Query 004437
Match_columns 753
No_of_seqs 295 out of 2293
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 23:26:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004437.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004437hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 8E-129 2E-133 1037.8 58.0 700 6-753 2-710 (972)
2 KOG0204 Calcium transporting A 100.0 1E-112 2E-117 912.6 51.6 657 12-753 102-771 (1034)
3 TIGR01523 ATPase-IID_K-Na pota 100.0 1E-110 2E-115 992.6 71.2 695 7-753 6-778 (1053)
4 COG0474 MgtA Cation transport 100.0 6E-110 1E-114 977.4 59.0 648 6-753 21-671 (917)
5 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2E-106 5E-111 959.5 69.8 675 4-753 13-716 (997)
6 PRK10517 magnesium-transportin 100.0 1E-104 3E-109 929.6 67.2 616 7-753 48-669 (902)
7 TIGR01517 ATPase-IIB_Ca plasma 100.0 7E-104 2E-108 936.2 68.6 654 12-753 43-701 (941)
8 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-103 4E-108 927.4 70.5 640 7-752 3-649 (884)
9 PRK15122 magnesium-transportin 100.0 1E-103 3E-108 922.8 68.6 628 7-753 26-669 (903)
10 TIGR01524 ATPase-IIIB_Mg magne 100.0 4E-103 9E-108 918.0 68.3 615 7-753 14-634 (867)
11 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2.3E-99 5E-104 894.1 66.9 657 57-753 1-662 (917)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 1.5E-98 3E-103 869.0 63.6 565 27-753 1-566 (755)
13 TIGR01657 P-ATPase-V P-type AT 100.0 4.1E-97 9E-102 886.3 60.2 624 25-746 137-827 (1054)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 3.1E-95 7E-100 777.2 33.3 674 5-753 36-738 (1019)
15 TIGR01652 ATPase-Plipid phosph 100.0 1.9E-91 4.2E-96 840.3 48.6 668 40-751 1-797 (1057)
16 PLN03190 aminophospholipid tra 100.0 3.4E-89 7.3E-94 810.4 55.8 670 38-751 85-900 (1178)
17 KOG0208 Cation transport ATPas 100.0 8.1E-88 1.8E-92 731.1 42.3 647 24-746 157-878 (1140)
18 PRK01122 potassium-transportin 100.0 1.7E-83 3.6E-88 718.0 53.5 507 59-753 29-539 (679)
19 PRK14010 potassium-transportin 100.0 2.2E-82 4.7E-87 708.3 52.2 501 60-753 29-535 (673)
20 TIGR01497 kdpB K+-transporting 100.0 1.3E-79 2.9E-84 684.7 53.9 508 59-753 28-540 (675)
21 KOG0205 Plasma membrane H+-tra 100.0 2.7E-78 5.9E-83 628.0 34.1 594 9-753 19-616 (942)
22 KOG0206 P-type ATPase [General 100.0 9.4E-79 2E-83 694.9 32.8 670 36-751 28-823 (1151)
23 KOG0210 P-type ATPase [Inorgan 100.0 2.8E-78 6E-83 631.0 29.7 648 35-751 74-810 (1051)
24 KOG0209 P-type ATPase [Inorgan 100.0 2.3E-75 5E-80 620.0 31.5 630 4-750 141-835 (1160)
25 COG2217 ZntA Cation transport 100.0 9.7E-73 2.1E-77 630.5 49.8 458 94-753 173-631 (713)
26 PRK11033 zntA zinc/cadmium/mer 100.0 1.1E-69 2.4E-74 626.1 50.6 453 94-752 205-659 (741)
27 TIGR01494 ATPase_P-type ATPase 100.0 1.3E-67 2.7E-72 590.8 46.5 426 103-746 4-432 (499)
28 KOG0207 Cation transport ATPas 100.0 1.8E-68 3.8E-73 581.3 36.7 474 94-753 339-817 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 4.6E-67 9.9E-72 591.3 45.2 460 94-752 17-478 (556)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 6.5E-66 1.4E-70 579.6 53.4 443 94-752 52-497 (562)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.5E-66 5.5E-71 581.2 45.5 439 94-751 17-456 (536)
32 PRK10671 copA copper exporting 100.0 1.1E-64 2.5E-69 597.0 54.9 458 94-752 284-743 (834)
33 COG2216 KdpB High-affinity K+ 100.0 2.2E-58 4.8E-63 469.6 34.1 505 62-752 31-540 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 9E-36 2E-40 300.6 23.3 228 101-356 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.3E-22 2.9E-27 202.7 12.6 97 613-740 115-215 (215)
36 PF00690 Cation_ATPase_N: Cati 99.6 6.5E-15 1.4E-19 116.9 8.2 69 8-76 1-69 (69)
37 PF13246 Hydrolase_like2: Puta 99.5 2.2E-14 4.8E-19 120.2 7.5 88 428-542 1-90 (91)
38 COG4087 Soluble P-type ATPase 99.5 3E-13 6.6E-18 114.5 9.1 100 614-745 19-118 (152)
39 smart00831 Cation_ATPase_N Cat 99.3 1.5E-11 3.3E-16 96.2 7.2 62 19-80 2-63 (64)
40 KOG4383 Uncharacterized conser 99.0 1.3E-07 2.9E-12 101.2 24.8 213 531-746 698-1019(1354)
41 COG0561 Cof Predicted hydrolas 99.0 1.8E-09 4E-14 111.3 9.9 41 626-666 21-61 (264)
42 PRK10513 sugar phosphate phosp 98.9 3.2E-09 6.8E-14 110.0 10.6 42 624-665 19-60 (270)
43 PRK15126 thiamin pyrimidine py 98.9 2.4E-09 5.2E-14 110.9 9.7 42 625-666 19-60 (272)
44 PRK01158 phosphoglycolate phos 98.9 3E-09 6.6E-14 107.3 9.6 126 626-752 21-204 (230)
45 PRK10976 putative hydrolase; P 98.9 4.1E-09 9E-14 108.8 10.4 42 625-666 19-60 (266)
46 TIGR01487 SPP-like sucrose-pho 98.9 4.4E-09 9.5E-14 104.8 10.2 127 625-752 18-194 (215)
47 TIGR02137 HSK-PSP phosphoserin 98.9 7.4E-09 1.6E-13 101.2 9.1 99 625-746 68-170 (203)
48 TIGR01482 SPP-subfamily Sucros 98.8 1.4E-08 3E-13 102.1 10.7 127 625-752 15-196 (225)
49 PLN02887 hydrolase family prot 98.8 1.3E-08 2.8E-13 113.9 10.0 41 625-665 325-365 (580)
50 PRK03669 mannosyl-3-phosphogly 98.8 2.9E-08 6.2E-13 102.6 11.8 41 625-665 24-64 (271)
51 PF08282 Hydrolase_3: haloacid 98.8 2.1E-08 4.5E-13 102.6 10.3 42 624-665 14-55 (254)
52 COG0560 SerB Phosphoserine pho 98.8 2.7E-08 5.8E-13 97.7 9.9 103 624-746 76-186 (212)
53 TIGR01486 HAD-SF-IIB-MPGP mann 98.8 6E-08 1.3E-12 99.4 12.8 41 626-666 17-57 (256)
54 PRK10530 pyridoxal phosphate ( 98.7 7.4E-08 1.6E-12 99.9 11.1 42 625-666 20-61 (272)
55 PRK00192 mannosyl-3-phosphogly 98.7 1.4E-07 3E-12 97.6 13.1 43 624-666 20-62 (273)
56 PRK11133 serB phosphoserine ph 98.7 4.5E-08 9.7E-13 102.3 9.0 106 625-751 181-293 (322)
57 TIGR02726 phenyl_P_delta pheny 98.7 2.9E-08 6.3E-13 93.4 6.9 87 632-752 41-129 (169)
58 TIGR01670 YrbI-phosphatas 3-de 98.6 1.3E-07 2.8E-12 88.4 8.5 95 615-751 24-122 (154)
59 TIGR00099 Cof-subfamily Cof su 98.6 3.2E-07 7E-12 94.1 10.6 41 625-665 16-56 (256)
60 TIGR02461 osmo_MPG_phos mannos 98.5 5.7E-07 1.2E-11 89.8 10.2 44 623-666 13-56 (225)
61 KOG1615 Phosphoserine phosphat 98.5 3.4E-07 7.4E-12 84.1 6.6 108 625-746 88-199 (227)
62 PRK09484 3-deoxy-D-manno-octul 98.4 5.6E-07 1.2E-11 86.8 8.0 84 632-751 55-142 (183)
63 TIGR02463 MPGP_rel mannosyl-3- 98.4 2.4E-06 5.1E-11 85.5 12.1 40 626-665 17-56 (221)
64 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 3.3E-06 7.2E-11 83.1 11.1 106 625-746 80-189 (201)
65 COG1778 Low specificity phosph 98.3 8.5E-07 1.8E-11 78.8 5.5 84 632-751 42-129 (170)
66 TIGR00338 serB phosphoserine p 98.3 2.7E-06 5.9E-11 85.0 9.2 104 625-746 85-194 (219)
67 PRK13582 thrH phosphoserine ph 98.3 3.1E-06 6.8E-11 83.6 9.0 101 625-746 68-170 (205)
68 TIGR03333 salvage_mtnX 2-hydro 98.2 5.4E-06 1.2E-10 82.4 10.4 112 624-746 69-182 (214)
69 PRK14502 bifunctional mannosyl 98.2 9.2E-06 2E-10 90.9 12.5 40 626-665 434-473 (694)
70 TIGR01485 SPP_plant-cyano sucr 98.2 5.7E-06 1.2E-10 84.4 9.8 128 623-751 19-214 (249)
71 PF12710 HAD: haloacid dehalog 98.2 4.2E-06 9E-11 81.7 8.3 92 628-737 92-192 (192)
72 PRK12702 mannosyl-3-phosphogly 98.2 1.6E-05 3.5E-10 80.0 12.0 44 623-666 16-59 (302)
73 PRK10187 trehalose-6-phosphate 98.1 1.4E-05 3.1E-10 81.9 11.1 127 625-752 36-225 (266)
74 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 7E-06 1.5E-10 80.9 8.6 105 623-746 85-197 (202)
75 TIGR01488 HAD-SF-IB Haloacid D 98.1 6.6E-06 1.4E-10 79.1 8.0 96 626-739 74-177 (177)
76 PLN02382 probable sucrose-phos 98.1 1.3E-05 2.8E-10 87.2 10.9 126 625-751 28-225 (413)
77 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.4E-05 3.1E-10 79.7 9.7 109 625-744 74-184 (219)
78 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 1.4E-05 3.1E-10 77.5 9.3 113 624-744 71-186 (188)
79 TIGR02471 sucr_syn_bact_C sucr 98.1 1E-05 2.2E-10 81.8 8.2 43 708-751 159-205 (236)
80 cd01427 HAD_like Haloacid deha 97.9 3.4E-05 7.3E-10 70.2 8.2 118 621-744 20-138 (139)
81 PLN02954 phosphoserine phospha 97.9 5.7E-05 1.2E-09 75.7 10.3 104 625-746 84-197 (224)
82 PTZ00174 phosphomannomutase; P 97.9 7.2E-05 1.6E-09 76.0 10.5 45 707-752 187-236 (247)
83 TIGR01484 HAD-SF-IIB HAD-super 97.8 0.00019 4.1E-09 70.7 10.9 39 625-663 17-55 (204)
84 COG0546 Gph Predicted phosphat 97.7 0.00026 5.7E-09 70.6 10.1 96 623-747 87-192 (220)
85 PRK13222 phosphoglycolate phos 97.6 0.0002 4.3E-09 71.8 8.5 98 624-745 92-192 (226)
86 PRK08238 hypothetical protein; 97.5 0.00028 6.1E-09 78.0 8.9 94 625-746 72-165 (479)
87 PRK11590 hypothetical protein; 97.5 0.00066 1.4E-08 67.2 10.3 105 625-746 95-202 (211)
88 TIGR01545 YfhB_g-proteo haloac 97.5 0.00082 1.8E-08 66.3 10.6 106 625-746 94-201 (210)
89 PRK14501 putative bifunctional 97.4 0.0016 3.5E-08 76.9 14.3 127 625-752 514-705 (726)
90 TIGR01449 PGP_bact 2-phosphogl 97.4 0.00041 8.8E-09 68.9 7.7 90 625-743 85-181 (213)
91 PRK13223 phosphoglycolate phos 97.4 0.00046 1E-08 71.2 8.1 89 624-741 100-195 (272)
92 PF05116 S6PP: Sucrose-6F-phos 97.4 0.00047 1E-08 69.9 7.9 44 707-751 164-211 (247)
93 TIGR01454 AHBA_synth_RP 3-amin 97.3 0.00045 9.8E-09 68.1 6.3 97 625-743 75-171 (205)
94 TIGR01544 HAD-SF-IE haloacid d 97.2 0.0013 2.7E-08 66.7 8.4 45 624-668 120-164 (277)
95 smart00775 LNS2 LNS2 domain. T 97.2 0.0022 4.8E-08 59.9 9.5 105 623-741 25-140 (157)
96 PRK10826 2-deoxyglucose-6-phos 97.2 0.0013 2.7E-08 65.9 8.4 91 624-744 91-189 (222)
97 PRK13288 pyrophosphatase PpaX; 97.1 0.00091 2E-08 66.4 6.9 95 626-742 83-177 (214)
98 PRK11009 aphA acid phosphatase 97.1 0.0015 3.2E-08 65.1 8.2 87 624-741 113-205 (237)
99 PRK13226 phosphoglycolate phos 97.1 0.0014 3E-08 65.9 7.8 97 625-743 95-191 (229)
100 TIGR01672 AphA HAD superfamily 97.1 0.0012 2.5E-08 66.0 7.1 83 626-741 115-205 (237)
101 TIGR01548 HAD-SF-IA-hyp1 haloa 96.9 0.0047 1E-07 60.4 9.1 94 623-739 104-197 (197)
102 PRK13225 phosphoglycolate phos 96.9 0.004 8.7E-08 64.0 8.9 89 625-742 142-234 (273)
103 TIGR03351 PhnX-like phosphonat 96.8 0.003 6.4E-08 63.0 7.3 95 624-743 86-186 (220)
104 TIGR01685 MDP-1 magnesium-depe 96.8 0.0078 1.7E-07 57.0 9.4 114 612-744 32-154 (174)
105 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.0055 1.2E-07 55.6 7.9 88 624-741 24-125 (132)
106 PLN02770 haloacid dehalogenase 96.8 0.0041 8.8E-08 63.3 7.8 96 625-742 108-203 (248)
107 PHA02530 pseT polynucleotide k 96.7 0.0037 8E-08 65.7 7.6 108 621-743 183-292 (300)
108 TIGR01428 HAD_type_II 2-haloal 96.7 0.0047 1E-07 60.4 7.8 94 625-742 92-187 (198)
109 TIGR01422 phosphonatase phosph 96.6 0.006 1.3E-07 62.3 7.8 93 625-741 99-195 (253)
110 PLN03243 haloacid dehalogenase 96.5 0.007 1.5E-07 61.8 7.7 96 625-742 109-204 (260)
111 TIGR02253 CTE7 HAD superfamily 96.5 0.0076 1.6E-07 60.1 7.5 93 625-741 94-189 (221)
112 COG4359 Uncharacterized conser 96.4 0.0054 1.2E-07 56.4 5.3 109 625-744 73-183 (220)
113 TIGR01533 lipo_e_P4 5'-nucleot 96.4 0.019 4.1E-07 58.3 9.9 87 623-737 116-205 (266)
114 PLN02580 trehalose-phosphatase 96.4 0.037 8E-07 59.0 12.1 47 703-750 293-354 (384)
115 PRK14988 GMP/IMP nucleotidase; 96.3 0.011 2.4E-07 59.1 7.5 90 625-742 93-188 (224)
116 TIGR01675 plant-AP plant acid 96.3 0.028 6.1E-07 55.4 10.1 81 624-734 119-210 (229)
117 PRK06769 hypothetical protein; 96.3 0.018 3.9E-07 54.9 8.5 96 626-742 29-132 (173)
118 TIGR01509 HAD-SF-IA-v3 haloaci 96.3 0.013 2.8E-07 56.3 7.7 88 625-741 85-178 (183)
119 PF13419 HAD_2: Haloacid dehal 96.3 0.0053 1.2E-07 58.3 4.9 96 624-743 76-173 (176)
120 TIGR01990 bPGM beta-phosphoglu 96.3 0.0075 1.6E-07 58.2 5.9 92 625-742 87-180 (185)
121 PRK13478 phosphonoacetaldehyde 96.2 0.013 2.9E-07 60.3 7.9 93 625-741 101-197 (267)
122 TIGR01668 YqeG_hyp_ppase HAD s 96.2 0.016 3.5E-07 55.0 7.7 84 625-741 43-130 (170)
123 PRK11587 putative phosphatase; 96.2 0.012 2.6E-07 58.5 7.0 99 625-746 83-182 (218)
124 PLN02575 haloacid dehalogenase 96.1 0.014 3E-07 62.2 7.4 94 625-742 216-311 (381)
125 TIGR02009 PGMB-YQAB-SF beta-ph 96.1 0.0073 1.6E-07 58.3 4.7 93 624-742 87-181 (185)
126 COG3769 Predicted hydrolase (H 96.0 0.054 1.2E-06 51.6 9.7 38 629-666 27-64 (274)
127 PLN02779 haloacid dehalogenase 96.0 0.024 5.2E-07 58.9 8.3 98 625-744 144-243 (286)
128 TIGR01656 Histidinol-ppas hist 95.8 0.035 7.6E-07 51.3 7.8 97 625-742 27-140 (147)
129 TIGR01549 HAD-SF-IA-v1 haloaci 95.8 0.029 6.3E-07 52.2 7.3 83 626-740 65-154 (154)
130 TIGR02252 DREG-2 REG-2-like, H 95.7 0.028 6E-07 55.2 7.3 89 625-742 105-200 (203)
131 smart00577 CPDc catalytic doma 95.7 0.012 2.6E-07 54.5 4.0 96 624-744 44-139 (148)
132 PRK08942 D,D-heptose 1,7-bisph 95.6 0.051 1.1E-06 52.3 8.5 26 626-651 30-55 (181)
133 PLN02940 riboflavin kinase 95.5 0.027 5.9E-07 61.0 6.9 94 625-742 93-189 (382)
134 PRK06698 bifunctional 5'-methy 95.5 0.039 8.4E-07 61.7 8.3 92 625-741 330-421 (459)
135 TIGR01681 HAD-SF-IIIC HAD-supe 95.5 0.032 7E-07 50.2 6.3 39 625-663 29-68 (128)
136 TIGR01261 hisB_Nterm histidino 95.5 0.035 7.5E-07 52.1 6.4 87 625-743 29-143 (161)
137 PLN02205 alpha,alpha-trehalose 95.4 0.18 3.8E-06 60.2 13.6 38 624-661 615-653 (854)
138 COG4030 Uncharacterized protei 95.2 0.082 1.8E-06 50.5 7.9 122 625-751 83-239 (315)
139 PRK09449 dUMP phosphatase; Pro 95.1 0.069 1.5E-06 53.3 7.7 88 625-742 95-191 (224)
140 PRK05446 imidazole glycerol-ph 94.8 0.11 2.3E-06 55.2 8.6 90 624-743 29-144 (354)
141 TIGR02254 YjjG/YfnB HAD superf 94.7 0.078 1.7E-06 52.8 7.1 87 625-741 97-192 (224)
142 PLN02811 hydrolase 94.7 0.1 2.3E-06 51.9 7.8 89 625-742 78-179 (220)
143 COG2179 Predicted hydrolase of 94.6 0.18 3.9E-06 46.2 8.1 83 625-740 46-131 (175)
144 PF06888 Put_Phosphatase: Puta 94.6 0.18 3.9E-06 50.1 9.0 110 625-742 71-194 (234)
145 TIGR00213 GmhB_yaeD D,D-heptos 94.5 0.16 3.5E-06 48.5 8.3 27 626-652 27-53 (176)
146 TIGR01664 DNA-3'-Pase DNA 3'-p 94.2 0.13 2.7E-06 48.7 6.7 40 626-665 43-94 (166)
147 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.2 0.22 4.8E-06 50.4 9.0 48 618-665 17-66 (242)
148 TIGR01691 enolase-ppase 2,3-di 94.1 0.18 4E-06 49.9 7.8 98 622-743 92-192 (220)
149 TIGR01686 FkbH FkbH-like domai 94.0 0.18 3.8E-06 53.4 8.1 89 625-744 31-127 (320)
150 PF13344 Hydrolase_6: Haloacid 93.9 0.13 2.9E-06 43.9 5.7 89 618-741 7-100 (101)
151 KOG3120 Predicted haloacid deh 93.6 0.39 8.5E-06 46.0 8.5 115 625-746 84-209 (256)
152 PF09419 PGP_phosphatase: Mito 93.6 0.3 6.5E-06 45.7 7.8 87 622-740 56-157 (168)
153 PRK09456 ?-D-glucose-1-phospha 93.6 0.16 3.4E-06 49.7 6.3 90 625-742 84-180 (199)
154 TIGR02247 HAD-1A3-hyp Epoxide 93.5 0.13 2.8E-06 50.8 5.6 89 625-742 94-191 (211)
155 PLN02645 phosphoglycolate phos 93.2 0.24 5.2E-06 52.1 7.4 48 618-665 37-87 (311)
156 PLN03017 trehalose-phosphatase 93.0 1.7 3.6E-05 46.2 13.2 46 613-659 119-166 (366)
157 PF08235 LNS2: LNS2 (Lipin/Ned 93.0 0.59 1.3E-05 43.1 8.5 103 624-742 26-141 (157)
158 KOG3040 Predicted sugar phosph 92.1 0.68 1.5E-05 44.0 7.8 52 615-666 13-67 (262)
159 TIGR01993 Pyr-5-nucltdase pyri 92.0 0.52 1.1E-05 45.3 7.5 87 625-743 84-181 (184)
160 PHA02597 30.2 hypothetical pro 91.8 0.66 1.4E-05 45.1 8.1 92 625-742 74-169 (197)
161 PLN02919 haloacid dehalogenase 91.8 0.43 9.3E-06 58.8 8.0 93 626-741 162-256 (1057)
162 PF03767 Acid_phosphat_B: HAD 91.7 0.39 8.5E-06 47.9 6.3 81 625-735 115-207 (229)
163 TIGR00685 T6PP trehalose-phosp 91.4 0.34 7.3E-06 49.1 5.7 46 701-746 160-217 (244)
164 PRK10563 6-phosphogluconate ph 91.3 0.34 7.3E-06 48.2 5.5 94 625-744 88-183 (221)
165 TIGR01680 Veg_Stor_Prot vegeta 91.0 1.3 2.9E-05 44.7 9.1 81 623-733 143-235 (275)
166 PRK10725 fructose-1-P/6-phosph 90.5 0.52 1.1E-05 45.4 5.8 90 630-742 92-181 (188)
167 TIGR01689 EcbF-BcbF capsule bi 90.4 1.3 2.8E-05 39.4 7.7 72 624-695 23-121 (126)
168 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.3 1.5 3.2E-05 44.6 9.1 49 618-666 10-61 (249)
169 PLN02423 phosphomannomutase 89.9 0.28 6.1E-06 49.6 3.5 39 707-746 188-231 (245)
170 COG0637 Predicted phosphatase/ 89.5 0.63 1.4E-05 46.3 5.6 98 624-743 85-182 (221)
171 PLN02177 glycerol-3-phosphate 88.1 2.6 5.6E-05 47.2 9.6 97 626-746 111-214 (497)
172 TIGR01458 HAD-SF-IIA-hyp3 HAD- 86.3 1 2.2E-05 46.0 4.9 48 618-665 10-64 (257)
173 TIGR01684 viral_ppase viral ph 85.6 1.5 3.2E-05 44.8 5.5 41 626-666 146-187 (301)
174 TIGR01452 PGP_euk phosphoglyco 85.3 2.6 5.7E-05 43.5 7.5 47 619-665 12-61 (279)
175 PRK10444 UMP phosphatase; Prov 84.4 1 2.2E-05 45.6 3.8 48 618-665 10-60 (248)
176 COG3700 AphA Acid phosphatase 83.5 2.7 5.9E-05 38.9 5.6 88 626-743 115-208 (237)
177 TIGR02251 HIF-SF_euk Dullard-l 82.3 1 2.2E-05 42.2 2.7 93 622-743 39-135 (162)
178 PRK10748 flavin mononucleotide 82.1 2.4 5.2E-05 42.7 5.4 86 625-744 113-205 (238)
179 COG0241 HisB Histidinol phosph 82.0 11 0.00024 35.8 9.3 98 626-742 32-144 (181)
180 PHA03398 viral phosphatase sup 80.8 3 6.6E-05 42.7 5.5 41 626-666 148-189 (303)
181 TIGR01663 PNK-3'Pase polynucle 79.6 7.5 0.00016 43.7 8.7 39 626-664 198-248 (526)
182 COG1011 Predicted hydrolase (H 79.1 6.5 0.00014 39.0 7.5 41 624-665 98-138 (229)
183 COG1877 OtsB Trehalose-6-phosp 77.9 21 0.00046 36.3 10.5 52 613-664 28-80 (266)
184 COG2503 Predicted secreted aci 73.8 21 0.00046 35.2 8.7 83 626-736 123-209 (274)
185 TIGR01493 HAD-SF-IA-v2 Haloaci 73.0 4.9 0.00011 38.0 4.4 83 625-738 90-174 (175)
186 PF12689 Acid_PPase: Acid Phos 71.3 22 0.00047 33.5 8.1 40 626-665 46-86 (169)
187 TIGR02244 HAD-IG-Ncltidse HAD 69.7 16 0.00034 38.7 7.6 105 627-740 186-316 (343)
188 TIGR01657 P-ATPase-V P-type AT 67.1 2E+02 0.0042 36.1 17.6 23 558-580 658-680 (1054)
189 COG0647 NagD Predicted sugar p 62.9 9.2 0.0002 39.0 4.1 45 617-661 16-60 (269)
190 TIGR01458 HAD-SF-IIA-hyp3 HAD- 62.3 12 0.00027 38.0 5.0 97 627-745 122-223 (257)
191 TIGR00216 ispH_lytB (E)-4-hydr 61.0 68 0.0015 32.9 10.0 151 559-746 100-262 (280)
192 PTZ00445 p36-lilke protein; Pr 58.9 20 0.00044 34.8 5.4 74 559-654 29-104 (219)
193 TIGR01501 MthylAspMutase methy 58.0 28 0.00061 31.4 5.9 80 567-664 24-111 (134)
194 PRK01045 ispH 4-hydroxy-3-meth 57.2 73 0.0016 33.1 9.5 152 559-746 100-264 (298)
195 TIGR01459 HAD-SF-IIA-hyp4 HAD- 54.4 20 0.00044 36.0 5.0 94 627-743 140-237 (242)
196 PF05822 UMPH-1: Pyrimidine 5' 54.0 29 0.00064 34.7 5.8 46 624-669 89-134 (246)
197 TIGR01517 ATPase-IIB_Ca plasma 53.9 1.7E+02 0.0036 36.1 13.6 29 553-581 576-604 (941)
198 PRK02261 methylaspartate mutas 53.7 41 0.00088 30.5 6.3 81 566-664 25-113 (137)
199 PLN02423 phosphomannomutase 53.3 20 0.00043 36.2 4.8 32 625-657 24-55 (245)
200 TIGR01456 CECR5 HAD-superfamil 50.1 67 0.0015 33.9 8.3 48 618-665 9-64 (321)
201 COG0474 MgtA Cation transport 50.0 3.7E+02 0.008 33.1 15.5 198 7-238 41-250 (917)
202 TIGR01460 HAD-SF-IIA Haloacid 50.0 30 0.00064 34.7 5.4 48 618-665 7-58 (236)
203 PF12368 DUF3650: Protein of u 49.9 14 0.00031 23.0 1.8 15 25-39 13-27 (28)
204 PF03120 DNA_ligase_OB: NAD-de 48.1 9.2 0.0002 31.0 1.0 23 146-168 45-68 (82)
205 PF13242 Hydrolase_like: HAD-h 47.4 26 0.00056 27.7 3.6 35 712-746 13-49 (75)
206 cd02071 MM_CoA_mut_B12_BD meth 47.1 27 0.0006 30.8 4.1 81 567-665 22-104 (122)
207 PF14336 DUF4392: Domain of un 46.4 52 0.0011 34.1 6.6 39 627-665 62-101 (291)
208 PRK12360 4-hydroxy-3-methylbut 45.9 1.5E+02 0.0033 30.4 9.7 151 559-746 103-263 (281)
209 COG1188 Ribosome-associated he 44.9 49 0.0011 27.9 4.8 33 131-165 31-63 (100)
210 TIGR01647 ATPase-IIIA_H plasma 44.6 4E+02 0.0086 32.0 14.5 29 553-581 439-467 (755)
211 cd02072 Glm_B12_BD B12 binding 43.5 50 0.0011 29.4 5.1 81 567-665 22-110 (128)
212 CHL00200 trpA tryptophan synth 41.8 1.6E+02 0.0035 30.0 9.1 40 707-746 188-231 (263)
213 PF13380 CoA_binding_2: CoA bi 39.9 36 0.00078 29.8 3.6 39 626-664 64-103 (116)
214 PF12710 HAD: haloacid dehalog 37.0 16 0.00034 34.9 1.0 13 363-375 1-13 (192)
215 TIGR00640 acid_CoA_mut_C methy 36.3 53 0.0011 29.5 4.2 82 566-665 24-107 (132)
216 TIGR02250 FCP1_euk FCP1-like p 36.0 58 0.0013 30.2 4.6 42 623-665 56-97 (156)
217 PF15584 Imm44: Immunity prote 35.8 17 0.00036 29.9 0.8 19 153-171 13-31 (94)
218 PLN02151 trehalose-phosphatase 35.8 67 0.0015 34.2 5.5 35 626-661 121-155 (354)
219 PF00122 E1-E2_ATPase: E1-E2 A 35.3 2.4E+02 0.0052 27.7 9.4 22 152-173 40-61 (230)
220 PRK04980 hypothetical protein; 34.6 57 0.0012 27.7 3.8 58 131-196 18-82 (102)
221 KOG3085 Predicted hydrolase (H 34.3 1.1E+02 0.0023 30.6 6.3 91 626-741 114-207 (237)
222 TIGR01452 PGP_euk phosphoglyco 34.3 57 0.0012 33.6 4.7 31 711-741 210-241 (279)
223 COG3981 Predicted acetyltransf 34.0 71 0.0015 29.9 4.6 109 557-665 13-156 (174)
224 cd05017 SIS_PGI_PMI_1 The memb 33.1 78 0.0017 27.6 4.7 37 626-664 55-91 (119)
225 PRK15108 biotin synthase; Prov 31.6 4.9E+02 0.011 27.7 11.4 86 628-732 111-199 (345)
226 TIGR01524 ATPase-IIIB_Mg magne 31.2 8.9E+02 0.019 29.6 14.7 29 553-581 512-540 (867)
227 cd02067 B12-binding B12 bindin 31.1 55 0.0012 28.5 3.5 55 611-665 48-104 (119)
228 PRK01122 potassium-transportin 30.4 9.7E+02 0.021 28.3 17.4 87 553-664 442-530 (679)
229 PF00389 2-Hacid_dh: D-isomer 30.2 2.2E+02 0.0048 25.2 7.4 47 699-746 41-89 (133)
230 TIGR01106 ATPase-IIC_X-K sodiu 29.7 1E+03 0.022 29.6 15.2 65 97-162 109-183 (997)
231 PF05240 APOBEC_C: APOBEC-like 29.7 61 0.0013 24.1 2.8 25 628-652 2-26 (55)
232 TIGR01652 ATPase-Plipid phosph 29.4 1.2E+03 0.027 29.2 16.0 66 96-162 55-128 (1057)
233 PRK00087 4-hydroxy-3-methylbut 28.7 2.8E+02 0.006 32.6 9.6 153 559-746 100-260 (647)
234 cd00860 ThrRS_anticodon ThrRS 28.4 1.2E+02 0.0025 24.6 4.8 47 619-665 6-53 (91)
235 COG0309 HypE Hydrogenase matur 27.9 2.9E+02 0.0063 29.1 8.3 84 619-727 219-306 (339)
236 PRK11507 ribosome-associated p 27.5 80 0.0017 24.8 3.2 26 135-161 38-63 (70)
237 cd01994 Alpha_ANH_like_IV This 27.4 4.4E+02 0.0096 25.4 9.3 37 629-665 11-60 (194)
238 PF06941 NT5C: 5' nucleotidase 27.3 50 0.0011 31.7 2.7 29 625-653 73-101 (191)
239 PRK13125 trpA tryptophan synth 26.5 4.3E+02 0.0092 26.5 9.4 35 628-662 116-152 (244)
240 KOG2882 p-Nitrophenyl phosphat 26.5 98 0.0021 31.8 4.6 48 618-665 31-81 (306)
241 cd05008 SIS_GlmS_GlmD_1 SIS (S 26.3 69 0.0015 28.1 3.3 29 626-654 58-86 (126)
242 PF05761 5_nucleotid: 5' nucle 26.3 68 0.0015 35.4 3.8 36 627-662 185-220 (448)
243 TIGR03679 arCOG00187 arCOG0018 26.1 4.3E+02 0.0092 26.0 9.1 37 629-665 9-58 (218)
244 KOG2914 Predicted haloacid-hal 26.0 1.8E+02 0.004 28.7 6.3 33 626-658 93-125 (222)
245 COG0279 GmhA Phosphoheptose is 25.9 76 0.0016 29.5 3.3 33 627-659 122-154 (176)
246 cd05014 SIS_Kpsf KpsF-like pro 25.7 53 0.0012 28.9 2.4 32 626-657 59-90 (128)
247 PRK10517 magnesium-transportin 25.7 1.3E+03 0.029 28.3 15.9 29 553-581 547-575 (902)
248 PF13275 S4_2: S4 domain; PDB: 25.6 41 0.00089 26.0 1.4 24 135-159 34-57 (65)
249 PF11431 Transport_MerF: Membr 25.1 2.6E+02 0.0056 19.9 4.9 20 64-83 2-21 (46)
250 PRK14175 bifunctional 5,10-met 24.4 1.5E+02 0.0033 30.5 5.7 45 622-666 11-64 (286)
251 PRK14170 bifunctional 5,10-met 24.2 1.1E+02 0.0025 31.4 4.6 45 622-666 10-63 (284)
252 TIGR00612 ispG_gcpE 1-hydroxy- 24.1 1.2E+02 0.0027 31.7 4.8 146 558-746 150-315 (346)
253 PRK01045 ispH 4-hydroxy-3-meth 24.0 4E+02 0.0087 27.7 8.6 38 692-729 83-122 (298)
254 PLN02591 tryptophan synthase 23.8 5.9E+02 0.013 25.7 9.6 97 624-746 114-218 (250)
255 PF08645 PNK3P: Polynucleotide 23.5 73 0.0016 29.6 3.0 24 627-650 31-54 (159)
256 KOG1250 Threonine/serine dehyd 23.4 2.9E+02 0.0062 29.8 7.3 73 629-735 100-175 (457)
257 PRK15122 magnesium-transportin 23.4 1.4E+03 0.031 28.0 15.3 65 97-162 116-196 (903)
258 PRK14169 bifunctional 5,10-met 23.4 1.2E+02 0.0025 31.3 4.6 44 623-666 10-62 (282)
259 cd05710 SIS_1 A subgroup of th 23.4 73 0.0016 27.9 2.8 29 626-654 59-87 (120)
260 PRK05742 nicotinate-nucleotide 23.0 4E+02 0.0086 27.4 8.3 83 629-746 175-261 (277)
261 KOG3128 Uncharacterized conser 23.0 2.9E+02 0.0063 27.8 6.8 42 626-667 139-180 (298)
262 PF02401 LYTB: LytB protein; 23.0 46 0.00099 34.3 1.5 176 531-746 73-263 (281)
263 TIGR00216 ispH_lytB (E)-4-hydr 22.8 4.6E+02 0.0099 27.0 8.7 34 696-729 87-122 (280)
264 PRK08433 flagellar motor switc 22.4 51 0.0011 28.5 1.5 43 121-169 21-63 (111)
265 PF04273 DUF442: Putative phos 22.2 1.3E+02 0.0028 26.0 4.0 36 630-665 16-59 (110)
266 COG0078 ArgF Ornithine carbamo 22.1 4.7E+02 0.01 27.2 8.4 121 615-745 45-180 (310)
267 COG1832 Predicted CoA-binding 22.0 1.3E+02 0.0028 27.1 3.9 36 614-649 16-51 (140)
268 TIGR00640 acid_CoA_mut_C methy 21.8 5.8E+02 0.013 22.8 10.8 99 615-746 5-111 (132)
269 COG4229 Predicted enolase-phos 21.7 2.2E+02 0.0047 27.1 5.4 32 622-653 100-131 (229)
270 PRK04302 triosephosphate isome 21.5 2.9E+02 0.0063 27.2 7.0 26 626-651 99-124 (223)
271 PF09926 DUF2158: Uncharacteri 21.2 62 0.0013 23.9 1.5 12 152-163 2-13 (53)
272 COG1171 IlvA Threonine dehydra 21.1 2.3E+02 0.0049 30.1 6.2 60 644-737 78-137 (347)
273 cd04724 Tryptophan_synthase_al 21.1 5E+02 0.011 26.0 8.6 98 624-746 112-215 (242)
274 TIGR02370 pyl_corrinoid methyl 20.9 75 0.0016 30.8 2.5 79 567-665 107-188 (197)
275 TIGR00262 trpA tryptophan synt 20.9 6E+02 0.013 25.7 9.2 43 621-663 120-164 (256)
276 PRK08568 preprotein translocas 20.8 6.8E+02 0.015 27.9 10.3 54 27-80 365-422 (462)
277 KOG4175 Tryptophan synthase al 20.8 4.6E+02 0.0099 25.3 7.4 120 616-746 97-235 (268)
278 PF09953 DUF2187: Uncharacteri 20.5 2.4E+02 0.0052 21.2 4.3 33 152-188 5-37 (57)
279 PRK14194 bifunctional 5,10-met 20.4 5.5E+02 0.012 26.8 8.7 23 553-575 12-34 (301)
280 PF03129 HGTP_anticodon: Antic 20.2 1.7E+02 0.0037 24.0 4.3 48 618-665 3-54 (94)
281 PRK14189 bifunctional 5,10-met 20.1 6E+02 0.013 26.3 8.9 23 553-575 11-33 (285)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-129 Score=1037.81 Aligned_cols=700 Identities=52% Similarity=0.776 Sum_probs=627.4
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCC
Q 004437 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (753)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 85 (753)
+++|..+++|.+..|+|++++|||.+|+.+|++.||+|+++.....++|+.+++||.++++.+|+++|++|+++.+
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~---- 77 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD---- 77 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh----
Confidence 5679999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcc
Q 004437 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKV 165 (753)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~i 165 (753)
|.++++|.++++++.++++|||||++|++++|+++.++.++|+|+|+. +.+++.+|||||||.|+-||+|
T Consensus 78 ---------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~-~~i~A~eLVPGDiV~l~vGDkV 147 (972)
T KOG0202|consen 78 ---------FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKL-QHILARELVPGDIVELKVGDKI 147 (972)
T ss_pred ---------cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcc-cceehhccCCCCEEEEecCCcc
Confidence 456888889999999999999999999999999999999999999987 6799999999999999999999
Q ss_pred cccEEEEEeeCCcEEEEcccccCCCCccccCCCCCc-CCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHH
Q 004437 166 PADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVF-LDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQ 244 (753)
Q Consensus 166 PaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~-~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~ 244 (753)
|||.|+++. -++.||||+|||||.|+.|...... .++.+..++.|++|+||.|..|.++|+|+.||.+|.+|++.+.
T Consensus 148 PADlRl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~ 225 (972)
T KOG0202|consen 148 PADLRLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKM 225 (972)
T ss_pred ccceeEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHH
Confidence 999999987 4599999999999999999887776 6778889999999999999999999999999999999999999
Q ss_pred HhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccC
Q 004437 245 IHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPE 324 (753)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~ 324 (753)
++.. +..+||||+++|.+...+..++.++++.+|++.+++|. +|.+..+++..+.++|.+++++.++++|+
T Consensus 226 m~~~--e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~-------~p~~~g~~fk~~~~~f~IaVsLAVAAIPE 296 (972)
T KOG0202|consen 226 MQAT--ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL-------DPVHGGSWFKGALYYFKIAVSLAVAAIPE 296 (972)
T ss_pred Hhcc--CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc-------cccccccchhchhhhhhHHHHHHHHhccC
Confidence 9765 77799999999999999998999999999988766655 23333444778889999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCC
Q 004437 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPK 404 (753)
Q Consensus 325 ~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 404 (753)
+||+.++++++++.+||+|++++||+++++|+||.+++||+|||||||+|+|++.+++..+........++..+.+|+|.
T Consensus 297 GLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~ 376 (972)
T KOG0202|consen 297 GLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPE 376 (972)
T ss_pred CCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999987766667778888899988
Q ss_pred CCCcccCCCC----CccHHHHHHHHHHhhccCCeeecCC-CcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhh
Q 004437 405 DGGIVDWPCY----NMDANLQAMAKICAVCNDAGVYCDG-PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479 (753)
Q Consensus 405 ~~~~~~~~~~----~~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~ 479 (753)
.+...+.... ...+.++.++.++++||++.+.+++ +.|...|.|+|.||..+++++|++.....+...
T Consensus 377 g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~------- 449 (972)
T KOG0202|consen 377 GEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSN------- 449 (972)
T ss_pred CceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccc-------
Confidence 5554444222 2467789999999999999888766 778889999999999999999998755211110
Q ss_pred hcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCe--EEEEEcCChHHHHHhcccccccCC-ceeeCCHH
Q 004437 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGH--NQLLVKGSVESLLERSSHVQLADG-SVVPLDEP 556 (753)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~--~~~~~KGa~e~il~~c~~~~~~~~-~~~~l~~~ 556 (753)
...-.|+.+....++...++||+|+||+|||.+.+..++ +.+|+|||+|.++++|+++...+| ...|+++.
T Consensus 450 ------~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 450 ------EEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred ------cccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 001134444566777889999999999999999876664 799999999999999998888776 56999999
Q ss_pred HHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHH
Q 004437 557 CWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDD 636 (753)
Q Consensus 557 ~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~ 636 (753)
.|+.+.+...+|+++|+|||++|+++..++ .+......+...+..+|.||+|+|++|+.||+|++++++|+.
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~--------~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~ 595 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQ--------VPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIEL 595 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCccc--------ChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHH
Confidence 999999999999999999999999975431 111222334556788899999999999999999999999999
Q ss_pred HHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHH
Q 004437 637 CRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRML 716 (753)
Q Consensus 637 l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 716 (753)
|+++||+|+|+|||+..||.+||+++|+.....++.+.+++|.+|+.+++++......+ ..+|+|++|.+|.++|+.|
T Consensus 596 c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~--~~vFaR~~P~HK~kIVeaL 673 (972)
T KOG0202|consen 596 CRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRR--VLVFARAEPQHKLKIVEAL 673 (972)
T ss_pred HHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhc--ceEEEecCchhHHHHHHHH
Confidence 99999999999999999999999999999988888899999999999999999988888 7899999999999999999
Q ss_pred HHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 717 KEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 717 ~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|++|+.|+|+|||.||+|+||.||||||||++|+||+
T Consensus 674 q~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVa 710 (972)
T KOG0202|consen 674 QSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVA 710 (972)
T ss_pred HhcCCEEEecCCCccchhhhhhcccceeecCCccHhh
Confidence 9999999999999999999999999999999999985
No 2
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.6e-113 Score=912.64 Aligned_cols=657 Identities=33% Similarity=0.483 Sum_probs=562.9
Q ss_pred CHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCC
Q 004437 12 TVEQCLKEYNVKLDKGLSS--REVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGD 89 (753)
Q Consensus 12 ~~~~~~~~l~~~~~~GL~~--~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (753)
.+++|+++|+||+..||+. +|+.+|++.||+|.++.+++++||+++|++|++...+++.++|++++.++++....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~--- 178 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGI--- 178 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCC---
Confidence 5789999999999999987 89999999999999999999999999999999999999999999999999876531
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhh-cccccEEEeCCeeeeeecCCCCCCCcEEEecCCCccccc
Q 004437 90 SGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI-QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPAD 168 (753)
Q Consensus 90 ~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD 168 (753)
...|+++++|++.+++..++....+|++.++++.|++. ...++.|+|||+.+ +|+..|||||||+.|+.||.+|||
T Consensus 179 --~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~-~isI~diVVGDIv~lk~GDqvPAD 255 (1034)
T KOG0204|consen 179 --EDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQ-QISIYDLVVGDIVQLKIGDQVPAD 255 (1034)
T ss_pred --CcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEE-EEEEeeeeeccEEEeecCCccccc
Confidence 23689999998888888888899999999999988854 34578999999995 699999999999999999999999
Q ss_pred EEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhh
Q 004437 169 MRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (753)
Q Consensus 169 ~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~ 248 (753)
|+++++ +++.+|||++||||.+++|... .+++|++||++.+|+++++|+.+|.+|..|+++..+...
T Consensus 256 Gvli~g--n~L~iDESSlTGESd~v~k~~~-----------~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 256 GVLIQG--NSLKIDESSLTGESDHVQKSLD-----------KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred eEEEec--cceeEecccccCCCcceeccCC-----------CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 999985 7999999999999999999862 378999999999999999999999999999999988654
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccCCC--CcccccchhhHHHHHHHHHHHHHHhccCC
Q 004437 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLS-WDVVDGW--PANVQFSFEKCTYYFKIAVALAVAAIPEG 325 (753)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~l~~~i~llv~~iP~~ 325 (753)
...++|+|-++++++..+..+.+.++.+++++....|+. ....++- ........+.+..+|.+++.++++++|+|
T Consensus 323 --~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEG 400 (1034)
T KOG0204|consen 323 --GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEG 400 (1034)
T ss_pred --CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCC
Confidence 558999999999999999988888777766654433332 1111111 11111225667788889999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCC
Q 004437 326 LPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKD 405 (753)
Q Consensus 326 L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 405 (753)
||+++++++++++++|.+.+.+||+++++|++|..++||+|||||||+|+|+|.+.|+.+..+... .|.
T Consensus 401 LPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~----------~~~- 469 (1034)
T KOG0204|consen 401 LPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVN----------SPK- 469 (1034)
T ss_pred ccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccccc----------Ccc-
Confidence 999999999999999999999999999999999999999999999999999999999876533211 010
Q ss_pred CCcccCCCCCccHHHH-HHHHHHhhccCCeeecC-C--CcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhc
Q 004437 406 GGIVDWPCYNMDANLQ-AMAKICAVCNDAGVYCD-G--PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYL 481 (753)
Q Consensus 406 ~~~~~~~~~~~~~~~~-~~~~~~~~c~~~~~~~~-~--~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 481 (753)
..+.++.+. .++...+...+..+..+ . ......|+|+|.||+.+..++|.++...
T Consensus 470 -------~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~-------------- 528 (1034)
T KOG0204|consen 470 -------SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDV-------------- 528 (1034)
T ss_pred -------cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhh--------------
Confidence 012333433 44445555444444332 2 2678899999999999999999876544
Q ss_pred ccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHH
Q 004437 482 IDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLM 561 (753)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~ 561 (753)
+....+.+.+||+|.||+|+++++.+++..++|+|||+|.++.+|+++...+|+..+++++.+..+
T Consensus 529 --------------R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~ 594 (1034)
T KOG0204|consen 529 --------------RPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSF 594 (1034)
T ss_pred --------------cchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHH
Confidence 345567899999999999999999887663499999999999999999999999999999999999
Q ss_pred HHHHHHhhhccceEEEEEEeccccc---cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHH
Q 004437 562 LSRHLEMSSKGLRCLGMAYKDELGE---FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCR 638 (753)
Q Consensus 562 ~~~~~~~~~~G~rvl~~A~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~ 638 (753)
+..++.|+++|+|++++|||+.... ..+|. .....+.+|+++|++|++||+||++++||+.|+
T Consensus 595 ~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~--------------~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq 660 (1034)
T KOG0204|consen 595 KDVIEPMASEGLRTICLAYRDFVAGPDEEPSWD--------------NEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQ 660 (1034)
T ss_pred HHHHHHHHHhhhheeeEEeeccccCCCCCCCcc--------------ccccCCCCeEEEEEeeccCCCCCCcHHHHHHHH
Confidence 9999999999999999999983221 01111 123447899999999999999999999999999
Q ss_pred hCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHH
Q 004437 639 GAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKE 718 (753)
Q Consensus 639 ~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 718 (753)
+|||+|.|+||||..||++||.+|||..++.+ ..+++|.+|.++.++++.++..+ ..|+||.+|.||..+|+.+++
T Consensus 661 ~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pk--l~VlARSSP~DK~lLVk~L~~ 736 (1034)
T KOG0204|consen 661 RAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFRELSQEERDKIWPK--LRVLARSSPNDKHLLVKGLIK 736 (1034)
T ss_pred HcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhhhcCHHHHHhhhhh--heeeecCCCchHHHHHHHHHh
Confidence 99999999999999999999999999988765 57899999999999999999999 799999999999999999999
Q ss_pred cCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 719 ~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
+|++|+++|||+||+|||+.||||+||||.|+|||
T Consensus 737 ~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA 771 (1034)
T KOG0204|consen 737 QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA 771 (1034)
T ss_pred cCcEEEEecCCCCCchhhhhcccchhccccchhhh
Confidence 99999999999999999999999999999999986
No 3
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1e-110 Score=992.62 Aligned_cols=695 Identities=30% Similarity=0.465 Sum_probs=558.7
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (753)
+||.++++++++.|+|++.+|||++|+++|+++||+|+++.++++++|+.+++||.++++++++++++++++.+
T Consensus 6 ~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~------ 79 (1053)
T TIGR01523 6 AYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH------ 79 (1053)
T ss_pred chhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh------
Confidence 68999999999999999889999999999999999999999888999999999999999999999999999874
Q ss_pred CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCccc
Q 004437 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVP 166 (753)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iP 166 (753)
.|.++++|+++++++.+++++||+|+++++++|+++.+.+++|+|||++ ++|++++|||||||.|++||+||
T Consensus 80 -------~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~-~~I~a~eLVpGDIv~L~~Gd~VP 151 (1053)
T TIGR01523 80 -------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKS-DAIDSHDLVPGDICLLKTGDTIP 151 (1053)
T ss_pred -------hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCee-eecCHhhCCCCCEEEECCCCEee
Confidence 5788999999999999999999999999999999999999999999999 56999999999999999999999
Q ss_pred ccEEEEEeeCCcEEEEcccccCCCCccccCCCCCc--CCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHH
Q 004437 167 ADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVF--LDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQ 244 (753)
Q Consensus 167 aD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~--~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~ 244 (753)
|||+|+++ +++.||||+|||||.|+.|.+.... ..+....++.|++|+||.|.+|.+.++|++||.+|.+|++.+.
T Consensus 152 AD~rLi~~--~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~ 229 (1053)
T TIGR01523 152 ADLRLIET--KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAG 229 (1053)
T ss_pred ccEEEEEe--CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHH
Confidence 99999985 7899999999999999999874332 1234455678999999999999999999999999999999998
Q ss_pred Hhhhcc---C------------------------------CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 004437 245 IHDASL---E------------------------------ESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWD 291 (753)
Q Consensus 245 ~~~~~~---~------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (753)
+..... + ..+||+|+++++++.+++.++++++++++++... .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~-- 304 (1053)
T TIGR01523 230 LQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---D-- 304 (1053)
T ss_pred HhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---h--
Confidence 854321 0 1249999999999999888887777776654221 0
Q ss_pred ccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCccc
Q 004437 292 VVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTL 371 (753)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTL 371 (753)
+ ....+.++++++++++|++||+.++++++++++||++++++||+++++|+||.+++||+||||||
T Consensus 305 ----~----------~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTL 370 (1053)
T TIGR01523 305 ----V----------DKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTI 370 (1053)
T ss_pred ----h----------hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCcc
Confidence 0 12345568899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEEEEEcCcc-cceeeeeeecCcccCCCCCC---------------------c--------ccCC-CCC-ccHH
Q 004437 372 TTNQMSVTEFFTLGRK-TTISRIFHVEGTTYDPKDGG---------------------I--------VDWP-CYN-MDAN 419 (753)
Q Consensus 372 T~~~~~v~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~---------------------~--------~~~~-~~~-~~~~ 419 (753)
|+|+|+|.+++..+.. +... ..+..|.|..+. . .... ... .+..
T Consensus 371 T~N~M~V~~i~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1053)
T TIGR01523 371 TQGKMIARQIWIPRFGTISID----NSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDL 446 (1053)
T ss_pred ccceEEEEEEEEcCCceEEec----CCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHH
Confidence 9999999999875421 1000 000111111000 0 0000 000 1234
Q ss_pred HHHHHHHHhhccCCeeecC--CCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccccccc
Q 004437 420 LQAMAKICAVCNDAGVYCD--GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTK 497 (753)
Q Consensus 420 ~~~~~~~~~~c~~~~~~~~--~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (753)
+..++.++++||++.+..+ ++.+...|+|+|.||+.++.+.|+......+.. ........+.+............
