Query 004439
Match_columns 753
No_of_seqs 179 out of 205
Neff 3.9
Searched_HMMs 29240
Date Tue Mar 26 01:16:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004439.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004439hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ax1_A Serrate RNA effector mo 100.0 4.8E-98 2E-102 793.8 27.6 353 224-580 1-354 (358)
2 2adr_A ADR1; transcription reg 84.8 0.25 8.5E-06 37.4 0.8 41 514-559 17-57 (60)
3 2lv2_A Insulinoma-associated p 84.6 0.51 1.7E-05 40.4 2.7 40 514-558 43-82 (85)
4 1x5w_A Zinc finger protein 64, 83.2 0.52 1.8E-05 36.9 2.1 40 514-558 24-63 (70)
5 1bbo_A Human enhancer-binding 82.3 0.75 2.6E-05 34.2 2.5 40 514-558 16-55 (57)
6 2d9h_A Zinc finger protein 692 80.4 1.4 4.8E-05 35.0 3.7 28 530-559 38-65 (78)
7 2gqj_A Zinc finger protein KIA 79.9 0.83 2.8E-05 38.6 2.3 27 530-558 54-80 (98)
8 3uk3_C Zinc finger protein 217 79.5 1.6 5.6E-05 32.3 3.6 38 514-556 19-56 (57)
9 2yt9_A Zinc finger-containing 78.0 1.9 6.5E-05 35.1 3.9 41 515-558 51-91 (95)
10 1klr_A Zinc finger Y-chromosom 77.2 1.3 4.4E-05 28.0 2.1 26 531-558 3-28 (30)
11 1znf_A 31ST zinc finger from X 76.6 1.6 5.4E-05 27.2 2.4 23 531-555 2-24 (27)
12 1x6e_A Zinc finger protein 24; 76.4 1.5 5.2E-05 34.5 2.7 38 514-556 29-66 (72)
13 1paa_A Yeast transcription fac 76.3 1.6 5.5E-05 27.8 2.4 26 530-557 2-27 (30)
14 2dlq_A GLI-kruppel family memb 75.6 2 6.7E-05 36.5 3.4 40 514-558 81-120 (124)
15 1zfd_A SWI5; DNA binding motif 74.8 1.7 5.7E-05 28.4 2.2 26 530-555 3-28 (32)
16 2ct1_A Transcriptional repress 74.6 2.5 8.5E-05 33.6 3.6 27 530-558 45-71 (77)
17 1sp2_A SP1F2; zinc finger, tra 74.2 1.6 5.4E-05 28.5 1.9 27 530-556 2-28 (31)
18 2lce_A B-cell lymphoma 6 prote 73.7 1.9 6.5E-05 34.0 2.7 39 515-558 33-71 (74)
19 2elx_A Zinc finger protein 406 73.0 1.5 5.2E-05 29.1 1.7 27 530-558 7-33 (35)
20 1bhi_A CRE-BP1, ATF-2; CRE bin 72.7 1.4 4.9E-05 30.1 1.5 25 530-554 6-30 (38)
21 2drp_A Protein (tramtrack DNA- 72.6 2.8 9.4E-05 32.1 3.3 26 530-557 40-65 (66)
22 3mjh_B Early endosome antigen 72.6 1.5 5.3E-05 32.7 1.7 26 531-558 6-31 (34)
23 1va1_A Transcription factor SP 71.0 1.5 5.1E-05 30.2 1.3 25 530-554 8-32 (37)
24 3iuf_A Zinc finger protein UBI 70.9 1.9 6.7E-05 31.8 2.0 27 530-558 7-33 (48)
25 2dlk_A Novel protein; ZF-C2H2 70.9 2.9 0.0001 32.9 3.2 39 514-555 24-63 (79)
26 1ard_A Yeast transcription fac 70.9 2 6.8E-05 27.0 1.8 25 530-556 2-26 (29)
27 2dmd_A Zinc finger protein 64, 70.6 2.4 8.2E-05 34.6 2.7 39 515-558 52-90 (96)
28 1p7a_A BF3, BKLF, kruppel-like 69.8 2.7 9.2E-05 28.3 2.4 24 530-555 11-34 (37)
29 2epa_A Krueppel-like factor 10 69.1 3 0.0001 32.6 2.8 36 515-553 35-70 (72)
30 2elo_A Zinc finger protein 406 69.0 1.7 5.7E-05 29.4 1.2 27 530-558 9-35 (37)
31 2ctd_A Zinc finger protein 512 68.5 2.8 9.7E-05 35.8 2.8 39 514-558 50-88 (96)
32 1ubd_C Protein (YY1 zinc finge 67.7 3.8 0.00013 35.0 3.4 42 515-559 80-121 (124)
33 2m0d_A Zinc finger and BTB dom 67.7 2 6.8E-05 27.0 1.3 25 530-556 3-27 (30)
34 2csh_A Zinc finger protein 297 67.6 3.6 0.00012 34.6 3.2 42 515-561 53-94 (110)
35 2cot_A Zinc finger protein 435 67.6 2.4 8.1E-05 33.7 2.0 39 515-558 34-72 (77)
36 2gli_A Protein (five-finger GL 67.0 3 0.0001 37.0 2.7 41 514-557 114-155 (155)
37 2elr_A Zinc finger protein 406 66.3 2.7 9.4E-05 28.0 1.8 25 530-556 9-33 (36)
38 2elm_A Zinc finger protein 406 66.2 1.5 5.2E-05 30.1 0.5 27 530-558 9-35 (37)
39 1a1h_A QGSR zinc finger peptid 65.5 4.8 0.00017 32.2 3.5 39 515-558 50-88 (90)
40 1rik_A E6APC1 peptide; E6-bind 65.1 2.3 7.8E-05 26.8 1.2 23 530-554 2-24 (29)
41 2djr_A Zinc finger BED domain- 64.2 3.9 0.00013 35.3 2.7 33 529-563 27-66 (76)
42 2eln_A Zinc finger protein 406 64.1 3.4 0.00012 30.2 2.1 25 530-554 9-33 (38)
43 2ab3_A ZNF29; zinc finger prot 63.9 3.6 0.00012 25.8 1.9 25 530-554 2-26 (29)
44 1llm_C Chimera of ZIF23-GCN4; 63.6 7.6 0.00026 31.5 4.3 40 514-558 18-57 (88)
45 2elv_A Zinc finger protein 406 63.4 3 0.0001 28.0 1.6 23 530-554 9-31 (36)
46 2m0e_A Zinc finger and BTB dom 63.1 3 0.0001 25.9 1.4 25 530-556 2-26 (29)
47 2kvg_A Zinc finger and BTB dom 63.1 3.1 0.00011 26.4 1.5 23 530-554 3-25 (27)
48 1srk_A Zinc finger protein ZFP 62.8 3.1 0.00011 27.7 1.5 25 530-556 7-31 (35)
49 2ct5_A Zinc finger BED domain 62.7 4.6 0.00016 34.5 2.9 33 530-564 29-64 (73)
50 2lvt_A Zinc finger and BTB dom 66.7 1.6 5.3E-05 27.8 0.0 25 530-556 2-26 (29)
51 1zw8_A Zinc-responsive transcr 62.6 4.6 0.00016 32.8 2.8 27 531-557 2-28 (64)
52 2kvh_A Zinc finger and BTB dom 62.4 3.9 0.00013 25.6 1.9 23 530-554 3-25 (27)
53 1rim_A E6APC2 peptide; E6-bind 62.3 4.8 0.00016 27.0 2.4 24 530-555 2-25 (33)
54 1ncs_A Peptide M30F, transcrip 62.3 2.6 9E-05 30.7 1.2 26 530-555 18-43 (47)
55 2gqj_A Zinc finger protein KIA 62.0 4.5 0.00015 34.0 2.7 36 517-557 14-50 (98)
56 2dlk_A Novel protein; ZF-C2H2 61.9 3.9 0.00013 32.2 2.2 28 530-557 7-34 (79)
57 2ebt_A Krueppel-like factor 5; 61.8 7.3 0.00025 31.8 3.9 35 515-554 63-97 (100)
58 2els_A Zinc finger protein 406 61.4 3 0.0001 28.0 1.3 25 530-556 9-33 (36)
59 1f2i_G Fusion of N-terminal 17 61.2 6.4 0.00022 30.6 3.4 35 515-554 37-71 (73)
60 2lvr_A Zinc finger and BTB dom 64.9 1.8 6.1E-05 27.5 0.0 26 530-557 3-28 (30)
61 2kvf_A Zinc finger and BTB dom 60.5 4.3 0.00015 25.4 1.8 23 530-554 3-25 (28)
62 2m0f_A Zinc finger and BTB dom 60.1 2.8 9.4E-05 26.2 0.8 23 530-554 2-24 (29)
63 2epx_A Zinc finger protein 28 60.0 5.5 0.00019 28.3 2.5 26 530-557 12-37 (47)
64 2kmk_A Zinc finger protein GFI 60.0 7.8 0.00027 30.3 3.7 36 515-555 45-80 (82)
65 2ep1_A Zinc finger protein 484 59.9 4.5 0.00015 28.7 2.0 25 530-556 12-36 (46)
66 1yui_A GAGA-factor; complex (D 59.8 3.5 0.00012 30.7 1.5 35 518-557 15-49 (54)
67 2ee8_A Protein ODD-skipped-rel 59.8 5.2 0.00018 33.3 2.7 39 515-558 61-99 (106)
68 2eom_A ZFP-95, zinc finger pro 59.8 4 0.00014 29.2 1.8 25 530-556 12-36 (46)
69 2j7j_A Transcription factor II 59.6 6.6 0.00022 30.9 3.2 25 530-554 31-55 (85)
70 2elt_A Zinc finger protein 406 59.6 3.4 0.00012 27.6 1.3 24 530-555 9-32 (36)
71 2en7_A Zinc finger protein 268 59.3 4.1 0.00014 28.5 1.7 23 530-554 12-34 (44)
72 2elq_A Zinc finger protein 406 59.2 3.9 0.00013 27.4 1.6 24 530-555 9-32 (36)
73 2epa_A Krueppel-like factor 10 59.2 3.7 0.00013 32.0 1.6 28 530-557 17-44 (72)
74 2ebt_A Krueppel-like factor 5; 59.1 6.8 0.00023 32.0 3.3 41 514-557 32-72 (100)
75 1wjp_A Zinc finger protein 295 58.9 5.7 0.00019 33.4 2.8 38 515-558 58-95 (107)
76 4gzn_C ZFP-57, zinc finger pro 58.4 6.8 0.00023 31.3 3.1 38 514-557 19-56 (60)
77 2emi_A Zinc finger protein 484 58.4 4 0.00014 29.1 1.5 25 530-556 12-36 (46)
78 1x6h_A Transcriptional repress 58.0 6.5 0.00022 31.2 2.9 27 530-558 47-73 (86)
79 2ct1_A Transcriptional repress 57.9 4.1 0.00014 32.3 1.7 27 530-558 15-41 (77)
80 2eq2_A Zinc finger protein 347 57.3 4.7 0.00016 28.7 1.8 24 530-555 12-35 (46)
81 2dmi_A Teashirt homolog 3; zin 57.3 2.9 9.8E-05 35.5 0.7 38 516-558 69-106 (115)
82 2rpc_A Zinc finger protein ZIC 57.2 4 0.00014 36.4 1.7 42 514-558 107-148 (155)
83 2emg_A Zinc finger protein 484 57.0 4.7 0.00016 28.7 1.7 24 530-555 12-35 (46)
84 2eq1_A Zinc finger protein 347 56.9 4.6 0.00016 28.7 1.7 24 530-555 12-35 (46)
85 2ept_A Zinc finger protein 32; 56.8 3.8 0.00013 28.4 1.2 24 530-555 10-33 (41)
86 2yt9_A Zinc finger-containing 56.7 6.2 0.00021 32.0 2.7 39 515-558 23-61 (95)
87 2yrm_A B-cell lymphoma 6 prote 56.5 5.9 0.0002 28.0 2.2 26 530-557 10-35 (43)
88 2epu_A Zinc finger protein 32; 56.4 3.5 0.00012 29.3 0.9 24 530-555 12-35 (45)
89 2en9_A Zinc finger protein 28 56.2 5.1 0.00017 28.6 1.8 24 530-555 12-35 (46)
90 2eoz_A Zinc finger protein 473 56.2 3.6 0.00012 29.4 1.0 26 530-557 12-37 (46)
91 2enf_A Zinc finger protein 347 55.7 5.6 0.00019 28.3 2.0 24 530-555 12-35 (46)
92 2eoh_A Zinc finger protein 28 55.6 5 0.00017 28.6 1.7 23 530-554 12-34 (46)
93 2enh_A Zinc finger protein 28 55.6 4.8 0.00016 28.7 1.6 23 530-554 12-34 (46)
94 2ee8_A Protein ODD-skipped-rel 55.5 8.8 0.0003 31.8 3.4 39 515-558 33-71 (106)
95 2yth_A Zinc finger protein 224 55.4 5.9 0.0002 28.2 2.1 24 530-555 12-35 (46)
96 2kmk_A Zinc finger protein GFI 55.3 7.5 0.00026 30.4 2.8 38 515-557 17-54 (82)
97 2dmd_A Zinc finger protein 64, 55.2 6.3 0.00022 32.0 2.5 40 514-558 23-62 (96)
98 2ytr_A Zinc finger protein 347 55.2 5.6 0.00019 28.2 1.9 24 530-555 12-35 (46)
99 2csh_A Zinc finger protein 297 55.1 7.4 0.00025 32.6 2.9 40 514-558 24-63 (110)
100 2ytp_A Zinc finger protein 484 54.9 4.3 0.00015 29.0 1.2 24 530-555 12-35 (46)
101 2epz_A Zinc finger protein 28 54.8 5.7 0.0002 28.2 1.9 24 530-555 12-35 (46)
102 2epv_A Zinc finger protein 268 54.8 5.1 0.00018 28.4 1.6 25 530-556 12-36 (44)
103 2eop_A Zinc finger protein 268 54.8 5.7 0.0002 28.1 1.9 23 530-554 12-34 (46)
104 2el5_A Zinc finger protein 268 54.7 4.9 0.00017 27.9 1.5 25 530-556 10-34 (42)
105 2ep3_A Zinc finger protein 484 54.4 4.8 0.00016 28.6 1.4 24 530-555 12-35 (46)
106 2ytf_A Zinc finger protein 268 54.3 4.6 0.00016 28.6 1.3 25 530-556 12-36 (46)
107 2emk_A Zinc finger protein 28 54.3 5.7 0.0002 28.3 1.8 24 530-555 12-35 (46)
108 2yte_A Zinc finger protein 473 54.2 5.9 0.0002 27.4 1.8 23 530-554 10-32 (42)
109 2eq4_A Zinc finger protein 224 54.1 5.6 0.00019 28.2 1.7 24 530-555 12-35 (46)
110 2yrj_A Zinc finger protein 473 54.0 4.6 0.00016 28.6 1.3 24 530-555 12-35 (46)
111 2em6_A Zinc finger protein 224 53.8 5.8 0.0002 28.3 1.8 23 530-554 12-34 (46)
112 2eos_A B-cell lymphoma 6 prote 53.8 5.2 0.00018 27.8 1.5 25 530-556 11-35 (42)
113 2lt7_A Transcriptional regulat 53.7 7.9 0.00027 35.1 3.1 39 515-558 66-104 (133)
114 2eov_A Zinc finger protein 484 53.6 6 0.00021 28.0 1.8 25 530-556 12-36 (46)
115 2ytt_A Zinc finger protein 473 53.6 4.9 0.00017 28.7 1.3 23 530-554 12-34 (46)
116 2em4_A Zinc finger protein 28 53.5 5.1 0.00017 28.6 1.4 25 530-556 12-36 (46)
117 1njq_A Superman protein; zinc- 53.2 5 0.00017 27.6 1.3 25 530-556 6-30 (39)
118 2em3_A Zinc finger protein 28 52.9 4.9 0.00017 28.6 1.3 25 530-556 12-36 (46)
119 2jp9_A Wilms tumor 1; DNA bind 52.9 8.3 0.00028 32.4 2.9 35 515-554 54-88 (119)
120 2eps_A POZ-, at HOOK-, and zin 52.8 6.8 0.00023 29.2 2.1 26 530-557 12-37 (54)
121 2eou_A Zinc finger protein 473 52.8 6.5 0.00022 27.7 1.9 24 530-555 12-35 (44)
122 2eon_A ZFP-95, zinc finger pro 52.6 5.3 0.00018 28.5 1.4 23 530-554 12-34 (46)
123 2epc_A Zinc finger protein 32; 52.5 5.1 0.00017 27.7 1.3 24 530-555 11-34 (42)
124 2eof_A Zinc finger protein 268 52.4 5.7 0.00019 27.8 1.5 23 530-554 12-34 (44)
125 2eml_A Zinc finger protein 28 52.3 5.8 0.0002 28.2 1.6 25 530-556 12-36 (46)
126 2wbs_A Krueppel-like factor 4; 52.3 11 0.00038 30.0 3.4 35 515-554 53-87 (89)
127 2ytq_A Zinc finger protein 268 52.3 6.2 0.00021 28.1 1.7 23 530-554 12-34 (46)
128 2yti_A Zinc finger protein 347 52.3 6.2 0.00021 28.0 1.7 23 530-554 12-34 (46)
129 2eq3_A Zinc finger protein 347 52.1 4.5 0.00016 28.6 1.0 23 530-554 12-34 (46)
130 2eow_A Zinc finger protein 347 51.9 5.4 0.00018 28.3 1.3 24 530-555 12-35 (46)
131 2em0_A Zinc finger protein 224 51.9 7 0.00024 27.7 2.0 23 530-554 12-34 (46)
132 2emj_A Zinc finger protein 28 51.8 5.7 0.0002 28.3 1.5 23 530-554 12-34 (46)
133 2emf_A Zinc finger protein 484 51.7 5.5 0.00019 28.4 1.4 24 530-555 12-35 (46)
134 2ytn_A Zinc finger protein 347 51.4 6.6 0.00023 27.9 1.8 24 530-555 12-35 (46)
135 2emm_A ZFP-95, zinc finger pro 51.3 5.5 0.00019 28.2 1.3 24 530-555 12-35 (46)
