    G+E   QL  L  K G + EI V   +V  Y    G 
Sbjct: 248 FGGIRFDRATLVNIFSCLCGMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLGGE 307

Query: 311 SEEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             +  R+F  +  R +++SWT +I+ +       +A   F +FL   +  D    + V+ 
Sbjct: 308 VNDCYRIFLELDGRQDVVSWTGIIAVFAERD-PEEAFLLFRQFLRECLAPDRHMFSIVLK 366

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+  +     L +    +K G+  D+ L  AL+   A+ G +  ++   D    + T  
Sbjct: 367 ACAGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDTVS 426

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR--GRSLH 487
           +N++L  +   +    ++ + LFSQ      +PD  TF  L+S + S A +V    +   
Sbjct: 427 WNSMLKAY--AMHGQGKEALQLFSQM---DAQPDGATFVALIS-ACSHAGMVEEGAKIFE 480

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHGLG 546
           A S   G    +     ++ +  + G I  A ++   +  + D + W+A+L     HG  
Sbjct: 481 AMSNNHGIVPQLDHYACMVDILGRAGRIYEAKELIDKMPMEPDSMVWSALLGGCRKHGET 540

Query: 547 KGALLLFEEMK 557
           K A L   ++K
Sbjct: 541 KFAKLAAVKLK 551


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 179/658 (27%), Positives = 332/658 (50%), Gaps = 3/658 (0%)

Query: 98  NLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF 157
           +LI  +    R+D A   F G+    A     +I+G+ D       L     M  +  + 
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +  T  V+L+ C+       G   HA  IK G   +V+   SL+++Y   G   +AE VF
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYT-FTNVISVCYENLGV 276
            G+  +D+   N M+  Y   G   +A   F  +  +    +D       ++ C     +
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
             G+++HG A++ G+ +++ VG ++V MY K G    AE +F  +  R +++W  +I GY
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGY 298

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
             +     A + F++    G   +      ++  C+   +   G  +H + ++  +L  V
Sbjct: 299 ALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHV 358

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            L TAL+++Y K G ++S+  +    + K    +N +++ +M    +  ++ + LF +  
Sbjct: 359 VLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYM--YMEMYQEAIALFLELL 416

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
              + PD  T + ++        + + + +H+Y +K GY    ++ NA++ MYA+CG+I 
Sbjct: 417 NQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIV 476

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            + +IF  +  +D++SWN ++  YA+HG GK AL +F+EMK  G  P++ + + VL AC 
Sbjct: 477 ASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACS 536

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
            SGL   G   FN ++Q YG+ P +EH+ CM DLLGRAG L E +  I + P + +  +W
Sbjct: 537 VSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIW 596

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
            +L++ S+   +   +  A++R+  LE  + G ++++S+MYA  G  ++  ++R+ M + 
Sbjct: 597 GSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEK 656

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFELQD 754
            L +    S +E+++K   FV     HP+SE+I+   D+L+  +   +  SS     D
Sbjct: 657 GLRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILSRNIGEDLDSSSNLRDSD 714



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 216/426 (50%), Gaps = 12/426 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K    +G L  G+A HA ++K G   D + AN+L+ LYAK   +  A+++FDGM 
Sbjct: 123 FPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMP 182

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVI--LEACSLLEDRIF 177
            R  ++W +++ GY+ +G     L +AC    ++  +    +  VI  L AC L      
Sbjct: 183 ARDIVSWNTMVDGYVSNG--MGALALACFREMNDALQVGHDSVGVIAALAACCLESALAL 240

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G +IH +AI+ G E +V VGTSL+ MY   G    AENVF  +  + V   N MI  Y  
Sbjct: 241 GREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYAL 300

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
                 AF  F+ +    F+    T  N+++ C +      G+ +H   V+   +  + +
Sbjct: 301 NERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVL 360

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             A++ MYGK G  E +E++F  I+++ L+SW  +I+ Y+      +AI  FLE L+  +
Sbjct: 361 ETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPL 420

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D   + TV+    +  ++    Q+H + +K GY     +  A++ +YA+ G++ ++R 
Sbjct: 421 YPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASRE 480

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +N I+ G+   I    +  + +F + + +GMEP+  TF  +L+     
Sbjct: 481 IFDKMPGKDVISWNTIIIGY--AIHGQGKIALEMFDEMKCSGMEPNESTFVSVLT----- 533

Query: 478 ACLVRG 483
           AC V G
Sbjct: 534 ACSVSG 539


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 170/613 (27%), Positives = 323/613 (52%), Gaps = 4/613 (0%)

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I+G+ D G  E+ L     M  +  + +  T  V+++ C+ L     G   H+ AI+ G
Sbjct: 78  VIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLG 137

Query: 190 F-ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
              + V+ G SL++ Y   G   +AE VF G+  +D+   N M+  Y   G   +A   F
Sbjct: 138 LVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCF 197

Query: 249 VHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
             +      + +       ++ C  +  + +G+++H   ++ G+ +++ VG +++ MY K
Sbjct: 198 REMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCK 257

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            G    AE MF  +  R +++W  +I GY  +G   +A + F++    G   +      +
Sbjct: 258 CGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINL 317

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C+   +   G  +HG+  +  +L  V L TAL+++Y+K G +KS+  +    + K  
Sbjct: 318 LAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTL 377

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +N +++ +M K   +E   + LF +     + PD  T S ++        L + R +H
Sbjct: 378 VSWNNMIAAYMYKEMYNE--AITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMH 435

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
           +Y ++  Y  + +V NA++ MYA+CG +  + +IF  ++ +D++SWN ++  YA+HG GK
Sbjct: 436 SYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGK 495

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            AL +F EMK  G  P++ + + VL AC  SG+++ G   FN +++ YG+ P +EH+ CM
Sbjct: 496 IALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCM 555

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
            DLLGRAG L E +  I S P + +  +W +L++ S+   +   +  A++R+ +LE  + 
Sbjct: 556 TDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDNT 615

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
           G ++++S+MYA  G  ++  ++R++M +  L +    S +E+      FV     HP+S+
Sbjct: 616 GCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQSK 675

Query: 728 EIYSKLDLLNDEM 740
            I+   D+L+ ++
Sbjct: 676 TIHEVSDVLSRKI 688



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 233/462 (50%), Gaps = 11/462 (2%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N +I  +  AG  E A   +  +L++   P+ +TF  V+  C     +EEG+  H  A++
Sbjct: 76  NVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIR 135

Query: 289 FGVV-REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
            G+V  E+  GN+++  Y K GM  +AER+FD +  R++++W +++ GYV +G G  A++
Sbjct: 136 LGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALD 195

Query: 348 GFLEFLD-LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
            F E  + L +  D   +   +  C + S L  G ++H + I+HG   DV++GT+L+D+Y
Sbjct: 196 CFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMY 255

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
            K G + SA  +      +    +N ++ G+   +    E+    F Q +  G + + VT
Sbjct: 256 CKCGAIASAEGMFATMPSRTVVTWNCMIGGY--ALNGCPEEAFDCFVQMKAEGHQVEVVT 313

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
              LL+  A     + GRS+H Y  ++ +   V++  AL+ MY+K G +  +  IF  ++
Sbjct: 314 AINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMT 373

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           ++ +VSWN M++AY    +   A+ LF E+  +   PD  ++  V+ A +  GL      
Sbjct: 374 NKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQ 433

Query: 587 LFNEIEQI-YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL 645
           + + I ++ YG   ++ +   ++ +  R G +  +  + +     +  + W T++    +
Sbjct: 434 MHSYIVRLDYGENTLVTN--AVMHMYARCGDVVSSRKIFDKMA-GKDVISWNTIIMGYAI 490

Query: 646 MANSKFSI--LASKRLLDLEPKDAGSFILVSNMYAGQGMLDE 685
               K ++   +  +   L+P ++ +F+ V    +  GM DE
Sbjct: 491 HGQGKIALEMFSEMKSNGLQPNES-TFVSVLTACSVSGMADE 531



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 214/430 (49%), Gaps = 19/430 (4%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           +P +VK     G L+ G+A H+  ++ G   ++ +  N+L+  YAK   +  A+++FDGM
Sbjct: 110 FPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGM 169

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLG-IACDMYRSEE---KFNEHTCSVI--LEACSLLE 173
            VR  +TW S++ GY+ +G     LG +A D +R      +       +I  L AC L  
Sbjct: 170 PVRDIVTWNSMVDGYVSNG-----LGALALDCFREMHEGLQVQHDGVGIIAALAACCLDS 224

Query: 174 DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
             + G ++HA+ I+ G E +V VGTSL+ MY   G    AE +F  +  + V   N MI 
Sbjct: 225 ALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIG 284

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
            Y   G  E AF  FV + +   +    T  N+++ C +      G+ +HG   +   + 
Sbjct: 285 GYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLP 344

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
            + +  A++ MY K G  + +E +F  ++ + L+SW  +I+ Y+      +AI  FLE L
Sbjct: 345 HVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELL 404

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
           +  +  D   ++ V+    +   L    Q+H + ++  Y  +  +  A++ +YA+ GD+ 
Sbjct: 405 NQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVV 464

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           S+R + D  + K    +N I+ G+   I    +  + +FS+ +  G++P+  TF  +L+ 
Sbjct: 465 SSRKIFDKMAGKDVISWNTIIMGY--AIHGQGKIALEMFSEMKSNGLQPNESTFVSVLT- 521

Query: 474 SASQACLVRG 483
               AC V G
Sbjct: 522 ----ACSVSG 527



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 162/342 (47%), Gaps = 3/342 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L  G+ VHA++++ G + D     +L+++Y K   +  A+ +F  M  R+ +TW  +I G
Sbjct: 226 LMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGG 285

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y  +G  E        M     +    T   +L AC+  E  ++G  +H +  +S F  +
Sbjct: 286 YALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPH 345

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V + T+L+ MY   G  + +E +F  +  K +   N MI  Y        A  +F+ LL+
Sbjct: 346 VVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLN 405

Query: 254 SDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
               P+ +T + V+   +  LG + + +Q+H   V+        V NA++ MY + G   
Sbjct: 406 QPLYPDYFTMSAVVPA-FVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVV 464

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            + ++FD ++ +++ISW  +I GY   G G  A+  F E    G+  + S   +V+  CS
Sbjct: 465 SSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACS 524

Query: 373 VCSNLELG-LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
           V    + G +Q +     +G +  +     + D+  + GDL+
Sbjct: 525 VSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLR 566


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 156/481 (32%), Positives = 278/481 (57%), Gaps = 4/481 (0%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           + ++++ C     + EG+++H   +K   +  + +   ++ +Y K     +A  MFD + 
Sbjct: 65  YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           +RN++SWTA+IS Y + G   +A+N F+E L      +    AT++  C      E G Q
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 184

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H  AIK  Y S + +G++L+D+YAK G +  A  +      +      AI+SG+ +   
Sbjct: 185 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGL 244

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D+E   + LF Q ++ GM  + VT++ +L+  +  A L  G+ +H++ +++G  + V++ 
Sbjct: 245 DEE--ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLL 302

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-F 561
           N+LI MY+KCG++  A +IF  + +R  +SWNAML  Y+ HG+ +  L LF+ M+ E   
Sbjct: 303 NSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKV 362

Query: 562 APDDISILGVLQACIYSGLSEGGICLF-NEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            PD I+ L VL  C +  L + G+ +F N +    G+ P + H+ C+VDLLGRAGR+ EA
Sbjct: 363 KPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 422

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
            + I   PF  +  +W +L+   ++ ++ +  I+  ++LL+LEP++AG+++++SN+YA  
Sbjct: 423 FDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASA 482

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           G  ++   +R  M +  ++KE G SW+E+D  +H F AS   HP  EE+ +K+  L+ + 
Sbjct: 483 GKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKF 542

Query: 741 K 741
           K
Sbjct: 543 K 543



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 208/443 (46%), Gaps = 15/443 (3%)

Query: 31  TFSPNPKSQVAYLCS-------ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAF 83
           +FSP+P  +   LCS       +  ++   R + F  +  ++   +    ++ GQ VH  
Sbjct: 30  SFSPSPNLKT--LCSSGQLKEALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTH 87

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           ++K+      +    LI LY K + L  A+ +FD M  R+ ++WT++I  Y   G     
Sbjct: 88  MIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEA 147

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
           L +  +M RS+ + N  T + IL +C        G QIH+ AIK  +E+++FVG+SL+ M
Sbjct: 148 LNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDM 207

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y  SG   +A  VF  L  +DV     +I  Y + G  E A  +F  L       N  T+
Sbjct: 208 YAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTY 267

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
            +V++       +  GKQ+H   ++ G    + + N+++ MY K G    A R+FD++ E
Sbjct: 268 ASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPE 327

Query: 324 RNLISWTALISGYVRSGHGGKAINGF-LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           R  ISW A++ GY + G   + +  F L   +  +  DS     V+ GCS     ++GL+
Sbjct: 328 RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLE 387

Query: 383 LHGFAI--KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
           +    +  K G   D+     +VD+  + G ++ A   +       TA     L G    
Sbjct: 388 IFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRV 447

Query: 441 IADDEEDVMVLFSQQRLAGMEPD 463
            +D E  ++V    Q+L  +EP+
Sbjct: 448 HSDVEIGIIV---GQKLLELEPE 467



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 191/370 (51%), Gaps = 6/370 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+++H   IK+ +  +V++ T LI +Y    C  +A  +F  +  ++V     MI  Y++
Sbjct: 81  GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQ 140

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G +  A ++FV +L SD EPN +TF  +++ CY +LG E G+Q+H +A+K      + V
Sbjct: 141 RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFV 200

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G++++ MY K G   +A  +F  + ER++++ TA+ISGY + G   +A+  F +    G+
Sbjct: 201 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 260

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +S   A+V+   S  + L  G Q+H   ++ G  S V L  +L+D+Y+K G++  AR 
Sbjct: 261 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 320

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG-MEPDPVTFSRLLSLSAS 476
           + D    +    +NA+L G+ +     E  V+ LF   R    ++PD +T+  +LS  + 
Sbjct: 321 IFDSMPERTCISWNAMLVGYSKHGMARE--VLELFKLMREENKVKPDSITYLAVLSGCSH 378

Query: 477 QACLVRGRSLHAYSI--KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-W 533
                 G  +    +  K G   D+     ++ +  + G ++ AF   K +      + W
Sbjct: 379 GQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIW 438

Query: 534 NAMLSAYALH 543
            ++L +  +H
Sbjct: 439 GSLLGSCRVH 448



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 7/178 (3%)

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           Q  + G E     +  +L+   SQ  +  G+ +H + IKT Y   V +   LI +Y KC 
Sbjct: 52  QMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCD 111

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            +  A  +F  +  R++VSW AM+SAY+  G    AL LF EM R    P+  +   +L 
Sbjct: 112 CLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILT 171

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHF---ACMVDLLGRAGRLSEAMNLINSSP 628
           +C  S   E G     +I  I   R    H    + ++D+  ++GR+ +A  + +  P
Sbjct: 172 SCYGSLGFETG----RQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 191/614 (31%), Positives = 315/614 (51%), Gaps = 59/614 (9%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           E +HA  IK+G       G  L+++Y  S    +A  +F  +   DV     +I  + + 
Sbjct: 308 EVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARI 365

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISV 297
           G S     +F  +      PN +T + V+  C  N+     GK +HG  ++ G+  +  +
Sbjct: 366 GLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVL 425

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            N+I+  Y K      AE++F  ++E++ +SW  ++S Y++ G   K+++ F +      
Sbjct: 426 NNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGK-- 483

Query: 358 CCDSSCLATVIDG-----------------------------------CSVCSNLELGLQ 382
             D++   T+IDG                                    S  S L LG Q
Sbjct: 484 --DAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQ 541

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF-----------SCK----YT 427
           +H   +K G L D  +  +L+D+Y K G+++ A ++               SC      +
Sbjct: 542 IHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVES 601

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +++++SG+++      ED +  FS    + +E D  T + ++S  AS   L  GR +H
Sbjct: 602 VSWSSMVSGYVQN--GRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVH 659

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            Y  K G+  DV +G+++I MY KCGS++ A+ IF    DR++V W +M+S  ALHG G+
Sbjct: 660 GYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGR 719

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            A+ LFE M  EG  P+++S +GVL AC ++GL E G   F  + ++YG+RP  EHF CM
Sbjct: 720 EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCM 779

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VDL GRAGRL+E    I+++  S+   +WR+ +S  ++  N +  I   K+LL+LEP DA
Sbjct: 780 VDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDA 839

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
           G +IL S++ A +   +EAAK+R+ M    + K    SWI++ +++H FV   + HP+  
Sbjct: 840 GPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDT 899

Query: 728 EIYSKLDLLNDEMK 741
           +IYS LD L   +K
Sbjct: 900 KIYSYLDELIGRLK 913



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 233/523 (44%), Gaps = 69/523 (13%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA L+K+G        N+L+NLYAK   L+ A K+F+ +      +WT LI G+   
Sbjct: 308 EVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARI 365

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSL-LEDRIFGEQIHAFAIKSGFENNVFV 196
           G    VLG+   M       N+ T S++L++CS  + D   G+ IH + +++G + +  +
Sbjct: 366 GLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVL 425

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD- 255
             S++  Y    CF  AE +F  +A KD    N M+  Y + G+ + +  +F  L   D 
Sbjct: 426 NNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDA 485

Query: 256 --------------------------------FEPNDYTFTNVISVCYENLGVEEGKQLH 283
                                           F    ++   V++     LG+  GKQ+H
Sbjct: 486 ASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGL--GKQIH 543

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF-----------------DAISERNL 326
              +K GV+ +  V N+++ MY K G  E+A  +F                 DA+ E   
Sbjct: 544 TQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVES-- 601

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           +SW++++SGYV++G    A+  F   +   +  D   L +V+  C+    LELG Q+HG+
Sbjct: 602 VSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGY 661

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
             K G+  DV LG++++D+Y K G L  A ++ +    +    + +++SG    +     
Sbjct: 662 IQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGC--ALHGQGR 719

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-----HAYSIKTGYAADVIV 501
           + + LF      G+ P+ V+F  +L+  +    L  G          Y I+ G       
Sbjct: 720 EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEH---- 775

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
              ++ +Y + G ++   +     +   + S W + LS+  +H
Sbjct: 776 FTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVH 818



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 222/495 (44%), Gaps = 61/495 (12%)

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           LSS F P    F++  S   +++     + LH   +K G V     GN ++ +Y K    
Sbjct: 283 LSSYFYPPLXYFSSTFS---DSMNYPNSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNL 337

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           E+A +MF+ I + ++ SWT LISG+ R G     +  F +  D G+C +   L+ V+  C
Sbjct: 338 EQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSC 397

Query: 372 SVCSN-LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG--------------------- 409
           S   N   +G  +HG+ +++G   D  L  +++D Y K                      
Sbjct: 398 SSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSW 457

Query: 410 ----------GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
                     GD++ +  L      K  A +N ++ G M      E   + L  +   AG
Sbjct: 458 NIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRN--GCERVALELLYKMVAAG 515

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
              + +TFS  L L++S + L  G+ +H   +K G   D  V N+LI MY KCG ++ A 
Sbjct: 516 PAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKAS 575

Query: 520 QIFKGISDR---------------DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
            IFK +                  + VSW++M+S Y  +G  + AL  F  M       D
Sbjct: 576 VIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVD 635

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQI-YGLRPILEHFACMVDLLGRAGRLSEAMNL 623
             ++  V+ AC  +G+ E G  +   I++I +GL   L   + ++D+  + G L++A  +
Sbjct: 636 KFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLG--SSIIDMYVKCGSLNDAWLI 693

Query: 624 INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD--LEPKDAGSFILVSNMYAGQG 681
            N +    + +LW +++S   L    + ++   + +++  + P +  SF+ V    +  G
Sbjct: 694 FNQAK-DRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEV-SFVGVLTACSHAG 751

Query: 682 MLDEAAKVRTTMNDL 696
           +L+E  K    M ++
Sbjct: 752 LLEEGCKYFRLMREV 766



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 192/437 (43%), Gaps = 50/437 (11%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D ++G+ +H ++L++G   D    N++++ Y K      A+KLF  M  +  ++W  ++ 
Sbjct: 403 DSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMS 462

Query: 133 GYLDDGDYESVLGI----------------------ACD---------MYRSEEKFNEHT 161
            YL  GD +  + +                       C+         M  +   FN+ T
Sbjct: 463 SYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLT 522

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
            S+ L   S L     G+QIH   +K G  ++ FV  SLI MY   G   +A  +F+ L 
Sbjct: 523 FSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLP 582

Query: 222 YKD-------------VRCVNF--MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV 266
            +              V  V++  M+  Y + G  E A   F  ++ S  E + +T T+V
Sbjct: 583 QESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSV 642

Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
           +S C     +E G+Q+HG   K G   ++ +G++I+ MY K G   +A  +F+   +RN+
Sbjct: 643 VSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNV 702

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           + WT++ISG    G G +A+  F   ++ GI  +      V+  CS    LE G +    
Sbjct: 703 VLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRL 762

Query: 387 AIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
             + +G        T +VD+Y + G L   +  +        ++ +++   F+      +
Sbjct: 763 MREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHN---NAISKLSSVWRSFLSSCRVHK 819

Query: 446 EDVMVLFSQQRLAGMEP 462
              M ++  ++L  +EP
Sbjct: 820 NIEMGIWVCKKLLELEP 836



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 13/233 (5%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           +G L+LG+ VH ++ K G   D F  +++I++Y K   L+ A  +F+    R+ + WTS+
Sbjct: 649 AGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSM 708

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFA 185
           I G    G     + +   M       NE +   +L ACS   LLE+  + F      + 
Sbjct: 709 ISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYG 768

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES-EMA 244
           I+ G E+     T ++ +Y  +G   E +      A   +  V    L   +  ++ EM 
Sbjct: 769 IRPGAEHF----TCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMG 824

Query: 245 FHVFVHLLSSDFEPNDY-TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             V   LL  + EP D   +    S+C      EE  ++  L  + GV +  S
Sbjct: 825 IWVCKKLL--ELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPS 875


>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Cucumis sativus]
          Length = 688

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 205/674 (30%), Positives = 319/674 (47%), Gaps = 40/674 (5%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
            K G A+HA+L K G  ND F ANNLI++YA+F  +  A+K+FD M  R+ +TWT+++  
Sbjct: 19  FKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTWTTMVSA 78

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           + D G     + +  DM +SE   N +  S +L+AC  + D   G+ I     +   + +
Sbjct: 79  FTDGGRPYEAIRLYNDMPKSETP-NGYMYSAVLKACGFVGDLGLGKLIQERIYEDKLQAD 137

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG---ESEMAFHVFVH 250
             +  SL+ M+   G   +A  VF  ++       N ++  Y+KAG   E+E  FH   H
Sbjct: 138 TILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKLFHCMPH 197

Query: 251 L-------LSSDFEPN--------------------DYTFTNVISVCYENLGVEEGKQLH 283
                   + + F  N                    D+TF   + +   +  +  GKQ+H
Sbjct: 198 PNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVH 257

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE------RNLISWTALISGYV 337
               K G        +A++ MY       EA ++FD  S        NL  W +++SGYV
Sbjct: 258 SYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYV 317

Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
            +     A+N   E    G   DS      +  C    +  +GLQLHG  +  GY  D  
Sbjct: 318 INNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYV 377

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
           +G+ LVD+YAK  ++  A  +      K    ++ ++ G   +I  +     +      L
Sbjct: 378 VGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMG-CAQIGLNWLAFSMFKGMLEL 436

Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
              E D    S +L + ++ A L  G+ +HA  +K+GY  +     +L+ MY+KCG I+ 
Sbjct: 437 VN-EIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIED 495

Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
           A  +F    ++DIVSW  ++     +G    A+  F EM R G  P++I+ LGVL AC Y
Sbjct: 496 ALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRY 555

Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
           +GL E    +FN ++ +YGL P LEH+ CMVDLL   G   EA  LI + PF  +   WR
Sbjct: 556 AGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMPFEPNQTTWR 615

Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
           TL+       ++K     +  LL+  P D  +++ +SN YA  GM    +K R       
Sbjct: 616 TLLGACGTRNDTKLINRVADGLLEATPNDPSTYVTLSNAYASLGMWHTLSKAREASKKFG 675

Query: 698 LSKEAGCSWIEIDS 711
           + K+AG SWIE+ S
Sbjct: 676 I-KKAGLSWIEVSS 688



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 222/506 (43%), Gaps = 64/506 (12%)

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L  C+ +     G  IHA+  K G  N+VF+  +LISMY      R+AE VF  +  +++
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--YENLGVEEGKQ-- 281
                M+  +   G    A  ++  +  S+  PN Y ++ V+  C    +LG+ +  Q  
Sbjct: 70  VTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLGKLIQER 128

Query: 282 ---------------LHGLAVKFGVVRE------------ISVGNAIVTMYGKHGMSEEA 314
                          L  + VK G + +             +  N IV+ Y K G+  EA
Sbjct: 129 IYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEA 188

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL----GICCDSSCLATVIDG 370
           E++F  +   N++SW ++I+G+  +G         LEF+ +     I  D       +  
Sbjct: 189 EKLFHCMPHPNVVSWNSMIAGFADNGSQRA-----LEFVSMMHKRCIKLDDFTFPCALKI 243

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS------C 424
            ++   L +G Q+H +  K GY S     +AL+D+Y+   DL  A  L D  S       
Sbjct: 244 SALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASIS 303

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
              A +N++LSG++  I + ++  + L S+   +G   D  TF   L +  +      G 
Sbjct: 304 DNLALWNSMLSGYV--INNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGL 361

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            LH   +  GY  D +VG+ L+ +YAK  +ID A  IF  +  +DI++W+ ++   A  G
Sbjct: 362 QLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIG 421

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQAC-----IYSGLSEGGICLFNEIEQIYGLRP 599
           L   A  +F+ M       D   I  +L+ C     + SG     +C+ +  E       
Sbjct: 422 LNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYE------- 474

Query: 600 ILEHFAC--MVDLLGRAGRLSEAMNL 623
            +E F    ++D+  + G + +A+ L
Sbjct: 475 -MEGFTITSLLDMYSKCGEIEDALTL 499



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 161/327 (49%), Gaps = 8/327 (2%)

Query: 53  ERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLD 110
           +R +  +D+  P  +KIS   G L +G+ VH+++ K G ++  F  + LI++Y+  N L 
Sbjct: 227 KRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLI 286

Query: 111 VAQKLFD------GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
            A KLFD        +  +   W S++ GY+ +   ++ L +  +++ S    + +T   
Sbjct: 287 EAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGG 346

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
            L+ C  L  R  G Q+H   +  G+E +  VG+ L+ +Y       +A  +F  L  KD
Sbjct: 347 ALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKD 406

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +   + +I+   + G + +AF +F  +L    E + +  + ++ VC     +  GKQ+H 
Sbjct: 407 IIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHA 466

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
           L VK G   E     +++ MY K G  E+A  +F    E++++SWT +I G  ++G   +
Sbjct: 467 LCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAE 526

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGC 371
           A+  F E +  GI  +      V+  C
Sbjct: 527 AVRFFHEMIRSGITPNEITFLGVLSAC 553



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 206/484 (42%), Gaps = 55/484 (11%)

Query: 53  ERTLLFNDWPQ-----------LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLIN 101
           E   L+ND P+           ++K     GDL LG+ +   + +   Q DT   N+L++
Sbjct: 87  EAIRLYNDMPKSETPNGYMYSAVLKACGFVGDLGLGKLIQERIYEDKLQADTILMNSLMD 146

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY--------------------------- 134
           ++ K   L+ A ++F  +   +  TW  ++ GY                           
Sbjct: 147 MFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSM 206

Query: 135 ---LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
                D   +  L     M++   K ++ T    L+  +L      G+Q+H++  K G+E
Sbjct: 207 IAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYE 266

Query: 192 NNVFVGTSLISMYFHSGCFREA------ENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
           ++ F  ++LI MY +     EA       + F      ++   N M+  Y      + A 
Sbjct: 267 SSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAAL 326

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
           ++   +  S    + YTF   + VC   L    G QLHGL V  G   +  VG+ +V +Y
Sbjct: 327 NLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLY 386

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K    ++A  +F  +  +++I+W+ LI G  + G    A + F   L+L    D   ++
Sbjct: 387 AKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVIS 446

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC- 424
           T++  CS  ++L  G Q+H   +K GY  +    T+L+D+Y+K G+++ A  L   F C 
Sbjct: 447 TILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTL---FCCE 503

Query: 425 --KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    +  I+ G  +       + +  F +   +G+ P+ +TF  +LS       +  
Sbjct: 504 QEKDIVSWTGIIVGCGQN--GKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEE 561

Query: 483 GRSL 486
            RS+
Sbjct: 562 ARSI 565



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 7/312 (2%)

Query: 46  ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK 105
           +S + CS   L    +   +K+ I     ++G  +H  ++  G + D    + L++LYAK
Sbjct: 329 LSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAK 388

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
              +D A  +F  +  +  I W+ LI G    G       +   M     + +    S I
Sbjct: 389 LANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTI 448

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           L+ CS L     G+Q+HA  +KSG+E   F  TSL+ MY   G   +A  +F     KD+
Sbjct: 449 LKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDI 508

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HG 284
                +I+   + G++  A   F  ++ S   PN+ TF  V+S C     VEE + + + 
Sbjct: 509 VSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNS 568

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGG 343
           +   +G+   +     +V +    G+ EEAE++   +  E N  +W  L+ G   + +  
Sbjct: 569 MKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLL-GACGTRNDT 627

Query: 344 KAIN----GFLE 351
           K IN    G LE
Sbjct: 628 KLINRVADGLLE 639


>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
 gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 160/487 (32%), Positives = 273/487 (56%), Gaps = 10/487 (2%)

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P+ YTF  +I    E + V + K++HGL  K G+  ++ VG+++V+ Y K  + +EA  +
Sbjct: 58  PDKYTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEAREL 117

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD I +R+++ W ++++GY + G   +A+    E    G+      ++ V+   +   + 
Sbjct: 118 FDEIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDF 177

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           + G  +HGF IK G+ S V +  AL+D+Y K   +  A  + +  + K    +N+ILS  
Sbjct: 178 DNGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSA- 236

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
             ++  D +  + LF +    G++ D VT + +L   +  A LV GR +H Y I  G+  
Sbjct: 237 -NELCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVK 295

Query: 498 D--------VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           D        +   NAL+ MYAKCGS+  A  +F  +S+RD  SWN M+  Y +HG G  A
Sbjct: 296 DGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEA 355

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L +F +M + G  P++I+ +GVL AC ++G    GI    E+E  +G+ P ++H+ C++D
Sbjct: 356 LYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVID 415

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           +LGRAG+L EA  L  + P   +P++WR L++  +L  N   + +A++++ +L P   G+
Sbjct: 416 MLGRAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGN 475

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++L+SN Y   G   E   +R TM    + K  GCSWIE+ + ++ F+   ++HPE+  I
Sbjct: 476 YVLMSNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFINGDRNHPEARLI 535

Query: 730 YSKLDLL 736
           Y +L LL
Sbjct: 536 YPELHLL 542



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 231/458 (50%), Gaps = 20/458 (4%)

Query: 102 LYAKFNRLDVAQKLFDGM--LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
           +YAK N+++ A  + +      R+   + +LI G++ +G  +  LG   +M ++    ++
Sbjct: 1   MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60

Query: 160 HTCSVILEA-CSLLEDRIFG-EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +T   +++  C ++E  +F  ++IH    K G + +++VG+SL+S Y  S   +EA  +F
Sbjct: 61  YTFPCLIKGLCEVME--VFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELF 118

Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVE 277
             +  +DV   N M+  Y + G  + A  V   +       + +T + V+SV       +
Sbjct: 119 DEIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFD 178

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY- 336
            G+ +HG  +K G    +SV NA++ MYGK     +A  +F+ ++E+++ SW +++S   
Sbjct: 179 NGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANE 238

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD- 395
           + S H G  +  F   L  G+  D   + T++  CS  + L  G ++HG+ I +G++ D 
Sbjct: 239 LCSDHDG-TLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDG 297

Query: 396 -------VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
                  ++   AL+D+YAK G ++ A M+    S + TA +N ++ G+      +E   
Sbjct: 298 ESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNE--A 355

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKTGYAADVIVGNALIT 507
           + +FS    +G++P+ +TF  +L   +    + +G + L    +K G    +     +I 
Sbjct: 356 LYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVID 415

Query: 508 MYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
           M  + G ++ A+++   +    + V W A+L+A  L+G
Sbjct: 416 MLGRAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYG 453



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 163/350 (46%), Gaps = 9/350 (2%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +H  + K G   D +  ++L++ Y K   +  A++LFD +  R  + W S++ GY   
Sbjct: 80  KKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRDVVLWNSMVNGYAQI 139

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G ++  LG+  +M +     ++ T S +L   +   D   G  +H F IK GF++ V V 
Sbjct: 140 GRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMIKMGFDSCVSVC 199

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +LI MY    C  +A  +F  +  KD+   N ++       + +    +F  +L    +
Sbjct: 200 NALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGTLRLFDRMLGDGVQ 259

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE--------ISVGNAIVTMYGKHG 309
            +  T T ++  C     +  G+++HG  +  G V++        +   NA++ MY K G
Sbjct: 260 LDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTINALMDMYAKCG 319

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              +A  +F  +S R+  SW  +I GY   G+G +A+  F +    G+  +      V+ 
Sbjct: 320 SMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSGLKPNEITFVGVLL 379

Query: 370 GCSVCSNLELGLQLHG-FAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            CS    +  G++  G   +KHG +  ++  T ++D+  + G L+ A  L
Sbjct: 380 ACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEAYKL 429



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 10/281 (3%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ +  G GD   G+ VH F++K G  +     N LI++Y K   +  A ++F+ M  + 
Sbjct: 167 VLSVFAGRGDFDNGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKD 226

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W S++       D++  L +   M     + +  T + IL ACS L   + G +IH 
Sbjct: 227 IFSWNSILSANELCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHG 286

Query: 184 FAIKSGF------EN--NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
           + I +GF      EN  N+    +L+ MY   G  R+A  VF  ++ +D    N MI+ Y
Sbjct: 287 YMIVNGFVKDGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGY 346

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVRE 294
              G    A ++F  +  S  +PN+ TF  V+  C     + +G +  G + +K GVV  
Sbjct: 347 GMHGYGNEALYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPT 406

Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
           I     ++ M G+ G  EEA ++   +  + N + W AL++
Sbjct: 407 IQHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVVWRALLA 447


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 170/555 (30%), Positives = 287/555 (51%), Gaps = 35/555 (6%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A +VF  +   ++   N M   +  + +   A  ++V ++S    PN YTF  ++  C +
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 273 NLGVEEGKQLHGLAVKFGVV-------------------------------REISVGNAI 301
               +EG Q+HG  +K G                                 R++    A+
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           VT Y   G  E A  MFD I  ++++SW A+ISGYV +G+  +A+  F E +   +  D 
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           S + TVI   +   ++ELG Q+H +   HG+ S++++  AL+D Y+K G++++A  L  G
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            S K    +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   A    + 
Sbjct: 256 LSYKDVISWNILIGGYTH--LNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAID 313

Query: 482 RGRSLHAYSIK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
            GR +H Y  K   G      +  +LI MY+KCG I+ A Q+F  +  + + +WNAM+  
Sbjct: 314 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFG 373

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           +A+HG    A  +F  M++    PDDI+ +G+L AC ++G+ + G  +F  +   Y + P
Sbjct: 374 FAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITP 433

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            LEH+ CM+DLLG +G   EA  +I++       ++W +L+   K+  N +     ++ L
Sbjct: 434 KLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNL 493

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
             +EP + GS++L+SN+YA  G  +E A++R  +ND  + K  GCS IEIDS +H F+  
Sbjct: 494 FKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIG 553

Query: 720 GKDHPESEEIYSKLD 734
            K HP + EIY  L+
Sbjct: 554 DKFHPRNREIYGMLE 568



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 215/483 (44%), Gaps = 47/483 (9%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           L   F  L  A  +F+ +   + + W ++ +G+    D  S L +   M       N +T
Sbjct: 6   LSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYT 65

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS-------------- 207
              +L++C+ L+    G QIH   +K G+E +++V TSLISMY  +              
Sbjct: 66  FPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSS 125

Query: 208 -----------------GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
                            G    A N+F  +  KDV   N MI  Y + G  + A  +F  
Sbjct: 126 HRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKE 185

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           ++ ++  P++ T   VIS    +  +E G+Q+H      G    + + NA++  Y K G 
Sbjct: 186 MMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGE 245

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
            E A  +F  +S +++ISW  LI GY       +A+  F E L  G   +   + +++  
Sbjct: 246 METACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHA 305

Query: 371 CSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
           C+    +++G  +H +  K   G  +   L T+L+D+Y+K GD+++A  + +    K   
Sbjct: 306 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLP 365

Query: 429 EFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL- 486
            +NA++ GF M   A+   D+   FS+ R   ++PD +TF  LLS  +    L  GR + 
Sbjct: 366 AWNAMIFGFAMHGRANAAFDI---FSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIF 422

Query: 487 ----HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYA 541
               H Y I       +     +I +    G    A ++   ++ + D V W ++L A  
Sbjct: 423 RSMTHNYKI----TPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACK 478

Query: 542 LHG 544
           +HG
Sbjct: 479 MHG 481



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 189/428 (44%), Gaps = 45/428 (10%)

Query: 30  NTFSPNPKSQVA-YLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLK 86
           +  SP+P S +  Y+C IS        LL N +  P L+K        K G  +H  +LK
Sbjct: 38  HALSPDPVSALKLYVCMIS------LGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLK 91

Query: 87  SGSQNDTFEANNLINLYAKFNRLDVAQK-------------------------------L 115
            G + D +   +LI++Y +  RL+ A K                               +
Sbjct: 92  LGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNM 151

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FD + V+  ++W ++I GY++ G+Y+  L +  +M ++  + +E T   ++ A +     
Sbjct: 152 FDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSI 211

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G Q+H++    GF +N+ +  +LI  Y   G    A  +F GL+YKDV   N +I  Y
Sbjct: 212 ELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGY 271

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
                 + A  +F  +L S   PND T  +++  C     ++ G+ +H    K   GV  
Sbjct: 272 THLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTN 331

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             S+  +++ MY K G  E A ++F+++  ++L +W A+I G+   G    A + F    
Sbjct: 332 ASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMR 391

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT--ALVDIYAKGGD 411
              I  D      ++  CS    L+LG  +   ++ H Y    +L     ++D+    G 
Sbjct: 392 KNEIKPDDITFVGLLSACSHAGMLDLGRHIFR-SMTHNYKITPKLEHYGCMIDLLGHSGL 450

Query: 412 LKSARMLL 419
            K A  ++
Sbjct: 451 FKEAEEMI 458



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 4/276 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++  S  SG ++LG+ VH+++   G  ++    N LI+ Y+K   ++ A  LF G+  + 
Sbjct: 201 VISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKD 260

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            I+W  LI GY     Y+  L +  +M RS E  N+ T   IL AC+ L     G  IH 
Sbjct: 261 VISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHV 320

Query: 184 FAIK--SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           +  K   G  N   + TSLI MY   G    A  VF  + +K +   N MI  +   G +
Sbjct: 321 YIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRA 380

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNA 300
             AF +F  +  ++ +P+D TF  ++S C     ++ G+ +   +   + +  ++     
Sbjct: 381 NAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGC 440

Query: 301 IVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
           ++ + G  G+ +EAE M   ++ E + + W +L+  
Sbjct: 441 MIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKA 476


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 169/551 (30%), Positives = 294/551 (53%), Gaps = 35/551 (6%)

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A +VF  +   +    N MI  +  + +   +  ++V ++S    PN YTF  ++  C +
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
           +    EG+Q+HG  +K G   ++ V  ++++MY ++   E+A ++FD  S R+++S+TAL
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 333 -------------------------------ISGYVRSGHGGKAINGFLEFLDLGICCDS 361
                                          ISGY  +G   +A+  F E + + +  D 
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           S   TV+  C+   ++ELG Q+H +   HG+ S++++  AL+D+Y+K G++++A  L  G
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            S K    +N ++ G+     +  ++ ++LF +   +G  P+ VT   +L   A    + 
Sbjct: 257 LSYKDVISWNTLIGGYTH--MNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAID 314

Query: 482 RGRSLHAYSIK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
            GR +H Y  K   G      +  +LI MYAKCG I+ A Q+F  +  + + SWNAM+  
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           +A+HG    +  LF  M++ G  PDDI+ +G+L AC +SG+ + G  +F  + Q Y + P
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            LEH+ CM+DLLG +G   EA  +IN+       ++W +L+   K+  N + +   ++ L
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           + +EP++  S+IL+SN+YA  G  ++ A++R  +N   + K  GCS IE+DS +  FV  
Sbjct: 495 IKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVG 554

Query: 720 GKDHPESEEIY 730
            K HP++ EIY
Sbjct: 555 DKFHPQNREIY 565



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 221/476 (46%), Gaps = 41/476 (8%)

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
           F+ L  A  +F+ +   + + W ++I+G+    D  S L +   M       N +T   +
Sbjct: 11  FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS------------------ 207
           L++C+  +    G+QIH   +K GF+ +++V TSLISMY  +                  
Sbjct: 71  LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130

Query: 208 -------------GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
                        G  R A+ +F  +  KDV   N MI  Y + G  + A  +F  ++  
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
           +  P++ T+  V+S C  +  +E G+Q+H      G    + + NA++ +Y K G  E A
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
             +F  +S +++ISW  LI GY       +A+  F E L  G   +   + +V+  C+  
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHL 310

Query: 375 SNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
             +++G  +H +  K   G  +   L T+L+D+YAK GD+++A  + +    K  + +NA
Sbjct: 311 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 370

Query: 433 ILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           ++ GF M   AD   D   LFS+ R  G+EPD +TF  LLS  +    L  GR +   S+
Sbjct: 371 MIFGFAMHGRADASFD---LFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFR-SM 426

Query: 492 KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
              Y     + +   +I +    G    A ++   +  + D V W ++L A  +HG
Sbjct: 427 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 482



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 177/390 (45%), Gaps = 42/390 (10%)

Query: 30  NTFSPNPKSQVA-YLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLK 86
           +  S +P S +  Y+C +S        LL N +  P L+K    S     GQ +H  +LK
Sbjct: 39  HALSSDPVSSLTLYVCMVS------LGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLK 92

Query: 87  SGSQNDTFEANNLINLYAKFNRLD-------------------------------VAQKL 115
            G   D +   +LI++Y +  RL+                                AQKL
Sbjct: 93  LGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKL 152

Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
           FD + V+  ++W ++I GY + G Y+  L +  +M +   + +E T   +L AC+     
Sbjct: 153 FDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSI 212

Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
             G Q+H++    GF++N+ +  +LI +Y   G    A  +F+GL+YKDV   N +I  Y
Sbjct: 213 ELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGY 272

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
                 + A  +F  +L S   PND T  +V+  C     ++ G+ +H    K   GV  
Sbjct: 273 THMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTN 332

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
             S+  +++ MY K G  E A ++F+++  ++L SW A+I G+   G    + + F    
Sbjct: 333 ASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 392

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQL 383
            +GI  D      ++  CS    L+LG  +
Sbjct: 393 KIGIEPDDITFVGLLSACSHSGMLDLGRHI 422



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 132/269 (49%), Gaps = 4/269 (1%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           SG ++LG+ VH+++   G  ++    N LI+LY+K   ++ A  LF G+  +  I+W +L
Sbjct: 209 SGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTL 268

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK--S 188
           I GY     Y+  L +  +M RS E  N+ T   +L AC+ L     G  IH +  K   
Sbjct: 269 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK 328

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
           G  N   + TSLI MY   G    A  VF  + +K +   N MI  +   G ++ +F +F
Sbjct: 329 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLF 388

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGK 307
             +     EP+D TF  ++S C  +  ++ G+ +   +   + +  ++     ++ + G 
Sbjct: 389 SRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGH 448

Query: 308 HGMSEEAERMFDAIS-ERNLISWTALISG 335
            G+ +EAE M + +  E + + W +L+  
Sbjct: 449 SGLFKEAEEMINTMEMEPDGVIWCSLLKA 477


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 199/680 (29%), Positives = 331/680 (48%), Gaps = 86/680 (12%)

Query: 92  DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
           +    N  I  + +  R+  A++LF  M  RS  T+ +++ GY  +G     L  A   +
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGR----LPQALSFF 161

Query: 152 RSEEKFNEHTCSVILEA----CSLLEDRIFGEQIHAFAIKSGFENNVFVGT--------- 198
           RS  + +  + + +L A     SL + R   +++    +K     NV + +         
Sbjct: 162 RSIPRPDSFSYNTLLHALGVSSSLADVRALFDEM---PVKDSVSYNVMISSHANHGLVSL 218

Query: 199 -----------------SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
                             +++ Y  +G  +EA  +F      D    N ++  Y +  + 
Sbjct: 219 ARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQI 278

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           E A  +F  +   D      ++  ++S       + E ++L  +A     +R++    AI
Sbjct: 279 EEAQKMFNKMPQRDV----VSWNTMVSGYARRGDMAEARRLFDVAP----IRDVFTWTAI 330

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           V+ Y ++GM EEA+R+FDA+ ++N +SW A+++ YV+     + +    E  D   C + 
Sbjct: 331 VSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQR----RMMEEAKELFDAMPCRNV 386

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
           +   T++ G                                   YA+ G L  AR +   
Sbjct: 387 ASWNTMLTG-----------------------------------YAQAGMLDEARAIFGM 411

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              K    + A+L+ +  +I   EE  + LF +    G   +   F+ +LS  A  A L 
Sbjct: 412 MPQKDAVSWAAMLAAY-SQIGFSEE-TLQLFKEMGRCGEWVNRSAFACVLSTCADIAALE 469

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G  LH+  IK GY     VGNAL+ MY KCGS++ A   F+ + +RD+VSWN M++ YA
Sbjct: 470 CGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYA 529

Query: 542 LHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
            HG GK AL +F+ M++    PDDI+++GVL AC +SGL E GI  F  + + +G+    
Sbjct: 530 RHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKP 589

Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD 661
           EH+ CM+DLLGRAGRL EA+NL+   PF     +W  L+  S++  NS+    A++++ +
Sbjct: 590 EHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFE 649

Query: 662 LEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGK 721
           LEP++AG ++L+SN+YA  G   +  K+R  M++  + K  G SWIE+ +K+H F     
Sbjct: 650 LEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDS 709