T Consensus 447 ~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 523 (1053)
T TIGR01523 447 FIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEE---DLLKSNENDQSSLSQHNEKPGSA 523 (1053)
T ss_pred HHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchh---hhhhhcccccccccccccccccc
Confidence 6778899999999876543 233456799999999999998887431100000 00000000000000000001134
Q ss_pred ccceeeeecCCCCCceEEEEEecCCC-eEEEEEcCChHHHHHhcccccccCC-ceeeCCHHHHHHHHHHHHHhhhccceE
Q 004437 498 RSKRVATLEFDRIRKSMSVIVREPTG-HNQLLVKGSVESLLERSSHVQLADG-SVVPLDEPCWQLMLSRHLEMSSKGLRC 575 (753)
Q Consensus 498 ~~~~~~~~~F~s~~k~~sviv~~~~~-~~~~~~KGa~e~il~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~G~rv 575 (753)
.+++++++||+|+||||+++++..++ ++++|+|||||.|+++|+.+...+| ...|++++.++.+.+.+++|+++|+||
T Consensus 524 ~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRv 603 (1053)
T TIGR01523 524 QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRV 603 (1053)
T ss_pred ccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeE
Confidence 57899999999999999999987644 4789999999999999998765554 567899999999999999999999999
Q ss_pred EEEEEeccccc-cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHH
Q 004437 576 LGMAYKDELGE-FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKST 654 (753)
Q Consensus 576 l~~A~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~ 654 (753)
|++|||....+ +... .... ....+..+|+||+|+|+++|+||+|++++++|++|+++||+|+|+|||+..|
T Consensus 604 La~A~r~l~~~~~~~~--~~~~------~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~t 675 (1053)
T TIGR01523 604 LAFASKSFDKADNNDD--QLKN------ETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPET 675 (1053)
T ss_pred EEEEEEECCchhccch--hhhc------cccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHH
Confidence 99999975432 1100 0000 0012345689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC------ccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcC
Q 004437 655 AEAICRQIKLFSGNE------DLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728 (753)
Q Consensus 655 a~~ia~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GD 728 (753)
|.++|+++||..... .....+++|.++..+.++++.+.+.. ..||+|++|+||.++|+.+|+.|+.|+|+||
T Consensus 676 A~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~--~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GD 753 (1053)
T TIGR01523 676 AKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKAL--CLVIARCAPQTKVKMIEALHRRKAFCAMTGD 753 (1053)
T ss_pred HHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhc--CeEEEecCHHHHHHHHHHHHhcCCeeEEeCC
Confidence 999999999975421 11246899999999999888887776 6899999999999999999999999999999
Q ss_pred CcccHHHhhhcCceEecCCCCccCC
Q 004437 729 GVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 729 g~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|.||+|||++||||||||++|+|++
T Consensus 754 GvNDapaLk~AdVGIAmg~~gt~va 778 (1053)
T TIGR01523 754 GVNDSPSLKMANVGIAMGINGSDVA 778 (1053)
T ss_pred CcchHHHHHhCCccEecCCCccHHH
Confidence 9999999999999999998998863
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-110 Score=977.38 Aligned_cols=648 Identities=43% Similarity=0.617 Sum_probs=563.8
Q ss_pred cccccCCHH--HHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcc
Q 004437 6 FPAWSWTVE--QCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFH 83 (753)
Q Consensus 6 ~~~~~~~~~--~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~ 83 (753)
..||..+.+ ++...+.++...||+.+|+.+|++.||+|+++..+..++|+.++.+|.++++++++++++++++++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~ 100 (917)
T COG0474 21 ETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWV 100 (917)
T ss_pred ccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 478999999 999999999999999999999999999999998888999999999999999999999999999887543
Q ss_pred CCCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCC
Q 004437 84 SSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGD 163 (753)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~ 163 (753)
+. . .+.+.++.+++++.+++++||+|+++.+++++++.+.+++|+|||++ ++|++++|||||||.|++||
T Consensus 101 ~~------~---~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~-~~i~a~eLVpGDiV~l~~gd 170 (917)
T COG0474 101 DA------G---VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKF-VEIPASELVPGDIVLLEAGD 170 (917)
T ss_pred cc------C---cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcE-EEecHHHCCCCcEEEECCCC
Confidence 21 0 34556778888899999999999999999999999999999999999 46999999999999999999
Q ss_pred cccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCccccc-ccccEEEeecEEEeeeEEEEEEEEccchhHHHHH
Q 004437 164 KVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQ-AKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQ 242 (753)
Q Consensus 164 ~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~-~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~ 242 (753)
+||||++|+++ .+++||||+|||||.|+.|.+.+....+.... ++.|++|+||.+++|.++++|++||.+|.+|++.
T Consensus 171 ~vPAD~rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia 248 (917)
T COG0474 171 VVPADLRLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIA 248 (917)
T ss_pred ccccceEEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHH
Confidence 99999999985 44799999999999999999876655555555 7899999999999999999999999999999999
Q ss_pred HHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhc
Q 004437 243 KQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAI 322 (753)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~i 322 (753)
+.+... ....+|+++.++++..+++.+++++++++++..+... ..+ +...+..+++++++++
T Consensus 249 ~~~~~~--~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~-----~~~-----------~~~~~~~~v~l~va~I 310 (917)
T COG0474 249 RLLPTK--KEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRG-----GNG-----------LLESFLTALALAVAAV 310 (917)
T ss_pred Hhhccc--cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----Ccc-----------HHHHHHHHHHHHHhcc
Confidence 998754 3678999999999999999999888888887753110 011 2457888999999999
Q ss_pred cCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccC
Q 004437 323 PEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYD 402 (753)
Q Consensus 323 P~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 402 (753)
|++||+.++++++.++.+|+++++++|+++++|+||++++||+|||||||+|+|+|.+++..+.. ...+
T Consensus 311 PegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~-----------~~~~ 379 (917)
T COG0474 311 PEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG-----------KDID 379 (917)
T ss_pred ccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCc-----------cccc
Confidence 99999999999999999999999999999999999999999999999999999999999987410 0000
Q ss_pred CCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcc
Q 004437 403 PKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLI 482 (753)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 482 (753)
+ ......+....++..+++||++..... + ++..|||+|.||++++++.|+.. ... .
T Consensus 380 ~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~-~~~~gdptE~Al~~~a~~~~~~~-~~~------~------- 435 (917)
T COG0474 380 D--------KDLKDSPALLRFLLAAALCNSVTPEKN-G-WYQAGDPTEGALVEFAEKLGFSL-DLS------G------- 435 (917)
T ss_pred c--------cccccchHHHHHHHHHHhcCccccccc-C-ceecCCccHHHHHHHHHhcCCcC-CHH------H-------
Confidence 0 001112345578889999999887766 4 78899999999999999988743 100 0
Q ss_pred cccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHH
Q 004437 483 DSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLML 562 (753)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~ 562 (753)
....+++++++||+|.|||||++++..++++++++|||||.|+++|+.. +...+++++.++.++
T Consensus 436 ------------~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~ 499 (917)
T COG0474 436 ------------LEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTLE 499 (917)
T ss_pred ------------HhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHHH
Confidence 1445688999999999999999999777779999999999999999986 667789999999999
Q ss_pred HHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC
Q 004437 563 SRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI 642 (753)
Q Consensus 563 ~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi 642 (753)
...++|+++||||+++|||..+..... ... ...|+||+|+|+++|+||+|+++++||+.|+++||
T Consensus 500 ~~~~~la~~glRvla~A~k~~~~~~~~--------------~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI 564 (917)
T COG0474 500 EAVKELASEGLRVLAVAYKKLDRAEKD--------------DEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGI 564 (917)
T ss_pred HHHHHHHHHHHHHHHHHhccCCccccc--------------chh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCC
Confidence 999999999999999999953321100 001 46789999999999999999999999999999999
Q ss_pred eEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCe
Q 004437 643 EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEV 722 (753)
Q Consensus 643 ~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~ 722 (753)
+|||+|||+..||.+||++||+...... ..+++|.++..+.++++.+.+.++ .||||++|+||.++|+.+|+.|+.
T Consensus 565 ~v~MiTGD~~~TA~aIa~~~Gi~~~~~~--~~vi~G~el~~l~~~el~~~~~~~--~VfARvsP~qK~~IV~~lq~~g~v 640 (917)
T COG0474 565 KVWMITGDHVETAIAIAKECGIEAEAES--ALVIDGAELDALSDEELAELVEEL--SVFARVSPEQKARIVEALQKSGHV 640 (917)
T ss_pred cEEEECCCCHHHHHHHHHHcCCCCCCCc--eeEeehHHhhhcCHHHHHHHhhhC--cEEEEcCHHHHHHHHHHHHhCCCE
Confidence 9999999999999999999998764432 458999999999999999999995 499999999999999999999999
Q ss_pred EEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 723 VAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 723 v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|+|+|||.||+||||+||||||||.+|+|++
T Consensus 641 VamtGDGvNDapALk~ADVGIamg~~Gtdaa 671 (917)
T COG0474 641 VAMTGDGVNDAPALKAADVGIAMGGEGTDAA 671 (917)
T ss_pred EEEeCCCchhHHHHHhcCccEEecccHHHHH
Confidence 9999999999999999999999998898864
No 5
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.3e-106 Score=959.55 Aligned_cols=675 Identities=30% Similarity=0.456 Sum_probs=557.1
Q ss_pred CCcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcc
Q 004437 4 KPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFH 83 (753)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~ 83 (753)
....||.++++++++.|+|++.+|||++|+++|+++||+|+++.++++++|+.++++|.++++++++++++++++...+.
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 34589999999999999999999999999999999999999998888999999999999999999999999988765443
Q ss_pred CCCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCC
Q 004437 84 SSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGD 163 (753)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~ 163 (753)
...+.......|+++++++++++++.++++++++|+++.+++++++.+.+++|+|||++ ++|++++|||||+|.|++||
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~-~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK-MSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEeeHHHCCCCCEEEECCCC
Confidence 21111112236888999999999999999999999999999999998999999999999 56999999999999999999
Q ss_pred cccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHH
Q 004437 164 KVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQK 243 (753)
Q Consensus 164 ~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~ 243 (753)
+|||||+++++ +.+.||||+|||||.|+.|.+... .....+..|++|+||.+++|++.++|++||.+|.+|++.+
T Consensus 172 ~IPaD~~il~~--~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~ 246 (997)
T TIGR01106 172 RIPADLRIISA--QGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIAS 246 (997)
T ss_pred EEeeeEEEEEc--cCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHh
Confidence 99999999984 569999999999999999976421 1223466899999999999999999999999999999999
Q ss_pred HHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhcc
Q 004437 244 QIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIP 323 (753)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP 323 (753)
.+..+ +.+++|+++.++++..+++.++++++++++++.+.. . .. +...+.+++++++++||
T Consensus 247 ~~~~~--~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~-----------~~~~~~~~i~v~v~~iP 307 (997)
T TIGR01106 247 LASGL--ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL--G----YT-----------WLEAVIFLIGIIVANVP 307 (997)
T ss_pred hhhhc--ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c----CC-----------HHHHHHHHHHHHhhcCC
Confidence 88654 556899999999999999888877777666553211 0 01 13456678889999999
Q ss_pred CChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCC
Q 004437 324 EGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDP 403 (753)
Q Consensus 324 ~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 403 (753)
|+||++++++++.++++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+... . .+++
T Consensus 308 ~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~-~~~~ 380 (997)
T TIGR01106 308 EGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEAD------T-TEDQ 380 (997)
T ss_pred ccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecC------C-ccCC
Confidence 99999999999999999999999999999999999999999999999999999999999765432110 0 0111
Q ss_pred CCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCC-----cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhh
Q 004437 404 KDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGP-----LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAA 478 (753)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~ 478 (753)
. +... .......+.++.++++||++.+..+.. .....|+|+|.||++++.+.+.....
T Consensus 381 ~-~~~~----~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~------------ 443 (997)
T TIGR01106 381 S-GVSF----DKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME------------ 443 (997)
T ss_pred C-CccC----CcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH------------
Confidence 0 0000 011234557888999999876543321 13457899999999998754322110
Q ss_pred hhcccccccccccccccccccceeeeecCCCCCceEEEEEecC---CCeEEEEEcCChHHHHHhcccccccCCceeeCCH
Q 004437 479 NYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP---TGHNQLLVKGSVESLLERSSHVQLADGSVVPLDE 555 (753)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~---~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~ 555 (753)
.+..+++++.+||+|+||||++++... ++.+++|+|||||.|+++|+.+. .+|...++++
T Consensus 444 ----------------~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~ 506 (997)
T TIGR01106 444 ----------------MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDE 506 (997)
T ss_pred ----------------HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCH
Confidence 045677889999999999999988643 24678999999999999999876 5788889999
Q ss_pred HHHHHHHHHHHHhhhccceEEEEEEeccccc-cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHH
Q 004437 556 PCWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAI 634 (753)
Q Consensus 556 ~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i 634 (753)
+.++.+.+.+++|+++|+||+++|||....+ +.... .. +.......|+||+|+|+++++||+|++++++|
T Consensus 507 ~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~-~~--------~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI 577 (997)
T TIGR01106 507 ELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGF-QF--------DTDDVNFPTDNLCFVGLISMIDPPRAAVPDAV 577 (997)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccc-cc--------cchhhhccccCcEEEEEEeccCCChHHHHHHH
Confidence 9999999999999999999999999975432 11100 00 00111234889999999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc--------------------cccccccchhhhccCHHHHHHHHH
Q 004437 635 DDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED--------------------LTGRSFTGKEFMALSSTQQIEALS 694 (753)
Q Consensus 635 ~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~ 694 (753)
++|+++||+|+|+|||+..+|.++|+++|+..+... -...+++|.++..+.++++.+.+.
T Consensus 578 ~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~ 657 (997)
T TIGR01106 578 GKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILK 657 (997)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHH
Confidence 999999999999999999999999999999754321 012589999999999999999888
Q ss_pred hcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 695 KHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 695 ~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
++...||||++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||||++|+|++
T Consensus 658 ~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~va 716 (997)
T TIGR01106 658 YHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 716 (997)
T ss_pred hcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHH
Confidence 86667999999999999999999999999999999999999999999999998898863
No 6
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.2e-104 Score=929.62 Aligned_cols=616 Identities=29% Similarity=0.468 Sum_probs=529.8
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (753)
..+..+++++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|++|++++++++++++++.+
T Consensus 48 ~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------ 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------ 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc------
Confidence 346789999999999986 6999999999999999999999888999999999999999999999999988764
Q ss_pred CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeC------CeeeeeecCCCCCCCcEEEec
Q 004437 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRD------GYLVPDLPAIGLVPGDIVELG 160 (753)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~------g~~~~~i~~~~Lv~GDII~l~ 160 (753)
.|.++++++++++++.++++++|+|+++.+++|+++.+.+++|+|| |++ ++|++++|||||||.|+
T Consensus 121 -------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~-~~I~~~eLvpGDiV~l~ 192 (902)
T PRK10517 121 -------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGW-LEIPIDQLVPGDIIKLA 192 (902)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeE-EEEEHHhCCCCCEEEEC
Confidence 5778899999999999999999999999999999999999999999 567 57999999999999999
Q ss_pred CCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHH
Q 004437 161 VGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240 (753)
Q Consensus 161 ~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~ 240 (753)
+||.|||||+|+++ .++.||||+|||||.|+.|.+......+....+.+|++|+||.|.+|.+.++|++||.+|.+|+
T Consensus 193 ~Gd~IPaDg~li~g--~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~Gk 270 (902)
T PRK10517 193 AGDMIPADLRILQA--RDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQ 270 (902)
T ss_pred CCCEEeeeEEEEEc--CceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHH
Confidence 99999999999983 5689999999999999999876443334455677899999999999999999999999999999
Q ss_pred HHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHH
Q 004437 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVA 320 (753)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~ 320 (753)
+.+.++++ ...++|+++.+++++.+++.++++++.+++++.... ..+ +...+.++++++++
T Consensus 271 I~~~v~~~--~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~------~~~-----------~~~~l~~alsv~V~ 331 (902)
T PRK10517 271 LAGRVSEQ--DSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT------KGD-----------WWEAALFALSVAVG 331 (902)
T ss_pred HHHHhhcc--CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh------cCC-----------HHHHHHHHHHHHHH
Confidence 99998765 567899999999999998888877777665553211 011 23467788999999
Q ss_pred hccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcc
Q 004437 321 AIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTT 400 (753)
Q Consensus 321 ~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 400 (753)
+|||+||++++++++.++.+|+|+|++||+++++|+||++|+||||||||||+|+|+|.++.....
T Consensus 332 ~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~-------------- 397 (902)
T PRK10517 332 LTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG-------------- 397 (902)
T ss_pred HcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999987632100
Q ss_pred cCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhh
Q 004437 401 YDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (753)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 480 (753)
. ..++++..+++|.... ...+||+|.|++.+++..+...
T Consensus 398 ~-----------------~~~~ll~~a~l~~~~~--------~~~~~p~d~All~~a~~~~~~~---------------- 436 (902)
T PRK10517 398 K-----------------TSERVLHSAWLNSHYQ--------TGLKNLLDTAVLEGVDEESARS---------------- 436 (902)
T ss_pred C-----------------CHHHHHHHHHhcCCcC--------CCCCCHHHHHHHHHHHhcchhh----------------
Confidence 0 0133444455543211 1257999999999876422000
Q ss_pred cccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHH
Q 004437 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQL 560 (753)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~ 560 (753)
....+..+.++||++.+|+|+++++..++.+.+++||+||.++++|+.+. .++...|++++.++.
T Consensus 437 --------------~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~ 501 (902)
T PRK10517 437 --------------LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRR 501 (902)
T ss_pred --------------hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHH
Confidence 02356678899999999999999987777788999999999999999875 456678999998999
Q ss_pred HHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhC
Q 004437 561 MLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGA 640 (753)
Q Consensus 561 ~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~ 640 (753)
+.+..++++++|+||+++|||+...+...+ ....|+|++|+|+++|+||+|++++++|++|+++
T Consensus 502 i~~~~~~~a~~G~rvlavA~k~~~~~~~~~----------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~a 565 (902)
T PRK10517 502 IKRVTDTLNRQGLRVVAVATKYLPAREGDY----------------QRADESDLILEGYIAFLDPPKETTAPALKALKAS 565 (902)
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCcccccc----------------ccccccCceeeehHhhhCcchhhHHHHHHHHHHC
Confidence 999999999999999999999743211000 0113689999999999999999999999999999
Q ss_pred CCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcC
Q 004437 641 GIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720 (753)
Q Consensus 641 gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 720 (753)
||+|+|+|||+..+|.++|+++||.. ..+++|.+++.+.++++.+.+.+ ..+|+|++|+||.++|+.+|++|
T Consensus 566 GI~v~miTGD~~~tA~~IA~~lGI~~------~~v~~G~el~~l~~~el~~~~~~--~~VfAr~sPe~K~~IV~~Lq~~G 637 (902)
T PRK10517 566 GVTVKILTGDSELVAAKVCHEVGLDA------GEVLIGSDIETLSDDELANLAER--TTLFARLTPMHKERIVTLLKREG 637 (902)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCc------cCceeHHHHHhCCHHHHHHHHhh--CcEEEEcCHHHHHHHHHHHHHCC
Confidence 99999999999999999999999952 35889999999999999998888 67999999999999999999999
Q ss_pred CeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 721 ~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 638 ~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvA 669 (902)
T PRK10517 638 HVVGFMGDGINDAPALRAADIGISVD-GAVDIA 669 (902)
T ss_pred CEEEEECCCcchHHHHHhCCEEEEeC-CcCHHH
Confidence 99999999999999999999999999 999874
No 7
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=7.3e-104 Score=936.17 Aligned_cols=654 Identities=32% Similarity=0.458 Sum_probs=539.2
Q ss_pred CHHHHHHHhCCCCCCCCC--HHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCC
Q 004437 12 TVEQCLKEYNVKLDKGLS--SREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGD 89 (753)
Q Consensus 12 ~~~~~~~~l~~~~~~GL~--~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (753)
+++++++.|+|+.++||| ++|+++|+++||+|+++.++++++|++++++|+++++++++++++++++++++.+.....
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999999999999 999999999999999999988999999999999999999999999999987553211122
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhh-cccccEEEeCCeeeeeecCCCCCCCcEEEecCCCccccc
Q 004437 90 SGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI-QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPAD 168 (753)
Q Consensus 90 ~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD 168 (753)
.+...|+++++++++++++.+++.++++++++.++++++. .+.+++|+|||++ ++|++++|||||||.|++||+||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~-~~I~~~~Lv~GDiV~l~~Gd~IPaD 201 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQE-QQISIHDIVVGDIVSLSTGDVVPAD 201 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEE-EEEeHHHCCCCCEEEECCCCEeccc
Confidence 3345789999999999999999999999999999999864 4678999999999 5699999999999999999999999
Q ss_pred EEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhh
Q 004437 169 MRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (753)
Q Consensus 169 ~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~ 248 (753)
|+|+++ +.+.||||+|||||.|+.|.+. ..|++|+||.+.+|.+.++|++||.+|.+|++.+.+..+
T Consensus 202 ~~li~g--~~l~VdES~LTGES~pv~K~~~-----------~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~ 268 (941)
T TIGR01517 202 GVFISG--LSLEIDESSITGESDPIKKGAP-----------KDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAE 268 (941)
T ss_pred EEEEEc--CcEEEEecccCCCCCcccccCC-----------CCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccC
Confidence 999983 4899999999999999999862 257999999999999999999999999999999988654
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhH
Q 004437 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPA 328 (753)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~ 328 (753)
..++|+++.++++..++..++++++++++++.+..+.......+... .......+...+..++++++++|||+||+
T Consensus 269 ---~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~al~llv~~iP~~Lp~ 344 (941)
T TIGR01517 269 ---GEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRD-TEEDAQTFLDHFIIAVTIVVVAVPEGLPL 344 (941)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc-cchhhHHHHHHHHHHHHHHHhhCCCchHH
Confidence 35679999999999999888777766655543211110000000000 00011234567888999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCc
Q 004437 329 VITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGI 408 (753)
Q Consensus 329 ~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (753)
+++++++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+... . .
T Consensus 345 ~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~--~------- 409 (941)
T TIGR01517 345 AVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVR------D--V------- 409 (941)
T ss_pred HHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecC------c--c-------
Confidence 999999999999999999999999999999999999999999999999999988654221100 0 0
Q ss_pred ccCCCCCccHHHHHHHHHHhhccCCeeec-C-CCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccc
Q 004437 409 VDWPCYNMDANLQAMAKICAVCNDAGVYC-D-GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSST 486 (753)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~-~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (753)
. ...+.....++..++.||+..... + ....+..|+|+|.|+++++.+.|......
T Consensus 410 ~----~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~------------------- 466 (941)
T TIGR01517 410 L----RNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEV------------------- 466 (941)
T ss_pred c----ccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHH-------------------
Confidence 0 001122344555555565543321 1 12235678999999999998766432110
Q ss_pred cccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHH
Q 004437 487 VRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHL 566 (753)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~ 566 (753)
+..+++++.+||+|++|+|+++++..++++++++|||||.++++|+.+...+|...|+++ .++.+.+.++
T Consensus 467 ---------~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~ 536 (941)
T TIGR01517 467 ---------RAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIE 536 (941)
T ss_pred ---------HhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHH
Confidence 234567788999999999999999777778999999999999999987666777788887 7888999999
Q ss_pred HhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEE
Q 004437 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMV 646 (753)
Q Consensus 567 ~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i 646 (753)
+|+++|+||+++|||....+. +. .....|+||+|+|+++|+||+|++++++|++|+++||+++|
T Consensus 537 ~~a~~G~Rvl~~A~~~~~~~~--~~--------------~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~m 600 (941)
T TIGR01517 537 PLASDALRTICLAYRDFAPEE--FP--------------RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRM 600 (941)
T ss_pred HHHhcCCEEEEEEEEecCccc--cc--------------cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEE
Confidence 999999999999999743210 00 01123789999999999999999999999999999999999
Q ss_pred EcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEE
Q 004437 647 ITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMT 726 (753)
Q Consensus 647 ~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~ 726 (753)
+|||+..||.++|+++||.... ..+++|+++..+.++++.+.+.+ ..||+|++|+||.++|+.+|+.|+.|+|+
T Consensus 601 iTGD~~~tA~~iA~~~GI~~~~----~~vi~G~~~~~l~~~el~~~i~~--~~Vfar~sPe~K~~iV~~lq~~g~vVam~ 674 (941)
T TIGR01517 601 VTGDNIDTAKAIARNCGILTFG----GLAMEGKEFRRLVYEEMDPILPK--LRVLARSSPLDKQLLVLMLKDMGEVVAVT 674 (941)
T ss_pred ECCCChHHHHHHHHHcCCCCCC----ceEeeHHHhhhCCHHHHHHHhcc--CeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999997644 25899999999999999888887 68999999999999999999999999999
Q ss_pred cCCcccHHHhhhcCceEecCCCCccCC
Q 004437 727 GDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 727 GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|||.||+|||++||||||||++|+|++
T Consensus 675 GDGvNDapALk~AdVGIAmg~~gtdvA 701 (941)
T TIGR01517 675 GDGTNDAPALKLADVGFSMGISGTEVA 701 (941)
T ss_pred CCCCchHHHHHhCCcceecCCCccHHH
Confidence 999999999999999999999999864
No 8
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.7e-103 Score=927.42 Aligned_cols=640 Identities=39% Similarity=0.604 Sum_probs=544.5
Q ss_pred ccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCccCCCCCccHHHHHHHHh-hhhHHHHHHHHHHHHHHHhhccC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLS-SREVEKRRERYGWNELDKEKGKPLWQLVLEQF-DDTLVKILLVAAFISFILAYFHS 84 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~-~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f-~~~~~~~~~~~~~~~~~~~~~~~ 84 (753)
+||.++++++++.|+|++.+||| ++|+++|+++||+|+++.++++++|+.++++| ++|++++++++++++++++
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 68999999999999999999999 89999999999999999988899999999999 9999999999999998775
Q ss_pred CCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCc
Q 004437 85 SDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDK 164 (753)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~ 164 (753)
.|.++++++++++++.++++++|+|+++.+++|+++.+.+++|+|||++ ++|++++|||||||.|++||.
T Consensus 79 ---------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~-~~I~~~eLv~GDiv~l~~Gd~ 148 (884)
T TIGR01522 79 ---------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKL-EHVLASTLVPGDLVCLSVGDR 148 (884)
T ss_pred ---------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEEEHHHCccCCEEEecCCCE
Confidence 4777888888888889999999999999999999999999999999999 579999999999999999999
Q ss_pred ccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCC-cccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHH
Q 004437 165 VPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLD-DCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQK 243 (753)
Q Consensus 165 iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~-~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~ 243 (753)
|||||+|+++ .++.||||+|||||.|+.|.+.+.... +....+++|++|+||.+.+|.+.++|++||.+|.+|++.+
T Consensus 149 IPaDg~ii~g--~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~ 226 (884)
T TIGR01522 149 VPADLRIVEA--VDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFK 226 (884)
T ss_pred EeeeEEEEEc--CceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHH
Confidence 9999999983 469999999999999999987532211 2334567899999999999999999999999999999999
Q ss_pred HHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhcc
Q 004437 244 QIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIP 323 (753)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP 323 (753)
.++++ ...++|+++.+++++.++.+++++++++++++.+ +. ..+ +...+.+++++++++||
T Consensus 227 ~v~~~--~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~--~~----~~~-----------~~~~~~~~v~llv~aiP 287 (884)
T TIGR01522 227 MMQAI--EKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW--FQ----GKD-----------WLEMFTISVSLAVAAIP 287 (884)
T ss_pred HhccC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh----cCC-----------HHHHHHHHHHHHHHHcc
Confidence 88765 5668999999999999988776655554444322 11 111 23467788999999999
Q ss_pred CChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCC
Q 004437 324 EGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDP 403 (753)
Q Consensus 324 ~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 403 (753)
|+||++++++++.+++||+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+.. .+...+++
T Consensus 288 ~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~-----~~~~~~~~ 362 (884)
T TIGR01522 288 EGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM-----LNAVSLNQ 362 (884)
T ss_pred chHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEee-----ccCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999875532110 00111111
Q ss_pred CCCCcc-c--CCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhh
Q 004437 404 KDGGIV-D--WPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (753)
Q Consensus 404 ~~~~~~-~--~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 480 (753)
. +... + ......++....++.++++||++.....+. ...|+|+|.|++.++.+.|+...
T Consensus 363 ~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--~~~g~p~e~All~~~~~~~~~~~--------------- 424 (884)
T TIGR01522 363 F-GEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEAD--TLLGNPTDVALIELLMKFGLDDL--------------- 424 (884)
T ss_pred C-CcccccccccccccCHHHHHHHHHHhhhCCCeecCCCC--CcCCChHHHHHHHHHHHcCcHhH---------------
Confidence 1 0000 0 000111234567888899999876543322 23589999999999987665310
Q ss_pred cccccccccccccccccccceeeeecCCCCCceEEEEEecC-CCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHH
Q 004437 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP-TGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQ 559 (753)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~ 559 (753)
+..++.++++||+|.||||+++++.. ++++++|+||+||.++.+|+.+...+|...+++++.++
T Consensus 425 ---------------~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~ 489 (884)
T TIGR01522 425 ---------------RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRD 489 (884)
T ss_pred ---------------HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHH
Confidence 23466789999999999999998763 46788999999999999999887777888889999999
Q ss_pred HHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHh
Q 004437 560 LMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRG 639 (753)
Q Consensus 560 ~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~ 639 (753)
.+.+.+++++++|+||+++|||.. +.+|+|+|+++++||+|++++++|++|++
T Consensus 490 ~i~~~~~~~a~~G~rvl~~A~~~~---------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~ 542 (884)
T TIGR01522 490 VIQEEAAEMASAGLRVIAFASGPE---------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLIT 542 (884)
T ss_pred HHHHHHHHHHhcCCEEEEEEEEcC---------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHH
Confidence 999999999999999999999752 35799999999999999999999999999
Q ss_pred CCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHc
Q 004437 640 AGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM 719 (753)
Q Consensus 640 ~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 719 (753)
+|++++|+|||+..+|.++|+++||.... ..+++|+++..+.++++.+.+.+ ..+|+|++|+||..+|+.+|+.
T Consensus 543 ~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~----~~~v~g~~l~~~~~~~l~~~~~~--~~Vfar~~P~~K~~iv~~lq~~ 616 (884)
T TIGR01522 543 GGVRIIMITGDSQETAVSIARRLGMPSKT----SQSVSGEKLDAMDDQQLSQIVPK--VAVFARASPEHKMKIVKALQKR 616 (884)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCC----CceeEhHHhHhCCHHHHHHHhhc--CeEEEECCHHHHHHHHHHHHHC
Confidence 99999999999999999999999997543 24679999999999998888887 6899999999999999999999
Q ss_pred CCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 720 GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 720 ~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
|+.|+|+|||.||+|||++||||||||.+|+|+
T Consensus 617 g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v 649 (884)
T TIGR01522 617 GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV 649 (884)
T ss_pred CCEEEEECCCcccHHHHHhCCeeEecCCCcCHH
Confidence 999999999999999999999999999778775
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.2e-103 Score=922.78 Aligned_cols=628 Identities=30% Similarity=0.483 Sum_probs=531.2
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (753)
..|..+++++++.|+++ .+|||++|+++|+++||+|+++.++++++|+.+++||+++++++++++++++++++++....
T Consensus 26 ~~~~~~~~~v~~~l~~~-~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 26 REAANSLEETLANLNTH-RQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHhCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45888999999999999 48999999999999999999999888999999999999999999999999999987653210
Q ss_pred CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCC------eeeeeecCCCCCCCcEEEec
Q 004437 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDG------YLVPDLPAIGLVPGDIVELG 160 (753)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g------~~~~~i~~~~Lv~GDII~l~ 160 (753)
......|.++++|+++++++.++++++|+|+++++++|+++.+.+++|+||| ++ ++|++++|||||+|.|+
T Consensus 105 --~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~-~~I~~~eLv~GDiV~l~ 181 (903)
T PRK15122 105 --RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVR-REIPMRELVPGDIVHLS 181 (903)
T ss_pred --CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeE-EEEEHHHCCCCCEEEEC
Confidence 0111368899999999999999999999999999999999999999999995 66 57999999999999999
Q ss_pred CCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCC----------CcCCcccccccccEEEeecEEEeeeEEEEEE
Q 004437 161 VGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSP----------VFLDDCELQAKENMVFAGTTVVNGSCVCIVI 230 (753)
Q Consensus 161 ~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~----------~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~ 230 (753)
+||.|||||+|+++ +.+.||||+|||||.|+.|.+.+ ...++.+..+.+|++|+||.+.+|.++++|+
T Consensus 182 ~Gd~IPaDg~li~g--~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~ 259 (903)
T PRK15122 182 AGDMIPADVRLIES--RDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVV 259 (903)
T ss_pred CCCEEeeeEEEEEc--CceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEE
Confidence 99999999999984 56899999999999999998621 1112344556789999999999999999999
Q ss_pred EEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHH
Q 004437 231 NTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYY 310 (753)
Q Consensus 231 ~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (753)
+||.+|.+|++.+.+.+ ...++|+++.++++..++..++++++.+++++.... . ..+...
T Consensus 260 atG~~T~~gkI~~~v~~---~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~------~-----------~~~~~~ 319 (903)
T PRK15122 260 ATGSRTYFGSLAKSIVG---TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT------K-----------GDWLEA 319 (903)
T ss_pred EeccccHhhHHHHHhcC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc------c-----------CCHHHH
Confidence 99999999999998865 456789999999999888777766665554442210 0 122446
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccce
Q 004437 311 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTI 390 (753)
Q Consensus 311 l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~ 390 (753)
+.+++++++++|||+||++++++++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 320 l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~---- 395 (903)
T PRK15122 320 LLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG---- 395 (903)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC----
Confidence 7788999999999999999999999999999999999999999999999999999999999999999998763221
Q ss_pred eeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcc
Q 004437 391 SRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNK 470 (753)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~ 470 (753)
.. + .+++..+++|... . ...+||+|.|++.++.+.+....
T Consensus 396 ----------~~--------------~---~~~l~~a~l~s~~----~----~~~~~p~e~All~~a~~~~~~~~----- 435 (903)
T PRK15122 396 ----------RK--------------D---ERVLQLAWLNSFH----Q----SGMKNLMDQAVVAFAEGNPEIVK----- 435 (903)
T ss_pred ----------CC--------------h---HHHHHHHHHhCCC----C----CCCCChHHHHHHHHHHHcCchhh-----
Confidence 00 0 1233333333210 0 23579999999999877553210
Q ss_pred cchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCce
Q 004437 471 ISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSV 550 (753)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~ 550 (753)
...++.+.++||++.+|+|+++++..++++++++||+||.++++|++.. .+|..
T Consensus 436 -------------------------~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~ 489 (903)
T PRK15122 436 -------------------------PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTV 489 (903)
T ss_pred -------------------------hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh-cCCCe
Confidence 2345678899999999999999987677889999999999999999765 46777
Q ss_pred eeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchh
Q 004437 551 VPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGV 630 (753)
Q Consensus 551 ~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~ 630 (753)
.+++++.++++.+..++++++|+||+++|||....+... .......|+|++|+|+++|+||+|+++
T Consensus 490 ~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~--------------~~~~~~~e~~l~~lGli~l~Dp~R~~a 555 (903)
T PRK15122 490 RPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESR--------------AQYSTADERDLVIRGFLTFLDPPKESA 555 (903)
T ss_pred ecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccc--------------cccccccccCcEEEEEEeccCccHHHH
Confidence 899999999999999999999999999999974321100 001123478999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHH
Q 004437 631 DKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQ 710 (753)
Q Consensus 631 ~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 710 (753)
+++|++|+++||+|+|+|||+..+|.++|+++||.. ..+++|.++..+.++++.+.+.+ ..||+|++|+||.
T Consensus 556 ~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~~--~~VfAr~sPe~K~ 627 (903)
T PRK15122 556 APAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVEE--RTVFAKLTPLQKS 627 (903)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhhh--CCEEEEeCHHHHH
Confidence 999999999999999999999999999999999953 35789999999999999998888 6799999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 711 EIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 711 ~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
++|+.||++|+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvA 669 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIA 669 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHH
Confidence 999999999999999999999999999999999999 999874
No 10
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=4.1e-103 Score=918.04 Aligned_cols=615 Identities=30% Similarity=0.468 Sum_probs=527.8
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (753)
..|.++.+++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|++|++++++++++++++.+
T Consensus 14 ~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 458899999999999985 7999999999999999999999888899999999999999999999999998764
Q ss_pred CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEe------CCeeeeeecCCCCCCCcEEEec
Q 004437 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLR------DGYLVPDLPAIGLVPGDIVELG 160 (753)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R------~g~~~~~i~~~~Lv~GDII~l~ 160 (753)
.|+++++++++++++.++++++|+|+++++++|+++.+.+++|+| ||++ ++|++++|||||||.|+
T Consensus 87 -------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~-~~I~~~eLv~GDiV~l~ 158 (867)
T TIGR01524 87 -------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSM-DEVPIDALVPGDLIELA 158 (867)
T ss_pred -------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeE-EEEEhhcCCCCCEEEEC
Confidence 577888999999999999999999999999999999999999999 8998 56999999999999999
Q ss_pred CCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHH
Q 004437 161 VGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240 (753)
Q Consensus 161 ~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~ 240 (753)
+||+|||||+|+++ .++.||||+|||||.|+.|.+......+.+..+.+|++|+||.+.+|.++++|++||.+|.+|+
T Consensus 159 ~Gd~VPaDg~li~g--~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gk 236 (867)
T TIGR01524 159 AGDIIPADARVISA--RDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGS 236 (867)
T ss_pred CCCEEcccEEEEec--CceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHH
Confidence 99999999999983 4689999999999999999875433344556677899999999999999999999999999999
Q ss_pred HHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHH
Q 004437 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVA 320 (753)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~ 320 (753)
+.+.+.+ ...++|+++.+++++.++..++++++++++++... . .. .+...+.++++++++
T Consensus 237 i~~~v~~---~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~--~----~~-----------~~~~~~~~al~l~v~ 296 (867)
T TIGR01524 237 LAIAATE---RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL--M----KG-----------DWLEAFLFALAVAVG 296 (867)
T ss_pred HHHHhhC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH--h----cC-----------CHHHHHHHHHHHHHH
Confidence 9998865 34578999999999999988887777666544221 0 01 123467788999999
Q ss_pred hccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcc
Q 004437 321 AIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTT 400 (753)
Q Consensus 321 ~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 400 (753)
+|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 297 ~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-------------- 362 (867)
T TIGR01524 297 LTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-------------- 362 (867)
T ss_pred hCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999998752110
Q ss_pred cCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhh
Q 004437 401 YDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (753)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 480 (753)
. ...+++.++++|+... ...+||+|.|++.++.+.....
T Consensus 363 ~-----------------~~~~~l~~a~l~~~~~--------~~~~~p~~~Al~~~~~~~~~~~---------------- 401 (867)
T TIGR01524 363 E-----------------TSERVLKMAWLNSYFQ--------TGWKNVLDHAVLAKLDESAARQ---------------- 401 (867)
T ss_pred C-----------------CHHHHHHHHHHhCCCC--------CCCCChHHHHHHHHHHhhchhh----------------
Confidence 0 0123444444443211 1246999999999876421100
Q ss_pred cccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHH
Q 004437 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQL 560 (753)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~ 560 (753)
....++.+.++||+|.+|+|+++++..++.+++++||+||.++++|+++. .++...+++++.++.
T Consensus 402 --------------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~ 466 (867)
T TIGR01524 402 --------------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSE 466 (867)
T ss_pred --------------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHH
Confidence 02356678899999999999999987666678999999999999999774 467778899998999
Q ss_pred HHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhC
Q 004437 561 MLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGA 640 (753)
Q Consensus 561 ~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~ 640 (753)
+.+.+++++++|+||+++|||....+..++ ....|++|+|+|+++|+||+|++++++|++|+++
T Consensus 467 i~~~~~~~a~~G~rvlavA~~~~~~~~~~~----------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~a 530 (867)
T TIGR01524 467 LQDMTAEMNRQGIRVIAVATKTLKVGEADF----------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKN 530 (867)
T ss_pred HHHHHHHHHhcCCEEEEEEEeccCcccccc----------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHC
Confidence 999999999999999999999743211000 0112679999999999999999999999999999
Q ss_pred CCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcC
Q 004437 641 GIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720 (753)
Q Consensus 641 gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 720 (753)
||+|+|+|||+..+|.++|+++||.. ..+++|.++..+.++++.+.+.+ ..+|+|++|+||.++|+.+|++|
T Consensus 531 GI~vvmiTGD~~~tA~aIA~~lGI~~------~~v~~g~~l~~~~~~el~~~~~~--~~vfAr~~Pe~K~~iV~~lq~~G 602 (867)
T TIGR01524 531 GINVKVLTGDNEIVTARICQEVGIDA------NDFLLGADIEELSDEELARELRK--YHIFARLTPMQKSRIIGLLKKAG 602 (867)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCC------CCeeecHhhhhCCHHHHHHHhhh--CeEEEECCHHHHHHHHHHHHhCC
Confidence 99999999999999999999999953 24789999999999999888888 68999999999999999999999
Q ss_pred CeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 721 ~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 603 ~vVam~GDGvNDapALk~AdVGIAmg-~gtdvA 634 (867)
T TIGR01524 603 HTVGFLGDGINDAPALRKADVGISVD-TAADIA 634 (867)
T ss_pred CEEEEECCCcccHHHHHhCCEEEEeC-CccHHH
Confidence 99999999999999999999999999 999874
No 11
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.3e-99 Score=894.13 Aligned_cols=657 Identities=56% Similarity=0.864 Sum_probs=531.8
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEE
Q 004437 57 VLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKV 136 (753)
Q Consensus 57 l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V 136 (753)
+++||+++++++++++++++++++++.. +......|+++++|+++++++.++++++|+|+++.+++|+++.+.+++|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~---~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~V 77 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEE---GEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKV 77 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccc---cccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 4789999999999999999999886542 1122347999999999999999999999999999999999999999999
Q ss_pred EeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEe
Q 004437 137 LRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFA 216 (753)
Q Consensus 137 ~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~ 216 (753)
+|||++ ++|++++|||||||.|++||.|||||+|+++ +++.||||+|||||.|+.|.+.....++....+++|++|+
T Consensus 78 iRdg~~-~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~--~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~ 154 (917)
T TIGR01116 78 LRDGRW-SVIKAKDLVPGDIVELAVGDKVPADIRVLSL--KTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFS 154 (917)
T ss_pred EECCEE-EEEEHHHCCCCCEEEECCCCEeeccEEEEEe--cceEEEcccccCCCCcccccccccCccccCcccccceeee
Confidence 999999 5699999999999999999999999999984 5799999999999999999875433333445567899999
Q ss_pred ecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCC
Q 004437 217 GTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW 296 (753)
Q Consensus 217 Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (753)
||.+.+|+++++|++||.+|.+|++.+.+.++ +.+++|+++++++++.+++.+++++++++|++....+.......+|
T Consensus 155 GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~--~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 232 (917)
T TIGR01116 155 GTLVVAGKARGVVVRTGMSTEIGKIRDEMRAA--EQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232 (917)
T ss_pred CCEEecceEEEEEEEeCCCCHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 99999999999999999999999999988665 5678999999999999998888777777766543221111001112
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCce
Q 004437 297 PANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 376 (753)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~ 376 (753)
+..+...+..++++++++||++||+++++++++++++|+++|+++|+++++|+||++|+||||||||||+|+|
T Consensus 233 -------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m 305 (917)
T TIGR01116 233 -------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 305 (917)
T ss_pred -------HHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeE
Confidence 2334456667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCcccceeeeeeecCcccCCCCCCcccCC--CCCccHHHHHHHHHHhhccCCeeecCC--CcceecCCchHHH
Q 004437 377 SVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP--CYNMDANLQAMAKICAVCNDAGVYCDG--PLFRATGLPTEAA 452 (753)
Q Consensus 377 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~c~~~~~~~~~--~~~~~~~~p~e~a 452 (753)
+|.+++..+........+...+..|+|......+.. ....++....++.++++||++.+..++ ..+...|+|+|.|
T Consensus 306 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~A 385 (917)
T TIGR01116 306 SVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAA 385 (917)
T ss_pred EEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHH
Confidence 999999876433222233344444555321111000 001124467788899999998765432 2244579999999
Q ss_pred HHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCC
Q 004437 453 LKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGS 532 (753)
Q Consensus 453 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa 532 (753)
|+.++.+.|+............. ..+.....+..+++++++||+|+||||+++++.. +++++|+|||
T Consensus 386 Ll~~~~~~g~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGA 452 (917)
T TIGR01116 386 LKVLVEKMGLPATKNGVSSKRRP------------ALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGA 452 (917)
T ss_pred HHHHHHHcCCCchhccccccccc------------ccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCC
Confidence 99999998876543321110000 0000001145678899999999999999999864 6689999999
Q ss_pred hHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhh-ccceEEEEEEeccccccccccccCcccccccCCCcccccCC
Q 004437 533 VESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS-KGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIE 611 (753)
Q Consensus 533 ~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 611 (753)
||.|+++|+.+..+||...|++++.++.+.+.+++|++ +|+||+++|||....+..... ..+...++.+|
T Consensus 453 pe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~---------~~~~~~~~~~e 523 (917)
T TIGR01116 453 PEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDL---------LSDPANFEAIE 523 (917)
T ss_pred hHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccc---------cccchhhhhhc
Confidence 99999999988877788899999999999999999999 999999999998543221110 00112335678
Q ss_pred CCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHH
Q 004437 612 SDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIE 691 (753)
Q Consensus 612 ~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (753)
+||+|+|+++++||+|++++++|++|+++|++++|+|||+..+|.++|+++|+..+...+....++|.++..+.+++..+
T Consensus 524 ~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~ 603 (917)
T TIGR01116 524 SDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRA 603 (917)
T ss_pred CCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876555445678999999988887777
Q ss_pred HHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 692 ALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 692 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
...+ ..|++|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 604 ~~~~--~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~a 662 (917)
T TIGR01116 604 ACRS--AVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVA 662 (917)
T ss_pred hhhc--CeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHH
Confidence 6665 6899999999999999999999999999999999999999999999999 998763
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.5e-98 Score=868.98 Aligned_cols=565 Identities=33% Similarity=0.503 Sum_probs=487.0
Q ss_pred CCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHH
Q 004437 27 GLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILV 106 (753)
Q Consensus 27 GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 106 (753)
|||++|+++|+++||+|+++. +++++|+.++++|++|++++++++++++++++ .|.++++++++++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------------~~~~~~~i~~~~~ 66 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------------NWVDFVIILGLLL 66 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------------chhhhhhhhhhhH
Confidence 899999999999999999987 45678899999999999999999999998774 4778888999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccc
Q 004437 107 LNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186 (753)
Q Consensus 107 i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~l 186 (753)
++..+++++|+++++.+++|+++.+++++|+|||++ ++|++++|||||||.|++||+|||||+|+++ .++.||||+|
T Consensus 67 i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~-~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g--~~~~VDeS~L 143 (755)
T TIGR01647 67 LNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKW-QEIPASELVPGDVVRLKIGDIVPADCRLFEG--DYIQVDQAAL 143 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEE-EEEEhhhCcCCCEEEECCCCEEeceEEEEec--CceEEEcccc
Confidence 999999999999999999999999999999999999 5799999999999999999999999999983 3499999999
Q ss_pred cCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHH
Q 004437 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGN 266 (753)
Q Consensus 187 tGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~ 266 (753)
||||.|+.|.+ +|.+|+||.+.+|+++++|++||.+|.+|++.+.++++ +..++|+++.+++++.
T Consensus 144 TGES~PV~K~~-------------~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~--~~~~~~lq~~~~~i~~ 208 (755)
T TIGR01647 144 TGESLPVTKKT-------------GDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQST--ETGSGHLQKILSKIGL 208 (755)
T ss_pred cCCccceEecc-------------CCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhcc--CCCCCcHHHHHHHHHH
Confidence 99999999987 78999999999999999999999999999999998766 5567899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhcccc
Q 004437 267 RLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA 346 (753)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~i 346 (753)
++++++++++++++++++... . ..+...+.+++++++++|||+||++++++++.++++|+|+|+
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~-----~-----------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gi 272 (755)
T TIGR01647 209 FLIVLIGVLVLIELVVLFFGR-----G-----------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKA 272 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----C-----------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCe
Confidence 999888887777766533210 0 112456778899999999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHH
Q 004437 347 IVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKI 426 (753)
Q Consensus 347 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (753)
++|+++++|+||.+|++|||||||||+|+|+|.+++..+.. ++ ..+++..
T Consensus 273 lvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------------~~-----------------~~~~l~~ 322 (755)
T TIGR01647 273 IVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-------------FD-----------------KDDVLLY 322 (755)
T ss_pred EEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC-------------CC-----------------HHHHHHH
Confidence 99999999999999999999999999999999998754210 00 1234555
Q ss_pred HhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeec
Q 004437 427 CAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLE 506 (753)
Q Consensus 427 ~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (753)
+++|++ ...+||+|.|+++++.+.+. . ...++++..+|
T Consensus 323 a~~~~~----------~~~~~pi~~Ai~~~~~~~~~----~----------------------------~~~~~~~~~~p 360 (755)
T TIGR01647 323 AALASR----------EEDQDAIDTAVLGSAKDLKE----A----------------------------RDGYKVLEFVP 360 (755)
T ss_pred HHHhCC----------CCCCChHHHHHHHHHHHhHH----H----------------------------HhcCceEEEec
Confidence 565642 23469999999998764320 0 23456778899
Q ss_pred CCCCCceEEEEEecCC-CeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEecccc
Q 004437 507 FDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELG 585 (753)
Q Consensus 507 F~s~~k~~sviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~ 585 (753)
|++.+|+|+++++..+ |+.++++||+||.++++|+.. .+.++++.+.+++++++|+|++++|||+
T Consensus 361 f~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~--- 426 (755)
T TIGR01647 361 FDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD--- 426 (755)
T ss_pred cCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc---
Confidence 9999999999998654 677889999999999999742 3456778888899999999999999973
Q ss_pred ccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 586 EFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.|++|+|+|+++|+||+|++++++|++|+++||+|+|+|||+..+|.++|+++||.
T Consensus 427 ------------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 427 ------------------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred ------------------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 14689999999999999999999999999999999999999999999999999996
Q ss_pred CCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 666 SGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
... .-.....+|++.+.+.++++.+.+.+ ..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||
T Consensus 483 ~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~--~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 483 TNI-YTADVLLKGDNRDDLPSGELGEMVED--ADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred CCC-cCHHHhcCCcchhhCCHHHHHHHHHh--CCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 421 11112334555567778888888888 579999999999999999999999999999999999999999999999
Q ss_pred CCCCccCC
Q 004437 746 GITGTEVI 753 (753)
Q Consensus 746 gi~g~~~~ 753 (753)
| +|+|++
T Consensus 560 ~-~gtdvA 566 (755)
T TIGR01647 560 A-GATDAA 566 (755)
T ss_pred c-CCcHHH
Confidence 9 999864
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=4.1e-97 Score=886.29 Aligned_cols=624 Identities=24% Similarity=0.328 Sum_probs=485.7
Q ss_pred CCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHH
Q 004437 25 DKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLI 104 (753)
Q Consensus 25 ~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (753)
..||+++|+++|+++||+|+++.+ .+++|++++++|.+|++++++++.+++++.. +|+++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~-------------~~~~~~~i~~i 202 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLDE-------------YYYYSLCIVFM 202 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhh-------------hHHHHHHHHHH
Confidence 479999999999999999999886 4799999999999999988887765554321 57788999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEec--CCCcccccEEEEEeeCCcEEEE
Q 004437 105 LVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELG--VGDKVPADMRVAALKTSSLRVE 182 (753)
Q Consensus 105 ~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~--~G~~iPaD~~vl~~~s~~~~Vd 182 (753)
++++.+++.++++|+.+.++++.. .+..++|+|||+| ++|++++|||||||.|+ +|+.|||||+|++ |++.||
T Consensus 203 ~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~-~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~Vd 277 (1054)
T TIGR01657 203 SSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKW-VTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVN 277 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEE-EEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEe
Confidence 999999999999999888888764 4578999999999 56999999999999999 9999999999997 789999
Q ss_pred cccccCCCCccccCCCCCc-CCc----ccccccccEEEeecEEEe-------eeEEEEEEEEccchhHHHHHHHHhhhcc
Q 004437 183 QSSLTGEAMPILKGTSPVF-LDD----CELQAKENMVFAGTTVVN-------GSCVCIVINTGMNTEIGKIQKQIHDASL 250 (753)
Q Consensus 183 es~ltGEs~pv~K~~~~~~-~~~----~~~~~~~~~l~~Gt~v~~-------g~~~~~V~~tG~~t~~g~~~~~~~~~~~ 250 (753)
||+|||||.|+.|.+.+.. .++ ....+++|++|+||.+++ |.+.++|++||.+|..|++.+.+...