136 1x6h_A Transcriptional repress 51.3 3.9 0.00013 32.5 0.6 27 530-558 15-41 (86)
137 2ytm_A Zinc finger protein 28 51.1 8.6 0.00029 27.4 2.3 23 530-554 12-34 (46)
138 2yto_A Zinc finger protein 484 51.0 5.5 0.00019 28.4 1.3 23 530-554 12-34 (46)
139 2j7j_A Transcription factor II 51.0 13 0.00044 29.1 3.6 26 531-556 59-85 (85)
140 2emy_A Zinc finger protein 268 51.0 6 0.0002 28.1 1.5 24 530-555 12-35 (46)
141 1x3c_A Zinc finger protein 292 51.0 9.2 0.00031 33.0 2.8 28 530-557 27-54 (73)
142 2em5_A ZFP-95, zinc finger pro 50.7 5.6 0.00019 28.4 1.3 23 530-554 12-34 (46)
143 2jp9_A Wilms tumor 1; DNA bind 50.6 13 0.00045 31.2 3.8 38 514-554 81-118 (119)
144 2em7_A Zinc finger protein 224 50.5 6.3 0.00022 28.0 1.5 25 530-556 12-36 (46)
145 1a1h_A QGSR zinc finger peptid 50.4 8.9 0.0003 30.6 2.6 39 514-557 21-59 (90)
146 2yts_A Zinc finger protein 484 50.4 5.9 0.0002 28.1 1.3 23 530-554 12-34 (46)
147 2elp_A Zinc finger protein 406 50.1 4.7 0.00016 27.2 0.8 23 530-554 9-32 (37)
148 2ep0_A Zinc finger protein 28 50.1 5.9 0.0002 28.1 1.3 23 530-554 12-34 (46)
149 2elz_A Zinc finger protein 224 50.1 7 0.00024 27.8 1.7 23 530-554 12-34 (46)
150 2el4_A Zinc finger protein 268 50.0 5.8 0.0002 28.1 1.2 23 530-554 12-34 (46)
151 2emx_A Zinc finger protein 268 50.0 6.1 0.00021 27.8 1.3 24 530-555 10-33 (44)
152 2ene_A Zinc finger protein 347 49.8 5.7 0.0002 28.2 1.2 23 530-554 12-34 (46)
153 2ytb_A Zinc finger protein 32; 49.8 4.9 0.00017 27.8 0.8 24 530-555 11-34 (42)
154 2gli_A Protein (five-finger GL 49.7 9 0.00031 33.8 2.7 42 514-558 84-125 (155)
155 2el6_A Zinc finger protein 268 49.7 6.8 0.00023 27.9 1.6 25 530-556 12-36 (46)
156 2eor_A Zinc finger protein 224 49.4 4.8 0.00016 28.5 0.7 23 530-554 12-34 (46)
157 2wbt_A B-129; zinc finger; 2.7 49.4 5.3 0.00018 34.6 1.1 28 530-559 100-127 (129)
158 2ytj_A Zinc finger protein 484 49.4 6.1 0.00021 28.0 1.3 23 530-554 12-34 (46)
159 2eq0_A Zinc finger protein 347 49.4 5.9 0.0002 28.1 1.2 24 530-555 12-35 (46)
160 1f2i_G Fusion of N-terminal 17 49.3 5.8 0.0002 30.8 1.3 25 530-554 19-43 (73)
161 2drp_A Protein (tramtrack DNA- 49.3 8.1 0.00028 29.4 2.1 25 530-556 10-34 (66)
162 2ytk_A Zinc finger protein 347 49.2 6.5 0.00022 27.9 1.4 24 530-555 12-35 (46)
163 2eoj_A Zinc finger protein 268 49.0 5.7 0.00019 27.8 1.1 23 530-554 12-34 (44)
164 2ema_A Zinc finger protein 347 49.0 6 0.00021 28.1 1.2 23 530-554 12-34 (46)
165 2eoq_A Zinc finger protein 224 48.8 7.6 0.00026 27.5 1.7 23 530-554 12-34 (46)
166 2lvu_A Zinc finger and BTB dom 54.4 3.7 0.00013 25.5 0.0 23 530-554 2-24 (26)
167 2en6_A Zinc finger protein 268 48.5 5.7 0.00019 28.2 1.0 25 530-556 12-36 (46)
168 2eme_A Zinc finger protein 473 48.4 7.3 0.00025 27.6 1.6 24 530-555 12-35 (46)
169 2em9_A Zinc finger protein 224 48.2 6.8 0.00023 27.7 1.4 23 530-554 12-34 (46)
170 2en3_A ZFP-95, zinc finger pro 48.1 5.5 0.00019 28.3 0.9 23 530-554 12-34 (46)
171 2wbs_A Krueppel-like factor 4; 48.1 7.5 0.00026 31.0 1.8 25 530-554 5-29 (89)
172 1bbo_A Human enhancer-binding 48.1 9.4 0.00032 28.1 2.2 25 531-557 2-26 (57)
173 2ely_A Zinc finger protein 224 48.0 8.1 0.00028 27.5 1.8 24 530-555 12-35 (46)
174 2emh_A Zinc finger protein 484 48.0 5.3 0.00018 28.4 0.8 23 530-554 12-34 (46)
175 2emp_A Zinc finger protein 347 47.9 5.3 0.00018 28.4 0.8 23 530-554 12-34 (46)
176 2epq_A POZ-, at HOOK-, and zin 47.6 7.4 0.00025 27.5 1.5 25 530-556 10-34 (45)
177 1zw8_A Zinc-responsive transcr 47.6 17 0.00058 29.4 3.8 28 529-556 37-64 (64)
178 2yu5_A Zinc finger protein 473 47.5 6.2 0.00021 27.7 1.1 25 530-556 12-36 (44)
179 2ent_A Krueppel-like factor 15 47.4 6.8 0.00023 27.9 1.3 25 530-554 12-36 (48)
180 2emz_A ZFP-95, zinc finger pro 47.4 8.5 0.00029 27.4 1.8 23 530-554 12-34 (46)
181 3uk3_C Zinc finger protein 217 47.2 7.5 0.00026 28.6 1.5 24 530-555 4-27 (57)
182 2eoe_A Zinc finger protein 347 47.1 7.2 0.00025 27.6 1.4 24 530-555 12-35 (46)
183 2emb_A Zinc finger protein 473 47.1 7.2 0.00024 27.4 1.3 24 530-555 12-35 (44)
184 2em2_A Zinc finger protein 28 46.7 7 0.00024 27.8 1.3 24 530-555 12-35 (46)
185 1ubd_C Protein (YY1 zinc finge 46.7 9.8 0.00033 32.4 2.4 38 515-555 50-87 (124)
186 2ep2_A Zinc finger protein 484 46.5 7.4 0.00025 27.6 1.3 24 530-555 12-35 (46)
187 2rpc_A Zinc finger protein ZIC 46.5 13 0.00044 33.0 3.2 40 515-557 78-117 (155)
188 2adr_A ADR1; transcription reg 46.0 11 0.00036 28.1 2.2 25 530-556 2-26 (60)
189 2eoy_A Zinc finger protein 473 45.6 7.4 0.00025 27.7 1.2 23 530-554 12-34 (46)
190 1zr9_A Zinc finger protein 593 45.3 7.6 0.00026 36.3 1.5 33 530-564 50-83 (124)
191 2eoo_A ZFP-95, zinc finger pro 45.2 7.2 0.00025 27.8 1.1 23 530-554 12-34 (46)
192 2en8_A Zinc finger protein 224 45.0 7.6 0.00026 27.4 1.2 24 530-555 12-35 (46)
193 2eox_A Zinc finger protein 473 44.5 4.3 0.00015 28.6 -0.2 25 530-556 12-36 (44)
194 2yso_A ZFP-95, zinc finger pro 44.3 8.3 0.00029 27.3 1.3 24 530-555 12-35 (46)
195 2ysp_A Zinc finger protein 224 44.1 6.8 0.00023 27.8 0.8 23 530-554 12-34 (46)
196 3foz_A TRNA delta(2)-isopenten 43.7 20 0.0007 38.0 4.7 49 224-273 247-295 (316)
197 2em8_A Zinc finger protein 224 43.7 11 0.00037 26.8 1.9 23 530-554 12-34 (46)
198 2i13_A AART; DNA binding, zinc 43.7 15 0.00051 33.8 3.3 40 514-558 148-187 (190)
199 2en1_A Zinc finger protein 224 43.2 9.2 0.00031 27.1 1.4 24 530-555 12-35 (46)
200 2lce_A B-cell lymphoma 6 prote 42.8 12 0.00041 29.3 2.2 26 530-557 17-42 (74)
201 2ytd_A Zinc finger protein 473 42.8 8.8 0.0003 27.2 1.3 23 530-554 12-34 (46)
202 2ytg_A ZFP-95, zinc finger pro 41.8 6.1 0.00021 28.1 0.3 25 530-556 12-36 (46)
203 2dlq_A GLI-kruppel family memb 41.8 22 0.00077 29.8 3.9 26 530-557 66-91 (124)
204 2enc_A Zinc finger protein 224 41.3 9.6 0.00033 27.0 1.3 23 530-554 12-34 (46)
205 2epr_A POZ-, at HOOK-, and zin 41.1 8.2 0.00028 27.9 0.9 25 530-556 12-36 (48)
206 2epw_A Zinc finger protein 268 40.9 9.2 0.00031 27.0 1.1 23 530-554 12-34 (46)
207 1x5w_A Zinc finger protein 64, 40.7 12 0.00042 28.9 1.9 26 530-557 9-34 (70)
208 2ctd_A Zinc finger protein 512 40.6 18 0.00063 30.7 3.1 23 530-554 34-57 (96)
209 2lv2_A Insulinoma-associated p 39.5 10 0.00036 32.2 1.4 27 530-558 28-54 (85)
210 2en2_A B-cell lymphoma 6 prote 39.4 7.4 0.00025 26.9 0.4 23 530-554 11-33 (42)
211 1x6e_A Zinc finger protein 24; 39.4 12 0.00041 29.2 1.7 25 530-556 14-38 (72)
212 2jsp_A Transcriptional regulat 38.3 14 0.00046 32.9 2.0 32 529-565 20-51 (87)
213 2epp_A POZ-, at HOOK-, and zin 38.2 17 0.00058 29.8 2.4 26 530-557 13-38 (66)
214 2ej4_A Zinc finger protein ZIC 38.2 17 0.0006 29.4 2.5 27 530-558 25-51 (95)
215 2yu8_A Zinc finger protein 347 34.6 9.5 0.00032 27.0 0.3 23 530-554 12-34 (46)
216 3exa_A TRNA delta(2)-isopenten 34.6 81 0.0028 33.6 7.5 49 225-274 240-288 (322)
217 2d9h_A Zinc finger protein 692 34.3 18 0.0006 28.5 1.9 26 530-557 7-32 (78)
218 1tf6_A Protein (transcription 34.3 26 0.00088 32.2 3.3 27 530-556 104-130 (190)
219 2ej4_A Zinc finger protein ZIC 33.7 24 0.00081 28.6 2.6 22 531-554 63-84 (95)
220 2ghf_A ZHX1, zinc fingers and 33.6 22 0.00076 31.2 2.6 26 530-557 50-75 (102)
221 2cot_A Zinc finger protein 435 32.4 21 0.00073 28.0 2.1 25 530-556 18-42 (77)
222 4i1l_A Scurfin, forkhead box p 32.2 15 0.00051 33.0 1.2 26 532-557 14-39 (93)
223 1tf6_A Protein (transcription 30.6 40 0.0014 30.9 4.0 40 515-557 60-99 (190)
224 2elu_A Zinc finger protein 406 30.0 26 0.00087 26.3 1.9 25 530-556 9-33 (37)
225 2kfq_A FP1; protein, de novo p 29.4 3.8 0.00013 27.2 -2.4 23 530-554 2-24 (32)
226 2eod_A TNF receptor-associated 27.7 31 0.0011 26.4 2.3 35 515-554 25-59 (66)
227 3crm_A TRNA delta(2)-isopenten 27.5 1E+02 0.0035 32.5 6.9 49 225-274 254-302 (323)
228 2i13_A AART; DNA binding, zinc 27.1 32 0.0011 31.6 2.6 37 515-556 121-157 (190)
229 2lt7_A Transcriptional regulat 25.7 48 0.0016 29.9 3.4 36 514-554 37-72 (133)
230 2yrk_A Zinc finger homeobox pr 25.3 33 0.0011 28.2 2.0 30 530-561 13-43 (55)
231 2dmi_A Teashirt homolog 3; zin 25.1 17 0.00057 30.7 0.2 23 530-554 19-41 (115)
232 1llm_C Chimera of ZIF23-GCN4; 24.5 23 0.0008 28.5 1.0 24 530-555 3-26 (88)
233 4gzn_C ZFP-57, zinc finger pro 22.8 39 0.0013 26.8 2.0 23 530-554 4-26 (60)
234 2kw6_A Cyclin-dependent kinase 22.7 34 0.0012 29.0 1.7 19 366-384 36-54 (65)
235 1fv5_A First zinc finger of U- 22.7 36 0.0012 24.6 1.6 21 530-552 8-28 (36)
236 3cw1_L U1 small nuclear ribonu 22.0 71 0.0024 27.7 3.6 34 530-565 3-39 (77)
237 3d3q_A TRNA delta(2)-isopenten 21.4 54 0.0019 35.0 3.3 50 224-274 245-294 (340)
238 4dgw_A PRE-mRNA-splicing facto 21.3 1.1E+02 0.0037 33.7 5.7 23 529-553 291-313 (402)
239 1wir_A Protein arginine N-meth 21.1 61 0.0021 30.1 3.2 48 529-578 14-65 (121)
240 2eod_A TNF receptor-associated 21.0 31 0.0011 26.4 1.1 25 530-558 10-34 (66)
No 1
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}
Probab=100.00 E-value=4.8e-98 Score=793.78 Aligned_cols=353 Identities=78% Similarity=1.202 Sum_probs=285.9
Q ss_pred CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHhhccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 004439 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLD 303 (753)
Q Consensus 224 ~lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HKdEeWFrEKY~P~~l~~v~erRnE~~~~aak~Fi~d 303 (753)
+||||||||++|+|+|||+||+++|++||.+|.++|++.||++||+++|||+||||+++++++++|+++++++++.|+++
T Consensus 1 glmsFKqFl~~~~D~isp~eA~~~Y~eYk~e~~~~q~~~FF~~HK~e~WfreKY~P~~l~~~~~~R~e~ak~~a~~F~~~ 80 (358)
T 3ax1_A 1 GLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERRNDLAQKVAKDFLLD 80 (358)
T ss_dssp CCCCHHHHGGGTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcccccccCCCCCCCCCchhHHHHhHHHHHHHHH
Q 004439 304 LQSGTLDLGPSVNASSSNKLGQTSEPNSDDDVDNGGKRRRHGRGPAKETDLLSAAPKAHPISSEPRRIQVDIEQAQALVR 383 (753)
Q Consensus 304 LesGtlD~~pgv~~~~sdksG~~sdpnse~e~~~~~Kr~R~Gwv~fkesD~~s~aPKahPi~S~peRI~~DLeqAr~LV~ 383 (753)
|++|+||+++++++. +++|.+++++++++++.++|++++||++.+++|++++||++||+||+|+||++||+||++||+
T Consensus 81 L~~G~ld~~~~~~~~--~~~~~~~~~~~~d~~~~~~k~~~~g~~~~~~~d~~~~ap~~~P~~S~p~RI~~Dle~a~~Lv~ 158 (358)
T 3ax1_A 81 LQSGTLDLGPAVTAL--NKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAPKAPSFTSDPKRILTDVEQTQALVR 158 (358)
T ss_dssp HHTTCCCCCSBSSCC--C-----------------------------------CCCBCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCccccc--cccCCCCCCChhhhhhccccccccCCCcccccchhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999998888774 677878899998888888899999999999999999999999999999999999999999999
Q ss_pred HHhhhccccccccCCCCcccccccccCC-CCCCceeecccccccCcchhhHHHHHHHHHHHHhhcccccccccccccccc
Q 004439 384 KLDSEKGITENILCGSDNDKMNREKSHG-STGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMVETSEAKGLR 462 (753)
Q Consensus 384 kLDaEkGIe~N~L~~~d~~~~d~dksh~-s~gp~~i~rg~~~veg~e~~e~LDllI~YLRrVHsvDYY~~~E~dercgl~ 462 (753)
+||+|+||++|+|..+++...+.++++. ++||++|++++.++++++.+++||++|+|||+||||||||++||+++||++
T Consensus 159 kLD~e~gie~n~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~LD~~i~YLRrVH~~dYY~~~E~~~~~g~~ 238 (358)
T 3ax1_A 159 KLDSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGVELLDTLVTYLWRVHGLDYYGKVETNEAKGLR 238 (358)
T ss_dssp HHHHHHTCCCCTTC---------------CCCCCEEECCSSCCEEECSHHHHHHHHHHHHHHHCEEGGGTEECTTCCSBC
T ss_pred HHHHhhCCcccccccccccccccccccccCCCcchhhccccchhhhhhHHHHHHHHHHHHHHHcccccceEeecCccccC
Confidence 9999999999999998776677777775 789999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCccCCchhhHHHhhHHHHHHHhhcCChhhHhhhhhhHHHHHHHhhhhHHHhhhhcccCcccccCCCCccccc
