Query 004430
Match_columns 754
No_of_seqs 386 out of 2238
Neff 5.2
Searched_HMMs 13730
Date Tue Mar 26 00:59:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004430.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004430hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uyla_ d.122.1.1 (A:) HSP90 { 99.9 1E-24 7.5E-29 218.4 11.4 165 242-415 12-203 (208)
2 d2iwxa1 d.122.1.1 (A:2-214) HS 99.9 1.4E-24 1E-28 218.2 11.0 170 237-415 7-205 (213)
3 d2gqpa1 d.122.1.1 (A:74-337) H 99.9 6.3E-24 4.6E-28 215.2 9.6 168 237-415 5-207 (227)
4 d1b63a2 d.122.1.2 (A:-2-216) D 99.4 9.2E-14 6.7E-18 139.1 9.9 141 234-387 3-150 (218)
5 d1h7sa2 d.122.1.2 (A:29-231) D 99.4 1.6E-13 1.1E-17 135.7 10.2 93 252-353 4-101 (203)
6 d2hkja3 d.122.1.2 (A:10-228) T 99.1 3.5E-10 2.6E-14 112.1 12.4 98 254-355 22-129 (219)
7 d1bxda_ d.122.1.3 (A:) Histidi 98.0 4.8E-06 3.5E-10 78.2 7.2 87 255-351 48-138 (161)
8 d1pvga2 d.122.1.2 (A:7-245) DN 97.9 2E-05 1.5E-09 78.8 10.6 86 255-349 54-155 (239)
9 d1kija2 d.122.1.2 (A:9-220) DN 97.7 7.9E-05 5.8E-09 73.0 11.1 121 255-389 27-165 (212)
10 d1ysra1 d.122.1.3 (A:299-446) 97.7 2.9E-05 2.1E-09 71.6 7.3 86 255-351 45-135 (148)
11 d1id0a_ d.122.1.3 (A:) Histidi 97.7 3.2E-05 2.3E-09 71.2 7.3 84 255-349 45-131 (146)
12 d1jm6a2 d.122.1.4 (A:1177-1366 97.6 3.7E-05 2.7E-09 73.7 7.2 90 255-350 61-166 (190)
13 d2c2aa2 d.122.1.3 (A:321-481) 97.6 3.5E-05 2.5E-09 71.8 6.5 89 255-351 50-147 (161)
14 d1gkza2 d.122.1.4 (A:186-378) 97.6 2E-05 1.4E-09 75.0 4.8 58 255-318 54-121 (193)
15 d1ei1a2 d.122.1.2 (A:2-220) DN 97.6 0.00011 7.8E-09 72.5 9.8 122 254-389 34-171 (219)
16 d1y8oa2 d.122.1.4 (A:177-301) 97.3 0.00011 8.2E-09 63.7 5.9 50 256-311 66-125 (125)
17 d1s14a_ d.122.1.2 (A:) Topoiso 97.2 0.00038 2.8E-08 66.0 8.4 143 255-437 6-158 (168)
18 d1th8a_ d.122.1.3 (A:) Anti-si 96.6 0.00098 7.2E-08 60.3 5.9 83 255-351 40-127 (139)
19 d1ixma_ d.123.1.1 (A:) Sporula 96.5 0.00067 4.9E-08 60.6 3.5 58 255-316 98-159 (179)
20 d1r62a_ d.122.1.3 (A:) Nitroge 96.4 0.0002 1.4E-08 66.0 -0.4 87 255-350 45-143 (156)
21 d1we9a_ g.50.1.2 (A:) PHD fing 87.9 0.1 7.3E-06 40.7 2.0 36 640-675 16-54 (64)
22 d1weea_ g.50.1.2 (A:) PHD fing 85.5 0.26 1.9E-05 39.2 3.3 33 642-674 27-61 (72)
23 d1wepa_ g.50.1.2 (A:) PHD fing 84.3 0.071 5.2E-06 43.6 -0.7 35 641-675 22-59 (79)
24 d1wema_ g.50.1.2 (A:) Death as 63.8 0.94 6.9E-05 35.8 0.9 32 643-674 27-65 (76)
25 d1mm2a_ g.50.1.2 (A:) Mi2-beta 55.5 3 0.00022 31.7 2.5 33 643-675 18-52 (61)
26 d1f62a_ g.50.1.2 (A:) Williams 36.3 4.7 0.00034 29.3 0.8 29 644-674 13-45 (51)
27 d1weva_ g.50.1.2 (A:) PHD fing 33.6 11 0.00078 30.2 2.6 33 643-675 30-68 (88)
28 d1ow1a_ b.131.1.3 (A:) SMART/H 31.0 15 0.0011 33.8 3.4 48 68-116 76-138 (170)
29 d1wewa_ g.50.1.2 (A:) Sumoylat 28.6 7.3 0.00053 30.8 0.7 31 645-675 29-68 (78)
No 1
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=1e-24 Score=218.45 Aligned_cols=165 Identities=24% Similarity=0.310 Sum_probs=128.4
Q ss_pred HHHHHhhccccCCHHHHHHHHHhcccccCC----------------CccEEEEEecccccCCCCcCEEEEEeCCCCCCHH
Q 004430 242 SYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQ 305 (754)
Q Consensus 242 ~fL~slst~hi~~pf~AIaELIDNA~DAgA----------------t~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~e 305 (754)
+.|+.+..+.|+++..+|||||+||.||.. ....|.|.. +.+..+|+|.|||+||+.+
T Consensus 12 ~ll~ll~~slYs~~~iflRELIqNa~DA~~k~~~~~~~~~~~~~~~~~~~i~i~~------d~~~~~l~I~DnGiGMt~~ 85 (208)
T d1uyla_ 12 QLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIP------NKQDRTLTIVDTGIGMTKA 85 (208)
T ss_dssp HHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEE------ETTTTEEEEEECSCCCCHH
T ss_pred HHHHHHHHhhcCCchHhHHHHHhhHHHHHHHHHHHhcCCchhccCCcccceEEee------cCCccEEEEEcCCccccHH
Confidence 466777888899999999999999999931 334455543 3457899999999999999
Q ss_pred hHHHhhh-cccCCC--------CCCCCCcccccCceeeeecccccceEEEEEeeCCCCceeEEEEEecCCCeeEEEeccc
Q 004430 306 DVVRMTY-FGHKQP--------DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVS 376 (754)
Q Consensus 306 eL~~~l~-fG~S~k--------~~~~~~~IGqfGvGfKsAsmrLg~~v~V~SK~~g~~sv~~ls~sf~~g~~~i~VPi~~ 376 (754)
++.+.|+ +|.|.+ ...+...||||||||+|++| ++++|.|.||+.+.....++|.. .+...+......
T Consensus 86 el~~~LgtIa~Sg~~~f~~~~~~~~~~~~IGqFGVGFyS~Fm-Vad~v~V~sk~~~~~~~~~~~~~--~~~~~~~~~~~~ 162 (208)
T d1uyla_ 86 DLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVTVITKHNDDEQYAWESSA--GGSFTVRTDTGE 162 (208)
T ss_dssp HHHTGGGSCHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTSCCEEEEECS--TTEEEEEECCSS
T ss_pred HHHhhcccccccchHHHHHhhhhccchhhhhhcccceEEeee-ccCceEEEEecCCcchheeeecc--CCCceEEecccc
Confidence 9998774 555532 12356899999999999999 99999999998887655555543 344455555445
Q ss_pred cCCCCcEEEEEecccc-chhhhhhhhh-hhhcCCCchhhHH
Q 004430 377 YYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 415 (754)
Q Consensus 377 ~~~~Gt~I~l~l~~~~-e~~~~~~L~~-I~kySpF~s~pI~ 415 (754)
...+||.|+|+++++. ++..++.++. |.+||.|..+||.