T Consensus 278 ES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~-- 355 (1054)
T TIGR01657 278 ESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP-- 355 (1054)
T ss_pred cccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCC--
Confidence 9999999999999875431 111 123457899999999995 78999999999999999999998765
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHH
Q 004437 251 EESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVI 330 (753)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~ 330 (753)
....+++++...++...+..++++.++++++..+ . .+. .+...+..+++++++++|++||+++
T Consensus 356 ~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~---~-----~~~---------~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 356 KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELI---K-----DGR---------PLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH---H-----cCC---------cHHHHHHHHHHHHHhhcCchHHHHH
Confidence 4567888888777765554444333332222211 0 011 1245677889999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCccc
Q 004437 331 TTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVD 410 (753)
Q Consensus 331 ~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (753)
++++++++.||+|+|++||++.++|.+|++|++|||||||||+|+|+|.+++..+...... ....+.
T Consensus 419 ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~-------~~~~~~------ 485 (1054)
T TIGR01657 419 SIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL-------KIVTED------ 485 (1054)
T ss_pred HHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc-------cccccc------
Confidence 9999999999999999999999999999999999999999999999999998654311000 000000
Q ss_pred CCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccc
Q 004437 411 WPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLG 490 (753)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (753)
.......+..+++.||+..... + ...|||+|.|+++++.. ......+........ ....
T Consensus 486 -----~~~~~~~~~~~~a~C~~~~~~~-~---~~~Gdp~E~al~~~~~~---~~~~~~~~~~~~~~~-------~~i~-- 544 (1054)
T TIGR01657 486 -----SSLKPSITHKALATCHSLTKLE-G---KLVGDPLDKKMFEATGW---TLEEDDESAEPTSIL-------AVVR-- 544 (1054)
T ss_pred -----cccCchHHHHHHHhCCeeEEEC-C---EEecCHHHHHHHHhCCC---EEECCCCcccccccc-------ccee--
Confidence 0011234566789999875432 2 46799999999987532 111100000000000 0000
Q ss_pred cccccccccceeeeecCCCCCceEEEEEecCC-CeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhh
Q 004437 491 CCEWWTKRSKRVATLEFDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMS 569 (753)
Q Consensus 491 ~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 569 (753)
.......+++++++||+|++||||++++..+ +++++|+|||||.|+++|++. ..++.+.+.+++|+
T Consensus 545 -~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a 611 (1054)
T TIGR01657 545 -TDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYT 611 (1054)
T ss_pred -ccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHH
Confidence 0000245788999999999999999998754 567899999999999999842 12456778899999
Q ss_pred hccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcC
Q 004437 570 SKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITG 649 (753)
Q Consensus 570 ~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TG 649 (753)
++|+|||++|||.......+. .....++.+|+||+|+|+++|+||+|++++++|++|+++||+++|+||
T Consensus 612 ~~G~RVLalA~k~l~~~~~~~-----------~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTG 680 (1054)
T TIGR01657 612 REGYRVLALAYKELPKLTLQK-----------AQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITG 680 (1054)
T ss_pred hcCCEEEEEEEeecCccchhh-----------hhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECC
Confidence 999999999999754210000 001134567899999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHcCCCCCCCcc-------------------------------------------------ccccccchh
Q 004437 650 DNKSTAEAICRQIKLFSGNEDL-------------------------------------------------TGRSFTGKE 680 (753)
Q Consensus 650 d~~~~a~~ia~~~gi~~~~~~~-------------------------------------------------~~~~~~~~~ 680 (753)
|+..||.++|+++||..+...+ ...+++|++
T Consensus 681 D~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~ 760 (1054)
T TIGR01657 681 DNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKA 760 (1054)
T ss_pred CCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHH
Confidence 9999999999999997543110 024677887
Q ss_pred hhcc---CHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 681 FMAL---SSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 681 ~~~~---~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
+..+ .++++.+++.+ ..||||++|+||.++|+.+|+.|+.|+|+|||+||+||||+||||||||
T Consensus 761 l~~l~~~~~~~l~~~~~~--~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~ 827 (1054)
T TIGR01657 761 FAVLQAHSPELLLRLLSH--TTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS 827 (1054)
T ss_pred HHHHHHhhHHHHHHHHhc--CeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec
Confidence 7653 34566667766 5799999999999999999999999999999999999999999999999
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-95 Score=777.24 Aligned_cols=674 Identities=31% Similarity=0.484 Sum_probs=565.4
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccC
Q 004437 5 PFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHS 84 (753)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~ 84 (753)
.+..|+|+++||+++|+++..+|||..++.+++.+.|+|..++|+..+-|..+.+|+.+.+.+++|++++++++.+.+..
T Consensus 36 ~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~ 115 (1019)
T KOG0203|consen 36 SMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQA 115 (1019)
T ss_pred eeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999998776655
Q ss_pred CCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCc
Q 004437 85 SDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDK 164 (753)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~ 164 (753)
+.....+....+.++++..++++..++.++|+.+..+.++.++.+.|..++|+|||.. +.+..++||+||++.++-||+
T Consensus 116 s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k-~~i~~eelVvGD~v~vk~Gdr 194 (1019)
T KOG0203|consen 116 STEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEK-MTINAEELVVGDLVEVKGGDR 194 (1019)
T ss_pred ccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeeccee-EEechhhcccccceeeccCCc
Confidence 4333333445666788888888889999999999999999999999999999999999 569999999999999999999
Q ss_pred ccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHH
Q 004437 165 VPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQ 244 (753)
Q Consensus 165 iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~ 244 (753)
||||.+++++ ..++||+|+|||||+|..+.+.... ...++..|+.|.+|.+++|.+.++|++||.+|.+|+++.+
T Consensus 195 VPADiRiis~--~g~~vdnsslTGesEP~~~~~~~t~---~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l 269 (1019)
T KOG0203|consen 195 VPADIRIISA--TGCKVDNSSLTGESEPQTRSPEFTH---ENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASL 269 (1019)
T ss_pred ccceeEEEEe--cceeEeccccccccCCccCCccccc---cCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhh
Confidence 9999999986 7899999999999999998874332 2337779999999999999999999999999999999987
Q ss_pred HhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccC
Q 004437 245 IHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPE 324 (753)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~ 324 (753)
... .+..++|+++.+.++..++...++++.+.+|++...... +| ..++.+.++++++.+|+
T Consensus 270 ~~~--~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy------~~-----------l~avv~~i~iivAnvPe 330 (1019)
T KOG0203|consen 270 ASG--LEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY------EW-----------LRAVVFLIGIIVANVPE 330 (1019)
T ss_pred hcc--CCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc------hh-----------HHHhhhhheeEEecCcC
Confidence 643 267899999999999998888887777777765442211 11 23444578899999999
Q ss_pred ChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCC
Q 004437 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPK 404 (753)
Q Consensus 325 ~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 404 (753)
+|+..++.++....+||+++++++|++++.|+||..++||+|||||||+|+|+|.++|..+.........+..+..+
T Consensus 331 GL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~--- 407 (1019)
T KOG0203|consen 331 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSF--- 407 (1019)
T ss_pred CccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccc---
Confidence 99999999999999999999999999999999999999999999999999999999998765321111000000000
Q ss_pred CCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCC-----cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhh
Q 004437 405 DGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGP-----LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479 (753)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~ 479 (753)
...++....+.+++.+||.+.+...+. .....|++.|.||+++++-.-...
T Consensus 408 ---------~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~--------------- 463 (1019)
T KOG0203|consen 408 ---------DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV--------------- 463 (1019)
T ss_pred ---------cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH---------------
Confidence 112456789999999999988764331 234678999999999987532211
Q ss_pred hcccccccccccccccccccceeeeecCCCCCceEEEEEecCC---CeEEEEEcCChHHHHHhcccccccCCceeeCCHH
Q 004437 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT---GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEP 556 (753)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~---~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~ 556 (753)
+..+++.+.+.++||+|.+|+.-.+.+..+ .++.+.+||+||.++++|+.+.. +|+..|++++
T Consensus 464 -------------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~ 529 (1019)
T KOG0203|consen 464 -------------MELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEK 529 (1019)
T ss_pred -------------HHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHH
Confidence 111667888899999999999999988655 46778899999999999999876 6788999999
Q ss_pred HHHHHHHHHHHhhhccceEEEEEEeccccc-cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHH
Q 004437 557 CWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAID 635 (753)
Q Consensus 557 ~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~ 635 (753)
.++.+.+...++...|.||++|+++....+ |.... . ++......--.+|.|+|++++-||+|..+++|+.
T Consensus 530 ~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~--------~-f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~ 600 (1019)
T KOG0203|consen 530 LKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGF--------Q-FDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVG 600 (1019)
T ss_pred HHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCce--------E-eecCCCCCcchhccccchhhccCCCcccCchhhh
Confidence 999999999999999999999999874422 21110 0 0001111123589999999999999999999999
Q ss_pred HHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcc--------------------ccccccchhhhccCHHHHHHHHHh
Q 004437 636 DCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--------------------TGRSFTGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 636 ~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~ 695 (753)
+|+.+||||+|+|||++.||.++|++.||....... ...+++|.++..+.++++.+++..
T Consensus 601 ~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~n 680 (1019)
T KOG0203|consen 601 KCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQN 680 (1019)
T ss_pred hhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHh
Confidence 999999999999999999999999999987633221 234689999999999999999999
Q ss_pred cCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 696 HGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 696 ~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
+...||||.+|+||..||+.+|++|..|+++|||.||+||||.|||||||||.|+|+.
T Consensus 681 h~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvs 738 (1019)
T KOG0203|consen 681 HQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 738 (1019)
T ss_pred CCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHH
Confidence 8889999999999999999999999999999999999999999999999999999973
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.9e-91 Score=840.30 Aligned_cols=668 Identities=25% Similarity=0.292 Sum_probs=499.8
Q ss_pred cCCCccCCCCCccH---HHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHhh
Q 004437 40 YGWNELDKEKGKPL---WQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQE 116 (753)
Q Consensus 40 yG~N~i~~~~~~~~---~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e 116 (753)
|.+|.+...|++.+ ++.+|+||+++.|+||++++++++++.+.... .+...+.++++++++.+.+.+++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~--------~~t~~~pL~~v~~~~~~~~~~ed 72 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY--------RGTSIVPLAFVLIVTAIKEAIED 72 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC--------ccHhHHhHHHHHHHHHHHHHHHH
Confidence 67899999888775 89999999999999999999999987653221 12223345555557778888999
Q ss_pred hHHHHHHHHHHhhcccccEEEeC-CeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeC--CcEEEEcccccCCCCcc
Q 004437 117 SNAEKALEALKKIQCESGKVLRD-GYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKT--SSLRVEQSSLTGEAMPI 193 (753)
Q Consensus 117 ~~~~~~~~~l~~~~~~~~~V~R~-g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s--~~~~Vdes~ltGEs~pv 193 (753)
+++.++.+++ +.+.++|+|+ |++ ++++|++|+|||||.|++||.||||++|+.+++ |.++||||+|||||+|+
T Consensus 73 ~~r~~~d~~~---n~~~~~v~~~~~~~-~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~ 148 (1057)
T TIGR01652 73 IRRRRRDKEV---NNRLTEVLEGHGQF-VEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLK 148 (1057)
T ss_pred HHHHHhHHHH---hCcEEEEECCCCcE-EEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecce
Confidence 9888877654 4578999997 788 469999999999999999999999999998644 67999999999999999
Q ss_pred ccCCCCCcC-------------------C----------------cccccccccEEEeecEEEe-eeEEEEEEEEccchh
Q 004437 194 LKGTSPVFL-------------------D----------------DCELQAKENMVFAGTTVVN-GSCVCIVINTGMNTE 237 (753)
Q Consensus 194 ~K~~~~~~~-------------------~----------------~~~~~~~~~~l~~Gt~v~~-g~~~~~V~~tG~~t~ 237 (753)
.|.+.+... + +....+.+|++|+||.+.+ |+++|+|++||.+|+
T Consensus 149 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk 228 (1057)
T TIGR01652 149 LRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTK 228 (1057)
T ss_pred EeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhh
Confidence 998643210 0 1123456899999999999 899999999999999
Q ss_pred HHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCc----ccccchhhHHHHHHH
Q 004437 238 IGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPA----NVQFSFEKCTYYFKI 313 (753)
Q Consensus 238 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~ 313 (753)
+++.... .+.+.+++++.++++..+++.+.+++|++++++...+... .....|.. ........+...+..
T Consensus 229 ~~~n~~~-----~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~ 302 (1057)
T TIGR01652 229 LMRNATQ-----APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDA-HGKDLWYIRLDVSERNAAANGFFSFLT 302 (1057)
T ss_pred hhhcCCC-----CcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecc-cCCCccceecCcccccchhHHHHHHHH
Confidence 9775422 2567899999999999888888888887777653322110 00112210 001111233446777
Q ss_pred HHHHHHHhccCChhHHHHHHHHHHH------HHHhcc----ccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEE
Q 004437 314 AVALAVAAIPEGLPAVITTCLALGT------RKMAQK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFT 383 (753)
Q Consensus 314 ~i~llv~~iP~~L~~~~~~~~~~~~------~~l~k~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~ 383 (753)
++.++..++|++|++.++++...++ .+|.++ ++++|+.+.+|+||+|++||+|||||||+|+|++++++.
T Consensus 303 ~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i 382 (1057)
T TIGR01652 303 FLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSI 382 (1057)
T ss_pred HHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEE
Confidence 8899999999999999999999998 778764 599999999999999999999999999999999999998
Q ss_pred cCcccceeeee----eecC-cccCCC------CCC--------cccC--CCCCccHHHHHHHHHHhhccCCeeec-CCC-
Q 004437 384 LGRKTTISRIF----HVEG-TTYDPK------DGG--------IVDW--PCYNMDANLQAMAKICAVCNDAGVYC-DGP- 440 (753)
Q Consensus 384 ~~~~~~~~~~~----~~~~-~~~~~~------~~~--------~~~~--~~~~~~~~~~~~~~~~~~c~~~~~~~-~~~- 440 (753)
.+..|+..... ..+. ..+.+. +.. +... ......+...+++.++++||++.+.. +++
T Consensus 383 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~ 462 (1057)
T TIGR01652 383 AGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGP 462 (1057)
T ss_pred CCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCC
Confidence 87655421100 0000 000000 000 0000 00111234678899999999987764 221
Q ss_pred --cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEE
Q 004437 441 --LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV 518 (753)
Q Consensus 441 --~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv 518 (753)
..+..++|+|.|++.+|+..|+....++.+..... ++ .......+++++.+||+|+||||||++
T Consensus 463 ~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~------i~--------~~~~~~~~~il~~~pF~s~rKrmSviv 528 (1057)
T TIGR01652 463 EEITYQAASPDEAALVKAARDVGFVFFERTPKSISLL------IE--------MHGETKEYEILNVLEFNSDRKRMSVIV 528 (1057)
T ss_pred CceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEE------EE--------eCCCEEEEEEEEecccCCCCCeEEEEE
Confidence 23446899999999999999988765432210000 00 000145688999999999999999999
Q ss_pred ecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEecccc-ccccccccCccc
Q 004437 519 REPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELG-EFSDYYSESHPA 597 (753)
Q Consensus 519 ~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~-~~~~~~~~~~~~ 597 (753)
+.+++++++|+|||||.|+++|+. .+++.++.+.+++++|+.+|+||+++|||...+ ++.+|..++..+
T Consensus 529 ~~~~~~~~l~~KGA~e~il~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a 598 (1057)
T TIGR01652 529 RNPDGRIKLLCKGADTVIFKRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEA 598 (1057)
T ss_pred EeCCCeEEEEEeCcHHHHHHHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHH
Confidence 988888899999999999999974 123456788899999999999999999998543 344443332221
Q ss_pred ccccCC-----CcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcc-
Q 004437 598 HKKLLD-----PSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL- 671 (753)
Q Consensus 598 ~~~~~~-----~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~- 671 (753)
.....+ ...+..+|+||+|+|+++++|++|++++++|+.|+++||+|||+|||+.+||.++|++||+.......
T Consensus 599 ~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~ 678 (1057)
T TIGR01652 599 STALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQI 678 (1057)
T ss_pred HhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEE
Confidence 111111 11234678999999999999999999999999999999999999999999999999999998754321
Q ss_pred ------------------------------------ccccccchhhhccCHHH----HHHHHHhcCCeEEEeeCchhHHH
Q 004437 672 ------------------------------------TGRSFTGKEFMALSSTQ----QIEALSKHGGKVFSRAEPRHKQE 711 (753)
Q Consensus 672 ------------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~p~~K~~ 711 (753)
...+++|+.+..+.+++ +.+++..+...|+||++|+||.+
T Consensus 679 ~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~ 758 (1057)
T TIGR01652 679 VITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKAD 758 (1057)
T ss_pred EEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHH
Confidence 01367888777554432 34456677678999999999999
Q ss_pred HHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 712 IVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 712 ~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
+|+.+|+. |+.|+|+|||.||++||++|||||+ +.|.|
T Consensus 759 IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIg--i~g~e 797 (1057)
T TIGR01652 759 VVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVG--ISGKE 797 (1057)
T ss_pred HHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeE--ecChH
Confidence 99999998 9999999999999999999999994 45554
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.4e-89 Score=810.43 Aligned_cols=670 Identities=21% Similarity=0.235 Sum_probs=499.9
Q ss_pred HhcCCCccCCCCCcc---HHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Q 004437 38 ERYGWNELDKEKGKP---LWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVW 114 (753)
Q Consensus 38 ~~yG~N~i~~~~~~~---~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~ 114 (753)
.+|..|.+.+.|++. +++++|+||+++.|+||++++++++++.+.... .+...+.+++++++..+.+.+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~--------~~t~~~PL~~vl~v~~ike~~ 156 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG--------RGASILPLAFVLLVTAVKDAY 156 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC--------cchHHHHHHHHHHHHHHHHHH
Confidence 369999999988764 678999999999999999999999988654321 233344555666666677777
Q ss_pred hhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeC--CcEEEEcccccCCCCc
Q 004437 115 QESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKT--SSLRVEQSSLTGEAMP 192 (753)
Q Consensus 115 ~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s--~~~~Vdes~ltGEs~p 192 (753)
+++++.++.++. +++.++|+|+|++. +++|++|+|||||.|++||.||||++|++++. |.++||||+||||+.|
T Consensus 157 Ed~~r~k~d~~~---N~~~~~v~~~~~~~-~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~ 232 (1178)
T PLN03190 157 EDWRRHRSDRIE---NNRLAWVLVDDQFQ-EKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNL 232 (1178)
T ss_pred HHHHHHHhHHhh---cCcEEEEEECCeEE-EEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeee
Confidence 777777766554 35678999999994 69999999999999999999999999997643 7799999999999999
Q ss_pred cccCCCCCcC-----------------C---------------cccccccccEEEeecEEEee-eEEEEEEEEccchhHH
Q 004437 193 ILKGTSPVFL-----------------D---------------DCELQAKENMVFAGTTVVNG-SCVCIVINTGMNTEIG 239 (753)
Q Consensus 193 v~K~~~~~~~-----------------~---------------~~~~~~~~~~l~~Gt~v~~g-~~~~~V~~tG~~t~~g 239 (753)
+.|.+.+... + .....+.+|++++|+.+.++ +++|+|++||.+|++.
T Consensus 233 k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~ 312 (1178)
T PLN03190 233 KTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM 312 (1178)
T ss_pred eEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh
Confidence 9998643211 0 01134568999999999987 8999999999999964
Q ss_pred HHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---ccCCCCcc----------ccc-c-h
Q 004437 240 KIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWD---VVDGWPAN----------VQF-S-F 304 (753)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----------~~~-~-~ 304 (753)
+.. .....+.+++++.+|++..+++.+.+++|++++++...|..... .+.+|... ..+ . .
T Consensus 313 ~N~-----~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 387 (1178)
T PLN03190 313 LNN-----SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWG 387 (1178)
T ss_pred hcC-----CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhh
Confidence 432 22246789999999999988888888888777665322211000 00111100 000 0 0
Q ss_pred hhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccc----------cccccchhhhhcCCeeEEeeCCCcccccC
Q 004437 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKN----------AIVRKLPSVETLGCTTVICSDKTGTLTTN 374 (753)
Q Consensus 305 ~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~----------ilvk~~~~le~lg~v~~i~~DKTGTLT~~ 374 (753)
......+..++.++..++|++|++.++++....+.+|.++. +.||+.+.+|+||+|++||+|||||||+|
T Consensus 388 ~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N 467 (1178)
T PLN03190 388 WEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTEN 467 (1178)
T ss_pred HHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccc
Confidence 11123344456677789999999999999988777776543 77999999999999999999999999999
Q ss_pred ceEEEEEEEcCcccceeeee----------eecCcccCCCCCC-----cccC---C-CCCccHHHHHHHHHHhhccCCee
Q 004437 375 QMSVTEFFTLGRKTTISRIF----------HVEGTTYDPKDGG-----IVDW---P-CYNMDANLQAMAKICAVCNDAGV 435 (753)
Q Consensus 375 ~~~v~~i~~~~~~~~~~~~~----------~~~~~~~~~~~~~-----~~~~---~-~~~~~~~~~~~~~~~~~c~~~~~ 435 (753)
+|.+++++..+..|+..... ...+..+.|.... .... . .......+.+++.++++||++.+
T Consensus 468 ~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~ 547 (1178)
T PLN03190 468 KMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVP 547 (1178)
T ss_pred eEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCcee
Confidence 99999999987766432100 0011111111000 0000 0 00112346789999999999876
Q ss_pred ec-CC--C-----cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecC
Q 004437 436 YC-DG--P-----LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEF 507 (753)
Q Consensus 436 ~~-~~--~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F 507 (753)
.. ++ + ..+..++|+|.||+.+|.+.|+.+..+.......... ..+..+++++.+||
T Consensus 548 ~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~----------------~~~~~~~il~~~pF 611 (1178)
T PLN03190 548 IVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIH----------------GERQRFNVLGLHEF 611 (1178)
T ss_pred eccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeec----------------cceecceeEEEecc
Confidence 42 11 1 1244559999999999999999887765443221111 12567899999999
Q ss_pred CCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccc-cc
Q 004437 508 DRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDEL-GE 586 (753)
Q Consensus 508 ~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~-~~ 586 (753)
+|+||||||+++.+++++++|+|||||.|+++|+... +++.++.+.+++++|+++|+|||++|||..+ .+
T Consensus 612 ~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e 682 (1178)
T PLN03190 612 DSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSE 682 (1178)
T ss_pred cccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHH
Confidence 9999999999998888899999999999999997532 2345677889999999999999999999964 34
Q ss_pred cccccccCcccccccCC-----CcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 004437 587 FSDYYSESHPAHKKLLD-----PSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661 (753)
Q Consensus 587 ~~~~~~~~~~~~~~~~~-----~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~ 661 (753)
+.+|..++..+.....+ ......+|+||+++|+++++|++|++++++|++|+++||+|||+|||+.+||.+||++
T Consensus 683 ~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 683 FEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred HhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 55554433222111111 1233567999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcc---------------------------------------------ccccccchhhhccCH----HHHHHH
Q 004437 662 IKLFSGNEDL---------------------------------------------TGRSFTGKEFMALSS----TQQIEA 692 (753)
Q Consensus 662 ~gi~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~----~~~~~~ 692 (753)
|||..+.... ...+++|..+..+.+ +.+.++
T Consensus 763 ~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l 842 (1178)
T PLN03190 763 SKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQL 842 (1178)
T ss_pred hCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHH
Confidence 9997654210 114567777766654 455667
Q ss_pred HHhcCCeEEEeeCchhHHHHHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 693 LSKHGGKVFSRAEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 693 ~~~~~~~v~~~~~p~~K~~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..+|...|+||++|.||.++|+.+|+. ++.|+|+|||+||++||++||||| ||.|+|
T Consensus 843 ~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~E 900 (1178)
T PLN03190 843 ASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQE 900 (1178)
T ss_pred HHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCch
Confidence 778877899999999999999999998 589999999999999999999999 888877
No 17
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-88 Score=731.11 Aligned_cols=647 Identities=22% Similarity=0.317 Sum_probs=480.2
Q ss_pred CCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHH
Q 004437 24 LDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVL 103 (753)
Q Consensus 24 ~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 103 (753)
..+||+..++.+|+..||+|.+..+ .++++.++.++--+|+.++ .++++++|+..+ +|+++.+|++
T Consensus 157 ~~~gL~~~~~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlF----Q~fSv~lW~~d~---------Y~~YA~cI~i 222 (1140)
T KOG0208|consen 157 VSNGLERQEIIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLF----QAFSVALWLADS---------YYYYAFCIVI 222 (1140)
T ss_pred ccCCccHHHHHhHHhhcCCceeeee-cccHHHHHHHhccchHHHH----HhHHhhhhhccc---------chhhhhHHHH
Confidence 4689999999999999999999886 5889999998877776554 455566665433 5667888888
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecC-CCcccccEEEEEeeCCcEEEE
Q 004437 104 ILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGV-GDKVPADMRVAALKTSSLRVE 182 (753)
Q Consensus 104 ~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~-G~~iPaD~~vl~~~s~~~~Vd 182 (753)
+.+.+.++..|+.++..+.++++-+. ...++|+|+|.| ++|.++|||||||+.+.+ |-..|||+++++ |+|.||
T Consensus 223 isv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g~~-~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~---g~civN 297 (1140)
T KOG0208|consen 223 ISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDGFW-ETVDSSELVPGDILYIPPPGKIMPCDALLIS---GDCIVN 297 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECCEE-EEEeccccccccEEEECCCCeEeecceEEEe---CcEEee
Confidence 88999999999999888888877654 357899999999 579999999999999998 899999999997 999999
Q ss_pred cccccCCCCccccCCCCCcCCc------ccccccccEEEeecEEEe------eeEEEEEEEEccchhHHHHHHHHhhhcc
Q 004437 183 QSSLTGEAMPILKGTSPVFLDD------CELQAKENMVFAGTTVVN------GSCVCIVINTGMNTEIGKIQKQIHDASL 250 (753)
Q Consensus 183 es~ltGEs~pv~K~~~~~~~~~------~~~~~~~~~l~~Gt~v~~------g~~~~~V~~tG~~t~~g~~~~~~~~~~~ 250 (753)
||+|||||.|+.|.+.+..... ....+..|.+|+||.+++ +.+.++|++||.+|..|++.+.+.++
T Consensus 298 EsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP-- 375 (1140)
T KOG0208|consen 298 ESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP-- 375 (1140)
T ss_pred cccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC--
Confidence 9999999999999987622111 223456899999999986 47999999999999999999998764
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHH
Q 004437 251 EESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVI 330 (753)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~ 330 (753)
++.++ ++-+-+..++.++.+++++.++.....+.. .+. .....+.+++.++...+|++||.++
T Consensus 376 --kP~~f--kfyrds~~fi~~l~~ia~~gfiy~~i~l~~----~g~---------~~~~iiirsLDliTi~VPPALPAal 438 (1140)
T KOG0208|consen 376 --KPVNF--KFYRDSFKFILFLVIIALIGFIYTAIVLNL----LGV---------PLKTIIIRSLDLITIVVPPALPAAL 438 (1140)
T ss_pred --CCccc--HHHHHHHHHHHHHHHHHHHHHHHHhHhHHH----cCC---------CHHHHhhhhhcEEEEecCCCchhhh
Confidence 33333 444444455555555555555543322211 111 1134567788999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeee-ecCcccCCCCCCcc
Q 004437 331 TTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFH-VEGTTYDPKDGGIV 409 (753)
Q Consensus 331 ~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 409 (753)
++...++..||.|+||+|.++..+...|++|++|||||||||++.+.+-.+.............. ...... +...
T Consensus 439 tvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~----~~~~ 514 (1140)
T KOG0208|consen 439 TVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSL----QLFY 514 (1140)
T ss_pred hHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhc----ccee
Confidence 99999999999999999999999999999999999999999999999999887543211110000 000000 0000
Q ss_pred cCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccc
Q 004437 410 DWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRL 489 (753)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (753)
.....+.....-.+..+++.||....... ...|+|.|.-+.+.. |+......... ..........+...+.
T Consensus 515 ~l~~~~~~~~~~~~~~a~atCHSL~~v~g----~l~GDPLdlkmfe~t---~w~~ee~~~~~--~~~~~~~~~~p~v~~p 585 (1140)
T KOG0208|consen 515 KLSLRSSSLPMGNLVAAMATCHSLTLVDG----TLVGDPLDLKMFEST---GWVYEEADIED--EATREFNTLIPTVVRP 585 (1140)
T ss_pred eccccccCCchHHHHHHHhhhceeEEeCC----eeccCceeeeeeecc---ceEEEeccccc--hhhhhhCCccCCEeCC
Confidence 00000111113467788899995433322 457888886655433 33332211000 0000000111111111
Q ss_pred cc------ccccccccceeeeecCCCCCceEEEEEecCC-CeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHH
Q 004437 490 GC------CEWWTKRSKRVATLEFDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLML 562 (753)
Q Consensus 490 ~~------~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~ 562 (753)
.. .+...+.+.+++.+||+|..+|||||++.+. .+.++|+|||||.|.+.|++.. .+..++
T Consensus 586 ~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t------------vP~dy~ 653 (1140)
T KOG0208|consen 586 PENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET------------VPADYQ 653 (1140)
T ss_pred CcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc------------CCccHH
Confidence 11 1111236889999999999999999999764 6789999999999999997643 245688
Q ss_pred HHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC
Q 004437 563 SRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI 642 (753)
Q Consensus 563 ~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi 642 (753)
+.++.|+.+|+||||+|+|..... .|.+ .....|+.+|+||+|+|++.|++++|++++.+|++|+++.|
T Consensus 654 evl~~Yt~~GfRVIAlA~K~L~~~--~~~~---------~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnI 722 (1140)
T KOG0208|consen 654 EVLKEYTHQGFRVIALASKELETS--TLQK---------AQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANI 722 (1140)
T ss_pred HHHHHHHhCCeEEEEEecCccCcc--hHHH---------HhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcc
Confidence 899999999999999999985432 1111 11236788999999999999999999999999999999999
Q ss_pred eEEEEcCCChHHHHHHHHHcCCCCCCCccc--------------------------------------------------
Q 004437 643 EVMVITGDNKSTAEAICRQIKLFSGNEDLT-------------------------------------------------- 672 (753)
Q Consensus 643 ~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~-------------------------------------------------- 672 (753)
+++|+|||+..||..+||+||+..+...+.
T Consensus 723 RtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 802 (1140)
T KOG0208|consen 723 RTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKD 802 (1140)
T ss_pred eEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccce
Confidence 999999999999999999999987543210
Q ss_pred -cccccchhhhccC---HHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 673 -GRSFTGKEFMALS---STQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 673 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
...++|+.|..+. .+...+++.+ ..|||||+|.||.++|+.||+.|+.|+|+|||+||+.|||+|||||+++
T Consensus 803 yhlA~sG~~f~~i~~~~~~l~~~Il~~--~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLS 878 (1140)
T KOG0208|consen 803 YHLAMSGKTFQVILEHFPELVPKILLK--GTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLS 878 (1140)
T ss_pred eEEEecCchhHHHHhhcHHHHHHHHhc--CeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchh
Confidence 0124555555443 2334455666 6899999999999999999999999999999999999999999999998
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.7e-83 Score=717.97 Aligned_cols=507 Identities=25% Similarity=0.333 Sum_probs=413.9
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhccCCC-CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhccc-ccEE
Q 004437 59 EQFDDTLVKILLVAAFISFILAYFHSSD-SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCE-SGKV 136 (753)
Q Consensus 59 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 136 (753)
.||++|+.++++++++++++++++.... +.......|...+.+++.+++..+++.++++|+++.++.|+++.++ +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 4678999999999999999987653211 0111123445555566666777778889999999999999998875 6999
Q ss_pred EeCCe-eeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEE
Q 004437 137 LRDGY-LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVF 215 (753)
Q Consensus 137 ~R~g~-~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~ 215 (753)
+|+|+ + ++|++++|++||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+.. ..+.+|
T Consensus 109 ir~g~~~-~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~----------~~~~V~ 174 (679)
T PRK01122 109 LREPGAA-EEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGG----------DFSSVT 174 (679)
T ss_pred EECCCEE-EEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCC----------ccCeEE
Confidence 99988 6 579999999999999999999999999998 67899999999999999998731 123499
Q ss_pred eecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCC
Q 004437 216 AGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG 295 (753)
Q Consensus 216 ~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (753)
+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..++.+...++.++++++++++.+.+ +. +
T Consensus 175 aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a--~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~--~~------g 244 (679)
T PRK01122 175 GGTRVLSDWIVIRITANPGESFLDRMIALVEGA--KRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA--YS------G 244 (679)
T ss_pred eceEEEeeeEEEEEEEecccCHHHHHHHHHHhc--cccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH--Hh------C
Confidence 999999999999999999999999999999876 5678999988887766665544443333332211 11 1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCc
Q 004437 296 WPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 375 (753)
Q Consensus 296 ~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~ 375 (753)
+ ...+.+++++++++|||+|+...+.....++.||+++|+++|+.+++|+||++|++|||||||||+|+
T Consensus 245 ~-----------~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~ 313 (679)
T PRK01122 245 G-----------ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGN 313 (679)
T ss_pred c-----------hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCc
Confidence 1 12466788999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHH
Q 004437 376 MSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKV 455 (753)
Q Consensus 376 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~ 455 (753)
|.+.+++..+. . ..+.++.++++|+. ...||...|++.
T Consensus 314 ~~v~~~~~~~~--------------~-----------------~~~~ll~~a~~~s~-----------~s~hP~~~AIv~ 351 (679)
T PRK01122 314 RQASEFLPVPG--------------V-----------------TEEELADAAQLSSL-----------ADETPEGRSIVV 351 (679)
T ss_pred EEEEEEEeCCC--------------C-----------------CHHHHHHHHHHhcC-----------CCCCchHHHHHH
Confidence 99998764321 0 01345666666653 234799999999
Q ss_pred HHHH-cCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChH
Q 004437 456 LVEK-MGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVE 534 (753)
Q Consensus 456 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e 534 (753)
++++ .+.... ...+.....+||++.+++|++.+. | ..|.||++|
T Consensus 352 ~a~~~~~~~~~------------------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e 396 (679)
T PRK01122 352 LAKQRFNLRER------------------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVD 396 (679)
T ss_pred HHHhhcCCCch------------------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHH
Confidence 9876 232110 112345677899999888887653 3 578999999
Q ss_pred HHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCe
Q 004437 535 SLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDL 614 (753)
Q Consensus 535 ~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 614 (753)
.+++.|.. +|... ++.+.+.+++++++|+|++++|+ |+
T Consensus 397 ~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~--------------------------------~~ 434 (679)
T PRK01122 397 AIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE--------------------------------DN 434 (679)
T ss_pred HHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE--------------------------------CC
Confidence 99999964 12111 24566778899999999999985 45
Q ss_pred EEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHH
Q 004437 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS 694 (753)
Q Consensus 615 ~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (753)
+++|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+++|+
T Consensus 435 ~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI------------------------------ 484 (679)
T PRK01122 435 RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV------------------------------ 484 (679)
T ss_pred eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC------------------------------
Confidence 79999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 695 KHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 695 ~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
..+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 485 ---d~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 539 (679)
T PRK01122 485 ---DDFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 539 (679)
T ss_pred ---cEEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHH
Confidence 3699999999999999999999999999999999999999999999999 999864
No 19
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.2e-82 Score=708.35 Aligned_cols=501 Identities=24% Similarity=0.346 Sum_probs=400.6
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHh----hhHHHHHHHHHHhhccc-cc
Q 004437 60 QFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQ----ESNAEKALEALKKIQCE-SG 134 (753)
Q Consensus 60 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~----e~~~~~~~~~l~~~~~~-~~ 134 (753)
+|++|+.++++++++++++++.+....+ ..++ ..++++.++++++++.+++.++ |+|++++++.|+++.++ ++
T Consensus 29 ~~~~p~~~il~~aa~ls~~~~~~~~~~~-~~~~-~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 29 MIKNPIMFVVEVGMLLALGLTIYPDLFH-QESV-SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHChHHHHHHHHHHHHHHHHHHhhhcc-cccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 4679999999999999998877633111 1111 1345667777777777777777 68899999999998875 67
Q ss_pred E-EEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccE
Q 004437 135 K-VLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENM 213 (753)
Q Consensus 135 ~-V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~ 213 (753)
+ |.|||++ ++|++++|+|||+|.|++||+|||||+|++ |...||||+|||||.|+.|.+.. ..+.
T Consensus 107 ~~v~rdg~~-~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~----------d~~~ 172 (673)
T PRK14010 107 RRIKQDGSY-EMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG----------DFDN 172 (673)
T ss_pred EEEEeCCEE-EEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC----------ccCe
Confidence 5 7799998 569999999999999999999999999998 77899999999999999998731 0145
Q ss_pred EEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 004437 214 VFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVV 293 (753)
Q Consensus 214 l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (753)
+|+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..+..+...++. ++++++++++.+..+.
T Consensus 173 V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a--~~~ktp~e~~l~~l~~~l~i--i~l~~~~~~~~~~~~~----- 243 (673)
T PRK14010 173 VIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGA--TRKKTPNEIALFTLLMTLTI--IFLVVILTMYPLAKFL----- 243 (673)
T ss_pred eecCceeecceEEEEEEEecccCHHHHHHHHHhhc--cccCCHHHHHHHHHHHHHhH--HHHHHHHHHHHHHhhc-----
Confidence 99999999999999999999999999999999876 56789999776555433322 2222222221110000
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCccccc
Q 004437 294 DGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTT 373 (753)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~ 373 (753)
+ +...+.+.+++++.+|||+|+..++++.+.++.||+|+|+++|+.+++|+||++|++|||||||||+
T Consensus 244 -~-----------~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~ 311 (673)
T PRK14010 244 -N-----------FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITY 311 (673)
T ss_pred -c-----------HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCC
Confidence 1 1224556778888899999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHH
Q 004437 374 NQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAAL 453 (753)
Q Consensus 374 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al 453 (753)
|++.+.++...+. ....+++..+.+|+.. ..||++.|+
T Consensus 312 Gn~~~~~~~~~~~-------------------------------~~~~~ll~~a~~~~~~-----------s~~P~~~AI 349 (673)
T PRK14010 312 GNRMADAFIPVKS-------------------------------SSFERLVKAAYESSIA-----------DDTPEGRSI 349 (673)
T ss_pred CCeEEEEEEeCCC-------------------------------ccHHHHHHHHHHhcCC-----------CCChHHHHH
Confidence 8887776543210 0124456666777632 349999999
Q ss_pred HHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCCh
Q 004437 454 KVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSV 533 (753)
Q Consensus 454 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~ 533 (753)
+.++++.++.... .....+||++++|+|++.++ ++ .+.||+|
T Consensus 350 v~~a~~~~~~~~~---------------------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~ 391 (673)
T PRK14010 350 VKLAYKQHIDLPQ---------------------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAP 391 (673)
T ss_pred HHHHHHcCCCchh---------------------------------hhcceeccccccceeEEEEC---CE--EEEECCH
Confidence 9999876543210 01124799999999998753 32 4569999
Q ss_pred HHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCC
Q 004437 534 ESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESD 613 (753)
Q Consensus 534 e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 613 (753)
+.++++|+. ++...|. .+.+..++++++|+|+++++. |
T Consensus 392 ~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~~--------------------------------~ 429 (673)
T PRK14010 392 NSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVLE--------------------------------D 429 (673)
T ss_pred HHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEEE--------------------------------C
Confidence 999999985 2222221 245566788999999998752 5
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHH
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
++++|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+++|+
T Consensus 430 ~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI----------------------------- 480 (673)
T PRK14010 430 NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV----------------------------- 480 (673)
T ss_pred CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-----------------------------
Confidence 689999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 694 ~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
..+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 481 ----~~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 535 (673)
T PRK14010 481 ----DRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSA 535 (673)
T ss_pred ----ceEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHH
Confidence 3699999999999999999999999999999999999999999999999 999874
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.3e-79 Score=684.71 Aligned_cols=508 Identities=25% Similarity=0.359 Sum_probs=407.3
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhh---hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccc-c
Q 004437 59 EQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEP---LVIVLILVLNAIVGVWQESNAEKALEALKKIQCES-G 134 (753)
Q Consensus 59 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~-~ 134 (753)
.||++|..++++++++++++++++....+.+.....|++. +++++.+++..+++.++++|+++++++|+++.+++ +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 4678999999999999999987653211111010135543 33455566777788899999999999999987764 7
Q ss_pred EEEe-CCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccE
Q 004437 135 KVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENM 213 (753)
Q Consensus 135 ~V~R-~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~ 213 (753)
+|+| ||++ ++|++++|+|||+|.|++||+|||||+|++ |.+.||||+|||||.|+.|.+... .+.
T Consensus 108 ~vlr~dg~~-~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~----------~~~ 173 (675)
T TIGR01497 108 KLLRDDGAI-DKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD----------FAS 173 (675)
T ss_pred EEEeeCCEE-EEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC----------cce
Confidence 7885 8888 579999999999999999999999999998 789999999999999999987311 124
Q ss_pred EEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 004437 214 VFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVV 293 (753)
Q Consensus 214 l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (753)
+|+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..++.+...+..+.+++++++|.+.. |
T Consensus 174 V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a--~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~-----~--- 243 (675)
T TIGR01497 174 VTGGTRILSDWLVVECTANPGETFLDRMIALVEGA--QRRKTPNEIALTILLIALTLVFLLVTATLWPFAA-----Y--- 243 (675)
T ss_pred eecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhc--ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h---
Confidence 99999999999999999999999999999999876 5678999988887765554443333332222210 0
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCccccc
Q 004437 294 DGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTT 373 (753)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~ 373 (753)
.+. ...+..++++++++|||+|+...+.....++.||+++|+++|+..++|+||++|++|||||||||+
T Consensus 244 ~~~-----------~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~ 312 (675)
T TIGR01497 244 GGN-----------AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITL 312 (675)
T ss_pred cCh-----------hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccC
Confidence 000 123556788999999999988888877889999999999999999999999999999999999999
Q ss_pred CceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHH
Q 004437 374 NQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAAL 453 (753)
Q Consensus 374 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al 453 (753)
|+|++.+++..+. . ...+++..+++|+. ...||.+.|+
T Consensus 313 g~~~v~~~~~~~~--------------~-----------------~~~~ll~~aa~~~~-----------~s~hP~a~Ai 350 (675)
T TIGR01497 313 GNRLASEFIPAQG--------------V-----------------DEKTLADAAQLASL-----------ADDTPEGKSI 350 (675)
T ss_pred CCeEEEEEEecCC--------------C-----------------cHHHHHHHHHHhcC-----------CCCCcHHHHH
Confidence 9999999874321 0 11345666666653 2358999999
Q ss_pred HHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCCh
Q 004437 454 KVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSV 533 (753)
Q Consensus 454 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~ 533 (753)
+.++++.|..... ..+......||++.++++++.+. +| ..+.||+|
T Consensus 351 v~~a~~~~~~~~~------------------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~ 396 (675)
T TIGR01497 351 VILAKQLGIREDD------------------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAV 396 (675)
T ss_pred HHHHHHcCCCccc------------------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCH
Confidence 9999876543211 11234567899999877776543 23 57899999
Q ss_pred HHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCC
Q 004437 534 ESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESD 613 (753)
Q Consensus 534 e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 613 (753)
|.+++.|.. +|... +..+.+.+++++++|+|++++|+ |
T Consensus 397 e~i~~~~~~----~g~~~------~~~~~~~~~~~a~~G~r~l~va~--------------------------------~ 434 (675)
T TIGR01497 397 DAIKRHVEA----NGGHI------PTDLDQAVDQVARQGGTPLVVCE--------------------------------D 434 (675)
T ss_pred HHHHHHHHh----cCCCC------cHHHHHHHHHHHhCCCeEEEEEE--------------------------------C
Confidence 999998853 12211 23466778889999999999996 2
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHH
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
.+++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|+
T Consensus 435 ~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI----------------------------- 485 (675)
T TIGR01497 435 NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV----------------------------- 485 (675)
T ss_pred CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC-----------------------------
Confidence 479999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 694 ~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
..+++|++|++|..+|+.+|++|+.|+|+|||.||+|||++|||||||| +|++++
T Consensus 486 ----~~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~a 540 (675)
T TIGR01497 486 ----DDFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 540 (675)
T ss_pred ----CEEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHH
Confidence 4689999999999999999999999999999999999999999999999 998753
No 21
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-78 Score=628.02 Aligned_cols=594 Identities=29% Similarity=0.409 Sum_probs=466.9
Q ss_pred ccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCC
Q 004437 9 WSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSG 88 (753)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (753)
-+.+++++.++|..+.+ |||++|+++|++.||+|+...++ .+.+..|+.-|.+|+.+..-.+|++...+.--.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E~~eRlk~fG~NkleEkk-en~~lKFl~Fm~~PlswVMEaAAimA~~Lang~----- 91 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDEVEERLKIFGPNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIGLANGG----- 91 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHHHHHHHHhhCchhhhhhh-hhHHHHHHHHHhchHHHHHHHHHHHHHHHhcCC-----
Confidence 46789999999998754 99999999999999999998654 444445556778999999999999887664211
Q ss_pred CCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCccccc
Q 004437 89 DSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPAD 168 (753)
Q Consensus 89 ~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD 168 (753)
....+|.+...|..++++|+.+++++|+++.+....|.+....+.+|+|||+| .+++++.|||||||.++.|++||||
T Consensus 92 -~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw-~E~eAs~lVPGDIlsik~GdIiPaD 169 (942)
T KOG0205|consen 92 -GRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKW-SEQEASILVPGDILSIKLGDIIPAD 169 (942)
T ss_pred -CCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCee-eeeeccccccCceeeeccCCEecCc
Confidence 12347888889999999999999999999999999999888889999999999 5799999999999999999999999
Q ss_pred EEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhh
Q 004437 169 MRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (753)
Q Consensus 169 ~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~ 248 (753)
+++++. +.+.||+|.|||||.|+.|.+ ++.+|+||+|.+|++.++|++||.+|..|+-+.++..
T Consensus 170 aRLl~g--D~LkiDQSAlTGESLpvtKh~-------------gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds- 233 (942)
T KOG0205|consen 170 ARLLEG--DPLKIDQSALTGESLPVTKHP-------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS- 233 (942)
T ss_pred cceecC--CccccchhhhcCCccccccCC-------------CCceecccccccceEEEEEEEeccceeehhhHHhhcC-
Confidence 999985 689999999999999999988 7889999999999999999999999999999998865
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHH-HHHHhccCChh
Q 004437 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVA-LAVAAIPEGLP 327 (753)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-llv~~iP~~L~ 327 (753)
.....++++.++.+.++++..+++-.++.+++.+ +.. .. ........+. +++..+|.+||
T Consensus 234 --t~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy--~~q----~R-----------~~r~~i~nLlvllIGgiPiamP 294 (942)
T KOG0205|consen 234 --TNQVGHFQKVLTGIGNFCICSIALGMLIEITVMY--PIQ----HR-----------LYRDGIDNLLVLLIGGIPIAMP 294 (942)
T ss_pred --CCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhh--hhh----hh-----------hhhhhhhheheeeecccccccc
Confidence 3566788998888877665443332222222211 010 00 0011122233 44455999999
Q ss_pred HHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEE--EEEcCcccceeeeeeecCcccCCCC
Q 004437 328 AVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTE--FFTLGRKTTISRIFHVEGTTYDPKD 405 (753)
Q Consensus 328 ~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~~~ 405 (753)
..++..++.++.||+++|.++++..++|.|+.+|++|+|||||||.|+++|.+ +... .+ ..
T Consensus 295 tVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~-----------v~--gv---- 357 (942)
T KOG0205|consen 295 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF-----------VK--GV---- 357 (942)
T ss_pred eeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee-----------ec--CC----
Confidence 99999999999999999999999999999999999999999999999999977 2110 00 11
Q ss_pred CCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccc
Q 004437 406 GGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485 (753)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 485 (753)
++.-..+..|.+. .. ...+-.|.|++..... +
T Consensus 358 -----------~~D~~~L~A~rAs----r~--------en~DAID~A~v~~L~d---P---------------------- 389 (942)
T KOG0205|consen 358 -----------DKDDVLLTAARAS----RK--------ENQDAIDAAIVGMLAD---P---------------------- 389 (942)
T ss_pred -----------ChHHHHHHHHHHh----hh--------cChhhHHHHHHHhhcC---H----------------------
Confidence 1111222222221 11 1125567777665431 1
Q ss_pred ccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHH
Q 004437 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRH 565 (753)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 565 (753)
+..+..+..++..||++..||.+..+.+++|+.+..+||+||.|++.|+ .+++.++++.+.+
T Consensus 390 -------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~-----------~~~~i~~~vh~~i 451 (942)
T KOG0205|consen 390 -------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCN-----------EDHDIPERVHSII 451 (942)
T ss_pred -------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhh-----------ccCcchHHHHHHH
Confidence 1115678889999999999999999999999999999999999999997 3456788899999
Q ss_pred HHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEE
Q 004437 566 LEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVM 645 (753)
Q Consensus 566 ~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~ 645 (753)
++|+++|+|.+++|++...+...+ .-....+|+|+.-+-||+|.++.++|.+..+.|+.|.
T Consensus 452 d~~AeRGlRSLgVArq~v~e~~~~-------------------~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vk 512 (942)
T KOG0205|consen 452 DKFAERGLRSLAVARQEVPEKTKE-------------------SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVK 512 (942)
T ss_pred HHHHHhcchhhhhhhhcccccccc-------------------CCCCCcccccccccCCCCccchHHHHHHHHhccceee
Confidence 999999999999999874432111 1134578999999999999999999999999999999
Q ss_pred EEcCCChHHHHHHHHHcCCCCCCCccccccccchh-hhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEE
Q 004437 646 VITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKE-FMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724 (753)
Q Consensus 646 i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~ 724 (753)
|+|||...-+...++++|+-.+... +..+-|.. -..+...+..+++.+ .+-|+.+.|++|..+|+.||+++|.|+
T Consensus 513 mitgdqlaI~keTgrrlgmgtnmyp--ss~llG~~~~~~~~~~~v~elie~--adgfAgVfpehKy~iV~~Lq~r~hi~g 588 (942)
T KOG0205|consen 513 MITGDQLAIAKETGRRLGMGTNMYP--SSALLGLGKDGSMPGSPVDELIEK--ADGFAGVFPEHKYEIVKILQERKHIVG 588 (942)
T ss_pred eecchHHHHHHhhhhhhccccCcCC--chhhccCCCCCCCCCCcHHHHhhh--ccCccccCHHHHHHHHHHHhhcCceec
Confidence 9999999999999999998542111 11111111 011222233344444 578999999999999999999999999
Q ss_pred EEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 725 MTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 725 ~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|+|||.||+|+|+.||+|||+. +++|.+
T Consensus 589 mtgdgvndapaLKkAdigiava-~atdaa 616 (942)
T KOG0205|consen 589 MTGDGVNDAPALKKADIGIAVA-DATDAA 616 (942)
T ss_pred ccCCCcccchhhcccccceeec-cchhhh
Confidence 9999999999999999999998 887753
No 22
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=9.4e-79 Score=694.89 Aligned_cols=670 Identities=24% Similarity=0.274 Sum_probs=519.2
Q ss_pred HHHhcCCCccCCCCCcc---HHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHH
Q 004437 36 RRERYGWNELDKEKGKP---LWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVG 112 (753)
Q Consensus 36 r~~~yG~N~i~~~~~~~---~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~ 112 (753)
+...|-.|.|...|++. +++++++||+++.|++|++++++++++ +. + ...|...+.+++++.++.+.+
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~-~-------~~~~~~~~pl~~vl~~t~iKd 98 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS-P-------FNPYTTLVPLLFVLGITAIKD 98 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc-c-------cCccceeeceeeeehHHHHHH
Confidence 55699999999988875 689999999999999999999999998 33 2 224556666777788888889
Q ss_pred HHhhhHHHHHHHHHHhhcccccEEEeCCe-eeeeecCCCCCCCcEEEecCCCcccccEEEEEee--CCcEEEEcccccCC
Q 004437 113 VWQESNAEKALEALKKIQCESGKVLRDGY-LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALK--TSSLRVEQSSLTGE 189 (753)
Q Consensus 113 ~~~e~~~~~~~~~l~~~~~~~~~V~R~g~-~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~--s~~~~Vdes~ltGE 189 (753)
.++++|+.+...+++ ..++.|+|++. + .+..|++|++||+|.+..++.+|||.++++++ +|.|+|++++|+||
T Consensus 99 ~~eD~rR~~~D~~iN---~~~~~v~~~~~~~-~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGE 174 (1151)
T KOG0206|consen 99 AIEDYRRHKQDKEVN---NRKVEVLRGDGCF-VEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGE 174 (1151)
T ss_pred HHhhhhhhhccHHhh---cceeEEecCCcee-eeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCc
Confidence 999998888776555 56788998654 5 56999999999999999999999999998753 46699999999999
Q ss_pred CCccccCCCCCcCC---------------------------------ccc-ccccccEEEeecEEEee-eEEEEEEEEcc
Q 004437 190 AMPILKGTSPVFLD---------------------------------DCE-LQAKENMVFAGTTVVNG-SCVCIVINTGM 234 (753)
Q Consensus 190 s~pv~K~~~~~~~~---------------------------------~~~-~~~~~~~l~~Gt~v~~g-~~~~~V~~tG~ 234 (753)
++.+.|........ ... +...++++++|+++.++ ++.++|+.||+
T Consensus 175 tnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~ 254 (1151)
T KOG0206|consen 175 TNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGH 254 (1151)
T ss_pred cccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCC
Confidence 99999975432111 001 55668899999999998 79999999999
Q ss_pred chhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--CCCCcccccchhhHHHHHH
Q 004437 235 NTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVV--DGWPANVQFSFEKCTYYFK 312 (753)
Q Consensus 235 ~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~ 312 (753)
+|++++.... ...+++++++.++.....++.+.++++++..+....+....... ..|-.............|.
