BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004425
(754 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/691 (33%), Positives = 379/691 (54%), Gaps = 11/691 (1%)
Query: 73 DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
+L G+AVH ++++G+ AN L+N YAK +L A +F+ ++ + ++W SLI
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 133 GYLDDGDYES---VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
GY +G S V+ + +M + N +T + I +A S L+ G Q HA +K
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
+++V TSL+ MY +G + VF + ++ + M+ Y G E A VF
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 250 HLLSSDFE--PNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
L E +DY FT V+S + V G+Q+H + +K G++ +++ NA+VTMY K
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268
Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
EA +MFD+ +RN I+W+A+++GY ++G +A+ F GI + V
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
++ CS LE G QLH F +K G+ + TALVD+YAK G L AR D +
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388
Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
A + +++SG+++ D E+ ++L+ + + AG+ P+ T + +L +S A L G+ +H
Sbjct: 389 ALWTSLISGYVQN--SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
++IK G+ +V +G+AL TMY+KCGS++ +F+ ++D+VSWNAM+S + +G G
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506
Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACM 607
AL LFEEM EG PDD++ + ++ AC + G E G FN + GL P ++H+ACM
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Query: 608 VDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
VDLL RAG+L EA I S+ LWR L+S K + + A ++L+ L +++
Sbjct: 567 VDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRES 626
Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
+++ +S +Y G + + +V M +SKE GCSWIE+ ++ H FV HP E
Sbjct: 627 STYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIE 686
Query: 728 EIYSKLDLLNDEMK----LKVKDSSAFELQD 754
E + L++ +M + V DSS E ++
Sbjct: 687 ETKDLVCLVSRQMIEEGFVTVLDSSFVEEEE 717
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 192/400 (48%), Gaps = 19/400 (4%)
Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
++ P+ T ++ + + G+ +HG ++ G I N +V Y K G
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 312 EEAERMFDAISERNLISWTALISGYVRSG---HGGKAINGFLEFLDLGICCDSSCLATVI 368
+A +F+AI ++++SW +LI+GY ++G + F E I ++ LA +
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
S + +G Q H +K D+ + T+LV +Y K G ++ + + T
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 429 EFNAILSGFMEKIADDEE-DVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
++ ++SG+ + +E V LF +++ G + D V F+ +LS A+ + GR +H
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIH 244
Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
+IK G V + NAL+TMY+KC S++ A ++F DR+ ++W+AM++ Y+ +G
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL 304
Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLRPIL 601
A+ LF M G P + +I+GVL AC IC E +Q++ G L
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNAC-------SDICYLEEGKQLHSFLLKLGFERHL 357
Query: 602 EHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
+VD+ +AG L++A + LW +L+S
Sbjct: 358 FATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLIS 396
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/694 (30%), Positives = 381/694 (54%), Gaps = 32/694 (4%)
Query: 73 DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
D LG +H +++ G D A+ L+++YAK R + ++F G+ +++++W+++I
Sbjct: 195 DTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIA 254
Query: 133 GYLDDGDYESVLGIACDMYRSEEKFN----EHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
G + + ++L +A ++ +K N + + +L +C+ L + G Q+HA A+KS
Sbjct: 255 GCVQN----NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 310
Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
F + V T+ + MY ++A+ +F + + N MI Y++ A +F
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 370
Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
L+SS ++ + + V C G+ EG Q++GLA+K + ++ V NA + MYGK
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKC 430
Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
EA R+FD + R+ +SW A+I+ + ++G G + + F+ L I D +++
Sbjct: 431 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML---------- 418
C+ S L G+++H +K G S+ +G +L+D+Y+K G ++ A +
Sbjct: 491 KACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 419 ------LDGFSCKYTAE----FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
L+ K E +N+I+SG++ K + ED +LF++ G+ PD T++
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMK--EQSEDAQMLFTRMMEMGITPDKFTYA 607
Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
+L A+ A G+ +HA IK +DV + + L+ MY+KCG + + +F+ R
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667
Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
D V+WNAM+ YA HG G+ A+ LFE M E P+ ++ + +L+AC + GL + G+ F
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYF 727
Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
+++ YGL P L H++ MVD+LG++G++ A+ LI PF ++WRTL+ V + N
Sbjct: 728 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 787
Query: 649 S-KFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
+ + + A+ LL L+P+D+ ++ L+SN+YA GM ++ + +R M +L KE GCSW+
Sbjct: 788 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
E+ +LH F+ K HP EEIY +L L+ EMK
Sbjct: 848 ELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 178/703 (25%), Positives = 312/703 (44%), Gaps = 78/703 (11%)
Query: 42 YLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTF------- 94
+L ++SVS + + +F + + G L+LG+ HA ++ SG + TF
Sbjct: 39 FLNQVNSVSTTNFSFVFKECAK-------QGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 95 ------------------------EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
N +IN Y+K N + A F+ M VR ++W S+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
+ GYL +G+ + + DM R +F+ T ++IL+ CS LED G QIH ++ G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
+ +V ++L+ MY F E+ VF+G+ K+ + +I + +A F
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
+ + + + +V+ C + G QLH A+K + V A + MY K
Sbjct: 272 MQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDN 331
Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
++A+ +FD N S+ A+I+GY + HG KA+ F + G+ D L+ V
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
C++ L GLQ++G AIK DV + A +D+Y K L A + D + +
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
NAI++ E+ E + + S R + +EPD TF +L + + L G +H+
Sbjct: 452 NAIIAAH-EQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILK-ACTGGSLGYGMEIHSSI 508
Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRD--------------------I 530
+K+G A++ VG +LI MY+KCG I+ A +I R
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC 568
Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
VSWN+++S Y + + A +LF M G PD + VL C + L+ G+
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC--ANLASAGLG---- 622
Query: 591 IEQIYG------LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSK 644
+QI+ L+ + + +VD+ + G L ++ L+ + W ++
Sbjct: 623 -KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYA 680
Query: 645 LMANSKFSILASKRLL--DLEPKDAGSFILVSNMYAGQGMLDE 685
+ +I +R++ +++P +FI + A G++D+
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHV-TFISILRACAHMGLIDK 722
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/704 (32%), Positives = 378/704 (53%), Gaps = 15/704 (2%)
Query: 49 VSCSERTLLFNDWPQLVKISI--------GSGDLKLGQAVHAFLLKSGSQNDTFEANNLI 100
V C R L+F P +SI G+ + G+ +H F+L++ D+F LI
Sbjct: 153 VGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALI 212
Query: 101 NLYAKFNRLDVAQKLFDGMLVRS-AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNE 159
++Y KF A ++F + +S + W +I G+ G ES L + + K
Sbjct: 213 DMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVS 272
Query: 160 HTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRG 219
+ + L ACS E+ FG QIH +K G N+ +V TSL+SMY G EAE VF
Sbjct: 273 TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSC 332
Query: 220 LAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE- 278
+ K + N M+ Y + A +F + P+ +T +NVIS C LG+
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC-SVLGLYNY 391
Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
GK +H K + ++ +A++T+Y K G +A +F ++ E+++++W +LISG +
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 339 SGHGGKAINGF--LEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
+G +A+ F ++ D + DS + +V + C+ L GLQ+HG IK G + +V
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511
Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
+G++L+D+Y+K G + A + S + +N+++S + + E + LF+
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN--NLPELSIDLFNLML 569
Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
G+ PD V+ + +L +S A L++G+SLH Y+++ G +D + NALI MY KCG
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI 576
A IFK + + +++WN M+ Y HG AL LF+EMK+ G +PDD++ L ++ AC
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 577 YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLW 636
+SG E G +F ++Q YG+ P +EH+A MVDLLGRAG L EA + I + P +W
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Query: 637 RTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDL 696
L+S S+ N + IL++++LL +EP+ +++ + N+Y G+ +EAAK+ M +
Sbjct: 750 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
Query: 697 RLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
L K+ GCSWIE+ + + F + G P EI++ L+ L M
Sbjct: 810 GLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 257/526 (48%), Gaps = 14/526 (2%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD--- 117
+P L+K +L G+ +H ++ G + D F A +L+N+Y K LD A ++FD
Sbjct: 63 FPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 122
Query: 118 ----GMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE 173
G+ R W S+I GY ++ +G M + + + S+++
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
Query: 174 D--RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNF 230
+ R G+QIH F +++ + + F+ T+LI MYF G +A VF + K +V N
Sbjct: 183 NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242
Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
MI+ + +G E + +++ ++ + +FT + C ++ G+Q+H VK G
Sbjct: 243 MIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFL 350
+ + V ++++MY K GM EAE +F + ++ L W A+++ Y + +G A++ F
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 351 EFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
+ DS L+ VI CSV G +H K S + +AL+ +Y+K G
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG 422
Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR--LAGMEPDPVTFS 468
A ++ K + +++SG + ++ + +F + ++PD +
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCKN--GKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
+ + A L G +H IKTG +V VG++LI +Y+KCG + A ++F +S
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
++V+WN+M+S Y+ + L + ++ LF M +G PD +SI VL A
Sbjct: 541 NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 187/403 (46%), Gaps = 24/403 (5%)
Query: 215 NVFRGL-----AYKDVRCVNFMILEYNKAGESEMAFHVFV-HLLSSDFEPNDYTFTNVIS 268
++ RGL +Y +N I + GE A H++ H SS F + +TF +++
Sbjct: 9 HIRRGLCCVADSYISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLK 68
Query: 269 VCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD-------AI 321
C + GK +HG V G + + ++V MY K G + A ++FD +
Sbjct: 69 ACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGV 128
Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL--EL 379
S R++ W ++I GY + + + F L G+ D+ L+ V+ N E
Sbjct: 129 SARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE 188
Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGG-DLKSARMLLDGFSCKYTAEFNAILSGF- 437
G Q+HGF +++ +D L TAL+D+Y K G + + R+ ++ +N ++ GF
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
I + D+ +L + + +F+ L + GR +H +K G
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVS---TSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
D V +L++MY+KCG + A +F + D+ + WNAM++AYA + G AL LF M+
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
++ PD ++ V+ C GL G + E+ + RPI
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK----RPI 404
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/657 (32%), Positives = 357/657 (54%), Gaps = 7/657 (1%)
Query: 90 QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACD 149
+T N +I+ + K + A+ LFD M R+ +TWT L+ Y + ++ +
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 150 MYRSEE-KFNEH-TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS--LISMYF 205
M RS +H T + +L C+ + Q+HAFA+K GF+ N F+ S L+ Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 206 HSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
A +F + KD N +I Y K G + H+F+ + S +P+D+TF+
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 266 VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERN 325
V+ G+QLH L+V G R+ SVGN I+ Y KH E +FD + E +
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 326 LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHG 385
+S+ +IS Y ++ +++ F E +G + AT++ + S+L++G QLH
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 386 FAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
A+ S + +G +LVD+YAK + A ++ + T + A++SG+++K
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 446 EDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNAL 505
+ LF++ R + + D TF+ +L SAS A L+ G+ LHA+ I++G +V G+ L
Sbjct: 436 G--LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL 493
Query: 506 ITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDD 565
+ MYAKCGSI A Q+F+ + DR+ VSWNA++SA+A +G G+ A+ F +M G PD
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Query: 566 ISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLIN 625
+SILGVL AC + G E G F + IYG+ P +H+ACM+DLLGR GR +EA L++
Sbjct: 554 VSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613
Query: 626 SSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEP-KDAGSFILVSNMYAGQGMLD 684
PF ++W ++++ ++ N + A+++L +E +DA +++ +SN+YA G +
Sbjct: 614 EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWE 673
Query: 685 EAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
+ V+ M + + K SW+E++ K+H F ++ + HP +EI K++ L E++
Sbjct: 674 KVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 244/507 (48%), Gaps = 48/507 (9%)
Query: 76 LGQAVHAFLLKSGSQNDTF--EANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
+GQ VHAF +K G + F +N L+ Y + RLD+A LF+ + + ++T+ +LI G
Sbjct: 166 VGQ-VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
Y DG Y + + M +S + ++ T S +L+A L D G+Q+HA ++ +GF +
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
VG ++ Y E +F + D N +I Y++A + E + H F +
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
F+ ++ F ++S+ ++ G+QLH A+ + VGN++V MY K M EE
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
AE +F ++ +R +SWTALISGYV+ G G + F + + D S ATV+ +
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
++L LG QLH F I+ G L +V G+ LVD+YAK G +K A + + + +NA+
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
+S + D E + F++ +G++PD V+
Sbjct: 525 ISAHADN--GDGEAAIGAFAKMIESGLQPDSVS--------------------------- 555
Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-----WNAMLSAYALHGLGKG 548
I+G ++T + CG ++ + F+ +S ++ + ML +G
Sbjct: 556 ------ILG--VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607
Query: 549 ALLLFEEMKREGFAPDDISILGVLQAC 575
A L +EM F PD+I VL AC
Sbjct: 608 AEKLMDEMP---FEPDEIMWSSVLNAC 631
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 164/358 (45%), Gaps = 1/358 (0%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
++K +G D LGQ +HA + +G D N +++ Y+K +R+ + LFD M
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
+++ +I Y YE+ L +M + +L + L G Q+H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
A+ + ++ + VG SL+ MY F EAE +F+ L + +I Y + G
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
+F + S+ + TF V+ + GKQLH ++ G + + G+ +V
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495
Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
MY K G ++A ++F+ + +RN +SW ALIS + +G G AI F + ++ G+ DS
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 364 LATVIDGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
+ V+ CS C +E G + + +G + ++D+ + G A L+D
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 143/274 (52%), Gaps = 2/274 (0%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
++ I+ L++G+ +H L + + + N+L+++YAK + A+ +F + R+
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
++WT+LI GY+ G + + L + M S + ++ T + +L+A + + G+Q+HA
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
F I+SG NVF G+ L+ MY G ++A VF + ++ N +I + G+ E
Sbjct: 477 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEA 536
Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISVGNAIV 302
A F ++ S +P+ + V++ C VE+G + ++ +G+ + ++
Sbjct: 537 AIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACML 596
Query: 303 TMYGKHGMSEEAERMFDAIS-ERNLISWTALISG 335
+ G++G EAE++ D + E + I W+++++
Sbjct: 597 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 33/133 (24%)
Query: 476 SQACLVRGRSLHAYSIKTGYAAD-------------------------------VIVGNA 504
S A + R + A IKTG+ D + N
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA-- 562
+I+ + K G + A +F + DR +V+W ++ YA + A LF +M R
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 563 PDDISILGVLQAC 575
PD ++ +L C
Sbjct: 145 PDHVTFTTLLPGC 157
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/657 (31%), Positives = 350/657 (53%), Gaps = 2/657 (0%)
Query: 74 LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
L++G+ +H +LK G +DT+ N L++LY L A+ +F M R A+T+ +LI G
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
G E + + M+ + + +T + ++ ACS G+Q+HA+ K GF +N
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 423
Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
+ +L+++Y A + F ++V N M++ Y + +F +F +
Sbjct: 424 NKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 483
Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
+ PN YT+ +++ C +E G+Q+H +K V + ++ MY K G +
Sbjct: 484 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543
Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
A + + ++++SWT +I+GY + KA+ F + LD GI D L + C+
Sbjct: 544 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 603
Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
L+ G Q+H A G+ SD+ ALV +Y++ G ++ + + + +NA+
Sbjct: 604 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663
Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
+SGF + + + E+ + +F + G++ + TF + ++ A + +G+ +HA KT
Sbjct: 664 VSGFQQ--SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
GY ++ V NALI+MYAKCGSI A + F +S ++ VSWNA+++AY+ HG G AL F
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
++M P+ ++++GVL AC + GL + GI F + YGL P EH+ C+VD+L R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
AG LS A I P L+WRTL+S + N + A+ LL+LEP+D+ +++L+
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
SN+YA D R M + + KE G SWIE+ + +H F ++HP ++EI+
Sbjct: 902 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 170/583 (29%), Positives = 274/583 (46%), Gaps = 27/583 (4%)
Query: 71 SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
+G L G+ +H+ +LK G ++ + L + Y L A K+FD M R+ TW +
Sbjct: 98 NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEAC---SLLEDRIFGEQIHAFAIK 187
IK V G+ M NE T S +LEAC S+ D + EQIHA +
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--EQIHARILY 215
Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
G ++ V LI +Y +G A VF GL KD MI +K A +
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
F + P Y F++V+S C + +E G+QLHGL +K G + V NA+V++Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
G AE +F +S+R+ +++ LI+G + G+G KA+ F G+ DS+ LA++
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF---SC 424
+ CS L G QLH + K G+ S+ ++ AL+++YAK D+++A LD F
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA---LDYFLETEV 452
Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
+ +N +L + + DD + +F Q ++ + P+ T+ +L L G
Sbjct: 453 ENVVLWNVMLVAY--GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
+H+ IKT + + V + LI MYAK G +D A+ I + +D+VSW M++ Y +
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY------GLR 598
AL F +M G D++ + + AC G+ E +QI+ G
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSAC-------AGLQALKEGQQIHAQACVSGFS 623
Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
L +V L R G++ E+ + ++ + W LVS
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVS 665
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 250/508 (49%), Gaps = 8/508 (1%)
Query: 70 GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
GS + + +HA +L G ++ T N LI+LY++ +D+A+++FDG+ ++ +W +
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
+I G + + + CDMY + S +L AC +E GEQ+H +K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFV 249
F ++ +V +L+S+YFH G AE++F ++ +D N +I ++ G E A +F
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
+ EP+ T +++ C + + G+QLH K G + A++ +Y K
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG---ICCDSSCLAT 366
E A F N++ W ++ Y G N F F + I + +
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 367 VIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY 426
++ C +LELG Q+H IK + + + + L+D+YAK G L +A +L F+ K
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
+ +++G+ + DD+ + F Q G+ D V + +S A L G+ +
Sbjct: 556 VVSWTTMIAGYTQYNFDDK--ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
HA + +G+++D+ NAL+T+Y++CG I+ ++ F+ D ++WNA++S + G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 547 KGALLLFEEMKREGFAPDDISILGVLQA 574
+ AL +F M REG ++ + ++A
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKA 701
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 220/488 (45%), Gaps = 6/488 (1%)
Query: 59 NDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
N LV G L GQ +HA+ K G ++ L+NLYAK ++ A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 119 MLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
V + + W ++ Y D + I M E N++T IL+ C L D G
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
EQIH+ IK+ F+ N +V + LI MY G A ++ A KDV MI Y +
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
+ A F +L ++ TN +S C ++EG+Q+H A G ++
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
NA+VT+Y + G EE+ F+ + I+W AL+SG+ +SG+ +A+ F+ GI
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
++ + + S +N++ G Q+H K GY S+ + AL+ +YAK G + A
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
S K +NAI++ + + E + F Q + + P+ VT +LS + S
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSE--ALDSFDQMIHSNVRPNHVTLVGVLS-ACSHI 806
Query: 479 CLVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDR-DIVSWNA 535
LV + S+ + Y + ++ M + G + A + + + + D + W
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866
Query: 536 MLSAYALH 543
+LSA +H
Sbjct: 867 LLSACVVH 874
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/689 (30%), Positives = 374/689 (54%), Gaps = 11/689 (1%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
+P ++K G D+ +G AVH ++K+G D F N L++ Y + A +LFD M
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKF--NEHTCSVILEACSLLEDRI 176
R+ ++W S+I+ + D+G E + +M + F + T +L C+ +
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
G+ +H +A+K + + + +L+ MY GC A+ +F+ K+V N M+ ++
Sbjct: 310 LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 369
Query: 237 KAGESEMAFHVFVHLLS--SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
G++ F V +L+ D + ++ T N + VC+ + K+LH ++K V
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
V NA V Y K G A+R+F I + + SW ALI G+ +S +++ L+
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
G+ DS + +++ CS +L LG ++HGF I++ D+ + +++ +Y G+L +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
+ L D K +N +++G+++ D + +F Q L G++ ++ +
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDR--ALGVFRQMVLYGIQLCGISMMPVFGAC 607
Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
+ L GR HAY++K D + +LI MYAK GSI + ++F G+ ++ SWN
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667
Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
AM+ Y +HGL K A+ LFEEM+R G PDD++ LGVL AC +SGL G+ ++++
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727
Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSI 653
+GL+P L+H+AC++D+LGRAG+L +A+ ++ E+ + +W++L+S ++ N +
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
+ +L +LEP+ +++L+SN+YAG G ++ KVR MN++ L K+AGCSWIE++ K+
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 847
Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMKL 742
FV + EEI S +L EMK+
Sbjct: 848 FSFVVGERFLDGFEEIKSLWSIL--EMKI 874
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 275/577 (47%), Gaps = 25/577 (4%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGS---QNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
L++ S D+++G+ +H L SGS +ND +I +YA D ++ +FD +
Sbjct: 90 LLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 147
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH-TCSVILEACSLLEDRIFGE 179
++ W ++I Y + Y+ VL +M + + +H T +++AC+ + D G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
+H +K+G +VFVG +L+S Y G +A +F + +++ N MI ++ G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 240 ESEMAFHVFVHLLSSD----FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
SE +F + ++ + F P+ T V+ VC + GK +HG AVK + +E+
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
+ NA++ MY K G A+ +F + +N++SW ++ G+ G + + L
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 356 G--ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLK 413
G + D + + C S L +LH +++K ++ + + A V YAK G L
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 414 SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
A+ + G K +NA++ G + ++D + Q +++G+ PD T LLS
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQ--SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
+ L G+ +H + I+ D+ V +++++Y CG + +F + D+ +VSW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEGGICLFNEIE 592
N +++ Y +G AL +F +M G IS++ V AC + L G
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG------REA 619
Query: 593 QIYGLRPILEH---FAC-MVDLLGRAGRLSEAMNLIN 625
Y L+ +LE AC ++D+ + G ++++ + N
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN 656
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 215/421 (51%), Gaps = 12/421 (2%)
Query: 164 VILEACSLLEDRIFGEQIHAFAIKSG-FENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
++L+A +D G +IH S N+ + T +I+MY G ++ VF L
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSS-DFEPNDYTFTNVISVCYENLGVEEGKQ 281
K++ N +I Y++ + F+ ++S+ D P+ +T+ VI C V G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
+HGL VK G+V ++ VGNA+V+ YG HG +A ++FD + ERNL+SW ++I + +G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 342 GGKAINGFLEFL----DLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
++ E + D D + L TV+ C+ + LG +HG+A+K ++
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
L AL+D+Y+K G + +A+M+ + K +N ++ GF + D VL +Q L
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE-GDTHGTFDVL--RQML 385
Query: 458 AGME---PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
AG E D VT + + ++ L + LH YS+K + + +V NA + YAKCGS
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
+ A ++F GI + + SWNA++ +A + +L +MK G PD ++ +L A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 575 C 575
C
Sbjct: 506 C 506
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 143/323 (44%), Gaps = 46/323 (14%)
Query: 54 RTLLFNDWPQLVKISIGSGD-----------------------------------LKLGQ 78
R+ N W L+ S D L+LG+
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Query: 79 AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDG 138
VH F++++ + D F ++++LY L Q LFD M +S ++W ++I GYL +G
Sbjct: 517 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG 576
Query: 139 DYESVLGIACDMYRSEEKFNEHTCSV----ILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
+ LG+ +R + C + + ACSLL G + HA+A+K E++
Sbjct: 577 FPDRALGV----FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA 632
Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
F+ SLI MY +G ++ VF GL K N MI+ Y G ++ A +F + +
Sbjct: 633 FIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRT 692
Query: 255 DFEPNDYTFTNVISVCYENLGVEEG-KQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
P+D TF V++ C + + EG + L + FG+ + ++ M G+ G ++
Sbjct: 693 GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDK 752
Query: 314 AERMF--DAISERNLISWTALIS 334
A R+ + E ++ W +L+S
Sbjct: 753 ALRVVAEEMSEEADVGIWKSLLS 775
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 363 bits (931), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 212/691 (30%), Positives = 376/691 (54%), Gaps = 14/691 (2%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
+ L+K I + D +LG+ VHA L++ + D+ N+LI+LY+K A+ +F+ M
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 121 ---VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
R ++W++++ Y ++G + + + N++ + ++ ACS +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 178 GEQIHAFAIKSG-FENNVFVGTSLISMYFH-SGCFREAENVFRGLAYKDVRCVNFMILEY 235
G F +K+G FE++V VG SLI M+ F A VF ++ +V MI
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