Query: 722 DHPESEEIYSKLDLLNDEMK 741
            HPE E+IY+ L+ L+  MK
Sbjct: 710 VHPEREDIYAFLEDLDIRMK 729



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 148/331 (44%), Gaps = 9/331 (2%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           Q D    N +++ YA+   +  A++LFD   +R   TWT+++ GY  +G    +L  A  
Sbjct: 290 QRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNG----MLEEAKR 345

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           ++ +    N  + + ++ A   ++ R+  E    F        NV    ++++ Y  +G 
Sbjct: 346 VFDAMPDKNAVSWNAMMAA--YVQRRMMEEAKELFDAMPC--RNVASWNTMLTGYAQAGM 401

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             EA  +F  +  KD      M+  Y++ G SE    +F  +       N   F  V+S 
Sbjct: 402 LDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLST 461

Query: 270 CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISW 329
           C +   +E G QLH   +K G      VGNA++ MY K G  EEA   F+ + ER+++SW
Sbjct: 462 CADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSW 521

Query: 330 TALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAI 388
             +I+GY R G G +A+  F          D   L  V+  CS    +E G+   +    
Sbjct: 522 NTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHR 581

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
             G  +     T ++D+  + G L  A  L+
Sbjct: 582 DFGVATKPEHYTCMIDLLGRAGRLDEAVNLM 612



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 9/155 (5%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G  +H+ L+K+G     F  N L+ +Y K   ++ A   F+ M  R  ++W ++I G
Sbjct: 468 LECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAG 527

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRI--FGEQIHAFAIKS 188
           Y   G  +  L +   M ++  K ++ T   +L ACS   L+E  I  F      F + +
Sbjct: 528 YARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVAT 587

Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
             E+     T +I +   +G   EA N+ + + ++
Sbjct: 588 KPEHY----TCMIDLLGRAGRLDEAVNLMKDMPFE 618


>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
 gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
          Length = 606

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 178/546 (32%), Positives = 291/546 (53%), Gaps = 8/546 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC-FREAENVFRGLAYK 223
           +L+ C+       G Q H+ AIKSG + + FVG SL+++YF  G    EA  VF GL YK
Sbjct: 66  LLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYK 125

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           D+     MI  Y K  + + +  +F+ +L    EPN +T + VI  C     +  GK  H
Sbjct: 126 DLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFH 185

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           G+ +  G      +  A++ MYG++   ++A  +F  + + + I WT++IS + R+    
Sbjct: 186 GVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYD 245

Query: 344 KAINGFLEFL-DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
           KA+  F       G+  D     TV+  C     L+ G ++H   I  G   +V + ++L
Sbjct: 246 KALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSL 305

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y K   +  ++ + D  S K    + A+L G+ +    D E V+ +F +    G + 
Sbjct: 306 VDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQN--GDFESVIRIFRE----GKKV 359

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
           D  +F  +L   A  A + +G+ +H   +K     DV+  +AL+ +YAKCG ID A++IF
Sbjct: 360 DTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIF 419

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSE 582
             +S R++++WN+M+  +A +G G     LF+EM  EG  PD IS +GVL AC ++GL +
Sbjct: 420 VRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVD 479

Query: 583 GGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
            G   F  + ++Y ++P +EH+ CM+DLLGRAG L EA NLI ++   + P LW  L+  
Sbjct: 480 QGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGA 539

Query: 643 SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEA 702
                +S  +   +K+ ++L+P    S++ ++N+Y   G  D+A K+R  M    + K  
Sbjct: 540 CAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMP 599

Query: 703 GCSWIE 708
           G SWIE
Sbjct: 600 GTSWIE 605



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 233/475 (49%), Gaps = 22/475 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFN-RLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           G   H+  +KSG   D F  N+L+ LY K    L  A+++FDG+  +  I+WTS+I GY+
Sbjct: 79  GIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYV 138

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
                +  L +  +M     + N  T S +++ACS L D   G+  H   +  GF+ N  
Sbjct: 139 KVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDV 198

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           + T+LI MY  +    +A  VF  L   D  C   +I  + +    + A   F  +    
Sbjct: 199 ISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKH 258

Query: 256 -FEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
              P+ +TF  V++ C  NLG +++GK++H   +  G+   + V +++V MYGK  +  +
Sbjct: 259 GLSPDGFTFGTVLTAC-GNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQ 317

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           ++ +FD +S +NL+SWTAL+ GY ++G     I  F E    G   D+    TV+  C+ 
Sbjct: 318 SQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFRE----GKKVDTYSFGTVLRACAG 373

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
            + +  G ++H   +K     DV   +ALVD+YAK G +  A  +    S +    +N++
Sbjct: 374 LAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSM 433

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV-RGRSLHA---- 488
           + GF +     E  V  LF +    G+ PD ++F  +L  + S A LV +G+   A    
Sbjct: 434 IYGFAQNGRGGE--VFQLFDEMIEEGIRPDYISFVGVL-FACSHAGLVDQGKKYFAAMTE 490

Query: 489 -YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYA 541
            Y IK G    +   N +I +  + G ++ A  + +  + RD  S W  +L A A
Sbjct: 491 VYEIKPG----IEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACA 541



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 183/348 (52%), Gaps = 8/348 (2%)

Query: 230 FMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF 289
           + I++Y K+G    A HV   +  +      + + +++  C + +    G Q H  A+K 
Sbjct: 30  YKIIQYCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKS 89

Query: 290 GVVREISVGNAIVTMYGKHGMSE-EAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
           G+  +  VGN+++ +Y K G +  EA R+FD +  ++LISWT++I+GYV+     K++  
Sbjct: 90  GLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLEL 149

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYA 407
           FLE L LGI  +   L+ VI  CS   +L LG   HG  +  G+ L+DV + TAL+D+Y 
Sbjct: 150 FLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDV-ISTALIDMYG 208

Query: 408 KGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF 467
           +   +  A ++           + +I+S F      D+  +   +S  R  G+ PD  TF
Sbjct: 209 RNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKA-LGFFYSMCRKHGLSPDGFTF 267

Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
             +L+   +   L +G+ +HA  I +G + +V V ++L+ MY KC  ++ +  +F  +S 
Sbjct: 268 GTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSV 327

Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
           +++VSW A+L  Y  +G  +  + +F    REG   D  S   VL+AC
Sbjct: 328 KNLVSWTALLGGYCQNGDFESVIRIF----REGKKVDTYSFGTVLRAC 371



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 181/382 (47%), Gaps = 20/382 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K   G GDL+LG+  H  ++  G   +   +  LI++Y + + +D A  +F  +    
Sbjct: 168 VIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPD 227

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRIFGE 179
           AI WTS+I  +  +  Y+  LG    M R    S + F   T   +L AC  L     G+
Sbjct: 228 AICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGF---TFGTVLTACGNLGRLKQGK 284

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           ++HA  I SG   NVFV +SL+ MY       +++ VF  ++ K++     ++  Y + G
Sbjct: 285 EVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNG 344

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           + E    +F      D     Y+F  V+  C     V +GK++H   VK    R++   +
Sbjct: 345 DFESVIRIFREGKKVD----TYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTES 400

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+V +Y K G  + A R+F  +S RNLI+W ++I G+ ++G GG+    F E ++ GI  
Sbjct: 401 ALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRP 460

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHG-----FAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
           D      V+  CS    ++ G +        + IK G    +     ++D+  + G L+ 
Sbjct: 461 DYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPG----IEHYNCMIDLLGRAGLLEE 516

Query: 415 ARMLLDGFSCKYTAEFNAILSG 436
           A  L++  +C+       +L G
Sbjct: 517 AENLIENANCRDEPSLWTVLLG 538



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 143/279 (51%), Gaps = 12/279 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G LK G+ VHA ++ SG   + F  ++L+++Y K   ++ +Q +FD M V++ ++WT+L+
Sbjct: 278 GRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALL 337

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +GD+ESV+ I    +R  +K + ++   +L AC+ L     G+++H   +K    
Sbjct: 338 GGYCQNGDFESVIRI----FREGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCW 393

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            +V   ++L+ +Y   GC   A  +F  ++ +++   N MI  + + G     F +F  +
Sbjct: 394 RDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEM 453

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG----NAIVTMYGK 307
           +     P+  +F  V+  C     V++GK+      +   V EI  G    N ++ + G+
Sbjct: 454 IEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTE---VYEIKPGIEHYNCMIDLLGR 510

Query: 308 HGMSEEAERMFDAISERNLIS-WTALISGYVRSGHGGKA 345
            G+ EEAE + +  + R+  S WT L+     S H   A
Sbjct: 511 AGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATA 549


>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
 gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
          Length = 967

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 164/479 (34%), Positives = 268/479 (55%), Gaps = 22/479 (4%)

Query: 282 LHGLAVKFGVVREISVGNAIVTM----------YGKHGMS----------EEAERMFDAI 321
           LH LA++ G   +    NA++ +          +G +G S          E   ++FD +
Sbjct: 388 LHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEM 447

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
            ER+ +SW  LI G        +A++   E    G   D+  L+TV+   + C++++ G+
Sbjct: 448 LERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGM 507

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
            +HG+AIK+G+ +DV +G++L+D+YA    +  +  + D FS      +N++L+G+ +  
Sbjct: 508 VVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQN- 566

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
               E+ + +F +   AG+ P PVTFS L+    + + L  G+ LHAY I+  +  ++ +
Sbjct: 567 -GSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFI 625

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            ++LI MY KCG++D A ++F GI   DIVSW AM+  YALHG    A +LFE M+    
Sbjct: 626 SSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNV 685

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            P+ I+ L VL AC ++GL + G   FN +   YG  P LEH A + D LGRAG L EA 
Sbjct: 686 KPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAY 745

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
           N I+      +  +W TL+   ++  N+  +   +K++ +LEPK  GS +++SNMY+  G
Sbjct: 746 NFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASG 805

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
             +EAA++R +M    + KE  CSWIE+ +KLH F+A  K HP  + I   L++ +++M
Sbjct: 806 RWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQM 864



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 150/567 (26%), Positives = 251/567 (44%), Gaps = 45/567 (7%)

Query: 38  SQVAYLCSIS-----SVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQND 92
           SQ  +L +IS       S + R+ +    P  +K   G G   L  ++HA  ++SGS  D
Sbjct: 341 SQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFAD 400

Query: 93  TFEANNLINLYAKFNRL--------------------DVAQKLFDGMLVRSAITWTSLIK 132
            F AN L+NL  K                        +  +K+FD ML R A++W +LI 
Sbjct: 401 RFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLIL 460

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           G  +   ++  L +  +M+R     +  T S +L   +   D   G  +H +AIK+GF+N
Sbjct: 461 GCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDN 520

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +VFVG+SLI MY +      +  VF   +  D    N M+  Y + G  E A  +F  +L
Sbjct: 521 DVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRML 580

Query: 253 SSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
            +   P   TF+++I   + NL  +  GKQLH   ++      I + ++++ MY K G  
Sbjct: 581 QAGVRPVPVTFSSLIPA-FGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNV 639

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-ICCDSSCLATVIDG 370
           + A R+F+ I   +++SWTA+I GY   G   +A   F E ++LG +  +      V+  
Sbjct: 640 DIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLF-ERMELGNVKPNHITFLAVLTA 698

Query: 371 CSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
           CS    ++ G +  +  + ++G++  +    AL D   + GDL  A   +     K T  
Sbjct: 699 CSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPT-- 756

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP----VTFSRLLSLSA--SQACLVRG 483
            +++ S  +      +  V+     +++  +EP      V  S + S S   ++A  +R 
Sbjct: 757 -SSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLR- 814

Query: 484 RSLHAYSIKTGYAADVI-VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           +S+    +K   A   I V N L    A     D +   +  I D   V    M+    +
Sbjct: 815 KSMRIKGMKKEPACSWIEVKNKLHVFIAH----DKSHPWYDRIIDALNVYSEQMIRQGYV 870

Query: 543 HGLGKGALLLFEEMKREGFAPDDISIL 569
             +      + EE KREG  P D S +
Sbjct: 871 PNMEDVLQDIEEEQKREGQPPLDASAI 897



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/443 (21%), Positives = 198/443 (44%), Gaps = 28/443 (6%)

Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV--ILEACSLLEDRIFGEQIHA 183
           +W   I+     G +   + +   M  S    +    S+   L++C+ L        +HA
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 390

Query: 184 FAIKSGFENNVFVGTSLISMY-----FH---------------SGCFREAENVFRGLAYK 223
            AI+SG   + F   +L+++      FH               S  +     VF  +  +
Sbjct: 391 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 450

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
           D    N +IL   +    + A  +   +    F P+ +T + V+ +  E   ++ G  +H
Sbjct: 451 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 510

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           G A+K G   ++ VG++++ MY      + + ++FD+ S+ + + W ++++GY ++G   
Sbjct: 511 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 570

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
           +A+  F   L  G+       +++I      S L LG QLH + I+  +  ++ + ++L+
Sbjct: 571 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLI 630

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D+Y K G++  AR + +G        + A++ G+   +     +  VLF +  L  ++P+
Sbjct: 631 DMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGY--ALHGPTTEAFVLFERMELGNVKPN 688

Query: 464 PVTFSRLLSLSASQACLVRG--RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
            +TF  +L+ + S A LV    +  ++ S + G+   +    AL     + G +D A+  
Sbjct: 689 HITFLAVLT-ACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNF 747

Query: 522 FKGISDRDIVS-WNAMLSAYALH 543
              +  +   S W+ +L A  +H
Sbjct: 748 ISEMKIKPTSSVWSTLLRACRVH 770


>gi|297841909|ref|XP_002888836.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297334677|gb|EFH65095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 744

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 184/600 (30%), Positives = 314/600 (52%), Gaps = 30/600 (5%)

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF--ENNVFVGTSLISMYFHSGCFREAEN 215
           ++H  + + +AC+   +   G  +H   +   +    NV +   LI+MY   G    A  
Sbjct: 58  SQHAYAALFQACADQRNLRDGINLHHHMLSHPYCYSQNVILANYLITMYAKCGNILYARQ 117

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
           VF  +  ++V     +I  Y +AG  +  F +F  +L+    PN++  ++V+++C     
Sbjct: 118 VFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSMLAHCC-PNEFALSSVLTLCR---- 172

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGK---HGMSEEAERMFDAISERNLISWTAL 332
            E GKQ+HGLA+K G+   I V NA+++MYG+      + EA  +F+A+  +NL++W ++
Sbjct: 173 YEPGKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAAYEAWTVFEAMEFKNLVTWNSM 232

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV---CSNLE------LGLQL 383
           I+ +     G +AI  F+     G+  D    ATV++ C+     S+L+        LQL
Sbjct: 233 IAAFQCCNLGKQAIGVFMRMHSDGVGFDR---ATVLNICTTLYKSSDLDPDQVSKCCLQL 289

Query: 384 HGFAIKHGYLSDVRLGTALVDIYAK--GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           H   +K G ++   + TALV +Y++  G      ++ ++   C+    +  I++ F    
Sbjct: 290 HSLTVKSGLVTQTEVATALVKVYSEILGEFTDCYKLFMEMSHCRDIVAWTGIITAFA--- 346

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
             D E  ++LF Q R   + PD  TFS +L   A         S+HA  IK G+A D +V
Sbjct: 347 VYDPERAILLFGQLRHEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFATDTVV 406

Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
            N+LI  YAKCGS+D   ++F  +  RD+VSWN++L AY+LHG     L +F++M     
Sbjct: 407 NNSLIHAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYSLHGQVDSILPVFQKMD---I 463

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAM 621
            PD  + + +L AC ++G  + G+ +F  + +     P L H+AC++D+LGRA R +EA 
Sbjct: 464 KPDSATFIALLSACSHAGRVKEGLRIFRSMFEKPETLPQLNHYACVIDMLGRAERFAEAE 523

Query: 622 NLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQG 681
            +I   P     ++W TL+   +   N++   LA+ +L ++EP ++ S+I +SN+Y  + 
Sbjct: 524 EVIKQMPMGPDAVVWSTLLGSCRKHGNTQLGKLAADKLKEIEPTNSLSYIQMSNIYNAES 583

Query: 682 MLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
             +E  K    M   R+ KE G S  EI +K+H F + G+  P+ E I  +L+ L   +K
Sbjct: 584 SFNEGNKSIKEMETWRVRKEPGLSCTEIGNKVHEFTSGGRCRPDREAICRELERLISRLK 643



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 228/516 (44%), Gaps = 55/516 (10%)

Query: 73  DLKLGQAVHAFLLKSG---SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           +L+ G  +H  +L      SQN    AN LI +YAK   +  A+++FD M  R+ ++WT+
Sbjct: 74  NLRDGINLHHHMLSHPYCYSQN-VILANYLITMYAKCGNILYARQVFDTMPERNVVSWTA 132

Query: 130 LIKGYLDDGD-------YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           LI GY   G+       + S+L   C         NE   S +L  C        G+Q+H
Sbjct: 133 LITGYAQAGNEQDGFCLFSSMLAHCCP--------NEFALSSVLTLCRYEP----GKQVH 180

Query: 183 AFAIKSGFENNVFVGTSLISMY--FHSG-CFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
             A+K G   +++V  +LISMY   H G    EA  VF  + +K++   N MI  +    
Sbjct: 181 GLALKLGLYCSIYVANALISMYGRCHDGTAAYEAWTVFEAMEFKNLVTWNSMIAAFQCCN 240

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK------QLHGLAVKFGVVR 293
             + A  VF+ + S     +  T  N+ +  Y++  ++  +      QLH L VK G+V 
Sbjct: 241 LGKQAIGVFMRMHSDGVGFDRATVLNICTTLYKSSDLDPDQVSKCCLQLHSLTVKSGLVT 300

Query: 294 EISVGNAIVTMYGK-HGMSEEAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLE 351
           +  V  A+V +Y +  G   +  ++F  +S  R++++WT +I+ +       +AI  F +
Sbjct: 301 QTEVATALVKVYSEILGEFTDCYKLFMEMSHCRDIVAWTGIITAFAVYD-PERAILLFGQ 359

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
                +  D    ++V+  C+        L +H   IK G+ +D  +  +L+  YAK G 
Sbjct: 360 LRHEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFATDTVVNNSLIHAYAKCGS 419

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           L   + + D    +    +N++L  +   +    + ++ +F +     ++PD  TF  LL
Sbjct: 420 LDLCKRVFDDMDSRDVVSWNSLLKAY--SLHGQVDSILPVFQKM---DIKPDSATFIALL 474

Query: 472 SLSASQACLVRGRSLHAYSI------KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
           S     AC   GR      I      K      +     +I M  +      A ++ K +
Sbjct: 475 S-----ACSHAGRVKEGLRIFRSMFEKPETLPQLNHYACVIDMLGRAERFAEAEEVIKQM 529

Query: 526 S-DRDIVSWNAMLSAYALHG---LGKGALLLFEEMK 557
               D V W+ +L +   HG   LGK A    +E++
Sbjct: 530 PMGPDAVVWSTLLGSCRKHGNTQLGKLAADKLKEIE 565



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 29/176 (16%)

Query: 60  DW---PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           DW     ++K   G    +   ++HA ++K G   DT   N+LI+ YAK   LD+ +++F
Sbjct: 368 DWYTFSSVLKACAGLVTARHALSIHAQVIKGGFATDTVVNNSLIHAYAKCGSLDLCKRVF 427

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           D M  R  ++W SL+K Y   G  +S+L +     + + K +  T   +L ACS      
Sbjct: 428 DDMDSRDVVSWNSLLKAYSLHGQVDSILPV---FQKMDIKPDSATFIALLSACS------ 478

Query: 177 FGEQIHAFAIKSGFE--NNVFVGTSLISMYFHSGC----------FREAENVFRGL 220
                HA  +K G     ++F     +    H  C          F EAE V + +
Sbjct: 479 -----HAGRVKEGLRIFRSMFEKPETLPQLNHYACVIDMLGRAERFAEAEEVIKQM 529


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 211/729 (28%), Positives = 363/729 (49%), Gaps = 20/729 (2%)

Query: 31  TFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSG-- 88
           T + N  + +  L SI+  S  ++ L  +  P  +K +    D +  +A+HA  L+ G  
Sbjct: 31  TAAGNHAAALRALSSITMAS-PQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLL 89

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGML--VRSAITWTSLIKGYLDDGDYESVLGI 146
            +     AN L+  YA+  RL  A ++F  +      A+++ SLI        ++  L  
Sbjct: 90  HRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAA 149

Query: 147 ACDMYRSEEKFNEHTCSVILEACSLLEDRI----FGEQIHAFAIKSGF--ENNVFVGTSL 200
              M          T   +L A S L         G + HAFA+K+G    +  F   +L
Sbjct: 150 LRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNAL 209

Query: 201 ISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +SMY   G   +A+ +F G      DV   N M+    ++G  + A      +++    P
Sbjct: 210 LSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRP 269

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERM 317
           +  TF + +  C     ++ G+++H   +K   +   S V +A+V MY  H    +A ++
Sbjct: 270 DGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQV 329

Query: 318 FDAI--SERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVC 374
           FD +  S + L  W A+I GY ++G   +A+  F     + G     + +A+V+  C+  
Sbjct: 330 FDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARS 389

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
                   +HG+ +K G   +  +  AL+D+YA+ G    AR +           +N ++
Sbjct: 390 EAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLI 449

Query: 435 SG-FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +G  ++    D   +     Q    G+ P+ +T   LL   A  A   RG+ +H Y+++ 
Sbjct: 450 TGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRH 509

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
               DV VG+AL+ MYAKCG +  +  +F  +  R+ ++WN ++ AY +HGLG  A +LF
Sbjct: 510 ALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLF 569

Query: 554 EEMKREGFA-PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           + M   G A P++++ +  L AC +SG+ + G+ LF+ +E+ +G+ P  +  AC+VD+LG
Sbjct: 570 DRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILG 629

Query: 613 RAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           RAGRL EA  ++ S    E  +  W T++   +L  N     +A +RLL+LEP++A  ++
Sbjct: 630 RAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYV 689

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+ N+Y+  G    AA+VR+ M    ++KE GCSWIE+D  +H F+A    HP SEE+++
Sbjct: 690 LLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHA 749

Query: 732 KLDLLNDEM 740
            ++ L  EM
Sbjct: 750 HMEALWGEM 758


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 167/510 (32%), Positives = 277/510 (54%), Gaps = 4/510 (0%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N  + E  K  +   A  ++  +L     PN +TF   +  C        G Q HG   K
Sbjct: 18  NTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITK 77

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDA--ISERNLISWTALISGYVRSGHGGKAI 346
            G V E  V   +++MY K  + + A ++F+    S +  + + AL+SGYV +    +A+
Sbjct: 78  VGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAV 137

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
             F +  + G+  +S  L  +I  C    NLELG  LH   +K+G+ SDV +    + +Y
Sbjct: 138 LLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMY 197

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
            K G +  A+ L D    K    +NA++SG+ +       +V+ L+    + G+ PDPVT
Sbjct: 198 MKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQN--GLATNVLELYRNMDMNGVHPDPVT 255

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
              +LS  A+      G  +      +G+ ++  + NALI MYA+CG++  A  +F G+ 
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 315

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           +R +VSW A++  Y +HG G+ A+ LF+EM R G  PD  + + VL AC ++GL++ G+ 
Sbjct: 316 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 375

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
            F  +++ Y L P  EH++CMVDLLGRAGRL EA  LI S P      +W  L+   K+ 
Sbjct: 376 YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIH 435

Query: 647 ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
            N + + LA +R+++LEP++ G ++L+SN+Y+         ++R  M + +L K+ GCS+
Sbjct: 436 KNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSY 495

Query: 707 IEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           +E+  ++H F+   ++H +S+EIY  L+ L
Sbjct: 496 VELKGRVHPFIVGDRNHLQSDEIYRVLEEL 525



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 199/460 (43%), Gaps = 11/460 (2%)

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +  W + ++       +   L +   M R  ++ N  T    L++C+ L   I G Q H 
Sbjct: 14  STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 73

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG--LAYKDVRCVNFMILEYNKAGES 241
              K G     FV T LISMY        A  VF     + K   C N ++  Y    + 
Sbjct: 74  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 133

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A  +F  +       N  T   +I  C   + +E G  LH   +K+G   ++SV N  
Sbjct: 134 SEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCF 193

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           +TMY K G    A+++FD +  + LISW A++SGY ++G     +  +      G+  D 
Sbjct: 194 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 253

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             L  V+  C+      +G ++       G+ S+  L  AL+++YA+ G+L  A+ + DG
Sbjct: 254 VTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDG 313

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              +    + AI+ G+   +    E  + LF +   +G+EPD   F  +LS + S A L 
Sbjct: 314 MPERTLVSWTAIIGGY--GMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS-ACSHAGLT 370

Query: 482 RGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLS 538
                +   +K  Y  +    +   ++ +  + G +  A  + + +  + D   W A+L 
Sbjct: 371 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 430

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
           A  +H   + A L FE +      P++I    VL + IYS
Sbjct: 431 ACKIHKNVELAELAFERVIE--LEPENIGYY-VLLSNIYS 467



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 182/407 (44%), Gaps = 8/407 (1%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT--WTSLIKG 133
           LG   H  + K G   + F    LI++Y K + +D A+K+F+       +T  + +L+ G
Sbjct: 67  LGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSG 126

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+ +      + +   M       N  T   ++ AC    +   G  +H   +K GF+++
Sbjct: 127 YVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSD 186

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V V    I+MY   G    A+ +F  +  K +   N M+  Y + G +     ++ ++  
Sbjct: 187 VSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDM 246

Query: 254 SDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +   P+  T   V+S C  NLG +  G ++       G      + NA++ MY + G   
Sbjct: 247 NGVHPDPVTLVGVLSSC-ANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLT 305

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A+ +FD + ER L+SWTA+I GY   GHG  A+  F E +  GI  D +    V+  CS
Sbjct: 306 KAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 365

Query: 373 VCSNLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
                + GL+      ++  L       + +VD+  + G LK A+ L++    K      
Sbjct: 366 HAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 425

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
             L G   KI  + E   + F  +R+  +EP+ + +  LLS   S A
Sbjct: 426 GALLGAC-KIHKNVELAELAF--ERVIELEPENIGYYVLLSNIYSNA 469



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 145/306 (47%), Gaps = 22/306 (7%)

Query: 46  ISSVSCSERTLLFNDWPQ------------LVKISIGSGDLKLGQAVHAFLLKSGSQNDT 93
           +S+  CSE  LLF    +            L+   +   +L+LG ++H   LK G  +D 
Sbjct: 128 VSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDV 187

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
              N  I +Y K   ++ AQKLFD M V+  I+W +++ GY  +G   +VL    ++YR+
Sbjct: 188 SVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVL----ELYRN 243

Query: 154 EEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
            +    H   V    +L +C+ L  +  G ++      SGF +N F+  +LI+MY   G 
Sbjct: 244 MDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGN 303

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             +A+ VF G+  + +     +I  Y   G  E+A  +F  ++ S  EP+   F  V+S 
Sbjct: 304 LTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSA 363

Query: 270 CYENLGVEEGKQLHGLAVK-FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLI 327
           C      ++G +   +  + + +       + +V + G+ G  +EA+ + +++  + +  
Sbjct: 364 CSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGA 423

Query: 328 SWTALI 333
            W AL+
Sbjct: 424 VWGALL 429


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 178/647 (27%), Positives = 322/647 (49%), Gaps = 3/647 (0%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
           + +L+   A   R+D A +    +    A     +I+G+ D G     L     M     
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
           + +  T  V+++ C+ L     G   H   IK G E++V+   SL++ Y   G   +AE 
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENL 274
           VF G+  +D+   N M+  Y   G   +A   F  +  + + + +       ++ C    
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223

Query: 275 GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALIS 334
              +GK++HG  ++ G+ ++I VG +++ MY K G    A  +F  +  R +++W  +I 
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIG 283

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS 394
           GY  +    +A + F++    G+  +      ++  C+   +   G  +HG+ ++  +L 
Sbjct: 284 GYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLP 343

Query: 395 DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
            V L TAL+++Y K G ++S+  +    + K    +N +++ +M K  +   + + LF +
Sbjct: 344 HVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYK--EMYTEAITLFLE 401

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
                + PD  T S ++        L   R +H+Y I  GYA + ++ NA++ MYA+ G 
Sbjct: 402 LLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGD 461

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           +  + +IF  +  +D++SWN M+  YA+HG GK AL +F+EMK  G  P++ + + VL A
Sbjct: 462 VVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTA 521

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C  SGL + G   FN + Q YG+ P +EH+ CM DLLGR G L E +  I S P   +  
Sbjct: 522 CSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSR 581

Query: 635 LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
           +W +L++ S+   +   +  A++R+  LE  + G +I++S+MYA  G  ++  +VR  M 
Sbjct: 582 VWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMK 641

Query: 695 DLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +  L +    S +E+ S    F      H +S  I+   D+L+ ++K
Sbjct: 642 EKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIK 688



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 218/427 (51%), Gaps = 14/427 (3%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +VK     G L  G+A H  ++K G ++D +  N+L+  YAK   ++ A+++FDGM 
Sbjct: 110 FPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP 169

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIAC--DMYRSEEKFNEHTCSVI--LEACSLLEDRI 176
           VR  +TW  ++ GY+ +G     L +AC  +M+ + E     +  +I  L AC L    +
Sbjct: 170 VRDIVTWNIMVDGYVSNG--LGSLALACFQEMHDALE-VQHDSVGIIAALAACCLEFSSM 226

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G++IH + I+ G E ++ VGTSL+ MY   G    A +VF  +  + V   N MI  Y 
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
                + AF  F+ + +   +    T  N+++ C +      G+ +HG  V+   +  + 
Sbjct: 287 LNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVV 346

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           +  A++ MYGK G  E +E++F  I+ + L+SW  +I+ Y+      +AI  FLE L+  
Sbjct: 347 LETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQP 406

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D   ++TV+    +  +L    Q+H + I  GY  +  +  A++ +YA+ GD+ ++R
Sbjct: 407 LYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASR 466

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
            + D    K    +N ++ G+   I    +  + +F + +  G++P+  TF  +L+    
Sbjct: 467 EIFDKMVSKDVISWNTMIMGY--AIHGQGKTALEMFDEMKYNGLQPNESTFVSVLT---- 520

Query: 477 QACLVRG 483
            AC V G
Sbjct: 521 -ACSVSG 526


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 276/481 (57%), Gaps = 4/481 (0%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  +++ C     + EG+++H   +K   +  + +   ++ +Y K     +A  MFD + 
Sbjct: 93  YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ++N++SWTA+IS Y + G   +A+N F+E L      +    AT++  C      E G Q
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 212

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H  AIK  Y S + +G++L+D+YAK G +  A  +      +      AI+SG+ +   
Sbjct: 213 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGL 272

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D+E   + LF Q ++ GM  + VT++ +L+  +  A L  G+ +H++ +++G  + V++ 
Sbjct: 273 DEE--ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLL 330

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-F 561
           N+LI MY+KCG++  A +IF  + +R  +SWNAML  Y+ HG+ +  L LF+ M+ E   
Sbjct: 331 NSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKV 390

Query: 562 APDDISILGVLQACIYSGLSEGGICLF-NEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
            PD I+ L VL  C +  L + G+ +F N +    G+ P + H+ C+VDLLGRAGR+ EA
Sbjct: 391 KPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 450

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
            + I   PF  +  +W +L+   ++ ++ +  I+  ++LL+LEP++AG+++++SN+YA  
Sbjct: 451 FDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASA 510

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
           G  ++   +R  M +  ++KE G SW+E+D  +H F AS   HP  EE+  K+  L+ + 
Sbjct: 511 GKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKF 570

Query: 741 K 741
           K
Sbjct: 571 K 571



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 191/370 (51%), Gaps = 6/370 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+++H   IK+ +  +V++ T LI +Y    C  +A  +F  +  K+V     MI  Y++
Sbjct: 109 GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQ 168

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G +  A ++FV +L SD EPN +TF  +++ CY +LG E G+Q+H +A+K      + V
Sbjct: 169 RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFV 228

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G++++ MY K G   +A  +F  + ER++++ TA+ISGY + G   +A+  F +    G+
Sbjct: 229 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 288

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +S   A+V+   S  + L  G Q+H   ++ G  S V L  +L+D+Y+K G++  AR 
Sbjct: 289 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 348

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG-MEPDPVTFSRLLSLSAS 476
           + D    +    +NA+L G+ +     E  V+ LF   R    ++PD +T+  +LS  + 
Sbjct: 349 IFDSMPERTCISWNAMLVGYSKHGMARE--VLELFKLMREENKVKPDSITYLAVLSGCSH 406

Query: 477 QACLVRGRSLHAYSI--KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-W 533
                 G  +    +  K G   D+     ++ +  + G ++ AF   K +      + W
Sbjct: 407 GQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIW 466

Query: 534 NAMLSAYALH 543
            ++L +  +H
Sbjct: 467 GSLLGSCRVH 476



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 209/443 (47%), Gaps = 15/443 (3%)

Query: 31  TFSPNPKSQVAYLCS-------ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAF 83
           +FSP+P  +   LCS       +  ++   R + F  +  ++   +    ++ GQ VH  
Sbjct: 58  SFSPSPNLKT--LCSSGQLKEALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTH 115

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           ++K+      +    LI LY K + L  A+++FD M  ++ ++WT++I  Y   G     
Sbjct: 116 MIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEA 175

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
           L +  +M RS+ + N  T + IL +C        G QIH+ AIK  +E+++FVG+SL+ M
Sbjct: 176 LNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDM 235

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y  SG   +A  VF  L  +DV     +I  Y + G  E A  +F  L       N  T+
Sbjct: 236 YAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTY 295

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
            +V++       +  GKQ+H   ++ G    + + N+++ MY K G    A R+FD++ E
Sbjct: 296 ASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPE 355

Query: 324 RNLISWTALISGYVRSGHGGKAINGF-LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           R  ISW A++ GY + G   + +  F L   +  +  DS     V+ GCS     ++GL+
Sbjct: 356 RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLE 415

Query: 383 LHGFAI--KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
           +    +  K G   D+     +VD+  + G ++ A   +       TA     L G    
Sbjct: 416 IFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRV 475

Query: 441 IADDEEDVMVLFSQQRLAGMEPD 463
            +D E  ++V    Q+L  +EP+
Sbjct: 476 HSDVEIGIIV---GQKLLELEPE 495



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 7/178 (3%)

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
           Q  + G E     +  +L+   SQ  +  G+ +H + IKT Y   V +   LI +Y KC 
Sbjct: 80  QMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCD 139

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
            +  A ++F  +  +++VSW AM+SAY+  G    AL LF EM R    P+  +   +L 
Sbjct: 140 CLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILT 199

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHF---ACMVDLLGRAGRLSEAMNLINSSP 628
           +C  S   E G     +I  I   R    H    + ++D+  ++GR+ +A  + +  P
Sbjct: 200 SCYGSLGFETG----RQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253


>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
 gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 158/491 (32%), Positives = 284/491 (57%), Gaps = 5/491 (1%)

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
           ++ +C  N  V E K  HG  ++  +  ++++ N ++  Y K G  E A ++FD + ER+
Sbjct: 59  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV-CSNLELGLQLH 384
           L+SW  +I  Y R+    +A++ FLE  + G       +++V+  C V C  LE   +LH
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK-KLH 177

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
             ++K     ++ +GTAL+D+YAK G +K A  + +    K +  ++++++G+++    +
Sbjct: 178 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN--KN 235

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
            E+ ++L+ + +   +E +  T S ++   ++ A L+ G+ +HA   K+G+ ++V V ++
Sbjct: 236 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 295

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
            + MYAKCGS+  ++ IF  + ++++  WN ++S +A H   K  ++LFE+M+++G  P+
Sbjct: 296 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 355

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
           +++   +L  C ++GL E G   F  +   YGL P + H++CMVD+LGRAG LSEA  LI
Sbjct: 356 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 415

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
            S PF  +  +W +L++  ++  N + + +A+++L +LEP++AG+ +L+SN+YA     +
Sbjct: 416 KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWE 475

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD-LLNDEMKLK 743
           E AK R  + D  + K  G SWI+I  K+H F      HP   EI S LD L+    K  
Sbjct: 476 EIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 535

Query: 744 VKDSSAFELQD 754
            K S   EL D
Sbjct: 536 YKPSVEHELHD 546



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 200/389 (51%), Gaps = 4/389 (1%)

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
           S E  N +    IL+ C+     +  +  H   I+   E +V +   LI+ Y   G    
Sbjct: 47  SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL 106

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF G+  + +   N MI  Y +      A  +F+ + +  F+ +++T ++V+S C  
Sbjct: 107 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 166

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
           N    E K+LH L+VK  +   + VG A++ +Y K GM ++A ++F+++ +++ ++W+++
Sbjct: 167 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 226

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           ++GYV++ +  +A+  +     + +  +   L++VI  CS  + L  G Q+H    K G+
Sbjct: 227 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 286

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
            S+V + ++ VD+YAK G L+ + ++      K    +N I+SGF +     E  VM+LF
Sbjct: 287 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKE--VMILF 344

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAK 511
            + +  GM P+ VTFS LLS+      +  GR        T G + +V+  + ++ +  +
Sbjct: 345 EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 404

Query: 512 CGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
            G +  A+++ K I  D     W ++L++
Sbjct: 405 AGLLSEAYELIKSIPFDPTASIWGSLLAS 433



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 176/367 (47%), Gaps = 1/367 (0%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           +++++   +G +   +A H  +++   + D    N LIN Y+K   +++A+++FDGML R
Sbjct: 58  EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 117

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           S ++W ++I  Y  +      L I  +M     KF+E T S +L AC +  D +  +++H
Sbjct: 118 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 177

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             ++K+  + N++VGT+L+ +Y   G  ++A  VF  +  K     + M+  Y +    E
Sbjct: 178 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 237

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  ++        E N +T ++VI  C     + EGKQ+H +  K G    + V ++ V
Sbjct: 238 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 297

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G   E+  +F  + E+NL  W  +ISG+ +     + +  F +    G+  +  
Sbjct: 298 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 357

Query: 363 CLATVIDGCSVCSNLELGLQLHGF-AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             ++++  C     +E G +        +G   +V   + +VDI  + G L  A  L+  
Sbjct: 358 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 417

Query: 422 FSCKYTA 428
                TA
Sbjct: 418 IPFDPTA 424


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 178/568 (31%), Positives = 299/568 (52%), Gaps = 19/568 (3%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGC--FREAENVFRGLAYKDVRCVNFMI---L 233
           EQ+HAF++K+   N+ FV + L+++Y          A ++F  +  + +   N +I   +
Sbjct: 30  EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89

Query: 234 EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
           E   + +  + FH  VH    ++ P+++T   VI  C     V+EGKQ+HGLA+K G   
Sbjct: 90  ENQFSHDGIVLFHELVH----EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGS 145

Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
           ++ V  ++V MY K G  + A ++FD + +++++ W +LI GY R G    A+  F E  
Sbjct: 146 DVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMP 205

Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
           +     D+     ++DG S C  +E   +L         +S      A+++ Y K GD  
Sbjct: 206 ER----DAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVS----WNAMINGYMKSGDFD 257

Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
           SA  L           +N +++G+  ++     D + +F      G  P   T   +LS 
Sbjct: 258 SALELFYQMPIWDLVTWNLMIAGY--ELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSA 315

Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +  A L +GR +H+Y  K G+  D I+G +LI MYAKCG I+ A  +F+ I  + +  W
Sbjct: 316 VSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHW 375

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
            A++    +HG+   AL LF EM + G  P+ I  +GVL AC ++GL + G   F+ +  
Sbjct: 376 TAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMN 435

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            Y + P LEH+ C+VD+L RAG L EA N I + P S + ++W +L+  S+         
Sbjct: 436 EYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGE 495

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
            A++R++++ P+  G +IL+SNMYA  GM ++ + VR  M      K+ GCS +E    L
Sbjct: 496 YAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTL 555

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK 741
           H F+     HP+++EIY+K+  + +++K
Sbjct: 556 HEFIVGDISHPQTKEIYAKMSEMKEKLK 583



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 204/428 (47%), Gaps = 20/428 (4%)

Query: 67  ISIGSGDLKLG-------QAVHAFLLKSGSQNDTFEANNLINLYA--KFNRLDVAQKLFD 117
           + +G  D ++G       + +HAF LK+   N  F ++ L+ LY+  K N L  A+ +FD
Sbjct: 12  LELGFADQRMGLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFD 71

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            +  RS I W ++IK Y+++      + +  ++   E   +  T   +++ C+ L     
Sbjct: 72  RIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQE 130

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+QIH  A+K GF ++VFV  SL++MY   G    A  VF G+  KDV   N +I  Y +
Sbjct: 131 GKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYAR 190

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            GE ++A  +F  +   D     +++T ++    +   VE  ++L          R +  
Sbjct: 191 CGEIDIALQLFEEMPERD----AFSWTVLVDGLSKCGKVESARKLFDQM----PCRNLVS 242

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NA++  Y K G  + A  +F  +   +L++W  +I+GY  +G    A+  F   L LG 
Sbjct: 243 WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS 302

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
               + L +V+   S  + L  G  +H +  K+G+  D  LGT+L+++YAK G ++SA  
Sbjct: 303 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALT 362

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           +      K    + AI+ G    I       + LF +    G++P+ + F  +L+     
Sbjct: 363 VFRAIQKKKVGHWTAIIVGL--GIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHA 420

Query: 478 ACLVRGRS 485
             +  GR 
Sbjct: 421 GLVDDGRQ 428



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 165/360 (45%), Gaps = 17/360 (4%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K     G ++ G+ +H   LK G  +D F   +L+N+Y+K   +D A+K+FDGM+ 
Sbjct: 116 PCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMID 175

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI---LEACSLLED-RIF 177
           +  + W SLI GY   G+    + IA  ++    + +  + +V+   L  C  +E  R  
Sbjct: 176 KDVVLWNSLIDGYARCGE----IDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKL 231

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
            +Q+           N+    ++I+ Y  SG F  A  +F  +   D+   N MI  Y  
Sbjct: 232 FDQMPC--------RNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYEL 283

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G+   A  +F  +L     P+  T  +V+S       + +G+ +H    K G   +  +
Sbjct: 284 NGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGIL 343

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G +++ MY K G  E A  +F AI ++ +  WTA+I G    G    A+  FLE    G+
Sbjct: 344 GTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGL 403

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAI-KHGYLSDVRLGTALVDIYAKGGDLKSAR 416
             ++     V++ C+    ++ G Q     + ++     +     LVDI  + G L+ A+
Sbjct: 404 KPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAK 463



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 33/290 (11%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           L +   + D F    L++  +K  +++ A+KLFD M  R+ ++W ++I GY+  GD++S 
Sbjct: 200 LFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSA 259

Query: 144 LGIACDM--------------YRSEEKF-----------------NEHTCSVILEACSLL 172
           L +   M              Y    +F                 +  T   +L A S L
Sbjct: 260 LELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGL 319

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
                G  IH++  K+GFE +  +GTSLI MY   GC   A  VFR +  K V     +I
Sbjct: 320 AVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAII 379

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV-KFGV 291
           +     G +  A  +F+ +  +  +PN   F  V++ C     V++G+Q   + + ++ +
Sbjct: 380 VGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKI 439

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSG 340
              +     +V +  + G  EEA+   + +    N + W +L+ G    G
Sbjct: 440 EPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 489


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 198/635 (31%), Positives = 343/635 (54%), Gaps = 5/635 (0%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA +L  G  + +   + L   YA+ +    A  LFD +      +W ++++ Y+  
Sbjct: 31  KRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQI 90

Query: 138 GDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           G     L +  +M  S     ++ T  V+++AC  L     G  IH    K G++++ FV
Sbjct: 91  GRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFV 150

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L++MY ++G    A+ VF  +  + V   N MI  Y +   +E A +V+  ++    
Sbjct: 151 QNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGV 210

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
           EP+  T  +V+  C     VE G+++H L  + G    I V NA+V MY K G  +EA  
Sbjct: 211 EPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWL 270

Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
           +   + ++++++WT LI+GY+ +G    A+         G+  +S  +A+++  C     
Sbjct: 271 LAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVY 330

Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
           L  G  LH +AI+    S+V + TAL+++YAK      +  +  G S K TA +NA+LSG
Sbjct: 331 LNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSG 390

Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
           F++     E   + LF Q  +  ++PD  TF+ LL   A  A L +  ++H Y I++G+ 
Sbjct: 391 FIQNRLARE--AIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFL 448

Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGIS--DRDIVSWNAMLSAYALHGLGKGALLLFE 554
             + V + L+ +Y+KCGS+  A QIF  IS  D+DI+ W+A+++AY  HG GK A+ LF 
Sbjct: 449 YRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFN 508

Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
           +M + G  P+ ++   VL AC ++GL   G  LFN + + + +   ++H+ CM+DLLGRA
Sbjct: 509 QMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRA 568

Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           GRL++A NLI + P + +  +W  L+    +  N +   +A++    LEP++ G+++L++
Sbjct: 569 GRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLA 628

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
            +YA  G   +A +VR  +N++ L K    S IE+
Sbjct: 629 KLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEV 663



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 228/488 (46%), Gaps = 8/488 (1%)

Query: 61  WPQLVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           +P ++K     GDL L   G  +H    K G  +DTF  N L+ +Y      + AQ +FD
Sbjct: 116 YPVVIK---ACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFD 172

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  R+ I+W ++I GY  +   E  + +   M     + +  T   +L AC LL++   
Sbjct: 173 PMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVEL 232

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G ++H    + GF  N+ V  +L+ MY   G  +EA  + +G+  KDV     +I  Y  
Sbjct: 233 GREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYIL 292

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G++  A  +   +     +PN  +  +++S C   + +  GK LH  A++  +  E+ V
Sbjct: 293 NGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIV 352

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             A++ MY K      + ++F   S++    W AL+SG++++    +AI  F + L   +
Sbjct: 353 ETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDV 412

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D +   +++   ++ ++L+  + +H + I+ G+L  + + + LVDIY+K G L  A  
Sbjct: 413 QPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQ 472

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +  S K                    +  + LF+Q   +G++P+ VTF+ +L   +  
Sbjct: 473 IFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHA 532

Query: 478 ACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNA 535
             +  G SL  + +K     + V     +I +  + G ++ A+ + + +    +   W A
Sbjct: 533 GLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGA 592

Query: 536 MLSAYALH 543
           +L A  +H
Sbjct: 593 LLGACVIH 600



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 202/419 (48%), Gaps = 14/419 (3%)

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
           E K+LH L +  G+    ++ + + T Y +   +  A  +FD +S+  L SW A++  YV
Sbjct: 29  ETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYV 88