T Consensus 255 dtK~~~n~~~-----~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 329 (1151)
T KOG0206|consen 255 DTKLMQNSGK-----PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFL 329 (1151)
T ss_pred cchHHHhcCC-----CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHH
Confidence 9999876532 36788999999999888888777777777665533222110000 0110000001223355677
Q ss_pred HHHHHHHHhccCChhHHHHHHHHHHHHHHh----------ccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEE
Q 004437 313 IAVALAVAAIPEGLPAVITTCLALGTRKMA----------QKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFF 382 (753)
Q Consensus 313 ~~i~llv~~iP~~L~~~~~~~~~~~~~~l~----------k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~ 382 (753)
.++.++...+|.+|++.+.+.....+..+. ...+.+|+.+..|+||+|++|++|||||||+|.|.+.++.
T Consensus 330 t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCs 409 (1151)
T KOG0206|consen 330 TFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCS 409 (1151)
T ss_pred HHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeeccc
Confidence 788888999999999999988877764432 3568899999999999999999999999999999999999
Q ss_pred EcCcccceeeeeee---c-Cc----------ccCCCCCCcccCCC--CCccHHHHHHHHHHhhccCCeeecCC---Ccce
Q 004437 383 TLGRKTTISRIFHV---E-GT----------TYDPKDGGIVDWPC--YNMDANLQAMAKICAVCNDAGVYCDG---PLFR 443 (753)
Q Consensus 383 ~~~~~~~~~~~~~~---~-~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~c~~~~~~~~~---~~~~ 443 (753)
+.+..|+....... . .. ...-.+....+... ....+....+..++++||+..++.++ ...+
T Consensus 410 i~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y 489 (1151)
T KOG0206|consen 410 INGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSY 489 (1151)
T ss_pred ccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceee
Confidence 99887764422100 0 00 00000001111011 12345678899999999998887732 3467
Q ss_pred ecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCC
Q 004437 444 ATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTG 523 (753)
Q Consensus 444 ~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~ 523 (753)
...+|+|.|++..|+.+|+.+..+..+..+.... + ..+.++++..++|+|.|||||||||.++|
T Consensus 490 ~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~------------g----~~~~y~lL~iLeF~S~RKRMSVIVR~p~g 553 (1151)
T KOG0206|consen 490 EAESPDEAALVEAARELGFVFLGRTPDSVTIREL------------G----VEETYELLNVLEFNSTRKRMSVIVRDPDG 553 (1151)
T ss_pred ecCCCcHHHHHHHHHhcCceeeeccCceEEEecc------------c----cceeEEEEEEeccccccceeEEEEEcCCC
Confidence 7789999999999999999998776554322210 0 25689999999999999999999999999
Q ss_pred eEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEec-cccccccccccCcccccccC
Q 004437 524 HNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKD-ELGEFSDYYSESHPAHKKLL 602 (753)
Q Consensus 524 ~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~-~~~~~~~~~~~~~~~~~~~~ 602 (753)
+..+|||||+.+|.++++. -..+.+++...++++|+.+|+|||++|||. .+++|..|.+.+..+.....
T Consensus 554 ~i~LycKGADsvI~erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~ 623 (1151)
T KOG0206|consen 554 RILLYCKGADSVIFERLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLT 623 (1151)
T ss_pred cEEEEEcCcchhhHhhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999875 234557788889999999999999999999 45668888877765544443
Q ss_pred C-----CcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc-------
Q 004437 603 D-----PSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED------- 670 (753)
Q Consensus 603 ~-----~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~------- 670 (753)
+ ....+.+|+||+++|..++||+++++++++|+.|++||||+|++|||..+||.+|+..|++..++..
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~ 703 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTE 703 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecC
Confidence 3 2356688999999999999999999999999999999999999999999999999999999875321
Q ss_pred ------------------------------------cccccccchhhhccCHH----HHHHHHHhcCCeEEEeeCchhHH
Q 004437 671 ------------------------------------LTGRSFTGKEFMALSST----QQIEALSKHGGKVFSRAEPRHKQ 710 (753)
Q Consensus 671 ------------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~p~~K~ 710 (753)
-...++.|+.+....+. .+.+....|..+++||++|.||.
T Consensus 704 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA 783 (1151)
T KOG0206|consen 704 TSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKA 783 (1151)
T ss_pred ChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHH
Confidence 11234556655433333 34456678889999999999999
Q ss_pred HHHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 711 EIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 711 ~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.+|+..++. +..+++||||+||++|++.||||| ||+|.|
T Consensus 784 ~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGV--GIsG~E 823 (1151)
T KOG0206|consen 784 LVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGV--GISGQE 823 (1151)
T ss_pred HHHHHHHhcCCceEEEeeCCCccchheeeCCcCe--eeccch
Confidence 999999755 889999999999999999999999 777765
No 23
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-78 Score=630.99 Aligned_cols=648 Identities=23% Similarity=0.305 Sum_probs=491.2
Q ss_pred HHHHhcCCCccCCCCCcc---HHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhh-HHHHHHHHHH
Q 004437 35 KRRERYGWNELDKEKGKP---LWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLV-IVLILVLNAI 110 (753)
Q Consensus 35 ~r~~~yG~N~i~~~~~~~---~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~i~~~ 110 (753)
.++++|.+|.+.+.|++. ++..+++||+-+++++|++.++.++++.+..+. ...|+.+++ ++++.++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~------l~ty~~pl~fvl~itl~--- 144 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY------LSTYWGPLGFVLTITLI--- 144 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc------hhhhhHHHHHHHHHHHH---
Confidence 567788899999887764 678999999999999999999999988764432 223444444 3333334
Q ss_pred HHHHhhhHHHHHHHHHHhhcccccEEE-eCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEe--eCCcEEEEccccc
Q 004437 111 VGVWQESNAEKALEALKKIQCESGKVL-RDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAAL--KTSSLRVEQSSLT 187 (753)
Q Consensus 111 ~~~~~e~~~~~~~~~l~~~~~~~~~V~-R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~--~s~~~~Vdes~lt 187 (753)
.+.+.+.++.+.....+ .+..+++ |+|-. . .++++|++||+|.++.+++||||++++.. .+|+|++.+..|+
T Consensus 145 keavdd~~r~~rd~~~N---se~y~~ltr~~~~-~-~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 145 KEAVDDLKRRRRDRELN---SEKYTKLTRDGTR-R-EPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHhhhhhh---hhhheeeccCCcc-c-ccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 34444444333333332 3333444 67665 3 59999999999999999999999999976 3678999999999
Q ss_pred CCCCccccCCCCCcCC----------------------------------cccccccccEEEeecEEEeeeEEEEEEEEc
Q 004437 188 GEAMPILKGTSPVFLD----------------------------------DCELQAKENMVFAGTTVVNGSCVCIVINTG 233 (753)
Q Consensus 188 GEs~pv~K~~~~~~~~----------------------------------~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG 233 (753)
||+..+.|-+.|..+. ..+.++-+|.++++|.+.+|.++|+|++||
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG 299 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTG 299 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEec
Confidence 9999988877643210 012345589999999999999999999999
Q ss_pred cchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHH
Q 004437 234 MNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKI 313 (753)
Q Consensus 234 ~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (753)
.+|... ++.+..+.+-.-++..+|.+.++++.++++++++.....- ..+.| ...+.+
T Consensus 300 ~dtRsv-----MNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g-------~~~~w-----------yi~~~R 356 (1051)
T KOG0210|consen 300 RDTRSV-----MNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKG-------FGSDW-----------YIYIIR 356 (1051)
T ss_pred ccHHHH-----hccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhc-------CCCch-----------HHHHHH
Confidence 999762 2323334445556778888888888777777766544311 11233 345667
Q ss_pred HHHHHHHhccCChhHHHHHHHHHHHHHHhcc----ccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccc
Q 004437 314 AVALAVAAIPEGLPAVITTCLALGTRKMAQK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTT 389 (753)
Q Consensus 314 ~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~ 389 (753)
++.++...+|.+|-+.+.++...-.+.+... |.++|+....|+||++.++.+|||||||+|+|.+++++.....++
T Consensus 357 fllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s 436 (1051)
T KOG0210|consen 357 FLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYS 436 (1051)
T ss_pred HHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeecc
Confidence 7888899999999999999998877777653 678999999999999999999999999999999999998876554
Q ss_pred eeeeeeec---CcccCC--CCCC-cccCCCCCccHHHHHHHHHHhhccCCeeecCC--CcceecCCchHHHHHHHHHHcC
Q 004437 390 ISRIFHVE---GTTYDP--KDGG-IVDWPCYNMDANLQAMAKICAVCNDAGVYCDG--PLFRATGLPTEAALKVLVEKMG 461 (753)
Q Consensus 390 ~~~~~~~~---~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~--~~~~~~~~p~e~al~~~~~~~g 461 (753)
......+. .+.+.| .++. ............++++..++++||+.++..++ ..-++..+|+|.|++++.+..|
T Consensus 437 ~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VG 516 (1051)
T KOG0210|consen 437 AETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVG 516 (1051)
T ss_pred HhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecc
Confidence 33211110 011111 1111 11112234556788999999999999887665 4566778999999999999999
Q ss_pred CCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecC-CCeEEEEEcCChHHHHHhc
Q 004437 462 FPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP-TGHNQLLVKGSVESLLERS 540 (753)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~-~~~~~~~~KGa~e~il~~c 540 (753)
.....+......... .......|+++..|||+|+.|||++|||++ .++.+.|.|||+.+|...-
T Consensus 517 l~L~~Rd~~~itL~~---------------~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV 581 (1051)
T KOG0210|consen 517 LKLAKRDRHAITLRV---------------PLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV 581 (1051)
T ss_pred eEEeecccceEEEec---------------CCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc
Confidence 988776533222111 111256899999999999999999999987 5889999999998885542
Q ss_pred ccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccc-cccccccccCcccccccCCCc------ccccCCCC
Q 004437 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDEL-GEFSDYYSESHPAHKKLLDPS------CYSTIESD 613 (753)
Q Consensus 541 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~ 613 (753)
.. -+++++...+|+.+|+|++++|.|... ++|.++...++.+.-...+.. ....+|+|
T Consensus 582 q~---------------NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~d 646 (1051)
T KOG0210|consen 582 QY---------------NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERD 646 (1051)
T ss_pred cc---------------chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhh
Confidence 11 246677888999999999999999954 456666666665544433321 12267899
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccc---------------------
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT--------------------- 672 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~--------------------- 672 (753)
++++|+.|+||+++++++.+++.||+||||+||+|||..+||..+|+..++...+.++.
T Consensus 647 lelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k 726 (1051)
T KOG0210|consen 647 LELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRK 726 (1051)
T ss_pred hHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999988665432
Q ss_pred ---cccccchhhh---ccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEec
Q 004437 673 ---GRSFTGKEFM---ALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 673 ---~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
..++.|+.+. +..++++.++..++...++||++|.||+++++.+|++ |..|+++|||.||+.|+++||+||
T Consensus 727 ~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi-- 804 (1051)
T KOG0210|consen 727 TDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI-- 804 (1051)
T ss_pred CCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--
Confidence 3456676654 3345778888889989999999999999999999987 999999999999999999999999
Q ss_pred CCCCcc
Q 004437 746 GITGTE 751 (753)
Q Consensus 746 gi~g~~ 751 (753)
||-|.|
T Consensus 805 GI~gkE 810 (1051)
T KOG0210|consen 805 GIVGKE 810 (1051)
T ss_pred eeeccc
Confidence 777765
No 24
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-75 Score=620.03 Aligned_cols=630 Identities=23% Similarity=0.308 Sum_probs=451.4
Q ss_pred CCcccccCCHHHHHHHhCCCCCCCCCH-HHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhc
Q 004437 4 KPFPAWSWTVEQCLKEYNVKLDKGLSS-REVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYF 82 (753)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~GL~~-~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~ 82 (753)
.-|..-+.+.++.+-.|+.+ +|+.. .++..-.++||+|+...+ .++|-+++.+.-..|++.+..++..+++ +
T Consensus 141 ~~F~~~~fp~~~~~g~~~k~--~G~~~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWC----L 213 (1160)
T KOG0209|consen 141 GKFSRLTFPTDEPFGYFQKS--TGHEEESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWC----L 213 (1160)
T ss_pred cceeccccCcCCcchhhhhc--cCcchHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHH----h
Confidence 33444456666766677655 57764 466666677999999875 4667777777766665555554444444 3
Q ss_pred cCCCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhh--cccccEEEeCCeeeeeecCCCCCCCcEEEec
Q 004437 83 HSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI--QCESGKVLRDGYLVPDLPAIGLVPGDIVELG 160 (753)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~--~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~ 160 (753)
+. +||+++..+++++. ++.-.-.++.+.+.+++++ .+..+.|+|+++|+ .+.++||.|||+|.|.
T Consensus 214 De---------yWYySlFtLfMli~---fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~-~l~seeLlPgDvVSI~ 280 (1160)
T KOG0209|consen 214 DE---------YWYYSLFTLFMLIA---FEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWV-KLMSEELLPGDVVSIG 280 (1160)
T ss_pred HH---------HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcce-eccccccCCCceEEec
Confidence 22 46666665554443 2222223334555556655 34578999999995 6999999999999998
Q ss_pred C---CCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCc----ccccccccEEEeecEEE------------
Q 004437 161 V---GDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDD----CELQAKENMVFAGTTVV------------ 221 (753)
Q Consensus 161 ~---G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~----~~~~~~~~~l~~Gt~v~------------ 221 (753)
. ...||||.+++. |+|.|||++|||||.|..|.+....+.+ .+-.++.+++|.||.++
T Consensus 281 r~~ed~~vPCDllLL~---GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~ 357 (1160)
T KOG0209|consen 281 RGAEDSHVPCDLLLLR---GSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKT 357 (1160)
T ss_pred cCcccCcCCceEEEEe---cceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccC
Confidence 7 468999999987 9999999999999999999886654433 22334678999999998
Q ss_pred -eeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccc
Q 004437 222 -NGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300 (753)
Q Consensus 222 -~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (753)
+|.+.+.|++||.+|..|++.+.+..+ .++-|.-.+ -+.+|+++.++++++... |. |.....-+..
T Consensus 358 pDggc~a~VlrTGFeTSQGkLvRtilf~--aervTaNn~----Etf~FILFLlVFAiaAa~--Yv----wv~Gskd~~R- 424 (1160)
T KOG0209|consen 358 PDGGCVAYVLRTGFETSQGKLVRTILFS--AERVTANNR----ETFIFILFLLVFAIAAAG--YV----WVEGSKDPTR- 424 (1160)
T ss_pred CCCCeEEEEEeccccccCCceeeeEEec--ceeeeeccH----HHHHHHHHHHHHHHHhhh--eE----EEecccCcch-
Confidence 467999999999999999999988764 222232211 222333344444443322 11 1111111111
Q ss_pred ccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEE
Q 004437 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTE 380 (753)
Q Consensus 301 ~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~ 380 (753)
+-...|.-++.++...+|+-||+-++++...+...|+|.+++|..+-++.-+|+||+.|||||||||+..|.|.+
T Consensus 425 -----srYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~G 499 (1160)
T KOG0209|consen 425 -----SRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEG 499 (1160)
T ss_pred -----hhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEe
Confidence 111234445667888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHc
Q 004437 381 FFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKM 460 (753)
Q Consensus 381 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~ 460 (753)
+........ .....+..| .+-...++.||......+ ...|+|.|.|.++..
T Consensus 500 vag~~~~~~-----~~~~~s~~p-----------------~~t~~vlAscHsLv~le~----~lVGDPlEKA~l~~v--- 550 (1160)
T KOG0209|consen 500 VAGLSADEG-----ALTPASKAP-----------------NETVLVLASCHSLVLLED----KLVGDPLEKATLEAV--- 550 (1160)
T ss_pred cccccCCcc-----cccchhhCC-----------------chHHHHHHHHHHHHHhcC----cccCChHHHHHHHhc---
Confidence 864322100 000000111 112334566765433322 278999999987654
Q ss_pred CCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCC----CeEEEEEcCChHHH
Q 004437 461 GFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT----GHNQLLVKGSVESL 536 (753)
Q Consensus 461 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~----~~~~~~~KGa~e~i 536 (753)
|+.....+... .+ .......++.+++.|+|..|||||+++... -+++..+|||||.|
T Consensus 551 ~W~~~k~~~v~---------------p~----~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 551 GWNLEKKNSVC---------------PR----EGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred CcccccCcccC---------------CC----cCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 44333221100 00 000235678899999999999999997643 35788899999999
Q ss_pred HHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEE
Q 004437 537 LERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVF 616 (753)
Q Consensus 537 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 616 (753)
.++... .+..+++...+|+++|.||+|++||+...-... ......++++|+||+|
T Consensus 612 ~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~-----------q~rd~~Re~vEsdLtF 666 (1160)
T KOG0209|consen 612 QEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS-----------QVRDLKREDVESDLTF 666 (1160)
T ss_pred HHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchh-----------hhhhhhhhhhhhccee
Confidence 988653 346778889999999999999999985421100 0112357789999999
Q ss_pred EEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCC------------cc-------------
Q 004437 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNE------------DL------------- 671 (753)
Q Consensus 617 lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~------------~~------------- 671 (753)
.|++.|..|++++++++|+.|++.+++++|+|||++.||.++|+++||....- .+
T Consensus 667 aGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~ 746 (1160)
T KOG0209|consen 667 AGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPL 746 (1160)
T ss_pred eeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecC
Confidence 99999999999999999999999999999999999999999999999865310 00
Q ss_pred ------------ccccccchhhhccCHHH-HHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhh
Q 004437 672 ------------TGRSFTGKEFMALSSTQ-QIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKL 738 (753)
Q Consensus 672 ------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~ 738 (753)
...+++|+.+..+...+ +..++.+ ..||||+.|.||..++..+++.|+.++|+|||.||+.|||+
T Consensus 747 ~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h--v~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~ 824 (1160)
T KOG0209|consen 747 KPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPH--VWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQ 824 (1160)
T ss_pred CCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh--eeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhh
Confidence 12456777777666544 4455556 78999999999999999999999999999999999999999
Q ss_pred cCceEecCCCCc
Q 004437 739 ADIGVAMGITGT 750 (753)
Q Consensus 739 A~vgiamgi~g~ 750 (753)
||||||+= |+.
T Consensus 825 AhVGVALL-~~~ 835 (1160)
T KOG0209|consen 825 AHVGVALL-NNP 835 (1160)
T ss_pred cccceehh-cCC
Confidence 99999987 554
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-73 Score=630.52 Aligned_cols=458 Identities=29% Similarity=0.449 Sum_probs=379.7
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEe-CCeeeeeecCCCCCCCcEEEecCCCcccccEEEE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R-~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl 172 (753)
+|.++..+++++.+..+++.+...|+.+++++|.++.|+++++++ ||+ .++|+.++|++||+|.|+|||+||+||+|+
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~-~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~ 251 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGE-EEEVPVEEVQVGDIVLVRPGERIPVDGVVV 251 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCc-EEEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence 345566677777788888888888888999999999999997776 565 467999999999999999999999999999
Q ss_pred EeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCC
Q 004437 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (753)
Q Consensus 173 ~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~ 252 (753)
+ |...||||+|||||.|+.|.+ ++.||+||.+.+|.+...|+++|.+|.++++.++++++ +.
T Consensus 252 ~---G~s~vDeS~iTGEs~PV~k~~-------------Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~A--q~ 313 (713)
T COG2217 252 S---GSSSVDESMLTGESLPVEKKP-------------GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEA--QS 313 (713)
T ss_pred e---CcEEeecchhhCCCCCEecCC-------------CCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHH--hh
Confidence 8 888999999999999999998 88999999999999999999999999999999999998 78
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHH
Q 004437 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332 (753)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~ 332 (753)
+++|.|+..|+++.+|++.+++++++.|++++.. . ++ .+...+..++++++++|||+|.+++|+
T Consensus 314 ~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~-~------~~---------~~~~a~~~a~avLVIaCPCALgLAtP~ 377 (713)
T COG2217 314 SKAPIQRLADRVASYFVPVVLVIAALTFALWPLF-G------GG---------DWETALYRALAVLVIACPCALGLATPT 377 (713)
T ss_pred CCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHh-c------CC---------cHHHHHHHHHhheeeeCccHHHhHHHH
Confidence 8999999999999999998888888877753211 1 11 123467889999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCC
Q 004437 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP 412 (753)
Q Consensus 333 ~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (753)
++..++.+.+++|+++|+..++|.++++|+++||||||||+|+|.|.++...+. +
T Consensus 378 ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-----------------~-------- 432 (713)
T COG2217 378 AILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-----------------D-------- 432 (713)
T ss_pred HHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-----------------C--------
Confidence 999999999999999999999999999999999999999999999999875431 0
Q ss_pred CCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccc
Q 004437 413 CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCC 492 (753)
Q Consensus 413 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (753)
+..+..++..+. ..+.||...|+++.++..|......
T Consensus 433 ----e~~~L~laAalE--------------~~S~HPiA~AIv~~a~~~~~~~~~~------------------------- 469 (713)
T COG2217 433 ----EDELLALAAALE--------------QHSEHPLAKAIVKAAAERGLPDVED------------------------- 469 (713)
T ss_pred ----HHHHHHHHHHHH--------------hcCCChHHHHHHHHHHhcCCCCccc-------------------------
Confidence 111222222222 4567999999999888766221110
Q ss_pred cccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhcc
Q 004437 493 EWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKG 572 (753)
Q Consensus 493 ~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G 572 (753)
...+| .+.....+ +| ..+.-|++..+.+.-. ..+. ..+..+.+..+|
T Consensus 470 ---------~~~i~----G~Gv~~~v---~g--~~v~vG~~~~~~~~~~----------~~~~-----~~~~~~~~~~~G 516 (713)
T COG2217 470 ---------FEEIP----GRGVEAEV---DG--ERVLVGNARLLGEEGI----------DLPL-----LSERIEALESEG 516 (713)
T ss_pred ---------eeeec----cCcEEEEE---CC--EEEEEcCHHHHhhcCC----------Cccc-----hhhhHHHHHhcC
Confidence 11111 11222222 23 3455699887754310 0110 345567788899
Q ss_pred ceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCCh
Q 004437 573 LRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNK 652 (753)
Q Consensus 573 ~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~ 652 (753)
..++.++. |.+++|+++++|++|++++++|++|++.|++++|+|||+.
T Consensus 517 ~t~v~va~--------------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~ 564 (713)
T COG2217 517 KTVVFVAV--------------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNR 564 (713)
T ss_pred CeEEEEEE--------------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCH
Confidence 88877775 3479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCccc
Q 004437 653 STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVND 732 (753)
Q Consensus 653 ~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND 732 (753)
.+|..+|+++|| ..+++...|++|.++|+.||++|+.|+|+|||.||
T Consensus 565 ~~A~~iA~~lGI---------------------------------d~v~AellPedK~~~V~~l~~~g~~VamVGDGIND 611 (713)
T COG2217 565 RTAEAIAKELGI---------------------------------DEVRAELLPEDKAEIVRELQAEGRKVAMVGDGIND 611 (713)
T ss_pred HHHHHHHHHcCh---------------------------------HhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchh
Confidence 999999999999 47999999999999999999999999999999999
Q ss_pred HHHhhhcCceEecCCCCccCC
Q 004437 733 APALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 733 ~~~l~~A~vgiamgi~g~~~~ 753 (753)
+|+|.+|||||||| +|+|++
T Consensus 612 APALA~AdVGiAmG-~GtDvA 631 (713)
T COG2217 612 APALAAADVGIAMG-SGTDVA 631 (713)
T ss_pred HHHHhhcCeeEeec-CCcHHH
Confidence 99999999999999 899975
No 26
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.1e-69 Score=626.08 Aligned_cols=453 Identities=26% Similarity=0.405 Sum_probs=378.0
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAA 173 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~ 173 (753)
.|.++..+++++++..+++.+++.|+++.+++|.++.+++++|+|+|++ ++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~-~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGER-EEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEE-EEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 4667777888888999999999999999999999999999999999998 579999999999999999999999999998
Q ss_pred eeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCC
Q 004437 174 LKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253 (753)
Q Consensus 174 ~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~ 253 (753)
|.+.||||+|||||.|+.|.+ ++.||+||.+.+|.+.+.|+++|.+|.+|++.+.++++ +.+
T Consensus 284 ---g~~~vdes~lTGEs~Pv~k~~-------------Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a--~~~ 345 (741)
T PRK11033 284 ---PFASFDESALTGESIPVERAT-------------GEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEA--EER 345 (741)
T ss_pred ---CcEEeecccccCCCCCEecCC-------------CCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHh--hcc
Confidence 789999999999999999987 78999999999999999999999999999999999887 667
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHH
Q 004437 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTC 333 (753)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~ 333 (753)
++|+++.+++++.+++++++++++++|++++..+ ..+| ...+.+++++++++|||+|.+++|++
T Consensus 346 k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~-----~~~~-----------~~~i~~a~svlviacPcaL~latP~a 409 (741)
T PRK11033 346 RAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF-----AAPW-----------QEWIYRGLTLLLIGCPCALVISTPAA 409 (741)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCH-----------HHHHHHHHHHHHHhchhhhhhhhHHH
Confidence 8999999999999999999999998887642111 1112 23466789999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCC
Q 004437 334 LALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPC 413 (753)
Q Consensus 334 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (753)
+..++.+++|+|+++|+..++|.|+++|++|||||||||+|+|+|.++...+. ++
T Consensus 410 ~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--------------~~----------- 464 (741)
T PRK11033 410 ITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG--------------IS----------- 464 (741)
T ss_pred HHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC--------------CC-----------
Confidence 99999999999999999999999999999999999999999999999865321 00
Q ss_pred CCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccc
Q 004437 414 YNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCE 493 (753)
Q Consensus 414 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (753)
..+++..++... ....||.+.|+++++++.+..
T Consensus 465 ------~~~~l~~aa~~e-----------~~s~hPia~Ai~~~a~~~~~~------------------------------ 497 (741)
T PRK11033 465 ------ESELLALAAAVE-----------QGSTHPLAQAIVREAQVRGLA------------------------------ 497 (741)
T ss_pred ------HHHHHHHHHHHh-----------cCCCCHHHHHHHHHHHhcCCC------------------------------
Confidence 022222222111 234699999999988765432
Q ss_pred ccccccceeeeecCCCCCceEE-EEEe-cCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhc
Q 004437 494 WWTKRSKRVATLEFDRIRKSMS-VIVR-EPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSK 571 (753)
Q Consensus 494 ~~~~~~~~~~~~~F~s~~k~~s-viv~-~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 571 (753)
+||.++++.+. .-++ ..+|+. +..|+++.+.+ ++ +.+...++.+..+
T Consensus 498 -----------~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~ 546 (741)
T PRK11033 498 -----------IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------------LA----DAFAGQINELESA 546 (741)
T ss_pred -----------CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------------cc----HHHHHHHHHHHhC
Confidence 23333333332 1111 112332 33488877633 11 2344456788999
Q ss_pred cceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCC
Q 004437 572 GLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN 651 (753)
Q Consensus 572 G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~ 651 (753)
|+|++++|+ |.+++|+++|+|++|++++++|++|+++|++++|+|||+
T Consensus 547 g~~~v~va~--------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~ 594 (741)
T PRK11033 547 GKTVVLVLR--------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDN 594 (741)
T ss_pred CCEEEEEEE--------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 999999986 347999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcc
Q 004437 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN 731 (753)
Q Consensus 652 ~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~N 731 (753)
..+|..+|+++||. .+++..|++|..+|+.+++. +.|+|+|||.|
T Consensus 595 ~~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiN 639 (741)
T PRK11033 595 PRAAAAIAGELGID----------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGIN 639 (741)
T ss_pred HHHHHHHHHHcCCC----------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHH
Confidence 99999999999993 46678899999999999965 68999999999
Q ss_pred cHHHhhhcCceEecCCCCccC
Q 004437 732 DAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 732 D~~~l~~A~vgiamgi~g~~~ 752 (753)
|+|||+.|||||||| +|+|+
T Consensus 640 DapAl~~A~vgia~g-~~~~~ 659 (741)
T PRK11033 640 DAPAMKAASIGIAMG-SGTDV 659 (741)
T ss_pred hHHHHHhCCeeEEec-CCCHH
Confidence 999999999999999 89875
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.3e-67 Score=590.81 Aligned_cols=426 Identities=42% Similarity=0.622 Sum_probs=368.2
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHh--hcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEE
Q 004437 103 LILVLNAIVGVWQESNAEKALEALKK--IQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180 (753)
Q Consensus 103 ~~~~i~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~ 180 (753)
+++++..+++.++++++++.++.+.+ ..+++++|+|+| + +.|++++|+|||+|.+++||.|||||+|++ |.+.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~-~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~ 78 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-W-KEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCF 78 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-e-EEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEE
Confidence 34556667889999999999999988 788899999999 6 569999999999999999999999999998 7999
Q ss_pred EEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHH
Q 004437 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKK 260 (753)
Q Consensus 181 Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~ 260 (753)
||||+|||||.|+.|.+ ++.+|+||.+.+|.+.+.|+++|.+|..+++...+..+ ...+++++++
T Consensus 79 vdes~LTGEs~pv~k~~-------------g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~--~~~k~~~~~~ 143 (499)
T TIGR01494 79 VDESNLTGESVPVLKTA-------------GDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTG--FETKTPLQPK 143 (499)
T ss_pred EEcccccCCCCCeeecc-------------CCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhc--CCCCCchHHH
Confidence 99999999999999987 67899999999999999999999999999999988765 4557889999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 004437 261 LDEFG-NRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTR 339 (753)
Q Consensus 261 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~ 339 (753)
.+++. .++++++++++++++++++..+.. . ..+...+.+++++++++|||+|++++++++..+..
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~~~----~----------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~ 209 (499)
T TIGR01494 144 LDRLSDIIFILFVLLIALAVFLFWAIGLWD----P----------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDA 209 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----c----------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 99998 788877777777666553211100 0 01245688899999999999999999999999999
Q ss_pred HHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHH
Q 004437 340 KMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDAN 419 (753)
Q Consensus 340 ~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (753)
+|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.
T Consensus 210 ~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------- 256 (499)
T TIGR01494 210 RLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------- 256 (499)
T ss_pred HHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------------------------
Confidence 99999999999999999999999999999999999999999865321
Q ss_pred HHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccccccccc
Q 004437 420 LQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRS 499 (753)
Q Consensus 420 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (753)
.+..+||.+.|++.++++.
T Consensus 257 ----------------------~~~s~hp~~~ai~~~~~~~--------------------------------------- 275 (499)
T TIGR01494 257 ----------------------EYLSGHPDERALVKSAKWK--------------------------------------- 275 (499)
T ss_pred ----------------------CcCCCChHHHHHHHHhhhc---------------------------------------
Confidence 0234699999999877531
Q ss_pred ceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEE
Q 004437 500 KRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMA 579 (753)
Q Consensus 500 ~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A 579 (753)
.+...||++.+++|+++++..++ .|+||+++.+.+.|.. +.+...+++++|+|++++|
T Consensus 276 -~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------------~~~~~~~~~~~g~~~~~~a 333 (499)
T TIGR01494 276 -ILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------------LEEKVKELAQSGLRVLAVA 333 (499)
T ss_pred -CcceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH------------------HHHHHHHHHhCCCEEEEEE
Confidence 11356999999999999986333 4789999999998852 1223445778999999999
Q ss_pred EeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 004437 580 YKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659 (753)
Q Consensus 580 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia 659 (753)
++. +++|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|
T Consensus 334 ~~~--------------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia 381 (499)
T TIGR01494 334 SKE--------------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIA 381 (499)
T ss_pred ECC--------------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 742 689999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhc
Q 004437 660 RQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLA 739 (753)
Q Consensus 660 ~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A 739 (753)
+++|+ +++.+|++|.++|+.+|+.|+.|+|+|||.||+|||++|
T Consensus 382 ~~lgi------------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~A 425 (499)
T TIGR01494 382 KELGI------------------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKA 425 (499)
T ss_pred HHcCc------------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhC
Confidence 99986 477899999999999999999999999999999999999
Q ss_pred CceEecC
Q 004437 740 DIGVAMG 746 (753)
Q Consensus 740 ~vgiamg 746 (753)
|||||||
T Consensus 426 dvgia~~ 432 (499)
T TIGR01494 426 DVGIAMG 432 (499)
T ss_pred CCccccc
Confidence 9999997
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-68 Score=581.33 Aligned_cols=474 Identities=25% Similarity=0.393 Sum_probs=380.6
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHH----HHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNA----EKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADM 169 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~----~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~ 169 (753)
.|++...+++.++. ++.|.|.++ ...+.+|-.+.+.++.++.+|+..++|+.+.|.+||+|+|.||++||+||
T Consensus 339 tfFdt~~MLi~fi~---lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG 415 (951)
T KOG0207|consen 339 TFFDTSPMLITFIT---LGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDG 415 (951)
T ss_pred hhccccHHHHHHHH---HHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCcccccc
Confidence 45555444444433 555666554 46777888888999999999963357999999999999999999999999
Q ss_pred EEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhc
Q 004437 170 RVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDAS 249 (753)
Q Consensus 170 ~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~ 249 (753)
+|++ |+++||||++|||+.|+.|++ ++.|.+||.+.+|.....++++|.+|.+++|.+++++|
T Consensus 416 ~Vv~---Gss~VDEs~iTGEs~PV~Kk~-------------gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEA- 478 (951)
T KOG0207|consen 416 VVVD---GSSEVDESLITGESMPVPKKK-------------GSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEA- 478 (951)
T ss_pred EEEe---CceeechhhccCCceecccCC-------------CCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHH-
Confidence 9998 899999999999999999998 88999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhH
Q 004437 250 LEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFL-SWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPA 328 (753)
Q Consensus 250 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~ 328 (753)
+..++|+|+.+|+++.+|+++++++++..|+++..... .......| +..+...|..++++++++|||+|.+
T Consensus 479 -Q~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~-------~~~~~~a~~~aisVlviACPCaLgL 550 (951)
T KOG0207|consen 479 -QLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSF-------FDAFSHAFQLAISVLVIACPCALGL 550 (951)
T ss_pred -HcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchh-------hHHHHHHHHhhheEEEEECchhhhc
Confidence 77899999999999999999999998887776442221 10111112 2556678889999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCc
Q 004437 329 VITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGI 408 (753)
Q Consensus 329 ~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (753)
+.|++...++...+++|+++|..+.+|.+.+|++++||||||||+|++.|.++......
T Consensus 551 ATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~--------------------- 609 (951)
T KOG0207|consen 551 ATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP--------------------- 609 (951)
T ss_pred CCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc---------------------
Confidence 99999999999999999999999999999999999999999999999999998765421
Q ss_pred ccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccc
Q 004437 409 VDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVR 488 (753)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (753)
-..++++.+.+-. ...+.||...|+..+++.........
T Consensus 610 ---------~~~~e~l~~v~a~-----------Es~SeHPig~AIv~yak~~~~~~~~~--------------------- 648 (951)
T KOG0207|consen 610 ---------ISLKEALALVAAM-----------ESGSEHPIGKAIVDYAKEKLVEPNPE--------------------- 648 (951)
T ss_pred ---------ccHHHHHHHHHHH-----------hcCCcCchHHHHHHHHHhcccccCcc---------------------
Confidence 0123333322211 13456999999999998766211100
Q ss_pred cccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHh
Q 004437 489 LGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEM 568 (753)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 568 (753)
..+..-.|..+.....+.+. ++. .+-|+-+.+.+. |... .+++++..++.
T Consensus 649 -----------~~~~~~~~pg~g~~~~~~~~---~~~--i~iGN~~~~~r~--------~~~~------~~~i~~~~~~~ 698 (951)
T KOG0207|consen 649 -----------GVLSFEYFPGEGIYVTVTVD---GNE--VLIGNKEWMSRN--------GCSI------PDDILDALTES 698 (951)
T ss_pred -----------ccceeecccCCCcccceEEe---eeE--EeechHHHHHhc--------CCCC------chhHHHhhhhH
Confidence 01111112222222222222 121 556888877553 2111 23466777778
Q ss_pred hhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEc
Q 004437 569 SSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVIT 648 (753)
Q Consensus 569 ~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~T 648 (753)
..+|..+..++. |.+++|++.++|++|+++..+|+.|++.|++++|+|
T Consensus 699 e~~g~tvv~v~v--------------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLT 746 (951)
T KOG0207|consen 699 ERKGQTVVYVAV--------------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLT 746 (951)
T ss_pred hhcCceEEEEEE--------------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEc
Confidence 889999998886 457999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcC
Q 004437 649 GDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728 (753)
Q Consensus 649 Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GD 728 (753)
||+..+|+++|+++|+ ..|++...|+||.+.|+.+|++++.|+|+||
T Consensus 747 GDn~~aA~svA~~VGi---------------------------------~~V~aev~P~~K~~~Ik~lq~~~~~VaMVGD 793 (951)
T KOG0207|consen 747 GDNDAAARSVAQQVGI---------------------------------DNVYAEVLPEQKAEKIKEIQKNGGPVAMVGD 793 (951)
T ss_pred CCCHHHHHHHHHhhCc---------------------------------ceEEeccCchhhHHHHHHHHhcCCcEEEEeC
Confidence 9999999999999997 5799999999999999999999999999999
Q ss_pred CcccHHHhhhcCceEecCCCCccCC
Q 004437 729 GVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 729 g~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|.||+|+|.+|||||||| .|+|+|
T Consensus 794 GINDaPALA~AdVGIaig-~gs~vA 817 (951)
T KOG0207|consen 794 GINDAPALAQADVGIAIG-AGSDVA 817 (951)
T ss_pred CCCccHHHHhhccceeec-cccHHH
Confidence 999999999999999999 889875
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.6e-67 Score=591.31 Aligned_cols=460 Identities=28% Similarity=0.400 Sum_probs=377.3
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCC-eeeeeecCCCCCCCcEEEecCCCcccccEEEE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDG-YLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g-~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl 172 (753)
.|.++..++++++++.+++.++++|+++.+++|.+..+.+++|+|+| ++ +++++++|+|||+|.+++||.|||||+|+
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi 95 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSE-EEVPVEELQVGDIVIVRPGERIPVDGVVI 95 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEeccceEEE
Confidence 46778889999999999999999999999999999999999999996 87 56999999999999999999999999999
Q ss_pred EeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCC
Q 004437 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (753)
Q Consensus 173 ~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~ 252 (753)
+ |.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|++||.+|.+|++.+.++++ ..
T Consensus 96 ~---g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~--~~ 157 (556)
T TIGR01525 96 S---GESEVDESALTGESMPVEKKE-------------GDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA--QS 157 (556)
T ss_pred e---cceEEeehhccCCCCCEecCC-------------cCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH--hh
Confidence 8 789999999999999999987 78999999999999999999999999999999998776 56
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHH
Q 004437 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332 (753)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~ 332 (753)
+++|+++.+++++.+++++++++++++|++++... .+ ..+.+++++++++|||+|++++++
T Consensus 158 ~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-------~~------------~~~~~~~~vlv~~~P~al~l~~~~ 218 (556)
T TIGR01525 158 SKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-------AL------------GALYRALAVLVVACPCALGLATPV 218 (556)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cc------------hHHHHHHHHHhhccccchhehhHH
Confidence 78999999999999999998888888777643110 00 356778999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCC
Q 004437 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP 412 (753)
Q Consensus 333 ~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (753)
++..++++|+++|+++|+++++|.||++|++|||||||||+|+|+|.++...+... .
T Consensus 219 ~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~---------- 275 (556)
T TIGR01525 219 AILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------I---------- 275 (556)
T ss_pred HHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------c----------
Confidence 99999999999999999999999999999999999999999999999987543210 0
Q ss_pred CCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccc
Q 004437 413 CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCC 492 (753)
Q Consensus 413 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (753)
...+++..++.+. ....||.+.|+++++++.|..... .
T Consensus 276 ------~~~~~l~~a~~~e-----------~~~~hp~~~Ai~~~~~~~~~~~~~-~------------------------ 313 (556)
T TIGR01525 276 ------SEEELLALAAALE-----------QSSSHPLARAIVRYAKKRGLELPK-Q------------------------ 313 (556)
T ss_pred ------cHHHHHHHHHHHh-----------ccCCChHHHHHHHHHHhcCCCccc-c------------------------
Confidence 0122232222221 234699999999999876543210 0
Q ss_pred cccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhcc
Q 004437 493 EWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKG 572 (753)
Q Consensus 493 ~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G 572 (753)
+ ....+| .++....++ |. ..+..|+++.+ +. ++. + ...+...+..+.++|
T Consensus 314 ------~-~~~~~~----~~gi~~~~~---g~-~~~~lg~~~~~-~~-------~~~----~---~~~~~~~~~~~~~~g 363 (556)
T TIGR01525 314 ------E-DVEEVP----GKGVEATVD---GQ-EEVRIGNPRLL-EL-------AAE----P---ISASPDLLNEGESQG 363 (556)
T ss_pred ------c-CeeEec----CCeEEEEEC---Ce-eEEEEecHHHH-hh-------cCC----C---chhhHHHHHHHhhCC
Confidence 0 001111 122222221 21 23445777655 11 010 0 111234556778899
Q ss_pred ceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCC-CeEEEEcCCC
Q 004437 573 LRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAG-IEVMVITGDN 651 (753)
Q Consensus 573 ~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~g-i~v~i~TGd~ 651 (753)
+|++.++. |.+++|.+.++|+++|+++++|++|+++| ++++|+|||+
T Consensus 364 ~~~~~v~~--------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~ 411 (556)
T TIGR01525 364 KTVVFVAV--------------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDN 411 (556)
T ss_pred cEEEEEEE--------------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCC
Confidence 99998885 34799999999999999999999999999 9999999999
Q ss_pred hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcc
Q 004437 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN 731 (753)
Q Consensus 652 ~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~N 731 (753)
..++..+++++|+ ..+|++..|++|..+++.+++.++.|+|+|||.|
T Consensus 412 ~~~a~~i~~~lgi---------------------------------~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~n 458 (556)
T TIGR01525 412 RSAAEAVAAELGI---------------------------------DEVHAELLPEDKLAIVKELQEEGGVVAMVGDGIN 458 (556)
T ss_pred HHHHHHHHHHhCC---------------------------------CeeeccCCHHHHHHHHHHHHHcCCEEEEEECChh
Confidence 9999999999999 3688899999999999999999999999999999
Q ss_pred cHHHhhhcCceEecCCCCccC
Q 004437 732 DAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 732 D~~~l~~A~vgiamgi~g~~~ 752 (753)
|++|++.||+||+|| ++++.
T Consensus 459 D~~al~~A~vgia~g-~~~~~ 478 (556)
T TIGR01525 459 DAPALAAADVGIAMG-AGSDV 478 (556)
T ss_pred HHHHHhhCCEeEEeC-CCCHH
Confidence 999999999999999 87763
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=6.5e-66 Score=579.57 Aligned_cols=443 Identities=27% Similarity=0.442 Sum_probs=364.0
Q ss_pred cchhhhh-HHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeC-CeeeeeecCCCCCCCcEEEecCCCcccccEEE
Q 004437 94 DYVEPLV-IVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRD-GYLVPDLPAIGLVPGDIVELGVGDKVPADMRV 171 (753)
Q Consensus 94 ~~~~~~~-i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~-g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~v 171 (753)
.|++... +++++.+..+++.+.++|+++.+++|.+..+++++++|+ |.+ ++|++++|+|||+|.|++||+|||||+|
T Consensus 52 ~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~-~~v~~~~l~~GDii~v~~Ge~iP~Dg~v 130 (562)
T TIGR01511 52 TFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSI-EEVPVALLQPGDIVKVLPGEKIPVDGTV 130 (562)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEecCceEE
Confidence 3555554 556666777888888889999999999999999999986 555 5699999999999999999999999999
Q ss_pred EEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccC
Q 004437 172 AALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLE 251 (753)
Q Consensus 172 l~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~ 251 (753)
++ |.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|+++|.+|.+|++.+.++++ +
T Consensus 131 ~~---g~~~vdes~lTGEs~pv~k~~-------------gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a--~ 192 (562)
T TIGR01511 131 IE---GESEVDESLVTGESLPVPKKV-------------GDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQA--Q 192 (562)
T ss_pred EE---CceEEehHhhcCCCCcEEcCC-------------CCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHH--H
Confidence 98 789999999999999999987 78999999999999999999999999999999999877 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHH
Q 004437 252 ESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVIT 331 (753)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~ 331 (753)
.+++|+++.+++++.++++++++++++.++++. ..+.+++++++++|||+|++++|
T Consensus 193 ~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------------------~~~~~~~svlvvacPcaL~la~p 248 (562)
T TIGR01511 193 QSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------------------FALEFAVTVLIIACPCALGLATP 248 (562)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHhccchhhhHHH
Confidence 678999999999999999998888877766521 24667899999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccC
Q 004437 332 TCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDW 411 (753)
Q Consensus 332 ~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (753)
+++..++.+++++|+++|++.++|.|+++|++|||||||||+|+|.+.++...+.. .
T Consensus 249 ~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~--------------~--------- 305 (562)
T TIGR01511 249 TVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR--------------D--------- 305 (562)
T ss_pred HHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC--------------C---------
Confidence 99999999999999999999999999999999999999999999999998643210 0
Q ss_pred CCCCccHHHHHHHH-HHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccc
Q 004437 412 PCYNMDANLQAMAK-ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLG 490 (753)
Q Consensus 412 ~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (753)
. .+++. +++++. ...||.+.|+++++++.+.......
T Consensus 306 -----~---~~~l~~aa~~e~------------~s~HPia~Ai~~~~~~~~~~~~~~~---------------------- 343 (562)
T TIGR01511 306 -----R---TELLALAAALEA------------GSEHPLAKAIVSYAKEKGITLVEVS---------------------- 343 (562)
T ss_pred -----H---HHHHHHHHHHhc------------cCCChHHHHHHHHHHhcCCCcCCCC----------------------
Confidence 0 12222 223332 3459999999999987654321100
Q ss_pred cccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhh
Q 004437 491 CCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS 570 (753)
Q Consensus 491 ~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 570 (753)
....+| .+.+...+ +| ..+..|+++.+.+. +. .++ .+.+
T Consensus 344 ----------~~~~~~----g~Gi~~~~---~g--~~~~iG~~~~~~~~--------~~--~~~------------~~~~ 382 (562)
T TIGR01511 344 ----------DFKAIP----GIGVEGTV---EG--TKIQLGNEKLLGEN--------AI--KID------------GKAE 382 (562)
T ss_pred ----------CeEEEC----CceEEEEE---CC--EEEEEECHHHHHhC--------CC--CCC------------hhhh
Confidence 001111 22333333 22 23556998876432 10 011 1236
Q ss_pred ccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCC
Q 004437 571 KGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGD 650 (753)
Q Consensus 571 ~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd 650 (753)
+|.+++.++. |.+++|++.++|++||+++++|++|++.|++++|+|||
T Consensus 383 ~g~~~~~~~~--------------------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd 430 (562)
T TIGR01511 383 QGSTSVLVAV--------------------------------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGD 430 (562)
T ss_pred CCCEEEEEEE--------------------------------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCC
Confidence 7888877653 56899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCc
Q 004437 651 NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGV 730 (753)
Q Consensus 651 ~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ 730 (753)
+...+..+++++|+. ++++..|++|.++++.+++.++.|+|+|||.
T Consensus 431 ~~~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~ 476 (562)
T TIGR01511 431 NRKTAKAVAKELGIN----------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGI 476 (562)
T ss_pred CHHHHHHHHHHcCCc----------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 999999999999992 6777889999999999999999999999999
Q ss_pred ccHHHhhhcCceEecCCCCccC
Q 004437 731 NDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 731 ND~~~l~~A~vgiamgi~g~~~ 752 (753)
||++|++.||+||+|| +|+|+
T Consensus 477 nD~~al~~A~vgia~g-~g~~~ 497 (562)
T TIGR01511 477 NDAPALAQADVGIAIG-AGTDV 497 (562)
T ss_pred ccHHHHhhCCEEEEeC-CcCHH
Confidence 9999999999999999 88764
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.5e-66 Score=581.21 Aligned_cols=439 Identities=28% Similarity=0.450 Sum_probs=365.7
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAA 173 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~ 173 (753)
.|+++..++++++++.+++.++++|+++.++++.++.+++++|+|+|++ +++++++|+|||+|.+++||+|||||+|++
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~ 95 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSL-EEVAVEELKVGDVVVVKPGERVPVDGVVLS 95 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEE-EEEEHHHCCCCCEEEEcCCCEeecceEEEe
Confidence 4788888889999999999999999999999999999999999999999 579999999999999999999999999998
Q ss_pred eeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCC
Q 004437 174 LKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253 (753)
Q Consensus 174 ~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~ 253 (753)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|++||.+|.+|++.+.++++ ...
T Consensus 96 ---g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~--~~~ 157 (536)
T TIGR01512 96 ---GTSTVDESALTGESVPVEKAP-------------GDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA--QSR 157 (536)
T ss_pred ---CcEEEEecccCCCCCcEEeCC-------------CCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHH--hhC
Confidence 789999999999999999987 78999999999999999999999999999999998776 567
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHH
Q 004437 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTC 333 (753)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~ 333 (753)
++|+++.+++++.+++++++++++++|++++.. ..| ...+.+++++++++|||+|+++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----------~~~~~~~~svlv~~~P~aL~la~~~~ 219 (536)
T TIGR01512 158 KAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL-------KRW-----------PFWVYRALVLLVVASPCALVISAPAA 219 (536)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccc-----------HHHHHHHHHHHhhcCccccccchHHH
Confidence 899999999999999999988888777663311 111 12567789999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCC
Q 004437 334 LALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPC 413 (753)
Q Consensus 334 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (753)
+..++.+++++|+++|+++++|.+|++|++|||||||||+|+|+|.+++..
T Consensus 220 ~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~----------------------------- 270 (536)
T TIGR01512 220 YLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA----------------------------- 270 (536)
T ss_pred HHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-----------------------------
Confidence 999999999999999999999999999999999999999999999987521
Q ss_pred CCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccc
Q 004437 414 YNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCE 493 (753)
Q Consensus 414 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (753)
+++..++.+. ....||.+.|+++++++.+ +...
T Consensus 271 --------~~l~~a~~~e-----------~~~~hp~~~Ai~~~~~~~~-~~~~--------------------------- 303 (536)
T TIGR01512 271 --------EVLRLAAAAE-----------QASSHPLARAIVDYARKRE-NVES--------------------------- 303 (536)
T ss_pred --------HHHHHHHHHh-----------ccCCCcHHHHHHHHHHhcC-CCcc---------------------------
Confidence 1222222111 2346999999999887643 1100
Q ss_pred ccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccc
Q 004437 494 WWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGL 573 (753)
Q Consensus 494 ~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~ 573 (753)
...+| .+.+...+ +|.. +..|+++.+.+.. . ..+..+|.