T Consensus 163 ~~~~GT~I~L~lk~d~~efl~~~~i~~likkys~fi~~PI~ 203 (208)
T d1uyla_ 163 PMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPIT 203 (208)
T ss_dssp CCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEE
T ss_pred cCCCCcEEEEEeCCChHHHcCHHHHHHHHHHHhcccCcCeE
Confidence 5578999999999875 6777888865 9999999999886
No 2
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.90 E-value=1.4e-24 Score=218.21 Aligned_cols=170 Identities=22% Similarity=0.298 Sum_probs=129.8
Q ss_pred eecCH-HHHHHhhccccCCHHHHHHHHHhcccccCC----------------CccEEEEEecccccCCCCcCEEEEEeCC
Q 004430 237 VRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDDG 299 (754)
Q Consensus 237 ~~v~p-~fL~slst~hi~~pf~AIaELIDNA~DAgA----------------t~V~I~I~~~~~~~~~~~~~~L~I~DNG 299 (754)
|+++. +.|+.++.+.|+++..||+|||+||+||.+ ..+.|.+.. +.+...|+|.|||
T Consensus 7 Fqae~~~ll~ll~~~lYs~~~iflRELiqNa~DA~~~~~~~~~~~~~~~~~~~~~~I~i~~------d~~~~~l~i~DnG 80 (213)
T d2iwxa1 7 FQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITP------KPEQKVLEIRDSG 80 (213)
T ss_dssp CCHHHHHHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHTTTCGGGGTTSCCCCEEEEE------EGGGTEEEEEECS
T ss_pred ehhhHHHHHHHHHHhhcCCchHHHHHHHHhHHHHHHHHHHhhccCcccccCCccccccccc------ccccceeEEecCC
Confidence 55554 477888888999999999999999999942 344455543 2357899999999
Q ss_pred CCCCHHhHHHhh-hcccCCCC--------CCCCCcccccCceeeeecccccceEEEEEeeCCCCceeEEEEEecCCCeeE
Q 004430 300 HGMTHQDVVRMT-YFGHKQPD--------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNL 370 (754)
Q Consensus 300 ~GMt~eeL~~~l-~fG~S~k~--------~~~~~~IGqfGvGfKsAsmrLg~~v~V~SK~~g~~sv~~ls~sf~~g~~~i 370 (754)
+||+.+++.+.| .+|.|.+. ..+...||||||||+|++| +|++|.|+||+.+.....++|.. .+...+
T Consensus 81 iGMt~~~~~~~l~~ia~S~~~~~~~~~~~~~~~~~IGqFGIGfyS~Fm-vad~v~V~trs~~~~~~~~~~~~--~~~~~~ 157 (213)
T d2iwxa1 81 IGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFL-VADRVQVISKSNDDEQYIWESNA--GGSFTV 157 (213)
T ss_dssp SCCCHHHHHHHHTTCCCSTHHHHHHHHHHTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTSCCEEEEECS--SSEEEE
T ss_pred ccccHHHHHHHHhhhhcccchHHHhhhhhhhhhhhhcccccchhhhhh-hccceeEEeecCCcccceeeEec--CCCcEE
Confidence 999999999876 47777542 1346799999999999998 99999999999886655554432 333333
Q ss_pred EEe-ccccCCCCcEEEEEecccc-chhhhhhhhh-hhhcCCCchhhHH
Q 004430 371 EIP-IVSYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 415 (754)
Q Consensus 371 ~VP-i~~~~~~Gt~I~l~l~~~~-e~~~~~~L~~-I~kySpF~s~pI~ 415 (754)
... ...-..+||.|+|+++++. ++..++.|+. |.+||.|..+||.
T Consensus 158 ~~~~~~~~~~~GT~I~L~lk~d~~efle~~rlk~iIkkYS~fI~~PI~ 205 (213)
T d2iwxa1 158 TLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQ 205 (213)
T ss_dssp EECSSSCCCSSEEEEEEEECTTCGGGGCHHHHHHHHHHHCCCCSSCEE
T ss_pred EEEeccCCCCCcEEEEEEeCccHHHhcCHHHHHHHHHHHhcCcCcCeE
Confidence 322 2223457999999999875 6778888854 9999999999996
No 3
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=99.89 E-value=6.3e-24 Score=215.20 Aligned_cols=168 Identities=20% Similarity=0.302 Sum_probs=125.3
Q ss_pred eecC-HHHHHHhhccccCCHHHHHHHHHhcccccC----------------CCccEEEEEecccccCCCCcCEEEEEeCC
Q 004430 237 VRAD-PSYLQTLGQAHSGWIFGAIAELVDNSRDAK----------------ATKLEISIESIYFKKAGKDIPMLSIIDDG 299 (754)
Q Consensus 237 ~~v~-p~fL~slst~hi~~pf~AIaELIDNA~DAg----------------At~V~I~I~~~~~~~~~~~~~~L~I~DNG 299 (754)
|+++ ...|+-++.++|+++..+|||||+||.||. ...+.|.+.. +.+...|+|.|||
T Consensus 5 Fq~e~~~ll~ll~~sLYs~~~iflRELiqNA~DA~~k~r~~~~~~~~~~~~~~~~~i~i~~------d~~~~~l~i~DnG 78 (227)
T d2gqpa1 5 FQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKC------DKEKNLLHVTDTG 78 (227)
T ss_dssp CCHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEE------ETTTTEEEEEECS
T ss_pred eehhHHHHHHHHHhcccCCCchhHHHHHhhHHHHHHHHHHHhccCcccccccchhhhhccc------CCCCcEEEEEecC
Confidence 4444 456677788889999999999999999993 1234455442 2357899999999
Q ss_pred CCCCHHhHHHhhh-cccCCCC-------------CCCCCcccccCceeeeecccccceEEEEEeeCCCCceeEEEEEecC
Q 004430 300 HGMTHQDVVRMTY-FGHKQPD-------------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQ 365 (754)
Q Consensus 300 ~GMt~eeL~~~l~-fG~S~k~-------------~~~~~~IGqfGvGfKsAsmrLg~~v~V~SK~~g~~sv~~ls~sf~~ 365 (754)
+||+++++.+.++ +|.|... ..+...|||||+||+|+|| ++++|.|.||+.+.. ++.|.+ .
T Consensus 79 iGMt~~e~~~~lgtIa~Sgt~~f~~~~~~~~~~~~~~~~~IGqFGvGfyS~Fm-Vad~V~v~s~~~~~~--~~~W~s--~ 153 (227)
T d2gqpa1 79 VGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFL-VADKVIVTSKHNNDT--QHIWES--D 153 (227)
T ss_dssp CCCCHHHHHHHHHCC---------------------CHHHHHHTTCGGGGGGG-TEEEEEEEEECTTSC--CEEEEE--S
T ss_pred ccccHHHHHHHHHHHhhcchHHHHHhhhhcccccccchhhhhhcCcceeEEEe-eeeeEEEEEeccCCc--ccEEEe--c
Confidence 9999999999874 5555321 0123579999999999999 999999999988753 456766 4
Q ss_pred CCeeEEEecc--ccCCCCcEEEEEecccc-chhhhhhhhh-hhhcCCCchhhHH
Q 004430 366 GKDNLEIPIV--SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 415 (754)
Q Consensus 366 g~~~i~VPi~--~~~~~Gt~I~l~l~~~~-e~~~~~~L~~-I~kySpF~s~pI~ 415 (754)
+...+.+... ....+||.|+|+++++. ++..++.++. |.+||.|..+||.