+ G A F+ ++ S FE + +T ++V S C E + GKQLH A++ G+V ++
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV 304
Query: 296 SVGNAIVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYVRSGH-GGKAINGFLE 351
++V MY K G ++ ++FD + + +++SWTALI+GY+++ + +AIN F E
Sbjct: 305 EC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 352 FLDLG-ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG 410
+ G + + ++ C S+ +G Q+ G A K G S+ + +++ ++ K
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 411 DLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRL 470
++ A+ + S K +N L G + + E L S+ + TF+ L
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNL--NFEQAFKLLSEITERELGVSAFTFASL 480
Query: 471 LSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDI 530
LS A+ + +G +H+ +K G + + V NALI+MY+KCGSID A ++F + +R++
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 531 VSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNE 590
+SW +M++ +A HG L F +M EG P++++ + +L AC + GL G FN
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600
Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSK 650
+ + + ++P +EH+ACMVDLL RAG L++A IN+ PF L+WRT + ++ +N++
Sbjct: 601 MYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE 660
Query: 651 FSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEID 710
LA++++L+L+P + ++I +SN+YA G +E+ ++R M + L KE GCSWIE+
Sbjct: 661 LGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVG 720
Query: 711 SKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
K+H F HP + +IY +LD L E+K
Sbjct: 721 DKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 210/418 (50%), Gaps = 13/418 (3%)
Query: 130 LIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
LI +L+ GD + M R + T S +L++C D G+ +HA I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVF---RGLAYKDVRCVNFMILEYNKAGESEMAF 245
E + + SLIS+Y SG +AE+VF R +DV + M+ Y G A
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVR-EISVGNAIVTM 304
VFV L PNDY +T VI C + V G+ G +K G ++ VG +++ M
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 305 YGKHGMS-EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
+ K S E A ++FD +SE N+++WT +I+ ++ G +AI FL+ + G D
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK---GGDLKSARMLLD 420
L++V C+ NL LG QLH +AI+ G + DV +LVD+YAK G + R + D
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFD 329
Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAG-MEPDPVTFSRLLSLSASQAC 479
+ A+++G+M K + + + LFS+ G +EP+ TFS + +
Sbjct: 330 RMEDHSVMSWTALITGYM-KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
G+ + + K G A++ V N++I+M+ K ++ A + F+ +S++++VS+N L
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFL 446
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 361 bits (927), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 210/672 (31%), Positives = 361/672 (53%), Gaps = 4/672 (0%)
Query: 71 SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
S L G+ +H +L S + DT N+++++Y K L A+++FD M R+ +++TS+
Sbjct: 80 SRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 139
Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
I GY +G + + M + + ++ I++AC+ D G+Q+HA IK
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199
Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG-ESEMAFHVFV 249
+++ +LI+MY +A VF G+ KD+ + +I +++ G E E H+
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 259
Query: 250 HLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHG 309
L F PN+Y F + + C L + G Q+HGL +K + G ++ MY + G
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCG 319
Query: 310 MSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID 369
A R+FD I + SW +I+G +G+ +A++ F + G D+ L +++
Sbjct: 320 FLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLC 379
Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY-TA 428
+ L G+Q+H + IK G+L+D+ + +L+ +Y DL L + F +
Sbjct: 380 AQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSV 439
Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
+N IL+ ++ + +++ LF ++ EPD +T LL + L G +H
Sbjct: 440 SWNTILTACLQH--EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC 497
Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
YS+KTG A + + N LI MYAKCGS+ A +IF + +RD+VSW+ ++ YA G G+
Sbjct: 498 YSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEE 557
Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
AL+LF+EMK G P+ ++ +GVL AC + GL E G+ L+ ++ +G+ P EH +C+V
Sbjct: 558 ALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVV 617
Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
DLL RAGRL+EA I+ ++W+TL+S K N + A++ +L ++P ++
Sbjct: 618 DLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNST 677
Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
+ +L+ +M+A G + AA +R++M + K G SWIEI+ K+H F A HPE ++
Sbjct: 678 AHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDD 737
Query: 729 IYSKLDLLNDEM 740
IY+ L + +M
Sbjct: 738 IYTVLHNIWSQM 749
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/539 (28%), Positives = 255/539 (47%), Gaps = 25/539 (4%)
Query: 168 ACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRC 227
ACS G +IH + S + + + ++SMY G R+A VF + +++
Sbjct: 76 ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 135
Query: 228 VNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAV 287
+I Y++ G+ A +++ +L D P+ + F ++I C + V GKQLH +
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 288 KFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAIN 347
K + NA++ MY + +A R+F I ++LISW+++I+G+ + G +A++
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 348 GFLEFLDLGIC-CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
E L G+ + + + CS + G Q+HG IK + G +L D+Y
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 407 AKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVT 466
A+ G L SAR + D TA +N I++G DE + +FSQ R +G PD ++
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE--AVSVFSQMRSSGFIPDAIS 373
Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI- 525
LL L +G +H+Y IK G+ AD+ V N+L+TMY C + F +F+
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACI-YSGLSEGG 584
++ D VSWN +L+A H L LF+ M PD I++ +L+ C+ S L G
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 585 ICLFNEIEQIYGLRPILEHFA--CMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSV 642
++ GL P E F ++D+ + G L +A + +S + R +VS
Sbjct: 494 QVHCYSLKT--GLAP--EQFIKNGLIDMYAKCGSLGQARRIFDS-------MDNRDVVSW 542
Query: 643 SKLMANSKFSILASKRLLDL-EPKDAG------SFILVSNMYAGQGMLDEAAKVRTTMN 694
S L+ S + L+ E K AG +F+ V + G+++E K+ TM
Sbjct: 543 STLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 236/485 (48%), Gaps = 6/485 (1%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
++K S D+ LG+ +HA ++K S + N LI +Y +FN++ A ++F G+ ++
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
Query: 124 AITWTSLIKGYLDDG-DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIH 182
I+W+S+I G+ G ++E++ + + NE+ L+ACS L +G QIH
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 183 AFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
IKS N G SL MY G A VF + D N +I G ++
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353
Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIV 302
A VF + SS F P+ + +++ + + + +G Q+H +K+G + +++V N+++
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 303 TMYGKHGMSEEAERMF-DAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
TMY +F D + + +SW +++ ++ + + F L D
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
+ ++ GC S+L+LG Q+H +++K G + + L+D+YAK G L AR + D
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
+ ++ ++ G+ + + E+ ++LF + + AG+EP+ VTF +L+ + +
Sbjct: 534 MDNRDVVSWSTLIVGYAQ--SGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE 591
Query: 482 RGRSLHA-YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSA 539
G L+A + G + + ++ + A+ G ++ A + + + D+V W +LSA
Sbjct: 592 EGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Query: 540 YALHG 544
G
Sbjct: 652 CKTQG 656
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 163/322 (50%), Gaps = 1/322 (0%)
Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
+S F+ T+ ++I C + + +G+++H + + + N I++MYGK G
Sbjct: 60 NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLR 119
Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
+A +FD + ERNL+S+T++I+GY ++G G +AI +L+ L + D ++I C+
Sbjct: 120 DAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179
Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
S++ LG QLH IK S + AL+ +Y + + A + G K +++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239
Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
I++GF ++ + E + L P+ F L +S G +H IK
Sbjct: 240 IIAGF-SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK 298
Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
+ A + I G +L MYA+CG ++ A ++F I D SWN +++ A +G A+ +
Sbjct: 299 SELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSV 358
Query: 553 FEEMKREGFAPDDISILGVLQA 574
F +M+ GF PD IS+ +L A
Sbjct: 359 FSQMRSSGFIPDAISLRSLLCA 380
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 213/686 (31%), Positives = 373/686 (54%), Gaps = 7/686 (1%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
+P LVK + + K + + G + F A++LI Y ++ ++DV KLFD +L
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL 200
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS--LLEDRIFG 178
+ + W ++ GY G +SV+ M + N T +L C+ LL D G
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID--LG 258
Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
Q+H + SG + + SL+SMY G F +A +FR ++ D N MI Y ++
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
G E + F ++SS P+ TF++++ + +E KQ+H ++ + +I +
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
+A++ Y K A+ +F + +++ +TA+ISGY+ +G ++ F + + I
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
+ L +++ + L+LG +LHGF IK G+ + +G A++D+YAK G + A +
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
+ S + +N++++ + +D+ + +F Q ++G+ D V+ S LS A+
Sbjct: 499 FERLSKRDIVSWNSMITRCAQ--SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLP 556
Query: 479 CLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLS 538
G+++H + IK A+DV + LI MYAKCG++ A +FK + +++IVSWN++++
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 539 AYALHGLGKGALLLFEEM-KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
A HG K +L LF EM ++ G PD I+ L ++ +C + G + G+ F + + YG+
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
+P EH+AC+VDL GRAGRL+EA + S PF +W TL+ +L N + + +AS
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASS 736
Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
+L+DL+P ++G ++L+SN +A + KVR+ M + + K G SWIEI+ + H FV
Sbjct: 737 KLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFV 796
Query: 718 ASGKDHPESEEIYSKLDLLNDEMKLK 743
+ +HPES IYS L+ L E++L+
Sbjct: 797 SGDVNHPESSHIYSLLNSLLGELRLE 822
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 165/610 (27%), Positives = 283/610 (46%), Gaps = 22/610 (3%)
Query: 19 SLPPLKKKVPINTFSPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQ 78
++ P KK +P+ S + + S+ +CS LL + G+
Sbjct: 13 AIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLL-----------------RQGK 55
Query: 79 AVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-LVRSAI-TWTSLIKGYLD 136
VHAFL+ + D++ ++ +YA K+F + L RS+I W S+I ++
Sbjct: 56 QVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVR 115
Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
+G L M + T +++AC L++ + + G + N FV
Sbjct: 116 NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFV 175
Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
+SLI Y G +F + KD N M+ Y K G + F +
Sbjct: 176 ASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQI 235
Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
PN TF V+SVC L ++ G QLHGL V GV E S+ N++++MY K G ++A +
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
+F +S + ++W +ISGYV+SG +++ F E + G+ D+ ++++ S N
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355
Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
LE Q+H + ++H D+ L +AL+D Y K + A+ + + F A++SG
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
++ D + +F + P+ +T +L + L GR LH + IK G+
Sbjct: 416 YLHN--GLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
+G A+I MYAKCG ++ A++IF+ +S RDIVSWN+M++ A A+ +F +M
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
G D +SI L AC G + + + + L + + ++D+ + G
Sbjct: 534 GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGN 592
Query: 617 LSEAMNLINS 626
L AMN+ +
Sbjct: 593 LKAAMNVFKT 602
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 216/696 (31%), Positives = 380/696 (54%), Gaps = 13/696 (1%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
++K+S D G+ +H +K G +D +L++ Y K + +K+FD M R+
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE--QI 181
+TWT+LI GY + + VL + M + N T + L L E+ + G Q+
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV--LAEEGVGGRGLQV 216
Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
H +K+G + + V SLI++Y G R+A +F K V N MI Y G
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
A +F + + ++ +F +VI +C + +QLH VK+G + + ++ A+
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336
Query: 302 VTMYGKHGMSEEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
+ Y K +A R+F I N++SWTA+ISG++++ +A++ F E G+ +
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPN 396
Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
+ ++ V S E+ H +K Y +GTAL+D Y K G ++ A +
Sbjct: 397 EFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSL-SASQAC 479
G K ++A+L+G+ + + E + +F + G++P+ TFS +L++ +A+ A
Sbjct: 453 GIDDKDIVAWSAMLAGYAQ--TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
+ +G+ H ++IK+ + + V +AL+TMYAK G+I+ A ++FK ++D+VSWN+M+S
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
YA HG AL +F+EMK+ D ++ +GV AC ++GL E G F+ + + + P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
EH +CMVDL RAG+L +AM +I + P +WRT+++ ++ ++ LA++++
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
+ ++P+D+ +++L+SNMYA G E AKVR MN+ + KE G SWIE+ +K + F+A
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 750
Query: 720 GKDHPESEEIYSKLDLLNDEMK-LKVKDSSAFELQD 754
+ HP ++IY KL+ L+ +K L + +++ LQD
Sbjct: 751 DRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQD 786
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 243/478 (50%), Gaps = 7/478 (1%)
Query: 107 NRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVIL 166
+RL A LFD R ++ SL+ G+ DG + + +++R + + S +L
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 167 EACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVR 226
+ + L D +FG Q+H IK GF ++V VGTSL+ Y F++ VF + ++V
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 227 CVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLA 286
+I Y + ++ +F+ + + +PN +TF + V E G Q+H +
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 287 VKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAI 346
VK G+ + I V N+++ +Y K G +A +FD +++++W ++ISGY +G +A+
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 347 NGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIY 406
F + S A+VI C+ L QLH +K+G+L D + TAL+ Y
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 407 AKGGDLKSARMLLDGFSC-KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPV 465
+K + A L C + A++SGF++ D +E+ + LFS+ + G+ P+
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN--DGKEEAVDLFSEMKRKGVRPNEF 398
Query: 466 TFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGI 525
T+S +L+ ++ +HA +KT Y VG AL+ Y K G ++ A ++F GI
Sbjct: 399 TYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 526 SDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
D+DIV+W+AML+ YA G + A+ +F E+ + G P++ + +L C + S G
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 512
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 8/247 (3%)
Query: 399 GTALVDIYAKG----GDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQ 454
G A V IY G L +A L D + + ++L GF + +E + +
Sbjct: 26 GVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGF-SRDGRTQEAKRLFLNI 84
Query: 455 QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGS 514
RL GME D FS +L +SA+ + GR LH IK G+ DV VG +L+ Y K +
Sbjct: 85 HRL-GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143
Query: 515 IDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
++F + +R++V+W ++S YA + + L LF M+ EG P+ + L
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV 203
Query: 575 CIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL 634
G+ G+ + + + GL + +++L + G + +A L + + +S +
Sbjct: 204 LAEEGVGGRGLQVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVV 261
Query: 635 LWRTLVS 641
W +++S
Sbjct: 262 TWNSMIS 268
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/674 (31%), Positives = 352/674 (52%), Gaps = 5/674 (0%)
Query: 71 SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI-TWTS 129
+ L+ + VH +L G + D +LIN+Y A+ +F+ +RS + W S
Sbjct: 17 TKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNS 76
Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKF-NEHTCSVILEACSLLEDRIFGEQIHAFAIKS 188
L+ GY + + L + + + T +++A L G IH +KS
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKS 136
Query: 189 GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF 248
G+ +V V +SL+ MY F + VF + +DV N +I + ++GE+E A +F
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
+ SS FEPN + T IS C L +E GK++H VK G + V +A+V MYGK
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
E A +F + ++L++W ++I GYV G + + G + L +++
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
CS NL G +HG+ I+ +D+ + +L+D+Y K G+ A +
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE 376
Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
+N ++S ++ + + ++ Q G++PD VTF+ +L + A L +G+ +H
Sbjct: 377 SWNVMISSYIS--VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL 434
Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
++ D ++ +AL+ MY+KCG+ AF+IF I +D+VSW M+SAY HG +
Sbjct: 435 SISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPRE 494
Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
AL F+EM++ G PD +++L VL AC ++GL + G+ F+++ YG+ PI+EH++CM+
Sbjct: 495 ALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMI 554
Query: 609 DLLGRAGRLSEAMNLINSSP-FSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDA 667
D+LGRAGRL EA +I +P S++ L TL S L ++ L++ P DA
Sbjct: 555 DILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDA 614
Query: 668 GSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESE 727
+++++ N+YA D A +VR M ++ L K+ GCSWIE+ K+ HF A + H +E
Sbjct: 615 STYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAE 674
Query: 728 EIYSKLDLLNDEMK 741
+Y L LL+ M+
Sbjct: 675 NVYECLALLSGHME 688
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 248/524 (47%), Gaps = 25/524 (4%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
+P ++K G LG+ +H ++KSG D A++L+ +YAKFN + + ++FD M
Sbjct: 110 FPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP 169
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
R +W ++I + G+ E L + M S + N + +V + ACS L G++
Sbjct: 170 ERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKE 229
Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
IH +K GFE + +V ++L+ MY C A VF+ + K + N MI Y G+
Sbjct: 230 IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD 289
Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
S+ + ++ P+ T T+++ C + + GK +HG ++ V +I V +
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCS 349
Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
++ +Y K G + AE +F + SW +IS Y+ G+ KA+ + + + +G+ D
Sbjct: 350 LIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPD 409
Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLL 419
+V+ CS + LE G Q+H +I L +D L +AL+D+Y+K G+ K A +
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIH-LSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
+ K + ++S + + + F + + G++PD VT +LS
Sbjct: 469 NSIPKKDVVSWTVMISAYGSH--GQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGL 526
Query: 480 LVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVSWNA-- 535
+ G + +++ Y + I+ + +I + + G + A++I + + S NA
Sbjct: 527 IDEGLKFFS-QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE---TSDNAEL 582
Query: 536 ---MLSAYAL---HGLG-KGALLLFEEMKREGFAPDDISILGVL 572
+ SA L H LG + A LL E PDD S VL
Sbjct: 583 LSTLFSACCLHLEHSLGDRIARLLVENY------PDDASTYMVL 620
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 355 bits (912), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 210/709 (29%), Positives = 380/709 (53%), Gaps = 25/709 (3%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFE-ANNLINLYAKFNRLDVAQKLFDGM 119
+P L+K D++LG+ +HA + K G D+ AN L+NLY K K+FD +
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159
Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLL---EDRI 176
R+ ++W SLI +E L M + + T ++ ACS L E +
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
G+Q+HA+ ++ G E N F+ +L++MY G ++ + +D+ N ++
Sbjct: 220 MGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
+ + A ++ EP+++T ++V+ C + GK+LH A+K G + E S
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 297 -VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD- 354
VG+A+V MY R+FD + +R + W A+I+GY ++ H +A+ F+ +
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
G+ +S+ +A V+ C +HGF +K G D + L+D+Y++ G +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR-----------LAGMEPD 463
A + + +N +++G++ ++ ED ++L + + ++P+
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYV--FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 464 PVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFK 523
+T +L A+ + L +G+ +HAY+IK A DV VG+AL+ MYAKCG + + ++F
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576
Query: 524 GISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEG 583
I +++++WN ++ AY +HG G+ A+ L M +G P++++ + V AC +SG+ +
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636
Query: 584 GICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSP--FSESPLLWRTLVS 641
G+ +F ++ YG+ P +H+AC+VDLLGRAGR+ EA L+N P F+++ W +L+
Sbjct: 637 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG-AWSSLLG 695
Query: 642 VSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKE 701
S++ N + +A++ L+ LEP A ++L++N+Y+ G+ D+A +VR M + + KE
Sbjct: 696 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755
Query: 702 AGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLK--VKDSS 748
GCSWIE ++H FVA HP+SE++ L+ L + M+ + V D+S
Sbjct: 756 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTS 804
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 149/596 (25%), Positives = 283/596 (47%), Gaps = 35/596 (5%)
Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
RS W L++ + + DM K + + +L+A + L+D G+QI
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 182 HAFAIKSGFE-NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
HA K G+ ++V V +L+++Y G F VF ++ ++ N +I +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE----GKQLHGLAVKFGVVREIS 296
EMA F +L + EP+ +T +V++ C NL + E GKQ+H ++ G +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTAC-SNLPMPEGLMMGKQVHAYGLRKGELNSFI 238
Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
+ N +V MYGK G ++ + + R+L++W ++S ++ +A+ E + G
Sbjct: 239 I-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSA 415
+ D +++V+ CS L G +LH +A+K+G L + +G+ALVD+Y + S
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
R + DG + +NA+++G+ + D+E +++ + AG+ + T + ++
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQN-EHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
R ++H + +K G D V N L+ MY++ G ID A +IF + DRD+V+WN
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 536 MLSAYALHGLGKGALLLFEEMK-----------REGFAPDDISILGVLQAC-IYSGLSEG 583
M++ Y + ALLL +M+ R P+ I+++ +L +C S L++G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 584 GICLFNEIEQIYGLRPILEH----FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
EI Y ++ L + +VD+ + G L + + + P ++ + W +
Sbjct: 537 -----KEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 589
Query: 640 VSVSKLMANSKFSI--LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
+ + N + +I L + ++P + +FI V + GM+DE ++ M
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEV-TFISVFAACSHSGMVDEGLRIFYVM 644
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 355 bits (911), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 208/674 (30%), Positives = 355/674 (52%), Gaps = 6/674 (0%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
+++ I D +A+H +LK GS D F N L+N Y K A LFD M R+
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
+++ +L +GY + +G+ ++R + N H + L+ L+ +H+
Sbjct: 115 NVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHS 170
Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
+K G+++N FVG +LI+ Y G A VF G+ KD+ ++ Y + G E
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFED 230
Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
+ + + + F PN+YTF + + K +HG +K V + VG ++
Sbjct: 231 SLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQ 290
Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
+Y + G +A ++F+ + + +++ W+ +I+ + ++G +A++ F+ + + +
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
L+++++GC++ LG QLHG +K G+ D+ + AL+D+YAK + +A L S
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
K +N ++ G+ E + + + +F + + VTFS L AS A + G
Sbjct: 411 SKNEVSWNTVIVGY-ENLGEGGK-AFSMFREALRNQVSVTEVTFSSALGACASLASMDLG 468
Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
+H +IKT A V V N+LI MYAKCG I A +F + D+ SWNA++S Y+ H
Sbjct: 469 VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTH 528
Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEH 603
GLG+ AL + + MK P+ ++ LGVL C +GL + G F + + +G+ P LEH
Sbjct: 529 GLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEH 588
Query: 604 FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLE 663
+ CMV LLGR+G+L +AM LI P+ S ++WR ++S S N +F+ +++ +L +
Sbjct: 589 YTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKIN 648
Query: 664 PKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDH 723
PKD +++LVSNMYAG A +R +M ++ + KE G SWIE +H+F DH
Sbjct: 649 PKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDH 708
Query: 724 PESEEIYSKLDLLN 737
P+ + I L+ LN
Sbjct: 709 PDMKLINGMLEWLN 722
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 6/419 (1%)
Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENV 216
+ H +L C D I + IH +K G ++F L++ Y +G ++A N+
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 217 FRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGV 276
F + ++ V+F+ L A + + + +H + P + FT+ + +
Sbjct: 107 FDEMPERNN--VSFVTLAQGYACQDPIGLYSRLHREGHELNP--HVFTSFLKLFVSLDKA 162
Query: 277 EEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGY 336
E LH VK G VG A++ Y G + A +F+ I ++++ W ++S Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 337 VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
V +G+ ++ G ++ T + + +HG +K Y+ D
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
R+G L+ +Y + GD+ A + + ++ +++ F + +E + LF + R
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNE--AVDLFIRMR 340
Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
A + P+ T S +L+ A C G LH +K G+ D+ V NALI +YAKC +D
Sbjct: 341 EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
A ++F +S ++ VSWN ++ Y G G A +F E R + +++ L AC
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 154/350 (44%), Gaps = 35/350 (10%)
Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
+ + + ++ C + K +H +K G ++ N ++ Y K G ++A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 319 DAISERNLISWTALISGYV---------RSGHGGKAING--FLEFLDLGICCDSSCLATV 367
D + ERN +S+ L GY R G +N F FL L + D +
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA----- 162
Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
E+ LH +K GY S+ +G AL++ Y+ G + SAR + +G CK
Sbjct: 163 ----------EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI 212
Query: 428 AEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLH 487
+ I+S ++E ED + L S R+AG P+ TF L S + +H
Sbjct: 213 VVWAGIVSCYVEN--GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270
Query: 488 AYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGK 547
+KT Y D VG L+ +Y + G + AF++F + D+V W+ M++ + +G
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 548 GALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
A+ LF M+ P++ ++ +L C S G EQ++GL
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG-------EQLHGL 373
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/710 (30%), Positives = 370/710 (52%), Gaps = 10/710 (1%)
Query: 33 SPNPKSQVAYLCSISSVSCSERTLLFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQND 92
S N ++ V LC RTL ++++ S LK G+ V F+ +G D
Sbjct: 74 SGNLENAVKLLCVSGKWDIDPRTLC-----SVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 93 TFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
+ + L +Y L A ++FD + + A+ W L+ GD+ +G+ M
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 153 SEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFRE 212
S + + +T S + ++ S L GEQ+H F +KSGF VG SL++ Y +
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS 248
Query: 213 AENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE 272