Query: 338 RSGHGGKAINGFLEFLDLG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           + G    A+N F+E L  G    D      VI  C   S +++G+ +HG   K GY SD 
Sbjct: 89  QIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDT 148

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +   L+ +Y   G+ ++A+++ D    +    +N +++G+     +  ED + ++ +  
Sbjct: 149 FVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRN--NCAEDAVNVYGRMM 206

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
             G+EPD  T   +L        +  GR +H    + G+  +++V NAL+ MY KCG + 
Sbjct: 207 DVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMK 266

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A+ + KG+ D+D+V+W  +++ Y L+G  + AL+L   M+ EG  P+ +SI  +L AC 
Sbjct: 267 EAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACG 326

Query: 577 YSGLSEGGICLFN-EIEQIYGLRPILEHFACMVDLLGR--AGRLSEAMNLINSSPFSESP 633
                  G CL    I Q      I+E    ++++  +   G LS  +  + +S    +P
Sbjct: 327 SLVYLNHGKCLHAWAIRQKIESEVIVE--TALINMYAKCNCGNLSYKV-FMGTSKKRTAP 383

Query: 634 LLWRTLVS--VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
             W  L+S  +   +A     +     + D++P D  +F  +   YA    L +A  + 
Sbjct: 384 --WNALLSGFIQNRLAREAIELFKQMLVKDVQP-DHATFNSLLPAYAILADLQQAMNIH 439


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 211/729 (28%), Positives = 363/729 (49%), Gaps = 20/729 (2%)

Query: 31  TFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSG-- 88
           T + N  + +  L SI+  S  ++ L  +  P  +K +    D +  +A+HA  L+ G  
Sbjct: 31  TAAGNHAAALRALSSITMAS-PQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLL 89

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGML--VRSAITWTSLIKGYLDDGDYESVLGI 146
            +     AN L+  YA+  RL  A ++F  +      A+++ SLI        ++  L  
Sbjct: 90  HRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAA 149

Query: 147 ACDMYRSEEKFNEHTCSVILEACSLLEDRI----FGEQIHAFAIKSGF--ENNVFVGTSL 200
              M          T   +L A S L         G + HAFA+K+G    +  F   +L
Sbjct: 150 LRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNAL 209

Query: 201 ISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +SMY   G   +A+ +F G      DV   N M+    ++G  + A      +++    P
Sbjct: 210 LSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRP 269

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERM 317
           +  TF + +  C     ++ G+++H   +K   +   S V +A+V MY  H    +A ++
Sbjct: 270 DGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQV 329

Query: 318 FDAI--SERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVC 374
           FD +  S + L  W A+I GY ++G   +A+  F     + G     + +A+V+  C+  
Sbjct: 330 FDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARS 389

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
                   +HG+ +K G   +  +  AL+D+YA+ G    AR +           +N ++
Sbjct: 390 EAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLI 449

Query: 435 SG-FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +G  ++    D   +     Q    G+ P+ +T   LL   A  A   RG+ +H Y+++ 
Sbjct: 450 TGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRH 509

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
               DV VG+AL+ MYAKCG +  +  +F  +  R+ ++WN ++ AY +HGLG  A +LF
Sbjct: 510 ALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLF 569

Query: 554 EEMKREGFA-PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           + M   G A P++++ +  L AC +SG+ + G+ LF+ +E+ +G+ P  +  AC+VD+LG
Sbjct: 570 DRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILG 629

Query: 613 RAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           RAGRL EA  ++ S    E  +  W T++   +L  N     +A +RLL+LEP++A  ++
Sbjct: 630 RAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYV 689

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+ N+Y+  G    AA+VR+ M    ++KE GCSWIE+D  +H F+A    HP SEE+++
Sbjct: 690 LLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHA 749

Query: 732 KLDLLNDEM 740
            ++ L  EM
Sbjct: 750 HMEALWGEM 758


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 211/729 (28%), Positives = 363/729 (49%), Gaps = 20/729 (2%)

Query: 31  TFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSG-- 88
           T + N  + +  L SI+  S  ++ L  +  P  +K +    D +  +A+HA  L+ G  
Sbjct: 33  TAAGNHAAALRALSSITMAS-PQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLL 91

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGML--VRSAITWTSLIKGYLDDGDYESVLGI 146
            +     AN L+  YA+  RL  A ++F  +      A+++ SLI        ++  L  
Sbjct: 92  HRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAA 151

Query: 147 ACDMYRSEEKFNEHTCSVILEACSLLEDRI----FGEQIHAFAIKSGF--ENNVFVGTSL 200
              M          T   +L A S L         G + HAFA+K+G    +  F   +L
Sbjct: 152 LRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNAL 211

Query: 201 ISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
           +SMY   G   +A+ +F G      DV   N M+    ++G  + A      +++    P
Sbjct: 212 LSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRP 271

Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERM 317
           +  TF + +  C     ++ G+++H   +K   +   S V +A+V MY  H    +A ++
Sbjct: 272 DGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQV 331

Query: 318 FDAI--SERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDSSCLATVIDGCSVC 374
           FD +  S + L  W A+I GY ++G   +A+  F     + G     + +A+V+  C+  
Sbjct: 332 FDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARS 391

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
                   +HG+ +K G   +  +  AL+D+YA+ G    AR +           +N ++
Sbjct: 392 EAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLI 451

Query: 435 SG-FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           +G  ++    D   +     Q    G+ P+ +T   LL   A  A   RG+ +H Y+++ 
Sbjct: 452 TGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRH 511

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
               DV VG+AL+ MYAKCG +  +  +F  +  R+ ++WN ++ AY +HGLG  A +LF
Sbjct: 512 ALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLF 571

Query: 554 EEMKREGFA-PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           + M   G A P++++ +  L AC +SG+ + G+ LF+ +E+ +G+ P  +  AC+VD+LG
Sbjct: 572 DRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILG 631

Query: 613 RAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
           RAGRL EA  ++ S    E  +  W T++   +L  N     +A +RLL+LEP++A  ++
Sbjct: 632 RAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYV 691

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+ N+Y+  G    AA+VR+ M    ++KE GCSWIE+D  +H F+A    HP SEE+++
Sbjct: 692 LLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHA 751

Query: 732 KLDLLNDEM 740
            ++ L  EM
Sbjct: 752 HMEALWGEM 760


>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Glycine max]
          Length = 644

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 177/573 (30%), Positives = 297/573 (51%), Gaps = 9/573 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+Q+HA  IK GF + + +   ++ +Y       +AE +F  L+ ++V   N +I     
Sbjct: 69  GKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSVRNVVSWNILIRGIVG 128

Query: 238 AGES-------EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
            G++       +  F  F  +L     P+  TF  +  VC +   ++ G QLH  AVK G
Sbjct: 129 CGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDIDMGFQLHCFAVKLG 188

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
           +  +  VG+ +V +Y + G+ E A R+F  +  R+L+ W  +IS Y  +    +A   F 
Sbjct: 189 LDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDLVVWNVMISCYALNCLPEEAFVMFN 248

Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
                G   D    + ++  C      + G Q+HG  ++  + SDV + +AL+++YAK  
Sbjct: 249 LMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMYAKNE 308

Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
           ++  A  L D    +    +N I+ G+  +   +E  VM L  +    G  PD +T S  
Sbjct: 309 NIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNE--VMKLLREMLREGFSPDELTISST 366

Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
           +SL    + +      HA+++K+ +   + V N+LI+ Y+KCGSI  A + F+   + D+
Sbjct: 367 ISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITSACKCFRLTREPDL 426

Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
           VSW ++++AYA HGL K A  +FE+M   G  PD IS LGVL AC + GL   G+  FN 
Sbjct: 427 VSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQISFLGVLSACSHCGLVTKGLHYFNL 486

Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
           +  +Y + P   H+ C+VDLLGR G ++EA   + S P           V+   L AN  
Sbjct: 487 MTSVYKIVPDSGHYTCLVDLLGRYGLINEAFEFLRSMPMEAESNTLGAFVASCNLHANIG 546

Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
            +  A+++L  +EP+   ++ ++SN+YA      +  +VR  M +   ++  GCSWIEI 
Sbjct: 547 LAKWAAEKLFTIEPEKNVNYAVMSNIYASHRHWSDVERVRRMMGNKCDARVPGCSWIEIT 606

Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK 743
           +++H FV++ K HP++ E+++ L +L   MK K
Sbjct: 607 NQVHSFVSNDKIHPKALEMHATLKMLLWPMKEK 639



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 172/326 (52%), Gaps = 10/326 (3%)

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           N + V  +   + EGKQLH   +KFG    +S+ N I+ +Y K   +++AE++F+ +S R
Sbjct: 55  NALKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSVR 114

Query: 325 NLISWTALISGYVRSGHGG-------KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           N++SW  LI G V  G          +  + F   L   +  DS+    +   C    ++
Sbjct: 115 NVVSWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDI 174

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           ++G QLH FA+K G   D  +G+ LVD+YA+ G +++AR +      +    +N ++S +
Sbjct: 175 DMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDLVVWNVMISCY 234

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
                   E+  V+F+  R  G   D  TFS LLS+  S      G+ +H + ++  + +
Sbjct: 235 ALNCL--PEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDS 292

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           DV+V +ALI MYAK  +I  A ++F  +  R++V+WN ++  Y     G   + L  EM 
Sbjct: 293 DVLVASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNEVMKLLREML 352

Query: 558 REGFAPDDISILGVLQACIY-SGLSE 582
           REGF+PD+++I   +  C Y S ++E
Sbjct: 353 REGFSPDELTISSTISLCGYVSAITE 378



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 240/531 (45%), Gaps = 53/531 (9%)

Query: 65  VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
           +K+S     L  G+ +HA L+K G  +     N ++ +Y K    D A+KLF+ + VR+ 
Sbjct: 57  LKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSVRNV 116

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC-----SVILE------------ 167
           ++W  LI+G +  GD             +E   N+  C      ++LE            
Sbjct: 117 VSWNILIRGIVGCGD------------ANENDSNQQQCFSYFKRMLLELVVPDSTTFNGL 164

Query: 168 --ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
              C    D   G Q+H FA+K G + + FVG+ L+ +Y   G    A  VF  + ++D+
Sbjct: 165 FGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDL 224

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
              N MI  Y      E AF +F  +       +++TF+N++S+C      + GKQ+HG 
Sbjct: 225 VVWNVMISCYALNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGH 284

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
            ++     ++ V +A++ MY K+    +A R+FD +  RN+++W  +I GY     G + 
Sbjct: 285 ILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNEV 344

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +    E L  G   D   +++ I  C   S +   +Q H FA+K  +   + +  +L+  
Sbjct: 345 MKLLREMLREGFSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISA 404

Query: 406 YAKGGDLKSA----RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
           Y+K G + SA    R+  +     +T+  NA     + K A +      +F +    G+ 
Sbjct: 405 YSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHGLAKEATE------VFEKMLSCGII 458

Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY---AADVIVGNALITMYAKCGSIDGA 518
           PD ++F  L  LSA   C +  + LH +++ T       D      L+ +  + G I+ A
Sbjct: 459 PDQISF--LGVLSACSHCGLVTKGLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLINEA 516

Query: 519 FQIFKGIS-DRDIVSWNAMLSAYALH---GLGKGA---LLLFEEMKREGFA 562
           F+  + +  + +  +  A +++  LH   GL K A   L   E  K   +A
Sbjct: 517 FEFLRSMPMEAESNTLGAFVASCNLHANIGLAKWAAEKLFTIEPEKNVNYA 567


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 194/675 (28%), Positives = 333/675 (49%), Gaps = 5/675 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++   G GDL +GQ VH  ++KSG   D      L+++Y +   LD A+K+F  M 
Sbjct: 102 FPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMP 161

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           +R  ++W+S+I   +++G+    L     M       +      ++EAC  L      + 
Sbjct: 162 LRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKS 221

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
            H + +K G EN+ FV +SLI MY   G  R AE VF  + Y+       MI  YN  G 
Sbjct: 222 AHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGY 281

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGN 299
            + A  +FV +  ++ EPN  T   ++  C     + EGK +H + +K  +   +  +G 
Sbjct: 282 LKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGP 341

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            ++ +Y      +  E++   I  R +  W  LIS Y + G   + ++ F+     G   
Sbjct: 342 TLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMP 401

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           DS  LA+ +        L+LGLQ+HG  IK  ++ D  +  +L+++Y+K G +  A M+ 
Sbjct: 402 DSFSLASSLSASGNEGELQLGLQIHGHVIKRPFM-DEYVFNSLINMYSKCGYVDLAYMIF 460

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    K    +N+++SG  +         + LF    +   E   V F  ++   +    
Sbjct: 461 DQMEPKGVVTWNSMISGLSQN--GYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGF 518

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L +G+ +H   I  G    + +  AL+ MYAKCG +  A ++F  +S+R +VSW++++S+
Sbjct: 519 LEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISS 578

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y +HG     + LF +M   G  P+D++++ VL AC ++G  + G+  FN +   +G+ P
Sbjct: 579 YGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRD-FGIEP 637

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             EHF C+VDLL RAG L EA  +I   PF     +W  L++  ++      +    + L
Sbjct: 638 KREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQREL 697

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
            +++  D G + L+SN+YA  G  +E  +VR+ M    L K    S +E+  K + F A 
Sbjct: 698 WNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAG 757

Query: 720 GKDHPESEEIYSKLD 734
              +P+ +  YS  +
Sbjct: 758 DASYPQLKYTYSTFN 772



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 160/623 (25%), Positives = 295/623 (47%), Gaps = 16/623 (2%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
            S  L+    +HA ++ +   ND   +  LI  Y++   L  +  +F       +  W  
Sbjct: 10  ASTTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGV 69

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           L+K ++ +G Y+  + +   M   + + N +T   +L ACS   D   G+++H   IKSG
Sbjct: 70  LLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSG 129

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F+ +  V T+L+S+Y   G    A  VF  +  +D+   + +I    + GE       F 
Sbjct: 130 FDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFR 189

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
            ++S    P+      V+  C E LGV    K  HG  +K G+  +  V ++++ MY K 
Sbjct: 190 CMVSEGGTPDSVLVLTVVEACGE-LGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKC 248

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    AE +F+ ++ R+  +WTA+IS Y   G+  +A+  F+      +  +S  +  ++
Sbjct: 249 GSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIIL 308

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
             C+  S L  G  +H   IK+   +++  LG  L+++YA          +L     +  
Sbjct: 309 RSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGI 368

Query: 428 AEFNAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
           A +N ++S + +K +  +  D+ V   +Q   G  PD  + +  LS S ++  L  G  +
Sbjct: 369 AVWNTLISVYAQKGLLKETVDLFVRMQKQ---GFMPDSFSLASSLSASGNEGELQLGLQI 425

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H + IK  +  D  V N+LI MY+KCG +D A+ IF  +  + +V+WN+M+S  + +G  
Sbjct: 426 HGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYS 484

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             A+ LF+ M        +++ + V+QAC + G  E G  + +++    G+R  +     
Sbjct: 485 TKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITC-GVRKCIFIETA 543

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD--LEP 664
           +VD+  + G L  A  + ++     S + W +L+S   +       I    ++L+  ++P
Sbjct: 544 LVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKP 602

Query: 665 KDAGSF-ILVSNMYAG---QGML 683
            D     +L +  +AG   +GML
Sbjct: 603 NDVTVMNVLSACSHAGCVKEGML 625


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 197/684 (28%), Positives = 333/684 (48%), Gaps = 90/684 (13%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
           + +   +N  I  + +  R+  A++LF  M  RS  T+ +++ GY  +G     L +A  
Sbjct: 35  EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGR----LPLAAS 90

Query: 150 MYRSEEKFNEHTCSVILEA----CSLLEDR-IFGEQIHAFAIKSGFENNVFVGT------ 198
           ++R+  + + ++ + +L A     SL + R +F E      ++     NV + +      
Sbjct: 91  LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDE----MPVRDSVTYNVMISSHANHGL 146

Query: 199 --------------------SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
                                +++ Y  +G   EA  +F      D    N ++  Y + 
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQW 206

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISV 297
           G+   A  +F  +   D         N++   Y   G + E ++L   A     VR++  
Sbjct: 207 GKMSEARELFDRMPGRDV-----VSWNIMVSGYARRGDMVEARRLFDAAP----VRDVFT 257

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
             A+V+ Y ++GM EEA R+FDA+ ERN +SW A+++ Y++     + ++   E  ++  
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR----RMMDEAKELFNMMP 313

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
           C + +   T++ G                                   YA+ G L+ A+ 
Sbjct: 314 CRNVASWNTMLTG-----------------------------------YAQAGMLEEAKA 338

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    + A+L+ + +      E+ + LF +    G   +   F+ +LS  A  
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQ--GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
           A L  G  LH   I+ GY     VGNAL+ MY KCG+++ A   F+ + +RD+VSWN M+
Sbjct: 397 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 456

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + YA HG GK AL +F+ M+     PDDI+++GVL AC +SGL E GI  F  +   +G+
Sbjct: 457 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 516

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
               EH+ CM+DLLGRAGRL+EA +L+   PF     +W  L+  S++  N +    A++
Sbjct: 517 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 576

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
           ++ +LEP++AG ++L+SN+YA  G   +A K+R  M +  + K  G SWIE+ +K+H F 
Sbjct: 577 KIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFS 636

Query: 718 ASGKDHPESEEIYSKLDLLNDEMK 741
           A    HPE E+IY+ L+ L+  MK
Sbjct: 637 AGDCVHPEKEKIYAFLEDLDMRMK 660



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 172/369 (46%), Gaps = 15/369 (4%)

Query: 57  LFN---DWPQLVKISIGSGDLKLGQAVHAF-LLKSGSQNDTFEANNLINLYAKFNRLDVA 112
           LFN   +W  +   ++ SG ++ G+   A  L       D    N +++ YA+   +  A
Sbjct: 184 LFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA 243

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL 172
           ++LFD   VR   TWT+++ GY  +G    +L  A  ++ +  + N  + + ++ A   +
Sbjct: 244 RRLFDAAPVRDVFTWTAVVSGYAQNG----MLEEARRVFDAMPERNAVSWNAMVAA--YI 297

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
           + R+  E    F +      NV    ++++ Y  +G   EA+ VF  +  KD      M+
Sbjct: 298 QRRMMDEAKELFNMMPC--RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV 292
             Y++ G SE    +F+ +       N   F  V+S C +   +E G QLHG  ++ G  
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415

Query: 293 REISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF 352
               VGNA++ MY K G  E+A   F+ + ER+++SW  +I+GY R G G +A+  F   
Sbjct: 416 VGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMM 475

Query: 353 LDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKH--GYLSDVRLGTALVDIYAKGG 410
                  D   L  V+  CS    +E G+  + +++ H  G  +     T ++D+  + G
Sbjct: 476 RTTSTKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHHDFGVTAKPEHYTCMIDLLGRAG 534

Query: 411 DLKSARMLL 419
            L  A  L+
Sbjct: 535 RLAEAHDLM 543


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 183/577 (31%), Positives = 311/577 (53%), Gaps = 8/577 (1%)

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H   IKSGF  + F+G  LI  Y   G   EA  +F  L  + +   N MI  +   G+
Sbjct: 23  VHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGK 81

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGV-VREISVG 298
           S+ A   + ++L     P+ YTF+  IS  +  LG +  G++ HGLAV  G+ V +  V 
Sbjct: 82  SKEAVEFYGNMLMEGVLPDAYTFS-AISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVA 140

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           +A+V MY K     +A  +F  + E++++ +TALI GY + G  G+A+  F + ++ G+ 
Sbjct: 141 SALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVK 200

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            +   LA ++  C    +L  G  +HG  +K G  S V   T+L+ +Y++   ++ +  +
Sbjct: 201 PNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKV 260

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +         + + + G ++     EE  + +F +     + P+P T S +L   +S A
Sbjct: 261 FNQLDYANQVTWTSFVVGLVQN--GREEVAVSIFREMIRCSISPNPFTLSSILQACSSLA 318

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L  G  +HA ++K G   +   G ALI +Y KCG++D A  +F  +++ D+V+ N+M+ 
Sbjct: 319 MLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIY 378

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
           AYA +G G  AL LFE +K  G  P+ ++ + +L AC  +GL E G  +F  I   + + 
Sbjct: 379 AYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIE 438

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
             ++HF CM+DLLGR+ RL EA  LI     +   +LWRTL++  K+    + +     +
Sbjct: 439 LTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSK 497

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           +L+L P D G+ IL++N+YA  G  ++  ++++T+ DL+L K    SW+++D ++H F+A
Sbjct: 498 ILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMA 557

Query: 719 SGKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
               HP S EI+  L  L  ++K L    ++ F LQD
Sbjct: 558 GDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQD 594



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 247/491 (50%), Gaps = 9/491 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
            N +  L+  S  +  L   +AVH  ++KSG    +F  + LI+ Y K   L  A+KLFD
Sbjct: 1   MNFYSSLIAQSAHTKSLTTLRAVHTNVIKSGFSY-SFLGHKLIDGYIKCGSLAEARKLFD 59

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            +  R  +TW S+I  ++  G  +  +    +M       + +T S I +A S L     
Sbjct: 60  ELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRH 119

Query: 178 GEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           G++ H  A+  G E  + FV ++L+ MY      R+A  VFR +  KDV     +I+ Y 
Sbjct: 120 GQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYA 179

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREI 295
           + G    A  +F  +++   +PN+YT   ++  C  NLG +  G+ +HGL VK G+   +
Sbjct: 180 QHGLDGEALKIFEDMVNRGVKPNEYTLACILINC-GNLGDLVNGQLIHGLVVKSGLESVV 238

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
           +   +++TMY +  M E++ ++F+ +   N ++WT+ + G V++G    A++ F E +  
Sbjct: 239 ASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRC 298

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            I  +   L++++  CS  + LE+G Q+H   +K G   +   G AL+++Y K G++  A
Sbjct: 299 SISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKA 358

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           R + D  +       N+++  + +     E   + LF + +  G+ P+ VTF  +L L+ 
Sbjct: 359 RSVFDVLTELDVVAINSMIYAYAQNGFGHE--ALELFERLKNMGLVPNGVTFISIL-LAC 415

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
           + A LV        SI+  +  ++ + +   +I +  +   ++ A  + + + + D+V W
Sbjct: 416 NNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLW 475

Query: 534 NAMLSAYALHG 544
             +L++  +HG
Sbjct: 476 RTLLNSCKIHG 486


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 194/675 (28%), Positives = 333/675 (49%), Gaps = 5/675 (0%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P +++   G GDL +GQ VH  ++KSG   D      L+++Y +   LD A+K+F  M 
Sbjct: 102 FPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMP 161

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
           +R  ++W+S+I   +++G+    L     M       +      ++EAC  L      + 
Sbjct: 162 LRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKS 221

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
            H + +K G EN+ FV +SLI MY   G  R AE VF  + Y+       MI  YN  G 
Sbjct: 222 AHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGY 281

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGN 299
            + A  +FV +  ++ EPN  T   ++  C     + EGK +H + +K  +   +  +G 
Sbjct: 282 LKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGP 341

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
            ++ +Y      +  E++   I  R +  W  LIS Y + G   + ++ F+     G   
Sbjct: 342 TLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMP 401

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           DS  LA+ +        L+LGLQ+HG  IK  ++ D  +  +L+++Y+K G +  A M+ 
Sbjct: 402 DSFSLASSLSASGNEGELQLGLQIHGHVIKRPFM-DEYVFNSLINMYSKCGYVDLAYMIF 460

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
           D    K    +N+++SG  +         + LF    +   E   V F  ++   +    
Sbjct: 461 DQMEPKGVVTWNSMISGLSQN--GYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGF 518

Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
           L +G+ +H   I  G    + +  AL+ MYAKCG +  A ++F  +S+R +VSW++++S+
Sbjct: 519 LEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISS 578

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           Y +HG     + LF +M   G  P+D++++ VL AC ++G  + G+  FN +   +G+ P
Sbjct: 579 YGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRD-FGIEP 637

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
             EHF C+VDLL RAG L EA  +I   PF     +W  L++  ++      +    + L
Sbjct: 638 KREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQREL 697

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
            +++  D G + L+SN+YA  G  +E  +VR+ M    L K    S +E+  K + F A 
Sbjct: 698 WNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAG 757

Query: 720 GKDHPESEEIYSKLD 734
              +P+ +  YS  +
Sbjct: 758 DASYPQLKYTYSTFN 772



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 160/623 (25%), Positives = 295/623 (47%), Gaps = 16/623 (2%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
            S  L+    +HA ++ +   ND   +  LI  Y++   L  +  +F       +  W  
Sbjct: 10  ASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGV 69

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           L+K ++ +G Y+  + +   M   + + N +T   +L ACS   D   G+++H   IKSG
Sbjct: 70  LLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSG 129

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F+ +  V T+L+S+Y   G    A  VF  +  +D+   + +I    + GE       F 
Sbjct: 130 FDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFR 189

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
            ++S    P+      V+  C E LGV    K  HG  +K G+  +  V ++++ MY K 
Sbjct: 190 CMVSEGGTPDSVLVLTVVEACGE-LGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKC 248

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G    AE +F+ ++ R+  +WTA+IS Y   G+  +A+  F+      +  +S  +  ++
Sbjct: 249 GSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIIL 308

Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
             C+  S L  G  +H   IK+   +++  LG  L+++YA          +L     +  
Sbjct: 309 RSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGI 368

Query: 428 AEFNAILSGFMEK-IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
           A +N ++S + +K +  +  D+ V   +Q   G  PD  + +  LS S ++  L  G  +
Sbjct: 369 AVWNTLISVYAQKGLLKETVDLFVRMQKQ---GFMPDSFSLASSLSASGNEGELQLGLQI 425

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H + IK  +  D  V N+LI MY+KCG +D A+ IF  +  + +V+WN+M+S  + +G  
Sbjct: 426 HGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYS 484

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             A+ LF+ M        +++ + V+QAC + G  E G  + +++    G+R  +     
Sbjct: 485 TKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITC-GVRKCIFIETA 543

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD--LEP 664
           +VD+  + G L  A  + ++     S + W +L+S   +       I    ++L+  ++P
Sbjct: 544 LVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKP 602

Query: 665 KDAGSF-ILVSNMYAG---QGML 683
            D     +L +  +AG   +GML
Sbjct: 603 NDVTVMNVLSACSHAGCVKEGML 625


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 175/568 (30%), Positives = 293/568 (51%), Gaps = 5/568 (0%)

Query: 177 FGEQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
            G  +HA  +K+       F+   LI+MY        A  V R    ++V     +I   
Sbjct: 24  LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G    A   F  +      PND+TF               GKQ+H LAVK G + ++
Sbjct: 84  AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            VG +   MY K  + ++A ++FD I ERNL +W A IS  V  G   +AI  F+EF  +
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
               +S      ++ CS   +L LG+QLHG  ++ G+ +DV +   L+D Y K   ++S+
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
            ++      K    + ++++ +++   D++  V+ L S++ +  +E      S +LS  A
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI--VETSDFMISSVLSACA 321

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
             A L  GRS+HA+++K      + VG+AL+ MY KCG I+ + Q F  + ++++V+ N+
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDD--ISILGVLQACIYSGLSEGGICLFNEIEQ 593
           ++  YA  G    AL LFEEM   G  P    ++ + +L AC  +G  E G+ +F+ +  
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
            YG+ P  EH++C+VD+LGRAG +  A   I   P   +  +W  L +  ++    +  +
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501

Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
           LA++ L  L+PKD+G+ +L+SN +A  G   EA  VR  +  + + K AG SWI + +++
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561

Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMK 741
           H F A  + H  ++EI + L  L +EM+
Sbjct: 562 HAFQAKDRSHILNKEIQTTLAKLRNEME 589



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 240/499 (48%), Gaps = 9/499 (1%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           L+K +I +  ++LG+ VHA ++K+  S    F AN LIN+Y+K +  + A+ +      R
Sbjct: 12  LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           + ++WTSLI G   +G + + L    +M R     N+ T     +A + L   + G+QIH
Sbjct: 72  NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           A A+K G   +VFVG S   MY  +    +A  +F  +  +++   N  I      G   
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A   F+     D  PN  TF   ++ C + L +  G QLHGL ++ G   ++SV N ++
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
             YGK      +E +F  +  +N +SW +L++ YV++    KA   +L      +     
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            +++V+  C+  + LELG  +H  A+K      + +G+ALVD+Y K G ++ +    D  
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP--VTFSRLLSLSASQACL 480
             K     N+++ G+  +   D    + LF +    G  P P  +TF  LLS  +    +
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDM--ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429

Query: 481 VRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAML 537
             G  +   S+++ Y  +    +   ++ M  + G ++ A++  K +  +  +S W A+ 
Sbjct: 430 ENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488

Query: 538 SAYALHGLGKGALLLFEEM 556
           +A  +HG  +  LL  E +
Sbjct: 489 NACRMHGKPQLGLLAAENL 507


>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
 gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
          Length = 730

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 197/675 (29%), Positives = 341/675 (50%), Gaps = 35/675 (5%)

Query: 31  TFSPNPKSQV-AYLCSISSVS----CSERTLLFN----DWPQLVKISI-----GSGDLKL 76
            F   PK  V ++ C I++      C E   LF     +  ++V +S      G+ DL L
Sbjct: 59  VFDQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMDVEPNEMVIVSTLAACSGAKDLAL 118

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G A+HA +L    +   F    L+N+YAK   ++ A+ +FD M  +  ++WT++I  +  
Sbjct: 119 GMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFAQ 178

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
            GD    L     M ++  + N  T    + ACS  E    G +IHA  I  G   ++ +
Sbjct: 179 MGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITI 238

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +L+SMY       EA +VF+ +  ++    N MI  +  + +S  A  +F  +     
Sbjct: 239 QNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMNLEGI 298

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR---EISVGNAIVTMYGKHGMSEE 313
           +P+D +F  V+S C     +   K++H   ++   V    ++SV N++VT Y K G  E 
Sbjct: 299 KPDDVSFLGVLSACSSTGCLRSCKRIHS-QLELAAVHSPPDLSVENSLVTAYAKCGDLEA 357

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           AER+F  I  +N++SWTA+++ Y   G+G KA+  + + +   I  DS  L  VI   S+
Sbjct: 358 AERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSL 417

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             ++ L  +LH       ++  +++  AL+++YA+ G L+ AR + DG   K    +NA+
Sbjct: 418 VGDVGLARKLHARVASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNAM 477

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLA---GME------PDPVTFSRLLSLSASQACLVRGR 484
           +  +++   D+E   + LFS+ +      ME      PD +    LL   A    L  GR
Sbjct: 478 MGSYVQHGYDEE--AIALFSEMKTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEGR 535

Query: 485 SLHAY------SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            +HA        I  G   +V +GNAL++MYA+CGS+  A   F  +  RD V+W+++++
Sbjct: 536 CIHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAAFHHMRARDTVTWSSLVA 595

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            YA HG  + A+LL+ +M  EG  PD ++ + +L +C ++GL       F  + + + L 
Sbjct: 596 GYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARHFFVSMVEDHCLA 655

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
              +H+ CMVD+LGRAG +  A +++ + PF    + W TL+   K+  +++   +A++ 
Sbjct: 656 AWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVHGDAQRGAVAARN 715

Query: 659 LLDLEPKDAGSFILV 673
            + + P  AGS +L+
Sbjct: 716 AVGISPGFAGSTVLL 730



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 170/644 (26%), Positives = 301/644 (46%), Gaps = 41/644 (6%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNL-INLYAK---FNRLDVAQKLFDGMLVRSAIT 126
           S  L  G+ VH  +L +G    +    NL I +Y K    + L  A+ +FD M  +  ++
Sbjct: 11  SRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQMPKKDVVS 70

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W+ +I  Y   G     + +     R + + NE      L ACS  +D   G  IHA  +
Sbjct: 71  WSCIIAAYGQAGHCREAINL---FQRMDVEPNEMVIVSTLAACSGAKDLALGMAIHARIL 127

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
                 +VFVGT+L++MY   G   +A  VF  + +KDV     MI  + + G+   A  
Sbjct: 128 SPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFAQMGDCRQALE 187

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
               ++ +  +PN  TF   I+ C     ++ G+++H   +  G+  +I++ NA+V+MY 
Sbjct: 188 TLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYA 247

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLA 365
           K   +EEA  +F  + +RN +SW ++I+ +  S     A+ G    ++L GI  D     
Sbjct: 248 KGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAM-GLFHGMNLEGIKPDDVSFL 306

Query: 366 TVIDGCSVCSNLELGLQLHG---FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
            V+  CS    L    ++H     A  H    D+ +  +LV  YAK GDL++A  +    
Sbjct: 307 GVLSACSSTGCLRSCKRIHSQLELAAVHSP-PDLSVENSLVTAYAKCGDLEAAERIFQRI 365

Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
             K    + A+L+ +      +    + L+ +     ++PD V    ++   +    +  
Sbjct: 366 PGKNVVSWTAMLTAY--TFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGL 423

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
            R LHA    + +   + + NALI MYA+CGS++ A ++F GI  +++VSWNAM+ +Y  
Sbjct: 424 ARKLHARVASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNAMMGSYVQ 483

Query: 543 HGLGKGALLLFEEMK-------REGFAPDDISILGVLQACIYSGLSE--GGICLFNEI-- 591
           HG  + A+ LF EMK         G       I+ V+  C ++GL +   G C+  E+  
Sbjct: 484 HGYDEEAIALFSEMKTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEGRCIHAELCA 543

Query: 592 ---EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF----SESPLLWRTLVSVSK 644
              E + G    +     +V +  R G + +A     S+ F    +   + W +LV+   
Sbjct: 544 VNPEILAGSTTNVTLGNALVSMYARCGSMGDA-----SAAFHHMRARDTVTWSSLVAGYA 598

Query: 645 LMANSKFSILASK--RLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
              +++++IL  +   L  ++P D+ +++ + N  +  G+L +A
Sbjct: 599 HHGHAEYAILLYRDMHLEGVQP-DSVTYVSILNSCSHAGLLAQA 641


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 162/520 (31%), Positives = 290/520 (55%), Gaps = 15/520 (2%)

Query: 247 VFVHLLSSDFEPNDYT----------FTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           VF      +  P  Y+          F  ++ +C  N  V E K  HG  ++  +  +++
Sbjct: 40  VFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVT 99

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           + N ++  Y K G  E A ++FD + ER+L+SW  +I  Y R+    +A++ F E  + G
Sbjct: 100 LSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEG 159

Query: 357 ICCDSSCLATVIDGCSV-CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
                  +++V+  C   C  LE   +LH  ++K     ++ +GTAL+D+YAK G +  A
Sbjct: 160 FKFSEFTISSVLSACGANCDALECK-KLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDA 218

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
             + +    K +  ++++++G+++  + + E+ ++L+ + +   +E +  T S ++   +
Sbjct: 219 VQVFESMQDKSSVTWSSMVAGYVQ--SKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 276

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           + A L+ G+ +HA   K+G+ ++V V ++ + MYAKCGS+  ++ IF  + +++I  WN 
Sbjct: 277 NLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNT 336

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ++S +A H   K  ++LFE+M+++G  P++++   +L  C ++GL E G   F  +   Y
Sbjct: 337 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 396

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           GL P + H++CMVD+LGRAG LSEA  LI S PF  +  +W +L++  ++  N + + +A
Sbjct: 397 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVA 456

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           +K+L +LEP++AG+ +L+SN+YA     +E AK R  + D  + K  G SWI+I  K+H 
Sbjct: 457 AKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHI 516

Query: 716 FVASGKDHPESEEIYSKLDLLNDEM-KLKVKDSSAFELQD 754
           F      HP   EI + LD L  E+ K   K S   EL D
Sbjct: 517 FRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHD 556



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 179/371 (48%), Gaps = 1/371 (0%)

Query: 59  NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
           +D+ +++++   +G +   +A H   ++   Q D   +N LIN Y+K   +++A+++FDG
Sbjct: 64  SDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDG 123

Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
           ML RS ++W ++I  Y  +      L I  +M     KF+E T S +L AC    D +  
Sbjct: 124 MLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALEC 183

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +++H  ++K+  + N++VGT+L+ +Y   G   +A  VF  +  K     + M+  Y ++
Sbjct: 184 KKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQS 243

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              E A  ++        E N +T ++VI  C     + EGKQ+H +  K G    + V 
Sbjct: 244 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVA 303

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           ++ V MY K G   E+  +F  + E+N+  W  +ISG+ +     + +  F +    G+ 
Sbjct: 304 SSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMH 363

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGF-AIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
            +    ++++  C     +E G +        +G   +V   + +VDI  + G L  A  
Sbjct: 364 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 423

Query: 418 LLDGFSCKYTA 428
           L+     + TA
Sbjct: 424 LIKSIPFEPTA 434


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 152/452 (33%), Positives = 265/452 (58%), Gaps = 2/452 (0%)

Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
           +R I   N ++  + +HG  + A ++FD + ERN+ +W A++SG ++       +  F E
Sbjct: 20  MRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFRE 79

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
             +LG   D   L +V+ GC+       G Q+H + +K+GY  ++ +G++L  +Y K G 
Sbjct: 80  MHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGS 139

Query: 412 LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
           L     ++     +    +N +++G  +      E V+ L++  +++G+ PD +T   ++
Sbjct: 140 LGEGEKVIKAMRIRNVVAWNTLIAGNAQN--GHFEGVLDLYNMMKMSGLRPDKITLVSVI 197

Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
           S SA  A L +G+ +HA +IK G  + V V ++LI+MY+KCG ++ + +        D V
Sbjct: 198 SSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSV 257

Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
            W++M++AY  HG G+ A+ LFE+M++EG   +D++ L +L AC ++GL E G+  F  +
Sbjct: 258 LWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLM 317

Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
            + YGL+P LEH+ C+VDLLGR+G L EA  +I S P     ++W+TL+S  ++  N+  
Sbjct: 318 VEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADM 377

Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
           +   ++ +L L P+D+ +++L+SN++A      + +KVRTTM D  + KE G SW+E+ +
Sbjct: 378 ATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKN 437

Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMKLK 743
           ++  F    K HP SEEI   L  L +EMKL+
Sbjct: 438 RVFQFSMGDKSHPMSEEIDLYLKELMEEMKLR 469



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 159/324 (49%), Gaps = 1/324 (0%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N LIN + +   LD A K+FD ML R+  TW +++ G +     E+ L +  +M+     
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            +E T   +L  C+ L     G+Q+HA+ +K G+E N+ VG+SL  MY  SG   E E V
Sbjct: 87  PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
            + +  ++V   N +I    + G  E    ++  +  S   P+  T  +VIS   E   +
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
            +G+Q+H  A+K G    ++V +++++MY K G  E++ +        + + W+++I+ Y
Sbjct: 207 FQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAY 266

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI-KHGYLSD 395
              G G +A++ F +    G+  +     +++  CS     E G+      + K+G    
Sbjct: 267 GFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPR 326

Query: 396 VRLGTALVDIYAKGGDLKSARMLL 419
           +   T +VD+  + G L  A  ++
Sbjct: 327 LEHYTCVVDLLGRSGCLDEAEAMI 350



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 2/261 (0%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G+ VHA++LK G + +    ++L ++Y K   L   +K+   M +R+ + W +LI G   
Sbjct: 108 GKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQ 167

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +G +E VL +   M  S  + ++ T   ++ + + L     G+QIHA AIK+G  + V V
Sbjct: 168 NGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAV 227

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
            +SLISMY   GC  ++        + D    + MI  Y   G  E A H+F  +     
Sbjct: 228 LSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGL 287

Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAV-KFGVVREISVGNAIVTMYGKHGMSEEAE 315
             ND TF +++  C  N   E+G     L V K+G+   +     +V + G+ G  +EAE
Sbjct: 288 GGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAE 347

Query: 316 RMFDAIS-ERNLISWTALISG 335
            M  ++  E +++ W  L+S 
Sbjct: 348 AMIRSMPLEADVVIWKTLLSA 368



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 177/387 (45%), Gaps = 30/387 (7%)

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI-----LEYNKAGESEMAFHV 247
           N+     LI+ +   G    A  VF  +  ++V   N M+      E+N+ G       +
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENG-----LFL 76

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +    F P+++T  +V+  C        GKQ+H   +K+G    + VG+++  MY K
Sbjct: 77  FREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMK 136

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL----GICCDSSC 363
            G   E E++  A+  RN+++W  LI+G  ++GH      G L+  ++    G+  D   
Sbjct: 137 SGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGH----FEGVLDLYNMMKMSGLRPDKIT 192

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK-SARMLLDGF 422
           L +VI   +  + L  G Q+H  AIK G  S V + ++L+ +Y+K G L+ S + LLD  
Sbjct: 193 LVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLD-- 250

Query: 423 SCKY--TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            C++  +  ++++++ +        E+ + LF Q    G+  + VTF  LL   +     
Sbjct: 251 -CEHPDSVLWSSMIAAY--GFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLK 307

Query: 481 VRGRSLHAYSI-KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
            +G       + K G    +     ++ +  + G +D A  + + +  + D+V W  +LS
Sbjct: 308 EKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLS 367

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDD 565
           A  +H     A    EE+ R    P D
Sbjct: 368 ACRIHRNADMATRTAEEILR--LNPQD 392



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 33/165 (20%)

Query: 508 MYAKCGSI-------------------------------DGAFQIFKGISDRDIVSWNAM 536
           MY K G I                               D A ++F  + +R++ +WNAM
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +S        +  L LF EM   GF PD+ ++  VL+ C     S  G  +   + + YG
Sbjct: 61  VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLK-YG 119

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
               L   + +  +  ++G L E   +I +     + + W TL++
Sbjct: 120 YEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRI-RNVVAWNTLIA 163


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 167/516 (32%), Positives = 283/516 (54%), Gaps = 5/516 (0%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N M+  Y  AG S  A  +++++       N++T+  V+ VC   LG   G+ +HG  V+
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G   ++ V  A+V MY K G   +A  +FD +  R+++ WTA+I+ Y ++    KA+  
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F +  + G   D     +V        +  + + +HG+A+ +G++ DV +G ++V +YAK
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAK 280

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G+++ AR++ D    +    +N++LSG+ +       D + LF+Q + +  +P+PVT  
Sbjct: 281 CGNVERARLVFDRMEERNGISWNSMLSGYTQN--GRPTDALSLFNQMQASECDPNPVTAL 338

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG--IS 526
            ++S  +       GR LH + I +    D  + NA++ MY KCG +D A ++F    + 
Sbjct: 339 IMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELG 398

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           +RD+ SWN ++S Y +HG GK AL LF  M+ EG  P+DI+   +L AC ++GL + G  
Sbjct: 399 ERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRK 458

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
            F ++ ++  +RP ++H+ACMVD+LGRAG L+EA  LI   P   S  +W  L+   ++ 
Sbjct: 459 CFADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIH 517

Query: 647 ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
            N++   +A+  L  LEP+  G ++L+SN+YA      E   VR  M    L K A  S 
Sbjct: 518 GNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSV 577

Query: 707 IEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKL 742
           IE  +++H F  + +  P   E+Y K++ L  EMK+
Sbjct: 578 IEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKM 613



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 221/460 (48%), Gaps = 19/460 (4%)

Query: 99  LINLYAKFNRLDVAQKLFDGML--------VRSAITWTSLIKGYLDDGDYESVLGIACDM 150
           LI LY+K   L  A+ LFD             ++    ++++ Y + G     + +   M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
            R     N  T   +L+ C+     +FGE +H   +++GF +++FV  +L+ MY   G  
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
            +A  VF  +  +DV C   MI  Y +A     A  +F  +    F  ++ T  +V S  
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
            +         +HG AV  G + ++SVGN+IV MY K G  E A  +FD + ERN ISW 
Sbjct: 244 GQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWN 303

Query: 331 ALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI--DGCSVCSNLELGLQLHGFAI 388
           +++SGY ++G    A++ F +       CD + +  +I    CS   +  LG +LH F I
Sbjct: 304 SMLSGYTQNGRPTDALSLFNQM--QASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 361

Query: 389 KHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG--FSCKYTAEFNAILSGFMEKIADDEE 446
                 D  L  A++D+Y K GDL +A  + +      +  + +N ++SG+   +    +
Sbjct: 362 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGY--GVHGHGK 419

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
           + + LFS+ ++ G+EP+ +TF+ +LS  +    +  GR   A   K     ++     ++
Sbjct: 420 EALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMV 479

Query: 507 TMYAKCGSIDGAFQIFKGISDR--DIVSWNAMLSAYALHG 544
            M  + G ++ AF++ K I  R  D V W A+L A  +HG
Sbjct: 480 DMLGRAGFLNEAFRLIKKIPSRPSDEV-WGALLLACRIHG 518



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 174/374 (46%), Gaps = 8/374 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++K+         G+ VH  ++++G  +D F    L+++YAK   +  A ++FD ML
Sbjct: 135 YPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRML 194

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACSLLEDRIFG 178
           +R  + WT++I  Y         L +   M   EE F  +E T   +  A   L D    
Sbjct: 195 IRDVVCWTAMITLYEQAERPLKALMLFRKM--QEEGFLGDEITAISVASAVGQLGDGRMA 252

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
             +H +A+ +GF  +V VG S++ MY   G    A  VF  +  ++    N M+  Y + 
Sbjct: 253 ISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQN 312

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISV 297
           G    A  +F  + +S+ +PN  T   ++S C   LG +  G++LH   +   +  + ++
Sbjct: 313 GRPTDALSLFNQMQASECDPNPVTALIMVSAC-SYLGSKHLGRKLHNFVISSKMDIDTTL 371

Query: 298 GNAIVTMYGKHGMSEEAERMFD--AISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            NAI+ MY K G  + A  MF+   + ER++ SW  LISGY   GHG +A+  F      
Sbjct: 372 RNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVE 431

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  +     +++  CS    ++ G +      K     +++    +VD+  + G L  A
Sbjct: 432 GVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEA 491

Query: 416 RMLLDGFSCKYTAE 429
             L+     + + E
Sbjct: 492 FRLIKKIPSRPSDE 505


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 180/666 (27%), Positives = 327/666 (49%), Gaps = 63/666 (9%)

Query: 150 MYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
           M R+  + +  T   +L+AC  L     G   H     +GFE+NVF+  +L++MY   G 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 210 FREAENVFRGLAYK---DVRCVNFMILEYNKAGESEMAFHVF------VHLLSSDFEPND 260
             EA  +F  +  +   DV   N ++  + K+  +  A  +F      VH   ++   + 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
            +  N++  C     V + K++HG A++ G   ++ VGNA++  Y K G+ E A ++F+ 
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 321 ISERNLISWTALISGYVRSGH-----------------------------------GGKA 345
           +  ++++SW A+++GY +SG+                                     +A
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLS----------D 395
           +N F + +  G   +   + +V+  C+       G+++H +++K+  L+          D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSC--KYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           + +  AL+D+Y+K    K+AR + D      +    +  ++ G  +    D  D + LF 
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQY--GDSNDALKLFV 358