T Consensus 154 g~~~~~i~~~~~~~~~rGT~I~L~Lk~d~~efl~~~rl~~iIkkYs~fI~~PI~ 207 (227)
T d2gqpa1 154 SNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIY 207 (227)
T ss_dssp SSCEEEEECTTCSCSSSEEEEEEEECGGGGGGGCHHHHHHHHHHHHTTCSSCEE
T ss_pred CCCceecccccccccccceEEEEEecccchhhcCHHHHHHHHHHHhcCCCCCeE
Confidence 5556666443 33457999999999875 6788888865 9999999999986
No 4
>d1b63a2 d.122.1.2 (A:-2-216) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
Probab=99.44 E-value=9.2e-14 Score=139.06 Aligned_cols=141 Identities=21% Similarity=0.255 Sum_probs=95.1
Q ss_pred ceeeecCHHHHHHh-hccccCCHHHHHHHHHhcccccCCCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhh
Q 004430 234 KNFVRADPSYLQTL-GQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY 312 (754)
Q Consensus 234 ~~~~~v~p~fL~sl-st~hi~~pf~AIaELIDNA~DAgAt~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~ 312 (754)
|.+..+++...+.+ |...+.+|..|++|||+||+||+|++|+|.+.. .+...|.|.|||.||+++|+..+..
T Consensus 3 m~I~~L~~~~~~~i~ag~vi~~~~~~vkELveNsiDA~At~I~V~i~~-------~g~~~i~V~DnG~Gi~~~d~~~~~~ 75 (218)
T d1b63a2 3 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIER-------GGAKLIRIRDNGCGIKKDELALALA 75 (218)
T ss_dssp SCCCCCCHHHHHHHHHHHHCSSHHHHHHHHHHHHHHTTCSEEEEEEEG-------GGTSEEEEEECSCCCCGGGHHHHHS
T ss_pred CcceECCHHHHHHhCCcCEEecHHHHHHHHHhhhhcCCCCEEEEEEEc-------CCccEEEEeeCCCCcCHHHHHhhHh
Confidence 55788999999999 556778999999999999999999999999973 3567899999999999999988754
Q ss_pred -cccCCCCC-CCCCcccccCceeeee---cccccceEEEEEeeCCCCceeEEEEEecCCCeeE-EEeccccCCCCcEEEE
Q 004430 313 -FGHKQPDA-DDPNRIGRFGVGFKTG---AMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNL-EIPIVSYYRKGQFMEL 386 (754)
Q Consensus 313 -fG~S~k~~-~~~~~IGqfGvGfKsA---smrLg~~v~V~SK~~g~~sv~~ls~sf~~g~~~i-~VPi~~~~~~Gt~I~l 386 (754)
+.+|.-.. ++...+.. .||+.- ++.--.++.|.||+.+.. .++.- .+..+.... .-|. -...||+|++
T Consensus 76 r~~TSKi~~~~dl~~~~t--~GFRGEAL~Si~~vs~l~I~s~~~~~~-~~~~~-~~~~~~~~~~~~~~--~~~~GTtV~V 149 (218)
T d1b63a2 76 RHATSKIASLDDLEAIIS--LGFRGEALASISSVSRLTLTSRTAEQQ-EAWQA-YAEGRDMNVTVKPA--AHPVGTTLEV 149 (218)
T ss_dssp TTCCSSCCSHHHHHTCCS--SCCSSCHHHHHHTTSEEEEEEECTTCS-SEEEE-EEETTTTEEEEEEE--CCCSEEEEEE
T ss_pred ccccccccchhhcchhhh--hccchhHHHHhhhcCceEEeeecCCCC-ceEEE-EEEeccccceeeec--ccCCccEEEE
Confidence 44443211 12222333 355532 334457899999998863 33222 222222222 1222 1346998876
Q ss_pred E
Q 004430 387 D 387 (754)
Q Consensus 387 ~ 387 (754)
.
T Consensus 150 ~ 150 (218)
T d1b63a2 150 L 150 (218)
T ss_dssp E
T ss_pred E
Confidence 4
No 5
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.6e-13 Score=135.66 Aligned_cols=93 Identities=22% Similarity=0.311 Sum_probs=64.6
Q ss_pred cCCHHHHHHHHHhcccccCCCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhh-cccCCCCC-CC---CCcc
Q 004430 252 SGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDA-DD---PNRI 326 (754)
Q Consensus 252 i~~pf~AIaELIDNA~DAgAt~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-fG~S~k~~-~~---~~~I 326 (754)
+.+|..||+|||+||+||+|++|.|.+.. .+...|.|.|||+||+.++|..++. +.+|.... .+ ....
T Consensus 4 i~~~~~~v~ELi~NsiDA~At~I~i~i~~-------~g~~~i~V~DnG~Gi~~~dl~~~~~~~~tsk~~~~~~~~~~~t~ 76 (203)
T d1h7sa2 4 VLSLSTAVKELVENSLDAGATNIDLKLKD-------YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETF 76 (203)
T ss_dssp ECCHHHHHHHHHHHHHHTTCSEEEEEEEG-------GGTSEEEEEECSCCCCGGGSGGGGC----------CCTTCSEEE
T ss_pred EecHHHHHHHHHHHHHcCCCCEEEEEEEc-------CCEEEEEEeeCCcccCHHHhhhhhhheeeccccccccccccccc
Confidence 46899999999999999999999999962 3457899999999999999987654 33332211 12 2233
Q ss_pred cccCceeeeecccccceEEEEEeeCCC
Q 004430 327 GRFGVGFKTGAMRLGKDALVLTQTADS 353 (754)
Q Consensus 327 GqfGvGfKsAsmrLg~~v~V~SK~~g~ 353 (754)
|.-|.++. ++....+++|.|++.+.
T Consensus 77 GfrGeaL~--si~~~s~~~i~s~~~~~ 101 (203)
T d1h7sa2 77 GFRGEALS--SLCALSDVTISTCHASA 101 (203)
T ss_dssp SSSSSHHH--HHHHHSEEEEEEECTTC
T ss_pred Cccchhhh--hhhhccceEEEeecCCC
Confidence 33344432 23445679999998876
No 6
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]}
Probab=99.06 E-value=3.5e-10 Score=112.08 Aligned_cols=98 Identities=22% Similarity=0.362 Sum_probs=71.4
Q ss_pred CHHHHHHHHHhcccccCCC-----ccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhh-cccCCCCCCCCCccc
Q 004430 254 WIFGAIAELVDNSRDAKAT-----KLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIG 327 (754)
Q Consensus 254 ~pf~AIaELIDNA~DAgAt-----~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-fG~S~k~~~~~~~IG 327 (754)
.+..+|+|||+||+||.++ .+.|.|.... ...+...|.|.|||+||+++++..++. |.++.+. ......|
T Consensus 22 ~L~~~l~eLi~Naida~~~~~~~~~i~i~i~~~~---~~~~~~~i~V~DnG~Gi~~~~~~~~f~~~~~s~~~-~~~~~~G 97 (219)
T d2hkja3 22 ALYQTVRELIENSLDATDVHGILPNIKITIDLID---DARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKY-VNRQTRG 97 (219)
T ss_dssp HHHHHHHHHHHHHHHTTGGGTCCCEEEEEEEEEE---TTTTEEEEEEEECSCCCCGGGHHHHHHCCCSSCCC-CCSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcceEEEEEEEec---CCCCEEEEEEEcCCCCCCHHHHHhhccceEecccc-ccccccC
Confidence 3678999999999999763 4555554321 123345799999999999999999885 6555442 3456789
Q ss_pred ccCceeeeecc----cccceEEEEEeeCCCCc
Q 004430 328 RFGVGFKTGAM----RLGKDALVLTQTADSRS 355 (754)
Q Consensus 328 qfGvGfKsAsm----rLg~~v~V~SK~~g~~s 355 (754)
.+|+|+.++.. ..|..+.|.|+..+...