A VF + +DV N +I Y G +E VFV +L S E + T +V + C +
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308
Query: 273 NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTAL 332
+ + G+ +H + VK RE N ++ MY K G + A+ +F +S+R+++S+T++
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368
Query: 333 ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY 392
I+GY R G G+A+ F E + GI D + V++ C+ L+ G ++H + ++
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 393 LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM--V 450
D+ + AL+D+YAK G ++ A ++ K +N I+ G+ + +E + +
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488
Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
L ++R + PD T + +L AS + +GR +H Y ++ GY +D V N+L+ MYA
Sbjct: 489 LLEEKRFS---PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
KCG++ A +F I+ +D+VSW M++ Y +HG GK A+ LF +M++ G D+IS +
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
+L AC +SGL + G FN + + P +EH+AC+VD+L R G L +A I + P
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665
Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
+W L+ ++ + K + ++++ +LEP++ G ++L++N+YA ++ ++R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725
Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEM 740
+ L K GCSWIEI +++ FVA +PE+E I + L + M
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/607 (33%), Positives = 328/607 (54%), Gaps = 5/607 (0%)
Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
YL G Y ++L DM S+ + ++ T ++L ++ G+Q+H A+K G +
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
+ V SLI+MY F A VF ++ +D+ N +I + G A +F+ LL
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 254 SDFEPNDYTFTNVISVCYE-NLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSE 312
+P+ YT T+V+ G+ KQ+H A+K V + V A++ Y ++ +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
EAE +F+ +L++W A+++GY +S G K + F G D LATV C
Sbjct: 470 EAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
+ G Q+H +AIK GY D+ + + ++D+Y K GD+ +A+ D +
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
++SG +E +EE +FSQ RL G+ PD T + L S+ L +GR +HA ++K
Sbjct: 589 MISGCIEN--GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK 646
Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
D VG +L+ MYAKCGSID A+ +FK I +I +WNAML A HG GK L L
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706
Query: 553 FEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLG 612
F++MK G PD ++ +GVL AC +SGL + YG++P +EH++C+ D LG
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 613 RAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFIL 672
RAG + +A NLI S S ++RTL++ ++ +++ + +LL+LEP D+ +++L
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVL 826
Query: 673 VSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSK 732
+SNMYA DE RT M ++ K+ G SWIE+ +K+H FV + + ++E IY K
Sbjct: 827 LSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRK 886
Query: 733 L-DLLND 738
+ D++ D
Sbjct: 887 VKDMIRD 893
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 164/635 (25%), Positives = 299/635 (47%), Gaps = 43/635 (6%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
++K+ + SG + ++ H + K G D F A L+N+Y KF ++ + LF+ M R
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
+ W ++K YL+ G E + ++ + S NE T ++ RI G+ A
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA--------RISGDDSDA 262
Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
+KS F N G S+ +E +FR N + EY +G+
Sbjct: 263 GQVKS-FAN----GNDASSV---------SEIIFR----------NKGLSEYLHSGQYSA 298
Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
F ++ SD E + TF +++ + + G+Q+H +A+K G+ ++V N+++
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
MY K A +FD +SER+LISW ++I+G ++G +A+ F++ L G+ D
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 364 LATVIDGC-SVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGF 422
+ +V+ S+ L L Q+H AIK +SD + TAL+D Y++ +K A +L +
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH 478
Query: 423 SCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR 482
+ A +NA+++G+ + + D + LF+ G D T + + + +
Sbjct: 479 NFDLVA-WNAMMAGYTQ--SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 483 GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
G+ +HAY+IK+GY D+ V + ++ MY KCG + A F I D V+W M+S
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQA--CIYSGLSEGGICLFNEIEQIYGLRPI 600
+G + A +F +M+ G PD+ +I + +A C+ + L +G N ++ P
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL-TALEQGRQIHANALKLNCTNDPF 654
Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKL-MANSKFSILASKRL 659
+ +VD+ + G + +A L LV +++ + +
Sbjct: 655 VG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMN 694
L ++P D +FI V + + G++ EA K +M+
Sbjct: 713 LGIKP-DKVTFIGVLSACSHSGLVSEAYKHMRSMH 746
Score = 162 bits (411), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 150/618 (24%), Positives = 276/618 (44%), Gaps = 53/618 (8%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
W ++ +I S DL LG+ HA +L + F NNLI++Y+K L A+++FD M
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 121 VRSAITWTSLIKGYLDDGD--YESVLG--IACDMYRSEEKFNEH-TCSVILEACSLLEDR 175
R ++W S++ Y + E++ + + R + + T S +L+ C L
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC-LHSGY 160
Query: 176 IFG-EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
++ E H +A K G + + FV +L+++Y G +E + +F + Y+DV N M+
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
Y + G E A + SS PN+ T + ++ G G V+
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL-------------ARISGDDSDAGQVKS 267
Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
+ GN DA S +I +S Y+ SG + F + ++
Sbjct: 268 FANGN-------------------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
+ CD ++ +L LG Q+H A+K G + + +L+++Y K
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADD--EEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
AR + D S + +N++++G IA + E + + LF Q G++PD T + +L
Sbjct: 369 ARTVFDNMSERDLISWNSVIAG----IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 473 LSAS-QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
++S L + +H ++IK +D V ALI Y++ + A +F+ + D+V
Sbjct: 425 AASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLV 483
Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEGGICLFNE 590
+WNAM++ Y G L LF M ++G DD ++ V + C + +++G
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 591 IEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMAN 648
I+ Y L + + ++D+ + G +S A +S P + + W T++S +
Sbjct: 544 IKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPDD-VAWTTMISGCIENGEEE 600
Query: 649 SKFSILASKRLLDLEPKD 666
F + + RL+ + P +
Sbjct: 601 RAFHVFSQMRLMGVLPDE 618
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 169/359 (47%), Gaps = 8/359 (2%)
Query: 74 LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
L L + VH +K + +D+F + LI+ Y++ + A+ LF+ + W +++ G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAG 491
Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
Y D L + M++ E+ ++ T + + + C L G+Q+HA+AIKSG++ +
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
++V + ++ MY G A+ F + D MI + GE E AFHVF +
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
P+++T + +E+G+Q+H A+K + VG ++V MY K G ++
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671
Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS- 372
A +F I N+ +W A++ G + G G + + F + LGI D V+ CS
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731
Query: 373 ---VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
V + +HG +G ++ + L D + G +K A L++ S + +A
Sbjct: 732 SGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASA 787
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/673 (30%), Positives = 362/673 (53%), Gaps = 6/673 (0%)
Query: 72 GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
+L LG VHA +K G ++ + ++L+++Y+K +++ A K+F+ + ++ + W ++I
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
+GY +G+ V+ + DM S ++ T + +L C+ D G Q H+ IK
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
N+FVG +L+ MY G +A +F + +D N +I Y + AF +F +
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
+ + + C G+ +GKQ+H L+VK G+ R++ G++++ MY K G+
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
++A ++F ++ E +++S ALI+GY ++ + +A+ F E L G+ AT+++ C
Sbjct: 581 KDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Query: 372 SVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSC-KYTAE 429
+L LG Q HG K G+ S+ LG +L+ +Y + A L S K
Sbjct: 640 HKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVL 699
Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
+ ++SG + E+ + + + R G+ PD TF +L + + + L GR++H+
Sbjct: 700 WTGMMSGHSQN--GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSL 757
Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKG 548
+ D + N LI MYAKCG + G+ Q+F + R ++VSWN++++ YA +G +
Sbjct: 758 IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAED 817
Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
AL +F+ M++ PD+I+ LGVL AC ++G G +F + YG+ ++H ACMV
Sbjct: 818 ALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMV 877
Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
DLLGR G L EA + I + LW +L+ ++ + +++++L++LEP+++
Sbjct: 878 DLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSS 937
Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEE 728
+++L+SN+YA QG ++A +R M D + K G SWI+++ + H F A K H E +
Sbjct: 938 AYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGK 997
Query: 729 IYSKLDLLNDEMK 741
I L+ L D MK
Sbjct: 998 IEMFLEDLYDLMK 1010
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/521 (29%), Positives = 261/521 (50%), Gaps = 11/521 (2%)
Query: 71 SGDLKLGQAVHAFLL-----KSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI 125
SG +K G A L+ G + D +IN Y + +L A+ LF M +
Sbjct: 234 SGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVV 293
Query: 126 TWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFA 185
W +I G+ G + +M +S K T +L A ++ + G +HA A
Sbjct: 294 AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA 353
Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
IK G +N++VG+SL+SMY A VF L K+ N MI Y GES
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
+F+ + SS + +D+TFT+++S C + +E G Q H + +K + + + VGNA+V MY
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
K G E+A ++F+ + +R+ ++W +I YV+ + +A + F GI D +CLA
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA 533
Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
+ + C+ L G Q+H ++K G D+ G++L+D+Y+K G +K AR +
Sbjct: 534 STLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
NA+++G+ + ++ E+ +VLF + G+ P +TF+ ++ L G
Sbjct: 594 SVVSMNALIAGYSQ---NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 486 LHAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSAYALH 543
H K G++++ +G +L+ MY + A +F +S + IV W M+S ++ +
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 544 GLGKGALLLFEEMKREGFAPDDISILGVLQAC-IYSGLSEG 583
G + AL ++EM+ +G PD + + VL+ C + S L EG
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/579 (27%), Positives = 269/579 (46%), Gaps = 58/579 (10%)
Query: 57 LFNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
+F++ PQ + ++ L++G+AVH+ L G ++ N +++LYAK ++ A+K F
Sbjct: 64 VFDEMPQRLALA-----LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF 118
Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
D L + W S++ Y G VL ++ ++ N+ T S++L C+ +
Sbjct: 119 D-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVE 177
Query: 177 FGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYN 236
FG QIH IK G E N + G +L+ MY +A VF + + C + Y
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYV 237
Query: 237 KAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS 296
KAG E A VF + P+ F VI+
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT--------------------------- 270
Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
Y + G ++A +F +S ++++W +ISG+ + G AI F
Sbjct: 271 --------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSS 322
Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
+ S L +V+ + +NL+LGL +H AIK G S++ +G++LV +Y+K +++A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
+ + K +NA++ G+ + VM LF + +G D TF+ LLS A+
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHN--GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
L G H+ IK A ++ VGNAL+ MYAKCG+++ A QIF+ + DRD V+WN +
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY-SGLSEGGICLFNEIEQIY 595
+ +Y A LF+ M G D + L+AC + GL +G +Q++
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG--------KQVH 552
Query: 596 ------GLRPILEHFACMVDLLGRAGRLSEAMNLINSSP 628
GL L + ++D+ + G + +A + +S P
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 221/493 (44%), Gaps = 47/493 (9%)
Query: 148 CDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHS 207
C +++S + F+E + L RI G+ +H+ ++ G ++ +G +++ +Y
Sbjct: 56 CKLFKSRKVFDEMPQRLALAL------RI-GKAVHSKSLILGIDSEGRLGNAIVDLYAKC 108
Query: 208 GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVI 267
AE F L KDV N M+ Y+ G+ FV L + PN +TF+ V+
Sbjct: 109 AQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVL 167
Query: 268 SVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLI 327
S C VE G+Q+H +K G+ R G A+V MY K +A R+F+ I + N +
Sbjct: 168 STCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTV 227
Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
WT L SGYV++G +A+ F D G D TVI
Sbjct: 228 CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI------------------- 268
Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEED 447
+ Y + G LK AR+L S +N ++SG ++ E
Sbjct: 269 ----------------NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC--ETV 310
Query: 448 VMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALIT 507
+ F R + ++ T +LS A L G +HA +IK G A+++ VG++L++
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 508 MYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDIS 567
MY+KC ++ A ++F+ + +++ V WNAM+ YA +G + LF +MK G+ DD +
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 568 ILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSS 627
+L C S E G F+ I L L +VD+ + G L +A +
Sbjct: 431 FTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 628 PFSESPLLWRTLV 640
+ W T++
Sbjct: 490 C-DRDNVTWNTII 501
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 205/658 (31%), Positives = 353/658 (53%), Gaps = 6/658 (0%)
Query: 80 VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
+ +FL+KSG D + LI+ Y K +D A+ +FD + +S +TWT++I G + G
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
L + + + + S +L ACS+L G+QIHA ++ G E + +
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289
Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
LI Y G A +F G+ K++ ++ Y + + A +F + +P+
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
Y +++++ C + G Q+H +K + + V N+++ MY K +A ++FD
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVID---GCSVCSN 376
+ +++ + A+I GY R G + F D+ L T + + ++
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTS 469
Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
L L Q+HG K+G D+ G+AL+D+Y+ LK +R++ D K +N++ +G
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG 529
Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
++++ + E+ + LF + +L+ PD TF+ +++ + + A + G+ H +K G
Sbjct: 530 YVQQ--SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
+ + NAL+ MYAKCGS + A + F + RD+V WN+++S+YA HG GK AL + E+M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
EG P+ I+ +GVL AC ++GL E G+ F E+ +G+ P EH+ CMV LLGRAGR
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQF-ELMLRFGIEPETEHYVCMVSLLGRAGR 706
Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
L++A LI P + ++WR+L+S N + + A++ + +PKD+GSF ++SN+
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNI 766
Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
YA +GM EA KVR M + KE G SWI I+ ++H F++ K H ++ +IY LD
Sbjct: 767 YASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLD 824
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 263/521 (50%), Gaps = 8/521 (1%)
Query: 60 DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
++ +L+++ L VH ++ G + DT+ +N LINLY++ + A+K+F+ M
Sbjct: 46 EFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM 105
Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS-EEKFNEHTCSVILEACSLLEDR--- 175
R+ ++W++++ G YE L + + +R+ ++ NE+ S ++ACS L+ R
Sbjct: 106 PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW 165
Query: 176 -IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILE 234
+F Q+ +F +KSGF+ +V+VGT LI Y G A VF L K MI
Sbjct: 166 MVF--QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG 223
Query: 235 YNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVRE 294
K G S ++ +F L+ + P+ Y + V+S C +E GKQ+H +++G+ +
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283
Query: 295 ISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
S+ N ++ Y K G A ++F+ + +N+ISWT L+SGY ++ +A+ F
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
G+ D ++++ C+ L G Q+H + IK +D + +L+D+YAK L
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDE-EDVMVLFSQQRLAGMEPDPVTFSRLLSL 473
AR + D F+ FNA++ G+ E + + +F R + P +TF LL
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
SAS L + +H K G D+ G+ALI +Y+ C + + +F + +D+V W
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
N+M + Y + AL LF E++ PD+ + ++ A
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA 564
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 182/367 (49%), Gaps = 4/367 (1%)
Query: 74 LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
L G VHA+ +K+ ND++ N+LI++YAK + L A+K+FD + + ++I+G
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 134 YLDDG---DYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
Y G + L I DM + + T +L A + L +QIH K G
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
++F G++LI +Y + C +++ VF + KD+ N M Y + E+E A ++F+
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
L S P+++TF N+++ V+ G++ H +K G+ + NA++ MY K G
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
E+A + FD+ + R+++ W ++IS Y G G KA+ + + GI + V+
Sbjct: 606 PEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSA 665
Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA-E 429
CS +E GL+ ++ G + +V + + G L AR L++ K A
Sbjct: 666 CSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 430 FNAILSG 436
+ ++LSG
Sbjct: 726 WRSLLSG 732
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 1/279 (0%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
L++ S L L + +H + K G D F + LI++Y+ L ++ +FD M V+
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
+ W S+ GY+ + E L + ++ S E+ +E T + ++ A L G++ H
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
+K G E N ++ +L+ MY G +A F A +DV C N +I Y GE +
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKK 639
Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
A + ++S EPN TF V+S C VE+G + L ++FG+ E +V+
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVS 699
Query: 304 MYGKHGMSEEAERMFDAISER-NLISWTALISGYVRSGH 341
+ G+ G +A + + + + I W +L+SG ++G+
Sbjct: 700 LLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN 738
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 209/645 (32%), Positives = 350/645 (54%), Gaps = 6/645 (0%)
Query: 94 FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRS 153
F+ N+ + L A+++FD M ++WTS+IK Y+ + + L + M
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 154 EEKFNEHTC--SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
+ + T SV+L+AC + +GE +HA+A+K+ ++V+VG+SL+ MY G
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
++ VF + +++ +I AG + F + S+ + YTF + C
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
V+ GK +H + G V + V N++ TMY + G ++ +F+ +SER+++SWT+
Sbjct: 221 GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS 280
Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
LI Y R G KA+ F++ + + + A++ C+ S L G QLH + G
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 392 YLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVL 451
+ + +++ +Y+ G+L SA +L G C+ ++ I+ G+ + A E+
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQ--AGFGEEGFKY 398
Query: 452 FSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAK 511
FS R +G +P + LLS+S + A + GR +HA ++ G + V ++LI MY+K
Sbjct: 399 FSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSK 458
Query: 512 CGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
CGSI A IF G +DR DIVS AM++ YA HG K A+ LFE+ + GF PD ++ +
Sbjct: 459 CGSIKEASMIF-GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFIS 517
Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFS 630
VL AC +SG + G FN +++ Y +RP EH+ CMVDLL RAGRLS+A +IN +
Sbjct: 518 VLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWK 577
Query: 631 ESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVR 690
+ ++W TL+ K + + A++R+L+L+P A + + ++N+Y+ G L+EAA VR
Sbjct: 578 KDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVR 637
Query: 691 TTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDL 735
M + KE G S I+I + FV+ + HP+SE+IY+ L+L
Sbjct: 638 KNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILEL 682
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 206/402 (51%), Gaps = 2/402 (0%)
Query: 71 SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
S ++ G+++HA+ +K+ + + ++L+++Y + ++D + ++F M R+A+TWT++
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI 180
Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
I G + G Y+ L +M RSEE + +T ++ L+AC+ L +G+ IH I GF
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240
Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
+ V SL +MY G ++ +F ++ +DV +I+ Y + G+ A F+
Sbjct: 241 VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIK 300
Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
+ +S PN+ TF ++ S C + G+QLH + G+ +SV N+++ MY G
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 360
Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
A +F + R++ISW+ +I GY ++G G + F G LA+++
Sbjct: 361 LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSV 420
Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
+ +E G Q+H A+ G + + ++L+++Y+K G +K A M+
Sbjct: 421 SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL 480
Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
A+++G+ E ++ + LF + G PD VTF +L+
Sbjct: 481 TAMINGYAEH--GKSKEAIDLFEKSLKVGFRPDSVTFISVLT 520
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 177/365 (48%), Gaps = 7/365 (1%)
Query: 65 VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
+K G +K G+A+H ++ G AN+L +Y + + LF+ M R
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
++WTSLI Y G + M S+ NE T + + AC+ L ++GEQ+H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 185 AIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMA 244
+ G +++ V S++ MY G A +F+G+ +D+ + +I Y +AG E
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 245 FHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTM 304
F F + S +P D+ +++SV +E G+Q+H LA+ FG+ + +V ++++ M
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
Y K G +EA +F +++S TA+I+GY G +AI+ F + L +G DS
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGT----ALVDIYAKGGDLKSARMLLD 420
+V+ C+ L+LG ++ Y ++R +VD+ + G L A +++
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNM-MQETY--NMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 421 GFSCK 425
S K
Sbjct: 573 EMSWK 577
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
L+ +S ++ G+ VHA L G + ++ ++LIN+Y+K + A +F
Sbjct: 417 LLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDD 476
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV----ILEACS 170
++ T++I GY + G + A D++ K SV +L AC+
Sbjct: 477 IVSLTAMINGYAEHGKSKE----AIDLFEKSLKVGFRPDSVTFISVLTACT 523
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 349 bits (896), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 213/637 (33%), Positives = 346/637 (54%), Gaps = 15/637 (2%)
Query: 74 LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
L+ G+ V A ++K G++ D F +++LYAK + A ++F + S ++WT ++ G
Sbjct: 267 LRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
Y D S L I +M S + N T + ++ AC Q+HA+ KSGF +
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385
Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVR---CVNFMILEYNKAGESEMAFHVFVH 250
V +LISMY SG +E VF L D++ VN MI ++++ + A +F
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQVFEDL--DDIQRQNIVNVMITSFSQSKKPGKAIRLFTR 443
Query: 251 LLSSDFEPNDYTFTNVISV--CYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
+L ++++ +++SV C NLG KQ+HG +K G+V +++VG+++ T+Y K
Sbjct: 444 MLQEGLRTDEFSVCSLLSVLDCL-NLG----KQVHGYTLKSGLVLDLTVGSSLFTLYSKC 498
Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
G EE+ ++F I ++ W ++ISG+ G+ +AI F E LD G D S LA V+
Sbjct: 499 GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVL 558
Query: 369 DGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTA 428
CS +L G ++HG+ ++ G + LG+ALV++Y+K G LK AR + D
Sbjct: 559 TVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPV 618
Query: 429 EFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
++++SG+ + +D +LF ++G D S +L +A G +HA
Sbjct: 619 SCSSLISGYSQH--GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676
Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
Y K G + VG++L+TMY+K GSID + F I+ D+++W A++++YA HG
Sbjct: 677 YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANE 736
Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
AL ++ MK +GF PD ++ +GVL AC + GL E N + + YG+ P H+ CMV
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMV 796
Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
D LGR+GRL EA + IN+ L+W TL++ K+ + +A+K+ ++LEP DAG
Sbjct: 797 DALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAG 856
Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
++I +SN+ A G DE + R M + KE G S
Sbjct: 857 AYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 241/485 (49%), Gaps = 7/485 (1%)
Query: 92 DTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMY 151
D F +L++ Y+ + A KLFD + ++ +I GY +E L M+
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 152 RSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR 211
+ NE + ++ ACS L+ +F E + IK G+ V ++LI ++ + F
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
+A VFR +V C N +I + F +F + +P+ YT+++V++ C
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 272 ENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
+ GK + +K G ++ V AIV +Y K G EA +F I +++SWT
Sbjct: 263 SLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
++SGY +S A+ F E G+ ++ + +VI C S + Q+H + K G
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 392 YLSDVRLGTALVDIYAKGGDLK-SARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMV 450
+ D + AL+ +Y+K GD+ S ++ D + N +++ F + + +
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQ--SKKPGKAIR 439
Query: 451 LFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYA 510
LF++ G+ D + LLS+ CL G+ +H Y++K+G D+ VG++L T+Y+
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496
Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
KCGS++ ++++F+GI +D W +M+S + +G + A+ LF EM +G +PD+ ++
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 571 VLQAC 575
VL C
Sbjct: 557 VLTVC 561
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
++K + S + LG VHA++ K G + ++L+ +Y+KF +D K F +
Sbjct: 658 ILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLEDRIF--G 178
I WT+LI Y G L + M K ++ T +L ACS L+E+ F
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
+ + I+ EN +V ++ SG REAE+ + K V +L K
Sbjct: 778 SMVKDYGIEP--ENRHYV--CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833
Query: 239 -GESEMAFHVFVHLLSSDFEPND----YTFTNVISVCYENLGVEEGKQL 282
GE E+ + + EP+D + +N+++ E VEE ++L
Sbjct: 834 HGEVELGKVAAKKAI--ELEPSDAGAYISLSNILAEVGEWDEVEETRKL 880
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 212/751 (28%), Positives = 379/751 (50%), Gaps = 55/751 (7%)
Query: 48 SVSCSERTLLF------NDWPQ--------LVKISIGSGDLKLGQAVHAFLLKSGSQNDT 93
SVSC T+ F D P+ ++ + + GD G+++H++++K+G + DT
Sbjct: 98 SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDT 157
Query: 94 FEANNLINLYAKFNRL-DVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYR 152
N L+++YAKF + A FDG+ + ++W ++I G+ ++ C M +
Sbjct: 158 LVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK 217
Query: 153 SEEKFNEHTCSVILEACSLLEDRIF---GEQIHAFAI-KSGFENNVFVGTSLISMYFHSG 208
+ N T + +L C+ ++ I G QIH++ + +S + +VFV SL+S Y G
Sbjct: 218 EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277
Query: 209 CFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL-SSDFEPNDYTFTNVI 267
EA ++F + KD+ N +I Y E AF +F +L+ D P+ T +++
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 268 SVCYENLGVEEGKQLHGLAVKFG-VVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
VC + + GK++H ++ ++ + SVGNA+++ Y + G + A F +S +++
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397
Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
ISW A++ + S + +N L+ I DS + +++ C + ++HG+
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGY 457
Query: 387 AIKHGYLSD---VRLGTALVDIYAKGGDLKSARMLLDGFSCKYT-AEFNAILSGFMEKIA 442
++K G L D +LG AL+D YAK G+++ A + G S + T +N++LSG++ +