Q 004439 463 HVRAEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLF 542 (753)
Q Consensus 463 HvR~~~k~~~~~s~~~dWeKklD~~~q~rL~~~Dple~l~~kdkID~el~e~le~fVkk~~DEk~g~K~rC~v~gCtKLF 542 (753)
|||++.++.+ .+..+|+++|+++|+.+|+..||+++++++++|+++++++|+++|+|++||+|||||+|.+++|+|||
T Consensus 239 HvR~~~~~~~--~~~~~we~~ld~~w~~~l~~~dp~~~~lg~k~ie~~~~e~l~~~v~k~~dE~~gwK~~C~~~~C~KLF 316 (358)
T 3ax1_A 239 HVRAEGKVSD--AKGDENESKFDSHWQERLKGQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLF 316 (358)
T ss_dssp CBC------------CHHHHHHHHHHHHHHHSCCHHHHHHCHHHHHHHHHHHHGGGEEEEECSSSSEEEEECSSSCCCEE
T ss_pred eecCCCCCCC--CchhhHHHHHHHHHHHHHcccChHHHHhcCccHHHHHHHHHHHHHHHHhhcccccccCCCCCCcCccc
Confidence 9999877543 36678999999999999999999998888989999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhChHHHHHHHhhHHHHHHHhhhccCC
Q 004439 543 HAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDP 580 (753)
Q Consensus 543 KgpEFV~KHI~nKH~E~Veev~~kv~E~~yFNNYl~DP 580 (753)
||+|||+|||+|||+|+|++++++|+|.+||+|||.--
T Consensus 317 k~~eFV~KHi~~KH~e~v~~~~~~v~~~~~~~~~~~~~ 354 (358)
T 3ax1_A 317 HAAEFVYKHLKLKHTELVTELTTKVREELYFQNYLEHH 354 (358)
T ss_dssp SSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999643
No 2
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=84.84 E-value=0.25 Score=37.38 Aligned_cols=41 Identities=27% Similarity=0.539 Sum_probs=31.5
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChHH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E~ 559 (753)
.|..+++..+.++ .|.|.+ |+|.|.....+.+||...|...
T Consensus 17 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 17 HLKRHYRSHTNEK---PYPCGL--CNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp HHHHHHHTTTSSC---SEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHhCCCC---CccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence 3455666555553 699984 9999999999999999888753
No 3
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=84.60 E-value=0.51 Score=40.45 Aligned_cols=40 Identities=20% Similarity=0.448 Sum_probs=33.0
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++..+.|+ .|.|. .|.|.|.....+.+||+..|+.
T Consensus 43 ~L~~H~~~H~~~k---~~~C~--~C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 43 AQERHLRLLHAAQ---VFPCK--YCPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp HHHHHHHTTSCSS---SEECT--TSSCEESSHHHHHHHHHTTCTT
T ss_pred HHhhhhhhccCCC---ccCCC--CCCCEeCCHHHHHHhCcccCcC
Confidence 4556777666664 69998 5999999999999999999975
No 4
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=83.24 E-value=0.52 Score=36.93 Aligned_cols=40 Identities=23% Similarity=0.318 Sum_probs=30.3
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++....++ .|.|.+ |.|.|....-+.+|+++.|.+
T Consensus 24 ~L~~H~~~H~~~~---~~~C~~--C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 24 ALRIHERIHCTDR---PFKCNY--CSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp HHHHHHGGGCCSC---SEECSS--SSCEESSHHHHHHHHHHHHSS
T ss_pred HHHHHHHHcCCCC---CEeCCC--CCCccCCHHHHHHHHHHHhCC
Confidence 3445665544453 599984 999999999999999887765
No 5
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=82.30 E-value=0.75 Score=34.21 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=30.7
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++....++ .|.|. .|+|.|.....+..|+...|.+
T Consensus 16 ~l~~H~~~h~~~~---~~~C~--~C~~~f~~~~~l~~H~~~h~~~ 55 (57)
T 1bbo_A 16 MLKKHIRTHTDVR---PYHCT--YCNFSFKTKGNLTKHMKSKAHS 55 (57)
T ss_dssp HHHHHHHHTSSCC---CEECS--SSSCEESSHHHHHHHHHSSSSC
T ss_pred HHHHHHHhcCCCC---CccCC--CCCchhcCHHHHHHHHHHhccc
Confidence 3455666554443 69998 4999999999999999987765
No 6
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.41 E-value=1.4 Score=35.01 Aligned_cols=28 Identities=32% Similarity=0.654 Sum_probs=25.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChHH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E~ 559 (753)
.|.|.+ |+|.|....-+.+|++..|...
T Consensus 38 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 38 RFPCEF--CGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHTSTTT
T ss_pred ccCCCC--CCchhCCHHHHHHHHHHhCCCC
Confidence 799984 9999999999999999999763
No 7
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.86 E-value=0.83 Score=38.61 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=20.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|.+ |.|.|+...-+.+|++..|.+
T Consensus 54 ~~~C~~--C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 54 ALKCQH--CRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHSCSS--SCCCCSCHHHHHHHHHHHSCS
T ss_pred CEECCC--CCCccCCHHHHHHHHHHHcCC
Confidence 577874 888888888888888776654
No 8
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=79.53 E-value=1.6 Score=32.30 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=29.1
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhC
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|..+++..+.++ .|.|.+ |+|.|....-+..|+...|
T Consensus 19 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 19 YLNIHLRTHTGEK---PYKCEF--CEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp HHHHHHHHHHCCC---CEECSS--SSCEESSHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCC---CcCCCC--CcchhCCHHHHHHHHHHhc
Confidence 3445666555553 589984 9999999999999998877
No 9
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=77.99 E-value=1.9 Score=35.14 Aligned_cols=41 Identities=27% Similarity=0.453 Sum_probs=29.6
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++....+. ...|.|. .|.|.|....-+.+||+..|..
T Consensus 51 l~~H~~~h~~~~-~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 51 MSYHVRSHDGSV-GKPYICQ--SCGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp HHHHHHHHCCCC-CSSBCCS--SSCCCBSSHHHHHHHHHHTSCC
T ss_pred HHHHHHHhcCCC-CCceECC--CccchhCCHHHHHHHHHHhcCC
Confidence 444555443331 1268998 4999999999999999988864
No 10
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=77.19 E-value=1.3 Score=27.97 Aligned_cols=26 Identities=27% Similarity=0.482 Sum_probs=22.3
Q ss_pred cccCCCCccccccchhHHHHHHhhhChH
Q 004439 531 YGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 531 ~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|.|. .|+|.|.....+..|+..-|.+
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~h~~~ 28 (30)
T 1klr_A 3 YQCQ--YCEFRSADSSNLKTHIKTKHSK 28 (30)
T ss_dssp CCCS--SSSCCCSCSHHHHHHHHHHTSS
T ss_pred ccCC--CCCCccCCHHHHHHHHHHHccC
Confidence 6897 5999999999999999876654
No 11
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=76.65 E-value=1.6 Score=27.22 Aligned_cols=23 Identities=26% Similarity=0.706 Sum_probs=19.8
Q ss_pred cccCCCCccccccchhHHHHHHhhh
Q 004439 531 YGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 531 ~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
|.|. .|+|.|....-+.+|+..-
T Consensus 2 ~~C~--~C~k~f~~~~~l~~H~~~h 24 (27)
T 1znf_A 2 YKCG--LCERSFVEKSALSRHQRVH 24 (27)
T ss_dssp CBCS--SSCCBCSSHHHHHHHGGGT
T ss_pred ccCC--CCCCcCCCHHHHHHHHHHc
Confidence 6787 5999999999999998753
No 12
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=76.40 E-value=1.5 Score=34.49 Aligned_cols=38 Identities=26% Similarity=0.383 Sum_probs=28.1
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhC
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|..+++....++ .|.|.+ |.|.|....-+.+|++.-+
T Consensus 29 ~L~~H~~~h~~~~---~~~C~~--C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 29 ILVQHQRVHTGEK---PYKCLE--CGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp HHHHHHHGGGCSC---CEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCC---CeECCC--CCcccCCHHHHHHHHHhcC
Confidence 3445666555453 689984 9999999999999997643
No 13
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=76.31 E-value=1.6 Score=27.77 Aligned_cols=26 Identities=27% Similarity=0.719 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|. .|+|.|.....+..|+...|.
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 2 AYACG--LCNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp CSBCT--TTCCBCSSSHHHHHHHTTTSC
T ss_pred CcCCc--ccCcccCChHHHHHHHHHHcc
Confidence 37897 599999999999999766664
No 14
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=75.61 E-value=2 Score=36.50 Aligned_cols=40 Identities=20% Similarity=0.384 Sum_probs=30.9
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++....++ .|.|.+ |+|.|....-+.+|+.+.|..
T Consensus 81 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 81 ELRLHMVSHTGEM---PYKCSS--CSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp HHHHHHHHHSSSC---SEECSS--SCCEESSHHHHHHHHHHTSSC
T ss_pred HHHHHHHHcCCCC---CccCCC--ccchhCCHHHHHHHHHHHCCC
Confidence 3445665554553 699984 999999999999999999975
No 15
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=74.82 E-value=1.7 Score=28.45 Aligned_cols=26 Identities=31% Similarity=0.588 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|....|+|.|....-+..|+..-
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~H 28 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKSH 28 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHHc
Confidence 47897556999999999999999763
No 16
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.64 E-value=2.5 Score=33.55 Aligned_cols=27 Identities=22% Similarity=0.480 Sum_probs=23.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 45 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 45 KFHCPH--CDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred ccCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 689984 999999999999999998864
No 17
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=74.18 E-value=1.6 Score=28.46 Aligned_cols=27 Identities=19% Similarity=0.404 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|....|+|.|....-+..|+..-.
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~H~ 28 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRTHT 28 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence 367875579999999999999997633
No 18
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=73.75 E-value=1.9 Score=33.98 Aligned_cols=39 Identities=23% Similarity=0.433 Sum_probs=27.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++....++ .|.|.+ |+|.|....-+.+|++.-+.|
T Consensus 33 l~~H~~~H~~~~---~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 71 (74)
T 2lce_A 33 LASHKTVHTGEK---PYRCNI--CGAQFNRPANLKTHTRIHSGE 71 (74)
T ss_dssp HHHHHHHHCCCC---SEECTT--TCCEESCHHHHHHHHHHHCCS
T ss_pred HHHHHHHcCCCC---CEECCC--CCchhCCHHHHHHHHHhcCCC
Confidence 445665554443 589974 999999999999998765443
No 19
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=73.01 E-value=1.5 Score=29.06 Aligned_cols=27 Identities=26% Similarity=0.464 Sum_probs=22.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|. .|+|.|....-+..|+..-+.+
T Consensus 7 ~~~C~--~C~k~f~~~~~L~~H~~~h~~~ 33 (35)
T 2elx_A 7 GYVCA--LCLKKFVSSIRLRSHIREVHGA 33 (35)
T ss_dssp SEECS--SSCCEESSHHHHHHHHHHTSCT
T ss_pred CeECC--CCcchhCCHHHHHHHHHHHcCC
Confidence 58998 5999999999999999875543
No 20
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=72.71 E-value=1.4 Score=30.08 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+..|+|.|....-+..|+..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 5899866799999999999999875
No 21
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=72.64 E-value=2.8 Score=32.10 Aligned_cols=26 Identities=31% Similarity=0.542 Sum_probs=23.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|. .|+|.|.....+..|++..|.