T Consensus 98 ~~GlGl~~~~~~s~~~~g~~i~V~S~~~~~~~ 129 (219)
T d2hkja3 98 MYGLGVKAAVLYSQMHQDKPIEIETSPVNSKR 129 (219)
T ss_dssp SCTTTHHHHHHHHHHHCCCCEEEEEECTTCSE
T ss_pred ccCHHHHHHHHHHHHcCCcEEEEEEEecCCCc
Confidence 99999986543 34567999999887643
No 7
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]}
Probab=97.97 E-value=4.8e-06 Score=78.15 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=62.0
Q ss_pred HHHHHHHHHhcccccCCCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhh-cccCCCCCCCCCcccccCcee
Q 004430 255 IFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGRFGVGF 333 (754)
Q Consensus 255 pf~AIaELIDNA~DAgAt~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-fG~S~k~~~~~~~IGqfGvGf 333 (754)
+..+|..||+||+.+....|.|.+.. ..+.-.|+|.|||.||+++++.+++. |.+... ....+..|+|+
T Consensus 48 l~~vl~NLi~NAik~~~~~i~i~~~~------~~~~~~i~V~D~G~GI~~e~~~~iF~~F~r~~~----~~~~~g~GLGL 117 (161)
T d1bxda_ 48 IKRAVANMVVNAARYGNGWIKVSSGT------EPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDS----ARTISGTGLGL 117 (161)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEE------ETTEEEEEEEEESSCSCTTGGGCSSCCCCCCSC----CCCCCCCSCCC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEEE------eCCEEEEEEEEcCCCCCHHHHHHHhCCceECCC----CCcCCCCCchH
Confidence 34689999999999988888888764 23456799999999999999999886 433221 12245579998
Q ss_pred eeec---ccccceEEEEEeeC
Q 004430 334 KTGA---MRLGKDALVLTQTA 351 (754)
Q Consensus 334 KsAs---mrLg~~v~V~SK~~ 351 (754)
.-+- -..|.++.|.|...
T Consensus 118 ~ivk~iv~~hgG~i~v~s~~~ 138 (161)
T d1bxda_ 118 AIVQRIVDNHNGMLELGTSER 138 (161)
T ss_dssp CTTHHHHHHHTSEEEEEEETT
T ss_pred HHHHHHHHHCCCEEEEEEcCC
Confidence 5332 24567777777544
No 8
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.89 E-value=2e-05 Score=78.82 Aligned_cols=86 Identities=16% Similarity=0.273 Sum_probs=57.7
Q ss_pred HHHHHHHHHhccccc-----CCCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHH-------H-hhh-cccCCCC-
Q 004430 255 IFGAIAELVDNSRDA-----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVV-------R-MTY-FGHKQPD- 319 (754)
Q Consensus 255 pf~AIaELIDNA~DA-----gAt~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~-------~-~l~-fG~S~k~- 319 (754)
+...+-|+|+||+|. ..++|.|.|+. +...|+|.|||.||+-+.-. + +|+ +..+.+-
T Consensus 54 l~ki~dEil~Na~D~~~r~~~~~~I~v~i~~--------~~~si~V~d~GrGIPv~~h~~~~~~~~e~ift~l~ag~nfd 125 (239)
T d1pvga2 54 LFKIFDEILVNAADNKVRDPSMKRIDVNIHA--------EEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 125 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEEET--------TTTEEEEEEESSCCCCSBCTTTCSBHHHHHHHSSSEESCCC
T ss_pred ceeecceeeecccchhhhccccceEEEEEeC--------CCCEEEEEecCcceeeeeccccccchhheeeEeeccccccc
Confidence 456788999999995 34778888762 35789999999999765321 1 222 2222221
Q ss_pred -CCCCCcccccCceeeeecccccceEEEEEe
Q 004430 320 -ADDPNRIGRFGVGFKTGAMRLGKDALVLTQ 349 (754)
Q Consensus 320 -~~~~~~IGqfGvGfKsAsmrLg~~v~V~SK 349 (754)
.......|..|+|.+.+-. ++..++|.+.
T Consensus 126 ~~~~k~sgGlnGvG~~vvNa-lS~~f~vev~ 155 (239)
T d1pvga2 126 DDEKKVTGGRNGYGAKLCNI-FSTEFILETA 155 (239)
T ss_dssp TTSCCCCSCCSSCHHHHHHH-TEEEEEEEEE
T ss_pred cccceeeCCeeccceeehhh-hhHhhheeeE
Confidence 1225678999999965444 7888877664
No 9
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]}
Probab=97.70 E-value=7.9e-05 Score=72.97 Aligned_cols=121 Identities=16% Similarity=0.161 Sum_probs=75.6
Q ss_pred HHHHHHHHHhcccccC----CCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHH--------Hhhh-cccCCC--C
Q 004430 255 IFGAIAELVDNSRDAK----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVV--------RMTY-FGHKQP--D 319 (754)
Q Consensus 255 pf~AIaELIDNA~DAg----At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~--------~~l~-fG~S~k--~ 319 (754)
+...+-|+|+||+|.. ++.+.|.+. ....++|.|||.||+-+.-. -+|+ +..+.+ .
T Consensus 27 l~~l~~Eil~Na~De~~~~~~~~i~v~~~---------~dg~i~V~ddG~GIpv~~h~~~~~~~~e~if~~l~~~~~~d~ 97 (212)
T d1kija2 27 YHHLFKEILDNAVDEALAGYATEILVRLN---------EDGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQ 97 (212)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEEEEEEC---------TTSCEEEEECSSCCCCSEETTTTEEHHHHHHHSSCEESGGGG
T ss_pred hhhhhhhhhhhhhhhhhhcCCceEEEEEc---------CCCcEEEEECCcccccccccccCcceEEEEEEEEcccccccC
Confidence 5678999999999983 566666654 13579999999999875311 1111 111111 1
Q ss_pred CCCCCcccccCceeeeecccccceEEEEEeeCCCCceeEEEEEecCCCe--eEEEec-cccCCCCcEEEEEec
Q 004430 320 ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKD--NLEIPI-VSYYRKGQFMELDTV 389 (754)
Q Consensus 320 ~~~~~~IGqfGvGfKsAsmrLg~~v~V~SK~~g~~sv~~ls~sf~~g~~--~i~VPi-~~~~~~Gt~I~l~l~ 389 (754)
.......|..|+|.+.+ -.++..+.|.+++++. .+.++|..|.. ....+. ..-...||+|+..+.