Sbjct: 458 SVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGS 517
Query: 443 DDEEDVMV-----------------------------LFSQQRLAGMEPDPVTFSRLLSL 473
D+ ++ +F + + GM P+ VT LL +
Sbjct: 518 HDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPV 577
Query: 474 SASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSW 533
A A L R H Y I+ G D+ + L+ +YAKCGS+ A+ +F+ + RD+V +
Sbjct: 578 CAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMF 636
Query: 534 NAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQ 593
AM++ YA+HG GK AL+++ M PD + I +L AC ++GL + G+ +++ I
Sbjct: 637 TAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRT 696
Query: 594 IYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSI 653
++G++P +E +AC VDL+ R GRL +A + + P + +W TL+
Sbjct: 697 VHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGH 756
Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKL 713
+ LL E D G+ +L+SNMYA + ++R M + K AGCSW+E+D +
Sbjct: 757 SVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQR 816
Query: 714 HHFVASGKDHPESEEIYSKLDLLNDEMKLKV 744
+ FV+ HP + I+ ++ L +MK V
Sbjct: 817 NVFVSGDCSHPRRDSIFDLVNALYLQMKEPV 847
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 268/547 (48%), Gaps = 18/547 (3%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
+VK DL G+A+H + K G + + +++N+YAK R+D QK+F M
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
+ W ++ G E++ + E K + T +++L C L D G+ +H+
Sbjct: 87 PVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHS 146
Query: 184 FAIKSGFENNVFVGTSLISMYFHSG-CFREAENVFRGLAYKDVRCVNFMILEYNKAGESE 242
+ IK+G E + VG +L+SMY G F +A F G+A KDV N +I +++
Sbjct: 147 YIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMA 206
Query: 243 MAFHVFVHLLSSDFEPNDYTFTNVISVCY---ENLGVEEGKQLHGLAVKFGVVR-EISVG 298
AF F +L EPN T NV+ VC +N+ G+Q+H V+ ++ + V
Sbjct: 207 DAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVC 266
Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG-I 357
N++V+ Y + G EEA +F + ++L+SW +I+GY + KA F + G +
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 358 CCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSAR 416
DS + +++ C+ ++L G ++H + ++H Y L D +G AL+ YA+ GD +A
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
S K +NAIL F + + + + L + D VT LL +
Sbjct: 387 WAFSLMSTKDIISWNAILDAFAD--SPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCIN 444
Query: 477 QACLVRGRSLHAYSIKTGYAAD---VIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVS 532
+ + + +H YS+K G D +GNAL+ YAKCG+++ A +IF G+S+ R +VS
Sbjct: 445 VQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVS 504
Query: 533 WNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIE 592
+N++LS Y G A +LF EM + + ++C I +F EI
Sbjct: 505 YNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCC----PNEAIGVFREI- 559
Query: 593 QIYGLRP 599
Q G+RP
Sbjct: 560 QARGMRP 566
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 16/334 (4%)
Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
L S F + F +V+ C + G+ LHG K G + V +++ MY K
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 312 EEAERMFDAISERNLISWTALISGY-VRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
++ ++MF + + + W +++G V G + F D S A V+
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPK-PSSVTFAIVLPL 131
Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDL-KSARMLLDGFSCKYTAE 429
C + G +H + IK G D +G ALV +YAK G + A DG + K
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191
Query: 430 FNAILSGFMEK--IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ----ACLVRG 483
+NAI++GF E +AD ++ + EP+ T + +L + AS AC G
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEP----TEPNYATIANVLPVCASMDKNIACR-SG 246
Query: 484 RSLHAYSIKTGY-AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYAL 542
R +H+Y ++ + V V N+L++ Y + G I+ A +F + +D+VSWN +++ YA
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 543 HGLGKGALLLFEEMKREG-FAPDDISILGVLQAC 575
+ A LF + +G +PD ++I+ +L C
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVC 340
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
L+G D F ++ AS + L GR+LH K G+ A V +++ MYAKC +D
Sbjct: 14 LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73
Query: 517 GAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK-REGFAPDDISILGVLQAC 575
++F+ + D V WN +L+ ++ G+ + F+ M + P ++ VL C
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 576 IYSGLSEGG 584
+ G S G
Sbjct: 133 VRLGDSYNG 141
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 205/676 (30%), Positives = 361/676 (53%), Gaps = 3/676 (0%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
+P ++K G D ++G V+ +L G ++D F N L+++Y++ L A+++FD M
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP 168
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
VR ++W SLI GY G YE L I ++ S + T S +L A L G+
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
+H FA+KSG + V V L++MY +A VF + +D N MI Y K
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
E + +F+ L F+P+ T ++V+ C + K ++ +K G V E +V N
Sbjct: 289 VEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI 347
Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
++ +Y K G A +F+++ ++ +SW ++ISGY++SG +A+ F + + D
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
+I + ++L+ G LH IK G D+ + AL+D+YAK G++ + +
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
T +N ++S + + D + V +Q R + + PD TF L + AS A
Sbjct: 468 SMGTGDTVTWNTVISACV-RFGDFATGLQVT-TQMRKSEVVPDMATFLVTLPMCASLAAK 525
Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
G+ +H ++ GY +++ +GNALI MY+KCG ++ + ++F+ +S RD+V+W M+ AY
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 585
Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPI 600
++G G+ AL F +M++ G PD + + ++ AC +SGL + G+ F +++ Y + P+
Sbjct: 586 GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPM 645
Query: 601 LEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLL 660
+EH+AC+VDLL R+ ++S+A I + P +W +++ + + + + S+R++
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 705
Query: 661 DLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASG 720
+L P D G IL SN YA D+ + +R ++ D ++K G SWIE+ +H F +
Sbjct: 706 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGD 765
Query: 721 KDHPESEEIYSKLDLL 736
P+SE IY L++L
Sbjct: 766 DSAPQSEAIYKSLEIL 781
Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 266/515 (51%), Gaps = 4/515 (0%)
Query: 62 PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM-L 120
P + + S +L + +HA ++ G + F + LI+ Y+ F + +F +
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
++ W S+I+ + +G + L + S+ +++T +++AC+ L D G+
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
++ + GFE+++FVG +L+ MY G A VF + +D+ N +I Y+ G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
E A ++ L +S P+ +T ++V+ L V++G+ LHG A+K GV + V N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
+V MY K +A R+FD + R+ +S+ +I GY++ +++ FLE LD D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPD 306
Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
+++V+ C +L L ++ + +K G++ + + L+D+YAK GD+ +AR + +
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
CK T +N+I+SG+++ + D + M LF + + D +T+ L+S+S A L
Sbjct: 367 SMECKDTVSWNSIISGYIQ--SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAY 540
G+ LH+ IK+G D+ V NALI MYAKCG + + +IF + D V+WN ++SA
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 541 ALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
G L + +M++ PD + L L C
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 468 SRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
SR LS S++ L R +HA I G + LI Y+ + +F+ +S
Sbjct: 11 SRALSSSSN---LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 528 -RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGL--SEGG 584
+++ WN+++ A++ +GL AL + +++ +PD + V++AC +GL +E G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMG 125
Query: 585 ICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
++ +I + G L +VD+ R G L+ A + + P + + W +L+S
Sbjct: 126 DLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL-VSWNSLIS 180
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 345 bits (885), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 203/656 (30%), Positives = 349/656 (53%), Gaps = 12/656 (1%)
Query: 105 KFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSV 164
KF+ A+++F M RS W +L+K + +E VL M+R EEK + T V
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 165 ILEACSLLEDRIFGEQIHAFAIKS-GFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
L+AC L + +GE IH F K ++++VG+SLI MY G EA +F L
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHL-LSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
D+ + M+ + K G A F + ++SD P+ T ++S C + G+ +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
HG ++ G ++S+ N+++ Y K +EA +F I+E+++ISW+ +I+ YV++G
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
+A+ F + +D G + + + V+ C+ +LE G + H AI+ G ++V++ TAL
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF----MEKIADDEEDVMVLFSQQRLA 458
VD+Y K + A + K + A++SGF M + +E +M+L + R
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR-- 363
Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
PD + ++L + L + + H+Y IK G+ ++ +G +L+ +Y++CGS+ A
Sbjct: 364 ---PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM-KREGFAPDDISILGVLQACIY 577
++F GI+ +D V W ++++ Y +HG G AL F M K P++++ L +L AC +
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
+GL G+ +F + Y L P LEH+A +VDLLGR G L A+ + PFS +P +
Sbjct: 481 AGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILG 540
Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
TL+ ++ N + + +K+L +LE AG ++L+SN+Y +G + K+R ++
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRG 600
Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMKLKVKDSSAFELQ 753
+ K S IEI K+H FVA + HPE E +Y L L+ MK +++ FE +
Sbjct: 601 IKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDLENCVYFEYE 656
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 234/456 (51%), Gaps = 7/456 (1%)
Query: 73 DLKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
++ G+ +H F+ K + +D + ++LI +Y K R+ A ++FD + +TW+S++
Sbjct: 75 EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134
Query: 132 KGYLDDGD-YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
G+ +G Y++V + S+ + T ++ AC+ L + G +H F I+ GF
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194
Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
N++ + SL++ Y S F+EA N+F+ +A KDV + +I Y + G + A VF
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
++ EPN T V+ C +E+G++ H LA++ G+ E+ V A+V MY K
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314
Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGF-LEFLDLGICCDSSCLATVID 369
EEA +F I ++++SW ALISG+ +G ++I F + L+ D+ + V+
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374
Query: 370 GCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
CS LE H + IK+G+ S+ +G +LV++Y++ G L +A + +G + K T
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434
Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQ-RLAGMEPDPVTFSRLLSLSASQACLVRGRSLHA 488
+ ++++G+ I + F+ + + ++P+ VTF +LS + + G +
Sbjct: 435 WTSLITGY--GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492
Query: 489 YSIKTGYAADVIVGNA-LITMYAKCGSIDGAFQIFK 523
+ A + A L+ + + G +D A +I K
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 528
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 72 GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
G L+ + H++++K G ++ F +L+ LY++ L A K+F+G+ ++ + WTSLI
Sbjct: 380 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 439
Query: 132 KGYLDDGDYESVLGIACDMYRSEE-KFNEHTCSVILEACS---LLED--RIFGEQIHAFA 185
GY G L M +S E K NE T IL ACS L+ + RIF ++ +
Sbjct: 440 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYR 499
Query: 186 IKSGFEN 192
+ E+
Sbjct: 500 LAPNLEH 506
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 207/682 (30%), Positives = 371/682 (54%), Gaps = 19/682 (2%)
Query: 72 GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
GDLK G +H F SG + +N ++ +Y K R D A +F+ ++ ++W +++
Sbjct: 90 GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL 149
Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
G+ D+ + L M + F+ T S L C E + G Q+ + +K+G E
Sbjct: 150 SGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLE 206
Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM-AFHVFVH 250
+++ VG S I+MY SG FR A VF +++KD+ N ++ ++ G A +F
Sbjct: 207 SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRD 266
Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
++ E + +FT+VI+ C ++ +Q+HGL +K G + VGN +++ Y K G+
Sbjct: 267 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 326
Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
E + +F +SERN++SWT +IS + A++ FL G+ + +I+
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINA 381
Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
++ GL++HG IK G++S+ +G + + +YAK L+ A+ + + + +
Sbjct: 382 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441
Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA--SQACLVRGRSLHA 488
NA++SGF + E M L + A P+ TF +L+ A + +G+ HA
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAA---AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHA 498
Query: 489 YSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKG 548
+ +K G + +V +AL+ MYAK G+ID + ++F +S ++ W +++SAY+ HG +
Sbjct: 499 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 558
Query: 549 ALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMV 608
+ LF +M +E APD ++ L VL AC G+ + G +FN + ++Y L P EH++CMV
Sbjct: 559 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 618
Query: 609 DLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG 668
D+LGRAGRL EA L++ P + ++++ +L N K ++ ++++P+ +G
Sbjct: 619 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 678
Query: 669 SFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEI-DSK----LHHFVASGKDH 723
S++ + N+YA + D+AA++R M +SKEAG SWI++ D++ + F + K H
Sbjct: 679 SYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSH 738
Query: 724 PESEEIYSKLDLLNDEMKLKVK 745
P+S+EIY ++++ EM L+ K
Sbjct: 739 PKSDEIYRMVEIIGLEMNLEGK 760
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/595 (26%), Positives = 295/595 (49%), Gaps = 31/595 (5%)
Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSE-------EKFNEHTCS 163
+A KLFDG R+A T+ I + + + A +++ +E T
Sbjct: 26 IAHKLFDGSSQRNA---TTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLC 82
Query: 164 VILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK 223
+ L+AC D G QIH F+ SGF + V V +++ MY +G F A +F L
Sbjct: 83 LALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP 140
Query: 224 DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLH 283
DV N ++ ++ ++++A + V + S+ + +T++ +S C + G G QL
Sbjct: 141 DVVSWNTILSGFD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197
Query: 284 GLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG-HG 342
VK G+ ++ VGN+ +TMY + G A R+FD +S +++ISW +L+SG + G G
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFG 257
Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
+A+ F + + G+ D +VI C ++L+L Q+HG IK GY S + +G L
Sbjct: 258 FEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNIL 317
Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
+ Y+K G L++ + + S + + + I+ +++D + +F R G+ P
Sbjct: 318 MSRYSKCGVLEAVKSVFHQMSERNVVSWTTM-------ISSNKDDAVSIFLNMRFDGVYP 370
Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
+ VTF L++ + G +H IKTG+ ++ VGN+ IT+YAK +++ A + F
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAF 430
Query: 523 KGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS---G 579
+ I+ R+I+SWNAM+S +A +G AL +F E P++ + VL A ++
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDIS 489
Query: 580 LSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTL 639
+ +G C + ++ P++ + ++D+ + G + E+ + N ++ +W ++
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSI 546
Query: 640 VSVSKLMANSKFSI-LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
+S + + + L K + + D +F+ V +GM+D+ ++ M
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 214/427 (50%), Gaps = 18/427 (4%)
Query: 69 IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWT 128
+GS LG + + ++K+G ++D N+ I +Y++ A+++FD M + I+W
Sbjct: 185 VGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWN 244
Query: 129 SLIKGYLDDGD--YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
SL+ G +G +E+V+ I DM R + + + + ++ C D QIH I
Sbjct: 245 SLLSGLSQEGTFGFEAVV-IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI 303
Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
K G+E+ + VG L+S Y G ++VF ++ ++V MI + + A
Sbjct: 304 KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVS 358
Query: 247 VFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYG 306
+F+++ PN+ TF +I+ N ++EG ++HGL +K G V E SVGN+ +T+Y
Sbjct: 359 IFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYA 418
Query: 307 KHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLAT 366
K E+A++ F+ I+ R +ISW A+ISG+ ++G +A+ FL + +
Sbjct: 419 KFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGS 477
Query: 367 VIDGCSVCSNLEL--GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
V++ + ++ + G + H +K G S + +AL+D+YAK G++ + + + S
Sbjct: 478 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
K + +I+S + D E VM LF + + PD VTF LS AC +G
Sbjct: 538 KNQFVWTSIISAYSSH--GDFETVMNLFHKMIKENVAPDLVTF-----LSVLTACNRKGM 590
Query: 485 SLHAYSI 491
Y I
Sbjct: 591 VDKGYEI 597
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/689 (29%), Positives = 364/689 (52%), Gaps = 5/689 (0%)
Query: 58 FNDWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFD 117
+ +P L+K D++ G +H+ L+K G + F N L+++YAK + L A++LFD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 118 GMLVR-SAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRI 176
G + A+ W S++ Y G L + +M+ + N +T L AC
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 177 FGEQIHAFAIKSGFENN-VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
G++IHA +KS ++ ++V +LI+MY G +AE + R + DV N +I Y
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI 295
+ + A F ++++ + ++ + T++I+ + G +LH +K G +
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 296 SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDL 355
VGN ++ MY K ++ R F + +++LISWT +I+GY ++ +A+ F +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
+ D L +++ SV ++ + ++H ++ G L D + LVD+Y K ++ A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYA 540
Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
+ + K + +++S + +E + + LF + G+ D V +LS +A
Sbjct: 541 TRVFESIKGKDVVSWTSMISS--SALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
S + L +GR +H Y ++ G+ + + A++ MYA CG + A +F I + ++ + +
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
M++AY +HG GK A+ LF++M+ E +PD IS L +L AC ++GL + G +E Y
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
L P EH+ C+VD+LGRA + EA + + +W L++ + + + +A
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778
Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
++RLL+LEPK+ G+ +LVSN++A QG ++ KVR M + K GCSWIE+D K+H
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHK 838
Query: 716 FVASGKDHPESEEIYSKLDLLNDEMKLKV 744
F A K HPES+EIY KL + +++ +V
Sbjct: 839 FTARDKSHPESKEIYEKLSEVTRKLEREV 867
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 253/499 (50%), Gaps = 8/499 (1%)
Query: 77 GQAVHAFLLKS-GSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
G+ +H+ + K+ S F A L+ +Y K LD A+K+FD M R+A W ++I Y+
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
+G+ S L + +M + +L+AC+ L D G ++H+ +K G+ + F
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218
Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
+ +L+SMY + A +F G K D N ++ Y+ +G+S +F + +
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278
Query: 255 DFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHGMSEE 313
PN YT + ++ C + GK++H +K E+ V NA++ MY + G +
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338
Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
AER+ ++ ++++W +LI GYV++ +A+ F + + G D + ++I
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGG-DLKSARMLLDGFSCKYTAEFNA 432
SNL G++LH + IKHG+ S++++G L+D+Y+K R L K +
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD-KDLISWTT 457
Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
+++G+ + D + + LF ME D + +L S+ ++ + +H + ++
Sbjct: 458 VIAGYAQN--DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 493 TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
G D ++ N L+ +Y KC ++ A ++F+ I +D+VSW +M+S+ AL+G A+ L
Sbjct: 516 KGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 553 FEEMKREGFAPDDISILGV 571
F M G + D +++L +
Sbjct: 575 FRRMVETGLSADSVALLCI 593
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 162/315 (51%), Gaps = 5/315 (1%)
Query: 263 FTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS-VGNAIVTMYGKHGMSEEAERMFDAI 321
F V+ +C + V +G+QLH K E+ + +V MYGK G ++AE++FD +
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGL 381
+R +W +I YV +G A+ + G+ S ++ C+ ++ G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 382 QLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-FNAILSGFMEK 440
+LH +K GY S + ALV +YAK DL +AR L DGF K A +N+ILS +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY--S 260
Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG-YAADV 499
+ + + LF + + G P+ T L+ + G+ +HA +K+ +++++
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 500 IVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKRE 559
V NALI MY +CG + A +I + +++ D+V+WN+++ Y + + K AL F +M
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 560 GFAPDDISILGVLQA 574
G D++S+ ++ A
Sbjct: 381 GHKSDEVSMTSIIAA 395
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Query: 455 QRLAGMEPD-PV-TFSRLLSLSASQACLVRGRSLHAYSIKT--GYAADVIVGNALITMYA 510
QRL E + PV F+ +L L + + +GR LH+ KT + D + G L+ MY
Sbjct: 69 QRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYG 127
Query: 511 KCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILG 570
KCGS+D A ++F + DR +WN M+ AY +G AL L+ M+ EG S
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 571 VLQAC 575
+L+AC
Sbjct: 188 LLKAC 192
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 343 bits (879), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/683 (31%), Positives = 353/683 (51%), Gaps = 10/683 (1%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
L + + SG + LG+ H ++KS + NNL+N+Y K L A++LFD M R+
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
I++ SLI GY G YE + + + + K ++ T + L C D GE +H
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
+ +G VF+ LI MY G +A ++F +D N +I Y + G +E
Sbjct: 173 LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLG---VEEGKQLHGLAVKFGVVREISVGNA 300
++ + Y +V+ C NL +E+G +H K G+ +I V A
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA 292
Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH-----GGKAINGFLEFLDL 355
++ MY K+G +EA ++F + +N++++ A+ISG+++ +A F++
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 356 GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA 415
G+ S + V+ CS LE G Q+H K+ + SD +G+AL+++YA G +
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDG 412
Query: 416 RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSA 475
S + A + +++ ++ + E LF Q + + P+ T S ++S A
Sbjct: 413 MQCFASTSKQDIASWTSMIDCHVQN--EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Query: 476 SQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNA 535
A L G + Y+IK+G A V + I+MYAK G++ A Q+F + + D+ +++A
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 536 MLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIY 595
M+S+ A HG AL +FE MK G P+ + LGVL AC + GL G+ F ++ Y
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDY 590
Query: 596 GLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILA 655
+ P +HF C+VDLLGR GRLS+A NLI SS F + P+ WR L+S ++ +S
Sbjct: 591 RINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRV 650
Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
++RL++LEP+ +GS++L+ N+Y G+ A +VR M D + KE SWI I ++ H
Sbjct: 651 AERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHS 710
Query: 716 FVASGKDHPESEEIYSKLDLLND 738
F + HP S+ IY+ L+ +++
Sbjct: 711 FAVADLSHPSSQMIYTMLETMDN 733
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 340 bits (872), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 327/633 (51%), Gaps = 67/633 (10%)
Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR------------------------ 211
I+ +HA IKSGF N +F+ LI Y G
Sbjct: 37 IYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96
Query: 212 -------EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFT 264
EA+++FR + +D N M+ + + E A F + F N+Y+F
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 265 NVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
+V+S C + +G Q+H L K + ++ +G+A+V MY K G +A+R+FD + +R
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
N++SW +LI+ + ++G +A++ F L+ + D LA+VI C+ S +++G ++H
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 385 GFAIKHGYL-SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF------ 437
G +K+ L +D+ L A VD+YAK +K AR + D + +++SG+
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 438 ------MEKIAD-----------------DEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
K+A+ + E+ + LF + + P +F+ +L
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 475 ASQACLVRGRSLHAYSIKTGYA------ADVIVGNALITMYAKCGSIDGAFQIFKGISDR 528
A A L G H + +K G+ D+ VGN+LI MY KCG ++ + +F+ + +R
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 529 DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLF 588
D VSWNAM+ +A +G G AL LF EM G PD I+++GVL AC ++G E G F
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 589 NEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMAN 648
+ + + +G+ P+ +H+ CMVDLLGRAG L EA ++I P ++W +L++ K+ N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Query: 649 SKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
+++LL++EP ++G ++L+SNMYA G ++ VR +M ++K+ GCSWI+
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
Query: 709 IDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
I H F+ K HP ++I+S LD+L EM+
Sbjct: 637 IQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/537 (26%), Positives = 252/537 (46%), Gaps = 77/537 (14%)
Query: 80 VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG-----Y 134
VHA ++KSG N+ F N LI+ Y+K L+ +++FD M R+ TW S++ G +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 135 LDDGD-------------YESVLGIACDMYRSEEKF-------------NEHTCSVILEA 168
LD+ D + S++ R EE NE++ + +L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 169 CSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV 228
CS L D G Q+H+ KS F ++V++G++L+ MY G +A+ VF + ++V
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 229 NFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVK 288
N +I + + G + A VF +L S EP++ T +VIS C ++ G+++HG VK
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 289 FGVVR-EISVGNAIVTMYGKHGMSEEAERMFDA--------------------------- 320
+R +I + NA V MY K +EA +FD+
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 321 ----ISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
++ERN++SW ALI+GY ++G +A++ F +C A ++ C+ +
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 377 LELGLQLHGFAIKHGYL------SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
L LG+Q H +KHG+ D+ +G +L+D+Y K G ++ ++ + +
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
NA++ GF + +E + LF + +G +PD +T +LS + GR H +S
Sbjct: 462 NAMIIGFAQNGYGNE--ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFS 517
Query: 491 IKT---GYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALH 543
T G A ++ + + G ++ A + + + D V W ++L+A +H
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 185/390 (47%), Gaps = 39/390 (10%)
Query: 70 GSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTS 129
G D+ G VH+ + KS +D + + L+++Y+K ++ AQ++FD M R+ ++W S
Sbjct: 164 GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 223
Query: 130 LIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG 189
LI + +G L + M S + +E T + ++ AC+ L G+++H +K+
Sbjct: 224 LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 283
Query: 190 ----------------------------FEN----NVFVGTSLISMYFHSGCFREAENVF 217
F++ NV TS+IS Y + + A +F
Sbjct: 284 KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 343
Query: 218 RGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYE----N 273
+A ++V N +I Y + GE+E A +F L P Y+F N++ C + +
Sbjct: 344 TKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELH 403
Query: 274 LGVEEGKQL--HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTA 331
LG++ + HG + G +I VGN+++ MY K G EE +F + ER+ +SW A
Sbjct: 404 LGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNA 463
Query: 332 LISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHG 391
+I G+ ++G+G +A+ F E L+ G D + V+ C +E G +
Sbjct: 464 MIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDF 523
Query: 392 YLSDVRLG-TALVDIYAKGGDLKSARMLLD 420
++ +R T +VD+ + G L+ A+ +++
Sbjct: 524 GVAPLRDHYTCMVDLLGRAGFLEEAKSMIE 553
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 46/217 (21%)