T Consensus 40 ~~~C~--~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 40 VYPCP--FCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CEECT--TTCCEESCHHHHHHHHHHHTC
T ss_pred CeECC--CCCCccCCHHHHHHHHHHHcC
Confidence 68998 499999999999999998874
No 22
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=72.56 E-value=1.5 Score=32.65 Aligned_cols=26 Identities=27% Similarity=0.510 Sum_probs=24.5
Q ss_pred cccCCCCccccccchhHHHHHHhhhChH
Q 004439 531 YGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 531 ~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|.|++ |-|-|..++-+.+|-.+||.+
T Consensus 6 FiCP~--C~~~l~s~~~L~~Hye~~H~~ 31 (34)
T 3mjh_B 6 FICPQ--CMKSLGSADELFKHYEAVHDA 31 (34)
T ss_dssp EECTT--TCCEESSHHHHHHHHHHHTSS
T ss_pred cCCcH--HHHHcCCHHHHHHHHHhcccc
Confidence 89985 999999999999999999986
No 23
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=70.96 E-value=1.5 Score=30.20 Aligned_cols=25 Identities=24% Similarity=0.608 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+..|+|.|.....+..|+..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 5899765799999999999999875
No 24
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=70.92 E-value=1.9 Score=31.78 Aligned_cols=27 Identities=22% Similarity=0.445 Sum_probs=23.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 7 p~~C~~--C~k~F~~~~~L~~H~~~~H~~ 33 (48)
T 3iuf_A 7 PYACDI--CGKRYKNRPGLSYHYAHSHLA 33 (48)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHSSCC
T ss_pred CEECCC--cCcccCCHHHHHHHhhhhcCC
Confidence 589984 999999999999999855754
No 25
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=70.88 E-value=2.9 Score=32.91 Aligned_cols=39 Identities=23% Similarity=0.511 Sum_probs=28.7
Q ss_pred hhhhHHH-hhhhcccCcccccCCCCccccccchhHHHHHHhhh
Q 004439 514 ALDPFVR-KIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 514 ~le~fVk-k~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|..+++ ....++ .|.|...+|+|.|....-+..|++.-
T Consensus 24 ~L~~H~~~~H~~~~---~~~C~~~~C~k~f~~~~~L~~H~~~H 63 (79)
T 2dlk_A 24 YLNHHKKYQHIHQK---SFSCPEPACGKSFNFKKHLKEHMKLH 63 (79)
T ss_dssp HHHHHHHHGGGSCC---CEECSCTTTCCEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC---CeECCCCCCcCccCCHHHHHHHHHHh
Confidence 4455665 344443 68998666999999999999998753
No 26
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=70.85 E-value=2 Score=27.02 Aligned_cols=25 Identities=24% Similarity=0.610 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|.....+..|+..-+
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h~ 26 (29)
T 1ard_A 2 SFVCE--VCTRAFARQEHLKRHYRSHT 26 (29)
T ss_dssp CCBCT--TTCCBCSSHHHHHHHHHHHS
T ss_pred CeECC--CCCcccCCHHHHHHHHHHhc
Confidence 37897 59999999999999988643
No 27
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=70.63 E-value=2.4 Score=34.58 Aligned_cols=39 Identities=21% Similarity=0.411 Sum_probs=28.3
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++....++ .|.|.+ |+|.|....-+.+|++.-|.+
T Consensus 52 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 52 LNKHLRIHSDER---PFKCQI--CPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp HHHHHHHSCCCC---CEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred HHHHHHHhCCCC---CccCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 444555544443 688984 999999999999999876654
No 28
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=69.79 E-value=2.7 Score=28.35 Aligned_cols=24 Identities=21% Similarity=0.553 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|.|.|.....+..|+..-
T Consensus 11 ~~~C~--~C~k~f~~~~~l~~H~~~H 34 (37)
T 1p7a_A 11 PFQCP--DCDRSFSRSDHLALHRKRH 34 (37)
T ss_dssp SBCCT--TTCCCBSSHHHHHHHHGGG
T ss_pred CccCC--CCCcccCcHHHHHHHHHHh
Confidence 68998 5999999999999998763
No 29
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=69.14 E-value=3 Score=32.58 Aligned_cols=36 Identities=28% Similarity=0.604 Sum_probs=24.3
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLK 553 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~ 553 (753)
|..+++..+.++ .|.|.+..|.|.|....-+.+|++
T Consensus 35 L~~H~~~H~~~~---~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 35 LKAHTRTHTGEK---PFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp HHHHHHHHSSSC---SEECCCTTCCCEESSHHHHHHHTT
T ss_pred HHHHHHhcCCCC---CccCCCCCCCcccCCHHHHHhHhh
Confidence 344555444443 578865568888888888888875
No 30
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.04 E-value=1.7 Score=29.42 Aligned_cols=27 Identities=37% Similarity=0.849 Sum_probs=22.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|. .|+|.|....-+..|+..-+.|
T Consensus 9 ~~~C~--~C~k~f~~~~~l~~H~~~h~~~ 35 (37)
T 2elo_A 9 SYSCP--VCEKSFSEDRLIKSHIKTNHPE 35 (37)
T ss_dssp CCEET--TTTEECSSHHHHHHHHHHHCSS
T ss_pred CcCCC--CCCCccCCHHHHHHHHHHHcCC
Confidence 58998 4999999999999999875543
No 31
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.54 E-value=2.8 Score=35.82 Aligned_cols=39 Identities=15% Similarity=0.355 Sum_probs=29.4
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++.. .|+ .|.|. .|+|.|+...-+.+||...|.+
T Consensus 50 ~L~~H~~~h-~~k---~~~C~--~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 50 GLKKHMENC-KQE---MFTCH--HCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp HHHHHHHHH-CCC---CCCCS--SSCCCCSSHHHHHHHHHHHTCC
T ss_pred HHHHHHHHH-CCC---CeECC--CCCCeeCCHHHHHHHhHHhcCC
Confidence 345566654 443 68998 4999999999999997777754
No 32
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=67.74 E-value=3.8 Score=35.01 Aligned_cols=42 Identities=24% Similarity=0.425 Sum_probs=29.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChHH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E~ 559 (753)
|..+++....++ .|.|.+..|+|.|....-+.+|++.-+.++
T Consensus 80 l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k 121 (124)
T 1ubd_C 80 LRTHVRIHTGDR---PYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121 (124)
T ss_dssp HHHHHHHHHCCC---CCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred HHHHHHHhCCCC---ceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence 444555544453 699976679999999999999999866653
No 33
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=67.72 E-value=2 Score=27.03 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 3 ~~~C~--~C~~~f~~~~~l~~H~~~h~ 27 (30)
T 2m0d_A 3 PYQCD--YCGRSFSDPTSKMRHLETHD 27 (30)
T ss_dssp CEECT--TTCCEESCHHHHHHHHHTTC
T ss_pred CccCC--CCCcccCCHHHHHHHHHHhc
Confidence 47897 49999999999999997643
No 34
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.63 E-value=3.6 Score=34.60 Aligned_cols=42 Identities=21% Similarity=0.320 Sum_probs=30.5
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChHHHH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVI 561 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E~Ve 561 (753)
|..+++....++ .|.|.+ |.|.|.....+.+|++.-|.....
T Consensus 53 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~ 94 (110)
T 2csh_A 53 LVGHMKIHTGIK---PYECNI--CAKRFMWRDSFHRHVTSCTKSYEA 94 (110)
T ss_dssp HHHHHTTTCCCC---CEECSS--SCCEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCC---CeeCCC--CcchhcCHHHHHHHHHHccccccc
Confidence 344555444442 689984 999999999999999987766443
No 35
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.56 E-value=2.4 Score=33.67 Aligned_cols=39 Identities=26% Similarity=0.439 Sum_probs=28.1
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++....++ .|.|.+ |+|.|.....+..|++.-+.+
T Consensus 34 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 72 (77)
T 2cot_A 34 LSKHRRTHTGEK---PYKCDE--CGKAFIQRSHLIGHHRVHTGS 72 (77)
T ss_dssp HHHHHTTTCCSC---SEECSS--SCCEESSHHHHHHHGGGSCCC
T ss_pred HHHHHHHcCCCc---CeeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 444555544443 689984 999999999999999764443
No 36
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=67.01 E-value=3 Score=37.02 Aligned_cols=41 Identities=32% Similarity=0.494 Sum_probs=29.6
Q ss_pred hhhhHH-HhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 004439 514 ALDPFV-RKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 514 ~le~fV-kk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|..++ +..+.++ .|.|.+.+|+|.|....-+.+|+++.|+
T Consensus 114 ~L~~H~~~~H~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~hhg 155 (155)
T 2gli_A 114 DRAKHQNRTHSNEK---PYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155)
T ss_dssp TTHHHHHHTTCSCC---CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred HHHHHHHHhcCCCC---CeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence 345565 3333442 6899866699999999999999988773
No 37
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.26 E-value=2.7 Score=28.04 Aligned_cols=25 Identities=24% Similarity=0.361 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|.|.|....-+..|+..-+
T Consensus 9 ~~~C~--~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elr_A 9 THLCD--MCGKKFKSKGTLKSHKLLHT 33 (36)
T ss_dssp SCBCT--TTCCBCSSHHHHHHHHHHHS
T ss_pred CeecC--cCCCCcCchHHHHHHHHHhc
Confidence 58998 59999999999999987644
No 38
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.17 E-value=1.5 Score=30.12 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=22.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|. .|+|.|....-+.+|+...|..
T Consensus 9 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~ 35 (37)
T 2elm_A 9 LYYCS--QCHYSSITKNCLKRHVIQKHSN 35 (37)
T ss_dssp EEECS--SSSCEEECHHHHHHHHHHHTCC
T ss_pred CeECC--CCCcccCCHHHHHHHHHHHccC
Confidence 58997 5999999999999996556653
No 39
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=65.49 E-value=4.8 Score=32.23 Aligned_cols=39 Identities=23% Similarity=0.515 Sum_probs=27.4
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++....++ .|.|.+ |+|.|....-+.+|++.-+.+
T Consensus 50 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~H~~~ 88 (90)
T 1a1h_A 50 LTTHIRTHTGEK---PFACDI--CGRKFARSDERKRHTKIHLRQ 88 (90)
T ss_dssp HHHHHHHHHCCC---CEECTT--TCCEESSHHHHHHHHGGGGC-
T ss_pred HHHHHHHcCCCC---CccCCC--CCchhCCHHHHHHHHHHhccc
Confidence 444555444442 689984 999999999999999875544
No 40
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=65.12 E-value=2.3 Score=26.82 Aligned_cols=23 Identities=30% Similarity=0.716 Sum_probs=20.2
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|.....+..|+..
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 2 KFACP--ECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp CEECS--SSSCEESCSHHHHHHHTG
T ss_pred CccCC--CCCchhCCHHHHHHHHHH
Confidence 37897 599999999999999976
No 41
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.22 E-value=3.9 Score=35.29 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=28.0
Q ss_pred cccccCCCCcccccc-------chhHHHHHHhhhChHHHHHH
Q 004439 529 WKYGCGAKGCTKLFH-------AAEFVHKHLKLKHPELVIEL 563 (753)
Q Consensus 529 ~K~rC~v~gCtKLFK-------gpEFV~KHI~nKH~E~Veev 563 (753)
.+..|. .|.|.|. +..=+..||+.+|++.|+..
T Consensus 27 ~~A~Ck--~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~~ 66 (76)
T 2djr_A 27 QYATCR--LCGRQVSRGPGVNVGTTALWKHLKSMHREELEKS 66 (76)
T ss_dssp SCEEES--SSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHHT
T ss_pred CEEECC--CCCCccCCCCCCCCchHHHHHHHHHHCHHHHHhc
Confidence 378997 5999998 57889999999999987654
No 42
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.06 E-value=3.4 Score=30.24 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
-|.|...+|.|.|....-+.+|++.
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 4899866799999999999999875
No 43
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=63.86 E-value=3.6 Score=25.76 Aligned_cols=25 Identities=24% Similarity=0.576 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|....|+|.|....-+.+|+..
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 3678744699999999999999875
No 44
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=63.64 E-value=7.6 Score=31.50 Aligned_cols=40 Identities=23% Similarity=0.457 Sum_probs=31.1
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++....++ .|.|. .|+|.|....-+..|+...|..
T Consensus 18 ~L~~H~~~H~~~~---~~~C~--~C~k~f~~~~~L~~H~~~h~~~ 57 (88)
T 1llm_C 18 HLTTHIRTHTGEK---PFACD--ICGRKFARSDERKRHRDIQHIL 57 (88)
T ss_dssp HHHHHHHHHHCCC---CEECT--TTCCEESSHHHHHHHHHHHTHH
T ss_pred HHHHHHHHcCCCC---CccCC--CCCCccCCHHHHHHHHHHhCCC
Confidence 3445666555553 69998 4999999999999999999964
No 45
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.45 E-value=3 Score=28.03 Aligned_cols=23 Identities=22% Similarity=0.479 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|.|.|.....+..|+..
T Consensus 9 ~~~C~--~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCH--ICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECS--SSCCEESSHHHHHHHHTT
T ss_pred CeECC--CCCCccCCHHHHHHHHHH
Confidence 58998 499999999999999876
No 46
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=63.07 E-value=3 Score=25.95 Aligned_cols=25 Identities=28% Similarity=0.529 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h~ 26 (29)
T 2m0e_A 2 EHKCP--HCDKKFNQVGNLKAHLKIHI 26 (29)
T ss_dssp CCCCS--SCCCCCCTTTHHHHHHHHHH
T ss_pred CCcCC--CCCcccCCHHHHHHHHHHhc
Confidence 37897 59999999999999987643
No 47
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=63.06 E-value=3.1 Score=26.37 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=20.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|.....+..|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 3 PYRCP--LCRAGCPSLASMQAHMRG 25 (27)
T ss_dssp TEEET--TTTEEESCHHHHHHHHTT
T ss_pred CcCCC--CCCcccCCHHHHHHHHHh
Confidence 47897 599999999999999864
No 48
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=62.84 E-value=3.1 Score=27.69 Aligned_cols=25 Identities=24% Similarity=0.498 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 7 ~~~C~--~C~k~f~~~~~l~~H~~~H~ 31 (35)
T 1srk_A 7 PFVCR--ICLSAFTTKANCARHLKVHT 31 (35)
T ss_dssp CEECS--SSCCEESSHHHHHHHHGGGT
T ss_pred CeeCC--CCCcccCCHHHHHHHHHHcC
Confidence 58998 49999999999999987643
No 49
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=62.73 E-value=4.6 Score=34.51 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=27.2
Q ss_pred ccccCCCCcccccc---chhHHHHHHhhhChHHHHHHH
Q 004439 530 KYGCGAKGCTKLFH---AAEFVHKHLKLKHPELVIELT 564 (753)
Q Consensus 530 K~rC~v~gCtKLFK---gpEFV~KHI~nKH~E~Veev~ 564 (753)
+..|. .|.|.++ +..=+..||+.||++.+.++.