T Consensus 98 ~~~~~sgG~hGvGa~vv-NalS~~~~v~v~r~~k----~~~~~f~~g~~~~~~~~~~~~~~~~~GT~ItF~PD 165 (212)
T d1kija2 98 GAYKVSGGLHGVGASVV-NALSEWTVVEVFREGK----HHRIAFSRGEVTEPLRVVGEAPRGKTGTRVTFKPD 165 (212)
T ss_dssp SSCCCCSCSSTTSHHHH-HHTEEEEEEEEEETTE----EEEEEEETTEEEEEEEEEEECGGGCCEEEEEEEEC
T ss_pred CCceecCCCccccceEE-EEeccceEEEEEEecc----eeeeEEeccccCCcceEccccCCCCccEEEEEEEc
Confidence 22357789999999544 4488999999988774 34456644432 222221 222345888876553
No 10
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.69 E-value=2.9e-05 Score=71.61 Aligned_cols=86 Identities=19% Similarity=0.171 Sum_probs=53.7
Q ss_pred HHHHHHHHHhcccccC-CCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhh-cccCCCCCCCCCcccccCce
Q 004430 255 IFGAIAELVDNSRDAK-ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGRFGVG 332 (754)
Q Consensus 255 pf~AIaELIDNA~DAg-At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-fG~S~k~~~~~~~IGqfGvG 332 (754)
+..+|..||+||+.+. +..|.|.+.. ..+.-.|.|.|||.||+++++.+++. |-..... ..+-.|+|
T Consensus 45 l~~vl~NLl~NAiky~~~~~I~i~~~~------~~~~~~i~V~D~G~Gi~~~~~~~ife~f~r~~~~-----~~~G~GLG 113 (148)
T d1ysra1 45 LRLAVDNAIANAVKHGGATLVQLSAVS------SRAGVEIAIDDNGSGVPEGERQVVFERFSRGSTA-----SHSGSGLG 113 (148)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEEE------ETTEEEEEEEESSSCCCGGGHHHHHTSCC----------------CC
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEEEe------cCCEEEEEEEEcCCCCCHHHHHHhcCccccCCCC-----CCCCccHH
Confidence 4578999999999975 4456666553 23456899999999999999999886 4222111 12335888
Q ss_pred eeee---cccccceEEEEEeeC
Q 004430 333 FKTG---AMRLGKDALVLTQTA 351 (754)
Q Consensus 333 fKsA---smrLg~~v~V~SK~~ 351 (754)
+.-+ .-..|.++.+.|...
T Consensus 114 L~i~~~iv~~hgG~i~~~s~~~ 135 (148)
T d1ysra1 114 LALVAQQAQLHGGTASLENSPL 135 (148)
T ss_dssp CHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHcCCEEEEEEcCC
Confidence 7532 124566777766543
No 11
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]}
Probab=97.67 E-value=3.2e-05 Score=71.19 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=58.8
Q ss_pred HHHHHHHHHhcccccCCCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhhcccCCCCCCCCCcccccCceee
Q 004430 255 IFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFK 334 (754)
Q Consensus 255 pf~AIaELIDNA~DAgAt~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~fG~S~k~~~~~~~IGqfGvGfK 334 (754)
+..+|..||+||+.+....|.|.+.. ..+.-.|.|.|||.||+.+++.+++.-.+..... . +-.|+|+.
T Consensus 45 l~~vl~NLl~NAik~~~~~i~i~~~~------~~~~~~i~V~D~G~Gi~~~~~~~iF~~F~r~~~~--~---~G~GLGL~ 113 (146)
T d1id0a_ 45 FVEVMGNVLDNACKYCLEFVEISARQ------TDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTL--R---PGQGVGLA 113 (146)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEEEE------CSSCEEEEEEESSSCCCGGGTTGGGSCCCCTTCC--C---TTCCSCHH
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEEEe------eCCEEEEEEEeeCCCCCHHHHHHHcCCcccCCCC--C---CCeeHHHH
Confidence 45789999999999998888888774 3455679999999999999999988633322111 1 23688874
Q ss_pred eec---ccccceEEEEEe
Q 004430 335 TGA---MRLGKDALVLTQ 349 (754)
Q Consensus 335 sAs---mrLg~~v~V~SK 349 (754)
-+- =+.|.++.|.|.
T Consensus 114 I~k~iv~~h~G~i~~~s~ 131 (146)
T d1id0a_ 114 VAREITEQYEGKIVAGES 131 (146)
T ss_dssp HHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHcCCEEEEEEc
Confidence 221 134566666554
No 12
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Probab=97.62 E-value=3.7e-05 Score=73.73 Aligned_cols=90 Identities=16% Similarity=0.302 Sum_probs=59.8
Q ss_pred HHHHHHHHHhcccccC---------CCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhhcccCCCCCC----
Q 004430 255 IFGAIAELVDNSRDAK---------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDAD---- 321 (754)
Q Consensus 255 pf~AIaELIDNA~DAg---------At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~fG~S~k~~~---- 321 (754)
+..+|..|++||++|. .+.|.|.+.. ..+.-.|.|.|||.||+++++.++|...++.+...
T Consensus 61 l~qvl~NLl~NA~~~~~~~~~~~~~~~~I~v~~~~------~~~~~~i~V~D~G~GI~~~~~~~iF~~f~~~~~~~~~~~ 134 (190)
T d1jm6a2 61 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVAL------GEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGT 134 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCTTSCCCEEEEEEE------CSSEEEEEEEECSCCCCGGGTTGGGCTTCCCSCCC----
T ss_pred HHHHHHHHHHHHHHHhhccCccccccceEEEEEEe------CCeEEEEEEeccCCCCCHHHHHHHhCcceecCCcCcCcc
Confidence 4578999999999872 2347777664 34567899999999999999999997544433211
Q ss_pred CCCcccccCceeeeecc---cccceEEEEEee
Q 004430 322 DPNRIGRFGVGFKTGAM---RLGKDALVLTQT 350 (754)
Q Consensus 322 ~~~~IGqfGvGfKsAsm---rLg~~v~V~SK~ 350 (754)
.....+-.|+|+..+-- ..|.++.|.|..
T Consensus 135 ~~~~~~G~GLGL~i~k~ive~hgG~I~v~s~~ 166 (190)
T d1jm6a2 135 GGTPLAGFGYGLPISRLYAKYFQGDLQLFSME 166 (190)
T ss_dssp -----CCSSCHHHHHHHHHHHTTCEEEEEEET
T ss_pred cccccCCCCccHHHHHHHHHHCCCEEEEEecC
Confidence 12234567888854321 356777776653
No 13
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}
Probab=97.60 E-value=3.5e-05 Score=71.82 Aligned_cols=89 Identities=13% Similarity=0.187 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcccccCC---C--ccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhh-cccCCCCCCCCCcccc
Q 004430 255 IFGAIAELVDNSRDAKA---T--KLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGR 328 (754)
Q Consensus 255 pf~AIaELIDNA~DAgA---t--~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-fG~S~k~~~~~~~IGq 328 (754)
+..+|..||+||+.+.. . .|.|.+.. ..+.-.|+|.|||.||+++++.+++. |-..... .....+-
T Consensus 50 l~qvl~NLi~NAik~t~~~~~~~~i~i~~~~------~~~~~~i~V~D~G~GI~~~~~~~iF~~F~~~~~~--~~~~~~G 121 (161)
T d2c2aa2 50 IRQVLLNLLNNGVKYSKKDAPDKYVKVILDE------KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSS--LTYEVPG 121 (161)
T ss_dssp HHHHHHHHHHHHHHTCCTTCTTCEEEEEEEE------ETTEEEEEEEECSSCCCGGGTTGGGSTTCCCC-----------
T ss_pred HHHHHHHHHHHHHHhhhcCCCcceeeEEEEe------cCCEEEEEEEEcCCCCCHHHHHHhhCCcEEcCCC--CCCCCCc
Confidence 44689999999998853 2 35555543 23456899999999999999999986 4332211 1122334
Q ss_pred cCceeeee---cccccceEEEEEeeC
Q 004430 329 FGVGFKTG---AMRLGKDALVLTQTA 351 (754)
Q Consensus 329 fGvGfKsA---smrLg~~v~V~SK~~ 351 (754)
.|+|+.-+ .-..|.++.|.|...