Query: 463 DPVTFSRLL-SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
D F++LL S S+ + R +HA IK+G++ ++ + N LI Y+KCGS++ Q+
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 522 -------------------------------FKGISDRDIVSWNAMLSAYALHGLGKGAL 550
F+ + +RD +WN+M+S +A H + AL
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL---RPILEHF--- 604
F M +EGF ++ S VL AC SGL++ N+ Q++ L P L
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSAC--SGLND-----MNKGVQVHSLIAKSPFLSDVYIG 190
Query: 605 ACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
+ +VD+ + G +++A + + + + W +L++
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLIT 226
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 338 bits (868), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 188/663 (28%), Positives = 351/663 (52%), Gaps = 2/663 (0%)
Query: 74 LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
LK + + + K+G + F L++L+ ++ +D A ++F+ + + + + +++KG
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENN 193
+ D + L M + + + + +L+ C + G++IH +KSGF +
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169
Query: 194 VFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLS 253
+F T L +MY EA VF + +D+ N ++ Y++ G + MA + +
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
Query: 254 SDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEE 313
+ +P+ T +V+ + GK++HG A++ G +++ A+V MY K G E
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289
Query: 314 AERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSV 373
A ++FD + ERN++SW ++I YV++ + +A+ F + LD G+ + + C+
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349
Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
+LE G +H +++ G +V + +L+ +Y K ++ +A + + +NA+
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409
Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
+ GF + D + FSQ R ++PD T+ +++ A + + +H +++
Sbjct: 410 ILGFAQN--GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS 467
Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
+V V AL+ MYAKCG+I A IF +S+R + +WNAM+ Y HG GK AL LF
Sbjct: 468 CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELF 527
Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
EEM++ P+ ++ L V+ AC +SGL E G+ F +++ Y + ++H+ MVDLLGR
Sbjct: 528 EEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGR 587
Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
AGRL+EA + I P + ++ ++ ++ N F+ A++RL +L P D G +L+
Sbjct: 588 AGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLL 647
Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
+N+Y M ++ +VR +M L K GCS +EI +++H F + HP+S++IY+ L
Sbjct: 648 ANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFL 707
Query: 734 DLL 736
+ L
Sbjct: 708 EKL 710
Score = 216 bits (550), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 215/416 (51%), Gaps = 5/416 (1%)
Query: 159 EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFR 218
EH +++LE CS L++ QI K+G F T L+S++ G EA VF
Sbjct: 37 EHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 219 GLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEE 278
+ K + M+ + K + + A FV + D EP Y FT ++ VC + +
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 279 GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVR 338
GK++HGL VK G ++ + MY K EA ++FD + ER+L+SW +++GY +
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 339 SGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRL 398
+G A+ + + + +V+ S + +G ++HG+A++ G+ S V +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
TALVD+YAK G L++AR L DG + +N+++ +++ ++ ++ M++F +
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN--ENPKEAMLIFQKMLDE 331
Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
G++P V+ L A L RGR +H S++ G +V V N+LI+MY KC +D A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQA 574
+F + R +VSWNAM+ +A +G AL F +M+ PD + + V+ A
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/529 (27%), Positives = 262/529 (49%), Gaps = 17/529 (3%)
Query: 60 DWPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
++ L+K+ +L++G+ +H L+KSG D F L N+YAK +++ A+K+FD M
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM 196
Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
R ++W +++ GY +G L + M K + T +L A S L G+
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256
Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
+IH +A++SGF++ V + T+L+ MY G A +F G+ ++V N MI Y +
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
+ A +F +L +P D + + C + +E G+ +H L+V+ G+ R +SV N
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 300 AIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
++++MY K + A MF + R L+SW A+I G+ ++G A+N F + +
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436
Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
D+ +VI + S +HG ++ +V + TALVD+YAK G + AR++
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
D S ++ +NA++ G+ + + LF + + ++P+ VTF ++S + S +
Sbjct: 497 DMMSERHVTTWNAMIDGY--GTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS-ACSHSG 553
Query: 480 LVRGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAM 536
LV Y +K Y+ ++ + + A++ + + G ++ A+ + + V+ + AM
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 537 LSAYALHG----LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLS 581
L A +H K A LFE PDD VL A IY S
Sbjct: 614 LGACQIHKNVNFAEKAAERLFE------LNPDD-GGYHVLLANIYRAAS 655
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 142/299 (47%), Gaps = 14/299 (4%)
Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
CS+L+ Q+ K+G + T LV ++ + G + A + + K ++ +
Sbjct: 47 CSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTM 106
Query: 434 LSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKT 493
L GF + D + + F + R +EP F+ LL + +A L G+ +H +K+
Sbjct: 107 LKGFAK--VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164
Query: 494 GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
G++ D+ L MYAKC ++ A ++F + +RD+VSWN +++ Y+ +G+ + AL +
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHF----ACMVD 609
+ M E P I+I+ VL A L I + EI Y +R + +VD
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRL----ISVGKEIHG-YAMRSGFDSLVNISTALVD 279
Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLD--LEPKD 666
+ + G L A L + + + W +++ N K ++L +++LD ++P D
Sbjct: 280 MYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/607 (31%), Positives = 327/607 (53%), Gaps = 10/607 (1%)
Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF-ENNVFVGT 198
Y +V G + + E N TC L+ C+ +D + G+QIH F ++ GF +++ GT
Sbjct: 41 YSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGT 100
Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
SL++MY G R A VF G + +DV N +I + G A + + ++ P
Sbjct: 101 SLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILP 159
Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
+ YTF +++ + + + + K++HGLA K G + VG+ +VT Y K E+A+++F
Sbjct: 160 DKYTFPSLLKGS-DAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVF 218
Query: 319 DAISERN-LISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
D + +R+ + W AL++GY + A+ F + + G+ + +V+ +V ++
Sbjct: 219 DELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDI 278
Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
+ G +HG A+K G SD+ + AL+D+Y K L+ A + + + +N++L
Sbjct: 279 DNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC-- 336
Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-- 495
+ D + + LF + +G+ PD VT + +L A L +GR +H Y I +G
Sbjct: 337 VHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLN 396
Query: 496 --AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLF 553
+++ + N+L+ MY KCG + A +F + +D SWN M++ Y + G+ AL +F
Sbjct: 397 RKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMF 456
Query: 554 EEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGR 613
M R G PD+I+ +G+LQAC +SG G ++E +Y + P +H+AC++D+LGR
Sbjct: 457 SCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGR 516
Query: 614 AGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILV 673
A +L EA L S P ++P++WR+++S +L N +++A KRL +LEP+ G ++L+
Sbjct: 517 ADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLM 576
Query: 674 SNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
SN+Y G +E VR M + K GCSWI + + +H F + HPE + I+ L
Sbjct: 577 SNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636
Query: 734 DLLNDEM 740
L+ M
Sbjct: 637 SLVISHM 643
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 155/319 (48%), Gaps = 10/319 (3%)
Query: 61 WPQLVKISIGSGDLKLG--QAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDG 118
+P L+K GS ++L + VH K G +D + + L+ Y+KF ++ AQK+FD
Sbjct: 164 FPSLLK---GSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDE 220
Query: 119 MLVRS-AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIF 177
+ R ++ W +L+ GY +E L + M + HT + +L A ++ D
Sbjct: 221 LPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDN 280
Query: 178 GEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNK 237
G IH A+K+G +++ V +LI MY S EA ++F + +D+ N ++ ++
Sbjct: 281 GRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDY 340
Query: 238 AGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREIS- 296
G+ + +F +L S P+ T T V+ C + +G+++HG + G++ S
Sbjct: 341 CGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSS 400
Query: 297 ---VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
+ N+++ MY K G +A +FD++ ++ SW +I+GY G A++ F
Sbjct: 401 NEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMC 460
Query: 354 DLGICCDSSCLATVIDGCS 372
G+ D ++ CS
Sbjct: 461 RAGVKPDEITFVGLLQACS 479
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 335 bits (859), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 212/683 (31%), Positives = 349/683 (51%), Gaps = 63/683 (9%)
Query: 127 WTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAI 186
W SLI+ Y D+G L + M+ + +T + +AC + GE HA ++
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
+GF +NVFVG +L++MY +A VF ++ DV N +I Y K G+ ++A
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 247 VFVHLLSSDF--EPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVT 303
+F ++++F P++ T NV+ C +LG GKQLH AV +++ + VGN +V
Sbjct: 215 MFSR-MTNEFGCRPDNITLVNVLPPC-ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 304 MYGKHGMSEEAERMFDAISERNLISWTAL------------------------------- 332
MY K GM +EA +F +S ++++SW A+
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 333 ----ISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI 388
ISGY + G G +A+ + L GI + L +V+ GC+ L G ++H +AI
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 389 KH-------GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY--TAEFNAILSGFME 439
K+ G+ + + L+D+YAK + +AR + D S K + ++ G+ +
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 440 KIADDEEDVMVLFSQ--QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY-A 496
D + L S+ + P+ T S L AS A L G+ +HAY+++ A
Sbjct: 453 H--GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
+ V N LI MYAKCGSI A +F + ++ V+W ++++ Y +HG G+ AL +F+EM
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
+R GF D +++L VL AC +SG+ + G+ FN ++ ++G+ P EH+AC+VDLLGRAGR
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630
Query: 617 LSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNM 676
L+ A+ LI P P++W +S ++ + A++++ +L GS+ L+SN+
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 677 YAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLL 736
YA G + ++R+ M + K GCSW+E F K HP ++EIY +L
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY---QVL 747
Query: 737 NDEMKLKVKD-----SSAFELQD 754
D M+ ++KD + F L D
Sbjct: 748 LDHMQ-RIKDIGYVPETGFALHD 769
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 234/497 (47%), Gaps = 60/497 (12%)
Query: 198 TSLISMYFHSGCFREAENVFRGLAYKD--VRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
+ LIS Y GC A ++ R D V N +I Y G + ++F + S
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 256 FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
+ P++YTF V C E V G+ H L++ G + + VGNA+V MY + +A
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL-DLGICCDSSCLATVIDGCSVC 374
++FD +S +++SW ++I Y + G A+ F + G D+ L V+ C+
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
LG QLH FA+ + ++ +G LVD+YAK G + A + S K +NA++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 435 SGF------------MEKIADDEEDVMVL--------FSQQRL-------------AGME 461
+G+ EK+ +++ + V+ ++Q+ L +G++
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSI-------KTGYAADVIVGNALITMYAKCGS 514
P+ VT +LS AS L+ G+ +H Y+I K G+ + +V N LI MYAKC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 515 IDGAFQIFKGIS--DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA--PDDISILG 570
+D A +F +S +RD+V+W M+ Y+ HG AL L EM E P+ +I
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 571 VLQACIYSGLSEGGICLFNEIEQIYGLR------PILEHFACMVDLLGRAGRLSEAMNLI 624
L AC S + + +I Y LR P+ C++D+ + G +S+A L+
Sbjct: 483 ALVACA----SLAALRIGKQIHA-YALRNQQNAVPLFVS-NCLIDMYAKCGSISDA-RLV 535
Query: 625 NSSPFSESPLLWRTLVS 641
+ +++ + W +L++
Sbjct: 536 FDNMMAKNEVTWTSLMT 552
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/534 (25%), Positives = 241/534 (45%), Gaps = 78/534 (14%)
Query: 74 LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
++ G++ HA L +G ++ F N L+ +Y++ L A+K+FD M V ++W S+I+
Sbjct: 143 VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIES 202
Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSV-------ILEACSLLEDRIFGEQIHAFAI 186
Y G + +A +M+ NE C +L C+ L G+Q+H FA+
Sbjct: 203 YAKLGKPK----VALEMF--SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFH 246
S N+FVG L+ MY G EA VF ++ KDV N M+ Y++ G E A
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 247 VF-----------------------------------VHLLSSDFEPNDYTFTNVISVCY 271
+F +LSS +PN+ T +V+S C
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 272 ENLGVEEGKQLHGLAVKF-------GVVREISVGNAIVTMYGKHGMSEEAERMFDAIS-- 322
+ GK++H A+K+ G E V N ++ MY K + A MFD++S
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 323 ERNLISWTALISGYVRSGHGGKAINGFLEFL--DLGICCDSSCLATVIDGCSVCSNLELG 380
ER++++WT +I GY + G KA+ E D ++ ++ + C+ + L +G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 381 LQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
Q+H +A+++ + + + L+D+YAK G + AR++ D K + ++++G+
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGY-- 554
Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-----RSLHAYSIKTG 494
+ E+ + +F + R G + D VT +L + + +G R + + G
Sbjct: 555 GMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPG 614
Query: 495 ---YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG 544
YA L+ + + G ++ A ++ + + + V W A LS +HG
Sbjct: 615 PEHYA-------CLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 167/397 (42%), Gaps = 48/397 (12%)
Query: 72 GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAI------ 125
G LG+ +H F + S + F N L+++YAK +D A +F M V+ +
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 126 -----------------------------TWTSLIKGYLDDGDYESVLGIACDMYRSEEK 156
TW++ I GY G LG+ M S K
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 157 FNEHTCSVILEACSLLEDRIFGEQIHAFAI-------KSGFENNVFVGTSLISMYFHSGC 209
NE T +L C+ + + G++IH +AI K+G + V LI MY
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 210 FREAENVFRGLAYK--DVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE--PNDYTFTN 265
A +F L+ K DV MI Y++ G++ A + + D + PN +T +
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 266 VISVCYENLGVEEGKQLHGLAVKFGV-VREISVGNAIVTMYGKHGMSEEAERMFDAISER 324
+ C + GKQ+H A++ + V N ++ MY K G +A +FD + +
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQ-L 383
N ++WT+L++GY G+G +A+ F E +G D L V+ CS ++ G++
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
+ G LVD+ + G L +A L++
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIE 639
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 4/307 (1%)
Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI--SERNLISWTALI 333
+ + K +H + FG++ +++ + +++ Y G A + S+ + W +LI
Sbjct: 41 ISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 334 SGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYL 393
Y +G K + F L D+ V C S++ G H ++ G++
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 394 SDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
S+V +G ALV +Y++ L AR + D S +N+I+ + K+ + + +
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY-AKLGKPKVALEMFSR 218
Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
G PD +T +L AS G+ LH +++ + ++ VGN L+ MYAKCG
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 278
Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
+D A +F +S +D+VSWNAM++ Y+ G + A+ LFE+M+ E D ++ +
Sbjct: 279 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338
Query: 574 ACIYSGL 580
GL
Sbjct: 339 GYAQRGL 345
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 16/278 (5%)
Query: 72 GDLKLGQAVHAF-------LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV--R 122
G L G+ +H + L K+G ++ N LI++YAK ++D A+ +FD + R
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 123 SAITWTSLIKGYLDDGDYESVLGIACDMYRS--EEKFNEHTCSVILEACSLLEDRIFGEQ 180
+TWT +I GY GD L + +M+ + + N T S L AC+ L G+Q
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 181 IHAFAIKSGFENNV--FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
IHA+A+++ +N V FV LI MY G +A VF + K+ ++ Y
Sbjct: 499 IHAYALRNQ-QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557
Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ-LHGLAVKFGVVREISV 297
G E A +F + F+ + T V+ C + +++G + + + FGV
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH 617
Query: 298 GNAIVTMYGKHGMSEEAERMFDAIS-ERNLISWTALIS 334
+V + G+ G A R+ + + E + W A +S
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 220/686 (32%), Positives = 358/686 (52%), Gaps = 16/686 (2%)
Query: 68 SIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITW 127
S+ D++L + + + KSG D F + L++ +AK L A+K+F+ M R+A+T
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEA---CSLLEDRIF--GEQIH 182
L+ G + E + DM S + + ++L + SL E+ G ++H
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVH 336
Query: 183 AFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
I +G + V +G L++MY G +A VF + KD N MI ++ G
Sbjct: 337 GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396
Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
A + + D P +T + +S C + G+Q+HG ++K G+ +SV NA+
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456
Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG-GKAINGFLEFLDLGICCD 360
+T+Y + G E ++F ++ E + +SW ++I RS +A+ FL G +
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLN 516
Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
++V+ S S ELG Q+HG A+K+ + AL+ Y K G++ +
Sbjct: 517 RITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576
Query: 421 GFSCKY-TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
+ + +N+++SG++ + +V F Q G D ++ +LS AS A
Sbjct: 577 RMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ--TGQRLDSFMYATVLSAFASVAT 634
Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
L RG +HA S++ +DV+VG+AL+ MY+KCG +D A + F + R+ SWN+M+S
Sbjct: 635 LERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISG 694
Query: 540 YALHGLGKGALLLFEEMKREG-FAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLR 598
YA HG G+ AL LFE MK +G PD ++ +GVL AC ++GL E G F + YGL
Sbjct: 695 YARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLA 754
Query: 599 PILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL---A 655
P +EHF+CM D+LGRAG L + + I P + L+WRT++ AN + + L A
Sbjct: 755 PRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC-CRANGRKAELGKKA 813
Query: 656 SKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHH 715
++ L LEP++A +++L+ NMYA G ++ K R M D + KEAG SW+ + +H
Sbjct: 814 AEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHM 873
Query: 716 FVASGKDHPESEEIYSKLDLLNDEMK 741
FVA K HP+++ IY KL LN +M+
Sbjct: 874 FVAGDKSHPDADVIYKKLKELNRKMR 899
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 176/642 (27%), Positives = 301/642 (46%), Gaps = 22/642 (3%)
Query: 69 IGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAK-FNRLDVAQKLFDGMLVRSAITW 127
IGS + G+ +H + K D +N LI++Y K + A F + V+++++W
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 128 TSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC-SVILEACSLLE-DRIFGEQIHAFA 185
S+I Y GD S I M + E+T S++ ACSL E D EQI
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 186 IKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAF 245
KSG ++FVG+ L+S + SG A VF + ++ +N +++ + E A
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 246 HVFVHLLSS-DFEPNDYTFTNVISVCY---ENLGVEEGKQLHGLAVKFGVVR-EISVGNA 300
+F+ + S D P Y Y E +G+++G+++HG + G+V + +GN
Sbjct: 295 KLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
+V MY K G +A R+F +++++ +SW ++I+G ++G +A+ + I
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
S L + + C+ +LG Q+HG ++K G +V + AL+ +YA+ G L R +
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 421 GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACL 480
+N+I+ E V+ + QR AG + + +TFS +LS +S +
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR-AGQKLNRITFSSVLSAVSSLSFG 533
Query: 481 VRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD-RDIVSWNAMLSA 539
G+ +H ++K A + NALI Y KCG +DG +IF +++ RD V+WN+M+S
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
Y + L AL L M + G D VL A E G+ E+ +R
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM----EVHAC-SVRA 648
Query: 600 ILEH----FACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSI 653
LE + +VD+ + GRL A+ N+ P S W +++S +
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS-YSWNSMISGYARHGQGEEALKL 707
Query: 654 LASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
+ +L P D +F+ V + + G+L+E K +M+D
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 749
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 226/480 (47%), Gaps = 30/480 (6%)
Query: 81 HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
H+ L K+ D + NNLIN Y + A+K+FD M +R+ ++W ++ GY +G++
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR--IFGEQIHAFAIKSGFENNVFVGT 198
+ L DM + N++ +L AC + +FG QIH K + + V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 199 SLISMYFHS-GCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFE 257
LISMY+ G A F + K+ N +I Y++AG+ AF +F +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 258 PNDYTFTNVISVC--YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
P +YTF ++++ V +Q+ K G++ ++ VG+ +V+ + K G A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
++F+ + RN ++ L+ G VR G +A F+D+ D S + VI S
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATK---LFMDMNSMIDVSPESYVILLSSFPE 320
Query: 376 -------NLELGLQLHGFAIKHGYLS-DVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
L+ G ++HG I G + V +G LV++YAK G + AR + + K +
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 428 AEFNAILSG------FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
+N++++G F+E + + R + P T LS AS
Sbjct: 381 VSWNSMITGLDQNGCFIEAVER--------YKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 482 RGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYA 541
G+ +H S+K G +V V NAL+T+YA+ G ++ +IF + + D VSWN+++ A A
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 471 LSLSASQACL-VRG--RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISD 527
+ LS Q+C+ RG R H+ K DV + N LI Y + G A ++F +
Sbjct: 5 VPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
R+ VSW ++S Y+ +G K AL+ +M +EG + + + VL+AC
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRAC 112
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 199/667 (29%), Positives = 355/667 (53%), Gaps = 7/667 (1%)
Query: 80 VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
H + +K GS +D + +N +++ Y KF L A LFD M R +++W ++I GY G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 140 YESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS 199
E + M RS + ++ S +L+ + ++ GEQ+H IK G+E NV+VG+S
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF-VHLLSSDFEP 258
L+ MY +A F+ ++ + N +I + + + + AF + + + +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 259 NDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMF 318
+ TF ++++ + + KQ+H +K G+ EI++ NA+++ Y G +A+R+F
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 319 DAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
D + ++LISW ++I+G+ + A F++ + D ++ CS +
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAK--GGDLKSARMLLDGFSCKYTAEFNAILS 435
G LHG IK G AL+ +Y + G ++ A L + K +N+I++
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGY 495
GF +K ED + FS R + ++ D FS LL + A L G+ +HA + K+G+
Sbjct: 382 GFAQK--GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGF 439
Query: 496 AADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIVSWNAMLSAYALHGLGKGALLLFE 554
++ V ++LI MY+KCG I+ A + F+ IS + V+WNAM+ YA HGLG+ +L LF
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFS 499
Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
+M + D ++ +L AC ++GL + G+ L N +E +Y ++P +EH+A VDLLGRA
Sbjct: 500 QMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRA 559
Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
G +++A LI S P + P++ +T + V + + + + LL++EP+D +++ +S
Sbjct: 560 GLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLS 619
Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
+MY+ +E A V+ M + + K G SWIEI +++ F A + +P ++IY +
Sbjct: 620 HMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIK 679
Query: 735 LLNDEMK 741
L EM+
Sbjct: 680 DLTQEMQ 686
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 225/428 (52%), Gaps = 31/428 (7%)
Query: 76 LGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYL 135
LG+ VH ++K G + + + ++L+++YAK R++ A + F + ++++W +LI G++
Sbjct: 119 LGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFV 178
Query: 136 DDGDYESVLGIACDMYRSEEKFNEHTCSVILEA------CSLLEDRIFG---EQIHAFAI 186
D ++ + M E +V ++A +LL+D +F +Q+HA +
Sbjct: 179 QVRDIKTAFWLLGLM--------EMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVL 230
Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGL-AYKDVRCVNFMILEYNKAGESEMAF 245
K G ++ + + ++IS Y G +A+ VF GL KD+ N MI ++K E AF
Sbjct: 231 KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAF 290
Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
+F+ + E + YT+T ++S C GK LHG+ +K G+ + S NA+++MY
Sbjct: 291 ELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY 350
Query: 306 GKH--GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
+ G E+A +F+++ ++LISW ++I+G+ + G A+ F I D
Sbjct: 351 IQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYA 410
Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
+ ++ CS + L+LG Q+H A K G++S+ + ++L+ +Y+K G ++SAR S
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 424 CKY-TAEFNAILSGFME----KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
K+ T +NA++ G+ + +++ D LFSQ ++ D VTF+ +L+ +
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLD------LFSQMCNQNVKLDHVTFTAILTACSHTG 524
Query: 479 CLVRGRSL 486
+ G L
Sbjct: 525 LIQEGLEL 532
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 74 LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVR-SAITWTSLIK 132
L+LGQ +HA KSG ++ F ++LI +Y+K ++ A+K F + + S + W ++I
Sbjct: 424 LQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMIL 483
Query: 133 GYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFGEQIHAFAIK 187
GY G + L + M K + T + IL ACS L+++ + + I+
Sbjct: 484 GYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQ 543
Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA-GESEMAFH 246
E+ + + + +G +A+ + + V L +A GE EMA
Sbjct: 544 PRMEHY----AAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQ 599
Query: 247 VFVHLLSSDFEPNDYTFTNV-ISVCYENLGVEEGK 280
V HLL + EP D+ FT V +S Y +L E K
Sbjct: 600 VANHLL--EIEPEDH-FTYVSLSHMYSDLKKWEEK 631
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/681 (28%), Positives = 354/681 (51%), Gaps = 12/681 (1%)
Query: 77 GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
G V++ L S S N + ++ +F L A +F M R+ +W L+ GY
Sbjct: 113 GSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK 172
Query: 137 DGDYESVLGIACDM-YRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVF 195
G ++ + + M + K + +T +L C + D G+++H ++ G+E ++
Sbjct: 173 QGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDID 232
Query: 196 VGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSD 255
V +LI+MY G + A +F + +D+ N MI Y + G +F +
Sbjct: 233 VVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS 292
Query: 256 FEPNDYTFTNVISVCYENLGVEE-GKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA 314
+P+ T T+VIS C E LG G+ +H + G +ISV N++ MY G EA
Sbjct: 293 VDPDLMTLTSVISAC-ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 315 ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVC 374
E++F + ++++SWT +ISGY + KAI+ + + D +A V+ C+
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411
Query: 375 SNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAIL 434
+L+ G++LH AIK +S V + L+++Y+K + A + K + +I+
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471