Query: 454 Q--QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY--AADVIVGNALITMY 509
           +      G+ P+  T S +L   A  A +  G+ +HAY ++     ++   V N LI MY
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 418

Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
           +KCG +D A  +F  +S +  +SW +M++ Y +HG G  AL +F++M++ GF PDDI+ L
Sbjct: 419 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 478

Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
            VL AC + G+ + G+  F+ +   YGL P  EH+A  +DLL R GRL +A   +   P 
Sbjct: 479 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPM 538

Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKV 689
             + ++W  L+S  ++ +N + +  A  +L+++  ++ GS+ L+SN+YA  G   + A++
Sbjct: 539 EPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARI 598

Query: 690 RTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK-LKVKDSS 748
           R  M    + K  GCSW++       F    + HP S +IY+ L+ L D +K +     +
Sbjct: 599 RHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPET 658

Query: 749 AFELQD 754
            F L D
Sbjct: 659 NFALHD 664



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 254/566 (44%), Gaps = 73/566 (12%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P ++K        + G A H  +  +G +++ F  N L+ +Y++   L+ A  +FD +  
Sbjct: 14  PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 73

Query: 122 R---SAITWTSLIKGYLDDGDYESVLGIACDM--YRSEEKFNEHTCSV----ILEACSLL 172
           R     I+W S++  ++   +  + L +   M     E+  NE +  +    IL AC  L
Sbjct: 74  RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 133

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
           +     +++H  AI++G   +VFVG +LI  Y   G    A  VF  + +KDV   N M+
Sbjct: 134 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 193

Query: 233 LEYNKAGESEMAF-----------------------------------HVFVHLLSSDFE 257
             Y+++G  + AF                                   +VF  ++ S   
Sbjct: 194 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 253

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVK---------FGVVRE-ISVGNAIVTMYGK 307
           PN  T  +V+S C       +G ++H  ++K         FG   E + V NA++ MY K
Sbjct: 254 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 313

Query: 308 HGMSEEAERMFDAI--SERNLISWTALISGYVRSGHGGKAINGFLEFLD--LGICCDSSC 363
               + A  +FD I   ERN+++WT +I G+ + G    A+  F+E +    G+  ++  
Sbjct: 314 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 373

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYL--SDVRLGTALVDIYAKGGDLKSARMLLDG 421
           ++ ++  C+  + + +G Q+H + ++H     S   +   L+++Y+K GD+ +AR + D 
Sbjct: 374 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 433

Query: 422 FSCKYTAEFNAILSGF-MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
            S K    + ++++G+ M     +  D+   F + R AG  PD +TF  L+ L A   C 
Sbjct: 434 MSQKSAISWTSMMTGYGMHGRGSEALDI---FDKMRKAGFVPDDITF--LVVLYACSHCG 488

Query: 481 VRGRSLHAY---SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAM 536
           +  + L  +   S   G           I + A+ G +D A++  K +  +   V W A+
Sbjct: 489 MVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVAL 548

Query: 537 LSAYALHG---LGKGALLLFEEMKRE 559
           LSA  +H    L + AL    EM  E
Sbjct: 549 LSACRVHSNVELAEHALNKLVEMNAE 574



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 190/427 (44%), Gaps = 63/427 (14%)

Query: 52  SERTLLFNDWP--------QLVKISIGSGDLKL---GQAVHAFLLKSGSQNDTFEANNLI 100
           S+ TL+ ++ P         +V I    G LK     + VH   +++G+  D F  N LI
Sbjct: 103 SKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALI 162

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE------ 154
           + YAK   ++ A K+F+ M  +  ++W +++ GY   G++++   +  +M +        
Sbjct: 163 DAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMV 222

Query: 155 ------EKFNEHTCS-----------------------VILEACSLLEDRIFGEQIHAFA 185
                   +++  CS                        +L AC+ L     G +IHA++
Sbjct: 223 TWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYS 282

Query: 186 IKS----------GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF--MIL 233
           +K+          G + ++ V  +LI MY     F+ A ++F  +  ++   V +  MI 
Sbjct: 283 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 342

Query: 234 EYNKAGESEMAFHVFVHLLSSDF--EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
            + + G+S  A  +FV ++S  +   PN YT + ++  C     +  GKQ+H   ++   
Sbjct: 343 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQ 402

Query: 292 VREIS--VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
               +  V N ++ MY K G  + A  +FD++S+++ ISWT++++GY   G G +A++ F
Sbjct: 403 YDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 462

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAK 408
            +    G   D      V+  CS C  ++ GL      +  +G           +D+ A+
Sbjct: 463 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLAR 522

Query: 409 GGDLKSA 415
            G L  A
Sbjct: 523 FGRLDKA 529


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 162/468 (34%), Positives = 273/468 (58%), Gaps = 5/468 (1%)

Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
           + EGK +H L +      ++ + N ++ +Y K G    A ++FD +S R++++WTALI+G
Sbjct: 31  LNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITG 90

Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL--GLQLHGFAIKHGYL 393
           Y +      A+    E L +G+  +   LA+++   S   + ++  G QLHG  +++GY 
Sbjct: 91  YSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYD 150

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
           S+V +  A++D+YA+   L+ A+++ D    K    +NA+++G+  K   D+     LFS
Sbjct: 151 SNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDK--AFCLFS 208

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
                 ++P   T+S +L   AS   L +G+ +HA  IK G      VGN L+ MYAK G
Sbjct: 209 NMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSG 268

Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
           SI+ A ++F  ++ RD+VSWN+ML+ Y+ HGLGK AL  FEEM R   AP+DI+ L VL 
Sbjct: 269 SIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLT 328

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC ++GL + G   F+ +++ Y + P + H+  MVDLLGRAG L  A+  I+  P   + 
Sbjct: 329 ACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTA 387

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
            +W  L+   ++  N +    A++ + +L+    G+ +L+ N+YA  G  ++AAKVR  M
Sbjct: 388 AVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMM 447

Query: 694 NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            +  + KE  CSW+E+++++H FVA    HP+  EI++  + ++D++K
Sbjct: 448 KESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIK 495



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 191/375 (50%), Gaps = 2/375 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+K       L  G+ +HA LL S  ++D    N L+NLYAK   L  A+KLFD M  R 
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL--EDRIFGEQI 181
            +TWT+LI GY      +  L +  +M R   K N+ T + +L+A S +   D + G Q+
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           H   ++ G+++NV+V  +++ MY       EA+ +F  +  K+    N +I  Y + G+ 
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
           + AF +F ++L  + +P  +T+++V+  C     +E+GK +H L +K+G      VGN +
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           + MY K G  E+A+++FD +++R+++SW ++++GY + G G  A+  F E L   I  + 
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPND 320

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
                V+  CS    L+ G        K+     +     +VD+  + G L  A   +  
Sbjct: 321 ITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISE 380

Query: 422 FSCKYTAEFNAILSG 436
              K TA     L G
Sbjct: 381 MPIKPTAAVWGALLG 395



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 188/391 (48%), Gaps = 17/391 (4%)

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
           C  +L+ C+ L     G+ IHA  + S F +++ +  +L+++Y   G    A  +F  ++
Sbjct: 18  CHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMS 77

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC--YENLGVEEG 279
            +DV     +I  Y++    + A  +   +L    +PN +T  +++       +  V +G
Sbjct: 78  SRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           +QLHGL +++G    + V  AI+ MY +    EEA+ +FD +  +N +SW ALI+GY R 
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G G KA   F   L   +       ++V+  C+   +LE G  +H   IK G      +G
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME----KIADDEEDVMVLFSQQ 455
             L+D+YAK G ++ A+ + D  + +    +N++L+G+ +    K+A      +  F + 
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVA------LQRFEEM 311

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCG 513
               + P+ +TF  +L+  +    L  GR  H + +   Y  +  + +   ++ +  + G
Sbjct: 312 LRTRIAPNDITFLCVLTACSHAGLLDEGR--HYFDMMKKYNVEPQISHYVTMVDLLGRAG 369

Query: 514 SIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
            +D A Q    +  +   + W A+L A  +H
Sbjct: 370 HLDRAIQFISEMPIKPTAAVWGALLGACRMH 400


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 192/643 (29%), Positives = 326/643 (50%), Gaps = 60/643 (9%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N+LI  Y++  +++ A+ +FD M  ++ I+W S++ GY  +              R +E 
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNK-------------RPQEA 148

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            N      + +  S                    E N      L+S Y ++G   EA  V
Sbjct: 149 QN------MFDKMS--------------------ERNTISWNGLVSGYINNGMINEAREV 182

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  +  ++V     M+  Y K G    A  +F  +     E N  ++T ++    +   +
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRI 238

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
           +E  +L  +  +  VV   +    ++  Y + G   EA  +FD +  RN++SWT +I+GY
Sbjct: 239 DEACRLFDMMPEKDVVTRTN----MIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGY 294

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL-HGFAIKHGYLSD 395
           V++    + ++   +  ++    +      ++ G + C  L+   +L +   IK      
Sbjct: 295 VQN----QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK-----S 345

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           V    A++  + + G++  AR + D    K    ++A++  +  K    E D + LF   
Sbjct: 346 VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGL--ELDALELFRMM 403

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           +  G+ P+  +   +LS+ A  A L  GR +HA  +++ +  DV V + L++MY KCG++
Sbjct: 404 QREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNL 463

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             A Q+F   + +D+V WN++++ YA HGLG  AL +F +M   G  PDD++ +GVL AC
Sbjct: 464 AKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSAC 523

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            Y+G  + G+ +FN +E  Y +   +EH+ACMVDLLGRAG+L+EAM+LI   P     ++
Sbjct: 524 SYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAII 583

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W  L+   +       + +A+K+LL LEPK+AG FIL+SN+YA QG  D+ A++R  M D
Sbjct: 584 WGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRD 643

Query: 696 LRLSKEAGCSWIEIDSKLHHFV-ASGKDHPESEEIYSKLDLLN 737
            R+SK  GCSWI ++ K+H F       HPE  EI   L+ L+
Sbjct: 644 RRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLS 686



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 226/459 (49%), Gaps = 24/459 (5%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
           S+ +T   N L++ Y     ++ A+++FD M  R+ ++WT++++GY+ +G    ++  A 
Sbjct: 156 SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEG----MISEAE 211

Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG 208
            ++    + N  + +V+L    LL++    E    F +    E +V   T++I  Y   G
Sbjct: 212 TLFWQMPEKNVVSWTVMLGG--LLQEGRIDEACRLFDMMP--EKDVVTRTNMIGGYCQVG 267

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
              EA  +F  +  ++V     MI  Y +  + ++A  +F  +     E N+ ++T ++ 
Sbjct: 268 RLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLK 323

Query: 269 VCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
             Y N G ++E  +L         ++ +   NA++  +G++G   +A ++FD + E++  
Sbjct: 324 -GYTNCGRLDEASELFNAM----PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEG 378

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           +W+A+I  Y R G    A+  F      GI  +   L +V+  C+  +NL+ G ++H   
Sbjct: 379 TWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQL 438

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           ++  +  DV + + L+ +Y K G+L  A+ + D F+ K    +N+I++G+ +     E  
Sbjct: 439 VRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVE-- 496

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--AL 505
            + +F     +G+ PD VTF  +LS  +    + +G  +   S++T Y  +  + +   +
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN-SMETKYQVEQKIEHYACM 555

Query: 506 ITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           + +  + G ++ A  + + +  + D + W A+L A   H
Sbjct: 556 VDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 161/368 (43%), Gaps = 43/368 (11%)

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFT-NVISVCYENLGVEEGKQLHGLAVKFGVVR 293
           +++ G S  +  +F  L+ + F  +++  + N +   Y  LG     Q+    V F  +R
Sbjct: 71  FSQPGYSMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLG-----QIEKARVVFDEMR 125

Query: 294 EISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
           + ++   N+IV  Y ++   +EA+ MFD +SERN ISW  L+SGY+ +G   +A   F  
Sbjct: 126 DKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDR 185

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLH-----------GFAIKHGYL------- 393
             +  +   ++ +   +    +     L  Q+            G  ++ G +       
Sbjct: 186 MPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLF 245

Query: 394 -----SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
                 DV   T ++  Y + G L  ARML D    +    +  +++G+   + + + D+
Sbjct: 246 DMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGY---VQNQQVDI 302

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG-NALIT 507
                 ++L  + P+    S    L     C   GR   A  +        +V  NA+I 
Sbjct: 303 -----ARKLFEVMPEKNEVSWTAMLKGYTNC---GRLDEASELFNAMPIKSVVACNAMIL 354

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
            + + G +  A Q+F  + ++D  +W+AM+  Y   GL   AL LF  M+REG  P+  S
Sbjct: 355 CFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPS 414

Query: 568 ILGVLQAC 575
           ++ VL  C
Sbjct: 415 LISVLSVC 422



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 3/121 (2%)

Query: 53  ERTLLFNDWPQLVKI---SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL 109
           +R  +  ++P L+ +     G  +L  G+ +HA L++S    D + A+ L+++Y K   L
Sbjct: 404 QREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNL 463

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
             A+++FD   V+  + W S+I GY   G     L +  DM+ S    ++ T   +L AC
Sbjct: 464 AKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSAC 523

Query: 170 S 170
           S
Sbjct: 524 S 524



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 20/200 (10%)

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           +I  N+LIT Y++ G I+ A  +F  + D++I+SWN++++ Y  +   + A  +F++M  
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP--ILEHFACMVDLLGRAGR 616
                + IS  G++   I +G       + NE  +++   P   +  +  MV    + G 
Sbjct: 158 R----NTISWNGLVSGYINNG-------MINEAREVFDRMPERNVVSWTAMVRGYVKEGM 206

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           +SEA  L    P  ++ + W   V +  L+   +  I  + RL D+ P+     +  +NM
Sbjct: 207 ISEAETLFWQMP-EKNVVSW--TVMLGGLLQEGR--IDEACRLFDMMPEK--DVVTRTNM 259

Query: 677 YAGQGMLDEAAKVRTTMNDL 696
             G   +    + R   +++
Sbjct: 260 IGGYCQVGRLVEARMLFDEM 279


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 180/563 (31%), Positives = 289/563 (51%), Gaps = 3/563 (0%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q++   I SG     F+    I+   H G    A   FR ++  D+   N +I  Y + 
Sbjct: 19  DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 78

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              +    +++ +  S   PN +TF  V+  C        GKQ+HG   K+G    + V 
Sbjct: 79  NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 138

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N++V+MY K G    A  +FD + +R ++SWT++ISGYV++G   +A+N F E     + 
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 198

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D   L +V+   +   +L  G  +HG   K G   +  +  +L  +YAK G ++ AR  
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 258

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +         +NA++SG+        E+ + LF +     +  D +T    +  SA   
Sbjct: 259 FNRMEKPNLILWNAMISGYANN--GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 316

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L   R L  Y  K+ Y  D  V   LI MYAKCGSI  A  +F  ++D+D+V W+ M+ 
Sbjct: 317 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 376

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            Y LHG G+ A+ L+ EMK+ G  P+D + +G+L AC  SGL + G  LF+ +   +G+ 
Sbjct: 377 GYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIE 435

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P  +H++C+VDLLGRAG L++A + I S P      +W  L+S  K+    +   +A+++
Sbjct: 436 PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQ 495

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L  L+P + G ++ +SN+YA   +    A VR  M    L+K+ G S IEI+  L  F  
Sbjct: 496 LFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQV 555

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
             + HP+S+EI+ +LD L   +K
Sbjct: 556 GDRSHPKSKEIFEELDRLEKRLK 578



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 219/471 (46%), Gaps = 3/471 (0%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           LK    V+  L+ SG     F     IN    F  ++ A K F  +     + W ++IKG
Sbjct: 15  LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y      ++ + +  DM  S+   N  T   +L+AC        G+QIH    K GF +N
Sbjct: 75  YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 134

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           VFV  SL+SMY   G    A  VF  L  + V     +I  Y + G+   A +VF  +  
Sbjct: 135 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 194

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            + +P+     +V++       + +GK +HGL  K G+  E  +  ++ TMY K G+ E 
Sbjct: 195 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 254

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A   F+ + + NLI W A+ISGY  +G+G +AI  F E +   I  DS  + + +   + 
Sbjct: 255 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 314

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +LEL   L G+  K  Y  D  + T L+D+YAK G +  AR + D  + K    ++ +
Sbjct: 315 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 374

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
           + G+   +    ++ + L+++ + AG+ P+  TF  LL+   +   +  G  L       
Sbjct: 375 IMGY--GLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH 432

Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
           G        + ++ +  + G ++ A+     +  +  VS W A+LSA  +H
Sbjct: 433 GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 4/280 (1%)

Query: 60  DWPQLVKISIGSG---DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           DW  LV +        DL  G+++H  + K G + +     +L  +YAK   ++VA+  F
Sbjct: 200 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 259

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           + M   + I W ++I GY ++G  E  + +  +M     + +  T    + A + +    
Sbjct: 260 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 319

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
               +  +  KS + ++ FV T LI MY   G    A  VF  +A KDV   + MI+ Y 
Sbjct: 320 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 379

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             G  + A  ++  +  +   PND TF  +++ C  +  V+EG +L  L    G+     
Sbjct: 380 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQ 439

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLIS-WTALISG 335
             + +V + G+ G   +A     ++  +  +S W AL+S 
Sbjct: 440 HYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 479


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 180/563 (31%), Positives = 289/563 (51%), Gaps = 3/563 (0%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +Q++   I SG     F+    I+   H G    A   FR ++  D+   N +I  Y + 
Sbjct: 4   DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 63

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              +    +++ +  S   PN +TF  V+  C        GKQ+HG   K+G    + V 
Sbjct: 64  NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 123

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
           N++V+MY K G    A  +FD + +R ++SWT++ISGYV++G   +A+N F E     + 
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 183

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D   L +V+   +   +L  G  +HG   K G   +  +  +L  +YAK G ++ AR  
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 243

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
            +         +NA++SG+        E+ + LF +     +  D +T    +  SA   
Sbjct: 244 FNRMEKPNLILWNAMISGYANN--GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 301

Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
            L   R L  Y  K+ Y  D  V   LI MYAKCGSI  A  +F  ++D+D+V W+ M+ 
Sbjct: 302 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 361

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
            Y LHG G+ A+ L+ EMK+ G  P+D + +G+L AC  SGL + G  LF+ +   +G+ 
Sbjct: 362 GYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIE 420

Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKR 658
           P  +H++C+VDLLGRAG L++A + I S P      +W  L+S  K+    +   +A+++
Sbjct: 421 PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQ 480

Query: 659 LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA 718
           L  L+P + G ++ +SN+YA   +    A VR  M    L+K+ G S IEI+  L  F  
Sbjct: 481 LFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQV 540

Query: 719 SGKDHPESEEIYSKLDLLNDEMK 741
             + HP+S+EI+ +LD L   +K
Sbjct: 541 GDRSHPKSKEIFEELDRLEKRLK 563



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 217/465 (46%), Gaps = 3/465 (0%)

Query: 80  VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
           V+  L+ SG     F     IN    F  ++ A K F  +     + W ++IKGY     
Sbjct: 6   VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 65

Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
            ++ + +  DM  S+   N  T   +L+AC        G+QIH    K GF +NVFV  S
Sbjct: 66  VDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNS 125

Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
           L+SMY   G    A  VF  L  + V     +I  Y + G+   A +VF  +   + +P+
Sbjct: 126 LVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPD 185

Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
                +V++       + +GK +HGL  K G+  E  +  ++ TMY K G+ E A   F+
Sbjct: 186 WIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFN 245

Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
            + + NLI W A+ISGY  +G+G +AI  F E +   I  DS  + + +   +   +LEL
Sbjct: 246 RMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLEL 305

Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
              L G+  K  Y  D  + T L+D+YAK G +  AR + D  + K    ++ ++ G+  
Sbjct: 306 ARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGY-- 363

Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
            +    ++ + L+++ + AG+ P+  TF  LL+   +   +  G  L       G     
Sbjct: 364 GLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHH 423

Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
              + ++ +  + G ++ A+     +  +  VS W A+LSA  +H
Sbjct: 424 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 157/340 (46%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +G+ +H    K G  ++ F  N+L+++YAKF ++  A+ +FD +  R+ ++WTS+I GY+
Sbjct: 103 IGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYV 162

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
            +GD    L +  +M +   K +      ++ A + +ED   G+ IH    K G E    
Sbjct: 163 QNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPD 222

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           +  SL +MY   G    A   F  +   ++   N MI  Y   G  E A  +F  +++ +
Sbjct: 223 IVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKN 282

Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
              +  T  + +    +   +E  + L G   K     +  V   ++ MY K G    A 
Sbjct: 283 IRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLAR 342

Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
            +FD +++++++ W+ +I GY   GHG +AI  + E    G+C +      ++  C    
Sbjct: 343 CVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSG 402

Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            ++ G +L      HG     +  + +VD+  + G L  A
Sbjct: 403 LVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQA 442



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 4/280 (1%)

Query: 60  DWPQLVKISIGSG---DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           DW  LV +        DL  G+++H  + K G + +     +L  +YAK   ++VA+  F
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 244

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           + M   + I W ++I GY ++G  E  + +  +M     + +  T    + A + +    
Sbjct: 245 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 304

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
               +  +  KS + ++ FV T LI MY   G    A  VF  +A KDV   + MI+ Y 
Sbjct: 305 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 364

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
             G  + A  ++  +  +   PND TF  +++ C  +  V+EG +L  L    G+     
Sbjct: 365 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQ 424

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLIS-WTALISG 335
             + +V + G+ G   +A     ++  +  +S W AL+S 
Sbjct: 425 HYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 464


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 186/632 (29%), Positives = 311/632 (49%), Gaps = 46/632 (7%)

Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI-KSGF----------ENNVFVGTSL 200
           R++ ++ +     I+ A    E  ++   +HA+A+ KS            + N+F   +L
Sbjct: 19  RNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNL 78

Query: 201 ISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN- 259
           +  Y  +G   E E+ F  L  +D    N +I  Y+ +G    A   + + +  DF  N 
Sbjct: 79  LLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY-NTMMRDFSANL 137

Query: 260 -DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
              T   ++ +   N  V  GKQ+HG  +K G    + VG+ ++ MY   G   +A+++F
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197

Query: 319 DAISERNLI------------------------------SWTALISGYVRSGHGGKAING 348
             + +RN +                              SW A+I G  ++G   +AI  
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIEC 257

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F E    G+  D     +V+  C     +  G Q+H   I+  +   + +G+AL+D+Y K
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
              L  A+ + D    K    + A++ G+ +     EE V +    QR +G++PD  T  
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ-TGRAEEAVKIFLDMQR-SGIDPDHYTLG 375

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
           + +S  A+ + L  G   H  +I +G    V V N+L+T+Y KCG ID + ++F  ++ R
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D VSW AM+SAYA  G     + LF++M + G  PD +++ GV+ AC  +GL E G   F
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
             +   YG+ P + H++CM+DL  R+GRL EAM  IN  PF    + W TL+S  +   N
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
            +    A++ L++L+P     + L+S++YA +G  D  A++R  M +  + KE G SWI+
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615

Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
              KLH F A  +  P  ++IY+KL+ LN+++
Sbjct: 616 WKGKLHSFSADDESSPYLDQIYAKLEELNNKI 647



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 197/390 (50%), Gaps = 31/390 (7%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM---- 119
           ++K+S  +G + LG+ +H  ++K G ++     + L+ +YA    +  A+K+F G+    
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204

Query: 120 --------------------------LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
                                     + + +++W ++IKG   +G  +  +    +M   
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264

Query: 154 EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREA 213
             K +++    +L AC  L     G+QIHA  I++ F+++++VG++LI MY    C   A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324

Query: 214 ENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
           + VF  +  K+V     M++ Y + G +E A  +F+ +  S  +P+ YT    IS C   
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             +EEG Q HG A+  G++  ++V N++VT+YGK G  +++ R+F+ ++ R+ +SWTA++
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI-KHGY 392
           S Y + G   + I  F + +  G+  D   L  VI  CS    +E G +       ++G 
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI 504

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
           +  +   + ++D++++ G L+ A   ++G 
Sbjct: 505 VPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 229/508 (45%), Gaps = 54/508 (10%)

Query: 80  VHAF-LLKSGS----------QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           VHA+ L+KS +          Q + F  NNL+  Y+K   +   +  F+ +  R  +TW 
Sbjct: 48  VHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWN 107

Query: 129 SLIKGYLDDGDYESVLGIACDMYRS-----EEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
            LI+GY   G    ++G A   Y +            T   +L+  S       G+QIH 
Sbjct: 108 VLIEGYSLSG----LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHG 163

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVN-------------- 229
             IK GFE+ + VG+ L+ MY + GC  +A+ VF GL  ++    N              
Sbjct: 164 QVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIED 223

Query: 230 ----------------FMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYEN 273
                            MI    + G ++ A   F  +     + + Y F +V+  C   
Sbjct: 224 ALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGL 283

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
             + EGKQ+H   ++      I VG+A++ MY K      A+ +FD + ++N++SWTA++
Sbjct: 284 GAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMV 343

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
            GY ++G   +A+  FL+    GI  D   L   I  C+  S+LE G Q HG AI  G +
Sbjct: 344 VGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI 403

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
             V +  +LV +Y K GD+  +  L +  + +    + A++S + +       + + LF 
Sbjct: 404 HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ--FGRAVETIQLFD 461

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKC 512
           +    G++PD VT + ++S  +    + +G R     + + G    +   + +I ++++ 
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521

Query: 513 GSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
           G ++ A +   G+    D + W  +LSA
Sbjct: 522 GRLEEAMRFINGMPFPPDAIGWTTLLSA 549



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 134/274 (48%), Gaps = 2/274 (0%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
           G G +  G+ +HA ++++  Q+  +  + LI++Y K   L  A+ +FD M  ++ ++WT+
Sbjct: 282 GLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTA 341

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           ++ GY   G  E  + I  DM RS    + +T    + AC+ +     G Q H  AI SG
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
             + V V  SL+++Y   G   ++  +F  +  +D      M+  Y + G +     +F 
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD 461

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV-KFGVVREISVGNAIVTMYGKH 308
            ++    +P+  T T VIS C     VE+G++   L   ++G+V  I   + ++ ++ + 
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521

Query: 309 GMSEEAERMFDAIS-ERNLISWTALISGYVRSGH 341
           G  EEA R  + +    + I WT L+S     G+
Sbjct: 522 GRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 192/643 (29%), Positives = 326/643 (50%), Gaps = 60/643 (9%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N+LI  Y++  +++ A+ +FD M  ++ I+W S++ GY  +              R +E 
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNK-------------RPQEA 148

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
            N      + +  S                    E N      L+S Y ++G   EA  V
Sbjct: 149 QN------MFDKMS--------------------ERNTISWNGLVSGYINNGMINEAREV 182

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  +  ++V     M+  Y K G    A  +F  +     E N  ++T ++    +   +
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRI 238

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
           +E  +L  +  +  VV   +    ++  Y + G   EA  +FD +  RN++SWT +I+GY
Sbjct: 239 DEACRLFDMMPEKDVVTRTN----MIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGY 294

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL-HGFAIKHGYLSD 395
           V++    + ++   +  ++    +      ++ G + C  L+   +L +   IK      
Sbjct: 295 VQN----QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK-----S 345

Query: 396 VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ 455
           V    A++  + + G++  AR + D    K    ++A++  +  K    E D + LF   
Sbjct: 346 VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGL--ELDALELFRMM 403

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
           +  G+ P+  +   +LS+ A  A L  GR +HA  +++ +  DV V + L++MY KCG++
Sbjct: 404 QREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNL 463

Query: 516 DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
             A Q+F   + +D+V WN++++ YA HGLG  AL +F +M   G  PDD++ +GVL AC
Sbjct: 464 AKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSAC 523

Query: 576 IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL 635
            Y+G  + G+ +FN +E  Y +   +EH+ACMVDLLGRAG+L+EAM+LI   P     ++
Sbjct: 524 SYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAII 583

Query: 636 WRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
           W  L+   +       + +A+K+LL LEPK+AG FIL+SN+YA QG  D+ A++R  M D
Sbjct: 584 WGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRD 643

Query: 696 LRLSKEAGCSWIEIDSKLHHFV-ASGKDHPESEEIYSKLDLLN 737
            R+SK  GCSWI ++ K+H F       HPE  EI   L+ L+
Sbjct: 644 RRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLS 686



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 226/459 (49%), Gaps = 24/459 (5%)

Query: 89  SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
           S+ +T   N L++ Y     ++ A+++FD M  R+ ++WT++++GY+ +G    ++  A 
Sbjct: 156 SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEG----MISEAE 211

Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG 208
            ++    + N  + +V+L    LL++    E    F +    E +V   T++I  Y   G
Sbjct: 212 TLFWQMPEKNVVSWTVMLGG--LLQEGRIDEACRLFDMMP--EKDVVTRTNMIGGYCQVG 267

Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS 268
              EA  +F  +  ++V     MI  Y +  + ++A  +F  +     E N+ ++T ++ 
Sbjct: 268 RLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLK 323

Query: 269 VCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
             Y N G ++E  +L         ++ +   NA++  +G++G   +A ++FD + E++  
Sbjct: 324 -GYTNCGRLDEASELFNAM----PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEG 378

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           +W+A+I  Y R G    A+  F      GI  +   L +V+  C+  +NL+ G ++H   
Sbjct: 379 TWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQL 438

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           ++  +  DV + + L+ +Y K G+L  A+ + D F+ K    +N+I++G+ +     E  
Sbjct: 439 VRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVE-- 496

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--AL 505
            + +F     +G+ PD VTF  +LS  +    + +G  +   S++T Y  +  + +   +
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN-SMETKYQVEQKIEHYACM 555

Query: 506 ITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
           + +  + G ++ A  + + +  + D + W A+L A   H
Sbjct: 556 VDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 161/368 (43%), Gaps = 43/368 (11%)

Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFT-NVISVCYENLGVEEGKQLHGLAVKFGVVR 293
           +++ G S  +  +F  L+ + F  +++  + N +   Y  LG     Q+    V F  +R
Sbjct: 71  FSQPGYSMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLG-----QIEKARVVFDEMR 125

Query: 294 EISV--GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
           + ++   N+IV  Y ++   +EA+ MFD +SERN ISW  L+SGY+ +G   +A   F  
Sbjct: 126 DKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDR 185

Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLH-----------GFAIKHGYL------- 393
             +  +   ++ +   +    +     L  Q+            G  ++ G +       
Sbjct: 186 MPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLF 245

Query: 394 -----SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDV 448
                 DV   T ++  Y + G L  ARML D    +    +  +++G+   + + + D+
Sbjct: 246 DMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGY---VQNQQVDI 302

Query: 449 MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG-NALIT 507
                 ++L  + P+    S    L     C   GR   A  +        +V  NA+I 
Sbjct: 303 -----ARKLFEVMPEKNEVSWTAMLKGYTNC---GRLDEASELFNAMPIKSVVACNAMIL 354

Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
            + + G +  A Q+F  + ++D  +W+AM+  Y   GL   AL LF  M+REG  P+  S
Sbjct: 355 CFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPS 414

Query: 568 ILGVLQAC 575
           ++ VL  C
Sbjct: 415 LISVLSVC 422



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 3/121 (2%)

Query: 53  ERTLLFNDWPQLVKI---SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRL 109
           +R  +  ++P L+ +     G  +L  G+ +HA L++S    D + A+ L+++Y K   L
Sbjct: 404 QREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNL 463

Query: 110 DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC 169
             A+++FD   V+  + W S+I GY   G     L +  DM+ S    ++ T   +L AC
Sbjct: 464 AKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSAC 523

Query: 170 S 170
           S
Sbjct: 524 S 524



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 20/200 (10%)

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR 558
           +I  N+LIT Y++ G I+ A  +F  + D++I+SWN++++ Y  +   + A  +F++M  
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 559 EGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP--ILEHFACMVDLLGRAGR 616
                + IS  G++   I +G       + NE  +++   P   +  +  MV    + G 
Sbjct: 158 R----NTISWNGLVSGYINNG-------MINEAREVFDRMPERNVVSWTAMVRGYVKEGM 206

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
           +SEA  L    P  ++ + W   V +  L+   +  I  + RL D+ P+     +  +NM
Sbjct: 207 ISEAETLFWQMP-EKNVVSW--TVMLGGLLQEGR--IDEACRLFDMMPEK--DVVTRTNM 259

Query: 677 YAGQGMLDEAAKVRTTMNDL 696
             G   +    + R   +++
Sbjct: 260 IGGYCQVGRLVEARMLFDEM 279


>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
 gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
 gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 192/683 (28%), Positives = 349/683 (51%), Gaps = 12/683 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P L+K       L  G ++H  +L +G  +D + +++L+NLYAKF  L  A+K+F+ M 
Sbjct: 49  FPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR 108

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFN--EHTCSVILEACSLLEDRIFG 178
            R  + WT++I  Y   G    ++G AC +  +E +F   +     +LE  S + +    
Sbjct: 109 ERDVVHWTAMIGCYSRAG----IVGEACSLV-NEMRFQGIKPGPVTLLEMLSGVLEITQL 163

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           + +H FA+  GF+ ++ V  S++++Y       +A+++F  +  +D+   N MI  Y   
Sbjct: 164 QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           G       +   +      P+  TF   +SV      +E G+ LH   VK G   ++ + 
Sbjct: 224 GNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK 283

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            A++TMY K G  E + R+ + I  ++++ WT +ISG +R G   KA+  F E L  G  
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
             S  +A+V+  C+   + +LG  +HG+ ++HGY  D     +L+ +YAK G L  + ++
Sbjct: 344 LSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVI 403

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP-DPVTFSRLLSLSASQ 477
            +  + +    +NAI+SG+ + +  D    ++LF + +   ++  D  T   LL   +S 
Sbjct: 404 FERMNERDLVSWNAIISGYAQNV--DLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSA 461

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  G+ +H   I++      +V  AL+ MY+KCG ++ A + F  IS +D+VSW  ++
Sbjct: 462 GALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILI 521

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
           + Y  HG G  AL ++ E    G  P+ +  L VL +C ++G+ + G+ +F+ + + +G+
Sbjct: 522 AGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV 581

Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
            P  EH AC+VDLL RA R+ +A      +    S  +   ++   +    ++   +  +
Sbjct: 582 EPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICE 641

Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
            +++L+P DAG ++ + + +A     D+ ++    M  L L K  G S IE++ K   F 
Sbjct: 642 DMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFF 701

Query: 718 ASGKDHPESEEIYSKLDLLNDEM 740
            +   H  S++  S L LL+ EM
Sbjct: 702 MNHTSH--SDDTVSLLKLLSREM 722



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 253/515 (49%), Gaps = 14/515 (2%)

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           GD++ VL     M  ++   +  T   +L+AC+ L+   FG  IH   + +GF ++ ++ 
Sbjct: 25  GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS 84

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           +SL+++Y   G    A  VF  +  +DV     MI  Y++AG    A  +   +     +
Sbjct: 85  SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
           P   T   ++S   E   + + + LH  AV +G   +I+V N+++ +Y K     +A+ +
Sbjct: 145 PGPVTLLEMLSGVLE---ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDL 201

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
           FD + +R+++SW  +ISGY   G+  + +         G+  D       +       +L
Sbjct: 202 FDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDL 261

Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
           E+G  LH   +K G+  D+ L TAL+ +Y K G  +++  +L+    K    +  ++SG 
Sbjct: 262 EMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGL 321

Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
           M       E  +++FS+   +G +      + +++  A       G S+H Y ++ GY  
Sbjct: 322 MR--LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           D    N+LITMYAKCG +D +  IF+ +++RD+VSWNA++S YA +     ALLLFEEMK
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439

Query: 558 REGFAP-DDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
            +     D  +++ +LQAC  +G    G  +   + + + +RP       +VD+  + G 
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGY 498

Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
           L  A    +S       + W+ +VS   L+A   F
Sbjct: 499 LEAAQRCFDS-------ISWKDVVSWGILIAGYGF 526


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 169/582 (29%), Positives = 292/582 (50%), Gaps = 34/582 (5%)

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           + N+F   +L+S   HS    + E +F  +  +D    N +I  ++  G    +  ++  
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 251 LLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           LL  +   P   T + +I V         G  +H   ++ G      VG+ +V MY K G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195

Query: 310 MSEEAERMFDAIS-------------------------------ERNLISWTALISGYVR 338
           +  +A R+F  +                                +R+ I+WT +++G  +
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G   +A++ F      G+  D     +++  C   +  E G Q+H +  +  Y  +V +
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFV 315

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           G+ALVD+Y+K   ++ A  +    +C+    + A++ G+ +      E+ +  FS+ ++ 
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC--SEEAVRAFSEMQMD 373

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G++PD  T   ++S  A+ A L  G   H  ++ +G    + V NAL+T+Y KCGSI+ A
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F  +S  D VSW A+++ YA  G  K  + LFE+M   G  PD ++ +GVL AC  +
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRA 493

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           GL E G   F+ +++ + + PI +H+ CM+DL  R+GR  EA   I   P S     W T
Sbjct: 494 GLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+S  +L  N +    A++ LL+ +P++  S++L+ +M+A +G   E A +R  M D ++
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
            KE GCSWI+  +K+H F A  + HP S  IY KL+ LN +M
Sbjct: 614 KKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 189/384 (49%), Gaps = 32/384 (8%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK------------------ 105
           ++ ++    D  LG +VH  +L+ G     F  + L+++YAK                  
Sbjct: 152 MIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKT 211

Query: 106 ---FNRL----------DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
              +N L          + A+ LF  M+ R +ITWT+++ G   +G     L +   M  
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
                +++T   IL AC  L     G+QIHA+  ++ +E+NVFVG++L+ MY      R 
Sbjct: 272 EGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           AE VFR +  +++     MI+ Y +   SE A   F  +     +P+D+T  +VIS C  
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
              +EEG Q H LA+  G++R I+V NA+VT+YGK G  E+A R+FD +S  + +SWTAL
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HG 391
           ++GY + G   + I+ F + L  G+  D      V+  CS    +E G        K H 
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHD 511

Query: 392 YLSDVRLGTALVDIYAKGGDLKSA 415
            +      T ++D+Y++ G  K A
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEA 535



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 244/552 (44%), Gaps = 77/552 (13%)

Query: 70  GSGDLKLGQAVHAFLLKSGSQ-NDTFEANNLINLYAKFNRLDVAQKLFDGM--------- 119
           G   +++  AVH  +LK+  Q   TF  N+L+  YAK  RL  A+++FD M         
Sbjct: 24  GRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRN 83

Query: 120 ----------LV------------RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE-K 156
                     LV            R A+++ +LI G+   G     + +   + R E  +
Sbjct: 84  ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
               T S ++   S L DR  G  +H   ++ GF    FVG+ L+ MY   G  R+A  V
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203

Query: 217 FRGLAYKDV-----------RC--------------------VNFMILEYNKAGESEMAF 245
           F+ +  K V           RC                       M+    + G    A 
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263

Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
            VF  + +     + YTF ++++ C      EEGKQ+H    +      + VG+A+V MY
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMY 323

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K      AE +F  ++ RN+ISWTA+I GY ++    +A+  F E    GI  D   L 
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           +VI  C+  ++LE G Q H  A+  G +  + +  ALV +Y K G ++ A  L D  S  
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               + A+++G+ +      ++ + LF +  + G++PD VTF  +LS + S+A LV    
Sbjct: 444 DQVSWTALVTGYAQ--FGKAKETIDLFEKMLVNGLKPDGVTFIGVLS-ACSRAGLVEKGC 500

Query: 486 LHAYSIKTGYAADVIVGN----ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAY 540
            +  S++  +  D++  +     +I +Y++ G    A +  K +    D   W  +LS+ 
Sbjct: 501 DYFDSMQKDH--DIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSC 558

Query: 541 ALHG---LGKGA 549
            L G   +GK A
Sbjct: 559 RLRGNMEIGKWA 570


>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 597

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 176/548 (32%), Positives = 289/548 (52%), Gaps = 1/548 (0%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           IL+ C   ED   G  IH+  I++GF++N+ + T LI  Y   G    A  VF  +  ++
Sbjct: 43  ILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERN 102

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           V      I  Y K G  + A  VF  +  +    N +T+ +V+  C     +E G Q+HG
Sbjct: 103 VVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG 162

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
              K   +  + V +A+V ++ K G  E+A  +F+ +SER+++SW A+I GY        
Sbjct: 163 CIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDD 222

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           +   F   +  G+  D   L +V+   S  +NL    Q+HG  I+ G+ S + L  +L+D
Sbjct: 223 SFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLID 282

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
            YAK   +KSA  L      K    F AI++G+  K +   E  + LF   +   ME D 
Sbjct: 283 AYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSRE-ALDLFKDMQHIFMEIDD 341

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           VTF  +L++ A  A L  GR +HA +IK   + DV  GNAL+ MYAK G I+ A + F  
Sbjct: 342 VTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYE 401

Query: 525 ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           + +++++SW ++++ Y  HG G  A+ L+++M+ EG  P+DI+ L +L AC +SGL+  G
Sbjct: 402 MKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEG 461

Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
              FN +   Y + P  EH++CM+DL  R G+L EA N+I       +  LW  ++    
Sbjct: 462 WECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACS 521

Query: 645 LMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGC 704
           +  +     +A+  LL ++P+++ ++++++ +YA  G  D+A ++R  M    L K  G 
Sbjct: 522 IYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKKIPGY 581

Query: 705 SWIEIDSK 712
           S I+  +K
Sbjct: 582 SIIQSTNK 589



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 250/489 (51%), Gaps = 9/489 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           + +++++ I + DLK G  +H+ ++++G  ++   +  LI  Y KF     A+K+FD M 
Sbjct: 40  YMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMP 99

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ ++WT+ I GY  +G Y+  L +   M R+  + N+ T   +L AC+ L     G Q
Sbjct: 100 ERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQ 159

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           IH    K+ F  N+FV ++L+ ++   G   +A  +F  ++ +DV   N +I  Y     
Sbjct: 160 IHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDF 219

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
           ++ +F +F  ++     P+ +T  +V+        + +  Q+HG+ ++ G    I +  +
Sbjct: 220 NDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGS 279

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS-GHGGKAINGFLEFLDLGICC 359
           ++  Y K    + A  ++ ++ ++++IS+TA+++GY R   +  +A++ F +   + +  
Sbjct: 280 LIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEI 339

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           D     T+++ C+  ++L +G Q+H  AIK+    DV  G ALVD+YAK G+++ A    
Sbjct: 340 DDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAF 399

Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
                K    + ++++G+ +     E   + L+ +    G++P+ +TF  LL  + S + 
Sbjct: 400 YEMKEKNVISWTSLITGYGKHGYGHE--AIALYKKMEYEGLKPNDITFLSLL-FACSHSG 456

Query: 480 LVRGRSLHAYS---IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNA 535
           L  G     ++    K          + +I ++A+ G ++ A+ +   ++ +   S W A
Sbjct: 457 LT-GEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGA 515

Query: 536 MLSAYALHG 544
           +L A +++G
Sbjct: 516 ILGACSIYG 524



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 166/314 (52%), Gaps = 3/314 (0%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  ++ +C E   +++G  +H   ++ G    + +   ++  Y K G +  A ++FD + 
Sbjct: 40  YMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMP 99

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ERN++SWTA ISGY ++GH   A+  F +    G+  +     +V+  C+    LE G+Q
Sbjct: 100 ERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQ 159

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +HG   K+ ++ ++ + +ALVD+++K G+++ AR L +  S +    +NA++ G+  +  
Sbjct: 160 IHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQ-- 217

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D  +D   +F      G+ PD  T   +L  S+    L++   +H   I+ G+ + + + 
Sbjct: 218 DFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLN 277

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH-GLGKGALLLFEEMKREGF 561
            +LI  YAK   +  A  ++K +  +D++S+ A+++ YA      + AL LF++M+    
Sbjct: 278 GSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFM 337

Query: 562 APDDISILGVLQAC 575
             DD++   +L  C
Sbjct: 338 EIDDVTFCTMLNVC 351



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 2/214 (0%)

Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
           SS    ++  C    +L+ G  +H   I++G+ S++ L T L+  Y K G+  +AR + D
Sbjct: 37  SSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFD 96

Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               +    + A +SG+ +      +D +++FSQ   AG+  +  T+  +L       CL
Sbjct: 97  RMPERNVVSWTAQISGYAKN--GHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCL 154

Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
            RG  +H    K  +  ++ V +AL+ +++KCG+++ A  +F+ +S+RD+VSWNA++  Y
Sbjct: 155 ERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGY 214

Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
           A       +  +F  M  EG  PD  ++  VL+A
Sbjct: 215 AAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKA 248


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 165/479 (34%), Positives = 257/479 (53%), Gaps = 2/479 (0%)

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
            +I  C     +EEG+++H       + R   + N +V MYGK G   EA+R+FDA+  +
Sbjct: 46  QLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHK 105

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           N+ SWT L++G+V+SG G +AI  F      G   D   L   ID C     L  G ++H
Sbjct: 106 NVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIH 165

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
             A   G  SD+    A++++Y K G +  A  +      K    ++ +++ F +    D
Sbjct: 166 SAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELAD 225

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
           E   ++ F   +  GME D +T+  +L    S   L  G++LH   +  G    ++VGN 
Sbjct: 226 E--ALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNT 283

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
           L+ MY KCGS D A  +F  + ++++VSWNAML+AY  +G  + AL LF+ M  EG  P+
Sbjct: 284 LVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPN 343

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
           DI+ + +L  C +SG  +  +  F E+ Q +G+ P   HF C++D+LGR+G+L EA  LI
Sbjct: 344 DITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELI 403

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
            + P     +LW +L+       +   +  A++     EP+ A ++I++SN+YA     D
Sbjct: 404 QAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWD 463

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK 743
           EAAKVR  M    + K+AG SWIEID ++H FVA    HP+   I+  L  L  EM++K
Sbjct: 464 EAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIK 522



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 180/368 (48%), Gaps = 9/368 (2%)

Query: 60  DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
           D  QL++   G+  L+ G+ +H ++         F +N L+++Y K   L  A+++FD M
Sbjct: 43  DLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAM 102

Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             ++  +WT L+ G++  G     + +   M +  E  +       +++C   +    G 
Sbjct: 103 QHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGR 162

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           +IH+ A   G ++++    ++I+MY   G   EA  VF  +  K+V   + MI  + +  
Sbjct: 163 EIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNE 222