T Consensus 122 ~GLGL~i~k~iv~~hgG~i~v~s~~~ 147 (161)
T d2c2aa2 122 TGLGLAITKEIVELHGGRIWVESEVG 147 (161)
T ss_dssp CCCTHHHHHHHHHHTTCEEEEEEETT
T ss_pred ccHHHHHHHHHHHHCCCEEEEEecCC
Confidence 58887432 224577777777543
No 14
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.59 E-value=2e-05 Score=75.02 Aligned_cols=58 Identities=22% Similarity=0.343 Sum_probs=44.7
Q ss_pred HHHHHHHHHhcccccC----------CCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhhcccCCC
Q 004430 255 IFGAIAELVDNSRDAK----------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQP 318 (754)
Q Consensus 255 pf~AIaELIDNA~DAg----------At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~fG~S~k 318 (754)
+..+|..||+||++|. ...|.|.+.. ..+.-.|.|.|||.||+++++.++|...++.+
T Consensus 54 l~qvl~NLl~NAi~~t~~~~~~~~~~~~~I~i~~~~------~~~~v~i~V~D~G~GI~~e~~~~iF~~f~tt~ 121 (193)
T d1gkza2 54 LDYILPELLKNAMRATMESHLDTPYNVPDVVITIAN------NDVDLIIRISDRGGGIAHKDLDRVMDYHFTTA 121 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCTTSCCCEEEEEEE------CSSEEEEEEECCSCCCCTTTTTTTTSTTCCCC
T ss_pred HHHHHHHHHHHHHHhcccCceeeccccceEEEEEEc------cCCEEEEEEecCCCCCCHHHHHHhcCCceecc
Confidence 4578999999999982 2356666653 34567899999999999999999987655544
No 15
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]}
Probab=97.56 E-value=0.00011 Score=72.52 Aligned_cols=122 Identities=17% Similarity=0.196 Sum_probs=76.6
Q ss_pred CHHHHHHHHHhcccccC----CCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHh--------HHHhhh-cccCCC--
Q 004430 254 WIFGAIAELVDNSRDAK----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQD--------VVRMTY-FGHKQP-- 318 (754)
Q Consensus 254 ~pf~AIaELIDNA~DAg----At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~ee--------L~~~l~-fG~S~k-- 318 (754)
-+...+-|+|+||+|.. ++.+.|.+.. ...|+|.|||.||+-+. +.-+|+ +..+.+
T Consensus 34 gl~~l~~Eil~Na~De~~~~~~~~i~v~i~~---------dgsIsV~ddGrGIPv~~h~~~~~~~~e~if~~l~tg~~fd 104 (219)
T d1ei1a2 34 GLHHMVFEVVDNAIDEALAGHCKEIIVTIHA---------DNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFD 104 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEEECT---------TSCEEEEECSSCCCCSBCTTTSSBHHHHHHHSTTEESCSS
T ss_pred cchhhhHhHhhhhhhhhcCCCccceeEEEcC---------CCeEEEEECCccccccccCccCCchhhhhhhhhhhccCCC
Confidence 46688999999999982 4666666541 35799999999999663 222332 222222
Q ss_pred CCCCCCcccccCceeeeecccccceEEEEEeeCCCCceeEEEEEecCCCeeEEEe-ccccCCCCcEEEEEec
Q 004430 319 DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIP-IVSYYRKGQFMELDTV 389 (754)
Q Consensus 319 ~~~~~~~IGqfGvGfKsAsmrLg~~v~V~SK~~g~~sv~~ls~sf~~g~~~i~VP-i~~~~~~Gt~I~l~l~ 389 (754)
..+.+-..|..|+|.+.+- .+++.+.|.+++++. .+.++|..|.-.-.+. +..-...||+|...+.
T Consensus 105 ~~~~~~sgG~nGvG~~~~N-alS~~f~v~~~r~g~----~y~q~f~~g~~~~~~~~~~~~~~~gT~I~F~PD 171 (219)
T d1ei1a2 105 DNSYKVSGGLHGVGVSVVN-ALSQKLELVIQREGK----IHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPS 171 (219)
T ss_dssp SSSCSSCSCCSSCHHHHHH-HTEEEEEEEEEETTE----EEEEEEETTEESSCCEEEEECSCCEEEEEEEEC
T ss_pred CCcceeEcCccccceeEEE-EeeeEEEEEEEECCE----EEEEEEeCCeECCCceeccCcCCCCEEEEEEEC
Confidence 1223567799999996544 489999999988774 3456664442111011 1123356888876653
No 16
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.33 E-value=0.00011 Score=63.65 Aligned_cols=50 Identities=26% Similarity=0.326 Sum_probs=37.8
Q ss_pred HHHHHHHHhcccccC----------CCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhh
Q 004430 256 FGAIAELVDNSRDAK----------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMT 311 (754)
Q Consensus 256 f~AIaELIDNA~DAg----------At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l 311 (754)
..++..||+||++|. ...|.|.+.. ..+.-.|.|.|||.||+++++.+.|
T Consensus 66 ~qvl~NLl~NAi~~~~~~~~~~~~~~~~I~i~~~~------~~~~v~i~V~D~G~GI~~e~~~~IF 125 (125)
T d1y8oa2 66 FHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTL------GKEDLSIKISDLGGGVPLRKIDRLF 125 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSCCCCEEEEEEE------CSSEEEEEEEECSCCCCHHHHGGGG
T ss_pred HHHHHHHHHHHHHhhhccccccCCCceeEEEEeec------CCCEEEEEEEEeCCCcCHHHHcccC
Confidence 357888999998872 2456666653 3456789999999999999988764
No 17
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]}
Probab=97.19 E-value=0.00038 Score=66.00 Aligned_cols=143 Identities=17% Similarity=0.146 Sum_probs=82.7
Q ss_pred HHHHHHHHHhccccc----CCCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhhcccCCCCCCCCCcccccC
Q 004430 255 IFGAIAELVDNSRDA----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFG 330 (754)
Q Consensus 255 pf~AIaELIDNA~DA----gAt~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~fG~S~k~~~~~~~IGqfG 330 (754)
+--.|.|+||||+|. .++.|.|.+.. ...++|.|||.||+-+- ..+ .|..+
T Consensus 6 lhHlv~EivDNsiDEa~aG~~~~I~V~l~~---------D~si~V~D~GRGIPvd~---------h~~-------~~~~~ 60 (168)
T d1s14a_ 6 PNHLGQEVIDNSVDEALAGHAKRVDVILHA---------DQSLEVIDDGRGMPVDI---------HPE-------EGVPA 60 (168)
T ss_dssp THHHHHHHHHHHHHHHHTTSCSEEEEEECT---------TSCEEEEECSSCCCCSB---------CTT-------TCSBH
T ss_pred CceEEeeeeecHHHHHHcCCCCEEEEEEeC---------CCeEEEEEEecccceee---------ecc-------CCCch
Confidence 345799999999997 37889888862 35799999999998532 000 01111
Q ss_pred c--eee-eecccccceEEEEEeeCCCCceeEEEEEecCCCeeEE---EeccccCCCCcEEEEEeccccchhhhhhhhhhh
Q 004430 331 V--GFK-TGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLE---IPIVSYYRKGQFMELDTVVQSEATAKYNLKSIK 404 (754)
Q Consensus 331 v--GfK-sAsmrLg~~v~V~SK~~g~~sv~~ls~sf~~g~~~i~---VPi~~~~~~Gt~I~l~l~~~~e~~~~~~L~~I~ 404 (754)
+ .|- |+.=.|+..+.|.++++|. .+.+.|..|.-.-. +....-...||.|...+.++ |.