Query: 435 SGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
+G ++ + + ++ Q ++ ++P+ +T + L+ A L+ G+ +HA+ ++TG
Sbjct: 472 AGL--RLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFE 554
D + NAL+ MY +CG ++ A+ F +D+ SWN +L+ Y+ G G + LF+
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 555 EMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRA 614
M + PD+I+ + +L C S + G+ F+++E YG+ P L+H+AC+VDLLGRA
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRA 646
Query: 615 GRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVS 674
G L EA I P + P +W L++ ++ L+++ + +L+ K G +IL+
Sbjct: 647 GELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLC 706
Query: 675 NMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLD 734
N+YA G E AKVR M + L+ +AGCSW+E+ K+H F++ K HP+++EI + L+
Sbjct: 707 NLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Query: 735 LLNDEMK----LKVKDSSAFE 751
++M K+ +SS+ +
Sbjct: 767 GFYEKMSEVGLTKISESSSMD 787
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 233/485 (48%), Gaps = 9/485 (1%)
Query: 62 PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
P +++ G DL G+ VH +++ G + D N LI +Y K + A+ LFD M
Sbjct: 200 PCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPR 259
Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQI 181
R I+W ++I GY ++G L + M + T + ++ AC LL DR G I
Sbjct: 260 RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI 319
Query: 182 HAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGES 241
HA+ I +GF ++ V SL MY ++G +REAE +F + KD+ MI Y
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLP 379
Query: 242 EMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAI 301
+ A + + +P++ T V+S C ++ G +LH LA+K ++ + V N +
Sbjct: 380 DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 302 VTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDS 361
+ MY K ++A +F I +N+ISWT++I+G + +A+ FL + + + ++
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI-FLRQMKMTLQPNA 498
Query: 362 SCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDG 421
L + C+ L G ++H ++ G D L AL+D+Y + G + +A +
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS 558
Query: 422 FSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLV 481
K +N +L+G+ E+ V+ LF + + + PD +TF LL S++ +V
Sbjct: 559 QK-KDVTSWNILLTGYSER--GQGSMVVELFDRMVKSRVRPDEITFISLLC-GCSKSQMV 614
Query: 482 RGRSLHAYSIKTGYAADVIVGN--ALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
R + L +S Y + + ++ + + G + A + + + D W A+L+
Sbjct: 615 R-QGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 539 AYALH 543
A +H
Sbjct: 674 ACRIH 678
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 168/325 (51%), Gaps = 3/325 (0%)
Query: 262 TFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAI 321
F ++ +C EEG +++ +A+ + +GNA + M+ + G +A +F +
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 322 SERNLISWTALISGYVRSGHGGKAINGFLEFLDL-GICCDSSCLATVIDGCSVCSNLELG 380
SERNL SW L+ GY + G+ +A+ + L + G+ D V+ C +L G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 381 LQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEK 440
++H +++GY D+ + AL+ +Y K GD+KSAR+L D + +NA++SG+ E
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 441 IADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVI 500
E + LF R ++PD +T + ++S GR +HAY I TG+A D+
Sbjct: 276 GMCHEG--LELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 501 VGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREG 560
V N+L MY GS A ++F + +DIVSW M+S Y + L A+ + M ++
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 561 FAPDDISILGVLQACIYSGLSEGGI 585
PD+I++ VL AC G + G+
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGV 418
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 18/229 (7%)
Query: 445 EEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNA 504
EE + +L S Q L + D F L+ L + G +++ ++ + + V +GNA
Sbjct: 76 EEAMKLLNSMQELR-VAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 505 LITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKR-EGFAP 563
+ M+ + G++ A+ +F +S+R++ SWN ++ YA G A+ L+ M G P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 564 DDISILGVLQACIYSGLSEGGICLFNEIEQI------YGLRPILEHFACMVDLLGRAGRL 617
D + VL+ C GGI +++ YG ++ ++ + + G +
Sbjct: 195 DVYTFPCVLRTC-------GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 618 SEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLLDLEP 664
A L + P + W ++S M + + + R L ++P
Sbjct: 248 KSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/640 (29%), Positives = 341/640 (53%), Gaps = 14/640 (2%)
Query: 103 YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTC 162
+A ++ A +LFD M A W +IKG+ G Y + M + K + T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
++++ + + G++IHA IK GF ++V+V SLIS+Y GC +AE VF +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
+D+ N MI Y G+ + +F +L F+P+ ++ + + C + GK++
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 283 HGLAVKFGV-VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
H AV+ + ++ V +I+ MY K+G AER+F+ + +RN+++W +I Y R+G
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG- 312
Query: 342 GGKAINGFLEFLDL----GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVR 397
+ + FL F + G+ D + T I+ + LE G +HG+A++ G+L +
Sbjct: 313 --RVTDAFLCFQKMSEQNGLQPD---VITSINLLPASAILE-GRTIHGYAMRRGFLPHMV 366
Query: 398 LGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRL 457
L TAL+D+Y + G LKSA ++ D + K +N+I++ +++ + LF +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQN--GKNYSALELFQELWD 424
Query: 458 AGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDG 517
+ + PD T + +L A L GR +HAY +K+ Y ++ I+ N+L+ MYA CG ++
Sbjct: 425 SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLED 484
Query: 518 AFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIY 577
A + F I +D+VSWN+++ AYA+HG G+ ++ LF EM P+ + +L AC
Sbjct: 485 ARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSI 544
Query: 578 SGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWR 637
SG+ + G F +++ YG+ P +EH+ CM+DL+GR G S A + PF + +W
Sbjct: 545 SGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWG 604
Query: 638 TLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLR 697
+L++ S+ + + A++++ +E + G ++L+ NMYA G ++ +++ M
Sbjct: 605 SLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKG 664
Query: 698 LSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
+S+ + S +E K H F + H + +IY LD+++
Sbjct: 665 ISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS 704
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 222/425 (52%), Gaps = 13/425 (3%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
+P ++K G L+ G+ +HA ++K G +D + N+LI+LY K A+K+F+ M
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
R ++W S+I GYL GD S L + +M + K + + L ACS + G++
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 181 IHAFAIKSGFEN-NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
IH A++S E +V V TS++ MY G AE +F G+ +++ N MI Y + G
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 240 ESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
AF F + + +P+ T N++ + EG+ +HG A++ G + + +
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLPHMVLE 368
Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
A++ MYG+ G + AE +FD ++E+N+ISW ++I+ YV++G A+ F E D +
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARML 418
DS+ +A+++ + +L G ++H + +K Y S+ + +LV +YA GDL+ AR
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 419 LDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQA 478
+ K +N+I+ + + + LFS+ + + P+ TF+ LL+ A
Sbjct: 489 FNHILLKDVVSWNSIIMAY--AVHGFGRISVWLFSEMIASRVNPNKSTFASLLA-----A 541
Query: 479 CLVRG 483
C + G
Sbjct: 542 CSISG 546
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/630 (29%), Positives = 322/630 (51%), Gaps = 68/630 (10%)
Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
Q HA +KSG +N+ ++ LI+ Y + CF +A+ V + + + + +I KA
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGN 299
+ VF + S P+ + N+ VC E + GKQ+H ++ G+ + V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 300 AIVTMYGKHGMSEEAERMFDAISER----------------------------------- 324
++ MY + G +A ++FD +S++
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 325 NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLH 384
N++SW ++SG+ RSG+ +A+ F + LG C D +++V+ L +G +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 385 GFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG-------- 436
G+ IK G L D + +A++D+Y K G + L + F NA ++G
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 437 --------FMEKI---------------ADDEEDV--MVLFSQQRLAGMEPDPVTFSRLL 471
F E+ A + +D+ + LF + ++AG++P+ VT +L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 472 SLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIV 531
+ A L GRS H ++++ +V VG+ALI MYAKCG I+ + +F + +++V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 532 SWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEI 591
WN++++ +++HG K + +FE + R PD IS +L AC GL++ G F +
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 592 EQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKF 651
+ YG++P LEH++CMV+LLGRAG+L EA +LI PF +W L++ +L N
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 652 SILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDS 711
+ +A+++L LEP++ G+++L+SN+YA +GM E +R M L L K GCSWI++ +
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 712 KLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
+++ +A K HP+ ++I K+D ++ EM+
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMR 665
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/541 (22%), Positives = 237/541 (43%), Gaps = 75/541 (13%)
Query: 75 KLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
K QA HA +LKSG+QND + + LI Y+ +N + A + + + +++SLI
Sbjct: 33 KTTQA-HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 135 LDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNV 194
+ +G+ M+ + H + + C+ L G+QIH + SG + +
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 195 FVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSS 254
FV S+ MY G +A VF ++ KDV + ++ Y + G E + + SS
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 255 DFEPNDYTFTNVIS----------------------VCYENLGVEE-------------G 279
E N ++ ++S C + + V G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 280 KQLHGLAVKFGVVREISVGNAIVTMYGK-------------------------------H 308
+ +HG +K G++++ V +A++ MYGK +
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 309 GMSEEAERMFDAISER----NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
G+ ++A MF+ E+ N++SWT++I+G ++G +A+ F E G+ + +
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
+++ C + L G HGFA++ L +V +G+AL+D+YAK G + ++++ +
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG- 483
K +N++++GF + ++VM +F ++PD ++F+ LLS G
Sbjct: 452 KNLVCWNSLMNGF--SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
+ S + G + + ++ + + G + A+ + K + + D W A+L++ L
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRL 569
Query: 543 H 543
Sbjct: 570 Q 570
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 197/499 (39%), Gaps = 95/499 (19%)
Query: 62 PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLV 121
P L K+ K+G+ +H SG D F ++ ++Y + R+ A+K+FD M
Sbjct: 120 PNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD 179
Query: 122 RSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFN----------------------- 158
+ +T ++L+ Y G E V+ I +M S + N
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVM 239
Query: 159 ------------EHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFH 206
+ T S +L + E G IH + IK G + V +++I MY
Sbjct: 240 FQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK 299
Query: 207 SGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNV 266
SG ++F + N I ++ G + A +F E N ++T++
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 267 ISVCYEN---------------LGVE--------------------EGKQLHGLAVKFGV 291
I+ C +N GV+ G+ HG AV+ +
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 292 VREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLE 351
+ + VG+A++ MY K G ++ +F+ + +NL+ W +L++G+ G + ++ F
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 352 FLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAI------KHGYLSDVRLGTALVDI 405
+ + D +++ C ++GL G+ ++G + + +V++
Sbjct: 480 LMRTRLKPDFISFTSLLSACG-----QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 406 YAKGGDLKSA-----RMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGM 460
+ G L+ A M + SC + A N S ++ D E + ++L +
Sbjct: 535 LGRAGKLQEAYDLIKEMPFEPDSCVWGALLN---SCRLQNNVDLAE-----IAAEKLFHL 586
Query: 461 EPD-PVTFSRLLSLSASQA 478
EP+ P T+ L ++ A++
Sbjct: 587 EPENPGTYVLLSNIYAAKG 605
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 320/617 (51%), Gaps = 43/617 (6%)
Query: 155 EKFNEHTCSVILEACSLLED-RIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFR-- 211
+ H +L C L+ RI IHA IK G N + + LI S F
Sbjct: 29 DSIRNHPSLSLLHNCKTLQSLRI----IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGL 84
Query: 212 -EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVC 270
A +VF+ + ++ N M + + + A ++V ++S PN YTF V+ C
Sbjct: 85 PYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 144
Query: 271 YENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEA---------------- 314
++ +EG+Q+HG +K G ++ V ++++MY ++G E+A
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 315 ---------------ERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
+++FD I ++++SW A+ISGY +G+ +A+ F + + +
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
D S + TV+ C+ ++ELG Q+H + HG+ S++++ AL+D+Y+K G+L++A L
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
+ K +N ++ G+ + ++ ++LF + +G P+ VT +L A
Sbjct: 325 ERLPYKDVISWNTLIGGYTH--MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 480 LVRGRSLHAYSIK--TGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
+ GR +H Y K G + +LI MYAKCG I+ A Q+F I + + SWNAM+
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
+A+HG + LF M++ G PDDI+ +G+L AC +SG+ + G +F + Q Y +
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502
Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASK 657
P LEH+ CM+DLLG +G EA +IN ++W +L+ K+ N + ++
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562
Query: 658 RLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFV 717
L+ +EP++ GS++L+SN+YA G +E AK R +ND + K GCS IEIDS +H F+
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 718 ASGKDHPESEEIYSKLD 734
K HP + EIY L+
Sbjct: 623 IGDKFHPRNREIYGMLE 639
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 176/390 (45%), Gaps = 42/390 (10%)
Query: 30 NTFSPNPKSQVA-YLCSISSVSCSERTLLFNDW--PQLVKISIGSGDLKLGQAVHAFLLK 86
+ S +P S + Y+C IS LL N + P ++K S K GQ +H +LK
Sbjct: 109 HALSSDPVSALKLYVCMIS------LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 87 SGSQNDTFEANNLINLYAKFNRL-------------DV------------------AQKL 115
G D + +LI++Y + RL DV AQKL
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 116 FDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDR 175
FD + V+ ++W ++I GY + G+Y+ L + DM ++ + +E T ++ AC+
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 176 IFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEY 235
G Q+H + GF +N+ + +LI +Y G A +F L YKDV N +I Y
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 236 NKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKF--GVVR 293
+ A +F +L S PND T +++ C ++ G+ +H K GV
Sbjct: 343 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 294 EISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFL 353
S+ +++ MY K G E A ++F++I ++L SW A+I G+ G + + F
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 354 DLGICCDSSCLATVIDGCSVCSNLELGLQL 383
+GI D ++ CS L+LG +
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 280/496 (56%), Gaps = 8/496 (1%)
Query: 252 LSSDFEPNDYTFTN-VISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
L + P D F N ++ C + +G+ +H ++ +I +GN ++ MY K G
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
EEA ++F+ + +R+ ++WT LISGY + A+ F + L G + L++VI
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
+ G QLHGF +K G+ S+V +G+AL+D+Y + G + A+++ D + +
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
NA+++G + E + LF G P +++ L +S L +G+ +HAY
Sbjct: 231 NALIAGHARR--SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
IK+G GN L+ MYAK GSI A +IF ++ RD+VSWN++L+AYA HG GK A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
FEEM+R G P++IS L VL AC +SGL + G + E+ + G+ P H+ +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDL 407
Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
LGRAG L+ A+ I P + +W+ L++ ++ N++ A++ + +L+P D G
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
+++ N+YA G ++AA+VR M + + KE CSW+EI++ +H FVA+ + HP+ EEI
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527
Query: 731 SKLDLLNDEMKLKVKD 746
K +E+ K+K+
Sbjct: 528 RKW----EEVLAKIKE 539
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 192/387 (49%), Gaps = 3/387 (0%)
Query: 77 GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
G+ VHA +L+S ++D N L+N+YAK L+ A+K+F+ M R +TWT+LI GY
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
L M R NE T S +++A + G Q+H F +K GF++NV V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
G++L+ +Y G +A+ VF L ++ N +I + + +E A +F +L F
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
P+ +++ ++ C +E+GK +H +K G GN ++ MY K G +A +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
+FD +++R+++SW +L++ Y + G G +A+ F E +GI + +V+ CS
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
L+ G + K G + + +VD+ + GDL A ++ + TA AI
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTA---AIWKA 435
Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPD 463
+ + + ++ + + ++PD
Sbjct: 436 LLNACRMHKNTELGAYAAEHVFELDPD 462
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 183/382 (47%), Gaps = 3/382 (0%)
Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
+ +L+ C++ + I G +HA ++S F +++ +G +L++MY G EA VF +
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
+D +I Y++ A F +L + PN++T ++VI G QL
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
HG VK G + VG+A++ +Y ++G+ ++A+ +FDA+ RN +SW ALI+G+ R
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 343 GKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTAL 402
KA+ F L G A++ CS LE G +H + IK G G L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 403 VDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEP 462
+D+YAK G + AR + D + + +N++L+ + + E + F + R G+ P
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE--AVWWFEEMRRVGIRP 361
Query: 463 DPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIF 522
+ ++F +L+ + L G + K G + ++ + + G ++ A +
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 523 KGISDRDIVS-WNAMLSAYALH 543
+ + + W A+L+A +H
Sbjct: 422 EEMPIEPTAAIWKALLNACRMH 443
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 71 SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
+G L+ G+ VHA+++KSG + F N L+++YAK + A+K+FD + R ++W SL
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334
Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
+ Y G + + +M R + NE + +L ACS
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/619 (30%), Positives = 330/619 (53%), Gaps = 16/619 (2%)
Query: 103 YAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKF--NEH 160
YA + A+KLF+ M S +++ +I+ Y+ +G Y + + M K + +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 161 TCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGL 220
T + +A L+ G +H ++S F + +V +L++MY + G A +VF +
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
+DV N MI Y + G A +F +++ + + T +++ VC +E G+
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSG 340
+H L + + +I V NA+V MY K G +EA +FD + R++I+WT +I+GY G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298
Query: 341 HGGKAINGFLEFLDL----GICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDV 396
+ LE L G+ ++ +A+++ C + G LHG+A++ SD+
Sbjct: 299 D----VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDI 354
Query: 397 RLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQR 456
+ T+L+ +YAK + + G S +T ++AI++G ++ + D + LF + R
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQN--ELVSDALGLFKRMR 412
Query: 457 LAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSID 516
+EP+ T + LL A+ A L + ++H Y KTG+ + + L+ +Y+KCG+++
Sbjct: 413 REDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLE 472
Query: 517 GAFQIFKGISDR----DIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVL 572
A +IF GI ++ D+V W A++S Y +HG G AL +F EM R G P++I+ L
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSAL 532
Query: 573 QACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSES 632
AC +SGL E G+ LF + + Y H+ C+VDLLGRAGRL EA NLI + PF +
Sbjct: 533 NACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPT 592
Query: 633 PLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTT 692
+W L++ N + +A+ +L +LEP++ G+++L++N+YA G + KVR+
Sbjct: 593 STVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSM 652
Query: 693 MNDLRLSKEAGCSWIEIDS 711
M ++ L K+ G S IEI S
Sbjct: 653 MENVGLRKKPGHSTIEIRS 671
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 234/491 (47%), Gaps = 12/491 (2%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
+P + K + +KLG VH +L+S D + N L+ +Y F ++++A+ +FD M
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
R I+W ++I GY +G L + M + T +L C L+D G
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
+H + + + V +L++MY G EA VF + +DV MI Y + G+
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 299
Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
E A + + PN T +++SVC + L V +GK LHG AV+ V +I + +
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS 359
Query: 301 IVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCD 360
+++MY K + R+F S+ + W+A+I+G V++ A+ F + +
Sbjct: 360 LISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPN 419
Query: 361 SSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLD 420
+ L +++ + ++L + +H + K G++S + T LV +Y+K G L+SA + +
Sbjct: 420 IATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 421 GFSCKYTAE----FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
G K+ ++ + A++SG+ + D + + +F + +G+ P+ +TF+ L+ +
Sbjct: 480 GIQEKHKSKDVVLWGALISGY--GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537
Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGN---ALITMYAKCGSIDGAFQIFKGIS-DRDIVS 532
+ G +L + ++ + + N ++ + + G +D A+ + I +
Sbjct: 538 SGLVEEGLTLFRFMLE--HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTV 595
Query: 533 WNAMLSAYALH 543
W A+L+A H
Sbjct: 596 WGALLAACVTH 606
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/664 (29%), Positives = 333/664 (50%), Gaps = 7/664 (1%)
Query: 80 VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
HA ++ G +ND L + + A+ +F + + L++G+ +
Sbjct: 39 THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 140 YESVLGIACDMYRSEE-KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGT 198
S L + + +S + K N T + + A S D G IH A+ G ++ + +G+
Sbjct: 99 PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS 158
Query: 199 SLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEP 258
+++ MYF +A VF + KD N MI Y K + VF L++
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 259 NDYT-FTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERM 317
D T +++ E + G Q+H LA K G V +++Y K G + +
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL 278
Query: 318 FDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL 377
F + +++++ A+I GY +G +++ F E + G SS L +++ V +L
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHL 335
Query: 378 ELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGF 437
L +HG+ +K +LS + TAL +Y+K +++SAR L D K +NA++SG+
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 438 MEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA 497
+ ED + LF + + + P+PVT + +LS A L G+ +H T + +
Sbjct: 396 TQN--GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
+ V ALI MYAKCGSI A ++F ++ ++ V+WN M+S Y LHG G+ AL +F EM
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
G P ++ L VL AC ++GL + G +FN + YG P ++H+ACMVD+LGRAG L
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
A+ I + +W TL+ ++ ++ + S++L +L+P + G +L+SN++
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
+ +AA VR T +L+K G + IEI H F + + HP+ +EIY KL+ L
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLE 693
Query: 738 DEMK 741
+M+
Sbjct: 694 GKMR 697
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 229/487 (47%), Gaps = 20/487 (4%)
Query: 67 ISIGSG--DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
IS SG D + G+ +H + G ++ +N++ +Y KF R++ A+K+FD M +
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMY-RSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
I W ++I GY + Y + + D+ S + + T IL A + L++ G QIH+
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
A K+G ++ +V T IS+Y G + +FR D+ N MI Y GE+E+
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
+ +F L+ S T +++ V + + +HG +K + SV A+ T
Sbjct: 306 SLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTT 362
Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
+Y K E A ++FD E++L SW A+ISGY ++G AI+ F E +
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
+ ++ C+ L LG +H + S + + TAL+ +YAK G + AR L D +
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVR- 482
K +N ++SG+ + ++ + +F + +G+ P PVTF +L + S A LV+
Sbjct: 483 KKNEVTWNTMISGY--GLHGQGQEALNIFYEMLNSGITPTPVTFLCVL-YACSHAGLVKE 539
Query: 483 -----GRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAM 536
+H Y G+ V ++ + + G + A Q + +S S W +
Sbjct: 540 GDEIFNSMIHRY----GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETL 595
Query: 537 LSAYALH 543
L A +H
Sbjct: 596 LGACRIH 602
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 222/464 (47%), Gaps = 9/464 (1%)
Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
Q HA I GF N++ + T L G A ++F + DV N ++ ++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 240 ESEMAFHVFVHLL-SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
+ VF HL S+D +PN T+ IS G+ +HG AV G E+ +G
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
+ IV MY K E+A ++FD + E++ I W +ISGY ++ ++I F + ++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 359 -CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
D++ L ++ + L LG+Q+H A K G S + T + +Y+K G +K
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
L F +NA++ G+ + E + LF + L+G + S L+SL
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSN--GETELSLSLFKELMLSGAR---LRSSTLVSLVPVS 332
Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
L+ ++H Y +K+ + + V AL T+Y+K I+ A ++F ++ + SWNAM+
Sbjct: 333 GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
S Y +GL + A+ LF EM++ F+P+ ++I +L AC G G + + +
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS 641
I A ++ + + G ++EA L + ++ + W T++S
Sbjct: 453 SSIYVSTA-LIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMIS 494
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 1/260 (0%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
LV + SG L L A+H + LKS + + L +Y+K N ++ A+KLFD +S
Sbjct: 325 LVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKS 384
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHA 183
+W ++I GY +G E + + +M +SE N T + IL AC+ L G+ +H
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD 444
Query: 184 FAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
+ FE++++V T+LI MY G EA +F + K+ N MI Y G+ +
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQE 504
Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL-HGLAVKFGVVREISVGNAIV 302
A ++F +L+S P TF V+ C V+EG ++ + + ++G + +V
Sbjct: 505 ALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMV 564
Query: 303 TMYGKHGMSEEAERMFDAIS 322
+ G+ G + A + +A+S
Sbjct: 565 DILGRAGHLQRALQFIEAMS 584
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 317/575 (55%), Gaps = 10/575 (1%)
Query: 165 ILEACSL--LEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAY 222
IL C+ L D+ G Q+H + +KSG N+ LI MY A VF +
Sbjct: 12 ILRVCTRKGLSDQ--GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 223 KDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQL 282
++V + ++ + G+ + + +F + PN++TF+ + C +E+G Q+
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 283 HGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHG 342
HG +K G + VGN++V MY K G EAE++F I +R+LISW A+I+G+V +G+G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 343 GKAIN--GFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGY--LSDVRL 398
KA++ G ++ ++ D L +++ CS + G Q+HGF ++ G+ S +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 399 GTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLA 458
+LVD+Y K G L SAR D K +++++ G+ ++ + + M LF + +
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQE--GEFVEAMGLFKRLQEL 307
Query: 459 GMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGA 518
+ D S ++ + A A L +G+ + A ++K + V N+++ MY KCG +D A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 519 FQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYS 578
+ F + +D++SW +++ Y HGLGK ++ +F EM R PD++ L VL AC +S