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVG 298
            ++ A   F  +     E +  T+ +V+   Y ++G +E GK LH   V  G+   I VG
Sbjct: 223 LADEALLFFKLMQQEGMELDRITYVSVLDA-YTSVGALELGKALHVRIVYAGLDTSIVVG 281

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GI 357
           N +V MYGK G  ++A  +FD++ E+N++SW A+++ Y ++G   +A+  F + +DL G+
Sbjct: 282 NTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALF-DSMDLEGV 340

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY---LSDVRLGTALVDIYAKGGDLKS 414
             +     T++  CS     +  +  H   ++  +     +V  G  L+D+  + G L+ 
Sbjct: 341 RPNDITFVTILYCCSHSGKFKDAVS-HFVEMRQDFGITPREVHFG-CLIDMLGRSGKLEE 398

Query: 415 ARMLLDGF 422
           A  L+   
Sbjct: 399 AEELIQAM 406



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 6/369 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G +IH +      +   F+   L+ MY   G   EA+ VF  + +K+V     ++  + +
Sbjct: 60  GRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQ 119

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           +G    A  +F  +      P+       I  C     + +G+++H  A   G+  ++  
Sbjct: 120 SGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVT 179

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
            NAI+ MYGK G   EA  +F  + E+N+ISW+ +I+ + ++    +A+  F      G+
Sbjct: 180 ANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGM 239

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D     +V+D  +    LELG  LH   +  G  + + +G  LV++Y K G    AR 
Sbjct: 240 ELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARD 299

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + D    K    +NA+L+ + +       + + LF    L G+ P+ +TF  +L    S 
Sbjct: 300 VFDSMVEKNVVSWNAMLAAYGQN--GRSREALALFDSMDLEGVRPNDITFVTIL-YCCSH 356

Query: 478 ACLVRGRSLHAYSIKT--GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWN 534
           +   +    H   ++   G     +    LI M  + G ++ A ++ + +    D V W 
Sbjct: 357 SGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWT 416

Query: 535 AMLSAYALH 543
           ++L A   H
Sbjct: 417 SLLCACVTH 425


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 167/510 (32%), Positives = 276/510 (54%), Gaps = 4/510 (0%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N  + E  K  +   A  ++  +L     PN +TF   +  C        G Q HG   K
Sbjct: 9   NTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITK 68

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDA--ISERNLISWTALISGYVRSGHGGKAI 346
            G V E  V   +++MY K  + + A ++F+    S +  + + AL+SGYV +     A+
Sbjct: 69  VGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAV 128

Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
             F +  + G+  +S  L  +I  C    NLELG  LH   +K+G+ SDV +    + +Y
Sbjct: 129 LLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMY 188

Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
            K G +  A+ L D    K    +NA++SG+ +       +V+ L+    + G+ PDPVT
Sbjct: 189 MKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQN--GLATNVLELYRNMDMNGVHPDPVT 246

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
              +LS  A+      G  +      +G+ ++  + NALI MYA+CG++  A  +F G+ 
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 306

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
           +R +VSW A++  Y +HG G+ A+ LF+EM R G  PD  + + VL AC ++GL++ G+ 
Sbjct: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 366

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
            F  +++ Y L P  EH++CMVDLLGRAGRL EA  LI S P      +W  L+   K+ 
Sbjct: 367 YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIH 426

Query: 647 ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSW 706
            N + + LA +R+++LEP++ G ++L+SN+Y+         ++R  M + +L K+ GCS+
Sbjct: 427 KNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSY 486

Query: 707 IEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
           +E+  ++H F+   ++H +S+EIY  L+ L
Sbjct: 487 VELKGRVHPFIVGDRNHLQSDEIYRVLEEL 516



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 199/460 (43%), Gaps = 11/460 (2%)

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
           +  W + ++       +   L +   M R  ++ N  T    L++C+ L   I G Q H 
Sbjct: 5   STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 64

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG--LAYKDVRCVNFMILEYNKAGES 241
              K G     FV T LISMY        A  VF     + K   C N ++  Y    + 
Sbjct: 65  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 124

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
             A  +F  +       N  T   +I  C   + +E G  LH   +K+G   ++SV N  
Sbjct: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCF 184

Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
           +TMY K G    A+++FD +  + LISW A++SGY ++G     +  +      G+  D 
Sbjct: 185 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 244

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             L  V+  C+      +G ++       G+ S+  L  AL+++YA+ G+L  A+ + DG
Sbjct: 245 VTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDG 304

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
              +    + AI+ G+   +    E  + LF +   +G+EPD   F  +LS + S A L 
Sbjct: 305 MPERTLVSWTAIIGGY--GMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS-ACSHAGLT 361

Query: 482 RGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLS 538
                +   +K  Y  +    +   ++ +  + G +  A  + + +  + D   W A+L 
Sbjct: 362 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 421

Query: 539 AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
           A  +H   + A L FE +      P++I    VL + IYS
Sbjct: 422 ACKIHKNVELAELAFERVIE--LEPENIGYY-VLLSNIYS 458



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 182/407 (44%), Gaps = 8/407 (1%)

Query: 76  LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT--WTSLIKG 133
           LG   H  + K G   + F    LI++Y K + +D A+K+F+       +T  + +L+ G
Sbjct: 58  LGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSG 117

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y+ +      + +   M       N  T   ++ AC    +   G  +H   +K GF+++
Sbjct: 118 YVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSD 177

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V V    I+MY   G    A+ +F  +  K +   N M+  Y + G +     ++ ++  
Sbjct: 178 VSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDM 237

Query: 254 SDFEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
           +   P+  T   V+S C  NLG +  G ++       G      + NA++ MY + G   
Sbjct: 238 NGVHPDPVTLVGVLSSC-ANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLT 296

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A+ +FD + ER L+SWTA+I GY   GHG  A+  F E +  GI  D +    V+  CS
Sbjct: 297 KAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 356

Query: 373 VCSNLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
                + GL+      ++  L       + +VD+  + G LK A+ L++    K      
Sbjct: 357 HAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 416

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
             L G   KI  + E   + F  +R+  +EP+ + +  LLS   S A
Sbjct: 417 GALLGAC-KIHKNVELAELAF--ERVIELEPENIGYYVLLSNIYSNA 460



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 145/306 (47%), Gaps = 22/306 (7%)

Query: 46  ISSVSCSERTLLFNDWPQ------------LVKISIGSGDLKLGQAVHAFLLKSGSQNDT 93
           +S+  CS+  LLF    +            L+   +   +L+LG ++H   LK G  +D 
Sbjct: 119 VSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDV 178

Query: 94  FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
              N  I +Y K   ++ AQKLFD M V+  I+W +++ GY  +G   +VL    ++YR+
Sbjct: 179 SVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVL----ELYRN 234

Query: 154 EEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGC 209
            +    H   V    +L +C+ L  +  G ++      SGF +N F+  +LI+MY   G 
Sbjct: 235 MDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGN 294

Query: 210 FREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISV 269
             +A+ VF G+  + +     +I  Y   G  E+A  +F  ++ S  EP+   F  V+S 
Sbjct: 295 LTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSA 354

Query: 270 CYENLGVEEGKQLHGLAVK-FGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLI 327
           C      ++G +   +  + + +       + +V + G+ G  +EA+ + +++  + +  
Sbjct: 355 CSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGA 414

Query: 328 SWTALI 333
            W AL+
Sbjct: 415 VWGALL 420


>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
          Length = 667

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 178/551 (32%), Positives = 293/551 (53%), Gaps = 16/551 (2%)

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI---LEYNKAGESEMAFHVFVHLLSS 254
            +++S YF  G   EA  +F G + +D    N ++   ++ +K GE       F+ +  S
Sbjct: 85  NTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGE---GLTHFMKMRCS 141

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              P+++T+  +I  C  +LG   G+Q+H   VK     +  +G  ++ MY + G   +A
Sbjct: 142 SVRPDNFTYAIIIPCC--DLGF--GQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDA 197

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
            ++FD +  R L++W A+IS Y + G G K+I  F +    GI  D    A V++  +  
Sbjct: 198 RKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAAR 257

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
             +   +Q+H   I+ G+ SD     ALV++Y+K G + SA  L +    +    +  I+
Sbjct: 258 WQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVII 317

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
            GF++  +   E+ M LF Q +L  +EP+  TF  LL   A      +GR  H   +K G
Sbjct: 318 VGFLQ--SGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFG 375

Query: 495 Y-AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
              ADV+VG+A++ MY+KCG +  A + F+ + +RDI SWN ++  YA +G G  AL L+
Sbjct: 376 LLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLY 435

Query: 554 EEM---KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
            EM      G AP++++ +GVL AC ++GL + G   F E+   + ++P  EH+ CMVDL
Sbjct: 436 NEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDL 495

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
           LGRAG L EA  LI + P     ++W  L+   KL  + + +   ++ L   EP+++ ++
Sbjct: 496 LGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNY 555

Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
           +L++N Y   G   EA ++R  M    + K AGCSW+EI + +H F+A    HP+ E   
Sbjct: 556 VLLANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHSFLAGDXLHPQIEVAS 615

Query: 731 SKLDLLNDEMK 741
             L  L  +M+
Sbjct: 616 QVLPRLYLQMR 626



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 180/360 (50%), Gaps = 9/360 (2%)

Query: 67  ISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT 126
           I I   DL  GQ VHA ++K  S  D F   NL+ +YA+   +  A+K+FDGM  R  +T
Sbjct: 152 IIIPCCDLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVT 211

Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
           W ++I  Y   G  +  +G+   + R     +E+T +++L   +         Q+H+  I
Sbjct: 212 WNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLII 271

Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           + GF ++ F   +L+++Y   G    A  +F  +  +DV     +I+ + ++G  E A  
Sbjct: 272 ERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMW 331

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV-REISVGNAIVTMY 305
           +F  +   D EPN +TF  ++  C +    ++G+  HGL +KFG++  ++ VG+A+V MY
Sbjct: 332 LFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMY 391

Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
            K G   +A R F  + ER++ SW  +I GY ++G G KA+  + E + LG    +    
Sbjct: 392 SKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEV 451

Query: 366 TVIDGCSVCSNLELGLQLHGFAI------KHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
           T +     CS+   GL   G++       KH         T +VD+  + G L+ A  L+
Sbjct: 452 TFVGVLCACSH--NGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALI 509



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 218/467 (46%), Gaps = 12/467 (2%)

Query: 84  LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
           LL    Q      N +++ Y KF  +  A KLFDG   R   +W  ++ G + +      
Sbjct: 72  LLHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEG 131

Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
           L     M  S  + +  T ++I+  C    D  FG+Q+HA  +K   + + F+GT+L+ M
Sbjct: 132 LTHFMKMRCSSVRPDNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRM 187

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTF 263
           Y   G   +A  VF G+  + +   N MI  Y+K G  + +  +F  L       ++YT+
Sbjct: 188 YAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTY 247

Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
             V++       V E  Q+H L ++ G   +    NA+V +Y K G    A R+F+ I +
Sbjct: 248 AIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPD 307

Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
           ++++SWT +I G+++SGH  +A+  F +     I  +S     ++  C+  +  + G   
Sbjct: 308 QDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHF 367

Query: 384 HGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           HG  +K G L +DV +G+A+VD+Y+K G++  A         +  A +N I+ G+ +  A
Sbjct: 368 HGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGA 427

Query: 443 DDEEDVMVLFSQQRL---AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADV 499
             +   + L+++  L   +G+ P+ VTF  +L   +    L  G S     +        
Sbjct: 428 GMK--ALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPT 485

Query: 500 IVG-NALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHG 544
                 ++ +  + G +  A  +   +  + D V W A+L A  LHG
Sbjct: 486 AEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHG 532



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 23/202 (11%)

Query: 499 VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL-HGLGKGALLLFEEMK 557
           V+  N +++ Y K G +  A ++F G S RD  SWN +LS     H LG+G L  F +M+
Sbjct: 81  VVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEG-LTHFMKMR 139

Query: 558 REGFAPDDISILGVLQAC-------IYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
                PD+ +   ++  C       +++ + +  +C  ++++   G          ++ +
Sbjct: 140 CSSVRPDNFTYAIIIPCCDLGFGQQVHADIVK--VC--SDLDAFIGTN--------LLRM 187

Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL-DLEPKDAGS 669
               G + +A  + +  P S   + W  ++S          SI   ++L  +    D  +
Sbjct: 188 YAEVGEIGDARKVFDGMP-SRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYT 246

Query: 670 FILVSNMYAGQGMLDEAAKVRT 691
           + +V N +A +  + EA +V +
Sbjct: 247 YAIVLNEFAARWQVFEAMQVHS 268


>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
 gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 566

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 176/548 (32%), Positives = 290/548 (52%), Gaps = 13/548 (2%)

Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY-KDVRCVNFMILEYNKAGESEMA 244
           + SGF +     TSLI+MY       EA  VFR   + ++V   N +I  +   G +   
Sbjct: 2   VTSGFIHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADG 61

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
           F  +  + S    P+ +TF  V+  C E +   E +++HG   K G+   + VG+A+V  
Sbjct: 62  FQFYKRMRSVGVMPDKFTFPCVVRACCEFM---EVRKIHGCLFKMGLELNVFVGSALVNT 118

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K   +E+AE++F+ + ER+++ W A+I+GY + GH  KA+  F    + GI       
Sbjct: 119 YLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTT 178

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
            +++   +   ++  G  +HG   K GY S V +  AL+D+Y K    + A M+ +  + 
Sbjct: 179 TSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINE 238

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    +N+I+S   +   DD +  + LF +   + + PD +T + +L   +  A L+ GR
Sbjct: 239 KDLFSWNSIISAHEQ--CDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGR 296

Query: 485 SLHAYSIKTGYAA-----DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
            +H Y I  G        DV++ NA++ MYAKCG +  A  IF  + ++D+ SWN M+  
Sbjct: 297 EIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMG 356

Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
           YA+HG G  AL +F  M      PD ++ +GVL AC ++G    G      +E  +G+ P
Sbjct: 357 YAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIP 416

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            +EH+ C++D+LGRAG L EA +L    P  ++ +LW  L+   +L  N++   +  +++
Sbjct: 417 TIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKI 476

Query: 660 LDLEPKD--AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
             LEPK   +GS+IL+S++Y   G  +EA +VR TM +  + K  GCSWIE+   L+ F 
Sbjct: 477 TQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFS 536

Query: 718 ASGKDHPE 725
              + H E
Sbjct: 537 MGDRTHHE 544



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 229/465 (49%), Gaps = 31/465 (6%)

Query: 97  NNLINLYAKFNRLDVAQKLF-DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
            +LIN+Y++ N+++ A  +F D    R+   + ++I G++ +G       +A D ++  +
Sbjct: 14  TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANG-------LAADGFQFYK 66

Query: 156 KF-------NEHTCSVILEAC-SLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
           +        ++ T   ++ AC   +E R    +IH    K G E NVFVG++L++ Y   
Sbjct: 67  RMRSVGVMPDKFTFPCVVRACCEFMEVR----KIHGCLFKMGLELNVFVGSALVNTYLKV 122

Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
               +AE VF  L  +DV   N MI  Y K G    A  VF  +       + +T T+++
Sbjct: 123 DGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSIL 182

Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
           S+      +  G+ +HG+  K G    ++V NA++ MYGK   +E+A  +F+ I+E++L 
Sbjct: 183 SILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLF 242

Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
           SW ++IS + +       +  F + L   +  D   +  V+  CS  + L  G ++HG+ 
Sbjct: 243 SWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYM 302

Query: 388 IKHGYLS-----DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF-MEKI 441
           I +G        DV L  A++D+YAK G +K+A ++ D    K  A +N ++ G+ M   
Sbjct: 303 IVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGY 362

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-LHAYSIKTGYAADVI 500
             +  D   +F +   A ++PD VTF  +LS  +    + +GRS L    ++ G    + 
Sbjct: 363 GTEALD---MFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIE 419

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRD-IVSWNAMLSAYALHG 544
               +I M  + G +  A+ + + I   D ++ W A+L A  LHG
Sbjct: 420 HYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHG 464



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 155/344 (45%), Gaps = 6/344 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +H  L K G + + F  + L+N Y K +  + A+K+F+ +  R  + W ++I GY   
Sbjct: 94  RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKI 153

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           G     + +   M       +  T + IL   + + D   G  IH    K G+ + V V 
Sbjct: 154 GHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVS 213

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +LI MY       +A  +F  +  KD+   N +I  + +  + +    +F  +L S   
Sbjct: 214 NALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVL 273

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR-----EISVGNAIVTMYGKHGMSE 312
           P+  T T V+  C     +  G+++HG  +  G+ +     ++ + NAI+ MY K G  +
Sbjct: 274 PDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMK 333

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
            A+ +FD +  +++ SW  +I GY   G+G +A++ F    +  I  D      V+  CS
Sbjct: 334 NADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACS 393

Query: 373 VCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
               +  G   L    ++ G +  +   T ++D+  + G L  A
Sbjct: 394 HAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEA 437



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 131/277 (47%), Gaps = 7/277 (2%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++ I    GD+  G+A+H  + K G  +    +N LI++Y K    + A  +F+ +  + 
Sbjct: 181 ILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKD 240

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W S+I  +    D++  L +   M  S    +  T + +L ACS L   + G +IH 
Sbjct: 241 LFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHG 300

Query: 184 FAIKSGFENN-----VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           + I +G   N     V +  +++ MY   GC + A+ +F  +  KDV   N MI+ Y   
Sbjct: 301 YMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMH 360

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISV 297
           G    A  +F  +  +  +P+  TF  V+S C     V +G+  L  + ++FGV+  I  
Sbjct: 361 GYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEH 420

Query: 298 GNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALI 333
              I+ M G+ G   EA  +   I  E NLI W AL+
Sbjct: 421 YTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALL 457


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 158/491 (32%), Positives = 284/491 (57%), Gaps = 5/491 (1%)

Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
           ++ +C  N  V E K  HG  ++  +  ++++ N ++  Y K G  E A ++FD + ER+
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV-CSNLELGLQLH 384
           L+SW  +I  Y R+    +A++ FLE  + G       +++V+  C V C  LE   +LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK-KLH 185

Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADD 444
             ++K     ++ +GTAL+D+YAK G +K A  + +    K +  ++++++G+++    +
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN--KN 243

Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
            E+ ++L+ + +   +E +  T S ++   ++ A L+ G+ +HA   K+G+ ++V V ++
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303

Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPD 564
            + MYAKCGS+  ++ IF  + ++++  WN ++S +A H   K  ++LFE+M+++G  P+
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363

Query: 565 DISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLI 624
           +++   +L  C ++GL E G   F  +   YGL P + H++CMVD+LGRAG LSEA  LI
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423

Query: 625 NSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLD 684
            S PF  +  +W +L++  ++  N + + +A+++L +LEP++AG+ +L+SN+YA     +
Sbjct: 424 KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWE 483

Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD-LLNDEMKLK 743
           E AK R  + D  + K  G SWI+I  K+H F      HP   EI S LD L+    K  
Sbjct: 484 EIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543

Query: 744 VKDSSAFELQD 754
            K S   EL D
Sbjct: 544 YKPSVEHELHD 554



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 200/389 (51%), Gaps = 4/389 (1%)

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
           S E  N +    IL+ C+     +  +  H   I+   E +V +   LI+ Y   G    
Sbjct: 55  SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL 114

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF G+  + +   N MI  Y +      A  +F+ + +  F+ +++T ++V+S C  
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 174

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
           N    E K+LH L+VK  +   + VG A++ +Y K GM ++A ++F+++ +++ ++W+++
Sbjct: 175 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 234

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
           ++GYV++ +  +A+  +     + +  +   L++VI  CS  + L  G Q+H    K G+
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 294

Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLF 452
            S+V + ++ VD+YAK G L+ + ++      K    +N I+SGF +     E  VM+LF
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKE--VMILF 352

Query: 453 SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT-GYAADVIVGNALITMYAK 511
            + +  GM P+ VTFS LLS+      +  GR        T G + +V+  + ++ +  +
Sbjct: 353 EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412

Query: 512 CGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
            G +  A+++ K I  D     W ++L++
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLLAS 441



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 176/367 (47%), Gaps = 1/367 (0%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           +++++   +G +   +A H  +++   + D    N LIN Y+K   +++A+++FDGML R
Sbjct: 66  EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           S ++W ++I  Y  +      L I  +M     KF+E T S +L AC +  D +  +++H
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
             ++K+  + N++VGT+L+ +Y   G  ++A  VF  +  K     + M+  Y +    E
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  ++        E N +T ++VI  C     + EGKQ+H +  K G    + V ++ V
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G   E+  +F  + E+NL  W  +ISG+ +     + +  F +    G+  +  
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365

Query: 363 CLATVIDGCSVCSNLELGLQLHGF-AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             ++++  C     +E G +        +G   +V   + +VDI  + G L  A  L+  
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425

Query: 422 FSCKYTA 428
                TA
Sbjct: 426 IPFDPTA 432


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 194/598 (32%), Positives = 302/598 (50%), Gaps = 11/598 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
           +LE+       I G  IHA  I++       F+   L++MY        A++V      +
Sbjct: 12  LLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLR 71

Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
            V     +I           A   F ++   + +PND+TF  V            GKQ+H
Sbjct: 72  TVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIH 131

Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           GLA+K G++ ++ VG +   MY K G   +A  MFD + +RNL +W A IS  V+     
Sbjct: 132 GLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSL 191

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
            AI  F EFL +    +S      ++ C     L LG QLH F ++ GY  DV +   L+
Sbjct: 192 DAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLI 251

Query: 404 DIYAKGGDLKSARMLLDGF-SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           D Y K GD+ SA M+ +   + K    + ++L+  ++    +EE   ++F Q R   +EP
Sbjct: 252 DFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQN--HEEERACMVFLQAR-KEVEP 308

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
                S +LS  A    L  GRS+HA ++K     ++ VG+AL+ MY KCGSI+ A Q+F
Sbjct: 309 TDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVF 368

Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK--REGFAPDDISILGVLQACIYSGL 580
             + +R++V+WNAM+  YA  G    AL LFEEM     G  P  ++++ +L  C   G 
Sbjct: 369 SELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGA 428

Query: 581 SEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
            E GI +F  +   YG+ P  EHFAC+VDLLGR+G +  A   I +     +  +W  L+
Sbjct: 429 VERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALL 488

Query: 641 SVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSK 700
              ++   ++   +A+++L +L+  D+G+ +++SNM A  G  +EA  VR  M D+ + K
Sbjct: 489 GACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKK 548

Query: 701 EAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDS--SAFELQD 754
             G SWI + +++H F A    H  + EI + L  L   MK    V D+  S F+L+D
Sbjct: 549 NVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLED 606



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 249/490 (50%), Gaps = 15/490 (3%)

Query: 76  LGQAVHAFLLKSG-SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           LG+ +HA ++++  +   +F +N+L+N+Y+K + L+ AQ +     +R+ +TWTSLI G 
Sbjct: 24  LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGC 83

Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
           + +  +   L    +M R   + N+ T   + +A + ++  + G+QIH  A+K G   +V
Sbjct: 84  VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143

Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
           FVG S   MY  +G   +A N+F  +  +++   N  I    +   S  A   F   L  
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCV 203

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
             EPN  TF   ++ C + + +  G+QLH   V+ G   ++SV N ++  YGK G    A
Sbjct: 204 HGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSA 263

Query: 315 ERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           E +F+ I  R N++SW ++++  V++    +A   FL+        D   +++V+  C+ 
Sbjct: 264 EMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFM-ISSVLSACAE 322

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
              LELG  +H  A+K     ++ +G+ALVD+Y K G +++A  +      +    +NA+
Sbjct: 323 LGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAM 382

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLA--GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           + G+  +   D +  + LF +  L   G+ P  VT   +LS+ +    + RG  +   S+
Sbjct: 383 IGGYAHQ--GDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFE-SM 439

Query: 492 KTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---L 545
           +  Y  +    +   ++ +  + G +D A++  + ++ +  +S W A+L A  +HG   L
Sbjct: 440 RLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTEL 499

Query: 546 GK-GALLLFE 554
           GK  A  LFE
Sbjct: 500 GKIAAEKLFE 509



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 12/268 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR-SAITWTSLIK 132
           L LG+ +HAF+++ G + D   AN LI+ Y K   +  A+ +F+ +  R + ++W S++ 
Sbjct: 225 LNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLA 284

Query: 133 GYLDDGDYESVLGIACDMY---RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
             + + + E     AC ++   R E +  +   S +L AC+ L     G  +HA A+K+ 
Sbjct: 285 ALVQNHEEER----ACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 340

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF- 248
            E+N+FVG++L+ MY   G    AE VF  L  +++   N MI  Y   G+ +MA  +F 
Sbjct: 341 VEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFE 400

Query: 249 -VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYG 306
            + L S    P+  T  +++SVC     VE G Q+   + + +G+         +V + G
Sbjct: 401 EMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLG 460

Query: 307 KHGMSEEAERMFDAISERNLIS-WTALI 333
           + G+ + A      ++ +  IS W AL+
Sbjct: 461 RSGLVDRAYEFIQNMAIQPTISVWGALL 488



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 46/73 (63%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L+LG++VHA  +K+  +++ F  + L+++Y K   ++ A+++F  +  R+ +TW ++I
Sbjct: 324 GGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMI 383

Query: 132 KGYLDDGDYESVL 144
            GY   GD +  L
Sbjct: 384 GGYAHQGDIDMAL 396


>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1251

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 197/640 (30%), Positives = 320/640 (50%), Gaps = 11/640 (1%)

Query: 114  KLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
            K F G+   S   W   ++  ++  D    L +  +M R   + N  T   + +AC+ L 
Sbjct: 605  KCFPGL--SSVNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 662

Query: 174  DRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMIL 233
               + E +H   IKS F ++VFVGT+ + M+        A  VF  +  +D    N M+ 
Sbjct: 663  YIGYCEMVHTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLS 722

Query: 234  EYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR 293
             + ++G ++  F +F  +   +  P+  T   +I        ++  K +H   ++ GV  
Sbjct: 723  GFCQSGHTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDL 782

Query: 294  EISVGNAIVTMYGKHGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAINGFLE 351
            + +V N  ++ YGK G  + A+ +F+AI   +R ++SW ++   +   G    A   +  
Sbjct: 783  QATVSNTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRL 842

Query: 352  FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGD 411
             L      D S    +   C     L  G  +H  AI  G   D+      + +Y+K GD
Sbjct: 843  MLRDEFKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGD 902

Query: 412  LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
              SAR+L D    +    +  ++SG+ EK   D ++ + LF      G+ PD VT   L+
Sbjct: 903  SCSARLLFDIMPSRTCVSWTVMISGYAEK--GDMDEALALFHAMAKTGVNPDLVTLLSLI 960

Query: 472  SLSASQACLVRGRSLHAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
            S       L  G+ +   +   G   D V+V NALI MY+KCGSID A  IF   S++ +
Sbjct: 961  SGCGKFGSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTM 1020

Query: 531  VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
            V+W  M++ YAL+G+   A+ LF +M    + P+ I+ L VLQAC +SG  E G   F+ 
Sbjct: 1021 VTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHI 1080

Query: 591  IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
            ++Q+Y + P L+H++CMVDLLGR G+L EA+ LI++        +W  L+S  K+  N K
Sbjct: 1081 MKQVYNISPGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVK 1140

Query: 651  FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
             +  A+  L +LEP+ A  ++ +SN+YA  GM D  A++R+ M    + K  G S I+++
Sbjct: 1141 IAEQAADSLFNLEPQMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESVIQVN 1200

Query: 711  SKLHHFVASGKDHPESEEIYSKLDLLN----DEMKLKVKD 746
             K H F    + H E+E IYS L+ L+    DE ++  KD
Sbjct: 1201 GKNHTFTVGERGHMENEAIYSTLNGLSLFARDEKQILHKD 1240



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 224/481 (46%), Gaps = 27/481 (5%)

Query: 78   QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
            + VH  L+KS   +D F     ++++ K + LD A K+F+ M VR A TW +++ G+   
Sbjct: 668  EMVHTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQS 727

Query: 138  GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
            G  + V  +  +M   E   +  T   ++++ S  +     + +HAF I+ G +    V 
Sbjct: 728  GHTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVS 787

Query: 198  TSLISMYFHSGCFREAENVFRGLAYKDVRCV--NFMILEYNKAGESEMAFHVFVHLLSSD 255
             + IS Y   G    A+ VF  +   D   V  N +   +   GE+  AF  +  +L  +
Sbjct: 788  NTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDE 847

Query: 256  FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
            F+P+  TF N+ + C     + +G+ +H  A+  G  ++I   N  ++MY K G S  A 
Sbjct: 848  FKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSAR 907

Query: 316  RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
             +FD +  R  +SWT +ISGY   G   +A+  F      G+  D   L ++I GC    
Sbjct: 908  LLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFG 967

Query: 376  NLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
            +LE+G  + G A  +G   D V +  AL+D+Y+K G +  AR + D  S K    +  ++
Sbjct: 968  SLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMI 1027

Query: 435  SG------FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL-- 486
            +G      F+E         M LFS+      +P+ +TF  +L   A    L +G     
Sbjct: 1028 AGYALNGIFLE--------AMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFH 1079

Query: 487  ---HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYAL 542
                 Y+I  G    +   + ++ +  + G +D A ++   +S + D   W A+LSA  +
Sbjct: 1080 IMKQVYNISPG----LDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKI 1135

Query: 543  H 543
            H
Sbjct: 1136 H 1136



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 172/368 (46%), Gaps = 5/368 (1%)

Query: 74   LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV--RSAITWTSLI 131
            LKL + +HAF ++ G       +N  I+ Y K   LD A+ +F+ +    R+ ++W S+ 
Sbjct: 765  LKLLKVMHAFGIRLGVDLQATVSNTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVF 824

Query: 132  KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            K +   G+     G    M R E K +  T   +  +C   +    G  IH+ AI  G +
Sbjct: 825  KAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTD 884

Query: 192  NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
             ++    + ISMY  SG    A  +F  +  +       MI  Y + G+ + A  +F  +
Sbjct: 885  QDIEAINTFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAM 944

Query: 252  LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE-ISVGNAIVTMYGKHGM 310
              +   P+  T  ++IS C +   +E GK + G A  +G  ++ + V NA++ MY K G 
Sbjct: 945  AKTGVNPDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGS 1004

Query: 311  SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             +EA  +FD  SE+ +++WT +I+GY  +G   +A+  F + +DL    +      V+  
Sbjct: 1005 IDEARDIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQA 1064

Query: 371  CSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            C+   +LE G +  H     +     +   + +VD+  + G L  A  L+   S K  A 
Sbjct: 1065 CAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAG 1124

Query: 430  -FNAILSG 436
             + A+LS 
Sbjct: 1125 IWGALLSA 1132


>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
 gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
 gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
 gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
 gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 681

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 184/618 (29%), Positives = 306/618 (49%), Gaps = 38/618 (6%)

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
           H+ + +L AC  +   + G Q+HA  I SG E +  +   L++ Y       EA+++   
Sbjct: 44  HSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN 103

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
                    N +I  Y K    E     +  ++S    P+ +T+ +V+  C E L V  G
Sbjct: 104 SDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           + +HG          + V NA+++MY +      A R+FD + ER+ +SW A+I+ Y   
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223

Query: 340 GHGGKAINGFLEFLDLGI--------CCDSSCLATV------------------------ 367
           G   +A   F +    G+             CL T                         
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAM 283

Query: 368 ---IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
              +  CS+   + LG ++HG AI   Y     +   L+ +Y+K  DL+ A ++      
Sbjct: 284 IIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEE 343

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
                +N+I+SG+ +   +  E+   L  +  +AG +P+ +T + +L L A  A L  G+
Sbjct: 344 NSLCTWNSIISGYAQ--LNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401

Query: 485 SLHAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             H Y ++     D  ++ N+L+ +YAK G I  A Q+   +S RD V++ +++  Y   
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQ 461

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G G  AL LF+EM R G  PD ++++ VL AC +S L   G  LF +++  YG+RP L+H
Sbjct: 462 GEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH 521

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           F+CMVDL GRAG L++A ++I++ P+  S   W TL++   +  N++    A+++LL+++
Sbjct: 522 FSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMK 581

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P++ G ++L++NMYA  G   + A+VRT M DL + K+ GC+WI+ DS    F       
Sbjct: 582 PENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSS 641

Query: 724 PESEEIYSKLDLLNDEMK 741
           PE+   Y  LD LN  MK
Sbjct: 642 PEACNTYPLLDGLNQLMK 659



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 205/464 (44%), Gaps = 38/464 (8%)

Query: 8   NLLQPPFKSQQSLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKI 67
           N  Q   ++   L PL   V I +++ N   +         VS   R   F  +P ++K 
Sbjct: 95  NEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFT-YPSVLKA 153

Query: 68  SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
              + D+  G+ VH  +  S  ++  +  N LI++Y +F  + +A++LFD M  R A++W
Sbjct: 154 CGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSW 213

Query: 128 TSLIKGY-----------------------------------LDDGDYESVLGIACDMYR 152
            ++I  Y                                   L  G+Y   LG+   M  
Sbjct: 214 NAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRN 273

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
                +     + L+ACSL+     G++IH  AI S ++    V  +LI+MY      R 
Sbjct: 274 FPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRH 333

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VFR      +   N +I  Y +  +SE A H+   +L + F+PN  T  +++ +C  
Sbjct: 334 ALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCAR 393

Query: 273 NLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
              ++ GK+ H   ++    ++ + + N++V +Y K G    A+++ D +S+R+ +++T+
Sbjct: 394 IANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTS 453

Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH-GFAIKH 390
           LI GY   G GG A+  F E    GI  D   +  V+  CS    +  G +L      ++
Sbjct: 454 LIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEY 513

Query: 391 GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
           G    ++  + +VD+Y + G L  A+ ++     K +    A L
Sbjct: 514 GIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 222/524 (42%), Gaps = 43/524 (8%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VHA  + SG +  +     L+  Y+ FN  + AQ + +   +   + W  LI  Y  
Sbjct: 62  GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAK 121

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           +  +E V+     M     + +  T   +L+AC    D  FG  +H     S ++++++V
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYV 181

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
             +LISMY        A  +F  +  +D    N +I  Y   G    AF +F  +  S  
Sbjct: 182 CNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGV 241

Query: 257 EPNDYTFTNVISVCYEN------LG-----------------------------VEEGKQ 281
           E +  T+  +   C +       LG                             +  GK+
Sbjct: 242 EVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 301

Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
           +HGLA+        +V N ++TMY K      A  +F    E +L +W ++ISGY +   
Sbjct: 302 IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361

Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRLGT 400
             +A +   E L  G   +S  LA+++  C+  +NL+ G + H + ++     D   L  
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWN 421

Query: 401 ALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
           +LVD+YAK G + +A+ + D  S +    + +++ G+  +   +    + LF +   +G+
Sbjct: 422 SLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQ--GEGGVALALFKEMTRSGI 479

Query: 461 EPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           +PD VT   +LS  +    +  G R       + G    +   + ++ +Y + G +  A 
Sbjct: 480 KPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAK 539

Query: 520 QIFKGISDRDI-VSWNAMLSAYALHG---LGKGALLLFEEMKRE 559
            I   +  +    +W  +L+A  +HG   +GK A     EMK E
Sbjct: 540 DIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPE 583



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/483 (21%), Positives = 191/483 (39%), Gaps = 87/483 (18%)

Query: 244 AFHVF--VHLLSSDFEPND---YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
           AF  F  + L SS    +D   ++  +++S C +      G Q+H   +  GV     + 
Sbjct: 22  AFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLV 81

Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
             +VT Y    +  EA+ + +     + + W  LI+ Y ++    + I  +   +  GI 
Sbjct: 82  PKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIR 141

Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
            D+    +V+  C    ++  G  +HG      Y S + +  AL+ +Y +  ++  AR L
Sbjct: 142 PDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRL 201

Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTF----------- 467
            D    +    +NA+++ +  +    E     LF +   +G+E   +T+           
Sbjct: 202 FDRMFERDAVSWNAVINCYASEGMWSE--AFELFDKMWFSGVEVSVITWNIISGGCLQTG 259

Query: 468 ---------SRLLSLSAS----------QAC-----LVRGRSLHAYSIKTGYAADVIVGN 503
                    SR+ +   S          +AC     +  G+ +H  +I + Y     V N
Sbjct: 260 NYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRN 319

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAP 563
            LITMY+KC  +  A  +F+   +  + +WN+++S YA     + A  L  EM   GF P
Sbjct: 320 TLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP 379

Query: 564 DDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMN 622
           + I++  +L  C   + L  G                  + F C +              
Sbjct: 380 NSITLASILPLCARIANLQHG------------------KEFHCYI-------------- 407

Query: 623 LINSSPFSESPLLWRTLVSV----SKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
            +    F +  +LW +LV V     K++A  + S L SKR       D  ++  + + Y 
Sbjct: 408 -LRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR-------DEVTYTSLIDGYG 459

Query: 679 GQG 681
            QG
Sbjct: 460 NQG 462


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 179/585 (30%), Positives = 309/585 (52%), Gaps = 9/585 (1%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR--EAENVFR 218
           T + +L+ C+   D   G  +HA     G ++     T+L +MY  + C R  +A  VF 
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMY--AKCRRPADARRVFD 118

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE-PNDYTFTNVISVCYENLGVE 277
            +  +D    N ++  Y + G + MA  + V +   + E P+  T  +V+  C     + 
Sbjct: 119 RMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALA 178

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
             ++ H  A++ G+   ++V  AI+  Y K G    A  +FD +  +N +SW A+I GY 
Sbjct: 179 ACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYA 238

Query: 338 RSGHGGKAINGFLEFLDLGI-CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           ++G   +A+  F   ++ G+   D S LA  +  C     L+ G+++H   ++ G  S+V
Sbjct: 239 QNGDSREALALFNRMVEEGVDVTDVSVLAA-LQACGELGCLDEGMRVHELLVRIGLDSNV 297

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  AL+ +Y+K   +  A  + D    +    +NA++ G  +      ED + LF++ +
Sbjct: 298 SVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGC--SEDAVRLFTRMQ 355

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           L  ++PD  T   ++   A  +  ++ R +H YSI+     DV V  ALI MYAKCG ++
Sbjct: 356 LENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVN 415

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A  +F    +R +++WNAM+  Y  HG GK A+ LFEEMK  G  P++ + L VL AC 
Sbjct: 416 IARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
           ++GL + G   F  +++ YGL P +EH+  MVDLLGRAG+L EA   I   P      ++
Sbjct: 476 HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             ++   KL  N + +  +++++ +L P++    +L++N+YA   M  + A+VRT M   
Sbjct: 536 GAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKN 595

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            L K  G S I++ +++H F +   +H +++EIYS+L  L +E+K
Sbjct: 596 GLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIK 640



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 261/549 (47%), Gaps = 18/549 (3%)

Query: 41  AYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLI 100
           A L +  ++S +    +   +  L+K+    GDL  G+AVHA L   G  ++   A  L 
Sbjct: 42  AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNE 159
           N+YAK  R   A+++FD M VR  + W +L+ GY  +G     + +   M   E E+ + 
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
            T   +L AC+         + HAFAI+SG E  V V T+++  Y   G  R A  VF  
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +  K+    N MI  Y + G+S  A  +F  ++    +  D +    +  C E   ++EG
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
            ++H L V+ G+   +SV NA++TMY K    + A  +FD +  R  +SW A+I G  ++
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G    A+  F       +  DS  L +VI   +  S+      +HG++I+     DV + 
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           TAL+D+YAK G +  AR+L +    ++   +NA++ G+        +  + LF + +  G
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSH--GFGKAAVELFEEMKSIG 459

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDG 517
           + P+  TF  +LS + S A LV     +  S+K  Y  +  + +   ++ +  + G +D 
Sbjct: 460 IVPNETTFLSVLS-ACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518

Query: 518 AFQIFKGIS-DRDIVSWNAMLSAYALHG----LGKGALLLFEEMKREGFAPDDISILGVL 572
           A+   + +  D  +  + AML A  LH       + A  +FE   +EG       +  VL
Sbjct: 519 AWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEG-------VYHVL 571

Query: 573 QACIYSGLS 581
            A IY+  S
Sbjct: 572 LANIYANAS 580


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 168/582 (28%), Positives = 304/582 (52%), Gaps = 9/582 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
           +QIHA  +  G + + F+ T LI      G    A  VF  L    +   N +I  Y++ 
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              + A  ++ ++  +   P+ +TF +++  C     ++ G+ +H    + G   ++ V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 299 NAIVTMYGKHGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           N ++ +Y K      A  +F+ +   ER ++SWTA++S Y ++G   +A+  F +   + 
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D   L +V++  +   +L+ G  +H   +K G   +  L  +L  +YAK G + +A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           +L D         +NA++SG+ +       + + +F +     + PD ++ +  +S  A 
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKN--GYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L + RS++ Y  ++ Y  DV + +ALI M+AKCGS++GA  +F    DRD+V W+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +  Y LHG  + A+ L+  M+R G  P+D++ LG+L AC +SG+   G   FN +   + 
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 454

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P  +H+AC++DLLGRAG L +A  +I   P      +W  L+S  K   + +    A+
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           ++L  ++P + G ++ +SN+YA   + D  A+VR  M +  L+K+ GCSW+E+  +L  F
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 574

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK----LKVKDSSAFELQD 754
               K HP  EEI  +++ +   +K    +  KD+S  +L D
Sbjct: 575 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLND 616



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 248/518 (47%), Gaps = 34/518 (6%)

Query: 46  ISSVSCSERTLLFND--------WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEAN 97
           +S  SC    LL+ +        +  L+  +     LK    +HA LL  G Q   F   
Sbjct: 1   MSEASCLASPLLYTNSGIHSDSFYASLIDSATHKAQLK---QIHARLLVLGLQFSGFLIT 57

Query: 98  NLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF 157
            LI+  + F  +  A+++FD +       W ++I+GY  +  ++  L +  +M  +    
Sbjct: 58  KLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSP 117

Query: 158 NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVF 217
           +  T   +L+ACS L     G  +HA   + GF+ +VFV   LI++Y        A  VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177

Query: 218 RGLAYKDVRCVNF--MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVIS--VCYEN 273
            GL   +   V++  ++  Y + GE   A  +F  +   D +P+     +V++   C ++
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237

Query: 274 LGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALI 333
           L  ++G+ +H   VK G+  E  +  ++ TMY K G    A+ +FD +   NLI W A+I
Sbjct: 238 L--KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295

Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
           SGY ++G+  +AI+ F E ++  +  D+  + + I  C+   +LE    ++ +  +  Y 
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355

Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
            DV + +AL+D++AK G ++ AR++ D    +    ++A++ G+   +     + + L+ 
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY--GLHGRAREAISLYR 413

Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVR-------GRSLHAYSIKTGYAADVIVGNALI 506
                G+ P+ VTF  LL ++ + + +VR         + H  + +  + A V      I
Sbjct: 414 AMERGGVHPNDVTFLGLL-MACNHSGMVREGWWFFNRMADHKINPQQQHYACV------I 466

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
            +  + G +D A+++ K +  +  V+ W A+LSA   H
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 183/577 (31%), Positives = 300/577 (51%), Gaps = 12/577 (2%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G Q+H   +K GF ++  +G +LI MY   G  R A  VF G+  ++V     +++ + +
Sbjct: 23  GAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLR 82

Query: 238 AGESEMAFHVFVHLLS-SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
            G++     +   + S SD  PN++T +  +  C     +  G  +HG  V+ G      
Sbjct: 83  HGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHV 142

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL--- 353
           V N++V +Y K G   +A R+FD    RNL++W A+ISGY  +GHG  ++  F E     
Sbjct: 143 VANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRR 202

Query: 354 --DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY--LSDVRLGTALVDIYAKG 409
             +     D    A+++  C        G Q+H   +  G    S+  L  AL+D+Y K 
Sbjct: 203 QEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKC 262

Query: 410 GDL-KSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
             L   A  + +    K   ++  ++ G  ++     ++ M LF +   +G+  D    S
Sbjct: 263 RCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQE--GQVKEAMELFGRFWSSGVRADGHVLS 320

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
            ++ + A  A + +GR +H Y++KT    DV V N+LI MY KCG  D A + F+ +  R
Sbjct: 321 SVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPAR 380

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           ++VSW AM++    HG G+ A+ +FEEM+ EG  PD+++ L +L AC +SGL E     F
Sbjct: 381 NVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYF 440

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
           + I     LRP  EH+ACMVDLLGRAG LSEA +L+ + P + +  +W+TL+S  ++  N
Sbjct: 441 SAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKN 500

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
                 A + LL ++  +  +++++SN++A  G   E  +VR  M    L K+ GCSW+E
Sbjct: 501 VTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVE 560

Query: 709 IDSKLHHFVASGKD-HPESEEIYSKLDLLNDEMKLKV 744
           +  + H F   G D HP + +I   L  +   M+ ++
Sbjct: 561 VGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERL 597



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 210/429 (48%), Gaps = 14/429 (3%)

Query: 53  ERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVA 112
           ER  +  D   +++ S  S  +  G  +H  LLK G  +DT   NNLI++YAK   L +A
Sbjct: 2   ERRKMIAD---MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMA 58

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSL 171
            ++F GM  R+ ++WT+L+ G+L  GD    L +   M   S+   NE T S  L+AC +
Sbjct: 59  GEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGV 118

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
           + D   G  IH   +++GFE +  V  SL+ +Y   G   +A  VF G  ++++   N M
Sbjct: 119 VGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAM 178

Query: 232 ILEYNKAGESEMAFHVFVHLLS-----SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
           I  Y  AG    +  VF  +        D +P+++TF +++  C       EG Q+H   
Sbjct: 179 ISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAM 238

Query: 287 VKFGV--VREISVGNAIVTMYGK-HGMSEEAERMFDAISERNLISWTALISGYVRSGHGG 343
           V  GV       +  A++ MY K   +   A ++F+ + ++N I WT +I G+ + G   
Sbjct: 239 VIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVK 298

Query: 344 KAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALV 403
           +A+  F  F   G+  D   L++V+   +  + +E G Q+H + +K     DV +  +L+
Sbjct: 299 EAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLI 358

Query: 404 DIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPD 463
           D+Y K G    A         +    + A+++G  +      ++ + +F + R  G+EPD
Sbjct: 359 DMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKH--GHGQEAIHMFEEMRAEGVEPD 416

Query: 464 PVTFSRLLS 472
            V +  LLS
Sbjct: 417 EVAYLALLS 425



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 121/226 (53%), Gaps = 6/226 (2%)