T Consensus 29 ~a~Ck--~C~~~l~~~g~TSnL~rHL~~~H~~e~~~~~ 64 (73)
T 2ct5_A 29 KIYCR--ICMAQIAYSGNTSNLSYHLEKNHPEEFCEFV 64 (73)
T ss_dssp CCEET--TTTEECCCCSSTHHHHHHHHHSCHHHHHHHC
T ss_pred EEECC--CCCccccCCCChHhHHHHHHHHCHHHHHHHH
Confidence 77897 5999976 466789999999999887754
No 50
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=66.71 E-value=1.6 Score=27.83 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|.....+..|+..-+
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 2lvt_A 2 PCQCV--MCGKAFTQASSLIAHVRQHT 26 (29)
Confidence 36787 59999999999999987543
No 51
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=62.60 E-value=4.6 Score=32.77 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=23.1
Q ss_pred cccCCCCccccccchhHHHHHHhhhCh
Q 004439 531 YGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 531 ~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
+.|.-..|+|.|..++.+.+||.+.|-
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv 28 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHV 28 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhcc
Confidence 467777899999999999999987774
No 52
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=62.35 E-value=3.9 Score=25.59 Aligned_cols=23 Identities=22% Similarity=0.469 Sum_probs=20.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+.+|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCS--LCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECS--SSSCEESSHHHHHHHHHH
T ss_pred CccCC--CcChhhCCHHHHHHHHHH
Confidence 47897 599999999999999864
No 53
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=62.34 E-value=4.8 Score=26.99 Aligned_cols=24 Identities=33% Similarity=0.800 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 2 p~~C~--~C~k~F~~~~~L~~H~~~H 25 (33)
T 1rim_A 2 KFACP--ECPKRFMRSDHLSKHITLH 25 (33)
T ss_dssp CCCCS--SSCCCCSSHHHHHHHHHHH
T ss_pred cccCC--CCCchhCCHHHHHHHHHHh
Confidence 37897 5999999999999998753
No 54
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=62.33 E-value=2.6 Score=30.74 Aligned_cols=26 Identities=27% Similarity=0.579 Sum_probs=22.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|.+..|+|.|....-+..|+..-
T Consensus 18 ~~~C~~~~C~k~F~~~~~L~~H~~~H 43 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRRYNIRSHIQTH 43 (47)
T ss_dssp EEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred CeECCCCCCCCccCCHHHHHHHHHHc
Confidence 68997557999999999999998763
No 55
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.96 E-value=4.5 Score=34.02 Aligned_cols=36 Identities=17% Similarity=0.328 Sum_probs=27.2
Q ss_pred hHHHhhhhcccCcccccCCCCcccccc-chhHHHHHHhhhCh
Q 004439 517 PFVRKIRDEKYGWKYGCGAKGCTKLFH-AAEFVHKHLKLKHP 557 (753)
Q Consensus 517 ~fVkk~~DEk~g~K~rC~v~gCtKLFK-gpEFV~KHI~nKH~ 557 (753)
.+.+..+.++ .|.|. .|+|.|. ...-+..|++.-|.
T Consensus 14 ~h~~~h~~~~---~~~C~--~C~k~f~~~~~~L~~H~~~h~~ 50 (98)
T 2gqj_A 14 QWQRAIHERG---EAVCP--TCNVVTRKTLVGLKKHMEVCQK 50 (98)
T ss_dssp HHHHTTTTTS---CCCCT--TTCCCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHhccCC---CcCCC--CCCCChhhhHHHHHHHHHHHcC
Confidence 3444444553 79998 5999999 99999999977554
No 56
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=61.88 E-value=3.9 Score=32.17 Aligned_cols=28 Identities=25% Similarity=0.674 Sum_probs=25.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|....|+|.|....-+..|+...|.
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 34 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHI 34 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGG
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhC
Confidence 6899888899999999999999987775
No 57
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=61.79 E-value=7.3 Score=31.81 Aligned_cols=35 Identities=29% Similarity=0.606 Sum_probs=25.5
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
|..+++....++ .|.|.+ |+|.|....-+.+|++.
T Consensus 63 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~ 97 (100)
T 2ebt_A 63 LTRHYRKHTGAK---PFQCGV--CNRSFSRSDHLALHMKR 97 (100)
T ss_dssp HHHHHHHHTSCC---SCBCSS--SCCBCSSHHHHHHHHHH
T ss_pred HHHHHHHhCCCC---CeECCC--CcCccCCHHHHHHHHHH
Confidence 334555444453 689984 99999999999999875
No 58
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.38 E-value=3 Score=28.04 Aligned_cols=25 Identities=24% Similarity=0.620 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 9 ~~~C~--~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2els_A 9 IFTCE--YCNKVFKFKHSLQAHLRIHT 33 (36)
T ss_dssp CEECT--TTCCEESSHHHHHHHHHHHC
T ss_pred CEECC--CCCceeCCHHHHHHHHHHhC
Confidence 68998 59999999999999987633
No 59
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=61.22 E-value=6.4 Score=30.58 Aligned_cols=35 Identities=20% Similarity=0.542 Sum_probs=22.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
|..+++....++ .|.|.+ |+|.|....-+..|++.
T Consensus 37 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 37 LTRHIRIHTGQK---PFQCRI--CMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp HHHHHHHHHCCC---CEECTT--TCCEESCHHHHHHHHTT
T ss_pred HHHHHHhhCCCC---CeECCC--CCchhCCHHHHHHHHHh
Confidence 334544444442 577874 88888888888888754
No 60
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=64.95 E-value=1.8 Score=27.47 Aligned_cols=26 Identities=19% Similarity=0.551 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~h~~ 28 (30)
T 2lvr_A 3 PYVCI--HCQRQFADPGALQRHVRIHTG 28 (30)
Confidence 47897 599999999999999876443
No 61
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=60.46 E-value=4.3 Score=25.43 Aligned_cols=23 Identities=26% Similarity=0.626 Sum_probs=20.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCS--VCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECS--SSCCEESCHHHHHHHHTT
T ss_pred CccCC--CCCcccCCHHHHHHHHHh
Confidence 47897 599999999999999875
No 62
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=60.10 E-value=2.8 Score=26.21 Aligned_cols=23 Identities=26% Similarity=0.654 Sum_probs=19.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCR--ECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECT--TTSCEESCHHHHHHHHHH
T ss_pred CccCC--CCCCccCChhHHHHHHHH
Confidence 37897 499999999999999876
No 63
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.02 E-value=5.5 Score=28.25 Aligned_cols=26 Identities=27% Similarity=0.523 Sum_probs=22.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|. .|+|.|....-+..|+...|.
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~~H~ 37 (47)
T 2epx_A 12 PYECI--ECGKAFIQNTSLIRHWRYYHT 37 (47)
T ss_dssp SBCCS--SSCCCBSSHHHHHHHHTTTTT
T ss_pred CEECC--ccCchhCChHHHHHHhHhhcC
Confidence 58998 499999999999999985554
No 64
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=59.99 E-value=7.8 Score=30.31 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=23.5
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
|..+++....++ .|.|.+ |+|.|....-+.+|++.-
T Consensus 45 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 45 MKKHTFIHTGEK---PHKCQV--CGKAFSQSSNLITHSRKH 80 (82)
T ss_dssp HHHHHHHHHTCC---CEECTT--TSCEESSHHHHHHHHHHH
T ss_pred HHHHHHHhcCCC---CCcCCC--cchhhCChHHHHHHHHhh
Confidence 344554444442 578874 888888888888887653
No 65
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.87 E-value=4.5 Score=28.69 Aligned_cols=25 Identities=28% Similarity=0.638 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep1_A 12 PYECS--DCGKSFIKKSQLHVHQRIHT 36 (46)
T ss_dssp SSCCS--SSCCCCSSHHHHHHHHGGGS
T ss_pred CcCCC--CCCchhCCHHHHHHHHHHhC
Confidence 68998 59999999999999998643
No 66
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=59.82 E-value=3.5 Score=30.74 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=26.0
Q ss_pred HHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 004439 518 FVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 518 fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
+.+..+.|+ .|.|. .|+|.|....-+..|+..-+.
T Consensus 15 h~~~H~~~k---~~~C~--~C~k~f~~~~~L~~H~~~H~~ 49 (54)
T 1yui_A 15 PRSRSQSEQ---PATCP--ICYAVIRQSRNLRRHLELRHF 49 (54)
T ss_dssp CHHHHTSSC---CEECT--TTCCEESSHHHHHHHHHHHTT
T ss_pred HHHhcCCCC---CccCC--CCCcccCCHHHHHHHHHHhcc
Confidence 444444453 68998 599999999999999976443
No 67
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=59.79 E-value=5.2 Score=33.28 Aligned_cols=39 Identities=23% Similarity=0.310 Sum_probs=26.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++....++ .|.|.+ |.|.|....-+.+|++.-+.+
T Consensus 61 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 61 LRDHRYIHSKEK---PFKCQE--CGKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp HHHHGGGSCCCC---TTSCSS--SCCCCSSHHHHHHHHHHTTSC
T ss_pred HHHHHHHhCCCC---CeECCC--cCCcccCHHHHHHHHHHhCCC
Confidence 334444443442 589984 999999999999998765543
No 68
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.75 E-value=4 Score=29.22 Aligned_cols=25 Identities=24% Similarity=0.490 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|.|.|....-+..|++.-+
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eom_A 12 GHRCS--DCGKFFLQASNFIQHRRIHT 36 (46)
T ss_dssp SCCCS--SSCCCCSSHHHHHHHHHHHS
T ss_pred CcCCC--CCCCeeCChHHHHHHHHHhC
Confidence 68998 59999999999999987643
No 69
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=59.63 E-value=6.6 Score=30.88 Aligned_cols=25 Identities=32% Similarity=0.693 Sum_probs=16.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|...+|+|.|....-+..|+..
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~ 55 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKV 55 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHH
Confidence 4677644577777777777777654
No 70
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.55 E-value=3.4 Score=27.56 Aligned_cols=24 Identities=21% Similarity=0.408 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|.|.|....-+..|+..-
T Consensus 9 ~~~C~--~C~k~f~~~~~l~~H~~~H 32 (36)
T 2elt_A 9 PYKCP--QCSYASAIKANLNVHLRKH 32 (36)
T ss_dssp SEECS--SSSCEESSHHHHHHHHHHH
T ss_pred CCCCC--CCCcccCCHHHHHHHHHHc
Confidence 58998 5999999999999998753
No 71
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.32 E-value=4.1 Score=28.52 Aligned_cols=23 Identities=26% Similarity=0.658 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (44)
T 2en7_A 12 PYVCNE--CGKAFRSKSYLIIHTRT 34 (44)
T ss_dssp SSCCTT--TCCCCSSHHHHHHHHTT
T ss_pred CeECCC--CCCccCCHHHHHHHhhh
Confidence 589984 99999999999999975
No 72
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.23 E-value=3.9 Score=27.43 Aligned_cols=24 Identities=13% Similarity=0.351 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|.|.|....-+..|+..-
T Consensus 9 ~~~C~--~C~k~f~~~~~l~~H~~~H 32 (36)
T 2elq_A 9 PFKCS--LCEYATRSKSNLKAHMNRH 32 (36)
T ss_dssp SEECS--SSSCEESCHHHHHHHHHHS
T ss_pred CccCC--CCCchhCCHHHHHHHHHHh
Confidence 58998 5999999999999998763
No 73
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=59.20 E-value=3.7 Score=32.02 Aligned_cols=28 Identities=18% Similarity=0.422 Sum_probs=24.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|...+|.|.|+....+..|+..-+.
T Consensus 17 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 44 (72)
T 2epa_A 17 SHICSHPGCGKTYFKSSHLKAHTRTHTG 44 (72)
T ss_dssp CEECSSTTTCCEESSHHHHHHHHHHHSS
T ss_pred ceeCCCCCCccccCCHHHHHHHHHhcCC
Confidence 7899877899999999999999976443
No 74
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=59.09 E-value=6.8 Score=31.99 Aligned_cols=41 Identities=24% Similarity=0.460 Sum_probs=28.9
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|..+++....++ .|.|.+..|.|.|....-+..|+..-+.
T Consensus 32 ~l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 32 HLKAHLRTHTGEK---PYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp HHHHHHHHHSCCC---CEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCCCC---CeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 3444555544443 6899755699999999999999876544
No 75
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=58.92 E-value=5.7 Score=33.37 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=28.0
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++ .+.|+ .|.|.+ |.|.|....-+.+|++..|..
T Consensus 58 l~~H~~-H~~~~---~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 95 (107)
T 1wjp_A 58 KQEHES-KCEYK---KLTCLE--CMRTFKSSFSIWRHQVEVHNQ 95 (107)
T ss_dssp HHHHHH-HCSTG---GGEEGG--GTEECSSHHHHHHHHHHTSCC
T ss_pred HHHHHH-cCCCC---CccCcc--ccchhCCHHHHHHHHHHHcCC
Confidence 334543 44453 689984 999999999999999877753
No 76
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=58.45 E-value=6.8 Score=31.26 Aligned_cols=38 Identities=29% Similarity=0.463 Sum_probs=30.1
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|..+++..+.|+ .|.|. .|+|.|....-+.+|++. |.
T Consensus 19 ~L~~H~~~Ht~ek---p~~C~--~C~k~F~~~~~L~~H~~~-Ht 56 (60)
T 4gzn_C 19 GLSRHRRAHLGYR---PRSCP--ECGKCFRDQSEVNRHLKV-HQ 56 (60)
T ss_dssp HHHHHHHHHHTCC---CEECT--TTCCEESSHHHHHHHGGG-GS
T ss_pred HHHHHHHHhCCCc---CeECC--CCCCCcCCHHHHHHHhCc-cC
Confidence 3555777667775 69998 599999999999999875 54
No 77
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.38 E-value=4 Score=29.07 Aligned_cols=25 Identities=24% Similarity=0.595 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|++.-+
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emi_A 12 HYECS--ECGKAFIQKSTLSMHQRIHR 36 (46)
T ss_dssp CEECS--SSCCEESSHHHHHHHHGGGC
T ss_pred CCCCC--CCCcccCCHHHHHHHHhHhC
Confidence 68998 49999999999999987643
No 78
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=58.02 E-value=6.5 Score=31.17 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=22.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|.+ |.|.|....-+.+|++..|.+
T Consensus 47 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 47 AFVCSK--CGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSS--SCCEESCHHHHHHHHHHCCCC
T ss_pred ceECCC--CCChhCCHHHHHHHHHHccCC
Confidence 588974 999999999999999877665
No 79
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=57.92 E-value=4.1 Score=32.25 Aligned_cols=27 Identities=30% Similarity=0.557 Sum_probs=24.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|.+ |.|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 15 PYECYI--CHARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp SEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred CeECCC--cCchhCCHHHHHHHHHHhcCC
Confidence 699984 999999999999999988864
No 80
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.35 E-value=4.7 Score=28.68 Aligned_cols=24 Identities=25% Similarity=0.653 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq2_A 12 PYQCN--ECGKAFSQTSKLARHQRVH 35 (46)
T ss_dssp SSSCC--SSCCCCSSHHHHHHHGGGG
T ss_pred CeECC--CCCcccCCHHHHHHHHHHc
Confidence 68998 4999999999999998763
No 81
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.29 E-value=2.9 Score=35.50 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=28.5
Q ss_pred hhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 516 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 516 e~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
..+++..+.|+ .|.|. .|+|.|....-+.+|++..|..
T Consensus 69 ~~H~~~H~~~~---~~~C~--~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 69 LEMEGKEDAQK---VLKCM--YCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp CCCCCSCCCCS---SCBCS--SSCCBCSSHHHHHHHHHHTTTT
T ss_pred HHHhhccCCCc---ceECC--CCCCccCCHHHHHHHHHHhCCc
Confidence 33444434443 68998 4999999999999999987764
No 82
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=57.23 E-value=4 Score=36.35 Aligned_cols=42 Identities=24% Similarity=0.476 Sum_probs=30.5
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++....++ .|.|.+.+|+|.|....-+.+|++.-|.|
T Consensus 107 ~L~~H~~~h~~~~---~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 148 (155)
T 2rpc_A 107 NLKIHKRTHTGEK---PFKCEFEGCDRRFANSSDRKKHMHVHTSD 148 (155)
T ss_dssp HHHHHHTTTCSSC---SBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred HHHHHHHhhCCCC---CccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 3445655544442 68998667999999999999999865554
No 83
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.99 E-value=4.7 Score=28.69 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emg_A 12 PFICS--ECGKVFTHKTNLIIHQKIH 35 (46)
T ss_dssp SCBCT--TTCCBCSSHHHHHHHHTTT
T ss_pred CEECC--ccCcccCCHHHHHHHHHHh
Confidence 58998 4999999999999998763
No 84
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.91 E-value=4.6 Score=28.73 Aligned_cols=24 Identities=29% Similarity=0.606 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq1_A 12 PYKCN--ECGKAFRAHSNLTTHQVIH 35 (46)
T ss_dssp CCCCT--TTTCCCSSHHHHHHHHTTT
T ss_pred CeECC--cCChhhCCHHHHHHHHHHh
Confidence 68998 4999999999999998753
No 85
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.76 E-value=3.8 Score=28.41 Aligned_cols=24 Identities=25% Similarity=0.537 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|.....+..|+..-
T Consensus 10 ~~~C~--~C~k~f~~~~~L~~H~~~H 33 (41)
T 2ept_A 10 VYECQ--ECGKSFRQKGSLTLHERIH 33 (41)
T ss_dssp CEECS--SSCCEESSHHHHHHHGGGC
T ss_pred CeECC--CCCCCcCCHHHHHHHHHHh
Confidence 58998 5999999999999998753
No 86
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=56.73 E-value=6.2 Score=32.00 Aligned_cols=39 Identities=21% Similarity=0.369 Sum_probs=28.8
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++....++ .|.|.+ |.|.|....-+.+|+...|.+
T Consensus 23 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 23 LNRHKLSHSGEK---PYSCPV--CGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp HHHHHHHSCSSC---SEECSS--SCCEESCHHHHHHHHHHHCCC
T ss_pred HHHHHHhcCCCC---CCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 444555544442 689984 999999999999999876654
No 87
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.48 E-value=5.9 Score=27.98 Aligned_cols=26 Identities=19% Similarity=0.433 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|. .|+|.|.....+..|+..-+.