T Consensus 304 --------~~~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~~------------~------------~~~~~~~~ 342 (536)
T TIGR01512 304 --------VEEVP----GEGVRAVV---DGGE--VRIGNPRSLEAAV------------G------------ARPESAGK 342 (536)
T ss_pred --------eEEec----CCeEEEEE---CCeE--EEEcCHHHHhhcC------------C------------cchhhCCC
Confidence 01111 12222222 2332 3358876553320 0 03455677
Q ss_pred eEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC-eEEEEcCCCh
Q 004437 574 RCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI-EVMVITGDNK 652 (753)
Q Consensus 574 rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi-~v~i~TGd~~ 652 (753)
+++.++ .|..++|.+.++|++|++++++|++|+++|+ +++|+|||+.
T Consensus 343 ~~~~v~--------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~ 390 (536)
T TIGR01512 343 TIVHVA--------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRR 390 (536)
T ss_pred eEEEEE--------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCH
Confidence 766554 2568999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCccc
Q 004437 653 STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVND 732 (753)
Q Consensus 653 ~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND 732 (753)
.++..+++++|+. .+|++..|++|..+++.++..++.|+|+|||.||
T Consensus 391 ~~a~~i~~~lgi~---------------------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD 437 (536)
T TIGR01512 391 AVAERVARELGID---------------------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGIND 437 (536)
T ss_pred HHHHHHHHHcCCh---------------------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 9999999999993 5788889999999999999999999999999999
Q ss_pred HHHhhhcCceEecCCCCcc
Q 004437 733 APALKLADIGVAMGITGTE 751 (753)
Q Consensus 733 ~~~l~~A~vgiamgi~g~~ 751 (753)
++|++.||+||+||.+|++
T Consensus 438 ~~al~~A~vgia~g~~~~~ 456 (536)
T TIGR01512 438 APALAAADVGIAMGASGSD 456 (536)
T ss_pred HHHHHhCCEEEEeCCCccH
Confidence 9999999999999955554
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.1e-64 Score=596.97 Aligned_cols=458 Identities=28% Similarity=0.405 Sum_probs=375.5
Q ss_pred cchh-hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEE
Q 004437 94 DYVE-PLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (753)
Q Consensus 94 ~~~~-~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl 172 (753)
.|++ +..+++++.+..+++.+.+.|+++.+++|.++.+++++++|+|++ ++|+.++|+|||+|.|++||+|||||+|+
T Consensus 284 ~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~-~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 284 LYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGE-KSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcE-EEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 3655 455667777888888888888899999999999999999999998 56999999999999999999999999999
Q ss_pred EeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCC
Q 004437 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (753)
Q Consensus 173 ~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~ 252 (753)
+ |.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.+.|+++|.+|.++++.++++++ +.
T Consensus 363 ~---g~~~vdeS~lTGEs~pv~k~~-------------gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a--~~ 424 (834)
T PRK10671 363 Q---GEAWLDEAMLTGEPIPQQKGE-------------GDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA--QS 424 (834)
T ss_pred E---ceEEEeehhhcCCCCCEecCC-------------CCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHH--hc
Confidence 8 789999999999999999988 78999999999999999999999999999999999887 56
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHH
Q 004437 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332 (753)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~ 332 (753)
.++|+++..++++.++++++++++++.+++++.. ..+ ..+.+.+.+++++++++|||+|++++|+
T Consensus 425 ~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~-------~~~--------~~~~~~~~~a~~vlv~acPcaL~la~p~ 489 (834)
T PRK10671 425 SKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF-------GPA--------PQIVYTLVIATTVLIIACPCALGLATPM 489 (834)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCc--------hHHHHHHHHHHHHHHHhcccchhhhHHH
Confidence 7899999999999999999888888776653211 111 1124567789999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCC
Q 004437 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP 412 (753)
Q Consensus 333 ~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (753)
++..++.+++++|+++|+.+++|.|+++|++|||||||||+|+|+|.++...+. ..
T Consensus 490 a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--------------~~---------- 545 (834)
T PRK10671 490 SIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG--------------VD---------- 545 (834)
T ss_pred HHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC--------------CC----------
Confidence 999999999999999999999999999999999999999999999998764321 00
Q ss_pred CCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccc
Q 004437 413 CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCC 492 (753)
Q Consensus 413 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (753)
.. +.+..+++++. ...||.+.|++++++.......
T Consensus 546 ----~~--~~l~~a~~~e~------------~s~hp~a~Ai~~~~~~~~~~~~--------------------------- 580 (834)
T PRK10671 546 ----EA--QALRLAAALEQ------------GSSHPLARAILDKAGDMTLPQV--------------------------- 580 (834)
T ss_pred ----HH--HHHHHHHHHhC------------CCCCHHHHHHHHHHhhCCCCCc---------------------------
Confidence 01 11222333332 3469999999987753211100
Q ss_pred cccccccceeeeecCCCCC-ceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhc
Q 004437 493 EWWTKRSKRVATLEFDRIR-KSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSK 571 (753)
Q Consensus 493 ~~~~~~~~~~~~~~F~s~~-k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 571 (753)
.+|.... +.+...+ +|+ .+..|+++.+.+.. ++ .+.+.+.++.+.++
T Consensus 581 ------------~~~~~~~g~Gv~~~~---~g~--~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~ 628 (834)
T PRK10671 581 ------------NGFRTLRGLGVSGEA---EGH--ALLLGNQALLNEQQ------------VD---TKALEAEITAQASQ 628 (834)
T ss_pred ------------ccceEecceEEEEEE---CCE--EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhC
Confidence 0111111 1122222 232 35569999774421 11 12345556778889
Q ss_pred cceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCC
Q 004437 572 GLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN 651 (753)
Q Consensus 572 G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~ 651 (753)
|.+++.+|+ |..++|++.+.|++|++++++|++|++.|++++|+|||+
T Consensus 629 g~~~v~va~--------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~ 676 (834)
T PRK10671 629 GATPVLLAV--------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDN 676 (834)
T ss_pred CCeEEEEEE--------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCC
Confidence 999999986 236899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcc
Q 004437 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN 731 (753)
Q Consensus 652 ~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~N 731 (753)
..++..+++++|+ ..++++..|++|.++++.++.+++.|+|+|||.|
T Consensus 677 ~~~a~~ia~~lgi---------------------------------~~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~n 723 (834)
T PRK10671 677 PTTANAIAKEAGI---------------------------------DEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGIN 723 (834)
T ss_pred HHHHHHHHHHcCC---------------------------------CEEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHH
Confidence 9999999999999 4688999999999999999999999999999999
Q ss_pred cHHHhhhcCceEecCCCCccC
Q 004437 732 DAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 732 D~~~l~~A~vgiamgi~g~~~ 752 (753)
|++|++.||+||||| +|+|.
T Consensus 724 D~~al~~Agvgia~g-~g~~~ 743 (834)
T PRK10671 724 DAPALAQADVGIAMG-GGSDV 743 (834)
T ss_pred HHHHHHhCCeeEEec-CCCHH
Confidence 999999999999999 88874
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-58 Score=469.57 Aligned_cols=505 Identities=24% Similarity=0.337 Sum_probs=387.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhh--hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcc-cccEEEe
Q 004437 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEP--LVIVLILVLNAIVGVWQESNAEKALEALKKIQC-ESGKVLR 138 (753)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~-~~~~V~R 138 (753)
++|.+++.++.++++.++.++.+..+.......|... +.+++.+++..+-+.+.|-|.+.+.+.|++.+. ..+++++
T Consensus 31 kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~ 110 (681)
T COG2216 31 KNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLR 110 (681)
T ss_pred hCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhc
Confidence 4677777777777776555544433222222222222 223444556666777788888888888876544 3566777
Q ss_pred C-CeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEee
Q 004437 139 D-GYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAG 217 (753)
Q Consensus 139 ~-g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~G 217 (753)
+ |.+ +.+++.+|+.||+|.+++||.||+||.|++ |.+.||||.+||||.||.|.+... -+-+-.|
T Consensus 111 ~~g~~-~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asVdESAITGESaPViresGgD----------~ssVtGg 176 (681)
T COG2216 111 ADGSI-EMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASVDESAITGESAPVIRESGGD----------FSSVTGG 176 (681)
T ss_pred CCCCe-eeccccccccCCEEEEecCCCccCCCeEEe---eeeecchhhccCCCcceeeccCCC----------cccccCC
Confidence 6 666 679999999999999999999999999999 899999999999999999987321 2458999
Q ss_pred cEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCC
Q 004437 218 TTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWP 297 (753)
Q Consensus 218 t~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (753)
|++++.|++..++....+|.+.++..+++.+ +.++||.+..++-+..-++++.+++....+-+.. |. . +-+
T Consensus 177 T~v~SD~l~irita~pG~sFlDrMI~LVEgA--~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~--y~---~--g~~ 247 (681)
T COG2216 177 TRVLSDWLKIRITANPGETFLDRMIALVEGA--ERQKTPNEIALTILLSGLTLIFLLAVATLYPFAI--YS---G--GGA 247 (681)
T ss_pred cEEeeeeEEEEEEcCCCccHHHHHHHHhhch--hccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHH--Hc---C--CCC
Confidence 9999999999999999999999999999887 7789998877665544444433333222222211 11 0 000
Q ss_pred cccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceE
Q 004437 298 ANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMS 377 (753)
Q Consensus 298 ~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~ 377 (753)
..+...+++++..+|-.+.-.++..-..++.|+.+.+++.++..++|..|.||++..|||||+|-|+-.
T Consensus 248 -----------~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~ 316 (681)
T COG2216 248 -----------ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQ 316 (681)
T ss_pred -----------cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchh
Confidence 123445788999999999998888888899999999999999999999999999999999999999877
Q ss_pred EEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHH
Q 004437 378 VTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLV 457 (753)
Q Consensus 378 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~ 457 (753)
-.++++.+. ...++++..+.++. .+...|.-.+++.++
T Consensus 317 A~~f~p~~g-------------------------------v~~~~la~aa~lsS-----------l~DeTpEGrSIV~LA 354 (681)
T COG2216 317 ASEFIPVPG-------------------------------VSEEELADAAQLAS-----------LADETPEGRSIVELA 354 (681)
T ss_pred hhheecCCC-------------------------------CCHHHHHHHHHHhh-----------hccCCCCcccHHHHH
Confidence 777665432 11255555555543 122367888999999
Q ss_pred HHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccc-eeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHH
Q 004437 458 EKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSK-RVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESL 536 (753)
Q Consensus 458 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~i 536 (753)
+++++...... .. ....+||+.+.+++++-... + ..+-||+++.+
T Consensus 355 ~~~~~~~~~~~------------------------------~~~~~~fvpFtA~TRmSGvd~~~--~--~~irKGA~dai 400 (681)
T COG2216 355 KKLGIELREDD------------------------------LQSHAEFVPFTAQTRMSGVDLPG--G--REIRKGAVDAI 400 (681)
T ss_pred HHhccCCCccc------------------------------ccccceeeecceecccccccCCC--C--ceeecccHHHH
Confidence 99885433211 11 23568999887666665432 2 56779999999
Q ss_pred HHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEE
Q 004437 537 LERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVF 616 (753)
Q Consensus 537 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 616 (753)
..+-... .+ ..++.++...++-++.|-..|+++. |.++
T Consensus 401 ~~~v~~~---~g-------~~p~~l~~~~~~vs~~GGTPL~V~~--------------------------------~~~~ 438 (681)
T COG2216 401 RRYVRER---GG-------HIPEDLDAAVDEVSRLGGTPLVVVE--------------------------------NGRI 438 (681)
T ss_pred HHHHHhc---CC-------CCCHHHHHHHHHHHhcCCCceEEEE--------------------------------CCEE
Confidence 9885521 11 1235567778888999999998874 4579
Q ss_pred EEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhc
Q 004437 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKH 696 (753)
Q Consensus 617 lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (753)
+|++.++|.++++.++-+.+||+.|||++|+||||+.||..||++.|++
T Consensus 439 ~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD------------------------------- 487 (681)
T COG2216 439 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------------------------- 487 (681)
T ss_pred EEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch-------------------------------
Confidence 9999999999999999999999999999999999999999999999994
Q ss_pred CCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 697 GGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 697 ~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
..++..+|++|.++|+.-|..|+-|+|+|||.||+|+|.+||||+||. +|+..
T Consensus 488 --dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqA 540 (681)
T COG2216 488 --DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQA 540 (681)
T ss_pred --hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHH
Confidence 578899999999999999999999999999999999999999999999 98753
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=9e-36 Score=300.65 Aligned_cols=228 Identities=33% Similarity=0.567 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccc-cEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcE
Q 004437 101 IVLILVLNAIVGVWQESNAEKALEALKKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSL 179 (753)
Q Consensus 101 i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~ 179 (753)
++++++++.+++.++++|+++.++++++..+++ ++|+|||++ +++++++|+|||||.|++||.+||||+|++ +|.+
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~-~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~ 78 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRW-QKIPSSELVPGDIIILKAGDIVPADGILLE--SGSA 78 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEE-EEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEecccc-ccchHhhccceeeeecccccccccCcccee--cccc
Confidence 566777888899999999999999999888877 999999999 579999999999999999999999999987 5899
Q ss_pred EEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHH
Q 004437 180 RVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRK 259 (753)
Q Consensus 180 ~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~ 259 (753)
+||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|+++++|++||.+|..|++.+.+.++ +.+++++++
T Consensus 79 ~vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~--~~~~~~~~~ 148 (230)
T PF00122_consen 79 YVDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKS--ESKKSPLER 148 (230)
T ss_dssp EEECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTS--CSS-THHHH
T ss_pred ccccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccc--cccchhhhh
Confidence 9999999999999999853 234489999999999999999999999999999999988665 456699999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 004437 260 KLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTR 339 (753)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~ 339 (753)
.++++..++.+++++++++++++++.. .. ...+...+..++++++.+||++||+++++++..+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~ 213 (230)
T PF00122_consen 149 KLNKIAKILIIIILAIAILVFIIWFFN----DS-----------GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAAR 213 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHTG----ST-----------TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhcccccchhhhccceec----cc-----------ccccccccccccceeeeecccceeehHHHHHHHHHH
Confidence 999999999988888888777553321 00 122245677889999999999999999999999999
Q ss_pred HHhccccccccchhhhh
Q 004437 340 KMAQKNAIVRKLPSVET 356 (753)
Q Consensus 340 ~l~k~~ilvk~~~~le~ 356 (753)
+|+++|+++|+++++|+
T Consensus 214 ~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 214 RLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHTTEEESSTTHHHH
T ss_pred HHHHCCEEEeCcccccC
Confidence 99999999999999985
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.88 E-value=1.3e-22 Score=202.71 Aligned_cols=97 Identities=49% Similarity=0.814 Sum_probs=91.7
Q ss_pred CeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHH
Q 004437 613 DLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEA 692 (753)
Q Consensus 613 ~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (753)
++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..++..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 568999999999999999999999999999999999999999999999999942
Q ss_pred HHhcCCeEEEee--CchhH--HHHHHHHHHcCCeEEEEcCCcccHHHhhhcC
Q 004437 693 LSKHGGKVFSRA--EPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLAD 740 (753)
Q Consensus 693 ~~~~~~~v~~~~--~p~~K--~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~ 740 (753)
..++++. +|++| .++++.|+..++.|+|+|||.||++|+++||
T Consensus 169 -----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 -----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -----ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 4699999 99999 9999999977779999999999999999997
No 36
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.57 E-value=6.5e-15 Score=116.90 Aligned_cols=69 Identities=45% Similarity=0.733 Sum_probs=66.2
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHH
Q 004437 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFIS 76 (753)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~ 76 (753)
||.++++++++.|+|+..+||+++|+++|+++||+|.++.++++++|+.++++|.+++++++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 899999999999999999999999999999999999999889999999999999999999999999875
No 37
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.52 E-value=2.2e-14 Score=120.22 Aligned_cols=88 Identities=40% Similarity=0.496 Sum_probs=70.3
Q ss_pred hhccCCeeecCCCc--ceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeee
Q 004437 428 AVCNDAGVYCDGPL--FRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATL 505 (753)
Q Consensus 428 ~~c~~~~~~~~~~~--~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (753)
++||++.+..+.+. ....|+|+|.||+.++.+.|...... ..+..+++++.+
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~--------------------------~~~~~~~~~~~~ 54 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIK--------------------------EIRSKYKIVAEI 54 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHH--------------------------HHHhhcceeEEE
Confidence 47999888655432 33899999999999999987543211 116788999999
Q ss_pred cCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhccc
Q 004437 506 EFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSH 542 (753)
Q Consensus 506 ~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~ 542 (753)
||+|+||||+++++ .++.+.+|+|||||.|+++|++
T Consensus 55 pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 55 PFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999999999998 3335677999999999999986
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.45 E-value=3e-13 Score=114.54 Aligned_cols=100 Identities=26% Similarity=0.411 Sum_probs=92.7
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHH
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
+...+.++---++-++++++|++|++. ++++++|||..-+....|+..|+..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--------------------------- 70 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--------------------------- 70 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce---------------------------
Confidence 356778888888999999999999999 9999999999999999999999853
Q ss_pred HhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 694 ~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
..+++...|+.|..+++.|+++++.|.|+|||.||.+||+.||+||..
T Consensus 71 ----~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~t 118 (152)
T COG4087 71 ----ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICT 118 (152)
T ss_pred ----eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEE
Confidence 579999999999999999999999999999999999999999999853
No 39
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.26 E-value=1.5e-11 Score=96.16 Aligned_cols=62 Identities=42% Similarity=0.575 Sum_probs=57.9
Q ss_pred HhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 004437 19 EYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILA 80 (753)
Q Consensus 19 ~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~ 80 (753)
.|++++.+||+++|+++|+++||+|+++.++.+++|+.++++|.+|++++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 57888888999999999999999999999888999999999999999999999999998763
No 40
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.00 E-value=1.3e-07 Score=101.24 Aligned_cols=213 Identities=20% Similarity=0.282 Sum_probs=140.6
Q ss_pred CChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccc--------cccccccccC--------
Q 004437 531 GSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDEL--------GEFSDYYSES-------- 594 (753)
Q Consensus 531 Ga~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~--------~~~~~~~~~~-------- 594 (753)
|-...+.+.|+.++++ ..+.|++...+.+.++...+-.-.| .+++||||... +.+.+.....
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 6678889999999863 4568999999988888777766666 58999999621 2222111000
Q ss_pred ----c------cccc--ccCCC--------cccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHH
Q 004437 595 ----H------PAHK--KLLDP--------SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKST 654 (753)
Q Consensus 595 ----~------~~~~--~~~~~--------~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~ 654 (753)
+ ++.. ...+. ......-.+..|+|++..+-+.+.+....|+.|-++-|+.+..+-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 0 0000 00010 01111224678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCccccc----------------------------------------cccchh-------hhccCHH
Q 004437 655 AEAICRQIKLFSGNEDLTGR----------------------------------------SFTGKE-------FMALSST 687 (753)
Q Consensus 655 a~~ia~~~gi~~~~~~~~~~----------------------------------------~~~~~~-------~~~~~~~ 687 (753)
.+-+|.++||..+...-.+. .+..++ |..+..
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds- 934 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS- 934 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc-
Confidence 99999999997643321100 000000 000000
Q ss_pred HHHHH-------------------HHhcC-----CeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCccc--HHHhhhcCc
Q 004437 688 QQIEA-------------------LSKHG-----GKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVND--APALKLADI 741 (753)
Q Consensus 688 ~~~~~-------------------~~~~~-----~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND--~~~l~~A~v 741 (753)
...+. +...+ .-.|..++|+.--+.|+.+|++|++++++|-..|- .-.+-+||+
T Consensus 935 di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 935 DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred chhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccce
Confidence 00000 00000 23677889999999999999999999999998884 335678899
Q ss_pred eEecC
Q 004437 742 GVAMG 746 (753)
Q Consensus 742 giamg 746 (753)
+||+-
T Consensus 1015 SialD 1019 (1354)
T KOG4383|consen 1015 SIALD 1019 (1354)
T ss_pred eEEec
Confidence 99874
No 41
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.97 E-value=1.8e-09 Score=111.27 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=39.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
+.+.++++|+++++.|++++++|||+...+..+.+++++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 89999999999999999999999999999999999999975
No 42
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.95 E-value=3.2e-09 Score=109.96 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=39.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+.++++|++|+++|++++++|||+...+..+++++++.
T Consensus 19 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 19 HTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 358899999999999999999999999999999999999975
No 43
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.95 E-value=2.4e-09 Score=110.88 Aligned_cols=42 Identities=14% Similarity=0.082 Sum_probs=39.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+.+.++++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 589999999999999999999999999999999999999863
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.94 E-value=3e-09 Score=107.28 Aligned_cols=126 Identities=23% Similarity=0.205 Sum_probs=83.5
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcccccc---------ccchhhh--------------
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS---------FTGKEFM-------------- 682 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~---------~~~~~~~-------------- 682 (753)
+.+.+.++|++|+++|++++++|||+...+..+++.+|+..+.....+.. +....+.
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 78999999999999999999999999999999999999864211000000 0000000
Q ss_pred ----------------------ccCHHHHHHHHHhcCC--e-----EEEeeCch--hHHHHHHHHHHc----CCeEEEEc
Q 004437 683 ----------------------ALSSTQQIEALSKHGG--K-----VFSRAEPR--HKQEIVRMLKEM----GEVVAMTG 727 (753)
Q Consensus 683 ----------------------~~~~~~~~~~~~~~~~--~-----v~~~~~p~--~K~~~v~~l~~~----~~~v~~~G 727 (753)
....++..+.+.+... . .+....|. .|...++.+.++ ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 0001112222222111 1 11233443 388888877665 35799999
Q ss_pred CCcccHHHhhhcCceEecCCCCccC
Q 004437 728 DGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 728 Dg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
|+.||.+|++.|++|+||| ||.+.
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~ 204 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEE 204 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHH
Confidence 9999999999999999999 99864
No 45
>PRK10976 putative hydrolase; Provisional
Probab=98.93 E-value=4.1e-09 Score=108.79 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=39.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+.+.+.++|++++++|++++++|||+...+..+.+++|+..
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 488999999999999999999999999999999999999863
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.93 E-value=4.4e-09 Score=104.81 Aligned_cols=127 Identities=22% Similarity=0.197 Sum_probs=84.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccc-c----------c-hhhh----------
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF-T----------G-KEFM---------- 682 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~----------~-~~~~---------- 682 (753)
.+.+++.++|++|+++|++++++|||+...+..+++.+++..+.....+..+ . . ..+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998642111111000 0 0 0000
Q ss_pred -----------------ccCHHHHHHHHHhcCCeE-----EEeeC--chhHHHHHHHHHHc----CCeEEEEcCCcccHH
Q 004437 683 -----------------ALSSTQQIEALSKHGGKV-----FSRAE--PRHKQEIVRMLKEM----GEVVAMTGDGVNDAP 734 (753)
Q Consensus 683 -----------------~~~~~~~~~~~~~~~~~v-----~~~~~--p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~ 734 (753)
....+.....+...+..+ +...+ ...|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 000011122222221111 11222 34788888887664 346999999999999
Q ss_pred HhhhcCceEecCCCCccC
Q 004437 735 ALKLADIGVAMGITGTEV 752 (753)
Q Consensus 735 ~l~~A~vgiamgi~g~~~ 752 (753)
|++.|++|+||+ ||.+.
T Consensus 178 ml~~ag~~vam~-na~~~ 194 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQ 194 (215)
T ss_pred HHHhCCCeEEcC-CccHH
Confidence 999999999999 98764
No 47
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.87 E-value=7.4e-09 Score=101.19 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=78.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc---ccc-ccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED---LTG-RSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
++.|++.+.|+.+++.| +++++||-....+..+++++|+..-... +.. ..++|. .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~--------------------~ 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGY--------------------Q 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECe--------------------e
Confidence 58999999999999975 9999999999999999999999531110 000 011110 1
Q ss_pred EEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
. ..++.|...++.+++.+..++++|||.||++|++.||+|||+.
T Consensus 127 ~--~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ 170 (203)
T TIGR02137 127 L--RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH 170 (203)
T ss_pred e--cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec
Confidence 1 3477899999999888889999999999999999999999996
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.85 E-value=1.4e-08 Score=102.08 Aligned_cols=127 Identities=21% Similarity=0.228 Sum_probs=83.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccc--------------cccchhh---------
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR--------------SFTGKEF--------- 681 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~--------------~~~~~~~--------- 681 (753)
.+.+.+.++|++++++|++++++|||+...+..+++.+|+..+.....+. .+.....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 48899999999999999999999999999999999999964321000000 0000000
Q ss_pred --h-----------------ccCHHHHHHHHHhcCCe-------EEEeeCc--hhHHHHHHHHHHc----CCeEEEEcCC
Q 004437 682 --M-----------------ALSSTQQIEALSKHGGK-------VFSRAEP--RHKQEIVRMLKEM----GEVVAMTGDG 729 (753)
Q Consensus 682 --~-----------------~~~~~~~~~~~~~~~~~-------v~~~~~p--~~K~~~v~~l~~~----~~~v~~~GDg 729 (753)
. ....+.....+.+.... .+....| ..|...++.+.+. ...+++|||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00011111122221111 1222333 3688888887664 3579999999
Q ss_pred cccHHHhhhcCceEecCCCCccC
Q 004437 730 VNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 730 ~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
.||.+|++.|++|+||| ||.+.
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~ 196 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPE 196 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHH
Confidence 99999999999999999 98763
No 49
>PLN02887 hydrolase family protein
Probab=98.81 E-value=1.3e-08 Score=113.91 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=38.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.+.+.+.++|++++++|++++++|||+...+..+.+++++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 58999999999999999999999999999999999998864
No 50
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.81 E-value=2.9e-08 Score=102.63 Aligned_cols=41 Identities=10% Similarity=0.071 Sum_probs=38.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.+.+.++++|++|+++|++++++|||+...+..+++++|+.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 35688999999999999999999999999999999999985
No 51
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.80 E-value=2.1e-08 Score=102.61 Aligned_cols=42 Identities=14% Similarity=0.265 Sum_probs=39.6
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+++.++|++|+++|++++++|||+...+..+.+++++.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 447899999999999999999999999999999999999986
No 52
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.78 E-value=2.7e-08 Score=97.70 Aligned_cols=103 Identities=22% Similarity=0.305 Sum_probs=80.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccc---cccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT---GRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
.++++++.+.++.++++|++|+++||-...-+..+|+.+|++....... ...++| .+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG--------------------~v 135 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG--------------------RV 135 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec--------------------ee
Confidence 7899999999999999999999999999999999999999975322110 001222 34
Q ss_pred EEee-CchhHHHHHHHHHHc-CC---eEEEEcCCcccHHHhhhcCceEecC
Q 004437 701 FSRA-EPRHKQEIVRMLKEM-GE---VVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 701 ~~~~-~p~~K~~~v~~l~~~-~~---~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.... ..+.|...++.+.+. |. .+.++|||.||.|||+.|+.++|..
T Consensus 136 ~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n 186 (212)
T COG0560 136 VGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN 186 (212)
T ss_pred eeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC
Confidence 4433 346788888666553 44 5999999999999999999999886
No 53
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.77 E-value=6e-08 Score=99.39 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=37.3
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
..+.+.++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED 57 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 44579999999999999999999999999999999999853
No 54
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.71 E-value=7.4e-08 Score=99.87 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=39.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+.+.++++|++++++|++++++|||+...+..+++++++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 488999999999999999999999999999999999999863
No 55
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.71 E-value=1.4e-07 Score=97.63 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=39.5
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
..+.+++.++|++|+++|++++++|||+...+..+++++|+..
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4577889999999999999999999999999999999999864
No 56
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.70 E-value=4.5e-08 Score=102.33 Aligned_cols=106 Identities=20% Similarity=0.311 Sum_probs=77.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc---cccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED---LTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+...... +....++|.... .
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g----------------~-- 242 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG----------------D-- 242 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC----------------c--
Confidence 4889999999999999999999999998888899999998531100 000001111000 0
Q ss_pred EeeCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 702 SRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
-+..+.|...++.+.++ .+.++|+|||.||++|++.||+|||| ||.+
T Consensus 243 -iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp 293 (322)
T PRK11133 243 -IVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKP 293 (322)
T ss_pred -cCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCH
Confidence 01345788888877654 36899999999999999999999999 5554
No 57
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.70 E-value=2.9e-08 Score=93.44 Aligned_cols=87 Identities=16% Similarity=0.243 Sum_probs=68.4
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCc--hhH
Q 004437 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP--RHK 709 (753)
Q Consensus 632 ~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K 709 (753)
.+|+.|+++|+++.++|+.+...+..+.+.+|+. ..|....| +.-
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~---------------------------------~~f~~~kpkp~~~ 87 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK---------------------------------RFHEGIKKKTEPY 87 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc---------------------------------EEEecCCCCHHHH
Confidence 6899999999999999999999999999999994 23332222 223
Q ss_pred HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 710 QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 710 ~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
..+++.++-....+++|||+.||.+|++.|++++||+ ||.+.
T Consensus 88 ~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~ 129 (169)
T TIGR02726 88 AQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVAD 129 (169)
T ss_pred HHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHH
Confidence 3333444333467999999999999999999999999 88653
No 58
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.61 E-value=1.3e-07 Score=88.44 Aligned_cols=95 Identities=24% Similarity=0.332 Sum_probs=71.7
Q ss_pred EEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHH
Q 004437 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS 694 (753)
Q Consensus 615 ~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (753)
+.++.+.+.|.. +|++|++.|+++.++|+++...+..+++.+|+..
T Consensus 24 ~~~~~~~~~~~~------~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------- 69 (154)
T TIGR01670 24 EEIKAFNVRDGY------GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------- 69 (154)
T ss_pred cEEEEEechhHH------HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------
Confidence 345554444432 9999999999999999999999999999999842
Q ss_pred hcCCeEEEeeCchhHHHHHHHHHH----cCCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 695 KHGGKVFSRAEPRHKQEIVRMLKE----MGEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 695 ~~~~~v~~~~~p~~K~~~v~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.+... ..|...++.+.+ ..+.++|+||+.||.+|++.|+++++|. ++.+
T Consensus 70 -----~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~ 122 (154)
T TIGR01670 70 -----LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHP 122 (154)
T ss_pred -----EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCH
Confidence 22221 234444444433 3467999999999999999999999998 7754
No 59
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.56 E-value=3.2e-07 Score=94.09 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=38.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.+.+++.++|++|+++|++++++|||+...+..+.+++|+.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 58899999999999999999999999999999999999986
No 60
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.50 E-value=5.7e-07 Score=89.77 Aligned_cols=44 Identities=9% Similarity=0.255 Sum_probs=39.4
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+...+++.++|++|+++|++++++|||+...+..+++++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45566789999999999999999999999999999999999853
No 61
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.46 E-value=3.4e-07 Score=84.06 Aligned_cols=108 Identities=21% Similarity=0.349 Sum_probs=76.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccc--cchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF--TGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
.+.+++++.+..|++.|.+|.++||--..-+.++|.++||+....+.....+ .|+-.. ... ....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-fd~-----------~~pt- 154 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-FDT-----------NEPT- 154 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-ccc-----------CCcc-
Confidence 4679999999999999999999999999999999999999763332211111 011000 000 0001
Q ss_pred eeCchhHHHHHHHHHHc--CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 703 RAEPRHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~--~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.....|.+.++.+++. -..++|+|||.||.+|+..|+.=++.|
T Consensus 155 -sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 -SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred -ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 1234688999988875 457999999999999999988766555
No 62
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.43 E-value=5.6e-07 Score=86.80 Aligned_cols=84 Identities=25% Similarity=0.313 Sum_probs=67.1
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHH
Q 004437 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711 (753)
Q Consensus 632 ~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 711 (753)
.+|+.|+++|+++.++||++...+..+++++|+. .+|. ..+.|..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~---------------------------------~~f~--g~~~k~~ 99 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT---------------------------------HLYQ--GQSNKLI 99 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc---------------------------------eeec--CCCcHHH
Confidence 6999999999999999999999999999999983 2332 1234555
Q ss_pred HHHHHHH-c---CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 712 IVRMLKE-M---GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 712 ~v~~l~~-~---~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.++.+.+ . ...|+|+||+.||++|++.|+++++++ ++.+
T Consensus 100 ~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~ 142 (183)
T PRK09484 100 AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHP 142 (183)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhH
Confidence 5554433 2 357999999999999999999999998 6643
No 63
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.41 E-value=2.4e-06 Score=85.55 Aligned_cols=40 Identities=18% Similarity=0.201 Sum_probs=36.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.++++|++|+++|++++++|||+...+..+++.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3445899999999999999999999999999999999986
No 64
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.34 E-value=3.3e-06 Score=83.09 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=75.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++++++.+.++.|+++|+++.++|+.....+..+++.+|+..- + ...+...+.... . ...+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~---~-~~~~~~~~~g~~----------~--p~~~~~~ 143 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV---Y-SNELVFDEKGFI----------Q--PDGIVRV 143 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE---E-EEEEEEcCCCeE----------e--cceeeEE
Confidence 5899999999999999999999999999999999999997421 0 001000000000 0 0112223
Q ss_pred CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.|..|...++.+.+. .+.++++||+.||++|++.||+++|++
T Consensus 144 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~ 189 (201)
T TIGR01491 144 TFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG 189 (201)
T ss_pred ccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC
Confidence 456677777666543 346999999999999999999999997
No 65
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.32 E-value=8.5e-07 Score=78.84 Aligned_cols=84 Identities=23% Similarity=0.330 Sum_probs=70.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHH
Q 004437 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711 (753)
Q Consensus 632 ~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 711 (753)
-.|+.+.++||++.++|||+...+..=|+++||. .+|-. -.+|..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~---------------------------------~~~qG--~~dK~~ 86 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK---------------------------------HLYQG--ISDKLA 86 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc---------------------------------eeeec--hHhHHH
Confidence 5789999999999999999999999999999993 34433 356777
Q ss_pred HHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 712 IVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 712 ~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..+.|.++ -+.|+++||-.||.|+|+..++++|.. +|.+
T Consensus 87 a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~ 129 (170)
T COG1778 87 AFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHP 129 (170)
T ss_pred HHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCH
Confidence 77766654 457999999999999999999999998 7653
No 66
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.28 E-value=2.7e-06 Score=84.97 Aligned_cols=104 Identities=24% Similarity=0.328 Sum_probs=73.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccch-hhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGK-EFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++++++.+.++.|++.|+++.++|+.....+..+++.+|+..-.. ......+ .+. ..+...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~---~~~~~~~~~~~---------------~~~~~~ 146 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA---NRLEVEDGKLT---------------GLVEGP 146 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe---eEEEEECCEEE---------------EEecCc
Confidence 589999999999999999999999999999999999999853110 0000000 000 000111
Q ss_pred -eCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 704 -AEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 704 -~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
..+..|..+++.+.++ ...++++||+.+|++|++.||++++++
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~ 194 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN 194 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC
Confidence 1123366666655444 246999999999999999999999986
No 67
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.26 E-value=3.1e-06 Score=83.58 Aligned_cols=101 Identities=24% Similarity=0.290 Sum_probs=76.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE--
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS-- 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 702 (753)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...-.. ......+ ..+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~------------------~~i~~~~ 126 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDED------------------GMITGYD 126 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCC------------------CeEECcc
Confidence 3579999999999999 99999999999999999999998521100 0000000 00111
Q ss_pred eeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
-..|+.|...++.++..+..++|+|||.||.+|.+.|++|++.+
T Consensus 127 ~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~ 170 (205)
T PRK13582 127 LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR 170 (205)
T ss_pred ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC
Confidence 12467888888988888899999999999999999999999876
No 68
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.25 E-value=5.4e-06 Score=82.38 Aligned_cols=112 Identities=19% Similarity=0.096 Sum_probs=76.8
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE--
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF-- 701 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-- 701 (753)
-+++|++.+.++.|++.|+++.++||.....+..+++.++.... .......+.+..+... ......+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~~n~~~~~~~~~~~~----------~p~~~~~~~ 137 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IYCNEADFSNEYIHID----------WPHPCDGTC 137 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EEeceeEeeCCeeEEe----------CCCCCcccc
Confidence 46999999999999999999999999999888888887744211 0000111222211100 0000010
Q ss_pred EeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.......|..+++.++...+.++|+|||.||..|++.||+.+|=+
T Consensus 138 ~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 138 QNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred ccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 011134689999998888888999999999999999999988743
No 69
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.23 E-value=9.2e-06 Score=90.90 Aligned_cols=40 Identities=3% Similarity=0.033 Sum_probs=37.1
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+.++|++|+++|++++++|||....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 5568899999999999999999999999999999999974
No 70
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.21 E-value=5.7e-06 Score=84.38 Aligned_cols=128 Identities=20% Similarity=0.267 Sum_probs=83.4
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcc--ccc-cc-cc------------------hh
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--TGR-SF-TG------------------KE 680 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--~~~-~~-~~------------------~~ 680 (753)
..+..+.+.++++++++.|+.++++|||+...++.+.+++++..+.-.+ .+. ++ .+ +.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3457799999999999999999999999999999999999976542100 000 00 00 00
Q ss_pred h-------hc-----------------cCHHH-------HHHHHHhcCCeE---EE-----eeCc--hhHHHHHHHHHHc
Q 004437 681 F-------MA-----------------LSSTQ-------QIEALSKHGGKV---FS-----RAEP--RHKQEIVRMLKEM 719 (753)
Q Consensus 681 ~-------~~-----------------~~~~~-------~~~~~~~~~~~v---~~-----~~~p--~~K~~~v~~l~~~ 719 (753)
+ .. ...+. +.+.+...+..+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 00 00011 111121111111 11 2333 4688888888765
Q ss_pred ----CCeEEEEcCCcccHHHhhh-cCceEecCCCCcc
Q 004437 720 ----GEVVAMTGDGVNDAPALKL-ADIGVAMGITGTE 751 (753)
Q Consensus 720 ----~~~v~~~GDg~ND~~~l~~-A~vgiamgi~g~~ 751 (753)
...|+++||+.||++|++. ++.||||+ ||.+
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~ 214 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQE 214 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHH
Confidence 4689999999999999998 67999999 9875
No 71
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.20 E-value=4.2e-06 Score=81.68 Aligned_cols=92 Identities=25% Similarity=0.389 Sum_probs=68.9
Q ss_pred chhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCch
Q 004437 628 GGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPR 707 (753)
Q Consensus 628 ~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 707 (753)
+++.+.|+.++++|++++|+||.....+.++++.+|+...... +..+..-. +.....+.++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~-------~~~~~~~~-----------~~~~~~~~~~~ 153 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVI-------GNELFDNG-----------GGIFTGRITGS 153 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEE-------EEEEECTT-----------CCEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEE-------EEeeeecc-----------cceeeeeECCC
Confidence 7888999999999999999999999999999999999642110 00000000 02344555554
Q ss_pred -h--HHHHHHHH------HHcCCeEEEEcCCcccHHHhh
Q 004437 708 -H--KQEIVRML------KEMGEVVAMTGDGVNDAPALK 737 (753)
Q Consensus 708 -~--K~~~v~~l------~~~~~~v~~~GDg~ND~~~l~ 737 (753)
+ |...++.+ +.....++++|||.||++|||
T Consensus 154 ~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 154 NCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 4 99999999 344789999999999999996
No 72
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.18 E-value=1.6e-05 Score=80.00 Aligned_cols=44 Identities=18% Similarity=0.320 Sum_probs=39.8
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
++...+.++++|++|+++||.|+++||+.......+.+++|+..
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 34467889999999999999999999999999999999999864
No 73
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.15 E-value=1.4e-05 Score=81.88 Aligned_cols=127 Identities=14% Similarity=0.235 Sum_probs=78.9
Q ss_pred CCCchhHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHcCCC--CC-CCcc---cc----cccc----------------
Q 004437 625 PPRGGVDKAIDDCRG-AGIEVMVITGDNKSTAEAICRQIKLF--SG-NEDL---TG----RSFT---------------- 677 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~-~gi~v~i~TGd~~~~a~~ia~~~gi~--~~-~~~~---~~----~~~~---------------- 677 (753)
.+.+++.++|++|++ .|++++++|||+...+..+++.+++. .. +..+ .+ ..+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 466899999999998 79999999999999998888777642 10 0000 00 0000
Q ss_pred ---chhh-----------hccC--HHHH---HHHHH-hcC-Ce-----EEEeeCc--hhHHHHHHHHHHc----CCeEEE
Q 004437 678 ---GKEF-----------MALS--STQQ---IEALS-KHG-GK-----VFSRAEP--RHKQEIVRMLKEM----GEVVAM 725 (753)
Q Consensus 678 ---~~~~-----------~~~~--~~~~---~~~~~-~~~-~~-----v~~~~~p--~~K~~~v~~l~~~----~~~v~~ 725 (753)
|..+ .... .+.. .+.+. ... .. -+....| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 0011 1111 11111 111 11 1222333 3788888877655 367999
Q ss_pred EcCCcccHHHhhhc----CceEecCCCCccC
Q 004437 726 TGDGVNDAPALKLA----DIGVAMGITGTEV 752 (753)
Q Consensus 726 ~GDg~ND~~~l~~A----~vgiamgi~g~~~ 752 (753)
+||+.||.+||+.+ +.||+|| ++.+-
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~~~ 225 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGATQ 225 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCCCc
Confidence 99999999999999 9999999 87653
No 74
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.14 E-value=7e-06 Score=80.87 Aligned_cols=105 Identities=13% Similarity=0.111 Sum_probs=76.1
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc-c---ccccccchhhhccCHHHHHHHHHhcCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED-L---TGRSFTGKEFMALSSTQQIEALSKHGG 698 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (753)
...+++++.+.++.+++.|++++++|+.....+..+++.+|+..--.. + ....++|...
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~----------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID----------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------
Confidence 456899999999999999999999999999999999999998531100 0 0001111100
Q ss_pred eEEEeeCchhHHHHHHHHHHc-C---CeEEEEcCCcccHHHhhhcCceEecC
Q 004437 699 KVFSRAEPRHKQEIVRMLKEM-G---EVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 699 ~v~~~~~p~~K~~~v~~l~~~-~---~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
--....+.|...++.+.+. + +.++++||+.+|.+|++.|+.++++.
T Consensus 148 --~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 --GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred --CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 0012346787777665443 3 36899999999999999999999886
No 75
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.13 E-value=6.6e-06 Score=79.11 Aligned_cols=96 Identities=26% Similarity=0.348 Sum_probs=68.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc-c---ccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED-L---TGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+++++.+.++.+++.|++++++||.....+..+++.+|+..-... + ....++|... ..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~----------------~~-- 135 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIE----------------GQ-- 135 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccC----------------Cc--
Confidence 579999999999999999999999999999999999998531100 0 0000111000 00
Q ss_pred EeeCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhc
Q 004437 702 SRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLA 739 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A 739 (753)
....+..|...++.+.+. ...++++|||.||.+|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 123457799888887654 35799999999999999876
No 76
>PLN02382 probable sucrose-phosphatase
Probab=98.13 E-value=1.3e-05 Score=87.20 Aligned_cols=126 Identities=18% Similarity=0.178 Sum_probs=79.8
Q ss_pred CCCchhHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcc--cc-cccc-------------------ch--
Q 004437 625 PPRGGVDKAI-DDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--TG-RSFT-------------------GK-- 679 (753)
Q Consensus 625 ~~r~~~~~~i-~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--~~-~~~~-------------------~~-- 679 (753)
.+.+....++ +++.+.|+.++++|||.+..+..+.++.++..+...+ .+ .+.. ..
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3444455666 8899999999999999999999999999987653100 00 0000 00
Q ss_pred -----hh-----h------------ccCHH---H----HHHHHHhcC--Ce------EEEeeCch--hHHHHHHHHHHc-
Q 004437 680 -----EF-----M------------ALSST---Q----QIEALSKHG--GK------VFSRAEPR--HKQEIVRMLKEM- 719 (753)
Q Consensus 680 -----~~-----~------------~~~~~---~----~~~~~~~~~--~~------v~~~~~p~--~K~~~v~~l~~~- 719 (753)
.+ . ....+ . +.+.+.+.+ .. .+....|. .|...++.|.++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 00 0 00010 1 111111111 11 12244554 599888888665
Q ss_pred ------CCeEEEEcCCcccHHHhhhcC-ceEecCCCCcc
Q 004437 720 ------GEVVAMTGDGVNDAPALKLAD-IGVAMGITGTE 751 (753)
Q Consensus 720 ------~~~v~~~GDg~ND~~~l~~A~-vgiamgi~g~~ 751 (753)
...++++||+.||++||+.|+ .||||| ||.+
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~ 225 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQE 225 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcH
Confidence 347999999999999999999 699999 9876
No 77
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.09 E-value=1.4e-05 Score=79.68 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=73.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE--E
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF--S 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~ 702 (753)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+ +...........++++.+... +...... .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~----------kp~p~~~~~~ 142 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT----------WPHPCDEHCQ 142 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe----------ccCCcccccc
Confidence 68999999999999999999999999999999999887 633110000111222211100 0000000 0
Q ss_pred eeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
......|..+++.++.....++++|||.||+.|.+.||+.+|
T Consensus 143 ~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 143 NHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred ccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 001134888888888777889999999999999999999776
No 78
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.08 E-value=1.4e-05 Score=77.54 Aligned_cols=113 Identities=19% Similarity=0.165 Sum_probs=75.8
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHH-HHHhcCCeEEE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIE-ALSKHGGKVFS 702 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~ 702 (753)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...-. .+++.+.... .. .... ...+| ..+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~-~~-g~~~~~~~~~--~~~~ 142 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI----EIYSNPASFD-ND-GRHIVWPHHC--HGCC 142 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee----EEeccCceEC-CC-CcEEEecCCC--CccC
Confidence 4788999999999999999999999999999999999998853211 1111110000 00 0000 00000 0000
Q ss_pred e-eCchhHHHHHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEe
Q 004437 703 R-AEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 703 ~-~~p~~K~~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
. .....|..+++.+++. ...++++|||.||+.|.+.||+-+|
T Consensus 143 ~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 143 SCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred cCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1 1123588999998887 8899999999999999999988765
No 79
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.07 E-value=1e-05 Score=81.78 Aligned_cols=43 Identities=30% Similarity=0.417 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHc-C---CeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 708 HKQEIVRMLKEM-G---EVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 708 ~K~~~v~~l~~~-~---~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.|...++.+.++ | ..++++||+.||.+||+.|++||+|| |+.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~ 205 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDP 205 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcH
Confidence 688888888765 3 36999999999999999999999999 8865
No 80
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.93 E-value=3.4e-05 Score=70.22 Aligned_cols=118 Identities=19% Similarity=0.210 Sum_probs=74.4
Q ss_pred cccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 621 GLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 621 ~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
....++.+++.+.+++|++.|++++++||+....+...++.+|+...... ++............ ..........
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~--~~~~~~~~~~ 93 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP----VITSNGAAIYYPKE--GLFLGGGPFD 93 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh----eeccchhhhhcccc--cccccccccc
Confidence 45568999999999999999999999999999999999999988432111 11000000000000 0000000122
Q ss_pred EEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcC-ceEe
Q 004437 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD-IGVA 744 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~-vgia 744 (753)
..+-.++.+..+.+.+......++++||+.+|+.|++.++ -+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 2233444555566665555678999999999999999954 4553
No 81
>PLN02954 phosphoserine phosphatase
Probab=97.92 E-value=5.7e-05 Score=75.71 Aligned_cols=104 Identities=21% Similarity=0.329 Sum_probs=70.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+.... .....+...+. ..+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~-~~~~~~~~~~~-----------------g~~~g~~ 145 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN-IFANQILFGDS-----------------GEYAGFD 145 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh-EEEeEEEEcCC-----------------CcEECcc
Confidence 37899999999999999999999999999999999999995210 00000000000 001110
Q ss_pred -----eCchhHHHHHHHHHHc--CCeEEEEcCCcccHHHhhh--cCceEecC
Q 004437 704 -----AEPRHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKL--ADIGVAMG 746 (753)
Q Consensus 704 -----~~p~~K~~~v~~l~~~--~~~v~~~GDg~ND~~~l~~--A~vgiamg 746 (753)
.....|...++.+.+. ...++++||+.||+.|.+. ++++++.|
T Consensus 146 ~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~ 197 (224)
T PLN02954 146 ENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYG 197 (224)
T ss_pred CCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecC
Confidence 0123477777766654 3579999999999999887 45556555
No 82
>PTZ00174 phosphomannomutase; Provisional
Probab=97.89 E-value=7.2e-05 Score=76.04 Aligned_cols=45 Identities=22% Similarity=0.229 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHHcCCeEEEEcC----CcccHHHhhhc-CceEecCCCCccC
Q 004437 707 RHKQEIVRMLKEMGEVVAMTGD----GVNDAPALKLA-DIGVAMGITGTEV 752 (753)
Q Consensus 707 ~~K~~~v~~l~~~~~~v~~~GD----g~ND~~~l~~A-~vgiamgi~g~~~ 752 (753)
-+|...++.|.++.+.|++||| |.||.+||+.| -.|++++ |+.|-
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~ 236 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDT 236 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHH
Confidence 3699999999888889999999 99999999976 4667777 87653
No 83
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.76 E-value=0.00019 Score=70.73 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=35.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIK 663 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~g 663 (753)
++.+++.++|++|++.|++++++|||....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 478999999999999999999999999999999988754
No 84
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.65 E-value=0.00026 Score=70.58 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=73.9
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
...+-+++++++..|+++|++..++|+++...+..+.+..|+...-. .+++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~-----------------------------~i~g 137 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD-----------------------------VIVG 137 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc-----------------------------eEEc
Confidence 55688999999999999999999999999999999999999965321 2222
Q ss_pred -ee------CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcC---ceEecCC
Q 004437 703 -RA------EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD---IGVAMGI 747 (753)
Q Consensus 703 -~~------~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~---vgiamgi 747 (753)
+. .|.....+++.+....+.++||||..+|+.|=+.|+ |||..|.
T Consensus 138 ~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 138 GDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred CCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCC
Confidence 22 233334444444444347999999999999999998 7788874
No 85
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.60 E-value=0.0002 Score=71.83 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=69.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-. .++.++. +..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~--------------------~~~ 147 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS----VVIGGDS--------------------LPN 147 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----EEEcCCC--------------------CCC
Confidence 4578999999999999999999999999999999999999853211 1111110 001
Q ss_pred eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEec
Q 004437 704 AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAM 745 (753)
Q Consensus 704 ~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giam 745 (753)
..| +--..+++.++.....++++||+.+|+.|.+.||+ +|.+
T Consensus 148 ~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v 192 (226)
T PRK13222 148 KKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGV 192 (226)
T ss_pred CCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEE
Confidence 122 22234445554446789999999999999999998 4444
No 86
>PRK08238 hypothetical protein; Validated
Probab=97.52 E-value=0.00028 Score=78.00 Aligned_cols=94 Identities=18% Similarity=0.245 Sum_probs=70.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
|+++++.+.+++++++|++++++|+.+...+..+++.+|+.. .++.++. ..+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-------~Vigsd~--------------------~~~~ 124 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-------GVFASDG--------------------TTNL 124 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-------EEEeCCC--------------------cccc
Confidence 478999999999999999999999999999999999999721 1111110 0123
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.|+.|...+...... +.+.++||+.+|.+|++.|+-.++++
T Consensus 125 kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 125 KGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred CCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 455665544422221 23678899999999999999999987
No 87
>PRK11590 hypothetical protein; Provisional
Probab=97.49 E-value=0.00066 Score=67.20 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=73.4
Q ss_pred CCCchhHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE-
Q 004437 625 PPRGGVDKAI-DDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS- 702 (753)
Q Consensus 625 ~~r~~~~~~i-~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 702 (753)
.+.|++.+.| +.+++.|++++++|+-...-+..+++.+|+......+ +.++.. ..+..+..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~-----------~~tg~~~g~ 157 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQR-----------RYGGWVLTL 157 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEE-----------EEccEECCc
Confidence 4589999999 5788899999999999999999999999963211111 111110 00011111
Q ss_pred eeCchhHHHHHHHH-HHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 703 RAEPRHKQEIVRML-KEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 703 ~~~p~~K~~~v~~l-~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.+..+.|..-++.. ........+-||+.||.|||+.|+-.++++
T Consensus 158 ~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 158 RCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred cCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 24557788766644 334456679999999999999999999886
No 88
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.47 E-value=0.00082 Score=66.27 Aligned_cols=106 Identities=12% Similarity=0.074 Sum_probs=72.9
Q ss_pred CCCchhHHHHH-HHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAID-DCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~-~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..++......+ +.++..... +...-..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i------~t~le~~~g----------g~~~g~~ 157 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLI------ASQIERGNG----------GWVLPLR 157 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEE------EEEeEEeCC----------ceEcCcc
Confidence 46899999996 788899999999999999999999997664321111 111110000 0001112
Q ss_pred eCchhHHHHHHHH-HHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 704 AEPRHKQEIVRML-KEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 704 ~~p~~K~~~v~~l-~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
+..++|..-++.. ........+-||+.||.|||+.||..++++
T Consensus 158 c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 158 CLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 4557787766644 323345679999999999999999999885
No 89
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.43 E-value=0.0016 Score=76.87 Aligned_cols=127 Identities=21% Similarity=0.266 Sum_probs=77.3
Q ss_pred CCCchhHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHcCCC--C--------CCCcccccc------------------
Q 004437 625 PPRGGVDKAIDDCRG-AGIEVMVITGDNKSTAEAICRQIKLF--S--------GNEDLTGRS------------------ 675 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~-~gi~v~i~TGd~~~~a~~ia~~~gi~--~--------~~~~~~~~~------------------ 675 (753)
.+.+++.++|++|.+ .|+.|+++|||............++. . +...+....