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
           +A ++   +  S +  G QLHG  +K G+ SD  LG  L+D+YAK G+L+ A  +  G  
Sbjct: 7   IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
            +    + A++ GF+ +  D  E + +L + + L+ + P+  T S  L        +  G
Sbjct: 67  ERNVVSWTALMVGFL-RHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAG 125

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
             +H   ++ G+    +V N+L+ +Y+K G I  A ++F G   R++V+WNAM+S YA  
Sbjct: 126 VWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHA 185

Query: 544 GLGKGALLLFEEMKR-----EGFAPDDISILGVLQACIYSGLSEGG 584
           G G+ +LL+F EM++     E   PD+ +   +L+AC   G +  G
Sbjct: 186 GHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREG 231



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           +L  SA+ + +  G  LH   +K G+ +D ++GN LI MYAKCG +  A ++F G+ +R+
Sbjct: 10  MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKR-EGFAPDDISILGVLQAC-----IYSGLSEG 583
           +VSW A++  +  HG  +  L L   M+     AP++ ++   L+AC     + +G+   
Sbjct: 70  VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIH 129

Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVS 643
           G C+    E  + +   L      V L  + GR+ +A  + + + F  + + W  ++S  
Sbjct: 130 GACVRAGFEGHHVVANSL------VLLYSKGGRIGDARRVFDGTVF-RNLVTWNAMISGY 182

Query: 644 KLMANSKFSILA----SKRLLDLEPKDAGSFILVSNMYA--GQGMLDEAAKVRTTM 693
               + + S+L      +R  + E      F   S + A    G   E A+V   M
Sbjct: 183 AHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAM 238



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 50/97 (51%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           ++ G+ VH + +K+ +  D   AN+LI++Y K    D A + F  +  R+ ++WT++I G
Sbjct: 332 VEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMING 391

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
               G  +  + +  +M     + +E     +L ACS
Sbjct: 392 LGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACS 428


>gi|297816220|ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321831|gb|EFH52252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 731

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 200/678 (29%), Positives = 340/678 (50%), Gaps = 53/678 (7%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           D   G  VH + ++SG    +  +N L++LYA+   L   ++ F+ ++     +WT+L+ 
Sbjct: 66  DTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYARLGNLASLKRKFEEIIEPDVYSWTTLLS 125

Query: 133 GYLDDGDYESVL----------------------------GIACDMYRSEEKF----NEH 160
                GD E                               G + +++R   K     ++ 
Sbjct: 126 ASFKLGDIEYAFEVFDKMPERDDVAVWNAMITGCKESGYHGTSIELFREMHKLGVRHDKF 185

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR-- 218
             + +L  C       FG+Q+H+  IK+GF     V  +LI+MYF+     +A  VF   
Sbjct: 186 GFATVLSMC-YYGSLDFGKQVHSLVIKAGFFVASSVVNALITMYFNCQVVVDARLVFEEA 244

Query: 219 GLAYKDVRCVNFMILEYNKAG-ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY-ENLGV 276
            +A +D   V F ++    AG + E +  VF  ++ +   P D TF +V+S C  E +G 
Sbjct: 245 DVAVRDQ--VTFNVVIDGLAGFKREESLLVFRQMVEAGLRPTDLTFVSVMSSCSCETMG- 301

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
               Q+HGL++K G      V N+ +TMY        A ++F+++ E++LI+W  +ISGY
Sbjct: 302 ---HQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGY 358

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            ++  G  A+  +     +G+  D     +++        LE+   +    IK G  S +
Sbjct: 359 NQANLGQSALLLYKRMHGIGVKPDEFTFGSLLASSLDLDALEM---VQACVIKFGLSSKI 415

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE--EDVMVLFSQ 454
            +  AL+  Y+K G +  A ++ +    K    +NAI+SGF       E  E    L   
Sbjct: 416 EISNALISAYSKHGKITKADLIFESSPKKNLISWNAIISGFYHNGFSFEGLERFSCLLEA 475

Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
           + L  + PD  T S LLS+    + L+ G   HAY+++ G   + ++GNA I MY++CG+
Sbjct: 476 EVL--IIPDAYTLSILLSICVDISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGT 533

Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-FAPDDISILGVLQ 573
           +  +  +F  +SD+D VSWN+++SAYA HG G+ A+L ++ M+ EG   PD  ++  VL 
Sbjct: 534 LQKSLAVFHQMSDKDTVSWNSLISAYARHGKGESAVLTYKTMQDEGKVDPDAATLSAVLS 593

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNL--INSSPFSE 631
           AC ++GL + G+ +FN + + +GL P ++HF+C+VDLLGRAG L EA +L  I+      
Sbjct: 594 ACGHAGLVKEGLEIFNSMVEFHGLIPNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGS 653

Query: 632 SPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRT 691
              +W  L S      + K   + ++ L++ E  D   ++ +SN+YAG G+  EA + R 
Sbjct: 654 RVDVWWALFSACAAHGDLKLGKMVARLLMEKEKNDPSVYVQLSNIYAGAGLWKEAEETRK 713

Query: 692 TMNDLRLSKEAGCSWIEI 709
            +N +   K+ GCSW+ +
Sbjct: 714 AINMIGAMKQRGCSWMRL 731



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 250/501 (49%), Gaps = 22/501 (4%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD--GMLVRSAITWTS 129
           G L  G+ VH+ ++K+G    +   N LI +Y     +  A+ +F+   + VR  +T+  
Sbjct: 197 GSLDFGKQVHSLVIKAGFFVASSVVNALITMYFNCQVVVDARLVFEEADVAVRDQVTFNV 256

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G       ES+L +   M  +  +  + T   ++ +CS       G Q+H  +IK+G
Sbjct: 257 VIDGLAGFKREESLL-VFRQMVEAGLRPTDLTFVSVMSSCSC---ETMGHQVHGLSIKTG 312

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           +E    V  S ++MY     F  A  VF  L  KD+   N MI  YN+A   + A  ++ 
Sbjct: 313 YEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGYNQANLGQSALLLYK 372

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            +     +P+++TF ++++    +L ++  + +    +KFG+  +I + NA+++ Y KHG
Sbjct: 373 RMHGIGVKPDEFTFGSLLA---SSLDLDALEMVQACVIKFGLSSKIEISNALISAYSKHG 429

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL--DLGICCDSSCLATV 367
              +A+ +F++  ++NLISW A+ISG+  +G   + +  F   L  ++ I  D+  L+ +
Sbjct: 430 KITKADLIFESSPKKNLISWNAIISGFYHNGFSFEGLERFSCLLEAEVLIIPDAYTLSIL 489

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           +  C   S+L LG Q H +A++HG   +  +G A +++Y++ G L+ +  +    S K T
Sbjct: 490 LSICVDISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQKSLAVFHQMSDKDT 549

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +N+++S +       E  V+   + Q    ++PD  T S +LS       +  G  + 
Sbjct: 550 VSWNSLISAYARH-GKGESAVLTYKTMQDEGKVDPDAATLSAVLSACGHAGLVKEGLEIF 608

Query: 488 AYSIK-TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS----WNAMLSAYAL 542
              ++  G   +V   + L+ +  + G +D A  + K IS++ I S    W A+ SA A 
Sbjct: 609 NSMVEFHGLIPNVDHFSCLVDLLGRAGHLDEAESLVK-ISEKTIGSRVDVWWALFSACAA 667

Query: 543 HG---LGKG-ALLLFEEMKRE 559
           HG   LGK  A LL E+ K +
Sbjct: 668 HGDLKLGKMVARLLMEKEKND 688



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 139/606 (22%), Positives = 272/606 (44%), Gaps = 73/606 (12%)

Query: 138 GDYESVLGIACDMYRS-EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
           G+  + L +  D++R    + ++++ S+ + A   L D IFG Q+H +AI+SG   +  V
Sbjct: 29  GENRNALKLFADVHRCITLRPDQYSVSLAITAAGHLRDTIFGGQVHCYAIRSGLLCHSHV 88

Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD- 255
             +L+S+Y   G     +  F  +   DV     ++    K G+ E AF VF  +   D 
Sbjct: 89  SNTLLSLYARLGNLASLKRKFEEIIEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDD 148

Query: 256 -------------------------------FEPNDYTFTNVISVCYENLGVEEGKQLHG 284
                                             + + F  V+S+CY    ++ GKQ+H 
Sbjct: 149 VAVWNAMITGCKESGYHGTSIELFREMHKLGVRHDKFGFATVLSMCYYG-SLDFGKQVHS 207

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA--ISERNLISWTALI---SGYVRS 339
           L +K G     SV NA++TMY    +  +A  +F+   ++ R+ +++  +I   +G+ R 
Sbjct: 208 LVIKAGFFVASSVVNALITMYFNCQVVVDARLVFEEADVAVRDQVTFNVVIDGLAGFKRE 267

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
               +++  F + ++ G+        +V+  CS C    +G Q+HG +IK GY     + 
Sbjct: 268 ----ESLLVFRQMVEAGLRPTDLTFVSVMSSCS-CET--MGHQVHGLSIKTGYEEYTLVS 320

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
            + + +Y+   D  +A  + +    K    +N ++SG+ +  A+  +  ++L+ +    G
Sbjct: 321 NSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGYNQ--ANLGQSALLLYKRMHGIG 378

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
           ++PD  TF  LL+ S     L     + A  IK G ++ + + NALI+ Y+K G I  A 
Sbjct: 379 VKPDEFTFGSLLASSLDLDAL---EMVQACVIKFGLSSKIEISNALISAYSKHGKITKAD 435

Query: 520 QIFKGISDRDIVSWNAMLS-----AYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
            IF+    ++++SWNA++S      ++  GL + + LL  E+      PD  ++  +L  
Sbjct: 436 LIFESSPKKNLISWNAIISGFYHNGFSFEGLERFSCLLEAEVL---IIPDAYTLSILLSI 492

Query: 575 CIYSGLSEGGICLFNEIEQIYGLR--PILEHFA--CMVDLLGRAGRLSEAMNLINSSPFS 630
           C+     +    +  E    Y LR     E       +++  + G L +++ + +     
Sbjct: 493 CV-----DISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQKSLAVFHQMS-D 546

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLD---LEPKDAGSFILVSNMYAGQGMLDEAA 687
           +  + W +L+S        + ++L  K + D   ++P DA +   V +     G++ E  
Sbjct: 547 KDTVSWNSLISAYARHGKGESAVLTYKTMQDEGKVDP-DAATLSAVLSACGHAGLVKEGL 605

Query: 688 KVRTTM 693
           ++  +M
Sbjct: 606 EIFNSM 611



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 14/130 (10%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ I +    L LG+  HA+ L+ G   +T   N  IN+Y++   L  +  +F  M  + 
Sbjct: 489 LLSICVDISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQKSLAVFHQMSDKD 548

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH--TCSVILEACSLLEDRIFGEQI 181
            ++W SLI  Y   G  ES + +     + E K +    T S +L AC            
Sbjct: 549 TVSWNSLISAYARHGKGESAV-LTYKTMQDEGKVDPDAATLSAVLSACG----------- 596

Query: 182 HAFAIKSGFE 191
           HA  +K G E
Sbjct: 597 HAGLVKEGLE 606


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 179/585 (30%), Positives = 309/585 (52%), Gaps = 9/585 (1%)

Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR--EAENVFR 218
           T + +L+ C+   D   G  +HA     G ++     T+L +MY  + C R  +A  VF 
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMY--AKCRRPADARRVFD 118

Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE-PNDYTFTNVISVCYENLGVE 277
            +  +D    N ++  Y + G + MA  + V +   + E P+  T  +V+  C     + 
Sbjct: 119 RMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALA 178

Query: 278 EGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYV 337
             ++ H  A++ G+   ++V  AI+  Y K G    A  +FD +  +N +SW A+I GY 
Sbjct: 179 ACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYA 238

Query: 338 RSGHGGKAINGFLEFLDLGI-CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
           ++G   +A+  F   ++ G+   D S LA  +  C     L+ G+++H   ++ G  S+V
Sbjct: 239 QNGDSREALALFNRMVEEGVDVTDVSVLAA-LQACGELGCLDEGMRVHELLVRIGLDSNV 297

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
            +  AL+ +Y+K   +  A  + D    +    +NA++ G  +      ED + LF++ +
Sbjct: 298 SVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGC--SEDAVRLFTRMQ 355

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
           L  ++PD  T   ++   A  +  ++ R +H YSI+     DV V  ALI MYAKCG ++
Sbjct: 356 LENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVN 415

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A  +F    +R +++WNAM+  Y  HG GK A+ LFEEMK  G  P++ + L VL AC 
Sbjct: 416 IARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475

Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
           ++GL + G   F  +++ YGL P +EH+  MVDLLGRAG+L EA   I   P      ++
Sbjct: 476 HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535

Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
             ++   KL  N + +  +++++ +L P++    +L++N+YA   M  + A+VRT M   
Sbjct: 536 GAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKN 595

Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            L K  G S I++ +++H F +   +H +++EIYS+L  L +E+K
Sbjct: 596 GLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIK 640



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 261/549 (47%), Gaps = 18/549 (3%)

Query: 41  AYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLI 100
           A L +  ++S +    +   +  L+K+    GDL  G+AVHA L   G  ++   A  L 
Sbjct: 42  AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNE 159
           N+YAK  R   A+++FD M VR  + W +L+ GY  +G     + +   M   E E+ + 
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
            T   +L AC+         + HAFAI+SG E  V V T+++  Y   G  R A  VF  
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221

Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG 279
           +  K+    N MI  Y + G+S  A  +F  ++    +  D +    +  C E   ++EG
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
            ++H L V+ G+   +SV NA++TMY K    + A  +FD +  R  +SW A+I G  ++
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
           G    A+  F       +  DS  L +VI   +  S+      +HG++I+     DV + 
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           TAL+D+YAK G +  AR+L +    ++   +NA++ G+        +  + LF + +  G
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSH--GFGKAAVELFEEMKSIG 459

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDG 517
           + P+  TF  +LS + S A LV     +  S+K  Y  +  + +   ++ +  + G +D 
Sbjct: 460 IVPNETTFLSVLS-ACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518

Query: 518 AFQIFKGIS-DRDIVSWNAMLSAYALHG----LGKGALLLFEEMKREGFAPDDISILGVL 572
           A+   + +  D  +  + AML A  LH       + A  +FE   +EG       +  VL
Sbjct: 519 AWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEG-------VYHVL 571

Query: 573 QACIYSGLS 581
            A IY+  S
Sbjct: 572 LANIYANAS 580


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 285/490 (58%), Gaps = 3/490 (0%)

Query: 253 SSDFEPNDYTFTN-VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           + DF     +F + ++ +C +   + +GK  H   +  G+  ++   N ++ MY K G  
Sbjct: 56  TKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSV 115

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           + A ++FD +  R+L+SW  +I    ++G   +A++  L+    G       +++V+  C
Sbjct: 116 DFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCAC 175

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +    L     LH FAIK     +V + TAL+D+YAK G +K A  + +    +    ++
Sbjct: 176 AAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWS 235

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           ++ +G+++   +  E  + LF +    G++ D    S ++   A  A ++ G+ ++A   
Sbjct: 236 SMAAGYVQN--EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLS 293

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K+G+ +++ V ++LI MYAKCG I+ ++++F+ +  R++V WNAM+S  + H      ++
Sbjct: 294 KSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMI 353

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LFE+M++ G +P+D++ + VL AC + GL   G   F+ + + + L P + H++CMVD L
Sbjct: 354 LFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTL 413

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG++ EA +LI+  PF+ S  +W +L++  +   N + + +A+K+L D+EP ++G+++
Sbjct: 414 SRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYL 473

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+SNMYA  G  DE AK+R  + +  + KE G SWIEI  K+H F+   ++HP+  EIYS
Sbjct: 474 LLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYS 533

Query: 732 KLDLLNDEMK 741
           KL+ + DE++
Sbjct: 534 KLNEVMDELQ 543



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 174/354 (49%), Gaps = 1/354 (0%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           +++K+      L  G+A HA +L  G + D   +N LIN+Y+K   +D A+++FD M  R
Sbjct: 69  EILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR 128

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           S ++W ++I     +G+    L +   M R    F+E T S +L AC+        + +H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           AFAIK+  + NVFV T+L+ +Y   G  ++A  VF  +  + V   + M   Y +    E
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  +F     +  + + +  ++VI  C     + EGKQ++ L  K G    I V ++++
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLI 308

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G  EE+ ++F  + +RN++ W A+ISG  R     + +  F +   +G+  +  
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSA 415
              +V+  C     +  G +      K  +L+ +V   + +VD  ++ G +  A
Sbjct: 369 TFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEA 422



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 188/382 (49%), Gaps = 4/382 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           IL+ C+  +  + G+  HA  +  G + ++     LI+MY   G    A  VF  +  + 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +   N MI    + GE   A  + + +       +++T ++V+  C     + E + LH 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            A+K  +   + V  A++ +Y K G+ ++A  +F+++ +R++++W+++ +GYV++    +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+  F +  + G+  D   +++VI  C+  + +  G Q++    K G+ S++ + ++L+D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +YAK G ++ +  +      +    +NA++SG        E  VM+LF + +  G+ P+ 
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLE--VMILFEKMQQMGLSPND 367

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGY-AADVIVGNALITMYAKCGSIDGAFQIFK 523
           VTF  +LS       + +G+       K  + A +V   + ++   ++ G I  A+ +  
Sbjct: 368 VTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 524 GISDRDIVS-WNAMLSAYALHG 544
            +      S W ++L++   HG
Sbjct: 428 KLPFNASASMWGSLLASCRTHG 449


>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 726

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 196/655 (29%), Positives = 335/655 (51%), Gaps = 12/655 (1%)

Query: 73  DLKLGQAVHAFLLKSGSQNDT--FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           DL+  + +HA LL S   N++  F +  LI+ Y+KFN L+ A  +F  +   + ++W  +
Sbjct: 40  DLRTLKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLI 99

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC-SLLEDRIFGEQIHAFAIKSG 189
           ++ +LD G     L +   M  S  K +  T   I  A  SL  D + G+ +H  A+K G
Sbjct: 100 MRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLG 159

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           F  +++   ++I +Y   GC      +F  ++ +D+     MI  Y   G    AF +F 
Sbjct: 160 FGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELF- 218

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           + +  + EPN  T   ++  CY      EG+QLH   +K G++   SV N+I+ MY   G
Sbjct: 219 NKMRLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITG 278

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            ++E E +F  I  R++ISW  LI  Y   G   + + GF + +   +   S  L  VI 
Sbjct: 279 SAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQ-MRGEVALSSETLTLVIS 337

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
             +   NL  G +LH F+IK G   DV L + L+D YAK G+L+++  L     C+ ++ 
Sbjct: 338 VFAKIGNLVEGEKLHSFSIKVGLCDDVLLAS-LLDFYAKCGELRNSVQLFGEIPCRSSST 396

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +  ++SG ++    DE   + LF Q + +G++        L+   +    L   + +H Y
Sbjct: 397 WKLMMSGCIQNGYFDE--AIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGY 454

Query: 490 SIKTGY----AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGL 545
             +  +      ++ +G +++ MY +CGSI  A + F  +  +D ++W +M+  Y +HG+
Sbjct: 455 LTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGM 514

Query: 546 GKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFA 605
              AL LF +M  E   P+ ++ L +L AC +SGL   G  LF  ++ ++G+ P L+H+ 
Sbjct: 515 AIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYT 574

Query: 606 CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPK 665
           CMVDLLGR G++ EA+ +I          +W  LV+  ++  + K    A++RLL++E  
Sbjct: 575 CMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEMESD 634

Query: 666 DAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
           + G + L+SN+ A  G  DE  +VR  +++  L K  G S I    + + F++ G
Sbjct: 635 NVGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWSCIVGKGRNYCFISEG 689



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 17/288 (5%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G+L  G+ +H+F +K G  +D   A +L++ YAK   L  + +LF  +  RS+ TW  ++
Sbjct: 343 GNLVEGEKLHSFSIKVGLCDDVLLA-SLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMM 401

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G + +G ++  + +   M  S  +        +++ACS L      ++IH +  ++ F 
Sbjct: 402 SGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFY 461

Query: 192 ----NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
               +N+ +GTS+++MY   G    A   F  +  KD      MI  Y   G +  A  +
Sbjct: 462 ILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKL 521

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMY 305
           F  +L     PN  TF +++S C  +  + +G +L  L++K  FG+  ++     +V + 
Sbjct: 522 FNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELF-LSMKWVFGMEPDLDHYTCMVDLL 580

Query: 306 GKHGMSEEAE----RMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           G+ G  +EA     RM      R    W AL++      HG K +  F
Sbjct: 581 GRCGKIKEALAMIIRMVVVADSR---IWGALVASC--RVHGDKKVGEF 623


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 161/489 (32%), Positives = 279/489 (57%), Gaps = 12/489 (2%)

Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS 322
           +  +++ C     V EG+++H   +K   +  + +   ++ +Y K      A  +FD + 
Sbjct: 13  YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72

Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ 382
           ERN++SWTA+ISGY + G   +A++ F++ L      +    ATV+  C+  S  ELG Q
Sbjct: 73  ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132

Query: 383 LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIA 442
           +H    K  Y + + +G++L+D+YAK G +  AR + +    +      AI+SG+ +   
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192

Query: 443 DDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
           D+E   + LF + +  GM  + VT++ LL+  +  A L  G+ +H++ ++      V++ 
Sbjct: 193 DEE--ALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQ 250

Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-F 561
           N+LI MY+KCG+++ A +IF  +  R ++SWNAML  Y+ HG G   + LF+ M+ E   
Sbjct: 251 NSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKV 310

Query: 562 APDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI---LEHFACMVDLLGRAGRLS 618
            PD ++ L VL  C + GL + G+ +F+E+  + G   I   +EH+ C++DLLGRAGR+ 
Sbjct: 311 KPDSVTFLAVLSGCSHGGLEDKGLEMFDEM--MNGGDEIEAGIEHYGCVIDLLGRAGRVE 368

Query: 619 EAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYA 678
           EA  LI   PF  +  +W +L+   ++ +N+        RLL++EP++AG+++++SN+YA
Sbjct: 369 EAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYA 428

Query: 679 GQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLND 738
             G  ++   VR  M +  + KE G SWIE+D  +H F AS + HP  EE++ K+     
Sbjct: 429 SAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKV----R 484

Query: 739 EMKLKVKDS 747
           E+ +K K+S
Sbjct: 485 ELLVKFKES 493



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 182/376 (48%), Gaps = 7/376 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
           F+ +  L+   +    ++ GQ VHA ++K+      + +  LI LY K   L  A+ +FD
Sbjct: 10  FDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFD 69

Query: 118 GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
            M  R+ ++WT++I GY   G     L +   M RS+ + NE T + +L +C+       
Sbjct: 70  EMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFEL 129

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G QIH+   K  +EN++FVG+SL+ MY  +G   EA  VF  L  +DV     +I  Y +
Sbjct: 130 GRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQ 189

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G  E A  +F  L       N  T+ ++++       ++ GKQ+H   ++  +   + +
Sbjct: 190 LGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVL 249

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF-LEFLDLG 356
            N+++ MY K G    A ++F+ +  R +ISW A++ GY + G G + +  F L   +  
Sbjct: 250 QNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENK 309

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT----ALVDIYAKGGDL 412
           +  DS     V+ GCS     + GL++    +  G   ++  G      ++D+  + G +
Sbjct: 310 VKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGG--DEIEAGIEHYGCVIDLLGRAGRV 367

Query: 413 KSARMLLDGFSCKYTA 428
           + A  L+     + TA
Sbjct: 368 EEAFELIKKMPFEPTA 383



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 186/370 (50%), Gaps = 6/370 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+++HA  IK+ +   V++ T LI +Y    C   A +VF  +  ++V     MI  Y++
Sbjct: 29  GQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQ 88

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            G +  A H+FV +L SD EPN++TF  V+S C    G E G+Q+H    K      I V
Sbjct: 89  RGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFV 148

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G++++ MY K G   EA  +F+ + ER+++S TA+ISGY + G   +A+  F      G+
Sbjct: 149 GSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGM 208

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             +    A+++   S  + L+ G Q+H   ++      V L  +L+D+Y+K G+L  AR 
Sbjct: 209 SSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARK 268

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG-MEPDPVTFSRLLSLSAS 476
           + +    +    +NA+L G+ +     E  V+ LF   R    ++PD VTF  +LS  + 
Sbjct: 269 IFNNMPVRTVISWNAMLVGYSKHGKGIE--VVKLFKLMREENKVKPDSVTFLAVLSGCSH 326

Query: 477 QACLVRGRSLHAYSIKTG--YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-W 533
                +G  +    +  G    A +     +I +  + G ++ AF++ K +      + W
Sbjct: 327 GGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIW 386

Query: 534 NAMLSAYALH 543
            ++L A  +H
Sbjct: 387 GSLLGACRVH 396


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 286/490 (58%), Gaps = 3/490 (0%)

Query: 253 SSDFEPNDYTFTN-VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           + DF     +F + ++ +C +   + +GK  H   +  G+  ++   N ++ MY K G  
Sbjct: 56  TKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSV 115

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           + A ++FD +  R+L+SW  +I    ++G   +A++  L+    G       +++V+  C
Sbjct: 116 DFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCAC 175

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +    L     LH FAIK     +V + TAL+D+YAK G +K A  + +    +    ++
Sbjct: 176 AAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWS 235

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           ++ +G+++   +  E  + LF +    G++ D    S ++   A  A ++ G+ ++A   
Sbjct: 236 SMAAGYVQN--EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLS 293

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K+G+ +++ V ++LI MYAKCG I+ ++++F+ +  R++V WNAM+S  + H      ++
Sbjct: 294 KSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMI 353

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LFE+M++ G +P+D++ + VL AC + GL + G   F+ + + + L P + H++CMVD L
Sbjct: 354 LFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTL 413

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG++ EA +LI+  PF+ S  +W +L++  +   N + + +A+K+L D+EP ++G+++
Sbjct: 414 SRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYL 473

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           L+SNMYA  G  DE AK+R  + +  + KE G SWIEI  K+H F+   ++HP+  EIYS
Sbjct: 474 LLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYS 533

Query: 732 KLDLLNDEMK 741
           KL+ + DE++
Sbjct: 534 KLNEVMDELQ 543



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 175/354 (49%), Gaps = 1/354 (0%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR 122
           +++K+      L  G+A HA +L  G + D   +N LIN+Y+K   +D A+++FD M  R
Sbjct: 69  EILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR 128

Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
           S ++W ++I     +G+    L +   M R    F+E T S +L AC+        + +H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
           AFAIK+  + NVFV T+L+ +Y   G  ++A  VF  +  + V   + M   Y +    E
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
            A  +F     +  + + +  ++VI  C     + EGKQ++ L  K G    I V ++++
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLI 308

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSS 362
            MY K G  EE+ ++F  + +RN++ W A+ISG  R     + +  F +   +G+  +  
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 363 CLATVIDGCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSA 415
              +V+  C     ++ G +      K  +L+ +V   + +VD  ++ G +  A
Sbjct: 369 TFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEA 422



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 188/382 (49%), Gaps = 4/382 (1%)

Query: 165 ILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKD 224
           IL+ C+  +  + G+  HA  +  G + ++     LI+MY   G    A  VF  +  + 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 225 VRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHG 284
           +   N MI    + GE   A  + + +       +++T ++V+  C     + E + LH 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 285 LAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGK 344
            A+K  +   + V  A++ +Y K G+ ++A  +F+++ +R++++W+++ +GYV++    +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 345 AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVD 404
           A+  F +  + G+  D   +++VI  C+  + +  G Q++    K G+ S++ + ++L+D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309

Query: 405 IYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDP 464
           +YAK G ++ +  +      +    +NA++SG        E  VM+LF + +  G+ P+ 
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLE--VMILFEKMQQMGLSPND 367

Query: 465 VTFSRLLSLSASQACLVRGRSLHAYSIKTGY-AADVIVGNALITMYAKCGSIDGAFQIFK 523
           VTF  +LS       + +G+       K  + A +V   + ++   ++ G I  A+ +  
Sbjct: 368 VTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 524 GISDRDIVS-WNAMLSAYALHG 544
            +      S W ++L++   HG
Sbjct: 428 KLPFNASASMWGSLLASCRTHG 449


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 170/582 (29%), Positives = 302/582 (51%), Gaps = 9/582 (1%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
            QIHA  +  G + + F+ T LI      G    A  VF  L    V   N +I  Y++ 
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
              + A  ++  +  +   P+ +TF +++  C     ++ G+ +H    + G   ++ V 
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 299 NAIVTMYGKHGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           N ++ +Y K      A  +F+ +   ER ++SWTA++S Y ++G   +A+  F +   + 
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D   L +V++  +   +LE G  +H   +K G  ++  L  +L  +YAK G + +A+
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
           +L D         +NA++SG+ +      +D + LF +     + PD ++ +  +S  A 
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKN--GFAKDAIDLFHEMINKDVRPDTISITSAISACAQ 335

Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
              L + R +  Y  ++ Y  DV + +ALI M+AKCGS++ A  +F    DRD+V W+AM
Sbjct: 336 VGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAM 395

Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
           +  Y LHG  + A+ L+  M+R+G  P+D++ LG+L AC +SG+   G   FN +   + 
Sbjct: 396 IVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HK 454

Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
           + P  +H+AC++DLLGRAG L +A  +I   P      +W  L+S  K   + +    A+
Sbjct: 455 INPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAA 514

Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
           ++L  ++P + G ++ +SN+YA   + D  A+VR  M +  L+K+ GCSW+E+  +L  F
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGF 574

Query: 717 VASGKDHPESEEIYSKLDLLNDEMK----LKVKDSSAFELQD 754
               K HP  EEI  +++ +   +K    +  KD+S  +L D
Sbjct: 575 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLND 616



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 233/487 (47%), Gaps = 26/487 (5%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +HA LL  G Q   F    LI+  + +  +  A+++FD +       W ++I+GY  +
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
             ++  L +   M  +    +  T   +L+AC  L     G  +HA   + GFE +VFV 
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNF--MILEYNKAGESEMAFHVFVHLLSSD 255
             LI++Y        A  VF GL   +   V++  ++  Y + GE   A  +F  +   D
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 256 FEPNDYTFTNVIS--VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
            +P+     +V++   C ++L  E+G+ +H   +K G+  E  +  ++ TMY K G    
Sbjct: 218 VKPDCVALVSVLNAFTCLQDL--EQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVAT 275

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A+ +FD +   NLI W A+ISGY ++G    AI+ F E ++  +  D+  + + I  C+ 
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQ 335

Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
             +LE    +  +  +  Y  DV + +AL+D++AK G ++ AR + D    +    ++A+
Sbjct: 336 VGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAM 395

Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR-------GRSL 486
           + G+   +     + + L+      G+ P+ VTF  LL ++ + + +VR         + 
Sbjct: 396 IVGY--GLHGQAREAISLYRAMERDGVHPNDVTFLGLL-IACNHSGMVREGWWFFNRMAD 452

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG- 544
           H  + +  + A       +I +  + G +D A+++ K +  +  V+ W A+LSA   H  
Sbjct: 453 HKINPQQQHYA------CIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506

Query: 545 --LGKGA 549
             LGK A
Sbjct: 507 VELGKYA 513



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 168/356 (47%), Gaps = 2/356 (0%)

Query: 62  PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
           P L+K   G   L++G+ VHA + + G + D F  N LI LYAK  RL  A+ +F+G+ +
Sbjct: 123 PHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPL 182

Query: 122 --RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
             R+ ++WT+++  Y  +G+    L I   M + + K +      +L A + L+D   G 
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGR 242

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            IHA  +K G E    +  SL +MY   G    A+ +F  +   ++   N MI  Y K G
Sbjct: 243 SIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
            ++ A  +F  +++ D  P+  + T+ IS C +   +E+ + +     +     ++ + +
Sbjct: 303 FAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISS 362

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A++ M+ K G  E A  +FD   +R+++ W+A+I GY   G   +AI+ +      G+  
Sbjct: 363 ALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHP 422

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           +      ++  C+    +  G         H      +    ++D+  + G L  A
Sbjct: 423 NDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQA 478



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 124/270 (45%), Gaps = 1/270 (0%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL+ G+++HA ++K G + +     +L  +YAK  ++  A+ LFD M   + I W ++I 
Sbjct: 237 DLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296

Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFEN 192
           GY  +G  +  + +  +M   + + +  + +  + AC+ +        +  +  +S + +
Sbjct: 297 GYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRD 356

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
           +VF+ ++LI M+   G    A +VF     +DV   + MI+ Y   G++  A  ++  + 
Sbjct: 357 DVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAME 416

Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
                PND TF  ++  C  +  V EG           +  +      I+ + G+ G  +
Sbjct: 417 RDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLD 476

Query: 313 EAERMFDAIS-ERNLISWTALISGYVRSGH 341
           +A  +   +  +  +  W AL+S   +  H
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKHRH 506



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 12/240 (5%)

Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
           ++ L+  S  +A L   R +HA  +  G      +   LI   +  G I  A Q+F  + 
Sbjct: 24  YASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLP 80

Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
              +  WNA++  Y+ +   + ALL++ +M+    +PD  +   +L+AC   GLS   + 
Sbjct: 81  RPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKAC--GGLSHLQMG 138

Query: 587 LFNEIEQIYGLRPILEHFA--CMVDLLGRAGRLSEAMNLINSSPFSESPLL-WRTLVSVS 643
            F    Q++ L    + F    ++ L  +  RL  A  +    P  E  ++ W  +VS  
Sbjct: 139 RFVH-AQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAY 197

Query: 644 KLMAN--SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
                      I +  R +D++P D  + + V N +     L++   +  ++  + L  E
Sbjct: 198 AQNGEPVEALEIFSQMRKMDVKP-DCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETE 256


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 163/541 (30%), Positives = 294/541 (54%), Gaps = 10/541 (1%)

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           R+A  +F G+  ++V     ++  Y    +  +   VFV +L     P+ YT    ++ C
Sbjct: 90  RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 149

Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWT 330
             +  V+ GKQ+HG A+K+G     S+GN++ ++Y K G  + A R F  I E+N+I+WT
Sbjct: 150 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 209

Query: 331 ALISGYVRSGHGGK-AINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
            +IS         +  ++ F++ L  G+  +   L +V+  C    +L LG Q+  F+ K
Sbjct: 210 TMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 269

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF---MEKIADDEE 446
            G  +++ +  + + +Y + G+   A  L +         +NA++SG+   M+   DD +
Sbjct: 270 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 329

Query: 447 ------DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
                   + +F   + + M+PD  TFS +LS+ ++   L +G  +HA +IK+G+ +DV+
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           V +AL+ MY KCG I  A + F  +  R  V+W +M+S Y+ HG  + A+ LFEEM+  G
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 449

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             P++I+ + +L AC Y+GL E     F+ +++ Y + P+++H+ CM+D+  R GR+ +A
Sbjct: 450 VRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 509

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
            + I  + F  +  +W +LV+  +   N + +  A+ +LL+L+PK   ++IL+ NMY   
Sbjct: 510 FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYIST 569

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
               + A+VR  M    +      SWI I  K++ F A+ + HP++ E+Y  L+ L ++ 
Sbjct: 570 ERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKA 629

Query: 741 K 741
           K
Sbjct: 630 K 630



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 224/449 (49%), Gaps = 20/449 (4%)

Query: 112 AQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSL 171
           A++LFDGM  R+ +TWT+L+ GY  +      L +  +M       + +T    L AC  
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151

Query: 172 LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFM 231
             D   G+Q+H +AIK G E+   +G SL S+Y   G    A   F  +  K+V     M
Sbjct: 152 SCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTM 211

Query: 232 ILEYNKAGES-EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
           I    +  E  E+   +F+ +L     PN++T T+V+S+C   L +  GKQ+   + K G
Sbjct: 212 ISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIG 271

Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR-----------S 339
               + V N+ + +Y + G ++EA R+F+ + + ++I+W A+ISGY +            
Sbjct: 272 CETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQAR 331

Query: 340 GHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG 399
             G +A+  F +     +  D    ++++  CS    LE G Q+H   IK G+LSDV + 
Sbjct: 332 SRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN 391

Query: 400 TALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           +ALV++Y K G ++ A         +    + +++SG+ +      ++ + LF + RLAG
Sbjct: 392 SALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQH--GQPQEAIQLFEEMRLAG 449

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDG 517
           + P+ +TF  LLS + S A LV     +   +K  Y  + +V +   +I M+ + G ++ 
Sbjct: 450 VRPNEITFVSLLS-ACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVED 508

Query: 518 AFQIFK--GISDRDIVSWNAMLSAYALHG 544
           AF   K  G    + + W+++++    HG
Sbjct: 509 AFSFIKRTGFEPNEAI-WSSLVAGCRSHG 536



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 161/316 (50%), Gaps = 12/316 (3%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           + S D+ LG+ VH + +K G+++ T   N+L +LYAK   LD A + F  +  ++ ITWT
Sbjct: 150 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 209

Query: 129 SLIKGYLDDGD-YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
           ++I    +D +  E  + +  DM       NE T + ++  C    D   G+Q+ AF+ K
Sbjct: 210 TMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 269

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE----- 242
            G E N+ V  S + +Y   G   EA  +F  +    +   N MI  Y +  +S      
Sbjct: 270 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 329

Query: 243 ------MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
                  A  +F  L  S  +P+ +TF++++SVC   + +E+G+Q+H   +K G + ++ 
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V +A+V MY K G  ++A + F  +  R  ++WT++ISGY + G   +AI  F E    G
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 449

Query: 357 ICCDSSCLATVIDGCS 372
           +  +     +++  CS
Sbjct: 450 VRPNEITFVSLLSACS 465



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 146/282 (51%), Gaps = 18/282 (6%)

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
           H  + +A R+FD + ERN+++WTAL++GY  +      +  F+E L++G       L   
Sbjct: 86  HRAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGAT 145

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           ++ C    +++LG Q+HG+AIK+G  S   +G +L  +YAK G L SA         K  
Sbjct: 146 LNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNV 205

Query: 428 AEFNAILSGFMEKIADDEEDV---MVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
             +  ++S      A+DEE V   M LF    + G+ P+  T + ++SL  ++  L  G+
Sbjct: 206 ITWTTMISA----CAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGK 261

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA--- 541
            + A+S K G   ++ V N+ + +Y + G  D A ++F+ + D  I++WNAM+S YA   
Sbjct: 262 QVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIM 321

Query: 542 ------LHGLGKG--ALLLFEEMKREGFAPDDISILGVLQAC 575
                 L    +G  AL +F ++KR    PD  +   +L  C
Sbjct: 322 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVC 363



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 13/276 (4%)

Query: 73  DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           DL LG+ V AF  K G + +    N+ + LY +    D A +LF+ M   S ITW ++I 
Sbjct: 256 DLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMIS 315

Query: 133 GYL-------DDGDYES----VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           GY        DD    S     L I  D+ RS  K +  T S IL  CS +     GEQI
Sbjct: 316 GYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI 375

Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
           HA  IKSGF ++V V ++L++MY   GC ++A   F  +  +       MI  Y++ G+ 
Sbjct: 376 HAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQP 435

Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK-FGVVREISVGNA 300
           + A  +F  +  +   PN+ TF +++S C     VEE +    +  K + +   +     
Sbjct: 436 QEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGC 495

Query: 301 IVTMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
           ++ M+ + G  E+A         E N   W++L++G
Sbjct: 496 MIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAG 531


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 188/656 (28%), Positives = 316/656 (48%), Gaps = 77/656 (11%)

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
           GD E+ + + C   +SE      T   +L+ C+ L+    G+++H+    +    +  +G
Sbjct: 80  GDLENAMELICMCQKSE--LETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALG 137

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE----------------- 240
             L+S Y   G  +E   VF  +  K+V   NFM+ EY K G+                 
Sbjct: 138 LKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE 197

Query: 241 ---SEMAFHVFVHLLSSD----------FEPN------------------DYTFTNVISV 269
               E AF +F  L   D          +  N                  D     +ISV
Sbjct: 198 GKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISV 257

Query: 270 ---CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
              C  +  +  GK +H LA+K    R I+  N ++ MY K G  + A R+F+ + ERN+
Sbjct: 258 LVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317

Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
           +SWT++I+GY R G    AI    +    G+  D   + +++  C+   +L+ G  +H +
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 377

Query: 387 AIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEE 446
              +   S++ +  AL+D+YAK G +++A  +      K    +N ++            
Sbjct: 378 IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------------ 425

Query: 447 DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALI 506
                        ++PD  T + +L   AS + L RG+ +H Y ++ GY++D  V NAL+
Sbjct: 426 -----------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474

Query: 507 TMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDI 566
            +Y KCG +  A  +F  I  +D+VSW  M++ Y +HG G  A+  F EM+  G  PD++
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINS 626
           S + +L AC +SGL E G   F  ++  + + P LEH+ACMVDLL R G LS+A   + +
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMET 594

Query: 627 SPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEA 686
            P +    +W  L+   +   + + +   ++R+ +LEP++ G ++L++N+YA     +E 
Sbjct: 595 LPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEV 654

Query: 687 AKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA-SGKDHPESEEIYSKLDLLNDEMK 741
            ++R  +    L K  GCSWIEI  K++ FV+ +   HP S+ I S L  +  +MK
Sbjct: 655 KRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 27/361 (7%)

Query: 60  DWPQLVKISIG---SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           D   ++ + +G   SG L LG+AVH+  +KS  +     +N L+++Y+K   LD A ++F
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVF 309

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           + M  R+ ++WTS+I GY  DG  +  + +   M +   K +    + IL AC+      
Sbjct: 310 EKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLD 369

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+ +H +   +  E+N+FV  +L+ MY   G    A +VF  +  KD+   N MI E  
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE-- 427

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
                               +P+  T   V+  C     +E GK++HG  ++ G   +  
Sbjct: 428 -------------------LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRH 468

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V NA+V +Y K G+   A  +FD I  ++L+SWT +I+GY   G+G +AI  F E  D G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKS 414
           I  D     +++  CS    LE G +   + +K+ +  + +L     +VD+ ++ G+L  
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587

Query: 415 A 415
           A
Sbjct: 588 A 588



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 221/498 (44%), Gaps = 51/498 (10%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKF---------------- 106
           +LV      GDLK G+ V      +  + + +  N +++ YAK                 
Sbjct: 139 KLVSFYATCGDLKEGRRV----FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEK 194

Query: 107 ----NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC 162
                R + A +LFD +  R  I+W S+I GY+ +G  E  LGI   M       +  T 
Sbjct: 195 GIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATI 254

Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
             +L  C+       G+ +H+ AIKS FE  +    +L+ MY   G    A  VF  +  
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE 314

Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
           ++V     MI  Y + G S+ A  +   +     + +    T+++  C  +  ++ GK +
Sbjct: 315 RNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV 374

Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
           H       +   + V NA++ MY K G  E A  +F  +  +++ISW  +I G ++    
Sbjct: 375 HDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-GELKP--- 430

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
                            DS  +A V+  C+  S LE G ++HG+ +++GY SD  +  AL
Sbjct: 431 -----------------DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANAL 473

Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
           VD+Y K G L  AR+L D    K    +  +++G+      +E   +  F++ R AG+EP
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNE--AIATFNEMRDAGIEP 531

Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQ 520
           D V+F  +L   +    L +G     Y +K  +  +  + +   ++ + ++ G++  A++
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590

Query: 521 IFKGIS-DRDIVSWNAML 537
             + +    D   W A+L
Sbjct: 591 FMETLPIAPDATIWGALL 608



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 226/549 (41%), Gaps = 107/549 (19%)

Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
           N  IL + + G+ E A  +      S+ E    T+ +V+ +C       +GK++H +   
Sbjct: 70  NAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKKVHSIIKS 127

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN----------------------- 325
             V  + ++G  +V+ Y   G  +E  R+FD + ++N                       
Sbjct: 128 NSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICL 187

Query: 326 ----------------------------LISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
                                       +ISW ++ISGYV +G   + +  + + + LGI
Sbjct: 188 FKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGI 247

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
             D + + +V+ GC+    L LG  +H  AIK  +   +     L+D+Y+K GDL  A  
Sbjct: 248 DVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALR 307

Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
           + +    +    + ++++G+      D    + L  Q    G++ D V  + +L   A  
Sbjct: 308 VFEKMGERNVVSWTSMIAGYTRDGRSD--GAIKLLQQMEKEGVKLDVVAITSILHACARS 365

Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
             L  G+ +H Y       +++ V NAL+ MYAKCGS++ A  +F  +  +DI+SWN M+
Sbjct: 366 GSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI 425

Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGGICLFNEIEQIYG 596
                            E+K     PD  ++  VL AC   S L  G        ++I+G
Sbjct: 426 G----------------ELK-----PDSRTMACVLPACASLSALERG--------KEIHG 456

Query: 597 --LRPIL---EHFA-CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL--MAN 648
             LR       H A  +VDL  + G L  A  L +  P S+  + W  +++   +    N
Sbjct: 457 YILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGYGN 515

Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM-NDLRLSKEAGCSWI 707
              +     R   +EP D  SFI +    +  G+L++  +    M ND            
Sbjct: 516 EAIATFNEMRDAGIEP-DEVSFISILYACSHSGLLEQGWRFFYIMKNDF----------- 563

Query: 708 EIDSKLHHF 716
            I+ KL H+
Sbjct: 564 NIEPKLEHY 572



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 78/204 (38%), Gaps = 55/204 (26%)

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
             ++NA +  F +    D E+ M L    + + +E    T+  +L L A       G+ +
Sbjct: 66  VTDYNAKILHFCQ--LGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKKV 121

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSI------------------------------- 515
           H+         D  +G  L++ YA CG +                               
Sbjct: 122 HSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDF 181

Query: 516 --------------------DGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEE 555
                               + AF++F  + DRD++SWN+M+S Y  +GL +  L ++++
Sbjct: 182 KESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQ 241

Query: 556 MKREGFAPDDISILGVLQACIYSG 579
           M   G   D  +I+ VL  C  SG
Sbjct: 242 MMYLGIDVDLATIISVLVGCANSG 265


>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
 gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 182/549 (33%), Positives = 293/549 (53%), Gaps = 6/549 (1%)

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS- 254
           + T L+  YF  G   +A N+F  +  +DV     MI  Y    E   A+ VFV ++ + 
Sbjct: 46  LATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNG 105

Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE-ISVGNAIVTMYGKHGMS-E 312
           +  PN +T ++V+  C     V  G+ +HGLA+K   +   I V NA++ MY   G+   
Sbjct: 106 NDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMR 165

Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
           +A  +F  I E+N++SWT LI+GY   G+G +A+  F E L  G+  +   ++  +  C+
Sbjct: 166 DACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACA 225

Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
              +   G Q+H   IKHG+ SD+ +  +++D+Y + G L  A    +  + K    +N 
Sbjct: 226 SIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNT 285

Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
           +++G+      D  +   +FSQ    G  P+  TF+ L++  A+ A L  G+ +H    +
Sbjct: 286 LIAGYERS---DSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFR 342

Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
            G   ++ + NALI MYAKCG+I  + + F  +S  ++VSW +M+  Y  HG GK A+ L
Sbjct: 343 RGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVEL 402

Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
           F+EM R G  PD +  + VL AC ++GL + G+   N +   Y ++P  E + C+VDLLG
Sbjct: 403 FDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLG 462

Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
           R GR+ +A  LI S PF     +W  L+   K    S+   LA+K+ L L P    ++++
Sbjct: 463 RPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVETYVM 522

Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
           +SN+YA +G   EAA++R  M      K AG SWIE+ ++++ FV   K     E +Y  
Sbjct: 523 LSNIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWIEVRNQVYSFVVGNKMGSHKEWVYEV 582

Query: 733 LDLLNDEMK 741
           L+L    MK
Sbjct: 583 LELPVQHMK 591



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 213/466 (45%), Gaps = 26/466 (5%)

Query: 96  ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS-E 154
           A +L+  Y +      A+ LFD M  R  + WT++I GY    +Y     +  DM ++  
Sbjct: 47  ATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGN 106

Query: 155 EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGTSLISMYFHSGC-FRE 212
           +  N  T S +L+AC  ++    G  +H  AIK  F E  ++V  +L+ MY   G   R+
Sbjct: 107 DPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRD 166

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           A  VF  +  K+V     +I  Y   G    A  +F  +L      N ++ +  +  C  
Sbjct: 167 ACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACAS 226

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
                 G+Q+H   +K G   ++ V N+I+ MY + G   EA + F+ ++E++LI+W  L
Sbjct: 227 IGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTL 286

Query: 333 ISGYVRSGHGGKAINGFLEFLDL---GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK 389
           I+GY RS     +I  F  F  +   G   +     +++  C+  + L+ G Q+HG   +
Sbjct: 287 IAGYERS----DSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFR 342

Query: 390 HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
            G   ++ L  AL+D+YAK G++  ++      SC     + +++ G+       E   +
Sbjct: 343 RGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKE--AV 400

Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS-----LHAYSIKTGYAADVIVGNA 504
            LF +   +G+ PD V F  +L   +    + +G       ++ Y IK        +   
Sbjct: 401 ELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQE----IYGC 456

Query: 505 LITMYAKCGSIDGAFQIFKG---ISDRDIVSWNAMLSAYALHGLGK 547
           ++ +  + G ++ A+Q+ +    ++D  +  W A+L A   H   +
Sbjct: 457 VVDLLGRPGRVEDAYQLIRSMPFMADESV--WGALLGACKAHNFSR 500



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 198/411 (48%), Gaps = 22/411 (5%)

Query: 30  NTFSPNP-KSQVAYLCSISSVS-CSERTLLF----------NDWPQLVKIS------IGS 71
           N F   P +  VA+   IS  + C+E T  +          ND P    IS       G 
Sbjct: 65  NLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGNDPPNAFTISSVLKACKGM 124

Query: 72  GDLKLGQAVHAFLLKSG-SQNDTFEANNLINLYAKFN-RLDVAQKLFDGMLVRSAITWTS 129
             +  G+ VH   +K    +   +  N L+++YA     +  A  +F  +  ++ ++WT+
Sbjct: 125 KRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDACVVFHDIKEKNVVSWTT 184

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           LI GY   G+    L I  +M       N H+ S+ + AC+ +  + FG QIH   IK G
Sbjct: 185 LIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACASIGSQNFGRQIHTAVIKHG 244

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
           FE+++ V  S++ MY   GC  EA   F  +  KD+   N +I  Y ++   E  F +F 
Sbjct: 245 FESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGYERSDSIE-PFFIFS 303

Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
            + S  F PN +TFT++++ C     ++ G+Q+HG   + G+   + + NA++ MY K G
Sbjct: 304 QMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCG 363

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
              ++++ F  +S  NL+SWT+++ GY   G+G +A+  F E +  GI  D      V+ 
Sbjct: 364 NIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLH 423

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLL 419
            CS    ++ GL+     I   ++  +  +   +VD+  + G ++ A  L+
Sbjct: 424 ACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLI 474


>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 200/648 (30%), Positives = 326/648 (50%), Gaps = 90/648 (13%)

Query: 97  NNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
           N +I   +K  R+  A++LFD M     ITWT++I GY+                     
Sbjct: 56  NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYI--------------------- 94

Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
                C +I EA  L  DR+  ++            NV   T+++  Y  S    +AE +
Sbjct: 95  ----KCGMIEEARRLF-DRVDAKK------------NVVTWTAMVGGYIRSNKISDAEKL 137

Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
           F  +  K+V   N MI  Y + G  + A ++F  +     E N  ++  V+S+  +   +
Sbjct: 138 FNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMP----ERNVVSWNTVMSMLAQCGRI 193

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
           EE ++L     +    R++    A++    K+G  +EA  +FD + ERN++SW A+I+GY
Sbjct: 194 EEARRLFDRMPE----RDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGY 249

Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
            ++    +A++ F    +     D     T+I G                          
Sbjct: 250 AQNLRLDEALDLFERMPER----DLPSWNTMITGL------------------------- 280

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ- 455
                      + GDL+ AR L +    K    +  +++G +++   + E+ + +FS+  
Sbjct: 281 ----------IQNGDLRRARKLFNEMPKKNVISWTTMITGCVQE--GESEEALKIFSRML 328

Query: 456 RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSI 515
              G +P+  TF  +L   ++ A L  G+ +H    KT Y     V +ALI MY+KCG +
Sbjct: 329 STNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGEL 388

Query: 516 DGAFQIFKG--ISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
             A ++F     S RD+VSWN +++AYA HG GK A+  F+EM++ GF PDD++ +G+L 
Sbjct: 389 GTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLS 448

Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
           AC ++GL E G+  F+E+ +   +    +H+AC+VDL GRAGRL EA   I       S 
Sbjct: 449 ACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSA 508

Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
            +W  L++   + AN K    A+K+LL++EP++AG+++L+SN+YA  G   EAA+VR  M
Sbjct: 509 RVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKM 568

Query: 694 NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
            D  L K+ GCSWIE+ +++H FV   K H +S+ IYS L  L+ +MK
Sbjct: 569 KDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMK 616



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 183/400 (45%), Gaps = 17/400 (4%)

Query: 46  ISSVSCSERTLLFNDWPQLVKISIGS---GDLKLGQAVHA-FLLKSGSQNDTFEANNLIN 101
           I S   S+   LFN+ P    +S  +   G  + G+   A +L +   + +    N +++
Sbjct: 126 IRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMS 185

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           + A+  R++ A++LFD M  R  I+WT++I G   +G  +    +   M   E       
Sbjct: 186 MLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRM--PERNVVSWN 243

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
             +   A +L  D    E +  F  +   E ++    ++I+    +G  R A  +F  + 
Sbjct: 244 AMITGYAQNLRLD----EALDLF--ERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMP 297

Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGK 280
            K+V     MI    + GESE A  +F  +LS++  +PN  TF +V+  C    G+ EG+
Sbjct: 298 KKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQ 357

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD--AISERNLISWTALISGYVR 338
           Q+H +  K        V +A++ MY K G    A +MFD    S+R+L+SW  +I+ Y  
Sbjct: 358 QVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAH 417

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK-HGYLSDVR 397
            G+G +AIN F E    G   D      ++  CS    +E GL+     +K    L    
Sbjct: 418 HGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVRED 477

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAILSG 436
               LVD+  + G LK A   ++    K +A  + A+L+G
Sbjct: 478 HYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAG 517



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 139/323 (43%), Gaps = 45/323 (13%)

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
           F V   ++  N ++T   K G   EA R+FD + E ++I+WT +ISGY++ G   +A   
Sbjct: 46  FTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRL 105

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD------------V 396
           F                   D      N+     + G  I+   +SD            V
Sbjct: 106 F-------------------DRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNV 146

Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
                ++D YA+ G + SA  L +    +    +N ++S   +      E+   LF +  
Sbjct: 147 VSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQ--CGRIEEARRLFDRM- 203

Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
               E D ++++ +++  +    +   R L     +     +V+  NA+IT YA+   +D
Sbjct: 204 ---PERDVISWTAMIAGLSKNGRIDEARLLFDRMPER----NVVSWNAMITGYAQNLRLD 256

Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
            A  +F+ + +RD+ SWN M++    +G  + A  LF EM ++      IS   ++  C+
Sbjct: 257 EALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNV----ISWTTMITGCV 312

Query: 577 YSGLSEGGICLFNEIEQIYGLRP 599
             G SE  + +F+ +    G +P
Sbjct: 313 QEGESEEALKIFSRMLSTNGAKP 335


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 169/561 (30%), Positives = 297/561 (52%), Gaps = 4/561 (0%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G+ IH+   +S    +VFV T+L++ Y   G   +A  VF G+  + V   N MI  Y+ 
Sbjct: 29  GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 88

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
           +  S  AF +F  +       +  TF +++  C     ++ GK +     +     ++ V
Sbjct: 89  SERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFV 148

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGI 357
           G A++TMY +    E A ++F  + ++NLI+W+A+I+ +   GH G+A+  F      GI
Sbjct: 149 GTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 208

Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK--GGDLKSA 415
             +     ++++G +  S LE   ++H    +HG      +  ALV++Y +   G+L  A
Sbjct: 209 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVA 268

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
            ++L     +    +N +++G+   +     + +  + + +L  +  D VTF  +L+   
Sbjct: 269 EVILQEMDEQQITAWNVLINGYT--LHGRSREALETYQRLQLEAIPVDKVTFISVLNACT 326

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
           S   L  G+ +H+ +++ G  +DVIV NAL  MY+KCGS++ A +IF  +  R  VSWN 
Sbjct: 327 SSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNG 386

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ML AYA HG  +  L L  +M++EG   + I+ + VL +C ++GL   G   F+ +    
Sbjct: 387 MLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDR 446

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
           G+    EH+ C+VDLLGRAG+L EA   I+  P     + W +L+   ++  +     LA
Sbjct: 447 GIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLA 506

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
           +++LL+L+P ++ + +++SN+Y+ +G    AAK+R  M   R+ K  G S I++ +K+H 
Sbjct: 507 ARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHE 566

Query: 716 FVASGKDHPESEEIYSKLDLL 736
           F      HP + EIY K++ L
Sbjct: 567 FRVRDTSHPRAAEIYDKVEEL 587



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 226/482 (46%), Gaps = 7/482 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +H+ + +S    D F    L+N Y K   L  A+K+FDGM  RS  TW S+I  
Sbjct: 26  LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 85

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y           I   M    E+ +  T   IL+AC   E+   G+ +     ++ FE +
Sbjct: 86  YSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELD 145

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           +FVGT+LI+MY        A  VF  +  K++   + +I  +   G    A   F  +  
Sbjct: 146 LFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQ 205

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK--HGMS 311
               PN  TF ++++      G+EE  ++H L  + G+    ++ NA+V +YG+   G  
Sbjct: 206 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGEL 265

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           + AE +   + E+ + +W  LI+GY   G   +A+  +       I  D     +V++ C
Sbjct: 266 DVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNAC 325

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +  ++L  G  +H  A++ G  SDV +  AL ++Y+K G +++AR + D    +    +N
Sbjct: 326 TSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWN 385

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAYS 490
            +L  + +    + E+V+ L  +    G++ + +TF  +LS  +    +  G +  H+  
Sbjct: 386 GMLQAYAQH--GESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLG 443

Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQ-IFKGISDRDIVSWNAMLSAYALHG-LGKG 548
              G          L+ +  + G +  A + I K  S+ +IV+W ++L A  +H  L +G
Sbjct: 444 HDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRG 503

Query: 549 AL 550
            L
Sbjct: 504 KL 505



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 181/389 (46%), Gaps = 8/389 (2%)

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +L    + N  TF NV++   +   + +GK +H    +     ++ V  A+V  Y K G 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
             +A ++FD +  R++ +W ++IS Y  S   G+A   F      G  CD     +++D 
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C    NL+ G  +     +  +  D+ +GTAL+ +YA+    ++A  +      K    +
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
           +AI++ F +     E   +  F   +  G+ P+ VTF  LL+   + + L     +H   
Sbjct: 181 SAIITAFADHGHCGE--ALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLI 238

Query: 491 IKTGYAADVIVGNALITMYAKC--GSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
            + G      + NAL+ +Y +C  G +D A  I + + ++ I +WN +++ Y LHG  + 
Sbjct: 239 TEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSRE 298

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYS-GLSEGGICLFNEIEQIYGLRPILEHFACM 607
           AL  ++ ++ E    D ++ + VL AC  S  L+EG +   N +E   GL   +     +
Sbjct: 299 ALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE--CGLDSDVIVKNAL 356

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLW 636
            ++  + G +  A  + +S P   S + W
Sbjct: 357 TNMYSKCGSMENARRIFDSMPI-RSAVSW 384



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 3/350 (0%)

Query: 69  IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
           +   +L+ G+ V   + ++  + D F    LI +YA+    + A ++F  M  ++ ITW+
Sbjct: 122 VNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWS 181

Query: 129 SLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
           ++I  + D G     L     M +     N  T   +L   +         +IH    + 
Sbjct: 182 AIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEH 241

Query: 189 GFENNVFVGTSLISMY--FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
           G ++   +  +L+++Y    +G    AE + + +  + +   N +I  Y   G S  A  
Sbjct: 242 GLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALE 301

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
            +  L       +  TF +V++ C  +  + EGK +H  AV+ G+  ++ V NA+  MY 
Sbjct: 302 TYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYS 361

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  E A R+FD++  R+ +SW  ++  Y + G   + +    +    G+  +     +
Sbjct: 362 KCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVS 421

Query: 367 VIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           V+  CS    +  G Q  H      G          LVD+  + G L+ A
Sbjct: 422 VLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEA 471



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  L  G+ +H+  ++ G  +D    N L N+Y+K   ++ A+++FD M +RSA++W  +
Sbjct: 328 STSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGM 387

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ-IHAFAIKSG 189
           ++ Y   G+ E VL +   M +   K N  T   +L +CS       G Q  H+     G
Sbjct: 388 LQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRG 447

Query: 190 FENNVFVGTSLISMYFHSGCFREAE 214
            E        L+ +   +G  +EAE
Sbjct: 448 IEVKTEHYGCLVDLLGRAGKLQEAE 472


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 162/491 (32%), Positives = 270/491 (54%), Gaps = 7/491 (1%)

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
           A HV   +       +  T++ +I  C  +  V EGK++H      G   +  + N ++ 
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
           MY K  + EEA+ +FD + ERN++SWT +IS Y  +    +A+         G+  +   
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            ++V+  C    +L+   QLH + +K G  SDV + +AL+D+Y+K G+L  A  +     
Sbjct: 389 FSSVLRACERLYDLK---QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445

Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
              +  +N+I++ F +    D ++ + L+   R  G   D  T + +L    S + L  G
Sbjct: 446 TGDSVVWNSIIAAFAQH--SDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELG 503

Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
           R  H + +K  +  D+I+ NAL+ MY KCGS++ A  IF  ++ +D++SW+ M++  A +
Sbjct: 504 RQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQN 561

Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
           G    AL LFE MK +G  P+ I+ILGVL AC ++GL   G   F  +  +YG+ P  EH
Sbjct: 562 GFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREH 621

Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
           + CM+DLLGRA +L + + LI+        + WRTL+   +   N   +  A+K +L L+
Sbjct: 622 YGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLD 681

Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
           P+D G+++L+SN+YA     ++ A+VR TM    + KE GCSWIE++ ++H F+   K H
Sbjct: 682 PQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSH 741

Query: 724 PESEEIYSKLD 734
           P+ +EI  +L+
Sbjct: 742 PQIDEINRQLN 752



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 160/289 (55%), Gaps = 5/289 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           + +L+K  +  G ++ G+ VH  +  +G    TF  N LIN+Y KFN L+ AQ LFD M 
Sbjct: 288 YSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMP 347

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
            R+ ++WT++I  Y +    +  + +   M+R     N  T S +L AC  L D    +Q
Sbjct: 348 ERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---KQ 404

Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
           +H++ +K G E++VFV ++LI +Y   G   EA  VFR +   D    N +I  + +  +
Sbjct: 405 LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSD 464

Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
            + A H++  +    F  +  T T+V+  C     +E G+Q H   +KF   +++ + NA
Sbjct: 465 GDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFD--QDLILNNA 522

Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
           ++ MY K G  E+A+ +F+ ++++++ISW+ +I+G  ++G   +A+N F
Sbjct: 523 LLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLF 571



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 2/202 (0%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDD 137
           + +H++++K G ++D F  + LI++Y+K   L  A K+F  M+   ++ W S+I  +   
Sbjct: 403 KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQH 462

Query: 138 GDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
            D +  L +   M R     ++ T + +L AC+ L     G Q H   +K  F+ ++ + 
Sbjct: 463 SDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILN 520

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
            +L+ MY   G   +A+ +F  +A KDV   + MI    + G S  A ++F  +     +
Sbjct: 521 NALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPK 580

Query: 258 PNDYTFTNVISVCYENLGVEEG 279
           PN  T   V+  C     V EG
Sbjct: 581 PNHITILGVLFACSHAGLVNEG 602


>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 195/641 (30%), Positives = 329/641 (51%), Gaps = 14/641 (2%)

Query: 74  LKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
           ++ G  +HA   K G    ++   ++ ++LY++ + ++ A K+FD + VR  + WT+L+ 
Sbjct: 125 IRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVI 184

Query: 133 GYLDDGDYESVLGIAC--DMYR---SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK 187
           GY+ +G  ES +G+ C  +MYR     +K N  T      AC  L D + G  +H   +K
Sbjct: 185 GYVQNG--ESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVK 242

Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
           +G    + + +S++SMY   G  REA   F  +  KD+     MI  Y + G        
Sbjct: 243 NGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRF 302

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
           F  +L +   P+      ++S    ++ V  GK  HGL ++     +  V N++++MY K
Sbjct: 303 FWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCK 362

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
            GM   AER+F   S+ ++  W  +I GY R G   K I  F E   LGI  +S  + + 
Sbjct: 363 FGMLSFAERLFQR-SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSA 421

Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
           I  C     + LG  +H   IK      + +  +L+++Y K   +  +  + +  S +  
Sbjct: 422 IASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDV 480

Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
             +NA++S  +       E+ + LF    +    P+  T   +LS  +  A L +G  LH
Sbjct: 481 ILWNALISAHIH--VKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLH 538

Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
            Y  + G+  ++ +G AL+ MYAKCG ++ + ++F  + ++D++ WNAM+S Y ++G  +
Sbjct: 539 RYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAE 598

Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
            A+ +F  M+     P++I+ L +L AC ++GL E G  +F ++ Q Y ++P L+H+ CM
Sbjct: 599 SAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHYTCM 657

Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
           VDLLGR+  L EA  L+ S P      +W  L+S  K     +  I   K  +D EP++ 
Sbjct: 658 VDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPEND 717

Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMND-LRLSKEAGCSWI 707
           G +I+V+NMY+  G  DEA  VR TM D   + K+AG S +
Sbjct: 718 GYYIMVANMYSSIGRWDEAENVRRTMKDRCSMGKKAGWSMV 758



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 165/647 (25%), Positives = 292/647 (45%), Gaps = 17/647 (2%)

Query: 55  TLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQK 114
           ++L  D  +L+ +S     L+     HA  + +G+  + F A  LI+LY   N    +  
Sbjct: 5   SMLKLDHGELISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSST 64

Query: 115 LFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLE 173
           LF  +  +    W S +K       Y   L     + RSE     H T  ++  + +   
Sbjct: 65  LFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFY-SLMRSENVLPNHFTFPMVASSYAHFM 123

Query: 174 DRIFGEQIHAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
               G  +HA A K G F  N  VG+S +S+Y       +A  VF  +  +DV     ++
Sbjct: 124 MIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALV 183

Query: 233 LEYNKAGESEMAFHVFVHLL---SSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVK 288
           + Y + GESEM       +        +PN  T       C  NLG +  G+ LHGL VK
Sbjct: 184 IGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLAC-GNLGDLVSGRCLHGLVVK 242

Query: 289 FGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAING 348
            G+   + + +++++MY K G+  EA + F  +  ++L+SWT++I  Y R G     +  
Sbjct: 243 NGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRF 302

Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
           F E L+  +C D   +  ++ G     ++  G   HG  I+  Y  D  +  +L+ +Y K
Sbjct: 303 FWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCK 362

Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
            G L  A  L    S      +N ++ G+  +I  + + +  LF + +  G+  + V   
Sbjct: 363 FGMLSFAERLFQR-SQGSIEYWNFMIVGY-GRIGKNVKCIQ-LFREMQYLGIRSESVGIV 419

Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
             ++       +  GRS+H   IK      + V N+LI MY KC  ++ +++IF   S+R
Sbjct: 420 SAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SER 478

Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
           D++ WNA++SA+      + A+ LF+ M  E   P+  +++ VL AC +    E G  L 
Sbjct: 479 DVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLH 538

Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL--M 646
             I +  G +  L     +VD+  + G+L ++  + +S    +  + W  ++S   +   
Sbjct: 539 RYINE-KGFKLNLPLGTALVDMYAKCGQLEKSREVFDSM-MEKDVICWNAMISGYGMNGY 596

Query: 647 ANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
           A S   I       +++P +  +F+ + +  A  G+++E   V   M
Sbjct: 597 AESAIEIFNLMEESNVKPNEI-TFLSLLSACAHAGLVEEGKNVFAKM 642



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 126/246 (51%), Gaps = 1/246 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G++ LG+++H  ++K          N+LI +Y K ++++V+ ++F+    R  I W +LI
Sbjct: 429 GEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNRS-ERDVILWNALI 487

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
             ++    YE  + +   M   ++  N  T  V+L ACS L     GE++H +  + GF+
Sbjct: 488 SAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFK 547

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            N+ +GT+L+ MY   G   ++  VF  +  KDV C N MI  Y   G +E A  +F  +
Sbjct: 548 LNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLM 607

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
             S+ +PN+ TF +++S C     VEEGK +      + V   +     +V + G+    
Sbjct: 608 EESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPNLKHYTCMVDLLGRSCNL 667

Query: 312 EEAERM 317
           EEAE +
Sbjct: 668 EEAEEL 673


>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
 gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
          Length = 1260

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 190/630 (30%), Positives = 319/630 (50%), Gaps = 5/630 (0%)

Query: 111  VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
            + ++L+    + S   W   I+  ++  D    L +  +M R   + N  T   + +AC+
Sbjct: 610  IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 669

Query: 171  LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
             L D    E +HA  IKS F ++VFVGT+ + M+        A  VF  +  +D    N 
Sbjct: 670  RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 729

Query: 231  MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
            M+  + ++G ++ AF +F  +  ++  P+  T   +I        ++  + +H + ++ G
Sbjct: 730  MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 789

Query: 291  VVREISVGNAIVTMYGKHGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAING 348
            V  +++V N  ++ YGK G  + A+ +F+AI   +R ++SW ++   Y   G    A   
Sbjct: 790  VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 849

Query: 349  FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
            +   L      D S    +   C     L  G  +H  AI  G   D+      + +Y+K
Sbjct: 850  YCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSK 909

Query: 409  GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
              D  SAR+L D  + +    +  ++SG+ EK   D ++ + LF     +G +PD VT  
Sbjct: 910  SEDTCSARLLFDIMTSRTCVSWTVMISGYAEK--GDMDEALALFHAMIKSGEKPDLVTLL 967

Query: 469  RLLSLSASQACLVRGRSLHAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISD 527
             L+S       L  G+ + A +   G   D V++ NALI MY+KCGSI  A  IF    +
Sbjct: 968  SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 1027

Query: 528  RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
            + +V+W  M++ YAL+G+   AL LF +M    + P+ I+ L VLQAC +SG  E G   
Sbjct: 1028 KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEY 1087

Query: 588  FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
            F+ ++Q+Y + P L+H++CMVDLLGR G+L EA+ LI +        +W  L++  K+  
Sbjct: 1088 FHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHR 1147

Query: 648  NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
            N K +  A++ L +LEP+ A  ++ ++N+YA  GM D  A++R+ M    + K  G S I
Sbjct: 1148 NVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 1207

Query: 708  EIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
            +++ K H F      H E+E IY  L+ L+
Sbjct: 1208 QVNGKNHSFTVGEHGHVENEVIYFTLNGLS 1237



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 230/498 (46%), Gaps = 27/498 (5%)

Query: 61   WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
            +P + K      D+   + VHA L+KS   +D F     ++++ K N +D A K+F+ M 
Sbjct: 661  FPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP 720

Query: 121  VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
             R A TW +++ G+   G  +    +  +M  +E   +  T   ++++ S  +     E 
Sbjct: 721  ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA 780

Query: 181  IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV--NFMILEYNKA 238
            +HA  I+ G +  V V  + IS Y   G    A+ VF  +   D   V  N M   Y+  
Sbjct: 781  MHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVF 840

Query: 239  GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
            GE+  AF ++  +L  +F+P+  TF N+ + C     + +G+ +H  A+  G  ++I   
Sbjct: 841  GEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAI 900

Query: 299  NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
            N  ++MY K   +  A  +FD ++ R  +SWT +ISGY   G   +A+  F   +  G  
Sbjct: 901  NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK 960

Query: 359  CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARM 417
             D   L ++I GC    +LE G  +   A  +G   D V +  AL+D+Y+K G +  AR 
Sbjct: 961  PDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 1020

Query: 418  LLDGFSCKYTAEFNAILSG------FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLL 471
            + D    K    +  +++G      F+E         + LFS+      +P+ +TF  +L
Sbjct: 1021 IFDNTPEKTVVTWTTMIAGYALNGIFLE--------ALKLFSKMIDLDYKPNHITFLAVL 1072

Query: 472  SLSASQACLVRGRSL-----HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
               A    L +G          Y+I  G    +   + ++ +  + G ++ A ++ + +S
Sbjct: 1073 QACAHSGSLEKGWEYFHIMKQVYNISPG----LDHYSCMVDLLGRKGKLEEALELIRNMS 1128

Query: 527  DR-DIVSWNAMLSAYALH 543
             + D   W A+L+A  +H
Sbjct: 1129 AKPDAGIWGALLNACKIH 1146


>gi|15229605|ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49740
 gi|6723419|emb|CAB66912.1| putative protein [Arabidopsis thaliana]
 gi|332645063|gb|AEE78584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 737

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 199/635 (31%), Positives = 334/635 (52%), Gaps = 32/635 (5%)

Query: 90  QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAIT-WTSLIKGYLDDGDYESVLGIAC 148
           + D +    L++   K   ++ A ++FD M  R  +  W ++I G  + G +E+ + +  
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFR 179

Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSG 208
           +M++   + ++   + IL  C       FG+Q+H+  IK+GF     V  +LI+MYF+  
Sbjct: 180 EMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQ 238

Query: 209 CFREAENVFR--GLAYKDVRCVNFMI--LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
              +A  VF    +A +D    N +I  L   K  ES +   VF  +L +   P D TF 
Sbjct: 239 VVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLL---VFRKMLEASLRPTDLTFV 295

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
           +V+  C        G Q+HGLA+K G  +   V NA +TMY        A ++F+++ E+
Sbjct: 296 SVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEK 352

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS----SCLATVIDGCSVCSNLELG 380
           +L++W  +IS Y ++  G  A++ +     +G+  D     S LAT +D       L++ 
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD-------LDVL 405

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
             +    IK G  S + +  AL+  Y+K G ++ A +L +    K    +NAI+SGF   
Sbjct: 406 EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHN 465

Query: 441 ---IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
                  E    +L S+ R+    PD  T S LLS+  S + L+ G   HAY ++ G   
Sbjct: 466 GFPFEGLERFSCLLESEVRIL---PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFK 522

Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
           + ++GNALI MY++CG+I  + ++F  +S++D+VSWN+++SAY+ HG G+ A+  ++ M+
Sbjct: 523 ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQ 582

Query: 558 REG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
            EG   PD  +   VL AC ++GL E G+ +FN + + +G+   ++HF+C+VDLLGRAG 
Sbjct: 583 DEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGH 642

Query: 617 LSEAMNL--INSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
           L EA +L  I+         +W  L S      + K   + +K L++ E  D   ++ +S
Sbjct: 643 LDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLS 702

Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI 709
           N+YAG GM  EA + R  +N +   K+ GCSW+ +
Sbjct: 703 NIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 266/523 (50%), Gaps = 33/523 (6%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD--GMLVRSAITWTS 129
           G L  G+ VH+ ++K+G    +   N LI +Y     +  A  +F+   + VR  +T+  
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262

Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           +I G       ES+L +   M  +  +  + T   ++ +CS       G Q+H  AIK+G
Sbjct: 263 VIDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTG 318

Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA--GESEMAFHV 247
           +E    V  + ++MY     F  A  VF  L  KD+   N MI  YN+A  G+S M+ + 
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378

Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
            +H++    +P+++TF ++++    +L ++  + +    +KFG+  +I + NA+++ Y K
Sbjct: 379 RMHIIG--VKPDEFTFGSLLAT---SLDLDVLEMVQACIIKFGLSSKIEISNALISAYSK 433

Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL--DLGICCDSSCLA 365
           +G  E+A+ +F+    +NLISW A+ISG+  +G   + +  F   L  ++ I  D+  L+
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLS 493

Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
           T++  C   S+L LG Q H + ++HG   +  +G AL+++Y++ G ++++  + +  S K
Sbjct: 494 TLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK 553

Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
               +N+++S +  +  + E  V    + Q    + PD  TFS +LS  +    +  G  
Sbjct: 554 DVVSWNSLISAY-SRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLE 612

Query: 486 LHAYSIK-TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS----WNAMLSAY 540
           +    ++  G   +V   + L+ +  + G +D A  + K IS++ I S    W A+ SA 
Sbjct: 613 IFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK-ISEKTIGSRVDVWWALFSAC 671

Query: 541 ALHG---LGKG-ALLLFEEMKREGFAPDDISILGVLQACIYSG 579
           A HG   LGK  A LL E+ K      DD S+  V  + IY+G
Sbjct: 672 AAHGDLKLGKMVAKLLMEKEK------DDPSVY-VQLSNIYAG 707



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 148/615 (24%), Positives = 278/615 (45%), Gaps = 77/615 (12%)

Query: 131 IKGYLDDGDYESVLGIACDMYR-SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
           + G    G+  + L +  D++R +  + ++++ S+ +     L D IFG Q+H +AI+SG
Sbjct: 28  LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87

Query: 190 F-------------------------------ENNVFVGTSLISMYFHSGCFREAENVFR 218
                                           E +V+  T+L+S  F  G    A  VF 
Sbjct: 88  LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147

Query: 219 GLAYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC-YENLGV 276
            +  + DV   N MI    ++G  E +  +F  +       + + F  ++S+C Y +L  
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSL-- 205

Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA--ISERNLISWTALIS 334
           + GKQ+H L +K G     SV NA++TMY    +  +A  +F+   ++ R+ +++  +I 
Sbjct: 206 DFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVID 265

Query: 335 GYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV---CSNLELGLQLHGFAIKHG 391
           G      G K     L F  +    ++S   T +   SV   CS   +G Q+HG AIK G
Sbjct: 266 GLA----GFKRDESLLVFRKM---LEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTG 318

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
           Y     +  A + +Y+   D  +A  + +    K    +N ++S + +  A   +  M +
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ--AKLGKSAMSV 376

Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
           + +  + G++PD  TF  LL+ S     L     + A  IK G ++ + + NALI+ Y+K
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSK 433

Query: 512 CGSIDGAFQIFKGISDRDIVSWNAMLS-----AYALHGLGKGALLLFEEMKREGFAPDDI 566
            G I+ A  +F+    ++++SWNA++S      +   GL + + LL  E++     PD  
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR---ILPDAY 490

Query: 567 SILGVLQACIYSGLSEGGICLFNEIEQIYGLR--PILEHFA--CMVDLLGRAGRLSEAMN 622
           ++  +L  C+    S   + L ++    Y LR     E      ++++  + G +  ++ 
Sbjct: 491 TLSTLLSICV----STSSLMLGSQT-HAYVLRHGQFKETLIGNALINMYSQCGTIQNSLE 545

Query: 623 LINSSPFSESPLL-WRTLVSVSKLMANSKFSILASKRLLDLEPK---DAGSFILVSNMYA 678
           + N    SE  ++ W +L+S        + ++   K + D E K   DA +F  V +  +
Sbjct: 546 VFN--QMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQD-EGKVIPDAATFSAVLSACS 602

Query: 679 GQGMLDEAAKVRTTM 693
             G+++E  ++  +M
Sbjct: 603 HAGLVEEGLEIFNSM 617



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           L+ I + +  L LG   HA++L+ G   +T   N LIN+Y++   +  + ++F+ M  + 
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKD 554

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEHTCSVILEACS---LLEDRIFG 178
            ++W SLI  Y   G+ E+ +     M + E K   +  T S +L ACS   L+E+ +  
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTM-QDEGKVIPDAATFSAVLSACSHAGLVEEGL-- 611

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR 218
           E  ++     G   NV   + L+ +   +G   EAE++ +
Sbjct: 612 EIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK 651


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 166/550 (30%), Positives = 289/550 (52%), Gaps = 2/550 (0%)

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +N F+   ++ MY     F  AE  F  +  +D+     +I  Y + G  + A  +F+ +
Sbjct: 112 SNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRM 171

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
           L     PN   F+ +I    +   ++ GKQ+H   ++     +IS+   I  MY K G  
Sbjct: 172 LDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWL 231

Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
           + AE   + ++ ++ ++ T L+ GY ++     A+  F + +  G+  D    + ++  C
Sbjct: 232 DGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKAC 291

Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFN 431
           +   +L  G Q+H + IK G  S+V +GT LVD Y K    ++AR   +         ++
Sbjct: 292 AALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWS 351

Query: 432 AILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSI 491
           A+++G+ +    D    + +F   R  G+  +   ++ +    ++ + L+ G  +HA +I
Sbjct: 352 ALIAGYCQSGKFDR--ALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAI 409

Query: 492 KTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALL 551
           K G  A +   +A+ITMY+KCG +D A Q F  I   D V+W A++ A+A HG    AL 
Sbjct: 410 KKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALR 469

Query: 552 LFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLL 611
           LF+EM+  G  P+ ++ +G+L AC +SGL + G    + +   YG+ P ++H+ CM+D+ 
Sbjct: 470 LFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIY 529

Query: 612 GRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFI 671
            RAG L EA+ +I S PF    + W++L+       N +  ++A+  +  L+P D+ +++
Sbjct: 530 SRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYV 589

Query: 672 LVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYS 731
           ++ N+YA  G  DEAA+ R  M +  L KE  CSWI +  K+H FV   + HP++E+IYS
Sbjct: 590 IMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYS 649

Query: 732 KLDLLNDEMK 741
           KL  LN   K
Sbjct: 650 KLKELNVSFK 659



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 228/494 (46%), Gaps = 10/494 (2%)

Query: 46  ISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK 105
           I+ +S + R+     +  L K+    G L  G+  H  L +  + N  F  N ++ +Y  
Sbjct: 73  IAGISINPRS-----YEYLFKMCGTLGALSDGKLFHNRLQRMANSN-KFIDNCILQMYCD 126

Query: 106 FNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVI 165
                 A++ FD ++ R   +W ++I  Y ++G  +  +G+   M       N    S +
Sbjct: 127 CKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTL 186

Query: 166 LEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDV 225
           + + +       G+QIH+  I+  F  ++ + T + +MY   G    AE     +  K  
Sbjct: 187 IMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSA 246

Query: 226 RCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGL 285
                +++ Y +A  +  A  +F  ++S   E + + F+ ++  C     +  GKQ+H  
Sbjct: 247 VACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSY 306

Query: 286 AVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKA 345
            +K G+  E+SVG  +V  Y K    E A + F++I E N  SW+ALI+GY +SG   +A
Sbjct: 307 CIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRA 366

Query: 346 INGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDI 405
           +  F      G+  +S     +   CS  S+L  G Q+H  AIK G ++ +   +A++ +
Sbjct: 367 LEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITM 426

Query: 406 YAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
           Y+K G +  A           T  + AI+            + + LF + + +G+ P+ V
Sbjct: 427 YSKCGKVDYAHQAFLAIDKPDTVAWTAIICA--HAYHGKASEALRLFKEMQGSGVRPNVV 484

Query: 466 TFSRLLSLSASQACLVRGRS-LHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKG 524
           TF  LL+  +    +  G+  L + + K G    +   N +I +Y++ G +  A ++ + 
Sbjct: 485 TFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRS 544

Query: 525 IS-DRDIVSWNAML 537
           +  + D++SW ++L
Sbjct: 545 MPFEPDVMSWKSLL 558



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 188/417 (45%), Gaps = 18/417 (4%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L LG+ +H+ L++     D      + N+Y K   LD A+   + M  +SA+  T L+ G
Sbjct: 196 LDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVG 255

Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
           Y         L +   M     + +    S+IL+AC+ L D   G+QIH++ IK G E+ 
Sbjct: 256 YTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE 315

Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
           V VGT L+  Y     F  A   F  +   +    + +I  Y ++G+ + A  VF  + S
Sbjct: 316 VSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRS 375

Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
                N + + N+   C     +  G Q+H  A+K G+V  +S  +A++TMY K G  + 
Sbjct: 376 KGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDY 435

Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
           A + F AI + + ++WTA+I  +   G   +A+  F E    G+  +      +++ CS 
Sbjct: 436 AHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSH 495

Query: 374 CSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGG----------------DLKSAR 416
              ++ G Q L     K+G    +     ++DIY++ G                D+ S +
Sbjct: 496 SGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWK 555

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIAD-DEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
            LL G   +   E   I +  + ++   D    +++F+   LAG   +   F ++++
Sbjct: 556 SLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMA 612



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 2/274 (0%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
           ++K     GDL  G+ +H++ +K G +++      L++ Y K  R + A++ F+ +   +
Sbjct: 287 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 346

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
             +W++LI GY   G ++  L +   +       N    + I +ACS + D I G QIHA
Sbjct: 347 DFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHA 406

Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
            AIK G    +   +++I+MY   G    A   F  +   D      +I  +   G++  
Sbjct: 407 DAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASE 466

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIV 302
           A  +F  +  S   PN  TF  +++ C  +  V+EGKQ L  +  K+GV   I   N ++
Sbjct: 467 ALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMI 526

Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
            +Y + G+  EA  +  ++  E +++SW +L+ G
Sbjct: 527 DIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 165/499 (33%), Positives = 273/499 (54%), Gaps = 8/499 (1%)

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
           +HLL  +  P   TF ++I  C +   + +G  +H   V  G  ++  +   ++ MY + 
Sbjct: 67  IHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYEL 126

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G  + A ++FD   ER +  W AL       G G + ++ +++   +GI  D      V+
Sbjct: 127 GSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVL 186

Query: 369 DGCSV----CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
             C V     S L+ G ++H   ++HGY +++ + T L+D+YAK G +  A  +      
Sbjct: 187 KACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPT 246

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME--PDPVTFSRLLSLSASQACLVR 482
           K    ++A+++ F +   +     + LF    L   +  P+ VT   +L   A  A L +
Sbjct: 247 KNFVSWSAMIACFAKN--EMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQ 304

Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
           G+ +H Y ++ G  + + V NALITMY +CG I    ++F  + +RD+VSWN+++S Y +
Sbjct: 305 GKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGM 364

Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILE 602
           HG GK A+ +FE M  +G +P  IS + VL AC ++GL E G  LF  +   Y + P +E
Sbjct: 365 HGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGME 424

Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDL 662
           H+ACMVDLLGRA RL EA+ LI    F   P +W +L+   ++  N + +  AS  L +L
Sbjct: 425 HYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFEL 484

Query: 663 EPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKD 722
           EP++AG+++L++++YA   M  EA  V   +    L K  GCSWIE+  K++ FV+  + 
Sbjct: 485 EPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEH 544

Query: 723 HPESEEIYSKLDLLNDEMK 741
           +P+ EEI++ L  L++EMK
Sbjct: 545 NPQIEEIHALLVKLSNEMK 563



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 166/356 (46%), Gaps = 17/356 (4%)

Query: 77  GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
           G  VH  L+ SG   D F A  LIN+Y +   +D A+K+FD    R+   W +L +    
Sbjct: 97  GLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAM 156

Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF----GEQIHAFAIKSGFEN 192
            G  + +L +   M       +  T + +L+AC + E  +     G++IHA  ++ G+E 
Sbjct: 157 VGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEA 216

Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF--VH 250
           N+ V T+L+ +Y   G    A +VF  +  K+    + MI  + K      A  +F  + 
Sbjct: 217 NIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMM 276

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           L + D  PN  T  NV+  C     +E+GK +HG  ++ G+   + V NA++TMYG+ G 
Sbjct: 277 LEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGE 336

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
               +R+FD +  R+++SW +LIS Y   G G KAI  F   +  G         TV+  
Sbjct: 337 ILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGA 396

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLG------TALVDIYAKGGDLKSARMLLD 420
           CS       GL   G  +    LS  R+         +VD+  +   L  A  L++
Sbjct: 397 CS-----HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 447



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 126/264 (47%), Gaps = 4/264 (1%)

Query: 74  LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
           L+ G+ +HA +L+ G + +      L+++YAKF  +  A  +F  M  ++ ++W+++I  
Sbjct: 199 LQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIAC 258

Query: 134 YL-DDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
           +  ++   +++      M  + +   N  T   +L+AC+ L     G+ IH + ++ G +
Sbjct: 259 FAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLD 318

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           + + V  +LI+MY   G     + VF  +  +DV   N +I  Y   G  + A  +F ++
Sbjct: 319 SILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENM 378

Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +     P+  +F  V+  C     VEEGK L   +  K+ +   +     +V + G+   
Sbjct: 379 IHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 438

Query: 311 SEEAERMFDAIS-ERNLISWTALI 333
            +EA ++ + +  E     W +L+
Sbjct: 439 LDEAIKLIEDMHFEPGPTVWGSLL 462


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 163/537 (30%), Positives = 305/537 (56%), Gaps = 34/537 (6%)

Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIV 302
           A   ++ +  S   P+++ F  V+        ++ G+Q+H  AVKFG     ++V N +V
Sbjct: 76  AISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLV 135

Query: 303 TMYGKHG--------------------MSEEAERMFDAISERNLISWTALISGYVRSGHG 342
            MYGK G                      ++++ +F++  +R+++SW  +IS + +S   
Sbjct: 136 NMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRF 195

Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTA 401
            +A+  F   +  G+  D   +A+V+  CS    L++G ++H + +++  L  +  +G+A
Sbjct: 196 SEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSA 255

Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ-RLAGM 460
           LVD+Y     ++S R + D    +    +NA++SG+     D  E  ++LF +  ++AG+
Sbjct: 256 LVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLD--EKALILFIEMIKVAGL 313

Query: 461 EPDPVTFSRLLSLSA-SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAF 519
            P+  T + ++     S A + +G+ +HAY+I+   A+D+ VG+AL+ MYAKCG ++ + 
Sbjct: 314 LPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSR 373

Query: 520 QIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG-----FAPDDISILGVLQA 574
           ++F  + ++++++WN ++ A  +HG G+ AL LF+ M  E        P++++ + V  A
Sbjct: 374 RVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAA 433

Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
           C +SGL   G+ LF  ++  +G+ P  +H+AC+VDLLGRAG+L EA  L+N+ P     +
Sbjct: 434 CSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKV 493

Query: 635 -LWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
             W +L+   ++  N +   +A+K LL LEP  A  ++L+SN+Y+  G+ ++A +VR  M
Sbjct: 494 GAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNM 553

Query: 694 NDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSS 748
             + + KE GCSWIE   ++H F+A    HP+SE+++  L+ L+++M+ +  V D+S
Sbjct: 554 RQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTS 610



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 212/478 (44%), Gaps = 58/478 (12%)

Query: 6   PANLLQPPFKSQQ-SLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFND---- 60
           P+   QPP   Q+ +  PL  K P    SP+ +S  +++ ++ S +   R+  F +    
Sbjct: 24  PSLQTQPPPSIQKPTASPLTSKTPPKPTSPS-RSTASWVDALRSRT---RSNDFREAIST 79

Query: 61  ---------------WPQLVKISIGSGDLKLGQAVHAFLLK------------------- 86
                          +P ++K   G  DLK G+ +HA  +K                   
Sbjct: 80  YIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYG 139

Query: 87  --SGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL 144
              G  + TF  N L+ +YAK  R+D ++ LF+  + R  ++W ++I  +     +   L
Sbjct: 140 KCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEAL 199

Query: 145 GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-FENNVFVGTSLISM 203
                M     + +  T + +L ACS LE    G++IHA+ +++     N FVG++L+ M
Sbjct: 200 AFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDM 259

Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS-SDFEPNDYT 262
           Y +         VF  +  + +   N MI  Y + G  E A  +F+ ++  +   PN  T
Sbjct: 260 YCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTT 319

Query: 263 FTNVISVCYENL-GVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
             +V+  C  +L  + +GK++H  A++  +  +I+VG+A+V MY K G    + R+F+ +
Sbjct: 320 MASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEM 379

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSS----CLATVIDGCSVCSN 376
             +N+I+W  LI      G G +A+  F   + + G   ++        TV   CS    
Sbjct: 380 PNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGL 439

Query: 377 LELGLQL-HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
           +  GL L +     HG          +VD+  + G L+ A  L++       AEF+ +
Sbjct: 440 ISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMP----AEFDKV 493



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 209/455 (45%), Gaps = 36/455 (7%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           RS  +W   ++      D+   +    +M  S  + +      +L+A S L+D   GEQI
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 182 HAFAIKSGF---------------------ENNVFVGTSLISMYFHSGCFREAENVFRGL 220
           HA A+K G+                      +  F   +L++MY   G   +++ +F   
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             +D+   N MI  ++++     A   F  ++    E +  T  +V+  C     ++ GK
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234

Query: 281 QLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRS 339
           ++H   ++   + E S VG+A+V MY      E   R+FD I  R +  W A+ISGY R+
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294

Query: 340 GHGGKAINGFLEFLDL-GICCDSSCLATVIDGC-SVCSNLELGLQLHGFAIKHGYLSDVR 397
           G   KA+  F+E + + G+  +++ +A+V+  C    + +  G ++H +AI++   SD+ 
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDIT 354

Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQ-- 455
           +G+ALVD+YAK G L  +R + +    K    +N ++      +    E+ + LF     
Sbjct: 355 VGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMAC--GMHGKGEEALELFKNMVA 412