T Consensus 61 ~e~v~t~SVVNALS~~l~v~v~RdGk----~~~q~f~~G~~~~~l~~~~~~~~~~tGT~I~F~PD~~-----------IF 125 (168)
T d1s14a_ 61 VELILCISVVNALSKRVEVNVRRDGQ----VYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDET-----------FF 125 (168)
T ss_dssp HHHHHHTSHHHHHEEEEEEEEEETTE----EEEEEEETTEEEEEEEEEEECCTTCCEEEEEEEECGG-----------GS
T ss_pred hhccCceeEeeeccCeEEEEEEECCE----EEEEEECCCccCCcccceeecccCCCcEEEEEeeccc-----------ee
Confidence 1 111 2333688999999999885 45677766642211 22222234699887665422 11
Q ss_pred hcCCCchhhHHHhhhccccCCCCcEEEEEeccC
Q 004430 405 EFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQ 437 (754)
Q Consensus 405 kySpF~s~pI~e~~~~~~~~~~GT~IiI~NLrr 437 (754)
+-.-|...-|...+.+.+-=..|.+|.+.+-+.
T Consensus 126 ~~~~f~~~~l~~rlre~AfLn~GL~I~l~Der~ 158 (168)
T d1s14a_ 126 DSPRFSVSRLTHVLKAKAVLCPGVEITFKDEIN 158 (168)
T ss_dssp SCCSCCHHHHHHHHHHHHHHSTTCEEEEEETTT
T ss_pred ccccccHHHHHHHHHHHhhcCCCCEEEEEEcCC
Confidence 112233322333332222125799999887643
No 18
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.65 E-value=0.00098 Score=60.26 Aligned_cols=83 Identities=18% Similarity=0.235 Sum_probs=50.8
Q ss_pred HHHHHHHHHhcccccC-----CCccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhhcccCCCCCCCCCccccc
Q 004430 255 IFGAIAELVDNSRDAK-----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRF 329 (754)
Q Consensus 255 pf~AIaELIDNA~DAg-----At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~fG~S~k~~~~~~~IGqf 329 (754)
...|+.||+.||+.++ ...|.|.+.. ..+.-.|.|.|||.||+. +...+.-..+.+. ..+.-
T Consensus 40 i~~av~E~v~Nai~ha~~~~~~~~I~i~~~~------~~~~l~i~i~D~G~gi~~--~~~~~~~~~~~~~-----~~~~~ 106 (139)
T d1th8a_ 40 IKTVVSEAVTNAIIHGYNNDPNGIVSISVII------EDGVVHLTVRDEGVGIPD--IEEARQPLFTTKP-----ELERS 106 (139)
T ss_dssp HHHHHHHHHHHHHHTTSTTCTTSEEEEEEEE------ETTEEEEEEEECSSCCSC--HHHHTCCC------------CCC
T ss_pred HHHHHHHhhhhhhheecCCCCCcEEEEEEEE------ecCEEEEEEccccccccc--ccccccccceecc-----cCCCc
Confidence 4579999999999874 2356666654 345678999999999974 3344331111111 11223
Q ss_pred CceeeeecccccceEEEEEeeC
Q 004430 330 GVGFKTGAMRLGKDALVLTQTA 351 (754)
Q Consensus 330 GvGfKsAsmrLg~~v~V~SK~~ 351 (754)
|+|+.- .-++++++.|.|...
T Consensus 107 GlGL~i-v~~l~d~i~i~s~~~ 127 (139)
T d1th8a_ 107 GMGFTI-MENFMDEVIVESEVN 127 (139)
T ss_dssp SCHHHH-HHHHSSEEEEEEETT
T ss_pred hHHHHH-HHHhCCEEEEEEcCC
Confidence 888742 235677887777543
No 19
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]}
Probab=96.47 E-value=0.00067 Score=60.55 Aligned_cols=58 Identities=12% Similarity=0.041 Sum_probs=37.8
Q ss_pred HHHHHHHHHhcccccCC----CccEEEEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhhcccC
Q 004430 255 IFGAIAELVDNSRDAKA----TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHK 316 (754)
Q Consensus 255 pf~AIaELIDNA~DAgA----t~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~fG~S 316 (754)
...++..||+||++|.. ....|.+... ...+.-.|.|.|||.||+++.+.+++.-|+.
T Consensus 98 l~qvl~Nll~NAi~~~~~~~~~~~~I~i~~~----~~~~~~~i~v~D~G~gi~~e~l~~if~~~y~ 159 (179)
T d1ixma_ 98 LAKLMRKLFHLFDQAVSRESENHLTVSLQTD----HPDRQLILYLDFHGAFADPSAFDDIRQNGYE 159 (179)
T ss_dssp HHHHHHHHHHHHHHHBCTTSCCEEEEEEECC----CSSSSCEEEEEEESCBSCGGGCC--------
T ss_pred hHHHHHHHHHHHHHHhhhccccchhhhhhhc----ccccEEEEEEEeCCCCcCHHHHHHHHHhccc
Confidence 45788999999999843 3344555431 1456789999999999999999999875553
No 20
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.43 E-value=0.0002 Score=66.02 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=39.5
Q ss_pred HHHHHHHHHhcccccCCCc---cEE------EEEecccccCCCCcCEEEEEeCCCCCCHHhHHHhhhcccCCCCCCCCCc
Q 004430 255 IFGAIAELVDNSRDAKATK---LEI------SIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNR 325 (754)
Q Consensus 255 pf~AIaELIDNA~DAgAt~---V~I------~I~~~~~~~~~~~~~~L~I~DNG~GMt~eeL~~~l~fG~S~k~~~~~~~ 325 (754)
+..+|..||+||++|.... +.+ .+... .......-.|.|.|||.||+++++.+++.-.++.+.
T Consensus 45 l~qvl~NLl~NA~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~G~Gi~~~~~~~iF~pf~s~k~------ 116 (156)
T d1r62a_ 45 IEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLH--GERYRLAARIDVEDNGPGIPPHLQDTLFYPMVSGRE------ 116 (156)
T ss_dssp HHHHHHHHHHHHHHHHGGGCEEEEEEEEEEEEEEET--TEEEEEEEEEEEEEECTTC-----------------------
T ss_pred HHHHHHHHHHHHHHhhhcCCCceeeeccccceeeec--cccCCceEEEEEecCCCCCCHHHHHhhcccceecCC------
Confidence 4468999999999985321 111 11100 000112346899999999999999999874444332
Q ss_pred ccccCceeeeec---ccccceEEEEEee
Q 004430 326 IGRFGVGFKTGA---MRLGKDALVLTQT 350 (754)
Q Consensus 326 IGqfGvGfKsAs---mrLg~~v~V~SK~ 350 (754)
+-.|+|+..+- =..|..+.|.|..
T Consensus 117 -~G~GLGL~i~~~iv~~hgG~i~v~s~~ 143 (156)
T d1r62a_ 117 -GGTGLGLSIARNLIDQHSGKIEFTSWP 143 (156)
T ss_dssp ----CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred -CCCCchHHHHHHHHHHCCCEEEEEEeC
Confidence 23478875321 1456777776654
No 21
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=87.92 E-value=0.1 Score=40.73 Aligned_cols=36 Identities=19% Similarity=0.504 Sum_probs=24.3
Q ss_pred CCCCCceeeCccchhhccCC-CCCCC--CCCCCCceecC
Q 004430 640 YKPDQEWVQCNKCRKWRMLD-PGFDT--KSLPVEWFCYM 675 (754)
Q Consensus 640 ~~~~~~WVQCd~C~KWR~Lp-~~~~~--~~lp~~W~C~m 675 (754)
+..+..|||||.|.+|-+.- .++.. ....+.|+|..