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 467899999999999 59999999999999888776655531 1 000000000
Q ss_pred -------ccchhh------hccCH-------HHHHHHH----HhcCCeEE-----EeeCc--hhHHHHHHHHHHc--CCe
Q 004437 676 -------FTGKEF------MALSS-------TQQIEAL----SKHGGKVF-----SRAEP--RHKQEIVRMLKEM--GEV 722 (753)
Q Consensus 676 -------~~~~~~------~~~~~-------~~~~~~~----~~~~~~v~-----~~~~p--~~K~~~v~~l~~~--~~~ 722 (753)
+..+.. ..... .+....+ ......+. ....| -+|...++.+.+. ...
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 000000 00000 0111111 11111111 12333 4799999888875 358
Q ss_pred EEEEcCCcccHHHhhhc---CceEecCCCCccC
Q 004437 723 VAMTGDGVNDAPALKLA---DIGVAMGITGTEV 752 (753)
Q Consensus 723 v~~~GDg~ND~~~l~~A---~vgiamgi~g~~~ 752 (753)
++++||+.||.+|++.+ +.+|+|| ++...
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~~s~ 705 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-PGESR 705 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-CCCCc
Confidence 99999999999999996 6999999 76554
No 90
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.41 E-value=0.00041 Score=68.88 Aligned_cols=90 Identities=16% Similarity=0.147 Sum_probs=65.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+...- ..+++.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----------------------------~~~~~~~ 135 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-----------------------------SVLIGGD 135 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-----------------------------cEEEecC
Confidence 57899999999999999999999999999999999999984311 112221
Q ss_pred ----eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 704 ----AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 704 ----~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..| +-=..+++.+.-....++++||+.+|+.|.+.|++-.
T Consensus 136 ~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~ 181 (213)
T TIGR01449 136 SLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPS 181 (213)
T ss_pred CCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeE
Confidence 112 1112333333333467999999999999999999754
No 91
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.39 E-value=0.00046 Score=71.17 Aligned_cols=89 Identities=19% Similarity=0.195 Sum_probs=64.8
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE-
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS- 702 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 702 (753)
.++.+++.++|+.|+++|++++++|+.+...+..+.+..|+.... ..+++
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----------------------------~~i~~~ 150 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----------------------------RWIIGG 150 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----------------------------eEEEec
Confidence 467899999999999999999999999998888888888874311 11221
Q ss_pred eeCchhH------HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 703 RAEPRHK------QEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 703 ~~~p~~K------~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
...+..| ..+++.+.-..+.+++|||+.||+.|-+.|++
T Consensus 151 d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi 195 (272)
T PRK13223 151 DTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGV 195 (272)
T ss_pred CCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCC
Confidence 1112222 23333333335689999999999999999997
No 92
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.38 E-value=0.00047 Score=69.85 Aligned_cols=44 Identities=34% Similarity=0.406 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 707 RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 707 ~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..|...++.++++ .+.|+++||+.||.+||..++-||.+| |+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~ 211 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQP 211 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-H
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCH
Confidence 4699999999876 357899999999999999999999999 8864
No 93
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.28 E-value=0.00045 Score=68.11 Aligned_cols=97 Identities=21% Similarity=0.297 Sum_probs=66.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.+++|+++|+++.++|+.....+....+.+|+...-.. ++..++. ....-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~----i~~~~~~------------------~~~KP 132 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH----VIGSDEV------------------PRPKP 132 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee----EEecCcC------------------CCCCC
Confidence 6789999999999999999999999999989888899998431110 0000000 00011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.|+-=..+++.++-....++||||+.+|+.+-+.||+.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 133 APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTAT 171 (205)
T ss_pred ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeE
Confidence 122123333344333567999999999999999999853
No 94
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.19 E-value=0.0013 Score=66.73 Aligned_cols=45 Identities=18% Similarity=0.274 Sum_probs=41.0
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN 668 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~ 668 (753)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+..+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 457999999999999999999999999999999999999986543
No 95
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.19 E-value=0.0022 Score=59.93 Aligned_cols=105 Identities=21% Similarity=0.210 Sum_probs=65.5
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHc---CCCCCCCccccccccchhhhccCHHHHHHHHHhc
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE---AICRQI---KLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKH 696 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~---~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (753)
++.+.+++.+++++++++|++++++|||+...+. ....++ |...+...+ ....|..+..+ .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l--i~~~g~~~~~~---------~-- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV--LLSPDRLFAAL---------H-- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE--EEcCCcchhhh---------h--
Confidence 5788999999999999999999999999988874 555552 311111000 00111111000 0
Q ss_pred CCeEEEeeCchhHHHHHHHHHH-----cCCeEEEEcCCcccHHHhhhcCc
Q 004437 697 GGKVFSRAEPRHKQEIVRMLKE-----MGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 697 ~~~v~~~~~p~~K~~~v~~l~~-----~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
..+..+..-+.|...++.+.+ ....++++|++.+|+.+.+++++
T Consensus 92 -~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 92 -REVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -cccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 112222222347777777776 34567889999999999777665
No 96
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.19 E-value=0.0013 Score=65.86 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=66.6
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-. .+++.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----------------------------~~~~~ 141 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD-----------------------------ALASA 141 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc-----------------------------EEEEc
Confidence 3578999999999999999999999999999999999999854211 12221
Q ss_pred -----eCchhHHHHHHHHHHc---CCeEEEEcCCcccHHHhhhcCceEe
Q 004437 704 -----AEPRHKQEIVRMLKEM---GEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 704 -----~~p~~K~~~v~~l~~~---~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
..|.- .-+.+.+++. .+.++++||+.||+.+-+.||+..+
T Consensus 142 ~~~~~~Kp~~-~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i 189 (222)
T PRK10826 142 EKLPYSKPHP-EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSI 189 (222)
T ss_pred ccCCCCCCCH-HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEE
Confidence 11221 1223333333 4679999999999999999997543
No 97
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.15 E-value=0.00091 Score=66.42 Aligned_cols=95 Identities=18% Similarity=0.136 Sum_probs=65.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|+++|+++.++|+.....+..+.+.+|+...-. .++..+... ...-.
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~------------------~~Kp~ 140 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD----VVITLDDVE------------------HAKPD 140 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee----EEEecCcCC------------------CCCCC
Confidence 67999999999999999999999999999999999999853111 011100000 00111
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
|+--..+++.+.-....+++|||+.+|+.+-+.||+-
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 2222344444443356799999999999999999983
No 98
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.14 E-value=0.0015 Score=65.13 Aligned_cols=87 Identities=22% Similarity=0.312 Sum_probs=62.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCC----hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDN----KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (753)
-.+.+++++.++.|++.|+++.++|+|. ..++..+.+..|+..... . ..
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~--f-------------------------~v 165 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM--N-------------------------PV 165 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc--e-------------------------eE
Confidence 3477889999999999999999999985 457888888899832110 0 12
Q ss_pred EEEeeCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 700 VFSRAEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 700 v~~~~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
+++..++ ..|... +++.+ .++++||..+|..+-+.||+
T Consensus 166 il~gd~~~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 166 IFAGDKPGQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGA 205 (237)
T ss_pred EEcCCCCCCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCC
Confidence 3332222 345543 34444 48999999999999999987
No 99
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.11 E-value=0.0014 Score=65.89 Aligned_cols=97 Identities=15% Similarity=0.086 Sum_probs=66.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|+++.++|+.+...+..+.+.+|+...-. .++.++.. ....-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~------------------~~~KP 152 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA----VLIGGDTL------------------AERKP 152 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc----EEEecCcC------------------CCCCC
Confidence 478999999999999999999999999888888888888743111 01111000 00011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.|+-=..+++.++-....++||||+.+|+.|-+.||+..
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~ 191 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPS 191 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcE
Confidence 122223444555545678999999999999999999753
No 100
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.11 E-value=0.0012 Score=65.95 Aligned_cols=83 Identities=19% Similarity=0.308 Sum_probs=59.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGD----NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+.+++++.++.++++|+++.++|++ ...++..+.+.+|+.... ..++
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f-----------------------------~~i~ 165 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN-----------------------------PVIF 165 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe-----------------------------eEEE
Confidence 4445999999999999999999999 667889999999995311 1122
Q ss_pred EeeC----chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 702 SRAE----PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 702 ~~~~----p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
..-. ..+|. ..+++.+ .++|+||..||..+-+.|++
T Consensus 166 ~~d~~~~~Kp~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 166 AGDKPGQYQYTKT---QWIQDKN-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred CCCCCCCCCCCHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCC
Confidence 2111 01233 2344444 47999999999999999986
No 101
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.88 E-value=0.0047 Score=60.43 Aligned_cols=94 Identities=17% Similarity=0.061 Sum_probs=64.4
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
.+++.+.+.++++.|++.|+++.++||.....+..+.+.+|+...-. .++.++. +..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----~~~~~~~-------------------~~~ 160 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP----VQIWMED-------------------CPP 160 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC----EEEeecC-------------------CCC
Confidence 34466777999999999999999999999999999999999853211 1111110 111
Q ss_pred eeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhc
Q 004437 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLA 739 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A 739 (753)
.-.|+.-..+++.+.-....+++|||+.+|+.+-+.|
T Consensus 161 KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 161 KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 2223333444555554567899999999999886654
No 102
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.87 E-value=0.004 Score=64.03 Aligned_cols=89 Identities=15% Similarity=0.138 Sum_probs=64.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+...-. .+ +.+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~----~v------------------------i~~~~ 193 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS----VV------------------------QAGTP 193 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE----EE------------------------EecCC
Confidence 467999999999999999999999999999999999999853211 01 11111
Q ss_pred CchhHHHHHH-HHHH---cCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRHKQEIVR-MLKE---MGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~K~~~v~-~l~~---~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.+ .|...+. .+++ ....+++|||+.+|+.+-+.|++-
T Consensus 194 ~~-~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~ 234 (273)
T PRK13225 194 IL-SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLI 234 (273)
T ss_pred CC-CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCe
Confidence 11 1222222 2222 346799999999999999999974
No 103
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.82 E-value=0.003 Score=63.03 Aligned_cols=95 Identities=24% Similarity=0.307 Sum_probs=66.8
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC--CCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF--SGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
.++.+|+.+.++.|++.|+++.++|+.....+..+.+.+|+. ..-. .++..++.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~----~i~~~~~~-------------------- 141 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD----AVVCPSDV-------------------- 141 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC----EEEcCCcC--------------------
Confidence 378999999999999999999999999999999999999885 2111 11111110
Q ss_pred EeeCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceE
Q 004437 702 SRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.+..|. ...+...+++. ...+++|||+.+|+.+-+.|++.+
T Consensus 142 ~~~KP~-p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 142 AAGRPA-PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CCCCCC-HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 011121 11222333332 357999999999999999999986
No 104
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.80 E-value=0.0078 Score=57.01 Aligned_cols=114 Identities=8% Similarity=0.078 Sum_probs=75.1
Q ss_pred CCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHH
Q 004437 612 SDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGD-NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQI 690 (753)
Q Consensus 612 ~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (753)
.+.......+-+-++.+++.+.++.|+++|+++.++|+. ....+..+...+|+........ +.
T Consensus 32 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~----------------~~ 95 (174)
T TIGR01685 32 NNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVP----------------MH 95 (174)
T ss_pred CCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCccc----------------HH
Confidence 334566666677778999999999999999999999987 8888888889898842111000 00
Q ss_pred HHHHhcCCeEEEeeCchhH--HHHHHHHHHc------CCeEEEEcCCcccHHHhhhcCceEe
Q 004437 691 EALSKHGGKVFSRAEPRHK--QEIVRMLKEM------GEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 691 ~~~~~~~~~v~~~~~p~~K--~~~v~~l~~~------~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
... +..+.+...+..| ..+.+.+.+. ...+++|||...|+.+-+.|++-++
T Consensus 96 ~~F---d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 96 SLF---DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred Hhc---eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 000 0122222211122 2334444432 3689999999999999999997543
No 105
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.75 E-value=0.0055 Score=55.56 Aligned_cols=88 Identities=17% Similarity=0.157 Sum_probs=62.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCC--------hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHh
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDN--------KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (753)
-++.+++.++++.|+++|++++++|+.. ...+..+.+.+|+...
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~---------------------------- 75 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID---------------------------- 75 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE----------------------------
Confidence 3578999999999999999999999998 6777888888887410
Q ss_pred cCCeEEEe--eCc--hhHHHHHHHHH-HcCCeEEEEcC-CcccHHHhhhcCc
Q 004437 696 HGGKVFSR--AEP--RHKQEIVRMLK-EMGEVVAMTGD-GVNDAPALKLADI 741 (753)
Q Consensus 696 ~~~~v~~~--~~p--~~K~~~v~~l~-~~~~~v~~~GD-g~ND~~~l~~A~v 741 (753)
..+++. ..| +-=..+++.++ -....++|||| ..+|+.+-+.|++
T Consensus 76 --~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 76 --VLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --EEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 001110 112 11133444442 34578999999 6999999999986
No 106
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.75 E-value=0.0041 Score=63.28 Aligned_cols=96 Identities=18% Similarity=0.162 Sum_probs=67.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+...-. .++.+++.. ...-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~iv~~~~~~------------------~~KP 165 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----AVIIGSECE------------------HAKP 165 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc----EEEecCcCC------------------CCCC
Confidence 467899999999999999999999999999999999999853211 111111110 0011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|+--..+++.+.-....+++|||+.+|+.+=+.|++-
T Consensus 166 ~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 166 HPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred ChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCE
Confidence 12222344444444456799999999999999999973
No 107
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.73 E-value=0.0037 Score=65.67 Aligned_cols=108 Identities=15% Similarity=0.101 Sum_probs=73.7
Q ss_pred cccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC-CCCccccccccchhhhccCHHHHHHHHHhcCCe
Q 004437 621 GLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS-GNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (753)
Q Consensus 621 ~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (753)
...+++.+++.+++++|++.|++++++||++...+..+.+.+|+.. .-.. +...+.. ...+.. .
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~----i~~~~~~--------~~~~~~---~ 247 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD----LIGRPPD--------MHFQRE---Q 247 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh----hhCCcch--------hhhccc---C
Confidence 4678899999999999999999999999999999999999988853 1100 0000000 000000 0
Q ss_pred EEEeeCchhHHHHHHHHHH-cCCeEEEEcCCcccHHHhhhcCceE
Q 004437 700 VFSRAEPRHKQEIVRMLKE-MGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 700 v~~~~~p~~K~~~v~~l~~-~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
--.+-.|+-+...++.+.. ....++||||..+|+.+-+.|++-+
T Consensus 248 ~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 248 GDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 0012334556666665543 3478999999999999999999753
No 108
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.73 E-value=0.0047 Score=60.42 Aligned_cols=94 Identities=12% Similarity=0.152 Sum_probs=65.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+++++|+++|+++.++|+-+...+....+.+|+...-. .++..++. ...
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd----~i~~s~~~--------------------~~~ 147 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD----AVLSADAV--------------------RAY 147 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh----eeEehhhc--------------------CCC
Confidence 467999999999999999999999999888888889999742110 11111110 011
Q ss_pred Cchh--HHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRH--KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~--K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|.- =..+.+.+.-....+++|||+.+|+.+-+.||+-
T Consensus 148 KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 148 KPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 2221 1233344433456799999999999999999874
No 109
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.59 E-value=0.006 Score=62.31 Aligned_cols=93 Identities=19% Similarity=0.203 Sum_probs=64.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+..... ..++.++.. . +.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~---d~ii~~~~~-------------------~-~~ 155 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP---DYNVTTDDV-------------------P-AG 155 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC---ceEEccccC-------------------C-CC
Confidence 367899999999999999999999999999999988888754210 011111110 0 11
Q ss_pred CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.|. ...+.+.+++. .+.++||||+.+|+.+=+.|++
T Consensus 156 KP~-p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 156 RPA-PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred CCC-HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCC
Confidence 121 22333334333 3569999999999999999996
No 110
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.52 E-value=0.007 Score=61.79 Aligned_cols=96 Identities=10% Similarity=0.061 Sum_probs=66.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|+++|+++.++|+.....+..+.+.+|+...-. .+++++... ...-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~ii~~~d~~------------------~~KP 166 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS----VVLAAEDVY------------------RGKP 166 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc----EEEecccCC------------------CCCC
Confidence 468999999999999999999999999999999999999853211 111111110 0001
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|+-=...++.+.-....++||||..+|+.+=+.|++-
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~ 204 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMK 204 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCE
Confidence 11111333444443456799999999999999999984
No 111
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.47 E-value=0.0076 Score=60.10 Aligned_cols=93 Identities=17% Similarity=0.138 Sum_probs=63.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|+++|++++++|+-+...+....+.+|+...-. .++.+++. .+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~--------------------~~~ 149 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD----AVITSEEE--------------------GVE 149 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc----EEEEeccC--------------------CCC
Confidence 478999999999999999999999999888888888888743111 01111100 011
Q ss_pred Cchh--HHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCc
Q 004437 705 EPRH--KQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADI 741 (753)
Q Consensus 705 ~p~~--K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~v 741 (753)
.|.. =..+++.+.-....+++|||.. +|+.+=+.||+
T Consensus 150 KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~ 189 (221)
T TIGR02253 150 KPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGM 189 (221)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCC
Confidence 2221 1222333332346799999998 99999999987
No 112
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.43 E-value=0.0054 Score=56.44 Aligned_cols=109 Identities=16% Similarity=0.172 Sum_probs=72.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
.++|+-++.++.+++.+++++++|+....-...+-..++=...... ..+.+.+..-.... + ..+++..
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~--idi~sn~~~ih~dg--------~-h~i~~~~d 141 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYC--IDIVSNNDYIHIDG--------Q-HSIKYTDD 141 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceee--eEEeecCceEcCCC--------c-eeeecCCc
Confidence 4789999999999999999999999988877777776652110000 00000000000000 0 0011111
Q ss_pred -eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 704 -AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 704 -~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
..-.+|...|+.+++..+.+.++|||+.|+.|-+.+|+=+|
T Consensus 142 s~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 142 SQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 12357999999999999999999999999999998887664
No 113
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.42 E-value=0.019 Score=58.27 Aligned_cols=87 Identities=11% Similarity=0.223 Sum_probs=62.2
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCe
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKST---AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (753)
..++-|++.+.++.|++.|+++.++|++.... +....+..|+..... ..
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----------------------------d~ 167 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----------------------------EH 167 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----------------------------ce
Confidence 34567999999999999999999999998443 345567788853211 24
Q ss_pred EEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhh
Q 004437 700 VFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737 (753)
Q Consensus 700 v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~ 737 (753)
++.|-....|..-.+.+.+.-..++++||..+|.....
T Consensus 168 lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 168 LLLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred EEeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 55554444566666666665567999999999996543
No 114
>PLN02580 trehalose-phosphatase
Probab=96.36 E-value=0.037 Score=58.97 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=37.0
Q ss_pred eeCc---hhHHHHHHHHHHc-C---C---eEEEEcCCcccHHHhhh-----cCceEecCCCCc
Q 004437 703 RAEP---RHKQEIVRMLKEM-G---E---VVAMTGDGVNDAPALKL-----ADIGVAMGITGT 750 (753)
Q Consensus 703 ~~~p---~~K~~~v~~l~~~-~---~---~v~~~GDg~ND~~~l~~-----A~vgiamgi~g~ 750 (753)
.+.| -+|...++.+.+. + . .++++||+.||.+||+. +++||+|| +|.
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~ 354 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVP 354 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCC
Confidence 4455 3899999888765 2 1 24899999999999996 69999999 765
No 115
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.32 E-value=0.011 Score=59.09 Aligned_cols=90 Identities=11% Similarity=-0.010 Sum_probs=63.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|+++|+++.++|.-+...+....+..|+...-. ..+.+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----------------------------~iv~s~~ 144 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD----------------------------LLLSTHT 144 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC----------------------------EEEEeee
Confidence 578999999999999999999999998888888778888743110 1222221
Q ss_pred CchhH------HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRHK------QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~K------~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
....| ..+.+.+.-....+++|||+.+|+.+=+.||+.
T Consensus 145 ~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 145 FGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 11112 222233333356799999999999999999995
No 116
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.31 E-value=0.028 Score=55.39 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=57.7
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKST---AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
-|.-+++.++++.|++.|++|+++|||.... +..-.++.|+..- ..+
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~------------------------------~~L 168 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW------------------------------KHL 168 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc------------------------------Cee
Confidence 4677999999999999999999999999755 3344556676421 234
Q ss_pred EEeeC-chh------HHHHHHHHHHcCC-eEEEEcCCcccHH
Q 004437 701 FSRAE-PRH------KQEIVRMLKEMGE-VVAMTGDGVNDAP 734 (753)
Q Consensus 701 ~~~~~-p~~------K~~~v~~l~~~~~-~v~~~GDg~ND~~ 734 (753)
+.|.. ... |...-+.+.+.|+ +++.+||..+|..
T Consensus 169 iLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 169 ILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred eecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 55531 111 6666666776766 5677999999973
No 117
>PRK06769 hypothetical protein; Validated
Probab=96.29 E-value=0.018 Score=54.89 Aligned_cols=96 Identities=8% Similarity=-0.069 Sum_probs=56.0
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChH--------HHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKS--------TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHG 697 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (753)
+.|++.+++++|++.|+++.++|+.... .+....+..|+..- +.+....++..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~~~---------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI---YLCPHKHGDGC---------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE---EECcCCCCCCC----------------
Confidence 6799999999999999999999987631 12223444555210 00000000000
Q ss_pred CeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 698 GKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 698 ~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
-...-.|+-=..+++.+.-..+.+++|||..+|+.+=+.|++-
T Consensus 90 --~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 90 --ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred --CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 0001111111333444433356799999999999999999973
No 118
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.28 E-value=0.013 Score=56.30 Aligned_cols=88 Identities=18% Similarity=0.235 Sum_probs=60.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.+++.+.++.|++.|++++++|+-.... ..+...+|+...-. ..+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~----------------------------~i~~~~~ 135 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD----------------------------VVIFSGD 135 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC----------------------------EEEEcCC
Confidence 578999999999999999999999988877 55555577743111 112211
Q ss_pred ---eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 704 ---AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 704 ---~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
..| +--..+.+.+.-....++++||...|+.+-+.||+
T Consensus 136 ~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 136 VGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 112 11133333443345789999999999999999887
No 119
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.27 E-value=0.0053 Score=58.32 Aligned_cols=96 Identities=18% Similarity=0.270 Sum_probs=67.0
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++.+++.+.++.|++.|++++++|+.+........+.+|+...-. .++..++...
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~----~i~~~~~~~~-------------------- 131 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFD----EIISSDDVGS-------------------- 131 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCS----EEEEGGGSSS--------------------
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccc----cccccchhhh--------------------
Confidence 3578999999999999999999999999999999999999852111 1111111100
Q ss_pred eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 704 AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 704 ~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..| +-=..+++.+.-..+.+++|||+..|+.+-+.||+-.
T Consensus 132 ~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 132 RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 011 1113344444444678999999999999999998743
No 120
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.27 E-value=0.0075 Score=58.20 Aligned_cols=92 Identities=14% Similarity=0.141 Sum_probs=58.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.++|+.|+++|+++.++|+... +....+.+|+...-. .++.+.+. .+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~----~~~~~~~~--------------------~~~ 140 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD----AIVDPAEI--------------------KKG 140 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc----EEEehhhc--------------------CCC
Confidence 5779999999999999999999997543 456778888743211 11111110 011
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|. -=...++.+.-....+++|||+.+|+.+-+.|++-
T Consensus 141 kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 141 KPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 222 11222333322245799999999999999999974
No 121
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.24 E-value=0.013 Score=60.27 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=62.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.|++.+.|+.|++.|+++.++|+.....+..+.+.+|+..... ..++.++.. ...
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~---d~i~~~~~~--------------------~~~ 157 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP---DHVVTTDDV--------------------PAG 157 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc---eEEEcCCcC--------------------CCC
Confidence 467899999999999999999999999988888878777643110 001111100 001
Q ss_pred CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.| +..-+.+.+++. ...++||||+.+|+.+=+.|++
T Consensus 158 KP-~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 158 RP-YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred CC-ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 12 123334444443 2569999999999999999996
No 122
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.20 E-value=0.016 Score=55.03 Aligned_cols=84 Identities=14% Similarity=0.206 Sum_probs=59.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDN-KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.+.+++.++++.|++.|++++++|+.+ ...+..+++.+|+.. ....
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------------~~~~ 89 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------------LPHA 89 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------------EcCC
Confidence 567899999999999999999999988 566777778777631 1111
Q ss_pred eCchhH--HHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCc
Q 004437 704 AEPRHK--QEIVRMLKEMGEVVAMTGDGV-NDAPALKLADI 741 (753)
Q Consensus 704 ~~p~~K--~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~v 741 (753)
..|... ..+++.+.-....++||||.. .|+.+=+.|++
T Consensus 90 ~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 90 VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 123211 222223322356799999998 79999999987
No 123
>PRK11587 putative phosphatase; Provisional
Probab=96.17 E-value=0.012 Score=58.51 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=64.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|+++|+++.++|+.....+....+..|+.... .+++++... ...-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~-----~i~~~~~~~------------------~~KP 139 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPE-----VFVTAERVK------------------RGKP 139 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCcc-----EEEEHHHhc------------------CCCC
Confidence 47899999999999999999999998877666666667763211 111111110 0011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce-EecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg 746 (753)
.|+-=....+.+.-....+++|||+.+|+.+=+.|++- |++.
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 12222333344443457899999999999999999973 4443
No 124
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.12 E-value=0.014 Score=62.21 Aligned_cols=94 Identities=14% Similarity=0.103 Sum_probs=66.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+|+.+.++.|+++|+++.++|+.....+..+.+.+||...-. .++.+++. .+.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd----~Iv~sddv--------------------~~~ 271 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS----VIVAAEDV--------------------YRG 271 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce----EEEecCcC--------------------CCC
Confidence 367999999999999999999999999999999999999853111 11111110 011
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|+ -=...++.+.-....++||||..+|+.+-+.|++-
T Consensus 272 KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 272 KPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence 222 11334444444467899999999999999999973
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.06 E-value=0.0073 Score=58.26 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=60.9
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
-++.|++.+.++.|++.|+++.++|+. ..+..+.+.+|+...-. .++.++. ..+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~----~v~~~~~--------------------~~~ 140 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFD----AIVDADE--------------------VKE 140 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCC----Eeeehhh--------------------CCC
Confidence 368899999999999999999999987 55777788888743111 0111000 001
Q ss_pred eCchhH--HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 704 AEPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 704 ~~p~~K--~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
..|... ..+.+.+.-..+.+++|||+.+|+.+=+.||+.
T Consensus 141 ~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 141 GKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 122211 222333332346799999999999999999874
No 126
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.99 E-value=0.054 Score=51.61 Aligned_cols=38 Identities=8% Similarity=0.214 Sum_probs=34.5
Q ss_pred hhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 629 GVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 629 ~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+...+.+|+++|+.|+.+|.........+-+.+|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 46788999999999999999999999999999999863
No 127
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.98 E-value=0.024 Score=58.90 Aligned_cols=98 Identities=22% Similarity=0.268 Sum_probs=62.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|++.|+++.++|+.+......+.+..+........ .++.+++ ....
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~--------------------~~~~ 201 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGL--DVFAGDD--------------------VPKK 201 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCce--EEEeccc--------------------cCCC
Confidence 47899999999999999999999999888777666655321100000 0001110 0011
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
.|+ -=..+++.+.-....+++|||+.+|+.+-+.||+.+.
T Consensus 202 KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i 243 (286)
T PLN02779 202 KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCI 243 (286)
T ss_pred CCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEE
Confidence 122 1133344444345679999999999999999997554
No 128
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.81 E-value=0.035 Score=51.34 Aligned_cols=97 Identities=22% Similarity=0.247 Sum_probs=58.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNK---------------STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (753)
++.+++.++++.|++.|+++.++|..+. ..+..+.+.+|+..... +.......+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~---------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGV-LFCPHHPAD---------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EECCCCCCC----------
Confidence 4689999999999999999999998763 34455667777631000 000000000
Q ss_pred HHHHHhcCCeEEEeeCchhH--HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 690 IEALSKHGGKVFSRAEPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 690 ~~~~~~~~~~v~~~~~p~~K--~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
....+ .|+-+ ..+++.+.-..+.+++|||...|+.+-+.|++-
T Consensus 96 ---------~~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 96 ---------NCSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ---------CCCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00001 22211 222222322346799999999999999999874
No 129
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.78 E-value=0.029 Score=52.25 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=55.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee-
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA- 704 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~- 704 (753)
..+++.+.++.|++.|+++.++|+.....+....+.. +.... ..+++..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f-----------------------------~~i~~~~~ 114 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF-----------------------------DLILGSDE 114 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC-----------------------------cEEEecCC
Confidence 3478999999999999999999999998888777664 32111 1122211
Q ss_pred ---CchhHHHHHHHHHHc---CCeEEEEcCCcccHHHhhhcC
Q 004437 705 ---EPRHKQEIVRMLKEM---GEVVAMTGDGVNDAPALKLAD 740 (753)
Q Consensus 705 ---~p~~K~~~v~~l~~~---~~~v~~~GDg~ND~~~l~~A~ 740 (753)
.|. ...+...+++. . .++++||..+|+.+-+.|+
T Consensus 115 ~~~Kp~-~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 115 FGAKPE-PEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CCCCcC-HHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 121 12222223322 4 7999999999999887765
No 130
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.75 E-value=0.028 Score=55.20 Aligned_cols=89 Identities=20% Similarity=0.133 Sum_probs=58.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+-|++.++++.|+++|+++.++|+-... +....+.+|+...-. ..+.+..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd----------------------------~i~~s~~ 155 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFD----------------------------FVVTSYE 155 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcc----------------------------eEEeecc
Confidence 57799999999999999999999986553 466677777732111 1111111
Q ss_pred ----Cchh--HHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCce
Q 004437 705 ----EPRH--KQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIG 742 (753)
Q Consensus 705 ----~p~~--K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg 742 (753)
.|+- =..+++.+.-....+++|||+. +|+.+=+.||+-
T Consensus 156 ~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 VGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 1221 1222333333356899999997 899998888764
No 131
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.66 E-value=0.012 Score=54.54 Aligned_cols=96 Identities=16% Similarity=0.094 Sum_probs=64.2
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
-.+||++.+.++.|+ .++++.++|.-....+..+.+.+++... +...++++++.. +
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~---~f~~i~~~~d~~--------------------~ 99 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY---FGYRRLFRDECV--------------------F 99 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC---EeeeEEECcccc--------------------c
Confidence 347999999999999 5799999999999999999999887421 111111111110 0
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
..|. =...++.+....+.+++|||..+|..+-+.|++-|.
T Consensus 100 ~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 100 VKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred cCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 1121 011223333346789999999999998877776654
No 132
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.62 E-value=0.051 Score=52.26 Aligned_cols=26 Identities=35% Similarity=0.432 Sum_probs=24.3
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDN 651 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~ 651 (753)
+.+++.+++++|++.|+++.++|..+
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 67999999999999999999999876
No 133
>PLN02940 riboflavin kinase
Probab=95.54 E-value=0.027 Score=61.01 Aligned_cols=94 Identities=15% Similarity=0.150 Sum_probs=62.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHH-HcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR-QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.+.++.|++.|+++.++|+.....+....+ ..|+...-. .++.++.. .+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd----~ii~~d~v--------------------~~ 148 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS----VIVGGDEV--------------------EK 148 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC----EEEehhhc--------------------CC
Confidence 467999999999999999999999998888776654 567632111 11111110 01
Q ss_pred eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 704 AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 704 ~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
..| +-=..+++.+.-..+.+++|||+.+|+.+-+.||+.
T Consensus 149 ~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 149 GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCE
Confidence 122 111333334433457899999999999999999974
No 134
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.54 E-value=0.039 Score=61.67 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=64.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++++++.. ..-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~----~i~~~d~v~-------------------~~~ 386 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT----ETFSIEQIN-------------------SLN 386 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc----eeEecCCCC-------------------CCC
Confidence 578999999999999999999999999999999999999853211 111111110 011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.|+-=...++.+ ....+++|||+.+|+.+-+.|++
T Consensus 387 kP~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~ 421 (459)
T PRK06698 387 KSDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGL 421 (459)
T ss_pred CcHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCC
Confidence 232111222222 24679999999999999999997
No 135
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.52 E-value=0.032 Score=50.16 Aligned_cols=39 Identities=5% Similarity=0.108 Sum_probs=34.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHcC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGD-NKSTAEAICRQIK 663 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd-~~~~a~~ia~~~g 663 (753)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777767666
No 136
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.45 E-value=0.035 Score=52.13 Aligned_cols=87 Identities=16% Similarity=0.183 Sum_probs=57.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDN---------------KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (753)
++-+++.+++++|+++|++++++|-.. ...+..+.+.+|+.- .
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f--d-------------------- 86 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF--D-------------------- 86 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce--e--------------------
Confidence 366899999999999999999999752 334556667777630 0
Q ss_pred HHHHHhcCCeEEE-----ee----CchhHHHHHHHH-HHc---CCeEEEEcCCcccHHHhhhcCceE
Q 004437 690 IEALSKHGGKVFS-----RA----EPRHKQEIVRML-KEM---GEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 690 ~~~~~~~~~~v~~-----~~----~p~~K~~~v~~l-~~~---~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..+++ .. .|. ..++..+ ++. ...++||||+.+|+.+-+.|++-.
T Consensus 87 --------~ii~~~~~~~~~~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 87 --------DVLICPHFPDDNCDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred --------EEEECCCCCCCCCCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 01111 00 122 2223222 222 457999999999999999999743
No 137
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.44 E-value=0.18 Score=60.20 Aligned_cols=38 Identities=11% Similarity=0.183 Sum_probs=32.5
Q ss_pred CCCCchhHHHHHHH-HhCCCeEEEEcCCChHHHHHHHHH
Q 004437 624 DPPRGGVDKAIDDC-RGAGIEVMVITGDNKSTAEAICRQ 661 (753)
Q Consensus 624 d~~r~~~~~~i~~l-~~~gi~v~i~TGd~~~~a~~ia~~ 661 (753)
-.+.+++.+++++| ++.|+.|+++|||...+.......
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 35678999999997 778999999999999998877644
No 138
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.22 E-value=0.082 Score=50.49 Aligned_cols=122 Identities=21% Similarity=0.285 Sum_probs=70.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcccccccc-----chh----------hhccCHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFT-----GKE----------FMALSSTQQ 689 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~-----~~~----------~~~~~~~~~ 689 (753)
.+-|++.++++.|++.=-.+++ |---..-+..+|..+|+.....+.....+. .++ ...+..+++
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~-STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVI-STSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccCCceEE-eccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3568999999999987444444 444455677899999985433221111111 000 011122222
Q ss_pred HHHHHhcCCeEEEeeCchh---------------HHHHHHHHHHc---CCeEEEEcCCcccHHHhhhcC-c-eEecCCCC
Q 004437 690 IEALSKHGGKVFSRAEPRH---------------KQEIVRMLKEM---GEVVAMTGDGVNDAPALKLAD-I-GVAMGITG 749 (753)
Q Consensus 690 ~~~~~~~~~~v~~~~~p~~---------------K~~~v~~l~~~---~~~v~~~GDg~ND~~~l~~A~-v-giamgi~g 749 (753)
.+.+. .+|.|..|.. |.++++.+.+. ....+++||++.|+.||+.+. - |+|+.-||
T Consensus 162 fe~lD----e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNG 237 (315)
T COG4030 162 FEKLD----ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNG 237 (315)
T ss_pred HHHHH----HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecC
Confidence 22222 2455555543 45555555443 345789999999999999984 3 36666677
Q ss_pred cc
Q 004437 750 TE 751 (753)
Q Consensus 750 ~~ 751 (753)
.+
T Consensus 238 Ne 239 (315)
T COG4030 238 NE 239 (315)
T ss_pred Cc
Confidence 65
No 139
>PRK09449 dUMP phosphatase; Provisional
Probab=95.08 E-value=0.069 Score=53.32 Aligned_cols=88 Identities=20% Similarity=0.178 Sum_probs=61.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|+ +|+++.++|......+....+.+|+...-. ..+.+..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----------------------------~v~~~~~ 145 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD----------------------------LLVISEQ 145 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC----------------------------EEEEECc
Confidence 36799999999999 689999999998888888888888742110 1222221
Q ss_pred ----CchhHHHHHHHHHHc----CCeEEEEcCCc-ccHHHhhhcCce
Q 004437 705 ----EPRHKQEIVRMLKEM----GEVVAMTGDGV-NDAPALKLADIG 742 (753)
Q Consensus 705 ----~p~~K~~~v~~l~~~----~~~v~~~GDg~-ND~~~l~~A~vg 742 (753)
.|. ..-+...+.+. .+.+++|||+. +|+.+=+.||+-
T Consensus 146 ~~~~KP~-p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 146 VGVAKPD-VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGID 191 (224)
T ss_pred cCCCCCC-HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCc
Confidence 222 22223333333 25799999998 799999999974
No 140
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.84 E-value=0.11 Score=55.21 Aligned_cols=90 Identities=14% Similarity=0.057 Sum_probs=58.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHH
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGD---------------NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQ 688 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 688 (753)
-++.|++.+++++|+++|++++|+|.- ....+..+.+..|+.- .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f--d------------------- 87 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF--D------------------- 87 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce--e-------------------
Confidence 357899999999999999999999984 1223445666666621 0
Q ss_pred HHHHHHhcCCeEEEe-----e--CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceE
Q 004437 689 QIEALSKHGGKVFSR-----A--EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 689 ~~~~~~~~~~~v~~~-----~--~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..+++- . ...-|..++..+.++ ...+.||||+.+|..+=+.|++-.
T Consensus 88 ---------~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 88 ---------EVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred ---------eEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 011110 0 011123334333222 478999999999999999999853
No 141
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=94.74 E-value=0.078 Score=52.83 Aligned_cols=87 Identities=18% Similarity=0.221 Sum_probs=63.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.+++.+.+++|++. ++++++|+-....+..+.+.+|+...- ..+++.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----------------------------d~i~~~~ 146 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-----------------------------DDIFVSE 146 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-----------------------------CEEEEcC
Confidence 5779999999999999 999999999998888889999884311 122221
Q ss_pred e----CchhH--HHHHHHH-HHcCCeEEEEcCCc-ccHHHhhhcCc
Q 004437 704 A----EPRHK--QEIVRML-KEMGEVVAMTGDGV-NDAPALKLADI 741 (753)
Q Consensus 704 ~----~p~~K--~~~v~~l-~~~~~~v~~~GDg~-ND~~~l~~A~v 741 (753)
. .|+.. ...++.+ .-....+++|||+. +|+.+=+.+|+
T Consensus 147 ~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~ 192 (224)
T TIGR02254 147 DAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGL 192 (224)
T ss_pred ccCCCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCC
Confidence 1 23221 3334444 32346799999998 89999999996
No 142
>PLN02811 hydrolase
Probab=94.68 E-value=0.1 Score=51.87 Aligned_cols=89 Identities=20% Similarity=0.196 Sum_probs=56.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHH-HHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEA-ICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.+.|+.|++.|+++.++||-....... ..+..++...- ..+++.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f-----------------------------~~i~~~ 128 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM-----------------------------HHVVTG 128 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC-----------------------------CEEEEC
Confidence 467999999999999999999999987653332 22222331100 112211
Q ss_pred e---------CchhHHHHHHHHH---HcCCeEEEEcCCcccHHHhhhcCce
Q 004437 704 A---------EPRHKQEIVRMLK---EMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 704 ~---------~p~~K~~~v~~l~---~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
- .|+-=...++.+. -..+.+++|||+..|+.+-+.||+-
T Consensus 129 ~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 129 DDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred ChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 1 1111133334443 2246799999999999999999973
No 143
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.61 E-value=0.18 Score=46.21 Aligned_cols=83 Identities=17% Similarity=0.275 Sum_probs=60.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
...|++++=+..++.+|+++.++|--+...+...++.+|+.. ++--.
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f---------------------------------i~~A~ 92 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF---------------------------------IYRAK 92 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce---------------------------------eeccc
Confidence 477899999999999999999999999999999999999842 22223
Q ss_pred CchhH--HHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcC
Q 004437 705 EPRHK--QEIVRMLKEMGEVVAMTGDGV-NDAPALKLAD 740 (753)
Q Consensus 705 ~p~~K--~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~ 740 (753)
.|--+ .+.++.++-..+.|+|+||.. .|+-+=+.|+
T Consensus 93 KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 93 KPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred CccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 34332 233444444477899999976 5766544444
No 144
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.58 E-value=0.18 Score=50.09 Aligned_cols=110 Identities=26% Similarity=0.342 Sum_probs=68.8
Q ss_pred CCCchhHHHHHHH--HhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchh-hhccCHHHHHHHHHhcCCeEE
Q 004437 625 PPRGGVDKAIDDC--RGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKE-FMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 625 ~~r~~~~~~i~~l--~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~ 701 (753)
|+.++.+++++.+ ++.|+.++++|.-+..-...+.+.-|+...-.. +++... +.. .....+...+ .+-+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~----I~TNpa~~~~---~G~l~v~pyh-~h~C 142 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE----IFTNPACFDA---DGRLRVRPYH-SHGC 142 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce----EEeCCceecC---CceEEEeCcc-CCCC
Confidence 5778999999999 568999999999999999999999998643211 111110 000 0000000000 1122
Q ss_pred EeeCc-hhHHHHHHHHHHc----C---CeEEEEcCCcccH-HHhh--hcCce
Q 004437 702 SRAEP-RHKQEIVRMLKEM----G---EVVAMTGDGVNDA-PALK--LADIG 742 (753)
Q Consensus 702 ~~~~p-~~K~~~v~~l~~~----~---~~v~~~GDg~ND~-~~l~--~A~vg 742 (753)
.++.| -=|..+++.+.+. | .+|+++|||.||. |+++ .+|+-
T Consensus 143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v 194 (234)
T PF06888_consen 143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVV 194 (234)
T ss_pred CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEE
Confidence 23333 2589999888765 4 6899999999994 5543 45543
No 145
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.47 E-value=0.16 Score=48.48 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=24.5
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCCh
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNK 652 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~ 652 (753)
+.|++.++|++|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 568999999999999999999998763
No 146
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.23 E-value=0.13 Score=48.68 Aligned_cols=40 Identities=13% Similarity=0.237 Sum_probs=31.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChH------------HHHHHHHHcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKS------------TAEAICRQIKLF 665 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~------------~a~~ia~~~gi~ 665 (753)
+-+++.+++++|+++|+++.++|..+.. .+..+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 3489999999999999999999975542 345677888873
No 147
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.22 E-value=0.22 Score=50.36 Aligned_cols=48 Identities=10% Similarity=0.164 Sum_probs=38.5
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHH--HHHHHcCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE--AICRQIKLF 665 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~--~ia~~~gi~ 665 (753)
|.+.-...+-|++.+++++|+++|+++.++|.-....+. ...+.+|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 455556778999999999999999999999996654443 566888885
No 148
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=94.08 E-value=0.18 Score=49.89 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=63.0
Q ss_pred ccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcC---CCCCCCccccccccchhhhccCHHHHHHHHHhcCC
Q 004437 622 LRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIK---LFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGG 698 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (753)
++-++.+++.+++++|+++|+++.++|..+......+.+..+ +...-.. .+ . .
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~----~f-----d---------------~ 147 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSG----YF-----D---------------T 147 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcce----EE-----E---------------e
Confidence 445789999999999999999999999998877666655542 2110000 00 0 0
Q ss_pred eEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 699 KVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 699 ~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.+...-.|+-=..+++.+.-..+.++++||...|+.+=+.||+-.
T Consensus 148 ~~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 148 TVGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred CcccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 111111122123444444434577999999999999999999854
No 149
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.02 E-value=0.18 Score=53.41 Aligned_cols=89 Identities=11% Similarity=0.105 Sum_probs=65.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ----IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
++.+++.++|+.|++.|+++.++|.-+...+..+.+. +++...- ..+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-----------------------------~~~ 81 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-----------------------------DAR 81 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-----------------------------eEE
Confidence 3578999999999999999999999999999988887 6663210 122
Q ss_pred EEeeCchhHHHHHHHHHH----cCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 701 FSRAEPRHKQEIVRMLKE----MGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
.+. +.-|...++...+ ....++++||...|+.+.+.+...+.
T Consensus 82 ~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~ 127 (320)
T TIGR01686 82 SIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKT 127 (320)
T ss_pred EEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCc
Confidence 222 3334444443333 34789999999999999999887653
No 150
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.91 E-value=0.13 Score=43.91 Aligned_cols=89 Identities=21% Similarity=0.305 Sum_probs=55.4
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHcCCCCCCCccccccccchhhhccCHHHHHHHHH
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI---CRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS 694 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~i---a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (753)
|++...+.+-|++.++|+.|+++|++++++|-....+...+ .+.+|+.-..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~-------------------------- 60 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE-------------------------- 60 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G--------------------------
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc--------------------------
Confidence 44555777889999999999999999999999876554443 3667774221
Q ss_pred hcCCeEEEeeCchhHHHHHHHHHH--cCCeEEEEcCCcccHHHhhhcCc
Q 004437 695 KHGGKVFSRAEPRHKQEIVRMLKE--MGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 695 ~~~~~v~~~~~p~~K~~~v~~l~~--~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
..++... ....+++++ .+..|.++|-. .....++.+|+
T Consensus 61 ---~~i~ts~-----~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 61 ---DEIITSG-----MAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp ---GGEEEHH-----HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred ---CEEEChH-----HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 1233221 233445554 37788888876 55666666553
No 151
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=93.61 E-value=0.39 Score=46.04 Aligned_cols=115 Identities=23% Similarity=0.291 Sum_probs=68.5
Q ss_pred CCCchhHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGI-EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi-~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
|+-|+..++|+.+++.|- .++|+|--|.--...+.+..|+..- ...+++....- .+.........+..+-+.+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~----F~~IfTNPa~~--da~G~L~v~pyH~~hsC~~ 157 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL----FSEIFTNPACV--DASGRLLVRPYHTQHSCNL 157 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH----HHHHhcCCccc--CCCCcEEeecCCCCCccCc
Confidence 577999999999999996 9999999998888888888887320 00011100000 0000000000000122222
Q ss_pred eCchh--HHHHHHHHHHc-------CCeEEEEcCCccc-HHHhhhcCceEecC
Q 004437 704 AEPRH--KQEIVRMLKEM-------GEVVAMTGDGVND-APALKLADIGVAMG 746 (753)
Q Consensus 704 ~~p~~--K~~~v~~l~~~-------~~~v~~~GDg~ND-~~~l~~A~vgiamg 746 (753)
.|.. |..++..++.. .+++.++|||.|| +|+++...--+||-
T Consensus 158 -CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 158 -CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred -CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 3332 67776665543 2378999999999 67777776666664
No 152
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.60 E-value=0.3 Score=45.74 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=66.9
Q ss_pred ccCCCCchhHHHHHHHHhCCC--eEEEEcCC-------ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHH
Q 004437 622 LRDPPRGGVDKAIDDCRGAGI--EVMVITGD-------NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEA 692 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi--~v~i~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (753)
=++.+.++..+.+++|++.+. +|+++|-- ....|..+++.+|+.
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--------------------------- 108 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--------------------------- 108 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc---------------------------
Confidence 356788999999999999986 59999986 478899999999983
Q ss_pred HHhcCCeEEEeeCchhHHHHHHHHHHc-----CCeEEEEcCCc-ccHHHhhhcC
Q 004437 693 LSKHGGKVFSRAEPRHKQEIVRMLKEM-----GEVVAMTGDGV-NDAPALKLAD 740 (753)
Q Consensus 693 ~~~~~~~v~~~~~p~~K~~~v~~l~~~-----~~~v~~~GDg~-ND~~~l~~A~ 740 (753)
...+....|.-..++++.++.+ .+.++|+||-. .|+-|=...+
T Consensus 109 -----vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 109 -----VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred -----EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 1123335776667888888765 67899999975 6877655555
No 153
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=93.56 E-value=0.16 Score=49.66 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=57.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ-IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.++++.|+++|+++.++|.-+.......... .++... .+..+.+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~----------------------------fd~v~~s~ 135 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA----------------------------ADHIYLSQ 135 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh----------------------------cCEEEEec
Confidence 4689999999999999999999999876654332221 232110 00112222
Q ss_pred e----Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 704 A----EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 704 ~----~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
. .|+ -=..+++.+.-....++++||...|+.+=+.||+-
T Consensus 136 ~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~ 180 (199)
T PRK09456 136 DLGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGIT 180 (199)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCE
Confidence 1 221 11233344433456799999999999999999984
No 154
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=93.49 E-value=0.13 Score=50.81 Aligned_cols=89 Identities=18% Similarity=0.109 Sum_probs=55.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHH--HHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKST--AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
++.+++.+.++.|+++|+++.++|...... ........++...- ..+++
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-----------------------------d~v~~ 144 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-----------------------------DAVVE 144 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-----------------------------CEEEE
Confidence 578999999999999999999999875433 22222223331100 12222
Q ss_pred e-----eCchh--HHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 703 R-----AEPRH--KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 703 ~-----~~p~~--K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
. ..|+- =..+++.+.-....+++|||...|+.+=+.||+-
T Consensus 145 s~~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 145 SCLEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred eeecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 1 12221 1223333333356799999999999999999973
No 155
>PLN02645 phosphoglycolate phosphatase
Probab=93.16 E-value=0.24 Score=52.13 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=38.8
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHcCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC---RQIKLF 665 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia---~~~gi~ 665 (753)
|++.-.+.+-+++.++|++|++.|++++++|++...+...++ +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444455667799999999999999999999999977766665 567774
No 156
>PLN03017 trehalose-phosphatase
Probab=93.03 E-value=1.7 Score=46.21 Aligned_cols=46 Identities=11% Similarity=0.095 Sum_probs=35.3
Q ss_pred CeEEEEEccccC--CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 004437 613 DLVFVGVVGLRD--PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659 (753)
Q Consensus 613 ~l~~lG~i~~~d--~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia 659 (753)
|.+++-+..-.| .+.+++.++|++|. .|++++++|||.......+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 344444333222 47899999999999 78999999999999988774
No 157
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=92.95 E-value=0.59 Score=43.10 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=68.7
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHc-----CCCCCCCccccccccchhhhccCHHHHHHHHHh
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE---AICRQI-----KLFSGNEDLTGRSFTGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~---~ia~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (753)
|..++++.+..++.++.|++++-+|+|+.-.+. ....+. ++.... ++.. .+.+...+.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gp------v~~s-------P~~l~~al~- 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGP------VLLS-------PDSLFSALH- 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCC------EEEC-------Ccchhhhhh-
Confidence 689999999999999999999999999965543 333333 332211 1111 001111111
Q ss_pred cCCeEEEeeCchhHHHHHHHHHHc-----CCeEEEEcCCcccHHHhhhcCce
Q 004437 696 HGGKVFSRAEPRHKQEIVRMLKEM-----GEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 696 ~~~~v~~~~~p~~K~~~v~~l~~~-----~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
..++.+-..+.|...++.++.. ...++++|...+|+.+.++++|-
T Consensus 92 --rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 --REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred --ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 1355555556788888888764 44678899999999998877763
No 158
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=92.12 E-value=0.68 Score=43.97 Aligned_cols=52 Identities=15% Similarity=0.273 Sum_probs=43.3
Q ss_pred EEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHcCCCC
Q 004437 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC---RQIKLFS 666 (753)
Q Consensus 615 ~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia---~~~gi~~ 666 (753)
.+-|.+.++|..-|++.+|+++|++++.+|..+|--..++-+.+. +.||+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 467999999999999999999999999999999988777665554 4566643
No 159
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=91.99 E-value=0.52 Score=45.27 Aligned_cols=87 Identities=11% Similarity=0.114 Sum_probs=61.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.+++.+++++|+ .+++++|.-+...+..+.+.+|+...- ..+++.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-----------------------------d~i~~~~ 131 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-----------------------------DGIFCFD 131 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-----------------------------CeEEEee
Confidence 36789999999997 478999999998899999999984311 112221
Q ss_pred --------eCchh--HHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 704 --------AEPRH--KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 704 --------~~p~~--K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..|.. =..+++.+......+++|||...|+.+=+.||+-.