T Consensus 10 ~~~C~--~C~k~f~~~~~L~~H~~~H~~ 35 (43)
T 2yrm_A 10 AFFCN--ECDCRFSEEASLKRHTLQTHS 35 (43)
T ss_dssp CBCCS--SSCCCBSSHHHHHHHHHHHTC
T ss_pred CEECC--CCCCeeCChHHHHHHHHhhCC
Confidence 58998 599999999999999876433
No 88
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.43 E-value=3.5 Score=29.33 Aligned_cols=24 Identities=25% Similarity=0.569 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|.+ |.|.|....-+.+|++.-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (45)
T 2epu_A 12 PFECTH--CGKSFRAKGNLVTHQRIH 35 (45)
T ss_dssp SEEETT--TTEEESSHHHHHHHHTTT
T ss_pred CccCCC--CCCccCChHHHHHHHHHh
Confidence 689984 999999999999998763
No 89
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.19 E-value=5.1 Score=28.57 Aligned_cols=24 Identities=21% Similarity=0.592 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|.+ |.|.|.....+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2en9_A 12 LFKCNE--CKKTFTQSSSLTVHQRIH 35 (46)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHH
T ss_pred CEECCc--cCcccCCHHHHHHHHHHc
Confidence 689984 999999999999998753
No 90
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.16 E-value=3.6 Score=29.38 Aligned_cols=26 Identities=27% Similarity=0.717 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|.+ |+|.|....-+.+|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eoz_A 12 PYSCNV--CGKAFVLSAHLNQHLRVHTQ 37 (46)
T ss_dssp SEEETT--TTEEESSHHHHHHHHHHHSS
T ss_pred CeECcc--cChhhCCHHHHHHHHHHhCC
Confidence 689984 99999999999999876443
No 91
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.72 E-value=5.6 Score=28.27 Aligned_cols=24 Identities=25% Similarity=0.660 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H 35 (46)
T 2enf_A 12 PYKCN--ECGKVFTQNSHLVRHRGIH 35 (46)
T ss_dssp SCBCS--SSCCBCSSHHHHHHHHTTT
T ss_pred CeECC--CCCcccCCHHHHHHHHHhh
Confidence 68998 4999999999999998753
No 92
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.59 E-value=5 Score=28.63 Aligned_cols=23 Identities=26% Similarity=0.652 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|.|.|.....+.+|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoh_A 12 PYECK--ECRKTFIQIGHLNQHKRV 34 (46)
T ss_dssp SCCCS--SSCCCCSSHHHHHHHHHH
T ss_pred CcCCC--CcCchhCCHHHHHHHHHH
Confidence 58998 499999999999999875
No 93
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.55 E-value=4.8 Score=28.71 Aligned_cols=23 Identities=26% Similarity=0.613 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|.|.|....-+..|++.
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~ 34 (46)
T 2enh_A 12 PYECD--VCRKAFSHHASLTQHQRV 34 (46)
T ss_dssp SCBCT--TTCCBCSSSHHHHHHGGG
T ss_pred CcCCC--CcCchhCCHHHHHHHHHH
Confidence 68998 499999999999999876
No 94
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=55.47 E-value=8.8 Score=31.84 Aligned_cols=39 Identities=28% Similarity=0.506 Sum_probs=28.4
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++....++ .|.|.+ |.|.|....-+..|+...+.+
T Consensus 33 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 71 (106)
T 2ee8_A 33 LLIHERTHTDER---PYTCDI--CHKAFRRQDHLRDHRYIHSKE 71 (106)
T ss_dssp HHHHHHHHCCSC---CCBCSS--SCCBCSCHHHHHHHGGGSCCC
T ss_pred HHHHHHHcCCCC---CcCCCC--ccchhCCHHHHHHHHHHhCCC
Confidence 344555544442 689985 999999999999998765543
No 95
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.44 E-value=5.9 Score=28.23 Aligned_cols=24 Identities=25% Similarity=0.674 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yth_A 12 PFQCE--ECGKRFTQNSHLHSHQRVH 35 (46)
T ss_dssp SBCCS--SSCCCBSSHHHHHHHGGGG
T ss_pred CCCCC--CCCcccCCHHHHHHHHHhc
Confidence 58998 4999999999999998763
No 96
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=55.35 E-value=7.5 Score=30.42 Aligned_cols=38 Identities=26% Similarity=0.427 Sum_probs=28.0
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
|..+++....++ .|.|.+ |+|.|....-+..|+...+.
T Consensus 17 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 17 LSTHLLIHSDTR---PYPCQY--CGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp HHHHHHHHHTCC---CEECSS--SCCEESSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCC---CeeCCc--CChhhCCHHHHHHHHHHhcC
Confidence 444555544442 689984 99999999999999986544
No 97
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=55.21 E-value=6.3 Score=32.03 Aligned_cols=40 Identities=25% Similarity=0.420 Sum_probs=28.5
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++....++ .|.|. .|.|.|....-+.+|+...+.+
T Consensus 23 ~l~~H~~~h~~~~---~~~C~--~C~~~f~~~~~l~~H~~~h~~~ 62 (96)
T 2dmd_A 23 KLKTHMRCHTGVK---PYKCK--TCDYAAADSSSLNKHLRIHSDE 62 (96)
T ss_dssp HHHHHGGGCCCCC---SEECS--SSCCEESSHHHHHHHHHHSCCC
T ss_pred HHHHHHHhcCCCC---CEeCC--CCCCccCCHHHHHHHHHHhCCC
Confidence 3445655544442 68997 4999999999999999865543
No 98
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.20 E-value=5.6 Score=28.18 Aligned_cols=24 Identities=25% Similarity=0.665 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytr_A 12 PYKCN--ECGKAFSQTSKLARHQRIH 35 (46)
T ss_dssp TTCCT--TTCCCCSSHHHHHHHHTTT
T ss_pred CcCCC--CCCCccCCHHHHHHHHHhc
Confidence 68998 4999999999999998763
No 99
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=55.09 E-value=7.4 Score=32.64 Aligned_cols=40 Identities=25% Similarity=0.473 Sum_probs=29.9
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++....++ .|.|.+ |.|.|....-+..|+..-|.+
T Consensus 24 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 63 (110)
T 2csh_A 24 QRDRHMSMHLGLR---PYGCGV--CGKKFKMKHHLVGHMKIHTGI 63 (110)
T ss_dssp HHHHHHHHHSCCC---SEECTT--TSCEESSSHHHHHHHTTTCCC
T ss_pred HHHHHHHHcCCCc---CccCCC--CCcccCCHHHHHHHHHHcCCC
Confidence 3455666554443 699984 999999999999999876544
No 100
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.87 E-value=4.3 Score=28.96 Aligned_cols=24 Identities=25% Similarity=0.598 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|.....+..|+..-
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H 35 (46)
T 2ytp_A 12 HYECS--ECGKAFARKSTLIMHQRIH 35 (46)
T ss_dssp CEECS--SSCCEESSHHHHHHHHTTT
T ss_pred CeECC--cCCcccCCHHHHHHHHHHh
Confidence 68998 5999999999999998763
No 101
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.85 E-value=5.7 Score=28.20 Aligned_cols=24 Identities=21% Similarity=0.505 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2epz_A 12 PFDCI--DCGKAFSDHIGLNQHRRIH 35 (46)
T ss_dssp SBCCT--TTCCCBSSHHHHHHHHTTT
T ss_pred CeECC--CCCceeCCHHHHHHHHHHh
Confidence 68998 4999999999999999753
No 102
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.82 E-value=5.1 Score=28.37 Aligned_cols=25 Identities=24% Similarity=0.470 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|.|.|....-+.+|+..-+
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2epv_A 12 PYECN--ECGKAFIWKSLLIVHERTHA 36 (44)
T ss_dssp SEECS--SSCCEESSHHHHHHHHGGGS
T ss_pred CeECC--CCCcccCchHHHHHHHhHhc
Confidence 58998 49999999999999987633
No 103
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.77 E-value=5.7 Score=28.11 Aligned_cols=23 Identities=22% Similarity=0.407 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eop_A 12 PHECRE--CGKSFSFNSQLIVHQRI 34 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHTT
T ss_pred CeeCCC--CCchhCCHHHHHHHHHH
Confidence 689984 99999999999999876
No 104
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=54.74 E-value=4.9 Score=27.89 Aligned_cols=25 Identities=24% Similarity=0.567 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 10 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 34 (42)
T 2el5_A 10 PYECS--ECGKAFNRKDQLISHQRTHA 34 (42)
T ss_dssp SEECS--SSCCEESSHHHHHHHHGGGC
T ss_pred CccCC--CcChhhCCHHHHHHHHHhcC
Confidence 58998 59999999999999997643
No 105
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.40 E-value=4.8 Score=28.63 Aligned_cols=24 Identities=29% Similarity=0.632 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep3_A 12 PYRCA--ECGKAFTDRSNLFTHQKIH 35 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHTTT
T ss_pred CeECC--CCCchhCCHHHHHHHHHHc
Confidence 68998 4999999999999999763
No 106
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.30 E-value=4.6 Score=28.60 Aligned_cols=25 Identities=20% Similarity=0.505 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytf_A 12 PFECS--ECQKAFNTKSNLIVHQRTHT 36 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHHTSC
T ss_pred CcCCC--CCCcccCCHHHHHHHHHHhC
Confidence 68998 49999999999999987633
No 107
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=54.30 E-value=5.7 Score=28.29 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+.+|+..-
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emk_A 12 PYECK--ECGKAFSQTTHLIQHQRVH 35 (46)
T ss_dssp SCBCS--SSCCBCSCHHHHHHHHHHH
T ss_pred ceECC--CCCchhCCHHHHHHHHHHc
Confidence 58998 4999999999999999763
No 108
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.24 E-value=5.9 Score=27.39 Aligned_cols=23 Identities=26% Similarity=0.665 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 10 ~~~C~--~C~k~f~~~~~L~~H~~~ 32 (42)
T 2yte_A 10 PYSCA--ECKETFSDNNRLVQHQKM 32 (42)
T ss_dssp SCBCT--TTCCBCSSHHHHHHHHHH
T ss_pred CeECC--CCCCccCCHHHHHHHHHH
Confidence 58998 599999999999999876
No 109
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.15 E-value=5.6 Score=28.17 Aligned_cols=24 Identities=38% Similarity=0.668 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq4_A 12 LYNCK--ECGKSFSRAPCLLKHERLH 35 (46)
T ss_dssp CCCBT--TTTBCCSCHHHHHHHHHHC
T ss_pred CeECC--CCCCccCchHHHHHHHHhc
Confidence 68998 4999999999999998763
No 110
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.99 E-value=4.6 Score=28.60 Aligned_cols=24 Identities=29% Similarity=0.721 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yrj_A 12 PYRCG--ECGKAFAQKANLTQHQRIH 35 (46)
T ss_dssp CEECS--SSCCEESSHHHHHHHHTTT
T ss_pred CeECC--CCCCccCCHHHHHHHHHHc
Confidence 68998 4999999999999998753
No 111
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.80 E-value=5.8 Score=28.25 Aligned_cols=23 Identities=26% Similarity=0.621 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em6_A 12 CYKCD--VCGKEFSQSSHLQTHQRV 34 (46)
T ss_dssp CCBCS--SSCCBCSSHHHHHHHHTT
T ss_pred CeECC--CCCcccCCHHHHHHHHHH
Confidence 58998 499999999999999875
No 112
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.80 E-value=5.2 Score=27.84 Aligned_cols=25 Identities=24% Similarity=0.580 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 11 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2eos_A 11 PYPCE--ICGTRFRHLQTLKSHLRIHT 35 (42)
T ss_dssp CBCCS--SSCCCBSSHHHHHHHTTTTS
T ss_pred CEECC--CCCCccCCHHHHHHHHHhcC
Confidence 58998 59999999999999987643
No 113
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=53.74 E-value=7.9 Score=35.08 Aligned_cols=39 Identities=26% Similarity=0.469 Sum_probs=30.5
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
|..+++..+.|+ .|.|. .|+|.|.....+.+|+++-|.+
T Consensus 66 L~~H~~~H~~~k---~~~C~--~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 66 RTKHEIHHTGER---RYQCL--ACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp HHHHHHHHHTCC---CEEES--SSCCEESSHHHHHHHHHHHTCC
T ss_pred hhhhccccCCCc---cccCC--CCCCCcCCHHHHHHHhHHhcCC
Confidence 444555555563 58998 4999999999999999998875
No 114
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.62 E-value=6 Score=27.98 Aligned_cols=25 Identities=28% Similarity=0.481 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+.+|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eov_A 12 PYKCS--DCGKSFTWKSRLRIHQKCHT 36 (46)
T ss_dssp SCBCS--SSCCBCSSHHHHHHHHHHHS
T ss_pred CccCC--ccChhhCCHHHHHHHHHhcC
Confidence 58998 49999999999999987533
No 115
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.60 E-value=4.9 Score=28.68 Aligned_cols=23 Identities=26% Similarity=0.525 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|++.
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytt_A 12 PYQCS--ECGKSFSGSYRLTQHWIT 34 (46)
T ss_dssp TTCCS--SSCCCCSSHHHHHHHHTH
T ss_pred CeeCC--CCCcccCCHHHHHHHHHH
Confidence 68998 499999999999999876
No 116
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.50 E-value=5.1 Score=28.58 Aligned_cols=25 Identities=24% Similarity=0.424 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|.....+..|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em4_A 12 PYECI--ECGKAFKTKSSLICHRRSHT 36 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHHHHS
T ss_pred CcCCC--CCCCccCCHHHHHHHHHhcC
Confidence 58998 49999999999999987633
No 117
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=53.15 E-value=5 Score=27.58 Aligned_cols=25 Identities=24% Similarity=0.632 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 6 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 30 (39)
T 1njq_A 6 SYTCS--FCKREFRSAQALGGHMNVHR 30 (39)
T ss_dssp SEECT--TTCCEESSHHHHHHHHHTTC
T ss_pred ceECC--CCCcccCCHHHHHHHHHHcC
Confidence 58998 49999999999999987633
No 118
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.94 E-value=4.9 Score=28.56 Aligned_cols=25 Identities=28% Similarity=0.627 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2em3_A 12 PYECKV--CSKAFTQKAHLAQHQKTHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhC
Confidence 689984 9999999999999997633
No 119
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=52.89 E-value=8.3 Score=32.40 Aligned_cols=35 Identities=20% Similarity=0.494 Sum_probs=20.6
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
|..+++....++ .|.|. .|+|.|....-+..|+..