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 579 GLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRT 638
G+ + G LF+++ + +G++P +EH+AC+VDLLGRAGRL EA +LI++ P + +W+T
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 639 LVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRL 698
L+S+ ++ + + K LL ++ K+ +++++SN+Y G +E R N L
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 699 SKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKL 733
KEAG SW+EI+ ++H F + HP + I L
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETL 582
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 237/487 (48%), Gaps = 13/487 (2%)
Query: 77 GQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLD 136
G VH +LLKSGS + +N LI++Y K +A K+FD M R+ ++W++L+ G++
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 137 DGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
+GD + L + +M R NE T S L+AC LL G QIH F +K GFE V V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
G SL+ MY G EAE VFR + + + N MI + AG A F + ++
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 257 E--PNDYTFTNVISVCYENLGVEEGKQLHGLAVK--FGVVREISVGNAIVTMYGKHGMSE 312
+ P+++T T+++ C + GKQ+HG V+ F ++ ++V +Y K G
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 313 EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCS 372
A + FD I E+ +ISW++LI GY + G +A+ F +L DS L+++I +
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324
Query: 373 VCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNA 432
+ L G Q+ A+K + + ++VD+Y K G + A K +
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 433 ILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIK 492
+++G+ K ++ V + + R +EPD V + +LS + + G L + ++
Sbjct: 385 VITGY-GKHGLGKKSVRIFYEMLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 493 T-GYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALHG---LGK 547
T G V ++ + + G + A + + + V W +LS +HG LGK
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502
Query: 548 --GALLL 552
G +LL
Sbjct: 503 EVGKILL 509
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 166/323 (51%), Gaps = 10/323 (3%)
Query: 258 PND-YTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
PN +++ VC ++G Q+H +K G + N ++ MY K A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
+FD++ ERN++SW+AL+SG+V +G +++ F E GI + +T + C + +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
LE GLQ+HGF +K G+ V +G +LVD+Y+K G + A + + +NA+++G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 437 FMEKIADDEEDVMVLFSQQRLAGME--PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTG 494
F+ A + F + A ++ PD T + LL +S + G+ +H + +++G
Sbjct: 183 FVH--AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 495 Y--AADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLL 552
+ + + +L+ +Y KCG + A + F I ++ ++SW++++ YA G A+ L
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 553 FEEMKREGFAPDDI---SILGVL 572
F+ ++ D SI+GV
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVF 323
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 140/288 (48%), Gaps = 22/288 (7%)
Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
L +++ C+ + G Q+H + +K G ++ L+D+Y K + A + D
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
+ ++A++SG + + D + + LFS+ G+ P+ TFS L L +G
Sbjct: 69 ERNVVSWSALMSGHV--LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALH 543
+H + +K G+ V VGN+L+ MY+KCG I+ A ++F+ I DR ++SWNAM++ +
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 544 GLGKGALLLFEEMKREGFA--PDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPIL 601
G G AL F M+ PD+ ++ +L+AC +G+ G +QI+G +
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG-------KQIHGF-LVR 238
Query: 602 EHFAC---------MVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLV 640
F C +VDL + G L A + ++ + W +L+
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 326/616 (52%), Gaps = 18/616 (2%)
Query: 96 ANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEE 155
++ LI++Y L A+ +F+ + + +W +++ Y +G +E VL + M +
Sbjct: 237 SSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDV 296
Query: 156 KFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAEN 215
+ N+ + L+A + + D + G IH +A++ G +V V TSL+SMY G AE
Sbjct: 297 RMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQ 356
Query: 216 VFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLG 275
+F + +DV + MI Y +AG+ + A +F ++ +PN T T+V+ C
Sbjct: 357 LFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAA 416
Query: 276 VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISG 335
GK +H A+K + E+ A+++MY K G A + F+ + ++ +++ AL G
Sbjct: 417 SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQG 476
Query: 336 YVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD 395
Y + G KA + + G+C DS + ++ C+ CS+ G ++G IKHG+ S+
Sbjct: 477 YTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSE 536
Query: 396 VRLGTALVDIYAKGGDLKSARMLLD--GFSCKYTAEFNAILSGFMEKIADDEEDVMVLFS 453
+ AL++++ K L +A +L D GF K T +N +++G++ + E+ + F
Sbjct: 537 CHVAHALINMFTKCDALAAAIVLFDKCGFE-KSTVSWNIMMNGYL--LHGQAEEAVATFR 593
Query: 454 QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCG 513
Q ++ +P+ VTF ++ +A + L G S+H+ I+ G+ + VGN+L+ MYAKCG
Sbjct: 594 QMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCG 653
Query: 514 SIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQ 573
I+ + + F IS++ IVSWN MLSAYA HGL A+ LF M+ PD +S L VL
Sbjct: 654 MIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLS 713
Query: 574 ACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESP 633
AC ++GL E G +F E+ + + + +EH+ACMVDLLG+AG EA+ ++ S
Sbjct: 714 ACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSV 773
Query: 634 LLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTM 693
+W L++ S++ N S A +L+ LEP L + Y+ L E V
Sbjct: 774 GVWGALLNSSRMHCNLWLSNAALCQLVKLEP-------LNPSHYSQDRRLGEVNNVS--- 823
Query: 694 NDLRLSKEAGCSWIEI 709
R+ K CSWIE+
Sbjct: 824 ---RIKKVPACSWIEV 836
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 168/648 (25%), Positives = 308/648 (47%), Gaps = 38/648 (5%)
Query: 65 VKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSA 124
+K GS D K G +H + + G ++D + L+ +Y K L A+++FD M V+
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166
Query: 125 ITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAF 184
+TW +++ G +G + L + DM + + ++ A S LE +H
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGL 226
Query: 185 AIKSGFENNVFVGTS-LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEM 243
IK GF +F +S LI MY + AE+VF + KD M+ Y G E
Sbjct: 227 VIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEE 283
Query: 244 AFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVT 303
+F + + D N + + + +G +H AV+ G++ ++SV ++++
Sbjct: 284 VLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMS 343
Query: 304 MYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSC 363
MY K G E AE++F I +R+++SW+A+I+ Y ++G +AI+ F + + + I ++
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403
Query: 364 LATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFS 423
L +V+ GC+ + LG +H +AIK S++ TA++ +YAK G A +
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 424 CKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG 483
K FNA+ G+ + D ++ +L G+ PD T +L A + RG
Sbjct: 464 IKDAVAFNALAQGYTQ--IGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG 521
Query: 484 RSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYAL 542
++ IK G+ ++ V +ALI M+ KC ++ A +F ++ VSWN M++ Y L
Sbjct: 522 SCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581
Query: 543 HGLGKGALLLFEEMKREGFAPDDISILGVLQAC-----------IYSGLSEGGICLFNEI 591
HG + A+ F +MK E F P+ ++ + +++A ++S L + G C +
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPV 641
Query: 592 EQIYGLRPILEHFACMVDLLGRAGRL--SEAMNLINSSPFSESPLLWRTLVS--VSKLMA 647
+VD+ + G + SE + S+ + S W T++S + +A
Sbjct: 642 GN------------SLVDMYAKCGMIESSEKCFIEISNKYIVS---WNTMLSAYAAHGLA 686
Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMND 695
+ S+ S + +L+P D+ SF+ V + G+++E ++ M +
Sbjct: 687 SCAVSLFLSMQENELKP-DSVSFLSVLSACRHAGLVEEGKRIFEEMGE 733
Score = 202 bits (515), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 144/565 (25%), Positives = 276/565 (48%), Gaps = 14/565 (2%)
Query: 80 VHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGD 139
VH L+ SG + N LIN Y+ F R D+++ +FD + + W S+I+GY G
Sbjct: 24 VHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 140 YESVLGIACDMYRSEEK---FNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFV 196
+ LG Y SEEK ++++ + L+AC+ D G +IH + G E++V++
Sbjct: 80 HREALGFF--GYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 197 GTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDF 256
GT+L+ MY + A VF + KDV N M+ + G S A +F + S
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197
Query: 257 EPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAER 316
+ + + N+I + + + LHGL +K G + S G ++ MY AE
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAAES 255
Query: 317 MFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSN 376
+F+ + ++ SW +++ Y +G + + F + + + A+ + + +
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 377 LELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSG 436
L G+ +H +A++ G + DV + T+L+ +Y+K G+L+ A L + ++A+++
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 437 FMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYA 496
+ + A ++ + LF ++P+ VT + +L A A G+S+H Y+IK
Sbjct: 376 YEQ--AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 497 ADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEM 556
+++ A+I+MYAKCG A + F+ + +D V++NA+ Y G A +++ M
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Query: 557 KREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGR 616
K G PD +++G+LQ C + G C++ +I + +G ++++ +
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAHALINMFTKCDA 552
Query: 617 LSEAMNLINSSPFSESPLLWRTLVS 641
L+ A+ L + F +S + W +++
Sbjct: 553 LAAAIVLFDKCGFEKSTVSWNIMMN 577
Score = 169 bits (428), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 222/475 (46%), Gaps = 5/475 (1%)
Query: 72 GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
GDL G A+H + ++ G D A +L+++Y+K L++A++LF + R ++W+++I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
Y G ++ + + DM R K N T + +L+ C+ + G+ IH +AIK+ E
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
+ + T++ISMY G F A F L KD N + Y + G++ AF V+ ++
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
P+ T ++ C G ++G +K G E V +A++ M+ K
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDAL 553
Query: 312 EEAERMFDAIS-ERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
A +FD E++ +SW +++GY+ G +A+ F + ++ ++
Sbjct: 554 AAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRA 613
Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
+ S L +G+ +H I+ G+ S +G +LVD+YAK G ++S+ S KY +
Sbjct: 614 AAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSW 673
Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAY 489
N +LS + + LF + ++PD V+F +LS + G R
Sbjct: 674 NTMLSAYAAH--GLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEM 731
Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVS-WNAMLSAYALH 543
+ A+V ++ + K G A ++ + + + V W A+L++ +H
Sbjct: 732 GERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 13/216 (6%)
Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
C N LQ+HG I +S ++ L++ Y+ +R++ D +N++
Sbjct: 15 CKNFRCLLQVHGSLI----VSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSM 70
Query: 434 LSGFMEKIADDEEDVMVLF---SQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
+ G+ A + + F S+++ G++PD +F+ L A +G +H
Sbjct: 71 IRGYTR--AGLHREALGFFGYMSEEK--GIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126
Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
+ G +DV +G AL+ MY K + A Q+F + +D+V+WN M+S A +G AL
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186
Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGIC 586
LLF +M+ D +S+ ++ A S L + +C
Sbjct: 187 LLFHDMRSCCVDIDHVSLYNLIPA--VSKLEKSDVC 220
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 311 bits (796), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 206/685 (30%), Positives = 338/685 (49%), Gaps = 81/685 (11%)
Query: 84 LLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESV 143
LLK G +D E N I+ Y + R + A ++F M S++++ +I GYL +G++E
Sbjct: 56 LLKCGD-SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFE-- 112
Query: 144 LGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISM 203
+A ++ + + + +V+++ + +R G+ F I E +V +++S
Sbjct: 113 --LARKLFDEMPERDLVSWNVMIKG--YVRNRNLGKARELFEIMP--ERDVCSWNTMLSG 166
Query: 204 YFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF--------------- 248
Y +GC +A +VF + K+ N ++ Y + + E A +F
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 249 -----------VHLLSSDFEPNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREIS 296
D N I Y G ++E +QL + V+++
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESP----VQDVF 282
Query: 297 VGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLG 356
A+V+ Y ++ M EEA +FD + ERN +SW A+++GYV+ G+ + E D+
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ----GERMEMAKELFDVM 338
Query: 357 ICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSAR 416
C + S T+I G YA+ G + A+
Sbjct: 339 PCRNVSTWNTMITG-----------------------------------YAQCGKISEAK 363
Query: 417 MLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSAS 476
L D + + A+++G+ + + + + LF Q G + +FS LS A
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQ--SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 477 QACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAM 536
L G+ LH +K GY VGNAL+ MY KCGSI+ A +FK ++ +DIVSWN M
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 537 LSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYG 596
++ Y+ HG G+ AL FE MKREG PDD +++ VL AC ++GL + G F + Q YG
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYG 541
Query: 597 LRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILAS 656
+ P +H+ACMVDLLGRAG L +A NL+ + PF +W TL+ S++ N++ + A+
Sbjct: 542 VMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 601
Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
++ +EP+++G ++L+SN+YA G + K+R M D + K G SWIEI +K H F
Sbjct: 602 DKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTF 661
Query: 717 VASGKDHPESEEIYSKLDLLNDEMK 741
+ HPE +EI++ L+ L+ MK
Sbjct: 662 SVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/546 (22%), Positives = 228/546 (41%), Gaps = 78/546 (14%)
Query: 67 ISIGSGDLKLGQAVHAFLLKSGSQNDTFEA------------NNLINLYAKFNRLDVAQK 114
+ G D+K + +++G N+ N +I+ Y + ++A+K
Sbjct: 57 LKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARK 116
Query: 115 LFDGMLVRSAITWTSLIKGYLDD---GDYESVLGI-----ACDMYRSEEKFNEHTC---- 162
LFD M R ++W +IKGY+ + G + I C + ++ C
Sbjct: 117 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTS-----------LISMYFHSGCFR 211
+ + D + + A+ S E + S L+ +
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIV 236
Query: 212 EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCY 271
EA F + +DV N +I Y ++G+ + A +F D +T+T ++S
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYI 292
Query: 272 ENLGVEEGKQLHGL----------AVKFGVV-----------------REISVGNAIVTM 304
+N VEE ++L A+ G V R +S N ++T
Sbjct: 293 QNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG 352
Query: 305 YGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCL 364
Y + G EA+ +FD + +R+ +SW A+I+GY +SGH +A+ F++ G + S
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 365 ATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSC 424
++ + C+ LELG QLHG +K GY + +G AL+ +Y K G ++ A L +
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 472
Query: 425 KYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
K +N +++G+ E + F + G++PD T +LS + + +GR
Sbjct: 473 KDIVSWNTMIAGYSRHGFG--EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 485 SLHAYSIKTGYAADVIVGNA-----LITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLS 538
+ Y++ Y ++ N+ ++ + + G ++ A + K + + D W +L
Sbjct: 531 Q-YFYTMTQDYG---VMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 539 AYALHG 544
A +HG
Sbjct: 587 ASRVHG 592
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/636 (30%), Positives = 333/636 (52%), Gaps = 11/636 (1%)
Query: 76 LGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGY 134
+G VH +LK G +T + + Y+K L A +FD M R + WT++I G+
Sbjct: 143 VGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGH 202
Query: 135 LDDGDYESVLGIACDMYRSE---EKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
+ +G+ E LG C M+ + +K N T +ACS L G +H FA+K+G
Sbjct: 203 VQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLA 262
Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
++ FV +S+ S Y SG EA FR L +D+ +I ++G+ E +F +F +
Sbjct: 263 SSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
+ P+ + +I+ + + V +GK HG ++ + +V N++++MY K +
Sbjct: 323 QNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELL 382
Query: 312 EEAERMFDAISER-NLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
AE++F ISE N +W ++ GY + K I F + +LGI DS+ +VI
Sbjct: 383 SVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISS 442
Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSA-RMLLDGFSCKYTAE 429
CS + LG LH + +K + + +L+D+Y K GDL A RM + + T
Sbjct: 443 CSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVIT-- 500
Query: 430 FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAY 489
+NA+++ ++ + E + LF + +P +T LL + L RG+ +H Y
Sbjct: 501 WNAMIASYVH--CEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRY 558
Query: 490 SIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGA 549
+T + ++ + ALI MYAKCG ++ + ++F + +D V WN M+S Y +HG + A
Sbjct: 559 ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESA 618
Query: 550 LLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVD 609
+ LF++M+ P + L +L AC ++GL E G LF ++ Q Y ++P L+H++C+VD
Sbjct: 619 IALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVD 677
Query: 610 LLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGS 669
LL R+G L EA + + S PFS ++W TL+S + I ++R + +P++ G
Sbjct: 678 LLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY 737
Query: 670 FILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCS 705
+I+++NMY+ G +EA + R M + + K AG S
Sbjct: 738 YIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 159/626 (25%), Positives = 303/626 (48%), Gaps = 21/626 (3%)
Query: 81 HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
+A ++ G + F A+ LI+ YA + + +++ ++F + R W S+IK + +GDY
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-SGFENNVFVGTS 199
L M S + + T +++ AC+ L G +H +K GF+ N VG S
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESE--MAFHVFVHLLSSDFE 257
+ Y G ++A VF + +DV +I + + GESE + + +H SD +
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 258 -PNDYTFTNVISVCYENLG-VEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAE 315
PN T C NLG ++EG+ LHG AVK G+ V +++ + Y K G EA
Sbjct: 227 KPNPRTLECGFQAC-SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
Query: 316 RMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
F + + ++ SWT++I+ RSG ++ + F E + G+ D ++ +I+
Sbjct: 286 LSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMM 345
Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE-----F 430
+ G HGF I+H + D + +L+ +Y K L A L C+ + E +
Sbjct: 346 LVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLF----CRISEEGNKEAW 401
Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
N +L G+ + + LF + + G+E D + + ++S + ++ G+SLH Y
Sbjct: 402 NTMLKGYGKMKC--HVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYV 459
Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
+KT + V N+LI +Y K G + A+++F +D ++++WNAM+++Y + A+
Sbjct: 460 VKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAI 518
Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
LF+ M E F P I+++ +L AC+ +G E G + I + L A ++D+
Sbjct: 519 ALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDM 577
Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAG-S 669
+ G L ++ L ++ + + W ++S + + + +I ++ + + K G +
Sbjct: 578 YAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 670 FILVSNMYAGQGMLDEAAKVRTTMND 695
F+ + + G++++ K+ M+
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKMHQ 662
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 220/484 (45%), Gaps = 23/484 (4%)
Query: 72 GDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLI 131
G LK G+ +H F +K+G + F +++ + Y+K A F + +WTS+I
Sbjct: 244 GALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSII 303
Query: 132 KGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLE-DRIF----GEQIHAFAI 186
GD E DM+ + H V++ +C + E ++ G+ H F I
Sbjct: 304 ASLARSGDMEESF----DMFWEMQNKGMHPDGVVI-SCLINELGKMMLVPQGKAFHGFVI 358
Query: 187 KSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNKAGESEMAF 245
+ F + V SL+SMY AE +F ++ + + N M+ Y K
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCI 418
Query: 246 HVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMY 305
+F + + E + + T+VIS C V GK LH VK + ISV N+++ +Y
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478
Query: 306 GKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLA 365
GK G A RMF ++ N+I+W A+I+ YV KAI F + S L
Sbjct: 479 GKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLV 537
Query: 366 TVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCK 425
T++ C +LE G +H + + + ++ L AL+D+YAK G L+ +R L D + K
Sbjct: 538 TLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Query: 426 YTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRS 485
+N ++SG+ + D E + LF Q + ++P TF LLS + +G+
Sbjct: 598 DAVCWNVMISGY--GMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKK 655
Query: 486 L----HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAY 540
L H Y +K ++ + L+ + ++ G+++ A + D V W +LS+
Sbjct: 656 LFLKMHQYDVK----PNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC 711
Query: 541 ALHG 544
HG
Sbjct: 712 MTHG 715
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 157/320 (49%), Gaps = 11/320 (3%)
Query: 267 ISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNL 326
+ +C ++L +E ++ + L + G+ I V + +++ Y +G + R+F ++ R++
Sbjct: 31 VILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDI 90
Query: 327 ISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGF 386
W ++I + +G +++ F L G D V+ C+ +G +HG
Sbjct: 91 FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 387 AIKH-GYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDE 445
+KH G+ + +G + V Y+K G L+ A ++ D + + AI+SG ++ +
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQN--GES 208
Query: 446 EDVMVLFSQQRLAGME---PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
E + + AG + P+P T ++ L GR LH +++K G A+ V
Sbjct: 209 EGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ 268
Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
+++ + Y+K G+ A+ F+ + D D+ SW +++++ A G + + +F EM+ +G
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH 328
Query: 563 PDDISILGVLQACIYSGLSE 582
PD GV+ +C+ + L +
Sbjct: 329 PD-----GVVISCLINELGK 343
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
L+ + +G L+ GQ +H ++ ++ + + + LI++YAK L+ +++LFD +
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKD 598
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS---LLED--RIFG 178
A+ W +I GY GD ES + + M S+ K T +L AC+ L+E ++F
Sbjct: 599 AVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF- 657
Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYK-DVRCVNFMILEYNK 237
++H + +K ++ + L+ + SG EAE+ + + D ++
Sbjct: 658 LKMHQYDVKPNLKHY----SCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMT 713
Query: 238 AGESEMAFHVFVHLLSSDFEPNDY 261
GE EM + ++SD + + Y
Sbjct: 714 HGEFEMGIRMAERAVASDPQNDGY 737
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 309 bits (791), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 202/686 (29%), Positives = 340/686 (49%), Gaps = 13/686 (1%)
Query: 73 DLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
+L+ + +HA L+ S + + L+NLY + +A+ FD + R W +I
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 133 GYLDDGDYESVLG-IACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFE 191
GY G+ V+ + M S + T +L+AC + D G +IH A+K GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFM 182
Query: 192 NNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHL 251
+V+V SLI +Y A +F + +D+ N MI Y ++G ++ A + L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 252 LSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMS 311
+ D T +++S C E G +H ++K G+ E+ V N ++ +Y + G
Sbjct: 243 RAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 312 EEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGC 371
+ +++FD + R+LISW ++I Y + +AI+ F E I D L ++
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 372 SVCSNLELGLQLHGFAIKHGY-LSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEF 430
S ++ + GF ++ G+ L D+ +G A+V +YAK G + SAR + + +
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 431 NAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYS 490
N I+SG+ + E M ++ + + T+ +L + L +G LH
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEE-GEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
+K G DV V +L MY KCG ++ A +F I + V WN +++ + HG G+ A+
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 537
Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
+LF+EM EG PD I+ + +L AC +SGL + G F ++ YG+ P L+H+ CMVD+
Sbjct: 538 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597
Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSF 670
GRAG+L A+ I S +W L+S ++ N +AS+ L ++EP+ G
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 657
Query: 671 ILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIY 730
+L+SNMYA G + ++R+ + L K G S +E+D+K+ F + HP EE+Y
Sbjct: 658 VLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMY 717
Query: 731 SKLDLLNDEMKL--KVKDSSAFELQD 754
+L L ++K+ V D F LQD
Sbjct: 718 RELTALQAKLKMIGYVPDHR-FVLQD 742
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 191/406 (47%), Gaps = 8/406 (1%)
Query: 71 SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
+GD G +H++ +K G +++ F +N LI+LYA+F RL QK+FD M VR I+W S+
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG- 189
IK Y + + + +M S + + T + S L D + F ++ G
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 190 FENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVF- 248
F ++ +G +++ MY G A VF L DV N +I Y + G + A ++
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 249 VHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKH 308
+ + N T+ +V+ C + + +G +LHG +K G+ ++ V ++ MYGK
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 309 GMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVI 368
G E+A +F I N + W LI+ + GHG KA+ F E LD G+ D T++
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Query: 369 DGCSVCSNLELGLQ-LHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYT 427
CS ++ G +G ++ +VD+Y + G L++A + S +
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 428 AE-FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
A + A+LS D + + + L +EP+ V + LLS
Sbjct: 620 ASIWGALLSACRVHGNVDLGKI----ASEHLFEVEPEHVGYHVLLS 661
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 18/296 (6%)
Query: 374 CSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAI 433
C+NL+ LH + + +V + LV++Y G++ AR D + +N +
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 434 LSGFMEKIADDEEDVMVLFSQQRL-AGMEPDPVTFSRLLSLSASQAC--LVRGRSLHAYS 490
+SG+ A + +V+ FS L +G+ PD TF +L +AC ++ G +H +
Sbjct: 124 ISGYGR--AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL-----KACRTVIDGNKIHCLA 176
Query: 491 IKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGAL 550
+K G+ DV V +LI +Y++ ++ A +F + RD+ SWNAM+S Y G K AL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 551 LLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDL 610
L ++ A D ++++ +L AC +G G+ + + +GL L ++DL
Sbjct: 237 TLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDL 291
Query: 611 LGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANS--KFSILASKRLLDLEP 664
GRL + + + + + W +++ +L S+ RL ++P
Sbjct: 292 YAEFGRLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
W ++ +G L+ G +H LLK+G D F +L ++Y K RL+ A LF +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
+++ W +LI + G E + + +M K + T +L ACS
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 308 bits (790), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 308/593 (51%), Gaps = 25/593 (4%)
Query: 163 SVILEACSLLEDRIFGEQIHAFAIKSGF--ENNVFVGTSLISMYFHSGCFREAENVFRGL 220
+ + +AC+ + + G +H + + NV + LI+MY G A VF +
Sbjct: 63 AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTM 122
Query: 221 AYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGK 280
++V +I Y +AG + F +F +LS F PN++T ++V++ C E GK
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPGK 177
Query: 281 QLHGLAVKFGVVREISVGNAIVTMYGK---HGMSEEAERMFDAISERNLISWTALISGYV 337
Q+HGLA+K G+ I V NA+++MYG+ + EA +F+AI +NL++W ++I+ +
Sbjct: 178 QVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQ 237
Query: 338 RSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNL------ELGLQLHGFAIKHG 391
G KAI F+ G+ D + L + S+L + LQLH +K G