T Consensus 132 ~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 132 TANPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred cccCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 12321 13334444444678999999999999988888754
No 160
>PHA02597 30.2 hypothetical protein; Provisional
Probab=91.84 E-value=0.66 Score=45.15 Aligned_cols=92 Identities=14% Similarity=0.133 Sum_probs=54.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+++++|++.+ +.+++|..+........+.+++......... ..+.++.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~------------------------~i~~~~~ 128 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFS------------------------EVLMCGH 128 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCccc------------------------EEEEecc
Confidence 36799999999999985 5666676555444445566666321100000 1122222
Q ss_pred CchhHHHHHH-HHHHcC-CeEEEEcCCcccHHHhhhc--Cce
Q 004437 705 EPRHKQEIVR-MLKEMG-EVVAMTGDGVNDAPALKLA--DIG 742 (753)
Q Consensus 705 ~p~~K~~~v~-~l~~~~-~~v~~~GDg~ND~~~l~~A--~vg 742 (753)
... |-.++. .+++.| +.+++|||..+|+.+-++| |+-
T Consensus 129 ~~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 129 DES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred Ccc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 221 333333 333333 4688999999999999999 873
No 161
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.77 E-value=0.43 Score=58.76 Aligned_cols=93 Identities=15% Similarity=0.185 Sum_probs=64.4
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|+++|+++.++|+.....+....+.+|+.... ...++.+++. .+..
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~---Fd~iv~~~~~--------------------~~~K 218 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM---FDAIVSADAF--------------------ENLK 218 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH---CCEEEECccc--------------------ccCC
Confidence 5689999999999999999999999999988888889884110 0011111110 1112
Q ss_pred ch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 706 PR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 706 p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
|+ -=...++.+.-..+.+++|||..+|+.+-+.|++
T Consensus 219 P~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 219 PAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred CCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCC
Confidence 22 1133344444445789999999999999999997
No 162
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=91.73 E-value=0.39 Score=47.93 Aligned_cols=81 Identities=22% Similarity=0.324 Sum_probs=56.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKS---TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+.-|++.+.++.+++.|++|+++|||+.. .+..-.++.|+... ..++
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~------------------------------~~l~ 164 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW------------------------------DHLI 164 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB------------------------------SCGE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc------------------------------chhc
Confidence 44478999999999999999999999765 23334566675321 1223
Q ss_pred EeeCc--------hhHHHHHHHHHHcCC-eEEEEcCCcccHHH
Q 004437 702 SRAEP--------RHKQEIVRMLKEMGE-VVAMTGDGVNDAPA 735 (753)
Q Consensus 702 ~~~~p--------~~K~~~v~~l~~~~~-~v~~~GDg~ND~~~ 735 (753)
.|... +-|..--+.+.+.|+ .++.+||..+|..-
T Consensus 165 lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 165 LRPDKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp EEEESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 33222 237777788888865 56779999999875
No 163
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.41 E-value=0.34 Score=49.06 Aligned_cols=46 Identities=26% Similarity=0.270 Sum_probs=36.3
Q ss_pred EEeeCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhc--------CceEecC
Q 004437 701 FSRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLA--------DIGVAMG 746 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A--------~vgiamg 746 (753)
-.+-.+.+|...++.+.+. ...++++||+.||.+|++.+ ..||+|+
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 3344566898888877655 35799999999999999999 5788884
No 164
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=91.34 E-value=0.34 Score=48.18 Aligned_cols=94 Identities=14% Similarity=0.159 Sum_probs=60.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.| ++++.++|+.....+....+..|+...-. ..+++++... +.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~---~~v~~~~~~~--------------------~~ 141 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP---DKLFSGYDIQ--------------------RW 141 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc---ceEeeHHhcC--------------------CC
Confidence 4568999999988 48999999998888888888888743210 0011111110 11
Q ss_pred Cc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 705 EP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 705 ~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
.| +-=..+.+.+.-..+.+++|||+.+|+.+=+.||+.+.
T Consensus 142 KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 142 KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 12 11123333333334679999999999999999998664
No 165
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.01 E-value=1.3 Score=44.67 Aligned_cols=81 Identities=20% Similarity=0.240 Sum_probs=52.7
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHH---HHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCe
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTA---EAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a---~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (753)
+.|.-|++.+..+.+++.|++|+++|||....- ..=.++.|+... ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~------------------------------~~ 192 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW------------------------------EK 192 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc------------------------------ce
Confidence 445668999999999999999999999985422 222344566421 23
Q ss_pred EEEeeCc--------hhHHHHHHHHHHcCC-eEEEEcCCcccH
Q 004437 700 VFSRAEP--------RHKQEIVRMLKEMGE-VVAMTGDGVNDA 733 (753)
Q Consensus 700 v~~~~~p--------~~K~~~v~~l~~~~~-~v~~~GDg~ND~ 733 (753)
++.|... +.|...-+.+.+.|+ +++.+||..+|.
T Consensus 193 LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 193 LILKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred eeecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 4445322 124343444455655 567899999997
No 166
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=90.47 E-value=0.52 Score=45.41 Aligned_cols=90 Identities=13% Similarity=0.132 Sum_probs=57.5
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhH
Q 004437 630 VDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHK 709 (753)
Q Consensus 630 ~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 709 (753)
..+.+..|++. ++..++|+.....+....+.+|+...-. .+++.++.. ...-.|+-=
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~------------------~~KP~p~~~ 148 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD----AVVAADDVQ------------------HHKPAPDTF 148 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce----EEEehhhcc------------------CCCCChHHH
Confidence 35889999865 8999999999999999999999853111 111111100 000111112
Q ss_pred HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 710 QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 710 ~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
...++.++-....+++|||..+|+.+=+.||+-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 333334433345799999999999999999974
No 167
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=90.41 E-value=1.3 Score=39.40 Aligned_cols=72 Identities=17% Similarity=0.135 Sum_probs=48.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHH---------------HHHHHcCCCCC------------CCccccccc
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE---------------AICRQIKLFSG------------NEDLTGRSF 676 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~---------------~ia~~~gi~~~------------~~~~~~~~~ 676 (753)
+++.+++.++++++++.|++++++|||+..... ....+-++... .-++....+
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~kp~~~~~~~~~dD~~i 102 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGKPWCGHDGFYVDDRAI 102 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCCCcCCCCCceecchhh
Confidence 668899999999999999999999999876533 33334444321 112334455
Q ss_pred cchhhhccCHHHHHHHHHh
Q 004437 677 TGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~ 695 (753)
.-++|..++.++...++..
T Consensus 103 r~~~~~~~~~~~~~~~~~~ 121 (126)
T TIGR01689 103 RPSEFSSLTYDEINTLTKI 121 (126)
T ss_pred CHHHHHhcCHHHHHHHHhh
Confidence 6666667776666665543
No 168
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.30 E-value=1.5 Score=44.58 Aligned_cols=49 Identities=6% Similarity=0.108 Sum_probs=39.6
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHcCCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITG---DNKSTAEAICRQIKLFS 666 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TG---d~~~~a~~ia~~~gi~~ 666 (753)
|.+.-.+.+-+++.++|++|+++|++++++|| +.........+.+|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33344556667999999999999999999996 77888888888899853
No 169
>PLN02423 phosphomannomutase
Probab=89.90 E-value=0.28 Score=49.65 Aligned_cols=39 Identities=23% Similarity=0.291 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHcCCeEEEEcC----CcccHHHhhh-cCceEecC
Q 004437 707 RHKQEIVRMLKEMGEVVAMTGD----GVNDAPALKL-ADIGVAMG 746 (753)
Q Consensus 707 ~~K~~~v~~l~~~~~~v~~~GD----g~ND~~~l~~-A~vgiamg 746 (753)
-+|...++.|+ ....|++||| |.||.+||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 36999999999 7889999999 8999999997 44588775
No 170
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=89.47 E-value=0.63 Score=46.26 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=70.7
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++.+++.+.+..|++.|+.+.+.|+-....+..+.+.+|+...-. ..+++++.. -..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~----~~v~~~dv~------------------~~K 142 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD----VIVTADDVA------------------RGK 142 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc----hhccHHHHh------------------cCC
Confidence 4688999999999999999999999999999999999999864221 122222111 112
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
-.|+-=....+.|.-....+++|.|+.+.+.+-++|+.-+
T Consensus 143 P~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 143 PAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 2344334455555445678999999999999999998643
No 171
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=88.12 E-value=2.6 Score=47.17 Aligned_cols=97 Identities=14% Similarity=0.063 Sum_probs=60.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ-IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
+++++.+ .++++|.+ +++|+-...-+..+|++ +|++.-. |.+++.. .+..+-.+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VI---------gTeLev~-----------~~G~~TG~i 166 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVL---------GTELEVS-----------KSGRATGFM 166 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEE---------ecccEEC-----------cCCEEeeee
Confidence 5666554 44567754 99999999999999987 8986310 0000000 00111122
Q ss_pred -----eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 704 -----AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 704 -----~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
+.-++|..-++..........+.||+.||.|||+.|+-+.+++
T Consensus 167 ~g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~ 214 (497)
T PLN02177 167 KKPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVP 214 (497)
T ss_pred cCCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeC
Confidence 1235577766643221122379999999999999999999887
No 172
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=86.30 E-value=1 Score=45.95 Aligned_cols=48 Identities=23% Similarity=0.348 Sum_probs=37.4
Q ss_pred EEccccCC----CCchhHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHcCCC
Q 004437 618 GVVGLRDP----PRGGVDKAIDDCRGAGIEVMVITGDNKST---AEAICRQIKLF 665 (753)
Q Consensus 618 G~i~~~d~----~r~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~ia~~~gi~ 665 (753)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 34444455 78899999999999999999999987765 44556667875
No 173
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=85.63 E-value=1.5 Score=44.84 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=38.2
Q ss_pred CC-chhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 626 PR-GGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r-~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
+| |++.+++++|+++|++++++|+.....+....+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999974
No 174
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=85.28 E-value=2.6 Score=43.54 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=35.2
Q ss_pred EccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHH---HHHHcCCC
Q 004437 619 VVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEA---ICRQIKLF 665 (753)
Q Consensus 619 ~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~---ia~~~gi~ 665 (753)
++.-.+.+-+++.++|++|+++|++++++|++...+... -.+.+|+.
T Consensus 12 tl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 12 VLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred ceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 334456677889999999999999999999987544333 34567774
No 175
>PRK10444 UMP phosphatase; Provisional
Probab=84.39 E-value=1 Score=45.60 Aligned_cols=48 Identities=13% Similarity=0.204 Sum_probs=40.2
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH---cCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ---IKLF 665 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~---~gi~ 665 (753)
|.+.-.+.+-|++.++|++|+++|++++++|++...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555677889999999999999999999999999887777666 4663
No 176
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=83.54 E-value=2.7 Score=38.88 Aligned_cols=88 Identities=19% Similarity=0.339 Sum_probs=61.3
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChH----HHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKS----TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+++=+++.|..-++.|=+++++|||... ++..+|+...|.... ..+|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~-----------------------------pv~f 165 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN-----------------------------PVIF 165 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc-----------------------------ceee
Confidence 5666788888888999999999999764 345667777764322 4566
Q ss_pred EeeCch-hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eE
Q 004437 702 SRAEPR-HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GV 743 (753)
Q Consensus 702 ~~~~p~-~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-gi 743 (753)
+...|. .+..-..++++.+ .-..-||+-||+.|-+.|++ ||
T Consensus 166 ~Gdk~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgI 208 (237)
T COG3700 166 AGDKPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred ccCCCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccce
Confidence 665551 1223344555554 44678999999999999986 54
No 177
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=82.32 E-value=1 Score=42.25 Aligned_cols=93 Identities=12% Similarity=0.039 Sum_probs=61.3
Q ss_pred ccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 622 LRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+.=..||++.+.++.|.+. +.+++.|-.....|..+.+.++..... + ..++
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~--f--------------------------~~~l 89 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKV--I--------------------------SRRL 89 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCE--E--------------------------eEEE
Confidence 3345899999999999988 999999999999999999988863210 0 0122
Q ss_pred Eee-CchhHHHHHHHHH---HcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 702 SRA-EPRHKQEIVRMLK---EMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 702 ~~~-~p~~K~~~v~~l~---~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
+|- ....|..+++.|. .....|+++||...|..+=+.+++=|
T Consensus 90 ~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 90 YRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred EccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 221 1101111333333 33467999999999887655555433
No 178
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=82.06 E-value=2.4 Score=42.69 Aligned_cols=86 Identities=12% Similarity=0.024 Sum_probs=52.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++-+++.++++.|++. +++.++|..+.. .+..|+...-. ..+.+.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd----------------------------~i~~~~~ 158 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE----------------------------FVLRAGP 158 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc----------------------------eeEeccc
Confidence 4668999999999975 889999886643 24455521100 112121
Q ss_pred ---eCchhH--HHHHHHHHHcCCeEEEEcCC-cccHHHhhhcCceEe
Q 004437 704 ---AEPRHK--QEIVRMLKEMGEVVAMTGDG-VNDAPALKLADIGVA 744 (753)
Q Consensus 704 ---~~p~~K--~~~v~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgia 744 (753)
..|.-. ...++.+.-....++||||. ..|+.+=+.||+-.+
T Consensus 159 ~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 159 HGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred CCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 122211 12223333235679999999 599999999987544
No 179
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=81.98 E-value=11 Score=35.83 Aligned_cols=98 Identities=24% Similarity=0.310 Sum_probs=60.4
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHH----hcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS----KHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~ 701 (753)
+.+++.+|+.+|+++|++++|+|--. ||.. ..+++..|.....- ....+. +.+...+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~r-------gyf~~~~f~~~~~~-m~~~l~~~gv~id~i~~ 92 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGR-------GYFTEADFDKLHNK-MLKILASQGVKIDGILY 92 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------Cccc-------cCccHHHHHHHHHH-HHHHHHHcCCccceEEE
Confidence 56899999999999999999999643 2211 11222222222111 111111 1123455
Q ss_pred EeeCchh--------HHHHHHHHHHcC---CeEEEEcCCcccHHHhhhcCce
Q 004437 702 SRAEPRH--------KQEIVRMLKEMG---EVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 702 ~~~~p~~--------K~~~v~~l~~~~---~~v~~~GDg~ND~~~l~~A~vg 742 (753)
|.-.|++ ...+.+.+++.+ ....+|||...|+.+=..|+++
T Consensus 93 Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 93 CPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 5555553 356666777664 6789999999999987777664
No 180
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=80.76 E-value=3 Score=42.65 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=37.2
Q ss_pred CC-chhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 626 PR-GGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r-~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 45 999999999999999999999888888899999999964
No 181
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=79.62 E-value=7.5 Score=43.74 Aligned_cols=39 Identities=13% Similarity=0.285 Sum_probs=31.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCCh------------HHHHHHHHHcCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNK------------STAEAICRQIKL 664 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~------------~~a~~ia~~~gi 664 (753)
+-+++.++|+.|++.|++++|+|.-.. ..+..+.+++|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 469999999999999999999998655 235566777776
No 182
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=79.08 E-value=6.5 Score=38.98 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=35.6
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
=++.+++.+++++++.. ++++++|--....+....+++|+.
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~ 138 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL 138 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh
Confidence 35678899999999999 999999998888888999999974
No 183
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=77.92 E-value=21 Score=36.29 Aligned_cols=52 Identities=13% Similarity=0.066 Sum_probs=40.0
Q ss_pred CeEEEEEccccCCCCchhHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHcCC
Q 004437 613 DLVFVGVVGLRDPPRGGVDKAIDDCRGAG-IEVMVITGDNKSTAEAICRQIKL 664 (753)
Q Consensus 613 ~l~~lG~i~~~d~~r~~~~~~i~~l~~~g-i~v~i~TGd~~~~a~~ia~~~gi 664 (753)
-++-+..--....+-++..+.+++|.... ..|+|+|||+.........-.|+
T Consensus 28 Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 28 TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 34444555566678899999999999984 57999999999988877764444
No 184
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=73.77 E-value=21 Score=35.20 Aligned_cols=83 Identities=12% Similarity=0.151 Sum_probs=53.0
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHH----HHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKST----AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+-||+.+.++...+.|.+|..+|-|..+. +..-.++.||...... ..++
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~---------------------------~~ll 175 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLES---------------------------HLLL 175 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccccc---------------------------ceEE
Confidence 44899999999999999999999998765 3344666677542211 1222
Q ss_pred EeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHh
Q 004437 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPAL 736 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l 736 (753)
-+ ....|..-.+.+++.-..||.+||..+|-...
T Consensus 176 kk-~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~ 209 (274)
T COG2503 176 KK-DKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDN 209 (274)
T ss_pred ee-CCCcHHHHHHHHhhccceeeEecCchhhhcch
Confidence 22 12223333333444556788899999886543
No 185
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=72.98 E-value=4.9 Score=38.02 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=51.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.++++ ++.++|.-+........+.+|+...-. .++++++. ...
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd----~v~~~~~~--------------------~~~ 138 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFD----RAFSVDTV--------------------RAY 138 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHh----hhccHhhc--------------------CCC
Confidence 47789999988 378999988888888888888742110 01111110 011
Q ss_pred CchhH--HHHHHHHHHcCCeEEEEcCCcccHHHhhh
Q 004437 705 EPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKL 738 (753)
Q Consensus 705 ~p~~K--~~~v~~l~~~~~~v~~~GDg~ND~~~l~~ 738 (753)
.|+-. ..+.+.+.-....++||||+..|+.+=++
T Consensus 139 KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 139 KPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 22221 34444444445789999999999887554
No 186
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=71.31 E-value=22 Score=33.52 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=31.4
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcC-CChHHHHHHHHHcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITG-DNKSTAEAICRQIKLF 665 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TG-d~~~~a~~ia~~~gi~ 665 (753)
+-++++++++.|++.|+++.++|- +.+.-|+.+.+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 679999999999999999999995 6788999999999997
No 187
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=69.66 E-value=16 Score=38.75 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=64.9
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHc-C-------CCCCCCcccccccc----------chhhhccCHHH
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQI-K-------LFSGNEDLTGRSFT----------GKEFMALSSTQ 688 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~-g-------i~~~~~~~~~~~~~----------~~~~~~~~~~~ 688 (753)
-|++.+.+++|+++|+++.++|.-+...+..+.+.+ | +..- ...+++ +..|.....+.
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y----FD~IIt~a~KP~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY----FDVVIVDARKPGFFTEGRPFRQVDVET 261 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh----CcEEEeCCCCCcccCCCCceEEEeCCC
Confidence 579999999999999999999999999999998886 6 3211 111111 11221111100
Q ss_pred H-H---H--HHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCc-ccHHHhh-hcC
Q 004437 689 Q-I---E--ALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGV-NDAPALK-LAD 740 (753)
Q Consensus 689 ~-~---~--~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~-~A~ 740 (753)
- . . .+.+ ..|++..+-. .+.+.+...+..|++|||.. .|+-.-+ .++
T Consensus 262 g~~~~~~~~~l~~--g~vY~gGn~~---~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~G 316 (343)
T TIGR02244 262 GSLKWGEVDGLEP--GKVYSGGSLK---QFHELLKWRGKEVLYFGDHIYGDLLRSKKKRG 316 (343)
T ss_pred CcccCCccccccC--CCeEeCCCHH---HHHHHHCCCCCcEEEECCcchHHHHhhHHhcC
Confidence 0 0 0 0111 2355544433 45566667789999999976 6877655 554
No 188
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=67.15 E-value=2e+02 Score=36.08 Aligned_cols=23 Identities=9% Similarity=-0.081 Sum_probs=13.1
Q ss_pred HHHHHHHHHHhhhccceEEEEEE
Q 004437 558 WQLMLSRHLEMSSKGLRCLGMAY 580 (753)
Q Consensus 558 ~~~~~~~~~~~~~~G~rvl~~A~ 580 (753)
|+...+.++.+.+.|.||..+.-
T Consensus 658 r~~~~~~I~~l~~agi~v~miTG 680 (1054)
T TIGR01657 658 KPDTKEVIKELKRASIRTVMITG 680 (1054)
T ss_pred CccHHHHHHHHHHCCCeEEEECC
Confidence 44445556666666666665553
No 189
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=62.93 E-value=9.2 Score=38.96 Aligned_cols=45 Identities=20% Similarity=0.332 Sum_probs=38.1
Q ss_pred EEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 004437 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661 (753)
Q Consensus 617 lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~ 661 (753)
=|++.--+.+=|++.++|++|+++|++++++|-.+..+...++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 477778888999999999999999999999999887777644443
No 190
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=62.26 E-value=12 Score=38.03 Aligned_cols=97 Identities=13% Similarity=0.143 Sum_probs=54.5
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHH---hcCCeEEEe
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS---KHGGKVFSR 703 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~ 703 (753)
-++..++++.|++.+++..++|+....-........|+ ..+...+. .....++..
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~----------------------g~~~~~i~~~~~~~~~~~gK 179 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDV----------------------GPFVTALEYATDTKATVVGK 179 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCc----------------------hHHHHHHHHHhCCCceeecC
Confidence 46788999999999999999998765433211111111 01111111 101112222
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCc-eEec
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADI-GVAM 745 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~v-giam 745 (753)
-.|+-=..+++.+.-....++||||.. +|+.+=+.+++ ++.+
T Consensus 180 P~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 223 (257)
T TIGR01458 180 PSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV 223 (257)
T ss_pred CCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 222222333444443457899999996 99999899886 3433
No 191
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=61.04 E-value=68 Score=32.95 Aligned_cols=151 Identities=11% Similarity=0.134 Sum_probs=92.2
Q ss_pred HHHHHHHHHhhhccceEEEEEEeccc--cccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHH
Q 004437 559 QLMLSRHLEMSSKGLRCLGMAYKDEL--GEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDD 636 (753)
Q Consensus 559 ~~~~~~~~~~~~~G~rvl~~A~k~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~ 636 (753)
.++...+.++.++||.++.++.+.=+ .-...|... .. ....+......+. ...-++++.-.-...++..+.++.
T Consensus 100 ~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~--~~-~vv~~~~d~~~l~-~~~~v~vvsQTT~~~~~~~~i~~~ 175 (280)
T TIGR00216 100 TKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPD--KA-IVVETLEDLENFK-VEDLLGVVSQTTLSQEDTKEIVAE 175 (280)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCC--CE-EEECCHHHHHhCC-CCCcEEEEEcCCCcHHHHHHHHHH
Confidence 56778889999999999999977511 111111100 00 0000001111111 112377777777778888888888
Q ss_pred HHhCC----C----eEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchh
Q 004437 637 CRGAG----I----EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRH 708 (753)
Q Consensus 637 l~~~g----i----~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 708 (753)
|++.. + .++-.|-+....++.+|+++.+ ..|...-....
T Consensus 176 l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~---------------------------------miVVGg~nSsN 222 (280)
T TIGR00216 176 LKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDL---------------------------------MIVIGGKNSSN 222 (280)
T ss_pred HHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCE---------------------------------EEEECCCCCch
Confidence 88765 1 3667777778888888888765 23444444555
Q ss_pred HHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcC-ceEecC
Q 004437 709 KQEIVRMLKEMGEVVAMTGDGV-NDAPALKLAD-IGVAMG 746 (753)
Q Consensus 709 K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~-vgiamg 746 (753)
-.++.+..++.|..+..+.+.. -|..+|+.++ |||.=|
T Consensus 223 T~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAG 262 (280)
T TIGR00216 223 TTRLYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAG 262 (280)
T ss_pred HHHHHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 5677777777777777776533 3566777664 688777
No 192
>PTZ00445 p36-lilke protein; Provisional
Probab=58.92 E-value=20 Score=34.81 Aligned_cols=74 Identities=8% Similarity=0.075 Sum_probs=45.8
Q ss_pred HHHHHHHHHhhhccceEEEEEEec-cccc-cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHH
Q 004437 559 QLMLSRHLEMSSKGLRCLGMAYKD-ELGE-FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDD 636 (753)
Q Consensus 559 ~~~~~~~~~~~~~G~rvl~~A~k~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~ 636 (753)
+......+.+.+.|.|++++-+.. +... ...|... .. ....+--.++|+.+.-+++
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~-----------------~~-----~~~~~~~~~tpefk~~~~~ 86 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDP-----------------DN-----DDIRVLTSVTPDFKILGKR 86 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCC-----------------Cc-----chhhhhccCCHHHHHHHHH
Confidence 445566777899999999876532 0000 0000000 00 0112223479999999999
Q ss_pred HHhCCCeEEEEcCCChHH
Q 004437 637 CRGAGIEVMVITGDNKST 654 (753)
Q Consensus 637 l~~~gi~v~i~TGd~~~~ 654 (753)
|+++||+|+++|=-....
T Consensus 87 l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 87 LKNSNIKISVVTFSDKEL 104 (219)
T ss_pred HHHCCCeEEEEEccchhh
Confidence 999999999999766543
No 193
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=58.01 E-value=28 Score=31.36 Aligned_cols=80 Identities=15% Similarity=0.230 Sum_probs=53.5
Q ss_pred HhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC--eE
Q 004437 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI--EV 644 (753)
Q Consensus 567 ~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi--~v 644 (753)
-+...|++|+-++.....+++.+- ..+.+-.++|+-++--.--+..++.++.|+++|. .+
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~a------------------a~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~ 85 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKA------------------AIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGIL 85 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHH------------------HHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCE
Confidence 456799999988876543332211 1234556788878777777889999999999987 45
Q ss_pred EEEcCCCh---HH---HHHHHHHcCC
Q 004437 645 MVITGDNK---ST---AEAICRQIKL 664 (753)
Q Consensus 645 ~i~TGd~~---~~---a~~ia~~~gi 664 (753)
+++-|-.. .. ...-++++|+
T Consensus 86 vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 86 LYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred EEecCCcCcChhhhHHHHHHHHHcCC
Confidence 66666421 11 2345888997
No 194
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=57.22 E-value=73 Score=33.05 Aligned_cols=152 Identities=14% Similarity=0.127 Sum_probs=84.4
Q ss_pred HHHHHHHHHhhhccceEEEEEEecc--ccccccccccCcccccccCCCcccccCC-CCeEEEEEccccCCCCchhHHHHH
Q 004437 559 QLMLSRHLEMSSKGLRCLGMAYKDE--LGEFSDYYSESHPAHKKLLDPSCYSTIE-SDLVFVGVVGLRDPPRGGVDKAID 635 (753)
Q Consensus 559 ~~~~~~~~~~~~~G~rvl~~A~k~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~l~~lG~i~~~d~~r~~~~~~i~ 635 (753)
.++...+.++.++||.++.++.+.= ..-...|... ......+......++ .+..-++++.-.-..+++..+.++
T Consensus 100 ~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~---~~~vv~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~ 176 (298)
T PRK01045 100 TKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPG---GVYLVESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEIIA 176 (298)
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCC---CEEEEcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHHH
Confidence 5677788999999999999997651 1111111100 000000111111111 122346777766677777777777
Q ss_pred HHHhCCCe--------EEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCch
Q 004437 636 DCRGAGIE--------VMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPR 707 (753)
Q Consensus 636 ~l~~~gi~--------v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 707 (753)
.|++..-. ++-.|-+....++.+|+++.+ ..|...-...
T Consensus 177 ~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~---------------------------------miVVGg~~Ss 223 (298)
T PRK01045 177 ALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADL---------------------------------VIVVGSKNSS 223 (298)
T ss_pred HHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCE---------------------------------EEEECCCCCc
Confidence 77766422 344666667777777776654 1334444444
Q ss_pred hHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhc-CceEecC
Q 004437 708 HKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLA-DIGVAMG 746 (753)
Q Consensus 708 ~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A-~vgiamg 746 (753)
.-.++.+..++.+..+..+.+-. -|...|+.. -|||.=|
T Consensus 224 NT~kL~~i~~~~~~~t~~Ie~~~el~~~~l~~~~~VGitaG 264 (298)
T PRK01045 224 NSNRLREVAEEAGAPAYLIDDASEIDPEWFKGVKTVGVTAG 264 (298)
T ss_pred cHHHHHHHHHHHCCCEEEECChHHCcHHHhcCCCEEEEEec
Confidence 45566666666666666665532 244566644 4777766
No 195
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=54.43 E-value=20 Score=36.01 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=50.9
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCc
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP 706 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 706 (753)
-++..++++.+++.|++. ++|......+.......|. ..+...+............|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~----------------------g~~~~~i~~~g~~~~~~gKP 196 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGA----------------------GYYAELIKQLGGKVIYSGKP 196 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecc----------------------cHHHHHHHHhCCcEecCCCC
Confidence 478899999999899997 7787665433222121211 01111111111112112233
Q ss_pred hhH--HHHHHHHHHc-CCeEEEEcCC-cccHHHhhhcCceE
Q 004437 707 RHK--QEIVRMLKEM-GEVVAMTGDG-VNDAPALKLADIGV 743 (753)
Q Consensus 707 ~~K--~~~v~~l~~~-~~~v~~~GDg-~ND~~~l~~A~vgi 743 (753)
+.. ..+++.+... ...++|+||. .+|+.+=+.|++-.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 197 YPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred CHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 321 2333333322 3479999999 69999988888743
No 196
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=53.97 E-value=29 Score=34.69 Aligned_cols=46 Identities=22% Similarity=0.301 Sum_probs=34.2
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNE 669 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~ 669 (753)
-.+|+++.+.++.|++.+|.+.++|+--......+.++-|...++.
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv 134 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV 134 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe
Confidence 3589999999999999999999999988888888888877765543
No 197
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=53.86 E-value=1.7e+02 Score=36.14 Aligned_cols=29 Identities=10% Similarity=0.069 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHHHHHhhhccceEEEEEEe
Q 004437 553 LDEPCWQLMLSRHLEMSSKGLRCLGMAYK 581 (753)
Q Consensus 553 l~~~~~~~~~~~~~~~~~~G~rvl~~A~k 581 (753)
+.+..|+...+.++.+.+.|.++..+.-.
T Consensus 576 ~~Dplr~~~~~aI~~l~~aGI~v~miTGD 604 (941)
T TIGR01517 576 IKDPLRPGVREAVQECQRAGITVRMVTGD 604 (941)
T ss_pred ccCCCchhHHHHHHHHHHCCCEEEEECCC
Confidence 34455677788899999999999887754
No 198
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=53.68 E-value=41 Score=30.48 Aligned_cols=81 Identities=17% Similarity=0.288 Sum_probs=55.8
Q ss_pred HHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC-e-
Q 004437 566 LEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI-E- 643 (753)
Q Consensus 566 ~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi-~- 643 (753)
.-+..+|++|+.++.....+++.. ...+.+-.++|+-.+...-.+.+++.++.|++.|. .
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e~i~~------------------~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~ 86 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQEEFID------------------AAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDI 86 (137)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHH------------------HHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCC
Confidence 346689999999887643322211 11234556788888888999999999999999965 2
Q ss_pred EEEEcCCC------hHHHHHHHHHcCC
Q 004437 644 VMVITGDN------KSTAEAICRQIKL 664 (753)
Q Consensus 644 v~i~TGd~------~~~a~~ia~~~gi 664 (753)
.+++-|.. ......-++++|+
T Consensus 87 ~i~vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 87 LLYVGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred eEEEECCCCCCccChHHHHHHHHHcCC
Confidence 35555654 3445567888887
No 199
>PLN02423 phosphomannomutase
Probab=53.34 E-value=20 Score=36.17 Aligned_cols=32 Identities=16% Similarity=0.198 Sum_probs=27.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEA 657 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ 657 (753)
++.+++.++|++|++. ++++++|||.......
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~ 55 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKISE 55 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHH
Confidence 5889999999999987 9999999997765543
No 200
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=50.09 E-value=67 Score=33.88 Aligned_cols=48 Identities=21% Similarity=0.264 Sum_probs=38.1
Q ss_pred EEccccCCCCchhHHHHHHHHhC----CCeEEEEcCCC---hHH-HHHHHHHcCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGA----GIEVMVITGDN---KST-AEAICRQIKLF 665 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~----gi~v~i~TGd~---~~~-a~~ia~~~gi~ 665 (753)
|++.-.+++-+++.++++.|+.. |+++.++|-.. ... +..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 66777788999999999999998 99999999554 333 44556778874
No 201
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=50.04 E-value=3.7e+02 Score=33.07 Aligned_cols=198 Identities=19% Similarity=0.167 Sum_probs=98.8
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (753)
+++-++-+|..+++.....|.+..++-.....+|-.+ +++-|...+.....+.+++..+.......
T Consensus 41 ~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~-------------f~~~~~~iL~~~a~~s~~~~~~~~~~~~~- 106 (917)
T COG0474 41 PTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQ-------------FKDPFIILLLVAALLSAFVGDWVDAGVDA- 106 (917)
T ss_pred cccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHH-------------HHHHHHHHHHHHHHHHHHhhcccccCcce-
Confidence 4556777888888886555555544433333333222 22222222223333333333321110010
Q ss_pred CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhccc------ccE----EEeCCeeeeeecCCCCCCCcE
Q 004437 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCE------SGK----VLRDGYLVPDLPAIGLVPGDI 156 (753)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~------~~~----V~R~g~~~~~i~~~~Lv~GDI 156 (753)
++ .++++++..+..++..++..++-++++++...... ... -+.-|..+ .+...|.+|-|.
T Consensus 107 --------~~-I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV-~l~~gd~vPAD~ 176 (917)
T COG0474 107 --------IV-ILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIV-LLEAGDVVPADL 176 (917)
T ss_pred --------ee-ehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEE-EECCCCccccce
Confidence 11 22334444455578889998888888887654322 111 12446665 499999999999
Q ss_pred EEecCCCcccccEEEEEeeCCcEEEEc--ccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEcc
Q 004437 157 VELGVGDKVPADMRVAALKTSSLRVEQ--SSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGM 234 (753)
Q Consensus 157 I~l~~G~~iPaD~~vl~~~s~~~~Vde--s~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~ 234 (753)
..|+..+ .-+|=-.+.++| .-|+- ...+.+..|... +..+..-.|..+.+|+-..--...|.-+..|.
T Consensus 177 rLl~~~~-l~VdEs~LTGES--~pv~K~~~~~~~~~~~~~~-------d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ 246 (917)
T COG0474 177 RLLESSD-LEVDESALTGES--LPVEKQALPLTKSDAPLGL-------DRDNMLFSGTTVVSGRAKGIVVATGFETEFGK 246 (917)
T ss_pred EEEEecC-ceEEcccccCCC--cchhccccccccccccccC-------CccceEEeCCEEEcceEEEEEEEEcCccHHHH
Confidence 9999877 333322222211 12211 112223333330 12234445778888884433344555555555
Q ss_pred chhH
Q 004437 235 NTEI 238 (753)
Q Consensus 235 ~t~~ 238 (753)
.+..
T Consensus 247 ia~~ 250 (917)
T COG0474 247 IARL 250 (917)
T ss_pred HHHh
Confidence 4444
No 202
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=50.02 E-value=30 Score=34.69 Aligned_cols=48 Identities=21% Similarity=0.295 Sum_probs=36.4
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHH-cCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVIT---GDNKSTAEAICRQ-IKLF 665 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~ia~~-~gi~ 665 (753)
|++.-.+.+-+++.++|+.++++|++++++| |++.........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4444556667799999999999999999998 7777665554444 6764
No 203
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=49.89 E-value=14 Score=23.00 Aligned_cols=15 Identities=40% Similarity=0.596 Sum_probs=12.6
Q ss_pred CCCCCHHHHHHHHHh
Q 004437 25 DKGLSSREVEKRRER 39 (753)
Q Consensus 25 ~~GL~~~~~~~r~~~ 39 (753)
+.|||.+|+++|+..
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 569999999999875
No 204
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=48.05 E-value=9.2 Score=31.03 Aligned_cols=23 Identities=26% Similarity=0.459 Sum_probs=16.8
Q ss_pred ecCCCCCCCcEEEe-cCCCccccc
Q 004437 146 LPAIGLVPGDIVEL-GVGDKVPAD 168 (753)
Q Consensus 146 i~~~~Lv~GDII~l-~~G~~iPaD 168 (753)
+.-.+|.+||.|.+ ++||.||-=
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I 68 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKI 68 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEE
T ss_pred HHHcCCCCCCEEEEEECCCccceE
Confidence 45578999998888 689999963
No 205
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=47.37 E-value=26 Score=27.73 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=25.5
Q ss_pred HHHHHHHcCCeEEEEcCC-cccHHHhhhcCc-eEecC
Q 004437 712 IVRMLKEMGEVVAMTGDG-VNDAPALKLADI-GVAMG 746 (753)
Q Consensus 712 ~v~~l~~~~~~v~~~GDg-~ND~~~l~~A~v-giamg 746 (753)
+.+.+.-....++||||. ..|+.+=+.+++ +|.+.
T Consensus 13 a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~ 49 (75)
T PF13242_consen 13 ALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVL 49 (75)
T ss_dssp HHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEES
T ss_pred HHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEEC
Confidence 344444345689999999 999999999986 44443
No 206
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=47.09 E-value=27 Score=30.79 Aligned_cols=81 Identities=14% Similarity=0.211 Sum_probs=55.0
Q ss_pred HhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC-e-E
Q 004437 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI-E-V 644 (753)
Q Consensus 567 ~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi-~-v 644 (753)
-+...|++|+.++-.....+... ...+.+-.++++-.......+.+++.++.|+++|. + .
T Consensus 22 ~l~~~G~~vi~lG~~vp~e~~~~------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~ 83 (122)
T cd02071 22 ALRDAGFEVIYTGLRQTPEEIVE------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDIL 83 (122)
T ss_pred HHHHCCCEEEECCCCCCHHHHHH------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCE
Confidence 46789999988775432211111 11134456788888888899999999999999977 4 4
Q ss_pred EEEcCCChHHHHHHHHHcCCC
Q 004437 645 MVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 645 ~i~TGd~~~~a~~ia~~~gi~ 665 (753)
+++-|..+..-..-+++.|++
T Consensus 84 i~~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 84 VVGGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred EEEECCCCHHHHHHHHHCCCC
Confidence 566666655445667789984
No 207
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=46.36 E-value=52 Score=34.09 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=28.8
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCCChHHHH-HHHHHcCCC
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAE-AICRQIKLF 665 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~-~ia~~~gi~ 665 (753)
.+++...-+.|+..|.+++++|.+....+. ...+.++..
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 356667778888899999999988766544 556666653
No 208
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=45.88 E-value=1.5e+02 Score=30.42 Aligned_cols=151 Identities=13% Similarity=0.065 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhhccceEEEEEEeccc--cccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHH
Q 004437 559 QLMLSRHLEMSSKGLRCLGMAYKDEL--GEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDD 636 (753)
Q Consensus 559 ~~~~~~~~~~~~~G~rvl~~A~k~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~ 636 (753)
.+....+.++.++||.++.++.+.=+ .-...+... ......+......++ ...-++++.-.-...++..+.++.
T Consensus 103 ~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~---~~~vv~~~~d~~~l~-~~~kv~~vsQTT~~~~~~~~iv~~ 178 (281)
T PRK12360 103 KKIQNIVEEYYNKGYSIIIVGDKNHPEVIGINGWCDN---SAYIVNSIEEVENIP-FLDKACVVAQTTIIPELWEDILNV 178 (281)
T ss_pred hHHHHHHHHHHhCCCEEEEEcCCCCceeeEeccCcCC---CeEEECCHHHHhhCc-cccCEEEEECCCCcHHHHHHHHHH
Confidence 56777889999999999999976511 100111100 000000000111111 012366666666677777777777
Q ss_pred HHhCCCe------EEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHH
Q 004437 637 CRGAGIE------VMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQ 710 (753)
Q Consensus 637 l~~~gi~------v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 710 (753)
|++..-. ++-.|-+....++.+|+++.+ ..|........-.
T Consensus 179 l~~~~~~~~v~~TIC~aT~~RQ~a~~~La~~vD~---------------------------------miVVGg~~SsNT~ 225 (281)
T PRK12360 179 IKLKSKELVFFNTICSATKKRQESAKELSKEVDV---------------------------------MIVIGGKHSSNTQ 225 (281)
T ss_pred HHHhCcccccCCCcchhhhhHHHHHHHHHHhCCE---------------------------------EEEecCCCCccHH
Confidence 7766432 444566666666777776655 2344444444556
Q ss_pred HHHHHHHHcCCeEEEEcCC-cccHHHhhhc-CceEecC
Q 004437 711 EIVRMLKEMGEVVAMTGDG-VNDAPALKLA-DIGVAMG 746 (753)
Q Consensus 711 ~~v~~l~~~~~~v~~~GDg-~ND~~~l~~A-~vgiamg 746 (753)
++.+..++.+..+..+.+- .-|...|+.+ .|||.=|
T Consensus 226 rL~eia~~~~~~t~~Ie~~~el~~~~~~~~~~VGitaG 263 (281)
T PRK12360 226 KLVKICEKNCPNTFHIETADELDLEMLKDYKIIGITAG 263 (281)
T ss_pred HHHHHHHHHCCCEEEECChHHCCHHHhCCCCEEEEEcc
Confidence 6777777777666666553 3366677755 4888777
No 209
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=44.92 E-value=49 Score=27.91 Aligned_cols=33 Identities=30% Similarity=0.481 Sum_probs=26.5
Q ss_pred ccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcc
Q 004437 131 CESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKV 165 (753)
Q Consensus 131 ~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~i 165 (753)
...-+|.-||+.. -++.++++||+|.|.-|...
T Consensus 31 ~~~GrV~vNG~~a--KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 31 IEGGRVKVNGQRA--KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred HHCCeEEECCEEc--ccccccCCCCEEEEEeCCcE
Confidence 3445778888874 79999999999999988754
No 210
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=44.55 E-value=4e+02 Score=31.98 Aligned_cols=29 Identities=10% Similarity=-0.070 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHHHHHhhhccceEEEEEEe
Q 004437 553 LDEPCWQLMLSRHLEMSSKGLRCLGMAYK 581 (753)
Q Consensus 553 l~~~~~~~~~~~~~~~~~~G~rvl~~A~k 581 (753)
+.+..|+...+.++.+.+.|.||..+.-.
T Consensus 439 l~Dp~R~~a~~aI~~l~~aGI~v~miTGD 467 (755)
T TIGR01647 439 LFDPPRHDTKETIERARHLGVEVKMVTGD 467 (755)
T ss_pred ccCCChhhHHHHHHHHHHCCCeEEEECCC
Confidence 44555777888899999999999887643
No 211
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=43.46 E-value=50 Score=29.45 Aligned_cols=81 Identities=17% Similarity=0.289 Sum_probs=55.0
Q ss_pred HhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC-eE-
Q 004437 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI-EV- 644 (753)
Q Consensus 567 ~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi-~v- 644 (753)
-+...|+.|+-++......++.+ ...+.+-.++|+-++--.--+..++.++.|+++|+ .+
T Consensus 22 ~L~~~GfeVidLG~~v~~e~~v~------------------aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~ 83 (128)
T cd02072 22 AFTEAGFNVVNLGVLSPQEEFID------------------AAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDIL 83 (128)
T ss_pred HHHHCCCEEEECCCCCCHHHHHH------------------HHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCe
Confidence 45679999998887653332221 12234556889888888888999999999999998 55
Q ss_pred EEEcCCCh------HHHHHHHHHcCCC
Q 004437 645 MVITGDNK------STAEAICRQIKLF 665 (753)
Q Consensus 645 ~i~TGd~~------~~a~~ia~~~gi~ 665 (753)
+++-|-.. .....-.+++|+.
T Consensus 84 vivGG~~~i~~~d~~~~~~~L~~~Gv~ 110 (128)
T cd02072 84 LYVGGNLVVGKQDFEDVEKRFKEMGFD 110 (128)
T ss_pred EEEECCCCCChhhhHHHHHHHHHcCCC
Confidence 44444421 2234568888883
No 212
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=41.79 E-value=1.6e+02 Score=30.05 Aligned_cols=40 Identities=20% Similarity=0.450 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCcccH---HHhhhcCc-eEecC
Q 004437 707 RHKQEIVRMLKEMGEVVAMTGDGVNDA---PALKLADI-GVAMG 746 (753)
Q Consensus 707 ~~K~~~v~~l~~~~~~v~~~GDg~ND~---~~l~~A~v-giamg 746 (753)
++-..+++.+++.-..-.++|=|+|+. ..+..++. |+.+|
T Consensus 188 ~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVG 231 (263)
T CHL00200 188 KKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNINGIVIG 231 (263)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCCEEEEC
Confidence 444677777777655567789999944 44444433 67777
No 213
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=39.91 E-value=36 Score=29.78 Aligned_cols=39 Identities=18% Similarity=0.363 Sum_probs=30.1
Q ss_pred CCchhHHHHHHHHhCCCe-EEEEcCCChHHHHHHHHHcCC
Q 004437 626 PRGGVDKAIDDCRGAGIE-VMVITGDNKSTAEAICRQIKL 664 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~-v~i~TGd~~~~a~~ia~~~gi 664 (753)
..+.+.+.++++.+.|++ +|+.+|.....+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 567889999999999995 999999888999999999887
No 214
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=37.01 E-value=16 Score=34.92 Aligned_cols=13 Identities=38% Similarity=0.463 Sum_probs=12.3
Q ss_pred EeeCCCcccccCc
Q 004437 363 ICSDKTGTLTTNQ 375 (753)
Q Consensus 363 i~~DKTGTLT~~~ 375 (753)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999998
No 215
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=36.32 E-value=53 Score=29.54 Aligned_cols=82 Identities=15% Similarity=0.111 Sum_probs=56.3
Q ss_pred HHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC-eE
Q 004437 566 LEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI-EV 644 (753)
Q Consensus 566 ~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi-~v 644 (753)
.-|...|+.|+-.......+++.+ ...+.+-.++|+-++...-.+..++.++.|+++|. .+
T Consensus 24 ~~l~~~GfeVi~lg~~~s~e~~v~------------------aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i 85 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQTPEEIAR------------------QAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDI 85 (132)
T ss_pred HHHHhCCcEEEECCCCCCHHHHHH------------------HHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCC
Confidence 346778999987775432222211 12245667899999999999999999999999986 44
Q ss_pred -EEEcCCChHHHHHHHHHcCCC
Q 004437 645 -MVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 645 -~i~TGd~~~~a~~ia~~~gi~ 665 (753)
+++-|-.+..-..-.+++|++
T Consensus 86 ~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 86 LVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred EEEEeCCCChHhHHHHHHCCCC
Confidence 445444554445668889984
No 216
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=35.95 E-value=58 Score=30.21 Aligned_cols=42 Identities=19% Similarity=0.122 Sum_probs=37.4
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.=.+||++.+.+++|.+. +++++.|.-....|..+.+.++..
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 334899999999999955 999999999999999999999874
No 217
>PF15584 Imm44: Immunity protein 44
Probab=35.84 E-value=17 Score=29.86 Aligned_cols=19 Identities=21% Similarity=0.314 Sum_probs=15.6
Q ss_pred CCcEEEecCCCcccccEEE
Q 004437 153 PGDIVELGVGDKVPADMRV 171 (753)
Q Consensus 153 ~GDII~l~~G~~iPaD~~v 171 (753)
+.+-..|+.|++||||||-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4556778999999999976
No 218
>PLN02151 trehalose-phosphatase
Probab=35.78 E-value=67 Score=34.20 Aligned_cols=35 Identities=3% Similarity=0.147 Sum_probs=29.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~ 661 (753)
+.+++.++|++|. .+..|+++|||+......+..-
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~ 155 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKL 155 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCC
Confidence 6789999999999 4579999999999988776643
No 219
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=35.27 E-value=2.4e+02 Score=27.71 Aligned_cols=22 Identities=18% Similarity=0.312 Sum_probs=16.7
Q ss_pred CCCcEEEecCCCcccccEEEEE
Q 004437 152 VPGDIVELGVGDKVPADMRVAA 173 (753)
Q Consensus 152 v~GDII~l~~G~~iPaD~~vl~ 173 (753)
.-|....+...|.+|-|.+.+.
T Consensus 40 r~~~~~~i~~~~L~~GDiI~l~ 61 (230)
T PF00122_consen 40 RDGRWQKIPSSELVPGDIIILK 61 (230)
T ss_dssp ETTEEEEEEGGGT-TTSEEEEE
T ss_pred eccccccchHhhccceeeeecc
Confidence 3478888888888888888775
No 220
>PRK04980 hypothetical protein; Provisional
Probab=34.58 E-value=57 Score=27.73 Aligned_cols=58 Identities=21% Similarity=0.355 Sum_probs=37.8
Q ss_pred ccccEEEeCCeeeeeecCCCCCCCcEEEec--CCCcccccEEEEEeeCCcEEEE-----cccccCCCCccccC
Q 004437 131 CESGKVLRDGYLVPDLPAIGLVPGDIVELG--VGDKVPADMRVAALKTSSLRVE-----QSSLTGEAMPILKG 196 (753)
Q Consensus 131 ~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~--~G~~iPaD~~vl~~~s~~~~Vd-----es~ltGEs~pv~K~ 196 (753)
.++..-+|++.+ +..+|||++.|. .+...-|+..|++. ....+| .+...|+|.+..|.
T Consensus 18 GkKTiTiRd~se------~~~~~G~~~~V~~~e~g~~~c~ieI~sV--~~i~f~eLte~hA~qEg~sL~elk~ 82 (102)
T PRK04980 18 GRKTITIRDESE------SHFKPGDVLRVGTFEDDRYFCTIEVLSV--SPVTFDELNEKHAEQENMTLPELKQ 82 (102)
T ss_pred CCceEEeeCCcc------cCCCCCCEEEEEECCCCcEEEEEEEEEE--EEEehhhCCHHHHHHhCCCHHHHHH
Confidence 345566777543 578999999997 88899999999865 222222 23445665554443
No 221
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=34.33 E-value=1.1e+02 Score=30.63 Aligned_cols=91 Identities=14% Similarity=0.038 Sum_probs=52.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+-++..+++++||++|..+.++|-=... .+.+-..+|+... .+-.+.++ ...-..
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~---fD~vv~S~---------------------e~g~~K 168 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAY---FDFVVESC---------------------EVGLEK 168 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHh---hhhhhhhh---------------------hhccCC
Confidence 3456669999999999777777754332 2356666666310 00001111 111112
Q ss_pred chh--HHHHHHHHHHcCCeEEEEcC-CcccHHHhhhcCc
Q 004437 706 PRH--KQEIVRMLKEMGEVVAMTGD-GVNDAPALKLADI 741 (753)
Q Consensus 706 p~~--K~~~v~~l~~~~~~v~~~GD-g~ND~~~l~~A~v 741 (753)
|+- =...++.+.-....++.+|| ..||...=+.+|.
T Consensus 169 PDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~ 207 (237)
T KOG3085|consen 169 PDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGW 207 (237)
T ss_pred CChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCC
Confidence 322 23445555555778999999 5699988777764
No 222
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=34.32 E-value=57 Score=33.60 Aligned_cols=31 Identities=16% Similarity=0.007 Sum_probs=23.4
Q ss_pred HHHHHHHHcCCeEEEEcCC-cccHHHhhhcCc
Q 004437 711 EIVRMLKEMGEVVAMTGDG-VNDAPALKLADI 741 (753)
Q Consensus 711 ~~v~~l~~~~~~v~~~GDg-~ND~~~l~~A~v 741 (753)
.+++.+.-..+.++||||. ..|+.+=+.|++
T Consensus 210 ~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi 241 (279)
T TIGR01452 210 CITENFSIDPARTLMVGDRLETDILFGHRCGM 241 (279)
T ss_pred HHHHHhCCChhhEEEECCChHHHHHHHHHcCC
Confidence 3444444345789999999 599999999986
No 223
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=33.97 E-value=71 Score=29.86 Aligned_cols=109 Identities=21% Similarity=0.312 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHhhhccceEEEEEEeccc--cccccccccCccc-ccccCC-----CcccccCCCCeEEEEEccccCCCCc
Q 004437 557 CWQLMLSRHLEMSSKGLRCLGMAYKDEL--GEFSDYYSESHPA-HKKLLD-----PSCYSTIESDLVFVGVVGLRDPPRG 628 (753)
Q Consensus 557 ~~~~~~~~~~~~~~~G~rvl~~A~k~~~--~~~~~~~~~~~~~-~~~~~~-----~~~~~~~e~~l~~lG~i~~~d~~r~ 628 (753)
.++.+.+...++...|.+....+++... ..|.+|....... ...... ...+-....|..++|+|.++-.+.+
T Consensus 13 ~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~~~~~~~~~~~~~g~V~~~~y~~v~~d~~ivG~i~lRh~Ln~ 92 (174)
T COG3981 13 DKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLEDLTRQEPGNNLPEGWVPASTYWAVDEDGQIVGFINLRHQLND 92 (174)
T ss_pred hHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHHHhccCCCcCCCCCceeceeEEEEecCCcEEEEEEeeeecch
Confidence 3566777778888888888887777633 5566655431111 111111 0112222337789999999877654
Q ss_pred hh-------------------------HHHHHHHHhCCCeEEEEcCCChH--HHHHHHHHcCCC
Q 004437 629 GV-------------------------DKAIDDCRGAGIEVMVITGDNKS--TAEAICRQIKLF 665 (753)
Q Consensus 629 ~~-------------------------~~~i~~l~~~gi~v~i~TGd~~~--~a~~ia~~~gi~ 665 (753)
.. +.++++++..||+-+++|-|... +.+.|-..-|+.