T Consensus 54 l~~H~~~h~~~~---~~~C~--~C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 54 LKRHQRRHTGVK---PFQCK--TCQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp HHHHHHHHHCCC---CEECT--TTCCEESCHHHHHHHHHH
T ss_pred HHHHHHHcCCCC---CccCC--ccCchhCCHHHHHHHHHH
Confidence 444555443332 46776 377777777777777654
No 120
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=52.77 E-value=6.8 Score=29.24 Aligned_cols=26 Identities=31% Similarity=0.623 Sum_probs=22.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|. .|.|.|....-+..|++..|.
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~~H~ 37 (54)
T 2eps_A 12 PYICQ--SCGKGFSRPDHLNGHIKQVHT 37 (54)
T ss_dssp CEECS--SSCCEESSHHHHHHHHHHTSC
T ss_pred CeECC--CCCcccCCHHHHHHHHHHhcC
Confidence 68998 499999999999999986664
No 121
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.75 E-value=6.5 Score=27.71 Aligned_cols=24 Identities=25% Similarity=0.598 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|.....+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (44)
T 2eou_A 12 TSECQ--ECGKIFRHSSLLIEHQALH 35 (44)
T ss_dssp CCCCT--TTCCCCSSHHHHHHHHHHH
T ss_pred CeECC--CCCcccCCHHHHHHHHHHH
Confidence 58998 5999999999999998763
No 122
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.60 E-value=5.3 Score=28.55 Aligned_cols=23 Identities=26% Similarity=0.657 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |.|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eon_A 12 PYKCQV--CGKAFRVSSHLVQHHSV 34 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHTTT
T ss_pred ccCCCC--CCcccCcHHHHHHHHHh
Confidence 689984 99999999999999875
No 123
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=52.52 E-value=5.1 Score=27.72 Aligned_cols=24 Identities=29% Similarity=0.490 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 11 ~~~C~--~C~k~f~~~~~l~~H~~~H 34 (42)
T 2epc_A 11 PYLCG--QCGKSFTQRGSLAVHQRSC 34 (42)
T ss_dssp CEECS--SSCCEESSHHHHHHHHHHT
T ss_pred CeECC--CCCcccCCHHHHHHHhhhc
Confidence 58998 4999999999999998753
No 124
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.38 E-value=5.7 Score=27.76 Aligned_cols=23 Identities=26% Similarity=0.596 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eof_A 12 PYECN--ECQKAFNTKSNLMVHQRT 34 (44)
T ss_dssp SEECT--TTCCEESCHHHHHHHHHH
T ss_pred CeECC--CCCcccCCHhHHHHHHHH
Confidence 58998 499999999999999976
No 125
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.35 E-value=5.8 Score=28.19 Aligned_cols=25 Identities=24% Similarity=0.604 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|.+ |+|.|....-+.+|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eml_A 12 PYECSV--CGKAFSHRQSLSVHQRIHS 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGS
T ss_pred CeeCCC--cCCccCCHHHHHHHHHHhc
Confidence 689984 9999999999999997633
No 126
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=52.32 E-value=11 Score=30.00 Aligned_cols=35 Identities=23% Similarity=0.525 Sum_probs=24.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
|..+++....++ .|.|. .|+|.|....-+.+|++.
T Consensus 53 l~~H~~~h~~~~---~~~C~--~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 53 LTRHYRKHTGHR---PFQCQ--KCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp HHHHHHHHHCCC---CEECS--SSSCEESSHHHHHHHGGG
T ss_pred HHHHHHHcCCCC---CccCC--CCCcccCCHHHHHHHHHh
Confidence 344554444442 58887 499999998888888864
No 127
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.30 E-value=6.2 Score=28.11 Aligned_cols=23 Identities=30% Similarity=0.837 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytq_A 12 PYGCS--ECGKAFSSKSYLIIHMRT 34 (46)
T ss_dssp SCBCS--SSCCBCSCHHHHHHHHTT
T ss_pred CcCCC--ccChhhCChHHHHHHHHH
Confidence 68998 499999999999999876
No 128
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.25 E-value=6.2 Score=28.03 Aligned_cols=23 Identities=26% Similarity=0.697 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~ 34 (46)
T 2yti_A 12 PYKCN--ECGKVFTQNSHLARHRGI 34 (46)
T ss_dssp TTCCS--SSCCCCSSHHHHHHHHTT
T ss_pred CeECC--CCCcccCChhHHHHHhHh
Confidence 68998 499999999999999875
No 129
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.12 E-value=4.5 Score=28.65 Aligned_cols=23 Identities=26% Similarity=0.606 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+.+|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq3_A 12 PYECN--QCGKAFSVRSSLTTHQAI 34 (46)
T ss_dssp SSEET--TTTEECSSHHHHHHHHTT
T ss_pred CeECC--CCChhhCCHHHHHHHHHH
Confidence 68998 499999999999999875
No 130
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.90 E-value=5.4 Score=28.25 Aligned_cols=24 Identities=29% Similarity=0.537 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eow_A 12 PYKCN--ECGKAFRARSSLAIHQATH 35 (46)
T ss_dssp CEECT--TSCCEESSHHHHHHHHHHH
T ss_pred Ceecc--ccCChhcCHHHHHHHHHHc
Confidence 58998 4999999999999998763
No 131
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=51.90 E-value=7 Score=27.73 Aligned_cols=23 Identities=22% Similarity=0.509 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+.+|+..
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~ 34 (46)
T 2em0_A 12 TWKCR--ECDMCFSQASSLRLHQNV 34 (46)
T ss_dssp CCCCS--SSCCCCSSHHHHHHHGGG
T ss_pred CeECC--CCCcccCCHHHHHHHHHH
Confidence 58998 599999999999999876
No 132
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=51.77 E-value=5.7 Score=28.30 Aligned_cols=23 Identities=22% Similarity=0.611 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emj_A 12 PFECA--ECGKSFSISSQLATHQRI 34 (46)
T ss_dssp SEECS--SSSCEESSHHHHHHHHHH
T ss_pred CEECC--CCCcccCCHHHHHHHHHH
Confidence 68998 499999999999999876
No 133
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.69 E-value=5.5 Score=28.38 Aligned_cols=24 Identities=25% Similarity=0.581 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|++.-
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emf_A 12 HFECT--ECGKAFTRKSTLSMHQKIH 35 (46)
T ss_dssp CEECS--SSCCEESCHHHHHHHGGGT
T ss_pred CeECC--CCCchhCCHHHHHHHHHHh
Confidence 68998 4999999999999999763
No 134
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.38 E-value=6.6 Score=27.86 Aligned_cols=24 Identities=25% Similarity=0.677 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H 35 (46)
T 2ytn_A 12 PYKCN--ECGKVFTQNSHLARHRGIH 35 (46)
T ss_dssp SCBCT--TTCCBCSSHHHHHHHGGGT
T ss_pred CeECC--CCCCeeCCHHHHHHHhhhc
Confidence 68998 4999999999999998753
No 135
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.33 E-value=5.5 Score=28.22 Aligned_cols=24 Identities=21% Similarity=0.499 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|.....+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emm_A 12 PHKCN--ECGKSFIQSAHLIQHQRIH 35 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHHHH
T ss_pred CeeCC--CCChhhCCHHHHHHHHHHh
Confidence 68998 4999999999999998763
No 136
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=51.32 E-value=3.9 Score=32.48 Aligned_cols=27 Identities=30% Similarity=0.684 Sum_probs=23.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|.+ |.|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~ 41 (86)
T 1x6h_A 15 PYACSH--CDKTFRQKQLLDMHFKRYHDP 41 (86)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred CCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 589984 999999999999999987764
No 137
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.12 E-value=8.6 Score=27.42 Aligned_cols=23 Identities=30% Similarity=0.586 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 12 PYKCM--ECGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp SSSBT--TTTBCCSSHHHHHHHHHH
T ss_pred CcCCC--CCCchhCCHHHHHHHHHH
Confidence 68998 499999999999999875
No 138
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.02 E-value=5.5 Score=28.39 Aligned_cols=23 Identities=30% Similarity=0.590 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+.+|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yto_A 12 PYKCS--DCGKAFTRKSGLHIHQQS 34 (46)
T ss_dssp CEECS--SSCCEESSHHHHHHHHHH
T ss_pred CEECc--ccCCccCCHhHHHHHHHH
Confidence 68998 599999999999999876
No 139
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=50.99 E-value=13 Score=29.12 Aligned_cols=26 Identities=23% Similarity=0.393 Sum_probs=22.4
Q ss_pred cccCCCC-ccccccchhHHHHHHhhhC
Q 004439 531 YGCGAKG-CTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 531 ~rC~v~g-CtKLFKgpEFV~KHI~nKH 556 (753)
|.|.... |+|.|+...-+.+|++..|
T Consensus 59 ~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 59 YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 7898544 9999999999999998765
No 140
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.96 E-value=6 Score=28.10 Aligned_cols=24 Identities=25% Similarity=0.483 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emy_A 12 PYECH--ECGKAFSRKYQLISHQRTH 35 (46)
T ss_dssp CEECS--SSCCEESSHHHHHHHHHHH
T ss_pred CcCCC--CCCcccCcHHHHHHHHHHc
Confidence 58998 4999999999999998763
No 141
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=50.96 E-value=9.2 Score=32.99 Aligned_cols=28 Identities=25% Similarity=0.491 Sum_probs=24.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
-|.|...+|+|-|.-..-+..|++..|.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHT 54 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHK 54 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence 5999877899999999999999976675
No 142
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.66 E-value=5.6 Score=28.35 Aligned_cols=23 Identities=17% Similarity=0.512 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em5_A 12 SHQCHE--CGRGFTLKSHLNQHQRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeECCc--CCCccCCHHHHHHHHHH
Confidence 689984 99999999999999876
No 143
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=50.60 E-value=13 Score=31.17 Aligned_cols=38 Identities=24% Similarity=0.465 Sum_probs=28.1
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|..+++....++ .|.|....|+|.|....-+.+|+++
T Consensus 81 ~l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 81 HLKTHTRTHTGEK---PFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp HHHHHHHHHHTCC---CEECCSTTCCCEESSHHHHHHHHHT
T ss_pred HHHHHHHHhcCCC---CeeCCCCCCccccCCHHHHHHHHhc
Confidence 3455666555553 6899544699999999999999864
No 144
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.53 E-value=6.3 Score=27.98 Aligned_cols=25 Identities=24% Similarity=0.405 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em7_A 12 PYKCE--ECGKGFICRRDLYTHHMVHT 36 (46)
T ss_dssp SEECS--SSCCEESCHHHHHHHGGGGT
T ss_pred CccCC--CccchhCCHHHHHHHHHHhC
Confidence 68998 49999999999999987633
No 145
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=50.44 E-value=8.9 Score=30.64 Aligned_cols=39 Identities=18% Similarity=0.485 Sum_probs=28.2
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|..+++....++ .|.|.+ |+|.|....-+..|+...+.
T Consensus 21 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 21 SLTRHIRIHTGQK---PFQCRI--CMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp HHHHHHHHHHCCC---CEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCC---CccCCC--CCcccCCHHHHHHHHHHcCC
Confidence 3445665544443 689984 99999999999999986443
No 146
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.36 E-value=5.9 Score=28.06 Aligned_cols=23 Identities=26% Similarity=0.647 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yts_A 12 PYICN--ECGKSFIQKSHLNRHRRI 34 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHGGG
T ss_pred CEECC--CCChhhCChHHHHHHHHh
Confidence 68998 499999999999999875
No 147
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.12 E-value=4.7 Score=27.18 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=20.1
Q ss_pred ccccCCCCccccccch-hHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAA-EFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgp-EFV~KHI~n 554 (753)
-|.|. .|.|.|... .-+..|+..
T Consensus 9 ~~~C~--~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCP--YCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECS--SSSCEECSSCHHHHHHHHH
T ss_pred CeECC--CCChhhccCHHHHHHHHHh
Confidence 58997 599999998 999999875
No 148
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.10 E-value=5.9 Score=28.14 Aligned_cols=23 Identities=26% Similarity=0.576 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|.|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep0_A 12 PYKCD--VCHKSFRYGSSLTVHQRI 34 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHTT
T ss_pred CeeCc--ccCcccCChHHHHHHHHH
Confidence 68998 499999999999999876
No 149
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.10 E-value=7 Score=27.83 Aligned_cols=23 Identities=22% Similarity=0.508 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|++.
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~ 34 (46)
T 2elz_A 12 PYKCE--DCGKGYNRRLNLDMHQRV 34 (46)
T ss_dssp SCBCS--SSCCBCSSHHHHHHHGGG
T ss_pred CeeCc--ccCchhCCHHHHHHHHHh
Confidence 68998 599999999999999875
No 150
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=49.96 E-value=5.8 Score=28.08 Aligned_cols=23 Identities=30% Similarity=0.644 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|.....+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2el4_A 12 PYGCS--QCAKTFSLKSQLIVHQRS 34 (46)
T ss_dssp SEECS--SSSCEESSHHHHHHHGGG
T ss_pred ceECC--CCCchhCCHHHHHHHHHH
Confidence 58998 499999999999999876
No 151
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.95 E-value=6.1 Score=27.79 Aligned_cols=24 Identities=25% Similarity=0.703 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|.....+..|+..-
T Consensus 10 ~~~C~--~C~k~f~~~~~L~~H~~~H 33 (44)
T 2emx_A 10 PFGCS--CCEKAFSSKSYLLVHQQTH 33 (44)
T ss_dssp CEECS--SSSCEESSHHHHHHHHHHH
T ss_pred CccCC--CCCcccCCHHHHHHHHHHh
Confidence 68998 4999999999999998763
No 152
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.84 E-value=5.7 Score=28.19 Aligned_cols=23 Identities=26% Similarity=0.849 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ene_A 12 PYKCN--ECGKVFRHNSYLSRHQRI 34 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHTT
T ss_pred CeECC--CCCchhCChHHHHHHHhh
Confidence 68998 499999999999999986
No 153
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.83 E-value=4.9 Score=27.81 Aligned_cols=24 Identities=25% Similarity=0.606 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 11 ~~~C~--~C~k~f~~~~~L~~H~~~H 34 (42)
T 2ytb_A 11 PYRCD--QCGKAFSQKGSLIVHIRVH 34 (42)
T ss_dssp SBCCT--TTTCCBSSHHHHHTTGGGT
T ss_pred CeeCC--CccchhCCHHHHHHHHHHh
Confidence 58998 4999999999999998753
No 154
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=49.73 E-value=9 Score=33.83 Aligned_cols=42 Identities=33% Similarity=0.533 Sum_probs=30.5
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++....++ .|.|.+.+|+|.|....-+.+|+...|..
T Consensus 84 ~l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~~H~~ 125 (155)
T 2gli_A 84 NLKTHLRSHTGEK---PYMCEHEGCSKAFSNASDRAKHQNRTHSN 125 (155)
T ss_dssp HHHHHHHHTTTCC---CEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred HHHHHHHHcCCCC---CeeCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 3445555544443 68998666999999999999999777753
No 155
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=49.70 E-value=6.8 Score=27.89 Aligned_cols=25 Identities=24% Similarity=0.529 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2el6_A 12 PYKCSQ--CEKSFSGKLRLLVHQRMHT 36 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 689984 9999999999999987633
No 156
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.45 E-value=4.8 Score=28.54 Aligned_cols=23 Identities=26% Similarity=0.657 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+.+|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eor_A 12 PYNCE--ECGKAFIHDSQLQEHQRI 34 (46)
T ss_dssp SEECT--TTCCEESSHHHHHHHHHH
T ss_pred CccCC--CCCCCcCCHHHHHHHHHh
Confidence 68998 499999999999999875
No 157
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=49.39 E-value=5.3 Score=34.61 Aligned_cols=28 Identities=25% Similarity=0.326 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChHH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E~ 559 (753)
.|.|. .|+|.|....-+.+|+.+.|.+.