Sbjct: 238 CCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSG 297
Query: 392 YLSDVRLGTALVDIYAKGGD--LKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVM 449
++ + TAL+ +Y++ + ++ ++ C+ +N I++ F D E +
Sbjct: 298 LVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA---VYDPERAI 354
Query: 450 VLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMY 509
LF Q R + PD TFS +L A S+HA IK G+ AD ++ N+LI Y
Sbjct: 355 HLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAY 414
Query: 510 AKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISIL 569
AKCGS+D ++F + RD+VSWN+ML AY+LHG L +F++M PD + +
Sbjct: 415 AKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFI 471
Query: 570 GVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPF 629
+L AC ++G E G+ +F + + P L H+AC++D+L RA R +EA +I P
Sbjct: 472 ALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPM 531
Query: 630 SESPLLWRTLVSVSKLMANSKFSILASKRLLDL-EPKDAGSFILVSNMYAGQGMLDEAAK 688
++W L+ + N++ LA+ +L +L EP ++ S+I +SN+Y +G +EA
Sbjct: 532 DPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANL 591
Query: 689 VRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDEMK 741
M R+ KE SW EI +K+H F + G+ P+ E +Y +L L +K
Sbjct: 592 SIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLK 644
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 220/486 (45%), Gaps = 32/486 (6%)
Query: 89 SQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIAC 148
SQN AN LIN+YAK + A+++FD M R+ ++WT+LI GY+ G+ + +
Sbjct: 93 SQN-VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151
Query: 149 DMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMY--FH 206
M S NE T S +L +C G+Q+H A+K G +++V ++ISMY H
Sbjct: 152 SML-SHCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCH 206
Query: 207 SGCFR-EAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTN 265
G EA VF + +K++ N MI + + A VF+ + S + T N
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266
Query: 266 VISVCYENLGVEEGK------QLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
+ S Y++ + + QLH L VK G+V + V A++ +Y + M E+ +
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYK 324
Query: 320 AISE----RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCS 375
E R++++W +I+ + +AI+ F + + D ++V+ C+
Sbjct: 325 LFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383
Query: 376 NLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILS 435
L +H IK G+L+D L +L+ YAK G L + D + +N++L
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLK 443
Query: 436 GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRG-RSLHAYSIKTG 494
+ + + ++ +F + + PD TF LLS + + G R + K
Sbjct: 444 AY--SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPE 498
Query: 495 YAADVIVGNALITMYAKCGSIDGAFQIFKGIS-DRDIVSWNAMLSAYALHG---LGKGAL 550
+ +I M ++ A ++ K + D D V W A+L + HG LGK A
Sbjct: 499 TLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAA 558
Query: 551 LLFEEM 556
+E+
Sbjct: 559 DKLKEL 564
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 60 DW---PQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLF 116
DW ++K G + ++HA ++K G DT N+LI+ YAK LD+ ++F
Sbjct: 368 DWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVF 427
Query: 117 DGMLVRSAITWTSLIKGYLDDGDYESVLGI 146
D M R ++W S++K Y G +S+L +
Sbjct: 428 DDMDSRDVVSWNSMLKAYSLHGQVDSILPV 457
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 308 bits (790), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 198/631 (31%), Positives = 323/631 (51%), Gaps = 8/631 (1%)
Query: 81 HAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDY 140
H L +G D A L++LY F A+ +FD + W +++ Y + +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 141 ESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIK-SGFENNVFVGTS 199
V+ + + + ++++ S L+AC+ L+D G++IH +K F+N V G
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-- 181
Query: 200 LISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPN 259
L+ MY G + A VF + ++V C MI Y K E +F + ++ N
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 260 DYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFD 319
+YT+ +I C + + +GK HG VK G+ + +++ MY K G A R+F+
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 320 AISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLEL 379
S +L+ WTA+I GY +G +A++ F + + I + +A+V+ GC + NLEL
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 380 GLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFME 439
G +HG +IK G + D + ALV +YAK + A+ + + S K +N+I+SGF +
Sbjct: 362 GRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 440 KIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAA-- 497
+ E + LF + + P+ VT + L S AS L G SLHAYS+K G+ A
Sbjct: 421 NGSIHE--ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASS 478
Query: 498 DVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMK 557
V VG AL+ YAKCG A IF I +++ ++W+AM+ Y G G+L LFEEM
Sbjct: 479 SVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEML 538
Query: 558 REGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRL 617
++ P++ + +L AC ++G+ G F+ + + Y P +H+ CMVD+L RAG L
Sbjct: 539 KKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGEL 598
Query: 618 SEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMY 677
+A+++I P + + + + + K++LDL P DA ++LVSN+Y
Sbjct: 599 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLY 658
Query: 678 AGQGMLDEAAKVRTTMNDLRLSKEAGCSWIE 708
A G ++A +VR M LSK AG S +E
Sbjct: 659 ASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 203/414 (49%), Gaps = 7/414 (1%)
Query: 162 CSVILEACSLLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLA 221
C ++L C+ ++ Q H +G ++ + T L+S+Y G ++A VF +
Sbjct: 47 CFLLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIP 103
Query: 222 YKDVRCVNFMILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQ 281
D M+ Y ES ++ L+ F +D F+ + C E ++ GK+
Sbjct: 104 EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK 163
Query: 282 LHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGH 341
+H VK + V ++ MY K G + A ++F+ I+ RN++ WT++I+GYV++
Sbjct: 164 IHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 342 GGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTA 401
+ + F + + + T+I C+ S L G HG +K G L T+
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 402 LVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGME 461
L+D+Y K GD+ +AR + + S + A++ G+ + +E + LF + + ++
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE--ALSLFQKMKGVEIK 340
Query: 462 PDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQI 521
P+ VT + +LS L GRS+H SIK G D V NAL+ MYAKC A +
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYV 399
Query: 522 FKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQAC 575
F+ S++DIV+WN+++S ++ +G AL LF M E P+ +++ + AC
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 187/404 (46%), Gaps = 11/404 (2%)
Query: 74 LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKG 133
L G+ H L+KSG + + +L+++Y K + A+++F+ + WT++I G
Sbjct: 258 LHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVG 317
Query: 134 YLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSG-FEN 192
Y +G L + M E K N T + +L C L+E+ G +H +IK G ++
Sbjct: 318 YTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT 377
Query: 193 NVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVHLL 252
N V +L+ MY R+A+ VF + KD+ N +I +++ G A +F +
Sbjct: 378 N--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 253 SSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVV--REISVGNAIVTMYGKHGM 310
S PN T ++ S C + G LH +VK G + + VG A++ Y K G
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
+ A +FD I E+N I+W+A+I GY + G ++ F E L + S +++
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 371 CSVCSNLELGLQLHGFAIK-HGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAE 429
C + G + K + + + T +VD+ A+ G+L+ A +++ +
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 615
Query: 430 -FNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLS 472
F A L G D ++++ +++ + PD ++ L+S
Sbjct: 616 CFGAFLHGCGMHSRFDLGEIVI----KKMLDLHPDDASYYVLVS 655
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 213/691 (30%), Positives = 359/691 (51%), Gaps = 23/691 (3%)
Query: 61 WPQLVKISIGSGD-LKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGM 119
+P +++ GS + L +G VH ++K G +D +L+ +Y + L A+K+FDGM
Sbjct: 103 FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM 162
Query: 120 LVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGE 179
VR + W++L+ L++G+ L + M + + T ++E C+ L
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 180 QIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
+H + F+ + + SL++MY G +E +F +A K+ MI YN+
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 240 ESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREI---- 295
SE A F ++ S EPN T +V+S C + EGK +HG AV+ RE+
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR----RELDPNY 338
Query: 296 -SVGNAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLD 354
S+ A+V +Y + G + E + +S+RN+++W +LIS Y G +A+ F + +
Sbjct: 339 ESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 355 LGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKS 414
I D+ LA+ I C + LG Q+HG I+ +SD + +L+D+Y+K G + S
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDS 457
Query: 415 ARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLS 474
A + + + +N++L GF + + + + LF + +E + VTF ++
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQN--GNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 475 ASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWN 534
+S L +G+ +H I +G D+ ALI MYAKCG ++ A +F+ +S R IVSW+
Sbjct: 516 SSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS 574
Query: 535 AMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQI 594
+M++AY +HG A+ F +M G P+++ + VL AC +SG E G FN ++
Sbjct: 575 SMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS- 633
Query: 595 YGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSIL 654
+G+ P EHFAC +DLL R+G L EA I PF +W +LV+ ++ + K I+
Sbjct: 634 FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRI--HQKMDII 691
Query: 655 ASKR--LLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSK 712
+ + L D+ D G + L+SN+YA +G +E ++R+ M L K G S IEID K
Sbjct: 692 KAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQK 751
Query: 713 LHHFVASGKDHPESEEIYSKL----DLLNDE 739
+ F A ++ +++EIY L +L N+E
Sbjct: 752 VFRFGAGEENRIQTDEIYRFLGNLQNLTNEE 782
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 274/554 (49%), Gaps = 16/554 (2%)
Query: 74 LKLGQAVHAFLLKSGS-QNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSLIK 132
L+L +HA LL +G + D LI YA D ++ +F+ + + LIK
Sbjct: 14 LRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIK 73
Query: 133 GYLDDGDYESVLGIACDMYR----SEEKFNEHTCSVILEACSLLEDRI-FGEQIHAFAIK 187
+ + +L A D+Y + ++ +L AC+ + + G ++H IK
Sbjct: 74 CNV----WCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIK 129
Query: 188 SGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHV 247
G +++ + TSL+ MY +G +AE VF G+ +D+ + ++ + GE A +
Sbjct: 130 GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRM 189
Query: 248 FVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGK 307
F ++ EP+ T +V+ C E + + +HG + + ++ N+++TMY K
Sbjct: 190 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSK 249
Query: 308 HGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATV 367
G +ER+F+ I+++N +SWTA+IS Y R KA+ F E + GI + L +V
Sbjct: 250 CGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSV 309
Query: 368 IDGCSVCSNLELGLQLHGFAIKHGYLSDVR-LGTALVDIYAKGGDLKSARMLLDGFSCKY 426
+ C + + G +HGFA++ + L ALV++YA+ G L +L S +
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN 369
Query: 427 TAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGRSL 486
+N+++S + + + + LF Q ++PD T + +S + + G+ +
Sbjct: 370 IVAWNSLISLYAHRGMVIQ--ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Query: 487 HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLG 546
H + I+T +D V N+LI MY+K GS+D A +F I R +V+WN+ML ++ +G
Sbjct: 428 HGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNS 486
Query: 547 KGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRPILEHFAC 606
A+ LF+ M ++++ L V+QAC G E G + +++ I GL+ + A
Sbjct: 487 VEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL-IISGLKDLFTDTA- 544
Query: 607 MVDLLGRAGRLSEA 620
++D+ + G L+ A
Sbjct: 545 LIDMYAKCGDLNAA 558
>sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800
OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1
Length = 896
Score = 306 bits (783), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 210/736 (28%), Positives = 369/736 (50%), Gaps = 52/736 (7%)
Query: 64 LVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRS 123
L+++S D+++ +AVHA LK + T N LI+ Y K A +F + +
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKL-REEKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 124 AITWTSLIKGYLDDGDYESVLGIACDMYRSE-EKFNEHTCSVILEACSLLEDRIFGEQIH 182
+++T+LI G+ L + M ++ + NE+T IL AC + G QIH
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Query: 183 AFAIKSGFENNVFVGTSLISMYFH---SGCFREAENVFRGLAYKDVRCVNFMILEYNKAG 239
+KSGF N+VFV SL+S+Y S C + +F + +DV N ++ K G
Sbjct: 205 GLIVKSGFLNSVFVSNSLMSLYDKDSGSSC-DDVLKLFDEIPQRDVASWNTVVSSLVKEG 263
Query: 240 ESEMAFHVFVHLLSSD-FEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
+S AF +F + + F + +T + ++S C ++ + G++LHG A++ G+++E+SV
Sbjct: 264 KSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVN 323
Query: 299 NAIVTMYGKH-------------------------------GMSEEAERMFDAISERNLI 327
NA++ Y K GM + A +F ++E+N I
Sbjct: 324 NALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTI 383
Query: 328 SWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFA 387
++ AL++G+ R+GHG KA+ F + L G+ L + +D C + S ++ Q+HGF
Sbjct: 384 TYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFC 443
Query: 388 IKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKY--TAEFNAILSGFMEKIADDE 445
IK G + + TAL+D+ + + A + D + + +I+ G+ D+
Sbjct: 444 IKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDK 503
Query: 446 EDVMVLFS----QQRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIV 501
+ LF +Q+L D V+ + +L++ + G +H Y++K GY +D+ +
Sbjct: 504 --AVSLFHRTLCEQKLF---LDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISL 558
Query: 502 GNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGF 561
GN+LI+MYAKC D A +IF + + D++SWN+++S Y L G AL L+ M +
Sbjct: 559 GNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEI 618
Query: 562 APDDISILGVLQACIYSGLSEGGIC--LFNEIEQIYGLRPILEHFACMVDLLGRAGRLSE 619
PD I++ V+ A Y+ ++ C LF ++ IY + P EH+ V +LG G L E
Sbjct: 619 KPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEE 678
Query: 620 AMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRLLDLEPKDAGSFILVSNMYAG 679
A + INS P + R L+ ++ +N+ + +K +L +P+ +IL SN+Y+
Sbjct: 679 AEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSA 738
Query: 680 QGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVASGKDHPESEEIYSKLDLLNDE 739
G + +R M + K SWI ++K+H F A HP+ ++IY L++L E
Sbjct: 739 SGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIME 798
Query: 740 -MKLKVKDSSAFELQD 754
+K+ + ++ + LQ+
Sbjct: 799 CLKVGYEPNTEYVLQE 814
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 467 FSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGIS 526
F LL LSA + +++HA +K +GNALI+ Y K G A +F +S
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 527 DRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA-PDDISILGVLQACIYSGLSEGGI 585
+VS+ A++S ++ L AL +F M++ G P++ + + +L AC+ GI
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 586 CLFNEIEQIYGL 597
QI+GL
Sbjct: 202 -------QIHGL 206
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 48 SVSCSERTL----LFNDWPQLVKISIGSGDL---KLGQAVHAFLLKSGSQNDTFEANNLI 100
+VS RTL LF D L I G L ++G +H + LK+G +D N+LI
Sbjct: 504 AVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLI 563
Query: 101 NLYAKFNRLDVAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEH 160
++YAK D A K+F+ M I+W SLI Y+ + + L + M E K +
Sbjct: 564 SMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDII 623
Query: 161 TCSVILEACSLLEDRIFGEQIHAF-AIKSGF--ENNVFVGTSLISMYFHSGCFREAENVF 217
T ++++ A E F ++K+ + E T+ + + H G EAE+
Sbjct: 624 TLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTI 683
Query: 218 RGL 220
+
Sbjct: 684 NSM 686
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 304 bits (779), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/630 (30%), Positives = 319/630 (50%), Gaps = 5/630 (0%)
Query: 111 VAQKLFDGMLVRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACS 170
+ ++L+ + S W I+ ++ D L + +M R + N T + +AC+
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 171 LLEDRIFGEQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNF 230
L D E +HA IKS F ++VFVGT+ + M+ A VF + +D N
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 231 MILEYNKAGESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFG 290
M+ + ++G ++ AF +F + ++ P+ T +I ++ + +H + ++ G
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 291 VVREISVGNAIVTMYGKHGMSEEAERMFDAIS--ERNLISWTALISGYVRSGHGGKAING 348
V +++V N ++ YGK G + A+ +F+AI +R ++SW ++ Y G A
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 349 FLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK 408
+ L D S + C L G +H AI G D+ + +Y+K
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSK 303
Query: 409 GGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFS 468
D SAR+L D + + + ++SG+ EK D ++ + LF +G +PD VT
Sbjct: 304 SEDTCSARLLFDIMTSRTCVSWTVMISGYAEK--GDMDEALALFHAMIKSGEKPDLVTLL 361
Query: 469 RLLSLSASQACLVRGRSLHAYSIKTGYAAD-VIVGNALITMYAKCGSIDGAFQIFKGISD 527
L+S L G+ + A + G D V++ NALI MY+KCGSI A IF +
Sbjct: 362 SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 421
Query: 528 RDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL 587
+ +V+W M++ YAL+G+ AL LF +M + P+ I+ L VLQAC +SG E G
Sbjct: 422 KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEY 481
Query: 588 FNEIEQIYGLRPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMA 647
F+ ++Q+Y + P L+H++CMVDLLGR G+L EA+ LI + +W L++ K+
Sbjct: 482 FHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHR 541
Query: 648 NSKFSILASKRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWI 707
N K + A++ L +LEP+ A ++ ++N+YA GM D A++R+ M + K G S I
Sbjct: 542 NVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601
Query: 708 EIDSKLHHFVASGKDHPESEEIYSKLDLLN 737
+++ K H F H E+E IY L+ L+
Sbjct: 602 QVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 229/492 (46%), Gaps = 15/492 (3%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
+P + K D+ + VHA L+KS +D F ++++ K N +D A K+F+ M
Sbjct: 55 FPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP 114
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
R A TW +++ G+ G + + +M +E + T ++++ S + E
Sbjct: 115 ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA 174
Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCV--NFMILEYNKA 238
+HA I+ G + V V + IS Y G A+ VF + D V N M Y+
Sbjct: 175 MHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVF 234
Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
GE+ AF ++ +L +F+P+ TF N+ + C + +G+ +H A+ G ++I
Sbjct: 235 GEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAI 294
Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
N ++MY K + A +FD ++ R +SWT +ISGY G +A+ F + G
Sbjct: 295 NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK 354
Query: 359 CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSD-VRLGTALVDIYAKGGDLKSARM 417
D L ++I GC +LE G + A +G D V + AL+D+Y+K G + AR
Sbjct: 355 PDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 414
Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
+ D K + +++G+ + + + LFS+ +P+ +TF +L A
Sbjct: 415 IFDNTPEKTVVTWTTMIAGY--ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHS 472
Query: 478 ACLVRGRSL-----HAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDR-DIV 531
L +G Y+I G + ++ + + G ++ A ++ + +S + D
Sbjct: 473 GSLEKGWEYFHIMKQVYNISPGLDH----YSCMVDLLGRKGKLEEALELIRNMSAKPDAG 528
Query: 532 SWNAMLSAYALH 543
W A+L+A +H
Sbjct: 529 IWGALLNACKIH 540
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/683 (28%), Positives = 349/683 (51%), Gaps = 5/683 (0%)
Query: 61 WPQLVKISIGSGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGML 120
+ +V+ G D+ G VH ++K+G + ++ ++L +LY+K + A +LF +
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 121 VRSAITWTSLIKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQ 180
I+WT +I + + L +M ++ NE T +L A S L FG+
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLE-FGKT 245
Query: 181 IHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE 240
IH+ I G NV + TSL+ Y +A V +DV ++ + +
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 241 SEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNA 300
++ A F+ + S +PN++T++ ++S+C ++ GKQ+H +K G VGNA
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 301 IVTMYGKHGMSE-EAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICC 359
+V MY K SE EA R+F A+ N++SWT LI G V G +E + +
Sbjct: 366 LVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425
Query: 360 DSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLL 419
+ L+ V+ CS ++ L++H + ++ ++ +G +LVD YA + A ++
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVI 485
Query: 420 DGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQAC 479
+ + ++++ F E E + + + G+ D ++ +S SA+
Sbjct: 486 RSMKRRDNITYTSLVTRFNE--LGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 480 LVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSA 539
L G+ LH YS+K+G++ V N+L+ MY+KCGS++ A ++F+ I+ D+VSWN ++S
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 540 YALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGLRP 599
A +G AL FEEM+ + PD ++ L +L AC L++ G+ F +++IY + P
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663
Query: 600 ILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVSVSKLMANSKFSILASKRL 659
+EH+ +V +LGRAGRL EA ++ + + ++++TL+ + N + +
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKG 723
Query: 660 LDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHFVAS 719
L L P D +IL++++Y G + A K R M + RLSK+ G S +E+ K+H FV+
Sbjct: 724 LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSE 783
Query: 720 GKDH-PESEEIYSKLDLLNDEMK 741
++ IY++++ + +E+K
Sbjct: 784 DVTRVDKTNGIYAEIESIKEEIK 806
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 163/620 (26%), Positives = 294/620 (47%), Gaps = 22/620 (3%)
Query: 71 SGDLKLGQAVHAFLLKSGSQNDTFEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL 130
S ++G +H ++K G + NNL++LY K + + A+KLFD M R+ WT +
Sbjct: 36 SNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVM 95
Query: 131 IKGYLDDGDYESVLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFGEQIHAFAIKSGF 190
I + ++ S L + +M S NE T S ++ +C+ L D +G ++H IK+GF
Sbjct: 96 ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155
Query: 191 ENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGESEMAFHVFVH 250
E N VG+SL +Y G F+EA +F L D MI A + A +
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE 215
Query: 251 LLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGM 310
++ + PN++TF ++ LG+E GK +H + G+ + + ++V Y +
Sbjct: 216 MVKAGVPPNEFTFVKLLGAS-SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK 274
Query: 311 SEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDG 370
E+A R+ ++ E+++ WT+++SG+VR+ +A+ FLE LG+ ++ + ++
Sbjct: 275 MEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSL 334
Query: 371 CSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAK--GGDLKSARMLLDGFSCKYTA 428
CS +L+ G Q+H IK G+ +G ALVD+Y K +++++R+ S +
Sbjct: 335 CSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVS 394
Query: 429 EFNAILS----GFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQACLVRGR 484
IL GF+ +D L + +EP+ VT S +L + + R
Sbjct: 395 WTTLILGLVDHGFV-------QDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 485 SLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHG 544
+HAY ++ +++VGN+L+ YA +D A+ + + + RD +++ ++++ + G
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 545 LGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICL--FNEIEQIYGLRPILE 602
+ AL + M +G D +S+ G + A G E G L ++ G +L
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 603 HFACMVDLLGRAGRLSEAMNLINSSPFSESPLLWRTLVS--VSKLMANSKFSILASKRLL 660
+VD+ + G L +A + + + W LVS S +S S R+
Sbjct: 568 ---SLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMK 623
Query: 661 DLEPKDAGSFILVSNMYAGQ 680
+ EP IL+S G+
Sbjct: 624 ETEPDSVTFLILLSACSNGR 643
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 199/681 (29%), Positives = 346/681 (50%), Gaps = 10/681 (1%)
Query: 63 QLVKISIGSGDLKLGQAVHAFLLKSGSQNDT---FEANNLINLYAKFNRLDVAQKLFDGM 119
+L + + LK + +HA +L +G+ T + NNLI++Y + L+ A+K+FD M
Sbjct: 99 ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKM 158
Query: 120 LVRSAITWTSLIKGYLDDGDYES-VLGIACDMYRSEEKFNEHTCSVILEACSLLEDRIFG 178
R+ +++ +L Y + D+ S + M K N T + +++ C++LED + G
Sbjct: 159 PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMG 218
Query: 179 EQIHAFAIKSGFENNVFVGTSLISMYFHSGCFREAENVFRGLAYKDVRCVNFMILEYNKA 238
+++ IK G+ +NV V TS++ MY G A +F + +D N MI+ K
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 239 GESEMAFHVFVHLLSSDFEPNDYTFTNVISVCYENLGVEEGKQLHGLAVKFGVVREISVG 298
+ E F ++L S +P +T++ V++ C + GK +H + + ++ +
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338
Query: 299 NAIVTMYGKHGMSEEAERMFDAISERNLISWTALISGYVRSGHGGKAINGFLEFLDLGIC 358
NA++ MY G EA +F I NL+SW ++ISG +G G +A+ + L +
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 359 -CDSSCLATVIDGCSVCSNLELGLQLHGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARM 417
D + I + G LHG K GY V +GT L+ +Y K + +SA+
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 418 LLDGFSCKYTAEFNAILSGFMEKIADDEEDVMVLFSQQRLAGMEPDPVTFSRLLSLSASQ 477
+ D + + ++ G ++ + E V R D + S ++ +
Sbjct: 459 VFDVMKERDVVLWTEMIVGH-SRLGNSELAVQFFIEMYREKN-RSDGFSLSSVIGACSDM 516
Query: 478 ACLVRGRSLHAYSIKTGYAADVIVGNALITMYAKCGSIDGAFQIFKGISDRDIVSWNAML 537
A L +G H +I+TG+ + V AL+ MY K G + A IF S+ D+ WN+ML
Sbjct: 517 AMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSML 576
Query: 538 SAYALHGLGKGALLLFEEMKREGFAPDDISILGVLQACIYSGLSEGGICLFNEIEQIYGL 597
AY+ HG+ + AL FE++ GF PD ++ L +L AC + G + G L+N++++ G+
Sbjct: 577 GAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGI 635
Query: 598 RPILEHFACMVDLLGRAGRLSEAMNLINSSPFSESPL-LWRTLVSVSKLMANSKFSILAS 656
+ +H++CMV+L+ +AG + EA+ LI SP + LWRTL+S N + + A+
Sbjct: 636 KAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAA 695
Query: 657 KRLLDLEPKDAGSFILVSNMYAGQGMLDEAAKVRTTMNDLRLSKEAGCSWIEIDSKLHHF 716
+++L L+P+D + IL+SN+YA G ++ A++R + L SK+ G SWIE+++
Sbjct: 696 EQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQV 755
Query: 717 VASGKDHPESEEIYSKLDLLN 737
+SG D E + D LN
Sbjct: 756 FSSG-DQSNPEVVSQAQDELN 775
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 144/539 (26%), Positives = 251/539 (46%), Gaps = 16/539 (2%)
Query: 94 FEANNLINLYAKFNRLDVAQKLFDGMLVRSAITWTSL--IKGYLDDGD--YESVLGIACD 149
+ NNLI++Y + + L+ A+K+FD M R+ +T L + Y+ G + ++ +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 150 MYRSEEKFNEHTCSVI--LEACSLLEDRIFGEQIHAFAIKSG---FENNVFVGTSLISMY 204
NE SV+ C + QIHA + +G + + +LISMY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 205 FHSGCFREAENVFRGLAYKDVRCVNFMILEYNKAGE-SEMAFHVFVHLLSSDFEPNDYTF 263
G +A VF + +++V N + Y++ + + AF + H+ +PN TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 264 TNVISVCYENLGVEEGKQLHGLAVKFGVVREISVGNAIVTMYGKHGMSEEAERMFDAISE 323
T+++ VC V G L+ +K G + V +++ MY G E A R+FD ++
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 324 RNLISWTALISGYVRSGHGGKAINGFLEFLDLGICCDSSCLATVIDGCSVCSNLELGLQL 383
R+ ++W +I G +++ + F L G+ + V++GCS + LG +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 384 HGFAIKHGYLSDVRLGTALVDIYAKGGDLKSARMLLDGFSCKYTAEFNAILSGFMEKIAD 443
H I L+D+ L AL+D+Y GD++ A + +N+I+SG E
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN--G 380
Query: 444 DEEDVMVLFSQ-QRLAGMEPDPVTFSRLLSLSASQACLVRGRSLHAYSIKTGYAADVIVG 502
E M+++ + R++ PD TFS +S +A V G+ LH K GY V VG
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 503 NALITMYAKCGSIDGAFQIFKGISDRDIVSWNAMLSAYALHGLGKGALLLFEEMKREGFA 562
L++MY K + A ++F + +RD+V W M+ ++ G + A+ F EM RE
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 563 PDDISILGVLQACI-YSGLSEGGICLFNEIEQIYGLRPILEHFACMVDLLGRAGRLSEA 620
D S+ V+ AC + L +G + F+ + G ++ +VD+ G+ G+ A
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQGEV--FHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA 557
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 275,606,376
Number of Sequences: 539616
Number of extensions: 11689921
Number of successful extensions: 33459
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 25958
Number of HSP's gapped (non-prelim): 2386
length of query: 754
length of database: 191,569,459
effective HSP length: 125
effective length of query: 629
effective length of database: 124,117,459
effective search space: 78069881711
effective search space used: 78069881711
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)