T Consensus 16 ~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~ 54 (64)
T d1we9a_ 16 YAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPS 54 (64)
T ss_dssp CCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHH
T ss_pred CCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcC
Confidence 33456899999999998765 22322 23457899963
No 22
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=85.48 E-value=0.26 Score=39.15 Aligned_cols=33 Identities=21% Similarity=0.796 Sum_probs=24.2
Q ss_pred CCCceeeCccchhhccCC-CCCC-CCCCCCCceec
Q 004430 642 PDQEWVQCNKCRKWRMLD-PGFD-TKSLPVEWFCY 674 (754)
Q Consensus 642 ~~~~WVQCd~C~KWR~Lp-~~~~-~~~lp~~W~C~ 674 (754)
....|||||.|.+|-++. .++. ....++.|+|.
T Consensus 27 ~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~ 61 (72)
T d1weea_ 27 DGERMLACDGCGVWHHTRCIGINNADALPSKFLCF 61 (72)
T ss_dssp CSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCH
T ss_pred CCCeEEEeCCCCCcCchhhcCCccccCCCCcEECc
Confidence 345799999999999986 2332 23556899995
No 23
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.31 E-value=0.071 Score=43.57 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=23.6
Q ss_pred CCCCceeeCccchhhccCC-CCCCC--CCCCCCceecC
Q 004430 641 KPDQEWVQCNKCRKWRMLD-PGFDT--KSLPVEWFCYM 675 (754)
Q Consensus 641 ~~~~~WVQCd~C~KWR~Lp-~~~~~--~~lp~~W~C~m 675 (754)
.++..|||||.|..|-+.. .++.. ...+++|+|..
T Consensus 22 ~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~ 59 (79)
T d1wepa_ 22 NVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPD 59 (79)
T ss_dssp CSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTT
T ss_pred CCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECcc
Confidence 3466899999999998765 12221 23446799964
No 24
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.82 E-value=0.94 Score=35.83 Aligned_cols=32 Identities=19% Similarity=0.569 Sum_probs=21.0
Q ss_pred CCceeeCccchhhccCCC-CCCC------CCCCCCceec
Q 004430 643 DQEWVQCNKCRKWRMLDP-GFDT------KSLPVEWFCY 674 (754)
Q Consensus 643 ~~~WVQCd~C~KWR~Lp~-~~~~------~~lp~~W~C~ 674 (754)
+..|||||.|.+|=++.= ++.. ...++.|+|.
T Consensus 27 ~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~ 65 (76)
T d1wema_ 27 NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICP 65 (76)
T ss_dssp SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCH
T ss_pred CCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECC
Confidence 347999999999976541 2211 1235679985
No 25
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.53 E-value=3 Score=31.71 Aligned_cols=33 Identities=18% Similarity=0.394 Sum_probs=22.1
Q ss_pred CCceeeCccchhhccCCC-CCCCCCC-CCCceecC
Q 004430 643 DQEWVQCNKCRKWRMLDP-GFDTKSL-PVEWFCYM 675 (754)
Q Consensus 643 ~~~WVQCd~C~KWR~Lp~-~~~~~~l-p~~W~C~m 675 (754)
...+|+||.|.+|=.+.= ....... .+.|+|..
T Consensus 18 ~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~ 52 (61)
T d1mm2a_ 18 GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPR 52 (61)
T ss_dssp CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTT
T ss_pred CCeEEEeCCCCccCchhhcCCCcCcCCCCcEECCC
Confidence 447999999999987652 1111222 36899975
No 26
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.35 E-value=4.7 Score=29.25 Aligned_cols=29 Identities=31% Similarity=0.714 Sum_probs=19.4
Q ss_pred CceeeCccchhhccCC---CCCCCCCCC-CCceec
Q 004430 644 QEWVQCNKCRKWRMLD---PGFDTKSLP-VEWFCY 674 (754)
Q Consensus 644 ~~WVQCd~C~KWR~Lp---~~~~~~~lp-~~W~C~ 674 (754)
..+|+||.|.+|=.+. ..+ ...| +.|+|.
T Consensus 13 ~~~i~Cd~C~~~~H~~C~~p~~--~~~p~~~W~C~ 45 (51)
T d1f62a_ 13 DKLILCDECNKAFHLFCLRPAL--YEVPDGEWQCP 45 (51)
T ss_dssp SCCEECTTTCCEECHHHHCTTC--CSCCSSCCSCT
T ss_pred CCEEEcCCCCCCCCCCCCCCCC--CcCCCCCEECc
Confidence 4789999999997652 111 1223 489996
No 27
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.58 E-value=11 Score=30.22 Aligned_cols=33 Identities=21% Similarity=0.548 Sum_probs=21.4
Q ss_pred CCceeeCccchhhccCCC---CCC--CCCCCC-CceecC
Q 004430 643 DQEWVQCNKCRKWRMLDP---GFD--TKSLPV-EWFCYM 675 (754)
Q Consensus 643 ~~~WVQCd~C~KWR~Lp~---~~~--~~~lp~-~W~C~m 675 (754)
...+|+||.|..|=++.= .+. ....|+ .|||..
T Consensus 30 ~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~ 68 (88)
T d1weva_ 30 GNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCAR 68 (88)
T ss_dssp TCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHH
T ss_pred CCeEEEcCCCCCccccccCCCcccccccccCCCeEECcc
Confidence 347999999999986652 111 112333 899975
No 28
>d1ow1a_ b.131.1.3 (A:) SMART/HDAC1 associated repressor protein, SHARP {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.98 E-value=15 Score=33.76 Aligned_cols=48 Identities=29% Similarity=0.615 Sum_probs=35.0
Q ss_pred CCCccccccCCCCCchhhhHH--------HHHHHhhcCCeEEEEEece-------eEEEEeCCC
Q 004430 68 GMSHCFLSPAPECSRDHNEWR--------RFLIYLQGRDMVAIAKFKF-------WEFYILPPD 116 (754)
Q Consensus 68 ~~~~~~~~p~~~~~~~~~ew~--------~f~~~l~~~~~~~~~~~~~-------~~~~~~~~~ 116 (754)
-..||+|--.| +.++..++. -|.+||+.-+-.|||.+.. .-+|||||-
T Consensus 76 ~~~~c~lLAlp-~~~~~~d~~~q~~~l~~~lV~YLkqKqAAGVI~l~~~~~~~~~~VLh~FPPC 138 (170)
T d1ow1a_ 76 ETDYCLLLALP-CGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPC 138 (170)
T ss_dssp TTTEEEEEEEE-CCSSHHHHHHHHHHHHHHTHHHHHHHTEEEEEEECCTTCCSCCEEEEEECSS
T ss_pred CCCceEEEEee-CCCCccccchhhhHHHHHHHHHHHHhccCceEecCCCCCCCceEEEEecCCc
Confidence 36777664444 333444444 4999999999999998873 689999996
No 29
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=28.61 E-value=7.3 Score=30.81 Aligned_cols=31 Identities=23% Similarity=0.763 Sum_probs=19.7
Q ss_pred ceeeC--ccchhhccCC-CCC------CCCCCCCCceecC
Q 004430 645 EWVQC--NKCRKWRMLD-PGF------DTKSLPVEWFCYM 675 (754)
Q Consensus 645 ~WVQC--d~C~KWR~Lp-~~~------~~~~lp~~W~C~m 675 (754)
.+||| +.|..|=+.. .++ ....+|+.|+|..
T Consensus 29 ~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~ 68 (78)
T d1wewa_ 29 SMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEI 68 (78)
T ss_dssp CEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHH
T ss_pred cEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCC
Confidence 45555 5899998754 111 2245778899953
Done!