Query: 456 ---RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGN--ALITMYA 510
              R    +P+ VTF  + +  +    +  G +L  Y +K  +  +    +   ++ +  
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF-YRMKHDHGVEPTSDHYACVVDLLG 471

Query: 511 KCGSIDGAFQIFKGISDR--DIVSWNAMLSAYALH 543
           + G ++ A+++   +      + +W+++L A  +H
Sbjct: 472 RAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH 506


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 180/571 (31%), Positives = 292/571 (51%), Gaps = 8/571 (1%)

Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           G Q+HA  +K GF ++  +  +LI MY   G    A  VF G+  ++V     +++ +  
Sbjct: 219 GVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLH 278

Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISV 297
            GE+     +F  +  S   PN++T +  +  C    G   G Q+HG+ V+ G      V
Sbjct: 279 HGEARECLRLFGEMRGSGTSPNEFTLSATLKAC--GGGTRAGVQIHGVCVRTGFEGHDVV 336

Query: 298 GNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL-G 356
            N++V MY K   + +A R+FD I  RNL +W ++ISGY  +G G  ++  F E      
Sbjct: 337 ANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHD 396

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY--LSDVRLGTALVDIYAKGGDLKS 414
              D    A+++  CS       G Q+H      G    S+  L  AL+D+Y K   L  
Sbjct: 397 EQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPV 456

Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
           A  + DG   +   ++  ++ G  ++     ++ M LF +   +G+  D    S ++++ 
Sbjct: 457 AMQVFDGLERRNAIQWTTVIVGHAQE--GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVF 514

Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
           A  A + +G+ +H Y+ KT    DV V N+L+ MY KCG    A + F+ +  R++VSW 
Sbjct: 515 ADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWT 574

Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
           AM++    HG G+ A+ LFEEM+ EG   D+++ L +L AC +SGL +     F+ I Q 
Sbjct: 575 AMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQD 634

Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
             +RP  EH+ACMVDLLGRAG L EA  LI S P   +  +W+TL+S  ++  +      
Sbjct: 635 RRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGRE 694

Query: 655 ASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLH 714
               LL ++  +  +++++SN+ A  G   E   +R  M    L K+ GCSW E+D ++H
Sbjct: 695 VGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVH 754

Query: 715 HFVASGKD-HPESEEIYSKLDLLNDEMKLKV 744
            F   G D HP++ +I   L  +   M+ ++
Sbjct: 755 FFYGGGDDAHPQAGDIRRALREVEARMRERL 785



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 204/423 (48%), Gaps = 10/423 (2%)

Query: 53  ERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVA 112
           ER  +  D   L++ S     L+ G  +HA L+K G  +DT   NNLI++YAK  +L +A
Sbjct: 198 ERRRMIAD---LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMA 254

Query: 113 QKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL 172
            ++FDGM  R+ ++WT+L+ G+L  G+    L +  +M  S    NE T S  L+AC   
Sbjct: 255 GEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG-- 312

Query: 173 EDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMI 232
                G QIH   +++GFE +  V  SL+ MY       +A  VF  +  +++   N MI
Sbjct: 313 GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMI 372

Query: 233 LEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV 291
             Y  AG+   +  VF  +    D +P+++TF +++  C       EG Q+H      GV
Sbjct: 373 SGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGV 432

Query: 292 --VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF 349
                  +  A++ +Y K      A ++FD +  RN I WT +I G+ + G   +A+  F
Sbjct: 433 SPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLF 492

Query: 350 LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKG 409
             F   G+  D   L++V+   +  + +E G Q+H +  K     DV +  +LVD+Y K 
Sbjct: 493 RRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKC 552

Query: 410 GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSR 469
           G    A         +    + A+++G  +       + + LF + +  G+E D V +  
Sbjct: 553 GLTGEAGRRFREMPARNVVSWTAMINGVGKH--GHGREAIDLFEEMQAEGVEADEVAYLA 610

Query: 470 LLS 472
           LLS
Sbjct: 611 LLS 613



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 175/365 (47%), Gaps = 30/365 (8%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G  + G  +H   +++G +     AN+L+ +Y+K      A+++FD +  R+  TW S+I
Sbjct: 313 GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMI 372

Query: 132 KGYLDDGDYESVLGIACDMYRS-EEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
            GY   G     L +  +M R  +E+ +E T + +L+ACS L     G Q+HA     G 
Sbjct: 373 SGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGV 432

Query: 191 E--NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
              +N  +  +L+ +Y        A  VF GL  ++      +I+ + + G+ + A  +F
Sbjct: 433 SPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLF 492

Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
               SS    + +  ++V++V  +   VE+GKQ+H    K     ++SV N++V MY K 
Sbjct: 493 RRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKC 552

Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
           G++ EA R F  +  RN++SWTA+I+G  + GHG +AI+ F E    G+  D      ++
Sbjct: 553 GLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALL 612

Query: 369 DGCS--------------VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
             CS              +C +  +  +   +A              +VD+  + G+L+ 
Sbjct: 613 SACSHSGLVDECRRYFSRICQDRRMRPKAEHYA-------------CMVDLLGRAGELRE 659

Query: 415 ARMLL 419
           A+ L+
Sbjct: 660 AKELI 664



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 12/229 (5%)

Query: 470 LLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD 529
           LL  SA  + L  G  LHA  +K G+ +D ++ N LI MYAKCG +  A ++F G+ +R+
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 265

Query: 530 IVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC---IYSGLSEGGIC 586
           +VSW A++  +  HG  +  L LF EM+  G +P++ ++   L+AC     +G+   G+C
Sbjct: 266 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVC 325

Query: 587 LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLM 646
           +    E   G   +      M       G      ++I S   +     W +++S     
Sbjct: 326 VRTGFE---GHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLAT----WNSMISGYAHA 378

Query: 647 ANSKFSILASKRLLDLEPKDAGSFILVSNMYA--GQGMLDEAAKVRTTM 693
              + S+L  + +     +    F   S + A  G G   E A+V   M
Sbjct: 379 GQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAM 427


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 177/582 (30%), Positives = 296/582 (50%), Gaps = 35/582 (6%)

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
            N+  G SL+S    +G  R+ E +F  L  +D    N ++  +++AG    A   +V L
Sbjct: 75  RNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVAL 134

Query: 252 LSSD--FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           L  +    P+  T + V+ V         G+Q+H   ++ G       G+ +V MY K G
Sbjct: 135 LRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVG 194

Query: 310 -------------------------------MSEEAERMFDAISERNLISWTALISGYVR 338
                                          M  EA  +F+AI ER+ I+WT +++G  +
Sbjct: 195 PIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQ 254

Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
           +G   +A++ F      G+  D     +++  C   + LE G Q+H +  +  Y  +V +
Sbjct: 255 NGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFV 314

Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
           G+ALVD+Y+K   ++ A  +      K    + A++ G+ +    +E   + +FS+ +  
Sbjct: 315 GSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEE--AVRVFSEMQRD 372

Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
           G++PD  T   ++S  A+ A L  G   H  ++ +G    V V NAL+T+Y KCGSI+ A
Sbjct: 373 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDA 432

Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
            ++F  +S  D VSW A++  YA  G  K  + LFE+M  +G  PD ++ +GVL AC  S
Sbjct: 433 HRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRS 492

Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
           GL + G   F+ ++Q + + P+ +H+ CM+DL  R+G L +A   I   P       W T
Sbjct: 493 GLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWAT 552

Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
           L+S  +L  + +    A++ LL L+P++  S++L+ +M+A +G  ++ AK+R  M D ++
Sbjct: 553 LLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQV 612

Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
            KE GCSWI+  +K+H F A  + HP S  IY KL  LN +M
Sbjct: 613 KKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKM 654



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 218/448 (48%), Gaps = 38/448 (8%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD------ 117
           +V ++   GD  LG+ VH  +L+ G     F  + L+++YAK   +  A+++FD      
Sbjct: 151 VVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKN 210

Query: 118 ---------GMLV----------------RSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
                    G+L                 R +ITWT+++ G   +G     L +   M  
Sbjct: 211 VVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRA 270

Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
                +++T   IL AC  L     G+QIHA+  ++ +E+NVFVG++L+ MY      R 
Sbjct: 271 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRL 330

Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
           AE VFR + +K++     MI+ Y + G  E A  VF  +     +P+D+T  +VIS C  
Sbjct: 331 AEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCAN 390

Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
              +EEG Q H LA+  G+   ++V NA+VT+YGK G  E+A R+FD +S  + +SWTAL
Sbjct: 391 LASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 450

Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-LHGFAIKHG 391
           + GY + G   + I+ F + L  G+  D      V+  CS    ++ G    H     H 
Sbjct: 451 VMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHD 510

Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFS-CKYTAEFNAILSGFMEKIADDEEDVMV 450
            +      T ++D+Y++ G LK A   +     C     +  +LS    ++  D E  + 
Sbjct: 511 IVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSAC--RLRGDME--IG 566

Query: 451 LFSQQRLAGMEP-DPVTFSRLLSLSASQ 477
            ++ + L  ++P +P ++  L S+ AS+
Sbjct: 567 KWAAENLLKLDPQNPASYVLLCSMHASK 594



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 237/547 (43%), Gaps = 78/547 (14%)

Query: 76  LGQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
           L  AVHA +L++    + T+  N L+  YA    L  A+++FD M  R+ +T  SL+   
Sbjct: 28  LTAAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSAL 87

Query: 135 LDDG------------------DYESVLG-------------IACDMYRSEE--KFNEHT 161
              G                   Y ++L                  + R E   + +  T
Sbjct: 88  ARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRIT 147

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
            S ++   S L DR  G Q+H   ++ GF    F G+ L+ MY   G   +A  VF  + 
Sbjct: 148 MSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEME 207

Query: 222 YKDVRCVNFMI---LEYNKAGESEMAFH----------------------------VFVH 250
            K+V   N MI   L      E+   F                             VF  
Sbjct: 208 GKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRR 267

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           + +     + YTF ++++ C     +EEGKQ+H    +      + VG+A+V MY K   
Sbjct: 268 MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRS 327

Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
              AE +F  +  +N+ISWTA+I GY ++G G +A+  F E    GI  D   L +VI  
Sbjct: 328 VRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISS 387

Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
           C+  ++LE G Q H  A+  G    V +  ALV +Y K G ++ A  L D  S      +
Sbjct: 388 CANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 447

Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
            A++ G+ +      ++ + LF +    G++PD VTF  +LS  +    + +GRS + +S
Sbjct: 448 TALVMGYAQ--FGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRS-YFHS 504

Query: 491 IKTGYAADVIVGN----ALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALHG- 544
           ++  +  D++  +     +I +Y++ G +  A +  K +    D   W  +LSA  L G 
Sbjct: 505 MQQDH--DIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGD 562

Query: 545 --LGKGA 549
             +GK A
Sbjct: 563 MEIGKWA 569


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 193/653 (29%), Positives = 327/653 (50%), Gaps = 18/653 (2%)

Query: 102 LYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHT 161
           +Y +   +  A++ FD M+VR+ ++W+++I  Y   G     L +   M     K N  T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGTSLISMYFHSGCFREAENVFRGL 220
              +L+AC+ L     G+ IH   +  G   ++V +G ++++MY   G    A  VF  +
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
             K+    N MI   ++    + AF +   +      PN  T  +VI  C     +  G+
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
            +H +    G+  + +V NA+V +YGK G    A    + I  R+ ISWT L++ Y R G
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 341 HGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT 400
           HG +AI         G+  DS     +++ C   + L LG ++H    + G   D  L T
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 300

Query: 401 ALVDIYAKGGDLKSARMLLDGF-SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG 459
           ALVD+Y K G+  +AR   D     +    +NA+L+ ++  + D  ++ + +F++  L G
Sbjct: 301 ALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYV--LRDQGKETLGIFARMSLQG 358

Query: 460 MEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG------YAADVIVGNALITMYAKCG 513
           + PD VTF  +L   AS A L  GR  H+  ++ G       A+  ++  ++I MYAKCG
Sbjct: 359 VAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCG 418

Query: 514 SI-DGAFQIFKGISDR--DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
           S+ D   +  K    R  D+V+W+AM++AY+  GL + AL  F  M++EG  PD +S + 
Sbjct: 419 SLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVS 478

Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
            +  C +SGL    +  F  +   +G+ P   HFAC+VDLL RAG + EA  L+  +P  
Sbjct: 479 AIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLG 538

Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
                W TL+S  +   + + +   + RL  L  +   ++ L+++++      D+    R
Sbjct: 539 AHHSTWMTLLSACRTYGDLERARRVAARLASL--RSGSAYSLLASVFCLSRKWDDVRNAR 596

Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH--PESEEIYSKLDLLNDEMK 741
            ++ +     + GCSWIEI+++++ F A G D   P  EEI+++L+ L  E++
Sbjct: 597 QSLVERGFITQPGCSWIEINNRVYEFFA-GDDRLLPREEEIFAELERLCVEIR 648



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 200/422 (47%), Gaps = 14/422 (3%)

Query: 72  GDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           G + LG+++H  ++  G   +D    N ++N+Y K   +D+A+++F+ M  ++ +TW ++
Sbjct: 72  GAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNTVTWNTM 131

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           I        Y+    +  +M     + N+ T   +++AC+ ++    G  +H      G 
Sbjct: 132 IAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGL 191

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E++  V  +L+++Y   G  R A +   G+  +D      ++  Y + G  + A  V   
Sbjct: 192 ESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKR 251

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
           +     + + +TF N++  C     +  G+++H    + G+  +  +  A+V MYGK G 
Sbjct: 252 MDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGN 311

Query: 311 SEEAERMFDAISE-RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            + A R FD + + R++  W AL++ YV    G + +  F      G+  D+    +++D
Sbjct: 312 PDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILD 371

Query: 370 GCSVCSNLELGLQLHGFAIKHGYL------SDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
            C+  + L LG   H   ++ G        S   L T+++++YAK G L  A+       
Sbjct: 372 ACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKAR 431

Query: 424 CKYTAE---FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
               ++   ++A+++ +  +    EE +   +S Q+  G++PD V+F   ++   S + L
Sbjct: 432 RARASDVVAWSAMVAAY-SQFGLSEEALRCFYSMQQ-EGVKPDSVSFVSAIA-GCSHSGL 488

Query: 481 VR 482
           VR
Sbjct: 489 VR 490



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 17/241 (7%)

Query: 63  QLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML-V 121
            L++  +    L LG+ +H  L +SG + D      L+++Y K    D A++ FD M  V
Sbjct: 266 NLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDV 325

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R    W +L+  Y+     +  LGI   M       +  T   IL+AC+ L     G   
Sbjct: 326 RDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLT 385

Query: 182 HAFAIKSGFENNVFVG------TSLISMYFHSGCFREAENVF---RGLAYKDVRCVNFMI 232
           H+  ++ G  +   V       TS+I+MY   G   +A+  F   R     DV   + M+
Sbjct: 386 HSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMV 445

Query: 233 LEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEG-------KQLHGL 285
             Y++ G SE A   F  +     +P+  +F + I+ C  +  V E        +  HG+
Sbjct: 446 AAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGI 505

Query: 286 A 286
           A
Sbjct: 506 A 506


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 191/672 (28%), Positives = 342/672 (50%), Gaps = 6/672 (0%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G+ + G  +HA ++K G + +      L++LY K +      KL   +     ++WT++I
Sbjct: 131 GEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMI 190

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE-DRIFGEQIHAFAIKSGF 190
              ++   +   L +   M  +    NE T   +L   S L   + +G+ +H+  I  G 
Sbjct: 191 SSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGV 250

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E N+ + T++I MY       +A  V +     DV     +I  + +  +   A +  V 
Sbjct: 251 EMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVD 310

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK-HG 309
           +  S   PN++T+ ++++     L +E G+Q H   +  G+  +I VGNA+V MY K   
Sbjct: 311 MELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSH 370

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
            +    + F  I+  N+ISWT+LI+G+   G   +++  F E    G+  +S  L+T++ 
Sbjct: 371 TTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILG 430

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
            CS   ++    +LHG+ IK     D+ +G ALVD YA GG    A  ++   + +    
Sbjct: 431 ACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIIT 490

Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
           +  + +   ++   D E  + + +      ++ D  + +  +S +A    +  G+ LH Y
Sbjct: 491 YTTLAARLNQQ--GDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCY 548

Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
           S K+G+     V N+L+  Y+KCGS+  A+++FK I++ D VSWN ++S  A +GL   A
Sbjct: 549 SFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDA 608

Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
           L  F++M+  G  PD ++ L ++ AC    L   G+  F  +E+ Y + P L+H+ C+VD
Sbjct: 609 LSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVD 668

Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
           LLGR GRL EAM +I + PF    ++++TL++   L  N       ++R L+L+P D   
Sbjct: 669 LLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAI 728

Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEI 729
           ++L++++Y   G+ D   K R  M +  L +     W+E+ SK++ F  S ++   ++EI
Sbjct: 729 YLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLF--SAREKIGNDEI 786

Query: 730 YSKLDLLNDEMK 741
             KL+ L  E+K
Sbjct: 787 NEKLESLITEIK 798



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 260/516 (50%), Gaps = 4/516 (0%)

Query: 71  SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
           S  LK G  VH+ ++K G Q+D + +NNL+ LYAK   +  A+ LFD M  R  ++WT+L
Sbjct: 29  SQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTL 88

Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
           +  +  +  +   L +   M  S +  NE T S  L +CS L +  FG +IHA  +K G 
Sbjct: 89  LSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGL 148

Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
           E N  +GT+L+ +Y    C  E   +   +   DV     MI    +  +   A  ++V 
Sbjct: 149 ELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVK 208

Query: 251 LLSSDFEPNDYTFTNVISV-CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           ++ +   PN++TF  ++ +  +  LG   GK LH   + FGV   + +  AI+ MY K  
Sbjct: 209 MIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCR 268

Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
             E+A ++     + ++  WT++ISG+V++    +A+N  ++    GI  ++   A++++
Sbjct: 269 RMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLN 328

Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM-LLDGFSCKYTA 428
             S   +LELG Q H   I  G   D+ +G ALVD+Y K     +  +    G +     
Sbjct: 329 ASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVI 388

Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
            + ++++GF E     EE+ + LF++ + AG++P+  T S +L   +    +++ + LH 
Sbjct: 389 SWTSLIAGFAEH--GFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHG 446

Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
           Y IKT    D+ VGNAL+  YA  G  D A+ +   ++ RDI+++  + +     G  + 
Sbjct: 447 YIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEM 506

Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGG 584
           AL +   M  +    D+ S+   + A    G+ E G
Sbjct: 507 ALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETG 542



 Score = 40.0 bits (92), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 50/107 (46%)

Query: 64  LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
            +  + G G ++ G+ +H +  KSG +     +N+L++ Y+K   +  A ++F  +    
Sbjct: 529 FISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPD 588

Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
            ++W  LI G   +G     L    DM  +  K +  T   ++ ACS
Sbjct: 589 RVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACS 635


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 195/689 (28%), Positives = 346/689 (50%), Gaps = 8/689 (1%)

Query: 58  FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLF 116
           F D    V +   SGD+   + + A +  S     D    N ++  Y K   +  A+ +F
Sbjct: 80  FVDPAAYVSLLKQSGDVTALKTIQAHISHSKRFAGDRLLLNCVVEAYGKCGCVKDARLVF 139

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
             +   +  +WT L+  Y  +G +++VL +   M       N  T + ++ A S L +  
Sbjct: 140 SSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWD 199

Query: 177 FGEQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
              +IHA A  +     +V + T+LI MY   G    AE VF     KD+ C N MI  Y
Sbjct: 200 EARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAY 259

Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
            + G +  A   F  +  S  +PN  T+  +   C  N    + +  H   +   +  ++
Sbjct: 260 IQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDV 319

Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
            V  A+V+MY + G  E+A R+FD +  +N+++W  +I+GY + G+  +A+  ++     
Sbjct: 320 VVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAA 379

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
           G+  D      V++ CS+  +L  G  +H   +  GY S + + +AL+ +Y+  G L  A
Sbjct: 380 GVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDA 439

Query: 416 RMLLDGFSCKYTAEFNAI-LSGFMEKIADDEE--DVMVLFSQQRLAGMEPDPVTFSRLLS 472
              +D F    T   + I  +  +  +  + E    + LF +  L G+  + VTF   + 
Sbjct: 440 ---VDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTID 496

Query: 473 LSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS 532
             +S   LV G ++    I TG+  DV++G +LI +Y KCG +D A ++F  +S ++IV+
Sbjct: 497 ACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVT 556

Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
           WN +L+A + +G    +  L +EM  +G  P+++++L +L  C ++GL    +  F  + 
Sbjct: 557 WNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMV 616

Query: 593 QIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFS 652
             + L P  EH+ C+VDLLGR+G+L E    I+S PFS   +LW +L+    + ++ +  
Sbjct: 617 YGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERG 676

Query: 653 ILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
           + A++R+L L+PK+A  ++L+SNM+A  GMLD    +     +  + KE   S+IE++  
Sbjct: 677 LRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVNGV 736

Query: 713 LHHFVASGKDHPESEEIYSKLDLLNDEMK 741
           +H F      H   E+I ++L   ++EM+
Sbjct: 737 VHEFGVRAGLHRLGEKIGAQLREWSEEME 765


>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 162/502 (32%), Positives = 281/502 (55%), Gaps = 5/502 (0%)

Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
           +A  +F  ++S    P+++TF      C     +      H L  K  +  +    ++++
Sbjct: 105 LALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLI 164

Query: 303 TMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEF-LDLGICCDS 361
           T Y + G+   A ++FD I  R+ +SW ++I+GY ++G   +A+  F E     G   D 
Sbjct: 165 TAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDE 224

Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
             L +++  C    +LELG  + GF ++ G   +  +G+AL+ +YAK G+L+SAR + DG
Sbjct: 225 MSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDG 284

Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            + +    +NA++SG+ +    DE   ++LF   +   +  + +T + +LS  A+   L 
Sbjct: 285 MAARDVITWNAVISGYAQNGMADE--AILLFHGMKEDCVTANKITLTAVLSACATIGALD 342

Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
            G+ +  Y+ + G+  D+ V  ALI MYAK GS+D A ++FK +  ++  SWNAM+SA A
Sbjct: 343 LGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALA 402

Query: 542 LHGLGKGALLLFEEMKREGFA--PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
            HG  K AL LF+ M  EG    P+DI+ +G+L AC+++GL + G  LF+ +  ++GL P
Sbjct: 403 AHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVP 462

Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
            +EH++CMVDLL RAG L EA +LI   P     +    L+   +   N        + +
Sbjct: 463 KIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMI 522

Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
           L+++P ++G++I+ S +YA   M +++A++R  M    ++K  GCSWIE+++ LH F A 
Sbjct: 523 LEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAG 582

Query: 720 GKDHPESEEIYSKLDLLNDEMK 741
                +S ++ + +DLL +E+K
Sbjct: 583 DGLCLDSIDLSNIIDLLYEELK 604



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 219/507 (43%), Gaps = 61/507 (12%)

Query: 79  AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
           A H+ L K    +D   A++LI  YA+   +  A+K+FD +  R +++W S+I GY   G
Sbjct: 143 AAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAG 202

Query: 139 DYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVG 197
                + +  +M R +  + +E +   +L AC  L D   G  +  F ++ G   N ++G
Sbjct: 203 CAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIG 262

Query: 198 TSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
           ++LISMY   G    A  +F G+A +DV   N +I  Y + G ++ A  +F  +      
Sbjct: 263 SALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVT 322

Query: 258 PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
            N  T T V+S C     ++ GKQ+   A + G   +I V  A++ MY K G  + A+R+
Sbjct: 323 ANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRV 382

Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV--IDGCSVCS 375
           F  + ++N  SW A+IS     G   +A++ F    D G     + +  V  +  C    
Sbjct: 383 FKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAG 442

Query: 376 NLELGLQLHG-FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
            ++ G +L    +   G +  +   + +VD+ A+ G L  A  L+               
Sbjct: 443 LVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLI--------------- 487

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
                                R    +PD VT   LL    S+  +  G  +    ++  
Sbjct: 488 ---------------------RKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVD 526

Query: 495 YAADVIVGNALIT--MYAKCGSIDGAFQIF-----KGISDRDIVSW----NAMLSAYALH 543
            +     GN +I+  +YA     + + ++      KGI+     SW    N +   +A  
Sbjct: 527 PSNS---GNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGD 583

Query: 544 GLGKGAL-------LLFEEMKREGFAP 563
           GL   ++       LL+EE+KREG+ P
Sbjct: 584 GLCLDSIDLSNIIDLLYEELKREGYVP 610



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 139/258 (53%), Gaps = 7/258 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           GDL+LG+ V  F+++ G   +++  + LI++YAK   L+ A+++FDGM  R  ITW ++I
Sbjct: 238 GDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVI 297

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            GY  +G  +  + +   M       N+ T + +L AC+ +     G+QI  +A + GF+
Sbjct: 298 SGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQ 357

Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
           +++FV T+LI MY  SG    A+ VF+ +  K+    N MI      G+++ A  +F H+
Sbjct: 358 HDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHM 417

Query: 252 LSSD----FEPNDYTFTNVISVCYENLGVEEGKQLHG-LAVKFGVVREISVGNAIVTMYG 306
             SD      PND TF  ++S C     V+EG +L   ++  FG+V +I   + +V +  
Sbjct: 418 --SDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLA 475

Query: 307 KHGMSEEAERMFDAISER 324
           + G   EA  +   + E+
Sbjct: 476 RAGHLYEAWDLIRKMPEK 493


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 162/567 (28%), Positives = 306/567 (53%), Gaps = 5/567 (0%)

Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYF--HSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
           +Q HA  +++   +N    + LIS     HSG    A  +F  +   D    N MI  Y 
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
           ++     A  ++  ++      ++YT+  V++ C     V+ G++ H   +K G   ++ 
Sbjct: 88  RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL- 355
           V NA++  Y   G    A  +FD  + R++++W  +I+ ++  G   KA +   E   L 
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207

Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
            +  D   + +++  C+   NLE G  LH ++ + G   ++R+  A++D+Y K  D++SA
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESA 267

Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
           + + +    K    + ++LSG  +  +   ++ + LF + +L  +E D +T   +LS  A
Sbjct: 268 QEVFNRIREKDVLSWTSMLSGLAK--SGYFQEALALFQKMQLNKIELDEITLVGVLSACA 325

Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
               L +G+ +H    K     D+++  AL+ MYAKCGSID A Q+F+ +  R++ +WNA
Sbjct: 326 QTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNA 385

Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
           ++   A+HG G+ A+ LF++M+ +   PDD++ + +L AC ++GL + G+ +F  ++  +
Sbjct: 386 LIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKF 445

Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
            + P +EH+ C+VDLL RA ++ +A+  I + P   + +LW TL+   +   +   +   
Sbjct: 446 QIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKI 505

Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
            +R+++LEP   G ++++SN+YAG    D A K+R  M +  + K  GCSWIE++  +H 
Sbjct: 506 GRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQ 565

Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKL 742
           FVA  + H ++E+IY+ ++ +   + L
Sbjct: 566 FVAGDRSHLQTEQIYAMIEEMTRRVNL 592



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 195/407 (47%), Gaps = 6/407 (1%)

Query: 78  QAVHAFLLKSGSQNDTFEANNLINLYAKFNR--LDVAQKLFDGMLVRSAITWTSLIKGYL 135
           +  HA LL++   ++   ++ LI+  A  +   L+ A+KLF  M         ++I+GY 
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
              +    + +   M       + +T   +L AC+ L     G + H   +K+GF +++F
Sbjct: 88  RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147

Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
           V  +LI  Y + G F  A +VF     +DV   N MI  +   G SE AF +   +   D
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207

Query: 256 -FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
              P++ T  +++  C +   +E GK LH  + + G+   + V NAI+ MY K    E A
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESA 267

Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
           + +F+ I E++++SWT+++SG  +SG+  +A+  F +     I  D   L  V+  C+  
Sbjct: 268 QEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQT 327

Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
             L+ G  +H    K     D+ L TALVD+YAK G +  A  +      +    +NA++
Sbjct: 328 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALI 387

Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
            G    +    ED + LF Q     + PD VTF  LL  + S A LV
Sbjct: 388 GGL--AMHGHGEDAISLFDQMEHDKLMPDDVTFIALLC-ACSHAGLV 431



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 178/379 (46%), Gaps = 4/379 (1%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           +P ++      G +KLG+  H  +LK+G  +D F  N LI  Y        A  +FD   
Sbjct: 114 YPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDEST 173

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGE 179
           VR  +TW  +I  +L+ G  E    +  +M + +  + +E T   ++ AC+ L +   G+
Sbjct: 174 VRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGK 233

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
            +H+++ + G + N+ V  +++ MY        A+ VF  +  KDV     M+    K+G
Sbjct: 234 FLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSG 293

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
             + A  +F  +  +  E ++ T   V+S C +   +++GK +H L  KF +  ++ +  
Sbjct: 294 YFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLET 353

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
           A+V MY K G  + A ++F  +  RN+ +W ALI G    GHG  AI+ F +     +  
Sbjct: 354 ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMP 413

Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT--ALVDIYAKGGDLKSARM 417
           D      ++  CS    ++ GL +   A+K+ +  + R+     +VD+  +   +  A  
Sbjct: 414 DDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEHYGCVVDLLCRARKVDDALA 472

Query: 418 LLDGFSCKYTAEFNAILSG 436
            ++    K  +   A L G
Sbjct: 473 FIENMPIKANSVLWATLLG 491


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 153/473 (32%), Positives = 272/473 (57%), Gaps = 3/473 (0%)

Query: 261 YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDA 320
           + +   I+ C E   + EG+Q+H   VK      + +   ++ +Y + G  ++A  + D 
Sbjct: 42  HDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDG 101

Query: 321 ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELG 380
           + ERN++SWTA+ISGY +SG   +A+  F+  L  G   +   LATV+  C V  +++  
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161

Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
            Q+H   +K  + S + +G++L+D+Y K G+++ AR + D    + T    AI+SG+ + 
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221

Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
             DDE   + LF Q   +GM+ + VTF+ LL+  +  A L  G+ +H   ++      ++
Sbjct: 222 GLDDE--ALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIV 279

Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
           + N+LI MY+KCG +  + ++F  +  R  +SWNAML  Y  HG+G+  + LF  M  E 
Sbjct: 280 LQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE- 338

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             PD +++L VL  C + GL + G+ +F+ I +       + H+ C++DLLGR+G+L +A
Sbjct: 339 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKA 398

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
           ++LI   PF  +P +W +L+   ++  N     + +++LLD+EP +AG+++++SN+YA  
Sbjct: 399 LDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAA 458

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
           GM  +  +VR  M +  ++KE   SWI +D  +H F +S + HP  ++I +K+
Sbjct: 459 GMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKI 511



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 221/441 (50%), Gaps = 9/441 (2%)

Query: 25  KKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFL 84
           ++V +++      S VA   + SS++       F+D+   +   +    L  G+ VHA +
Sbjct: 8   RRVAVSSLVRWDMSVVAARHAASSLAVPGADARFHDYDAAITACVERQALGEGRQVHAHM 67

Query: 85  LKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVL 144
           +K+  +   + A  LI LY +   LD A+ + DGM  R+ ++WT++I GY   G +   L
Sbjct: 68  VKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEAL 127

Query: 145 GIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY 204
            +   M R+  K NE T + +L +C + +     EQ+H+  +K+ FE+++FVG+SL+ MY
Sbjct: 128 ELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMY 187

Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
             SG  +EA  VF  L  +D      +I  Y + G  + A  +F  L SS  + N  TFT
Sbjct: 188 GKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFT 247

Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
            +++       +  GKQ+HGL ++  +   I + N+++ MY K G    + R+FD + +R
Sbjct: 248 TLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQR 307

Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
           + ISW A++ GY R G G + +  F    +  +  DS  L  V+ GCS    ++ GL + 
Sbjct: 308 SAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTLLAVLSGCSHGGLVDEGLDIF 366

Query: 385 GFAIKHGYLSDVRLGT--ALVDIYAKGGDLKSARMLLDGFSCKYT-AEFNAILSGFMEKI 441
              +K    + + +G    ++D+  + G L+ A  L++    + T A + ++L      I
Sbjct: 367 DLIVKEQN-AVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHI 425

Query: 442 ADDEEDVMVLFSQQRLAGMEP 462
                +V+     Q+L  MEP
Sbjct: 426 NVSVGEVVA----QKLLDMEP 442


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 190/617 (30%), Positives = 304/617 (49%), Gaps = 72/617 (11%)

Query: 197 GTSLISMYFHSGCFREAENVFRGL--AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
            TSL++ Y  +     A + F  +  A +D    N +I  Y +A  +  A  VF  LL+S
Sbjct: 91  ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 255 -DFEPNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
               P+DY+FT ++S      N+ V    QLH   +K G    +SV NA+V +Y K    
Sbjct: 151 GSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESP 210

Query: 312 E---EAERMFDAISERNLISWTALISGYVRSG---------------------------- 340
           E   +A ++ D +  ++ ++WT ++ GYVR G                            
Sbjct: 211 EATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYV 270

Query: 341 HGGKAINGFLEFLDL---GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIK--HGYLSD 395
           H G A+  F  F  +    +  D     +V+  C+       G  +HG  I+    ++ +
Sbjct: 271 HSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPE 330

Query: 396 VRL--GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE-------- 445
             L    ALV  Y+K G++  AR + D  + K    +N ILSG++E    D+        
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 446 ---------------------EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
                                ED + LF++ R   ++P   T++  ++       L  G+
Sbjct: 391 PYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGK 450

Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
            LH + ++ G+      GNALITMYA+CG++  A  +F  + + D VSWNAM+SA   HG
Sbjct: 451 QLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHG 510

Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF 604
            G+ AL LF+ M  EG  PD IS L VL AC +SGL + G   F  +++ +G+ P  +H+
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY 570

Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP 664
             ++DLLGRAGR+ EA +LI + PF  +P +W  ++S  +   + +    A+ +L  + P
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTP 630

Query: 665 KDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHP 724
           +  G++IL+SN Y+  G   +AA+VR  M D  + KE GCSWIE  +K+H F+     HP
Sbjct: 631 QHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHP 690

Query: 725 ESEEIYSKLDLLNDEMK 741
           E+ E+Y  L+++  +M+
Sbjct: 691 EAHEVYKFLEMVGAKMR 707



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 218/516 (42%), Gaps = 63/516 (12%)

Query: 75  KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI-----TWTS 129
           +L  AV  F     ++ DT   N +I+ YA+ +    A  +F  +L   ++     ++T+
Sbjct: 103 RLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTA 162

Query: 130 LIK--GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILE---ACSLLEDRIFGEQIHAF 184
           L+   G+L +        + C + +S        C+ ++     C   E      ++   
Sbjct: 163 LLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKV--- 219

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
            +      +    T+++  Y   G    A +VF  +  K     N MI  Y  +G +  A
Sbjct: 220 -LDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEA 278

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGV-EEGKQLHGLAVK----FGVVREISVGN 299
           F +F  ++      +++TFT+V+S C  N+G+   GK +HG  ++    F     + V N
Sbjct: 279 FELFRRMVLERVPLDEFTFTSVLSAC-ANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNN 337

Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE-------- 351
           A+VT Y K G    A R+FD ++ ++++SW  ++SGYV S    KA+  F E        
Sbjct: 338 ALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELS 397

Query: 352 -------FLDLGIC-----------------CDSSCLATVIDGCSVCSNLELGLQLHGFA 387
                  ++  G                   CD +  A  I  C     L+ G QLHG  
Sbjct: 398 WMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYT-YAGAIAACGELGALKHGKQLHGHI 456

Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
           ++ G+      G AL+ +YA+ G +K A ++        +  +NA++S   +       +
Sbjct: 457 VQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQH--GHGRE 514

Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG----N 503
            + LF +    G+ PD ++F  +L+ + + + LV     +  S+K  +   +I G     
Sbjct: 515 ALELFDRMVAEGIYPDRISFLTVLT-ACNHSGLVDEGFRYFESMKRDFG--IIPGEDHYT 571

Query: 504 ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLS 538
            LI +  + G I  A  + K +      S W A+LS
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 2/252 (0%)

Query: 91  NDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDM 150
            D    N +++ Y + + LD A ++F+ M  ++ ++W  ++ GY+  G  E  L +   M
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKM 421

Query: 151 YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCF 210
                K  ++T +  + AC  L     G+Q+H   ++ GFE +   G +LI+MY   G  
Sbjct: 422 RSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAV 481

Query: 211 REAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
           +EA  +F  +   D    N MI    + G    A  +F  +++    P+  +F  V++ C
Sbjct: 482 KEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTAC 541

Query: 271 YENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-ERNLIS 328
             +  V+EG +    +   FG++        ++ + G+ G   EA  +   +  E     
Sbjct: 542 NHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI 601

Query: 329 WTALISGYVRSG 340
           W A++SG   SG
Sbjct: 602 WEAILSGCRTSG 613


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 189/676 (27%), Positives = 322/676 (47%), Gaps = 85/676 (12%)

Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
           R    + + I  +   G+ E+ + + C   +SE      T S +L+ C+  +    G+++
Sbjct: 64  RQVTDYNAKILHFCQLGNLENAMELVCMCQKSE--LETKTYSSVLQLCAGSKSLTDGKKV 121

Query: 182 HAFAIKSGFENNVFV----GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
           H+  IKS   NNV V    G  L+S+Y   G  +E   VF  +  K+V   NFM+ EY K
Sbjct: 122 HSI-IKS---NNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177

Query: 238 AGE---------------------------------------------------SEMAFH 246
            G+                                                   +E    
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLE 237

Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
           ++  ++    + +  T  +V+  C  +  +  GK +H LA+K    R I+  N ++ MY 
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYS 297

Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
           K G  + A R+F+ + ERN++SWT++I+GY R G    AI    +    G+  D     +
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTS 357

Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
           ++  C+   +L+ G  +H +   +   S++ +  AL+D+Y K G +  A  +      K 
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD 417

Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
              +N ++                         ++PD  T + +L   AS + L RG+ +
Sbjct: 418 IISWNTMI-----------------------GELKPDSRTMACILPACASLSALERGKEI 454

Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
           H Y ++ GY++D  V NAL+ +Y KCG +  A  +F  I  +D+VSW  M+S Y +HG G
Sbjct: 455 HGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYG 514

Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
             A+  F EM+  G  PD++S + +L AC +SGL E G   F  ++  + + P LEH+AC
Sbjct: 515 NEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYAC 574

Query: 607 MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKD 666
           MVDLL R G LS+A   I + P +    +W  L+   ++  + + +   ++R+ +LEP++
Sbjct: 575 MVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPEN 634

Query: 667 AGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVA-SGKDHPE 725
            G ++L++N+YA     +E  ++R  +    L K  GCSWIEI  K++ FV+ +   HP 
Sbjct: 635 TGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPH 694

Query: 726 SEEIYSKLDLLNDEMK 741
           S++I S L  +  +MK
Sbjct: 695 SKKIESLLKKMRRKMK 710



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 202/419 (48%), Gaps = 32/419 (7%)

Query: 60  DWPQLVKISIG---SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
           D   ++ + +G   SG L LG+AVH+  +KS  +     +N L+++Y+K   LD A ++F
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVF 309

Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
           + M  R+ ++WTS+I GY  DG  +  + +   M +   K +    + IL AC+      
Sbjct: 310 EKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLD 369

Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
            G+ +H +   +  E+N+FV  +L+ MY   G    A +VF  +  KD+   N MI E  
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGE-- 427

Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
                               +P+  T   ++  C     +E GK++HG  ++ G   +  
Sbjct: 428 -------------------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRH 468

Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
           V NA+V +Y K G+   A  +FD I  ++L+SWT +ISGY   G+G +AI  F E  D G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAG 528

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLG--TALVDIYAKGGDLKS 414
           I  D     +++  CS    LE G +   + +K+ +  + +L     +VD+ ++ G+L  
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587

Query: 415 ARMLLDGFSCKYTAE-FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
           A   ++       A  + A+L G   +I  D E  +     +R+  +EP+   +  LL+
Sbjct: 588 AYEFIETLPIAPDATIWGALLCGC--RIYHDIE--LAEKVAERVFELEPENTGYYVLLA 642



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 133/596 (22%), Positives = 242/596 (40%), Gaps = 91/596 (15%)

Query: 7   ANLLQPPFKSQQSLPPLKKKVPINTFS---PNPKSQVAYLCSISSVS--------CSERT 55
           A    P F S   LP      P  T      +  +++ + C + ++         C +  
Sbjct: 39  ATFFSPIFSS--CLPIRISATPTRTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSE 96

Query: 56  LLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYA----------- 104
           L    +  ++++  GS  L  G+ VH+ +  +    D      L++LYA           
Sbjct: 97  LETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRV 156

Query: 105 ----------------------------------------KFNRLDVAQKLFDGMLVRSA 124
                                                   +  R + A +LFD +  R  
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDV 216

Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
           I+W S+I GY+ +G  E  L I   M       +  T   +L  C+       G+ +H+ 
Sbjct: 217 ISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276

Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
           AIKS FE  +    +L+ MY   G    A  VF  +  ++V     MI  Y + G S+ A
Sbjct: 277 AIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336

Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
             +   +     + +    T+++  C  +  ++ GK +H       +   + V NA++ M
Sbjct: 337 IRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDM 396

Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
           Y K G  + A  +F  +  +++ISW  +I G ++                     DS  +
Sbjct: 397 YTKCGSMDGANSVFSTMVVKDIISWNTMI-GELKP--------------------DSRTM 435

Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
           A ++  C+  S LE G ++HG+ +++GY SD  +  ALVD+Y K G L  AR+L D    
Sbjct: 436 ACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495

Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
           K    +  ++SG+      +E   +  F++ R AG+EPD V+F  +L   +    L +G 
Sbjct: 496 KDLVSWTVMISGYGMHGYGNE--AIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553

Query: 485 SLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAML 537
               Y +K  +  +  + +   ++ + ++ G++  A++  + +    D   W A+L
Sbjct: 554 RFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 167/495 (33%), Positives = 275/495 (55%), Gaps = 9/495 (1%)

Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
           T++ +I  C     V++ + +H      G   +  + N ++ MY K G+ +EA  +FD +
Sbjct: 18  TYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEM 77

Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
            +RN++SWT +IS Y  S    KA++  +  L  G+  +    ++V+  C    NL    
Sbjct: 78  PDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR--- 134

Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKI 441
           QLHG  +K G  SDV + +AL+D Y+K G+   A  + +         +N+I+ GF +  
Sbjct: 135 QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN- 193

Query: 442 ADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
             D ++ + L+ + + A    D  T + +L      A L  GR +H + +K  Y  D+I+
Sbjct: 194 -SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLIL 250

Query: 502 GNALITMYAKCGSIDGAFQIF-KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
            NAL+ MY KCGS++ A  +F + ++++D++SW+ M++  A +G    AL LFE MK +G
Sbjct: 251 NNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKG 310

Query: 561 FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
             P+ I+ILGVL AC ++GL   G   F  +++ +G+ P  EH+ C++DLLGRAG+L EA
Sbjct: 311 PKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEA 370

Query: 621 MNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQ 680
           + LI+        + WR L+   ++  N   +I A+K +L L+P DAG++IL+SN+YA  
Sbjct: 371 VKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANS 430

Query: 681 GMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL-DLLNDE 739
              ++ A+VR  M    + K+ GCSWIE+  ++H F+     HP  EEI  +L  L+   
Sbjct: 431 QKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRL 490

Query: 740 MKLKVKDSSAFELQD 754
           M+L     + F LQD
Sbjct: 491 MRLGYVPDTNFVLQD 505



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 154/291 (52%), Gaps = 8/291 (2%)

Query: 61  WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
           + +L+K  +  G ++  + VH  +  +G +  TF  N LIN+Y KF  LD A+ LFD M 
Sbjct: 19  YSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP 78

Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS-LLEDRIFGE 179
            R+ ++WT++I  Y +       L     M R   + N +T S +L AC  LL  R    
Sbjct: 79  DRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR---- 134

Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
           Q+H   +K G E++VFV ++LI  Y   G   +A NVF  +   D+   N +I  + +  
Sbjct: 135 QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNS 194

Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
           + +   H++  +  +DF  +  T T+V+  C     +E G+Q+H   +K+   +++ + N
Sbjct: 195 DGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNN 252

Query: 300 AIVTMYGKHGMSEEAERMFD-AISERNLISWTALISGYVRSGHGGKAINGF 349
           A++ MY K G  E+A  +F   ++E+++ISW+ +I+G  ++G    A+  F
Sbjct: 253 ALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLF 303



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 16/289 (5%)

Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
           +  D+   + +I  C V   ++    +H     +GY     L   L+++Y K G L  AR
Sbjct: 12  LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEAR 71

Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEE-DVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
            L D    +    +  ++S +     + +  D ++L  ++   G+ P+  T+S +L    
Sbjct: 72  NLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLRE---GVRPNMYTYSSVL---- 124

Query: 476 SQAC--LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
            +AC  L+  R LH   +K G  +DV V +ALI  Y+K G    A  +F  +   D+V W
Sbjct: 125 -RACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183

Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
           N+++  +A +  G   L L++ MKR  F  D  ++  VL+AC    L E G  +   + +
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK 243

Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLL-WRTLVS 641
            Y    IL +   ++D+  + G L +A NL+ +   +E  ++ W T+++
Sbjct: 244 -YDQDLILNN--ALLDMYCKCGSLEDA-NLLFTRMMTEKDVISWSTMIA 288



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 6/265 (2%)

Query: 72  GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
           G L L Q +H  +LK G ++D F  + LI+ Y+K      A  +F+ M+    + W S+I
Sbjct: 129 GLLNLRQ-LHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSII 187

Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
            G+  + D +  L +   M R++   ++ T + +L AC+ L     G Q+H   +K  ++
Sbjct: 188 GGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YD 245

Query: 192 NNVFVGTSLISMYFHSGCFREAENVF-RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
            ++ +  +L+ MY   G   +A  +F R +  KDV   + MI    + G S  A  +F  
Sbjct: 246 QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEA 305

Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
           + S   +PN  T   V+  C     V +G      +   FG+         I+ + G+ G
Sbjct: 306 MKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAG 365

Query: 310 MSEEAERMFDAIS-ERNLISWTALI 333
             +EA ++   ++ E + ++W  L+
Sbjct: 366 KLDEAVKLIHEMNHEPDAVTWRILL 390


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.137    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,534,379,629
Number of Sequences: 23463169
Number of extensions: 482901086
Number of successful extensions: 1229695
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7178
Number of HSP's successfully gapped in prelim test: 3444
Number of HSP's that attempted gapping in prelim test: 1053457
Number of HSP's gapped (non-prelim): 63749
length of query: 754
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 603
effective length of database: 8,816,256,848
effective search space: 5316202879344
effective search space used: 5316202879344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)