T Consensus 93 ~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NGGil 156 (174)
T COG3981 93 FLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEANGGIL 156 (174)
T ss_pred HHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhcCCEE
Confidence 43 45889999999999998877544 444455544543
No 224
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=33.10 E-value=78 Score=27.64 Aligned_cols=37 Identities=16% Similarity=0.277 Sum_probs=28.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi 664 (753)
-.+++.++++.+++.|++++.+|++.. ....+.+-|+
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 557899999999999999999998764 3345655553
No 225
>PRK15108 biotin synthase; Provisional
Probab=31.57 E-value=4.9e+02 Score=27.71 Aligned_cols=86 Identities=13% Similarity=0.225 Sum_probs=48.0
Q ss_pred chhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCch
Q 004437 628 GGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPR 707 (753)
Q Consensus 628 ~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 707 (753)
+...++++.+++.|+.+++.-|.-......-.++.|++.-...+.. ...-+ ..+...-+.+
T Consensus 111 e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~~leT---~p~~f----------------~~I~~~~~~~ 171 (345)
T PRK15108 111 PYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNHNLDT---SPEFY----------------GNIITTRTYQ 171 (345)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEeecccc---ChHhc----------------CCCCCCCCHH
Confidence 5677888888888888776666555555566677777531111100 00000 1122233556
Q ss_pred hHHHHHHHHHHcCCeEE---EEcCCccc
Q 004437 708 HKQEIVRMLKEMGEVVA---MTGDGVND 732 (753)
Q Consensus 708 ~K~~~v~~l~~~~~~v~---~~GDg~ND 732 (753)
++.+.++..++.|..+. ++|=|..+
T Consensus 172 ~rl~~i~~a~~~G~~v~sg~i~GlgEt~ 199 (345)
T PRK15108 172 ERLDTLEKVRDAGIKVCSGGIVGLGETV 199 (345)
T ss_pred HHHHHHHHHHHcCCceeeEEEEeCCCCH
Confidence 66777777777665543 56666554
No 226
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=31.17 E-value=8.9e+02 Score=29.59 Aligned_cols=29 Identities=7% Similarity=0.001 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHHhhhccceEEEEEEe
Q 004437 553 LDEPCWQLMLSRHLEMSSKGLRCLGMAYK 581 (753)
Q Consensus 553 l~~~~~~~~~~~~~~~~~~G~rvl~~A~k 581 (753)
+.+..|+...+.++++.+.|.||..+.-.
T Consensus 512 l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD 540 (867)
T TIGR01524 512 FLDPPKESTKEAIAALFKNGINVKVLTGD 540 (867)
T ss_pred eeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence 44555777888999999999999888753
No 227
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=31.12 E-value=55 Score=28.54 Aligned_cols=55 Identities=18% Similarity=0.285 Sum_probs=41.8
Q ss_pred CCCeEEEEEccccCCCCchhHHHHHHHHhCCC-e-EEEEcCCChHHHHHHHHHcCCC
Q 004437 611 ESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI-E-VMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 611 e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi-~-v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
+.+-.++|+-...++--+.+++.++.+++.+- . .+++-|.........+++.|.+
T Consensus 48 ~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~~~G~D 104 (119)
T cd02067 48 EEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLKEIGVD 104 (119)
T ss_pred HcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHHHcCCe
Confidence 34556788888878888999999999999976 4 4677776655545678888874
No 228
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=30.37 E-value=9.7e+02 Score=28.28 Aligned_cols=87 Identities=17% Similarity=0.255 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCc-hhH
Q 004437 553 LDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRG-GVD 631 (753)
Q Consensus 553 l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~-~~~ 631 (753)
+.+..|....+.++++.+.|.||..+.-..... ...+.+. +|+--+.-...| +=.
T Consensus 442 l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~T---------------------A~aIA~e---lGId~v~A~~~PedK~ 497 (679)
T PRK01122 442 LKDIVKPGIKERFAELRKMGIKTVMITGDNPLT---------------------AAAIAAE---AGVDDFLAEATPEDKL 497 (679)
T ss_pred EeccCchhHHHHHHHHHHCCCeEEEECCCCHHH---------------------HHHHHHH---cCCcEEEccCCHHHHH
Confidence 444556778888999999999998776422000 0000000 111112223344 445
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHH-cCC
Q 004437 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQ-IKL 664 (753)
Q Consensus 632 ~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~-~gi 664 (753)
+.|+++|+.|. ++..|||-.+.|-++++. +|+
T Consensus 498 ~iV~~lQ~~G~-~VaMtGDGvNDAPALa~ADVGI 530 (679)
T PRK01122 498 ALIRQEQAEGR-LVAMTGDGTNDAPALAQADVGV 530 (679)
T ss_pred HHHHHHHHcCC-eEEEECCCcchHHHHHhCCEeE
Confidence 66888888885 677799998888777553 444
No 229
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=30.20 E-value=2.2e+02 Score=25.21 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=29.1
Q ss_pred eEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcc--cHHHhhhcCceEecC
Q 004437 699 KVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN--DAPALKLADIGVAMG 746 (753)
Q Consensus 699 ~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~N--D~~~l~~A~vgiamg 746 (753)
.++++..+.--..+++.+ ..-+-+...|-|.| |.++++.-+|-|+=.
T Consensus 41 ~ii~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 41 AIIVGSGTPLTAEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EEEESTTSTBSHHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEEEcCCCCcCHHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 455555442334556666 33466888888888 788888888877543
No 230
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=29.74 E-value=1e+03 Score=29.59 Aligned_cols=65 Identities=14% Similarity=0.074 Sum_probs=41.8
Q ss_pred hhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhc-----ccccEE-----EeCCeeeeeecCCCCCCCcEEEecCC
Q 004437 97 EPLVIVLILVLNAIVGVWQESNAEKALEALKKIQ-----CESGKV-----LRDGYLVPDLPAIGLVPGDIVELGVG 162 (753)
Q Consensus 97 ~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~-----~~~~~V-----~R~g~~~~~i~~~~Lv~GDII~l~~G 162 (753)
..++++++..+-.++..+...++-+.+.++.... ..+... +.-|..+ .+...+.+|.|.+.++..
T Consensus 109 ~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv-~l~~Gd~IPaD~~il~~~ 183 (997)
T TIGR01106 109 VLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLV-EVKGGDRIPADLRIISAQ 183 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEE-EECCCCEEeeeEEEEEcc
Confidence 3555555566556677888888877777763221 111111 2346665 499999999999998865
No 231
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=29.73 E-value=61 Score=24.09 Aligned_cols=25 Identities=16% Similarity=0.157 Sum_probs=18.4
Q ss_pred chhHHHHHHHHhCCCeEEEEcCCCh
Q 004437 628 GGVDKAIDDCRGAGIEVMVITGDNK 652 (753)
Q Consensus 628 ~~~~~~i~~l~~~gi~v~i~TGd~~ 652 (753)
++-+++++.|.++|++|-|.|-+..
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~eF 26 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSEF 26 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHHH
Confidence 5678999999999999999986543
No 232
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=29.38 E-value=1.2e+03 Score=29.18 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=34.1
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhh--cc--c----ccEEEeCCeeeeeecCCCCCCCcEEEecCC
Q 004437 96 VEPLVIVLILVLNAIVGVWQESNAEKALEALKKI--QC--E----SGKVLRDGYLVPDLPAIGLVPGDIVELGVG 162 (753)
Q Consensus 96 ~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~--~~--~----~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G 162 (753)
...++++++..+..+++.+.++++++....-.-. .. . ...-++-|..+ .+...|.+|-|++.+...
T Consensus 55 ~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv-~l~~g~~iPaD~~ll~ss 128 (1057)
T TIGR01652 55 VPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIV-KVKKDERIPADLLLLSSS 128 (1057)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEE-EEcCCCcccceEEEEecc
Confidence 3455555566666667776666666555433211 10 0 11112344443 366667777777766643
No 233
>PRK00087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed
Probab=28.65 E-value=2.8e+02 Score=32.57 Aligned_cols=153 Identities=13% Similarity=0.101 Sum_probs=83.0
Q ss_pred HHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHH
Q 004437 559 QLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCR 638 (753)
Q Consensus 559 ~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~ 638 (753)
.+....+.+++++||.++.++.+. .++.......................+..+ .-++++.-.-...++..+.++.|+
T Consensus 100 ~k~~~~~~~~~~~g~~ivi~G~~~-HpEv~g~~g~~~~~~~vv~~~~~~~~~~~~-~~~~~~~QTT~~~~~~~~~~~~l~ 177 (647)
T PRK00087 100 KNIQKLAKKYYEEGYQIVIVGDKN-HPEVIGINGWCNNSAIIVEDGEEAEKLPFD-KKICVVSQTTEKQENFEKVLKELK 177 (647)
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCC-CCeeeeeccccCCCEEEECCHHHHhhCCCC-CCEEEEEcCCCcHHHHHHHHHHHH
Confidence 567778899999999999999765 111111000000000000000011111111 236666666666777777777777
Q ss_pred hCCCe------EEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHH
Q 004437 639 GAGIE------VMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEI 712 (753)
Q Consensus 639 ~~gi~------v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 712 (753)
+..-. ++-+|-+....++.+|+++.+ ..|...-....-.++
T Consensus 178 ~~~~~~~~~~tiC~at~~Rq~a~~~la~~~d~---------------------------------~~vvGg~~SsNt~~L 224 (647)
T PRK00087 178 KKGKEVKVFNTICNATEVRQEAAEKLAKKVDV---------------------------------MIVVGGKNSSNTTKL 224 (647)
T ss_pred HhCCCcccCCCcchhhhhHHHHHHHHHhhCCE---------------------------------EEEECCCCCccHHHH
Confidence 65432 344555556666666666554 234444444455667
Q ss_pred HHHHHHcCCeEEEEcCCc-ccHHHhhhcC-ceEecC
Q 004437 713 VRMLKEMGEVVAMTGDGV-NDAPALKLAD-IGVAMG 746 (753)
Q Consensus 713 v~~l~~~~~~v~~~GDg~-ND~~~l~~A~-vgiamg 746 (753)
.+..++.|..+..+-+-. =|..+|+.++ |||.=|
T Consensus 225 ~~i~~~~~~~~~~ie~~~el~~~~~~~~~~vgitag 260 (647)
T PRK00087 225 YEICKSNCTNTIHIENAGELPEEWFKGVKIIGVTAG 260 (647)
T ss_pred HHHHHHHCCCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 777777776666665432 2445677554 788777
No 234
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=28.44 E-value=1.2e+02 Score=24.64 Aligned_cols=47 Identities=17% Similarity=0.154 Sum_probs=36.4
Q ss_pred EccccCCCCchhHHHHHHHHhCCCeEEE-EcCCChHHHHHHHHHcCCC
Q 004437 619 VVGLRDPPRGGVDKAIDDCRGAGIEVMV-ITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 619 ~i~~~d~~r~~~~~~i~~l~~~gi~v~i-~TGd~~~~a~~ia~~~gi~ 665 (753)
++.+.+...+.+.+..+.|++.|+++.+ ..+++.......|...|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445567788899999999999999988 4666666666778888874
No 235
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=27.87 E-value=2.9e+02 Score=29.06 Aligned_cols=84 Identities=24% Similarity=0.478 Sum_probs=63.0
Q ss_pred EccccCCCCchhHHHHHHHHhC-CCeEEEEcCCC--hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHh
Q 004437 619 VVGLRDPPRGGVDKAIDDCRGA-GIEVMVITGDN--KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 619 ~i~~~d~~r~~~~~~i~~l~~~-gi~v~i~TGd~--~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (753)
+.+++|+-|-+...++.++-++ |+.+.+--..- ...++.+++.+||++- .....
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl-----------------------~~anE 275 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPL-----------------------ELANE 275 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCHH-----------------------HhhcC
Confidence 6679999999999999887666 67666665554 3678899999999751 11222
Q ss_pred cCCeEEEeeCchhHHHHHHHHHHcC-CeEEEEc
Q 004437 696 HGGKVFSRAEPRHKQEIVRMLKEMG-EVVAMTG 727 (753)
Q Consensus 696 ~~~~v~~~~~p~~K~~~v~~l~~~~-~~v~~~G 727 (753)
-.+.+-+.|++-.++++.|++.+ .....+|
T Consensus 276 --G~lv~~V~~~~a~~~l~~L~~~~~~~A~iIG 306 (339)
T COG0309 276 --GKLVIAVPPEHAEEVLEALRSHGLKDAAIIG 306 (339)
T ss_pred --ceEEEEECHHHHHHHHHHHHhcCCccceeEE
Confidence 46777888888889999999888 4555555
No 236
>PRK11507 ribosome-associated protein; Provisional
Probab=27.46 E-value=80 Score=24.80 Aligned_cols=26 Identities=23% Similarity=0.281 Sum_probs=20.7
Q ss_pred EEEeCCeeeeeecCCCCCCCcEEEecC
Q 004437 135 KVLRDGYLVPDLPAIGLVPGDIVELGV 161 (753)
Q Consensus 135 ~V~R~g~~~~~i~~~~Lv~GDII~l~~ 161 (753)
.|..||+. +.---..|.+||+|.+..
T Consensus 38 ~V~VNGev-e~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAV-ETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEE-ecccCCCCCCCCEEEECC
Confidence 57788887 457778999999998854
No 237
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=27.37 E-value=4.4e+02 Score=25.37 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=22.9
Q ss_pred hhHHHHHHHHhCCCeEEEEc-------CC------ChHHHHHHHHHcCCC
Q 004437 629 GVDKAIDDCRGAGIEVMVIT-------GD------NKSTAEAICRQIKLF 665 (753)
Q Consensus 629 ~~~~~i~~l~~~gi~v~i~T-------Gd------~~~~a~~ia~~~gi~ 665 (753)
|..-++..+++.|++|.-++ ++ +...++.+|+.+|+.
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgip 60 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIP 60 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCc
Confidence 34456666666777654443 11 456677888888874
No 238
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=27.26 E-value=50 Score=31.74 Aligned_cols=29 Identities=31% Similarity=0.535 Sum_probs=23.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKS 653 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~ 653 (753)
++-+++.+++++|.+.|..++++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 35689999999999999988888888654
No 239
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=26.48 E-value=4.3e+02 Score=26.52 Aligned_cols=35 Identities=9% Similarity=0.196 Sum_probs=23.1
Q ss_pred chhHHHHHHHHhCCCeEEEEcCC--ChHHHHHHHHHc
Q 004437 628 GGVDKAIDDCRGAGIEVMVITGD--NKSTAEAICRQI 662 (753)
Q Consensus 628 ~~~~~~i~~l~~~gi~v~i~TGd--~~~~a~~ia~~~ 662 (753)
++..+.++.+++.|+++.++-.- +.+....+++..
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~ 152 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLS 152 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhC
Confidence 56778888889999875555443 344555666654
No 240
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=26.47 E-value=98 Score=31.82 Aligned_cols=48 Identities=19% Similarity=0.362 Sum_probs=39.9
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHcCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI---CRQIKLF 665 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~i---a~~~gi~ 665 (753)
|++...+.+-|++.++++.|+++|-++.++|-.+..+-+.. ++.+|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 77788899999999999999999999999998887666554 4456765
No 241
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=26.33 E-value=69 Score=28.09 Aligned_cols=29 Identities=21% Similarity=0.146 Sum_probs=24.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHH
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKST 654 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~ 654 (753)
-.+++.++++.+++.|.+++.+|+.....
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s~ 86 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGST 86 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCCh
Confidence 44679999999999999999999986543
No 242
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=26.29 E-value=68 Score=35.45 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=28.0
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHc
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQI 662 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~ 662 (753)
.++.+..+++|+++|.++.++|.-+..-+..+..-+
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl 220 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYL 220 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhc
Confidence 368999999999999999999999988877776554
No 243
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=26.09 E-value=4.3e+02 Score=26.02 Aligned_cols=37 Identities=19% Similarity=0.144 Sum_probs=25.1
Q ss_pred hhHHHHHHHHhCCCeEE-EEc------------CCChHHHHHHHHHcCCC
Q 004437 629 GVDKAIDDCRGAGIEVM-VIT------------GDNKSTAEAICRQIKLF 665 (753)
Q Consensus 629 ~~~~~i~~l~~~gi~v~-i~T------------Gd~~~~a~~ia~~~gi~ 665 (753)
|..-++..+++.|+.|+ ++| +.....++.+|+.+|+.
T Consensus 9 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip 58 (218)
T TIGR03679 9 DSNYALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIP 58 (218)
T ss_pred HHHHHHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCC
Confidence 34456677777888773 444 33456778889999984
No 244
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=26.01 E-value=1.8e+02 Score=28.73 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=28.0
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHH
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI 658 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~i 658 (753)
+-||+.+-++.|+..|+.+.++|+.+..++..-
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k 125 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELK 125 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHH
Confidence 345999999999999999999999977666543
No 245
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=25.88 E-value=76 Score=29.54 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=27.6
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia 659 (753)
.+.+.++++.+++.|++|+-+||++--....++
T Consensus 122 S~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 122 SKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 468899999999999999999999876544444
No 246
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=25.66 E-value=53 Score=28.90 Aligned_cols=32 Identities=19% Similarity=0.287 Sum_probs=26.6
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHH
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEA 657 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ 657 (753)
-.+++.++++.+++.|++|+.+|+.+......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~ 90 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAK 90 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhh
Confidence 55789999999999999999999987654333
No 247
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=25.66 E-value=1.3e+03 Score=28.31 Aligned_cols=29 Identities=7% Similarity=0.022 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHHHhhhccceEEEEEEe
Q 004437 553 LDEPCWQLMLSRHLEMSSKGLRCLGMAYK 581 (753)
Q Consensus 553 l~~~~~~~~~~~~~~~~~~G~rvl~~A~k 581 (753)
+.+..|+...+.++.+.+.|.||..+.-.
T Consensus 547 ~~Dp~R~~a~~aI~~l~~aGI~v~miTGD 575 (902)
T PRK10517 547 FLDPPKETTAPALKALKASGVTVKILTGD 575 (902)
T ss_pred hhCcchhhHHHHHHHHHHCCCEEEEEcCC
Confidence 34455778888999999999999888743
No 248
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=25.57 E-value=41 Score=25.98 Aligned_cols=24 Identities=33% Similarity=0.499 Sum_probs=12.4
Q ss_pred EEEeCCeeeeeecCCCCCCCcEEEe
Q 004437 135 KVLRDGYLVPDLPAIGLVPGDIVEL 159 (753)
Q Consensus 135 ~V~R~g~~~~~i~~~~Lv~GDII~l 159 (753)
.|..||+. +.-.-..|.+||+|.+
T Consensus 34 ~V~VNGe~-e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEV-ETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB-----SS----SSEEEEE
T ss_pred ceEECCEE-ccccCCcCCCCCEEEE
Confidence 35567766 3466778899999999
No 249
>PF11431 Transport_MerF: Membrane transport protein MerF; InterPro: IPR021091 This entry represents Mercury ion transport protein MerF, which has a core helix-loop-helix domain. It also has two vicinal pairs of cysteine residues which are involved in the transport of Hg(II) across the membrane and are exposed to the cytoplasm []. ; PDB: 1WAZ_A 2LJ2_A 2H3O_A.
Probab=25.11 E-value=2.6e+02 Score=19.89 Aligned_cols=20 Identities=25% Similarity=0.418 Sum_probs=11.5
Q ss_pred hHHHHHHHHHHHHHHHhhcc
Q 004437 64 TLVKILLVAAFISFILAYFH 83 (753)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~ 83 (753)
|...+++...-++...+|++
T Consensus 2 PiLviL~g~vGLsa~vgyLD 21 (46)
T PF11431_consen 2 PILVILFGAVGLSALVGYLD 21 (46)
T ss_dssp HHHHHHHHHHHHHHHHSHTT
T ss_pred ceehHHHHHhHHHHHHHHHH
Confidence 34445555666666677653
No 250
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.42 E-value=1.5e+02 Score=30.54 Aligned_cols=45 Identities=13% Similarity=0.403 Sum_probs=32.8
Q ss_pred ccCCCCchhHHHHHHHHhCCCe---EEEEcCCChHHHH------HHHHHcCCCC
Q 004437 622 LRDPPRGGVDKAIDDCRGAGIE---VMVITGDNKSTAE------AICRQIKLFS 666 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~------~ia~~~gi~~ 666 (753)
+.+.++++.++.++.+++.|++ .++.-||++.+.. ..|+++||..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788888999999888875 4566788876553 3588888854
No 251
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.20 E-value=1.1e+02 Score=31.40 Aligned_cols=45 Identities=18% Similarity=0.284 Sum_probs=33.5
Q ss_pred ccCCCCchhHHHHHHHHhCCCe---EEEEcCCChHHHH------HHHHHcCCCC
Q 004437 622 LRDPPRGGVDKAIDDCRGAGIE---VMVITGDNKSTAE------AICRQIKLFS 666 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~------~ia~~~gi~~ 666 (753)
+...++++.++.++.+++.|++ +++..||++.+.. ..|+++|+..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456778888999999888875 5677888876553 4588888864
No 252
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=24.07 E-value=1.2e+02 Score=31.68 Aligned_cols=146 Identities=23% Similarity=0.213 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhhhccceEEEEEEecccc-c----cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCc--hh
Q 004437 558 WQLMLSRHLEMSSKGLRCLGMAYKDELG-E----FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRG--GV 630 (753)
Q Consensus 558 ~~~~~~~~~~~~~~G~rvl~~A~k~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~--~~ 630 (753)
-+...+++.-+.+.|++=+.++.|.... . |..+... .+.-| =+|+.-=-....- ..
T Consensus 150 veSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~----------------~dyPL-HlGVTEAG~~~~G~IKS 212 (346)
T TIGR00612 150 VQSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAER----------------SDYPL-HLGVTEAGMGVKGIVKS 212 (346)
T ss_pred HHHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhh----------------CCCCc-eeccccCCCCCCchhHH
Confidence 3445566777888899988888886221 1 1110000 00001 1333322222222 23
Q ss_pred HHHHHHHHhCCC----eEEEEcCCChHH---HHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 631 DKAIDDCRGAGI----EVMVITGDNKST---AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 631 ~~~i~~l~~~gi----~v~i~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.-.|-.|...|| +| =+|+|+.+. +..|.+.+|+......+. +. .-+.|
T Consensus 213 aigig~LL~~GIGDTIRV-SLT~dP~~EV~va~~IL~slglr~~g~~ii----SC--------------------PtCGR 267 (346)
T TIGR00612 213 SAGIGILLARGIGDTIRV-SLTDDPTHEVPVAFEILQSLGLRARGVEIV----AC--------------------PSCGR 267 (346)
T ss_pred HHHHHHHHhhCCCCeEEE-ECCCCcHHHHHHHHHHHHHcCCCcCCCeEE----EC--------------------CCCCC
Confidence 345678888886 33 368998654 567899999965433211 00 01112
Q ss_pred eCchhHHHHH----HHHHHc--CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 704 AEPRHKQEIV----RMLKEM--GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 704 ~~p~~K~~~v----~~l~~~--~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.. -+-..++ +.++.. .-.|++.|=-.|=-.--+.||+|||-|
T Consensus 268 ~~-~dl~~~~~~ve~~l~~~~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 268 TG-FDVEKVVRRVQEALFHLKTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred cC-CCHHHHHHHHHHHHhcCCCCCEEEEECceecCCchhhccCeeeecC
Confidence 21 1222222 233332 468999999999999999999999977
No 253
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=23.99 E-value=4e+02 Score=27.71 Aligned_cols=38 Identities=16% Similarity=0.203 Sum_probs=27.1
Q ss_pred HHHhcCCeEEEeeCchhH--HHHHHHHHHcCCeEEEEcCC
Q 004437 692 ALSKHGGKVFSRAEPRHK--QEIVRMLKEMGEVVAMTGDG 729 (753)
Q Consensus 692 ~~~~~~~~v~~~~~p~~K--~~~v~~l~~~~~~v~~~GDg 729 (753)
.+.+.+..+.--..|.-| ...++.+.++|+.+..+||.
T Consensus 83 ~~~~~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~ 122 (298)
T PRK01045 83 EAKERGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHK 122 (298)
T ss_pred HHHHCCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCC
Confidence 334334567777777654 56788888889999999983
No 254
>PLN02591 tryptophan synthase
Probab=23.82 E-value=5.9e+02 Score=25.74 Aligned_cols=97 Identities=22% Similarity=0.282 Sum_probs=52.5
Q ss_pred CCCCchhHHHHHHHHhCCCe-EEEEcCCCh-HHHHHHHHHc-CCCCCCCcccc-ccccchhhhccCHHHHHHHHHhcCCe
Q 004437 624 DPPRGGVDKAIDDCRGAGIE-VMVITGDNK-STAEAICRQI-KLFSGNEDLTG-RSFTGKEFMALSSTQQIEALSKHGGK 699 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~-v~i~TGd~~-~~a~~ia~~~-gi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (753)
|-+-++..+..+.+++.|+. +.++|-... +....+++.. |+.. +.+ .-.+|.
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY----~Vs~~GvTG~-------------------- 169 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY----LVSSTGVTGA-------------------- 169 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE----EeeCCCCcCC--------------------
Confidence 33347777788888888875 444444443 3455565554 2210 000 001110
Q ss_pred EEEeeCchhHHHHHHHHHHcCCeEEEEcCCcc---cHHHhhhc-CceEecC
Q 004437 700 VFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN---DAPALKLA-DIGVAMG 746 (753)
Q Consensus 700 v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~N---D~~~l~~A-~vgiamg 746 (753)
....|.+-...++.+++....-+++|=|.+ |+..+... -=|+-+|
T Consensus 170 --~~~~~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVG 218 (250)
T PLN02591 170 --RASVSGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVG 218 (250)
T ss_pred --CcCCchhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEEC
Confidence 001245556778888877666777899988 56655554 2255556
No 255
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=23.53 E-value=73 Score=29.64 Aligned_cols=24 Identities=21% Similarity=0.487 Sum_probs=20.6
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCC
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGD 650 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd 650 (753)
.+++.++|++|.+.|++++|+|--
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred chhHHHHHHHHHhcCCeEEEEeCc
Confidence 357999999999999999999954
No 256
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=23.44 E-value=2.9e+02 Score=29.79 Aligned_cols=73 Identities=21% Similarity=0.315 Sum_probs=52.5
Q ss_pred hhHHHHHHHHhCCC--eEEEEcCCChHHHH-HHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 629 GVDKAIDDCRGAGI--EVMVITGDNKSTAE-AICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 629 ~~~~~i~~l~~~gi--~v~i~TGd~~~~a~-~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
++..+++++-+.+- .|+-.|+-|...|. .-|+++|+.. ..|.-..+
T Consensus 100 Ga~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~Lgipa-------------------------------TIVmP~~t 148 (457)
T KOG1250|consen 100 GAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPA-------------------------------TIVMPVAT 148 (457)
T ss_pred hHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCce-------------------------------EEEecCCC
Confidence 77888888877763 37777887776655 4589999954 45666777
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHH
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~ 735 (753)
|..|. +.++..|..|...|+..--+.+
T Consensus 149 p~~ki---q~~~nlGA~Vil~G~~~deAk~ 175 (457)
T KOG1250|consen 149 PLMKI---QRCRNLGATVILSGEDWDEAKA 175 (457)
T ss_pred hHHHH---HHHhccCCEEEEecccHHHHHH
Confidence 87664 4566678889999987754443
No 257
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=23.44 E-value=1.4e+03 Score=27.98 Aligned_cols=65 Identities=23% Similarity=0.313 Sum_probs=39.1
Q ss_pred hhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcc----c--------ccEE----EeCCeeeeeecCCCCCCCcEEEec
Q 004437 97 EPLVIVLILVLNAIVGVWQESNAEKALEALKKIQC----E--------SGKV----LRDGYLVPDLPAIGLVPGDIVELG 160 (753)
Q Consensus 97 ~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~----~--------~~~V----~R~g~~~~~i~~~~Lv~GDII~l~ 160 (753)
..++++++..+-.++..+...++.+.++++..... . ...| +.-|..+ .+...+.+|-|.+.++
T Consensus 116 iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV-~l~~Gd~IPaDg~li~ 194 (903)
T PRK15122 116 IILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIV-HLSAGDMIPADVRLIE 194 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEE-EECCCCEEeeeEEEEE
Confidence 34444444545555666777777777777743221 1 1111 2346665 4899999999988887
Q ss_pred CC
Q 004437 161 VG 162 (753)
Q Consensus 161 ~G 162 (753)
..
T Consensus 195 g~ 196 (903)
T PRK15122 195 SR 196 (903)
T ss_pred cC
Confidence 43
No 258
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.42 E-value=1.2e+02 Score=31.29 Aligned_cols=44 Identities=9% Similarity=0.175 Sum_probs=31.9
Q ss_pred cCCCCchhHHHHHHHHhCCCe---EEEEcCCChHHHH------HHHHHcCCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIE---VMVITGDNKSTAE------AICRQIKLFS 666 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~------~ia~~~gi~~ 666 (753)
...++++.++.++.+++.|++ .++..||++.+.. ..|+++||..
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 345778888899999887765 4667788776543 4588888854
No 259
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=23.36 E-value=73 Score=27.91 Aligned_cols=29 Identities=21% Similarity=0.179 Sum_probs=25.6
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHH
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKST 654 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~ 654 (753)
-.+++.++++.+++.|.+++.+|+.....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSP 87 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCc
Confidence 46799999999999999999999987654
No 260
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=23.01 E-value=4e+02 Score=27.43 Aligned_cols=83 Identities=11% Similarity=0.143 Sum_probs=50.9
Q ss_pred hhHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCch
Q 004437 629 GVDKAIDDCRGAG-IEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPR 707 (753)
Q Consensus 629 ~~~~~i~~l~~~g-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 707 (753)
++..+++.+++.. -+.+-++-++.+.+...+ +.|.+ ...+..++|+
T Consensus 175 ~v~~av~~~r~~~~~~~I~VEv~tleea~eA~-~~gaD--------------------------------~I~LD~~~~e 221 (277)
T PRK05742 175 GIAQAVAAAHRIAPGKPVEVEVESLDELRQAL-AAGAD--------------------------------IVMLDELSLD 221 (277)
T ss_pred CHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HcCCC--------------------------------EEEECCCCHH
Confidence 4466677777663 234666777777765533 44542 2334556777
Q ss_pred hHHHHHHHHHHcCCeEEEEcCCcc--cHHHhhhcCc-eEecC
Q 004437 708 HKQEIVRMLKEMGEVVAMTGDGVN--DAPALKLADI-GVAMG 746 (753)
Q Consensus 708 ~K~~~v~~l~~~~~~v~~~GDg~N--D~~~l~~A~v-giamg 746 (753)
+=.++++.++ ..-.+.+.| |+| +++.+..+++ +|++|
T Consensus 222 ~l~~~v~~~~-~~i~leAsG-GIt~~ni~~~a~tGvD~Isvg 261 (277)
T PRK05742 222 DMREAVRLTA-GRAKLEASG-GINESTLRVIAETGVDYISIG 261 (277)
T ss_pred HHHHHHHHhC-CCCcEEEEC-CCCHHHHHHHHHcCCCEEEEC
Confidence 7667776553 234577777 554 5667777775 77777
No 261
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.00 E-value=2.9e+02 Score=27.77 Aligned_cols=42 Identities=14% Similarity=0.255 Sum_probs=34.0
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSG 667 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~ 667 (753)
+|+++.+.+..|++.+|++.+.|.--......+-++.....+
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p 180 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP 180 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc
Confidence 688999999999999999999998877777776666554433
No 262
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=23.00 E-value=46 Score=34.25 Aligned_cols=176 Identities=16% Similarity=0.187 Sum_probs=85.8
Q ss_pred CChHHHHHhcccccccCCceeeCCHHH--HHHHHHHHHHhhhccceEEEEEEec--cccccccccccCcccccccCCCcc
Q 004437 531 GSVESLLERSSHVQLADGSVVPLDEPC--WQLMLSRHLEMSSKGLRCLGMAYKD--ELGEFSDYYSESHPAHKKLLDPSC 606 (753)
Q Consensus 531 Ga~e~il~~c~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~G~rvl~~A~k~--~~~~~~~~~~~~~~~~~~~~~~~~ 606 (753)
|.|..+.+..... |. .-+|..+ -.++...+.++.++||.++.++-+. +..-...|.... ......+...
T Consensus 73 Gv~~~~~~~l~~~----g~-~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~--~~~vv~~~~~ 145 (281)
T PF02401_consen 73 GVPPEVYEELKER----GL-EVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEE--KAIVVESPED 145 (281)
T ss_dssp ---HHHHHHHHHT----TE-EEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS---EEEESSHHH
T ss_pred CCCHHHHHHHHHc----CC-EEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCC--ceEEeCChhh
Confidence 6666666654321 11 1134444 3677888999999999999999764 110011111100 0000000000
Q ss_pred cccCC-CCeEEEEEccccCCCCchhHHHHHHHHhCCCeEE--------EEcCCChHHHHHHHHHcCCCCCCCcccccccc
Q 004437 607 YSTIE-SDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVM--------VITGDNKSTAEAICRQIKLFSGNEDLTGRSFT 677 (753)
Q Consensus 607 ~~~~e-~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~--------i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 677 (753)
...++ .+..-++++.-.-...++..+.++.|++..-.+. -.|-+....+..+|+++.+
T Consensus 146 ~~~l~~~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~------------- 212 (281)
T PF02401_consen 146 VEKLPISDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDA------------- 212 (281)
T ss_dssp HHHGGGSSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSE-------------
T ss_pred hcccCCCCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCE-------------
Confidence 00000 1112356666666667777777777777655444 2333334444445554433
Q ss_pred chhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhc-CceEecC
Q 004437 678 GKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLA-DIGVAMG 746 (753)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A-~vgiamg 746 (753)
..|...-....-.++.+..++.+..+..+.+-. =|..+|+.+ .|||.=|
T Consensus 213 --------------------miVIGg~~SsNT~kL~eia~~~~~~t~~Ie~~~el~~~~l~~~~~VGItaG 263 (281)
T PF02401_consen 213 --------------------MIVIGGKNSSNTRKLAEIAKEHGKPTYHIETADELDPEWLKGVKKVGITAG 263 (281)
T ss_dssp --------------------EEEES-TT-HHHHHHHHHHHHCTTCEEEESSGGG--HHHHTT-SEEEEEE-
T ss_pred --------------------EEEecCCCCccHHHHHHHHHHhCCCEEEeCCccccCHhHhCCCCEEEEEcc
Confidence 234555555667788888888888888886633 234578888 5899877
No 263
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=22.82 E-value=4.6e+02 Score=27.03 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=25.5
Q ss_pred cCCeEEEeeCchhH--HHHHHHHHHcCCeEEEEcCC
Q 004437 696 HGGKVFSRAEPRHK--QEIVRMLKEMGEVVAMTGDG 729 (753)
Q Consensus 696 ~~~~v~~~~~p~~K--~~~v~~l~~~~~~v~~~GDg 729 (753)
.+..++--..|.-| ...++.+.+.|+.+..+||.
T Consensus 87 ~gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~ 122 (280)
T TIGR00216 87 KGLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKK 122 (280)
T ss_pred CCCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 33466767777654 56788888899999999984
No 264
>PRK08433 flagellar motor switch protein; Validated
Probab=22.40 E-value=51 Score=28.55 Aligned_cols=43 Identities=7% Similarity=0.071 Sum_probs=23.0
Q ss_pred HHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccE
Q 004437 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADM 169 (753)
Q Consensus 121 ~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~ 169 (753)
+.+.++..+....+.|. ..+...++.+.|++.+++||+||-|-
T Consensus 21 ~~~~~~~~L~~v~VeV~------v~LG~t~itl~dlL~Lq~GDVI~Ld~ 63 (111)
T PRK08433 21 ELICDYENLLDIEVDFS------AELGTTQISLLEILKFEKGSVIDLEK 63 (111)
T ss_pred HhhhhHHHhccceeEEE------EEEecccccHHHHhCCCCCCEEEeCC
Confidence 44455555444333332 12444555666777777777766663
No 265
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=22.22 E-value=1.3e+02 Score=26.04 Aligned_cols=36 Identities=8% Similarity=0.150 Sum_probs=21.2
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCh--------HHHHHHHHHcCCC
Q 004437 630 VDKAIDDCRGAGIEVMVITGDNK--------STAEAICRQIKLF 665 (753)
Q Consensus 630 ~~~~i~~l~~~gi~v~i~TGd~~--------~~a~~ia~~~gi~ 665 (753)
+.+-++.++++|++.+|.=.-.. ..-...|+++||.
T Consensus 16 ~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~ 59 (110)
T PF04273_consen 16 SPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQ 59 (110)
T ss_dssp -HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-E
T ss_pred CHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCe
Confidence 34667889999999888763221 1234689999984
No 266
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=22.07 E-value=4.7e+02 Score=27.16 Aligned_cols=121 Identities=19% Similarity=0.195 Sum_probs=60.2
Q ss_pred EEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCC----hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHH
Q 004437 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN----KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQI 690 (753)
Q Consensus 615 ~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (753)
.-+|+|--++..|-.+.-.+...+-.|..+.+-.++. .++....|+-+|= .+.+-.+.....+.+.
T Consensus 45 k~laliFeK~STRTR~SFeva~~qlGg~~~~l~~~~~Qlgr~Esi~DTArVLsr----------~~D~I~~R~~~~~~ve 114 (310)
T COG0078 45 KNLALIFEKTSTRTRVSFEVAATQLGGHAIYLGPGDSQLGRGESIKDTARVLSR----------MVDAIMIRGFSHETLE 114 (310)
T ss_pred ceEEEEecCCCchhhhhHHHHHHHcCCCeEEeCCCccccCCCCcHHHHHHHHHh----------hhheEEEecccHHHHH
Confidence 3477777777777777666666665555555555552 2333344444331 1111112222233333
Q ss_pred HHHHhcCCeEEEeeC----chhHHHHHHHHHH-----cCCeEEEEcCCcccHH--HhhhcCceEec
Q 004437 691 EALSKHGGKVFSRAE----PRHKQEIVRMLKE-----MGEVVAMTGDGVNDAP--ALKLADIGVAM 745 (753)
Q Consensus 691 ~~~~~~~~~v~~~~~----p~~K~~~v~~l~~-----~~~~v~~~GDg~ND~~--~l~~A~vgiam 745 (753)
++.......|+-..+ |-|-..=+-.+++ .|.+++++|||.|=+- |+-.|-+|+-+
T Consensus 115 ~lA~~s~VPViNgLtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 115 ELAKYSGVPVINGLTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred HHHHhCCCceEcccccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeE
Confidence 444444444554433 4333222222332 3789999999955332 55555555544
No 267
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=21.98 E-value=1.3e+02 Score=27.15 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=32.4
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcC
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITG 649 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TG 649 (753)
..-++++|+.+.+...+-..-+.|+++|++|+-+--
T Consensus 16 ~K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP 51 (140)
T COG1832 16 AKTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNP 51 (140)
T ss_pred CceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCc
Confidence 345899999999999999999999999999998754
No 268
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=21.81 E-value=5.8e+02 Score=22.80 Aligned_cols=99 Identities=15% Similarity=0.152 Sum_probs=60.5
Q ss_pred EEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCCh-HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHH
Q 004437 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNK-STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 615 ~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
.++|.++- |.=..+..-+-..|+.+|++|+-+-++.. +.....|.+-+-+
T Consensus 5 v~~a~~g~-D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~ad---------------------------- 55 (132)
T TIGR00640 5 ILVAKMGQ-DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVH---------------------------- 55 (132)
T ss_pred EEEEeeCC-CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCC----------------------------
Confidence 45666666 55556666677788999999999888743 4444555544331
Q ss_pred HhcCCeEEEeeC---chhHHHHHHHHHHcCC--eEEEEcC--CcccHHHhhhcCceEecC
Q 004437 694 SKHGGKVFSRAE---PRHKQEIVRMLKEMGE--VVAMTGD--GVNDAPALKLADIGVAMG 746 (753)
Q Consensus 694 ~~~~~~v~~~~~---p~~K~~~v~~l~~~~~--~v~~~GD--g~ND~~~l~~A~vgiamg 746 (753)
..+++... .+.=..+++.|++.|. ...++|- ...|...+++++|-=..+
T Consensus 56 ----ii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd~~~~ 111 (132)
T TIGR00640 56 ----VVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVAEIFG 111 (132)
T ss_pred ----EEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCCEEEC
Confidence 12333322 2334567777877653 4566663 344688888888744444
No 269
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=21.71 E-value=2.2e+02 Score=27.07 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=27.4
Q ss_pred ccCCCCchhHHHHHHHHhCCCeEEEEcCCChH
Q 004437 622 LRDPPRGGVDKAIDDCRGAGIEVMVITGDNKS 653 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~ 653 (753)
+.-++-|++.++|++-+++|++|.+-|..+..
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~ 131 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVK 131 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCch
Confidence 45678899999999999999999998876644
No 270
>PRK04302 triosephosphate isomerase; Provisional
Probab=21.47 E-value=2.9e+02 Score=27.23 Aligned_cols=26 Identities=12% Similarity=0.360 Sum_probs=21.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDN 651 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~ 651 (753)
+.++..+.++.+++.|+.+++++|+.
T Consensus 99 ~~~e~~~~v~~a~~~Gl~~I~~v~~~ 124 (223)
T PRK04302 99 TLADIEAVVERAKKLGLESVVCVNNP 124 (223)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 34567889999999999999999984
No 271
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=21.16 E-value=62 Score=23.87 Aligned_cols=12 Identities=42% Similarity=0.662 Sum_probs=9.9
Q ss_pred CCCcEEEecCCC
Q 004437 152 VPGDIVELGVGD 163 (753)
Q Consensus 152 v~GDII~l~~G~ 163 (753)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 579999998875
No 272
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=21.14 E-value=2.3e+02 Score=30.15 Aligned_cols=60 Identities=20% Similarity=0.326 Sum_probs=43.6
Q ss_pred EEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeE
Q 004437 644 VMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVV 723 (753)
Q Consensus 644 v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v 723 (753)
|.--+|.+......-|+.+|+.. ..+.-..+|.+|..-++. .|..|
T Consensus 78 iaaSaGNHaQGvA~aa~~lGi~a-------------------------------~IvMP~~tp~~Kv~a~r~---~GaeV 123 (347)
T COG1171 78 IAASAGNHAQGVAYAAKRLGIKA-------------------------------TIVMPETTPKIKVDATRG---YGAEV 123 (347)
T ss_pred EEecCCcHHHHHHHHHHHhCCCE-------------------------------EEEecCCCcHHHHHHHHh---cCCEE
Confidence 44445666666777799999964 455667889988776655 56689
Q ss_pred EEEcCCcccHHHhh
Q 004437 724 AMTGDGVNDAPALK 737 (753)
Q Consensus 724 ~~~GDg~ND~~~l~ 737 (753)
...||...|+....
T Consensus 124 il~g~~~dda~~~a 137 (347)
T COG1171 124 ILHGDNFDDAYAAA 137 (347)
T ss_pred EEECCCHHHHHHHH
Confidence 99999998887543
No 273
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=21.06 E-value=5e+02 Score=26.02 Aligned_cols=98 Identities=14% Similarity=0.286 Sum_probs=52.5
Q ss_pred CCCCchhHHHHHHHHhCCCeEEE-EcCCC-hHHHHHHHH-HcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMV-ITGDN-KSTAEAICR-QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i-~TGd~-~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
|-+-++..+.++.+++.|++.++ ++-.. .+....+++ ..|+..-. ...-.+|.+
T Consensus 112 Dl~~ee~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~~~~vy~~---s~~g~tG~~-------------------- 168 (242)
T cd04724 112 DLPPEEAEEFREAAKEYGLDLIFLVAPTTPDERIKKIAELASGFIYYV---SRTGVTGAR-------------------- 168 (242)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCCCEEEE---eCCCCCCCc--------------------
Confidence 33346788899999999987555 44433 344556665 55542100 000000000
Q ss_pred EEeeCchhHHHHHHHHHHcCCeEEEEcCCcc---cHHHhhhcCceEecC
Q 004437 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN---DAPALKLADIGVAMG 746 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~N---D~~~l~~A~vgiamg 746 (753)
...+..-...++.+++....-.++|=|.| |+..+..+-=|+.+|
T Consensus 169 --~~~~~~~~~~i~~lr~~~~~pI~vggGI~~~e~~~~~~~~ADgvVvG 215 (242)
T cd04724 169 --TELPDDLKELIKRIRKYTDLPIAVGFGISTPEQAAEVAKYADGVIVG 215 (242)
T ss_pred --cCCChhHHHHHHHHHhcCCCcEEEEccCCCHHHHHHHHccCCEEEEC
Confidence 00123334566677766556677888998 455555542267667
No 274
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=20.91 E-value=75 Score=30.79 Aligned_cols=79 Identities=10% Similarity=0.137 Sum_probs=54.6
Q ss_pred HhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCe---
Q 004437 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIE--- 643 (753)
Q Consensus 567 ~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~--- 643 (753)
-+...|++|+-++.....+++.+. ..+.+-.++|+-.....-.+..++.++.+++.|.+
T Consensus 107 ~l~~~G~~vi~LG~~vp~e~~v~~------------------~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v 168 (197)
T TIGR02370 107 MLRANGFDVIDLGRDVPIDTVVEK------------------VKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSV 168 (197)
T ss_pred HHHhCCcEEEECCCCCCHHHHHHH------------------HHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCC
Confidence 456789999988754322222111 11344568898889899999999999999999874
Q ss_pred EEEEcCCChHHHHHHHHHcCCC
Q 004437 644 VMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 644 v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.+++-|... + ..+++++|-+
T Consensus 169 ~i~vGG~~~-~-~~~~~~~gad 188 (197)
T TIGR02370 169 KFMVGGAPV-T-QDWADKIGAD 188 (197)
T ss_pred EEEEEChhc-C-HHHHHHhCCc
Confidence 455666554 3 3578888875
No 275
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=20.88 E-value=6e+02 Score=25.71 Aligned_cols=43 Identities=9% Similarity=0.250 Sum_probs=28.8
Q ss_pred cccCCCCchhHHHHHHHHhCCCeEE-EEcCCCh-HHHHHHHHHcC
Q 004437 621 GLRDPPRGGVDKAIDDCRGAGIEVM-VITGDNK-STAEAICRQIK 663 (753)
Q Consensus 621 ~~~d~~r~~~~~~i~~l~~~gi~v~-i~TGd~~-~~a~~ia~~~g 663 (753)
.+.|-+-++..+.++.+++.|+..+ +++-... +....+++...
T Consensus 120 iipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~ 164 (256)
T TIGR00262 120 LVADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQ 164 (256)
T ss_pred EECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCC
Confidence 3445566788889999999998744 6665553 44556666553
No 276
>PRK08568 preprotein translocase subunit SecY; Reviewed
Probab=20.79 E-value=6.8e+02 Score=27.92 Aligned_cols=54 Identities=11% Similarity=0.103 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHhcCCCccCCCCCc----cHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 004437 27 GLSSREVEKRRERYGWNELDKEKGK----PLWQLVLEQFDDTLVKILLVAAFISFILA 80 (753)
Q Consensus 27 GL~~~~~~~r~~~yG~N~i~~~~~~----~~~~~l~~~f~~~~~~~~~~~~~~~~~~~ 80 (753)
|++.+|+.+++++-|.=---..+.+ .+++.....+.-..-+++.+++++..+++
T Consensus 365 g~~p~diAe~Lkk~g~~IpGiRpG~~~t~~yL~~~i~r~t~~Ga~~l~~ia~lp~~~~ 422 (462)
T PRK08568 365 GLDPKTQARQLQNSGMQIPGFRRNPKVIEKVLERYIPPVTVIGGAIVGLLAVLADLLG 422 (462)
T ss_pred CCCHHHHHHHHHHcCCcccCcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999885332222222 24444444444444445555555544443
No 277
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=20.78 E-value=4.6e+02 Score=25.27 Aligned_cols=120 Identities=22% Similarity=0.289 Sum_probs=72.6
Q ss_pred EEEEccccCC-CCchhHHHHHHHHhCCCeEEEEcCCChHHHHH---HHHHcCCCCCCCccccccccchhhhccCHHHHHH
Q 004437 616 FVGVVGLRDP-PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEA---ICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIE 691 (753)
Q Consensus 616 ~lG~i~~~d~-~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~---ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (753)
.+.+++..+| +|-+....|+..+++|..=.++--=+++.|.. -|++-|+.-- .+.. .-..++.++
T Consensus 97 PIiLmgYYNPIl~yG~e~~iq~ak~aGanGfiivDlPpEEa~~~Rne~~k~gislv-------pLva----PsTtdeRme 165 (268)
T KOG4175|consen 97 PIILMGYYNPILRYGVENYIQVAKNAGANGFIIVDLPPEEAETLRNEARKHGISLV-------PLVA----PSTTDERME 165 (268)
T ss_pred ceeeeecccHHHhhhHHHHHHHHHhcCCCceEeccCChHHHHHHHHHHHhcCceEE-------EeeC----CCChHHHHH
Confidence 4566667776 78899999999999999877777777777654 4555555210 0000 001133344
Q ss_pred HHHhc-C--CeEEEeeC--------chhHHHHHHHHHHc-CCeEEEEcCCcccHHHhhhcC---ceEecC
Q 004437 692 ALSKH-G--GKVFSRAE--------PRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLAD---IGVAMG 746 (753)
Q Consensus 692 ~~~~~-~--~~v~~~~~--------p~~K~~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~---vgiamg 746 (753)
++.+. + .-+.+||- .+.-..+++..++. |..-+++|=|.|-.+-+++.+ =||.+|
T Consensus 166 ll~~~adsFiYvVSrmG~TG~~~svn~~l~~L~qrvrk~t~dtPlAVGFGvst~EHf~qVgsvaDGVvvG 235 (268)
T KOG4175|consen 166 LLVEAADSFIYVVSRMGVTGTRESVNEKLQSLLQRVRKATGDTPLAVGFGVSTPEHFKQVGSVADGVVVG 235 (268)
T ss_pred HHHHhhcceEEEEEeccccccHHHHHHHHHHHHHHHHHhcCCCceeEeeccCCHHHHHhhhhhccceEec
Confidence 33321 1 12334431 12234566666665 788899999999999888764 255555
No 278
>PF09953 DUF2187: Uncharacterized protein conserved in bacteria (DUF2187); InterPro: IPR018690 This family consists of various hypothetical bacterial proteins with known function. It includes the uncharacterised YkvS protein from Bacillus subtilis.
Probab=20.46 E-value=2.4e+02 Score=21.17 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=25.6
Q ss_pred CCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccC
Q 004437 152 VPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTG 188 (753)
Q Consensus 152 v~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltG 188 (753)
.+||+|.++.| --|.|.....+++.||=+....
T Consensus 5 ~vGdiIefk~g----~~G~V~kv~eNSVIVdIT~m~~ 37 (57)
T PF09953_consen 5 KVGDIIEFKDG----FTGIVEKVYENSVIVDITIMEN 37 (57)
T ss_pred ccCcEEEEcCC----cEEEEEEEecCcEEEEEEecCC
Confidence 58999999875 5788877677888888766554
No 279
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.37 E-value=5.5e+02 Score=26.78 Aligned_cols=23 Identities=4% Similarity=0.008 Sum_probs=15.9
Q ss_pred CCHHHHHHHHHHHHHhhhccceE
Q 004437 553 LDEPCWQLMLSRHLEMSSKGLRC 575 (753)
Q Consensus 553 l~~~~~~~~~~~~~~~~~~G~rv 575 (753)
+.++.++++.+.++.+..+|.++
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P 34 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEP 34 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC
Confidence 44556777888888887777554
No 280
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=20.18 E-value=1.7e+02 Score=23.99 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=36.3
Q ss_pred EEccccC---CCCchhHHHHHHHHhCCCeEEEEc-CCChHHHHHHHHHcCCC
Q 004437 618 GVVGLRD---PPRGGVDKAIDDCRGAGIEVMVIT-GDNKSTAEAICRQIKLF 665 (753)
Q Consensus 618 G~i~~~d---~~r~~~~~~i~~l~~~gi~v~i~T-Gd~~~~a~~ia~~~gi~ 665 (753)
.++.+.+ ...+-+.+..+.|+++|+++.+-. +++......-|...|+.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4556666 677788899999999999988885 44555566778888874
No 281
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.10 E-value=6e+02 Score=26.25 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=16.6
Q ss_pred CCHHHHHHHHHHHHHhhhccceE
Q 004437 553 LDEPCWQLMLSRHLEMSSKGLRC 575 (753)
Q Consensus 553 l~~~~~~~~~~~~~~~~~~G~rv 575 (753)
+.++.++++.+.++.+..+|.++
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p 33 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQP 33 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC
Confidence 44566778888888887777655
Done!