T Consensus 100 ~~~C~--~C~k~f~~~~~l~~H~~~h~~~~ 127 (129)
T 2wbt_A 100 TKVCP--VCKKEFTSTDSALDHVCKKHNIC 127 (129)
T ss_dssp CCBCT--TTCCBCSSHHHHHHHHHHTTCCC
T ss_pred CCCCC--CCCcccCCHHHHHHHHHHHCCcc
Confidence 57787 48888888888888888777653
No 158
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.36 E-value=6.1 Score=28.05 Aligned_cols=23 Identities=35% Similarity=0.608 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytj_A 12 PYICA--ECGKAFTIRSNLIKHQKI 34 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHHH
T ss_pred CeECC--CCChhhCCHHHHHHHHHH
Confidence 68998 499999999999999875
No 159
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.36 E-value=5.9 Score=28.14 Aligned_cols=24 Identities=25% Similarity=0.653 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H 35 (46)
T 2eq0_A 12 PYKCH--ECGKVFRRNSHLARHQLIH 35 (46)
T ss_dssp CEECT--TTCCEESSHHHHHHHHTTT
T ss_pred CeECC--CCCchhCCHHHHHHHHHHc
Confidence 68998 4999999999999998763
No 160
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=49.34 E-value=5.8 Score=30.83 Aligned_cols=25 Identities=20% Similarity=0.745 Sum_probs=22.4
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+..|+|.|....-+..|+..
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~ 43 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRI 43 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHH
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHh
Confidence 6999866799999999999999875
No 161
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=49.25 E-value=8.1 Score=29.38 Aligned_cols=25 Identities=20% Similarity=0.566 Sum_probs=22.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+...|
T Consensus 10 ~~~C~--~C~k~f~~~~~l~~H~~~~H 34 (66)
T 2drp_A 10 TYRCK--VCSRVYTHISNFCRHYVTSH 34 (66)
T ss_dssp EEECT--TTCCEESSHHHHHHHHHHHS
T ss_pred ceECC--CCcchhCCHHHHHHHHHHHc
Confidence 68998 59999999999999999877
No 162
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.22 E-value=6.5 Score=27.90 Aligned_cols=24 Identities=25% Similarity=0.731 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytk_A 12 PYKCN--ECGKVFTQNSHLTNHWRIH 35 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHHHH
T ss_pred CEeCC--cCCCccCCHHHHHHHHHHH
Confidence 68998 4999999999999998753
No 163
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.00 E-value=5.7 Score=27.84 Aligned_cols=23 Identities=30% Similarity=0.618 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eoj_A 12 PYECC--ECGKVFSRKDQLVSHQKT 34 (44)
T ss_dssp SCEET--TTTEECSSHHHHHHHHTT
T ss_pred CeeCC--CCCCccCCHHHHHHHHHH
Confidence 58998 499999999999999876
No 164
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=48.98 E-value=6 Score=28.08 Aligned_cols=23 Identities=30% Similarity=0.767 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ema_A 12 RYKCN--ECGKVFSRNSQLSQHQKI 34 (46)
T ss_dssp CEECS--SSCCEESSHHHHHHHHTG
T ss_pred CcCCC--CCcchhCCHHHHHHHHHh
Confidence 68998 499999999999999876
No 165
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.82 E-value=7.6 Score=27.54 Aligned_cols=23 Identities=22% Similarity=0.556 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoq_A 12 PFKCDI--CGKSFCGRSRLNRHSMV 34 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHH
T ss_pred CcCCCc--CCchhCCHHHHHHHHHH
Confidence 689984 99999999999999875
No 166
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=54.35 E-value=3.7 Score=25.49 Aligned_cols=23 Identities=26% Similarity=0.579 Sum_probs=19.4
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 2 p~~C~--~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 2 PYVCE--RCGKRFVQSSQLANHIRH 24 (26)
Confidence 36797 599999999999999864
No 167
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.49 E-value=5.7 Score=28.22 Aligned_cols=25 Identities=28% Similarity=0.692 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en6_A 12 PYGCN--ECGKTFSQKSILSAHQRTHT 36 (46)
T ss_dssp CEEET--TTTEEESSHHHHHHHHHHHS
T ss_pred CeECC--CCCcccCchHHHHHHHHHcC
Confidence 68998 49999999999999998633
No 168
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.37 E-value=7.3 Score=27.55 Aligned_cols=24 Identities=25% Similarity=0.560 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eme_A 12 PYVCDY--CGKAFGLSAELVRHQRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGG
T ss_pred CeECCC--CChhhCCHHHHHHHHHhc
Confidence 689984 999999999999999753
No 169
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=48.23 E-value=6.8 Score=27.70 Aligned_cols=23 Identities=35% Similarity=0.674 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em9_A 12 PYNCK--ECGKSFRWASCLLKHQRV 34 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHGGG
T ss_pred CeECC--ccccccCChHHHHHHHHH
Confidence 68998 499999999999999876
No 170
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.14 E-value=5.5 Score=28.28 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKE--CGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHHHH
T ss_pred CeeCcc--cChhhCCHHHHHHHHHH
Confidence 589984 99999999999999865
No 171
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=48.13 E-value=7.5 Score=31.01 Aligned_cols=25 Identities=24% Similarity=0.583 Sum_probs=13.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+.+|+|.|....-+..|+..
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~ 29 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLRT 29 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHTT
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHHh
Confidence 3455544455555555555555543
No 172
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=48.10 E-value=9.4 Score=28.06 Aligned_cols=25 Identities=20% Similarity=0.498 Sum_probs=21.3
Q ss_pred cccCCCCccccccchhHHHHHHhhhCh
Q 004439 531 YGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 531 ~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
|.|. .|+|.|....-+..|+..-+.
T Consensus 2 ~~C~--~C~~~f~~~~~l~~H~~~h~~ 26 (57)
T 1bbo_A 2 YICE--ECGIRXKKPSMLKKHIRTHTD 26 (57)
T ss_dssp CBCT--TTCCBCSSHHHHHHHHHHTSS
T ss_pred CcCC--CCcCcCCCHHHHHHHHHhcCC
Confidence 7897 599999999999999987443
No 173
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=48.01 E-value=8.1 Score=27.47 Aligned_cols=24 Identities=29% Similarity=0.522 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ely_A 12 PFKCVE--CGKGFSRRSALNVHHKLH 35 (46)
T ss_dssp SBCCSS--SCCCBSSTTHHHHHHHHH
T ss_pred CcccCc--cCcccCCHHHHHHHHHHc
Confidence 689984 999999999999998763
No 174
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.01 E-value=5.3 Score=28.40 Aligned_cols=23 Identities=35% Similarity=0.556 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+.+|+..
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emh_A 12 PYICT--VCGKAFTDRSNLIKHQKI 34 (46)
T ss_dssp SEECT--TTCCEESSHHHHHHHHHH
T ss_pred CcCCC--CCCchhCCHHHHHHHHHh
Confidence 68998 499999999999999875
No 175
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.94 E-value=5.3 Score=28.40 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 12 PYMCNE--CGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp SEECSS--SCCEESCHHHHHHHHHH
T ss_pred CeECCC--CCchhCCHHHHHHHHHH
Confidence 589984 99999999999999875
No 176
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=47.61 E-value=7.4 Score=27.54 Aligned_cols=25 Identities=20% Similarity=0.469 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|.|.|....-+..|++.-+
T Consensus 10 ~~~C~--~C~k~f~~~~~l~~H~~~H~ 34 (45)
T 2epq_A 10 PYSCP--VCGLRFKRKDRMSYHVRSHD 34 (45)
T ss_dssp SSEET--TTTEECSCHHHHHHHHHHHS
T ss_pred CCcCC--CCCcccCCHHHHHHHHHHcc
Confidence 68998 49999999999999997644
No 177
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=47.59 E-value=17 Score=29.41 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=25.4
Q ss_pred cccccCCCCccccccchhHHHHHHhhhC
Q 004439 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 529 ~K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
..|.|.-.+|+..|+...=+..||+.||
T Consensus 37 ~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 37 EPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 3699998999999999998999999988
No 178
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.48 E-value=6.2 Score=27.74 Aligned_cols=25 Identities=16% Similarity=0.638 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2yu5_A 12 PFKCS--KCDRVFTQRNYLVQHERTHA 36 (44)
T ss_dssp SEECS--SSSCEESSSHHHHHHHHHCC
T ss_pred CeECC--CCCchhCCHHHHHHHhHhcC
Confidence 58998 49999999999999987633
No 179
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.45 E-value=6.8 Score=27.87 Aligned_cols=25 Identities=20% Similarity=0.498 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|....|+|.|....-+..|+..
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~ 36 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS 36 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH
Confidence 5899744699999999999999876
No 180
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.35 E-value=8.5 Score=27.36 Aligned_cols=23 Identities=30% Similarity=0.649 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|.|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emz_A 12 PFKCN--ECGKGFGRRSHLAGHLRL 34 (46)
T ss_dssp SCCCS--SSCCCCSSHHHHHHHHHH
T ss_pred CeECC--CCCcccCCHHHHHHHHHH
Confidence 58998 499999999999999875
No 181
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=47.17 E-value=7.5 Score=28.59 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|.+ |+|.|.....+..|+..-
T Consensus 4 ~~~C~~--C~~~f~~~~~l~~H~~~h 27 (57)
T 3uk3_C 4 SRECSY--CGKFFRSNYYLNIHLRTH 27 (57)
T ss_dssp -CBCTT--TCCBCSCHHHHHHHHHHH
T ss_pred CccCCC--CcchhCChHHHHHHHHHc
Confidence 689984 999999999999999863
No 182
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.14 E-value=7.2 Score=27.58 Aligned_cols=24 Identities=25% Similarity=0.722 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2eoe_A 12 PYKCNE--CGKVFTQNSHLANHQRIH 35 (46)
T ss_dssp SSEETT--TTEECSSHHHHHHHHGGG
T ss_pred CeECCC--cChhhCCHHHHHHHHHHc
Confidence 689984 999999999999998753
No 183
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.06 E-value=7.2 Score=27.40 Aligned_cols=24 Identities=25% Similarity=0.636 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|.....+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (44)
T 2emb_A 12 RYECS--KCQATFNLRKHLIQHQKTH 35 (44)
T ss_dssp SEECT--TTCCEESCHHHHHHHGGGG
T ss_pred CeECC--CCCCccCCHHHHHHHHHHc
Confidence 58997 5999999999999999753
No 184
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.72 E-value=7 Score=27.81 Aligned_cols=24 Identities=25% Similarity=0.652 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em2_A 12 PFKCK--ECGKAFRQNIHLASHLRIH 35 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHHHH
T ss_pred CEECC--cCCchhCCHHHHHHHHHHh
Confidence 68998 4999999999999998763
No 185
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=46.69 E-value=9.8 Score=32.39 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=26.5
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
|..+++....++ .|.|.+..|+|.|....-+..|+..-
T Consensus 50 l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~l~~H~~~h 87 (124)
T 1ubd_C 50 LKRHQLVHTGEK---PFQCTFEGCGKRFSLDFNLRTHVRIH 87 (124)
T ss_dssp HHHHGGGTSCCC---CEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCC---CeeCCCCCCcCccCCHHHHHHHHHHh
Confidence 344555444442 68897667999999999999998753
No 186
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.52 E-value=7.4 Score=27.61 Aligned_cols=24 Identities=29% Similarity=0.666 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep2_A 12 PYECSI--CGKSFTKKSQLHVHQQIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHTT
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHh
Confidence 589984 999999999999999753
No 187
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=46.48 E-value=13 Score=33.00 Aligned_cols=40 Identities=28% Similarity=0.460 Sum_probs=29.3
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
|..+++....++ .|.|.+..|+|.|....-+..|+..-+.
T Consensus 78 l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~h~~ 117 (155)
T 2rpc_A 78 LVNHIRVHTGEK---PFPCPFPGCGKIFARSENLKIHKRTHTG 117 (155)
T ss_dssp HHHHTHHHHCCC---SEECSCTTTCCEESCHHHHHHHHTTTCS
T ss_pred HHHHHHhcCCCC---cccCCcCCCCCccCCHHHHHHHHHhhCC
Confidence 334555444443 6899866799999999999999986554
No 188
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=46.02 E-value=11 Score=28.15 Aligned_cols=25 Identities=24% Similarity=0.610 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h~ 26 (60)
T 2adr_A 2 SFVCE--VCTRAFARQEHLKRHYRSHT 26 (60)
T ss_dssp CBCCT--TTCCCBSCHHHHHHHHHTTT
T ss_pred cCcCC--CCccccCCHHHHHHHHHHhC
Confidence 47897 59999999999999998743
No 189
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.57 E-value=7.4 Score=27.68 Aligned_cols=23 Identities=22% Similarity=0.759 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |+|.|.....+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoy_A 12 CFKCNK--CEKTFSCSKYLTQHERI 34 (46)
T ss_dssp CEECSS--SCCEESSSHHHHHHHTT
T ss_pred CEECcC--CCCcCCCHHHHHHHHHH
Confidence 589984 99999999999999875
No 190
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=45.31 E-value=7.6 Score=36.34 Aligned_cols=33 Identities=18% Similarity=0.429 Sum_probs=28.3
Q ss_pred ccccCCCCccccccchhHHHHHHh-hhChHHHHHHH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLK-LKHPELVIELT 564 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~-nKH~E~Veev~ 564 (753)
.|.|. .|.|.|....-+..|++ ++|...|..+.
T Consensus 50 pfyC~--~C~K~F~~~~~L~~H~rsK~HKrrvk~l~ 83 (124)
T 1zr9_A 50 LHRCL--ACARYFIDSTNLKTHFRSKDHKKRLKQLS 83 (124)
T ss_dssp CSEET--TTTEECSSHHHHHHHTTCHHHHHHHHHHT
T ss_pred ceEcc--cCcchhCCHHHHHHHHhhhhhhHHHHHhc
Confidence 79997 49999999999999998 67877776653
No 191
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.19 E-value=7.2 Score=27.76 Aligned_cols=23 Identities=39% Similarity=0.759 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 12 PYGCNE--CGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CEEccc--cCcccCCHHHHHHHHHH
Confidence 589984 99999999999999876
No 192
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.03 E-value=7.6 Score=27.44 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en8_A 12 SHTCD--ECGKNFCYISALRIHQRVH 35 (46)
T ss_dssp SEECT--TTCCEESSHHHHHHHHTTT
T ss_pred CeECC--CcCcccCCHHHHHHHHHHh
Confidence 58998 5999999999999998753
No 193
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.50 E-value=4.3 Score=28.60 Aligned_cols=25 Identities=28% Similarity=0.651 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|.+ |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2eox_A 12 SYNCNE--CGKAFTRIFHLTRHQKIHT 36 (44)
T ss_dssp CEEETT--TTEEESSSHHHHTTHHHHC
T ss_pred CeECcc--cCcccCCHHHHHHHHHHhC
Confidence 589984 9999999999999987643
No 194
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.29 E-value=8.3 Score=27.31 Aligned_cols=24 Identities=21% Similarity=0.403 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yso_A 12 SHQCR--ECGEIFFQYVSLIEHQVLH 35 (46)
T ss_dssp CEECT--TTCCEESSHHHHHHHHHHH
T ss_pred CEEcc--ccChhhCCHHHHHHHHHHh
Confidence 58998 4999999999999998763
No 195
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.09 E-value=6.8 Score=27.80 Aligned_cols=23 Identities=26% Similarity=0.509 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ysp_A 12 PYKCE--KCGKGYNSKFNLDMHQKV 34 (46)
T ss_dssp SEEET--TTTEEESCHHHHHHHHTT
T ss_pred CeECC--CCCCccCCHHHHHHHHHh
Confidence 68998 599999999999999976
No 196
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=43.70 E-value=20 Score=38.04 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=40.6
Q ss_pred CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHH
Q 004439 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWL 273 (753)
Q Consensus 224 ~lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HKdEeWF 273 (753)
..+=||||+.+++-.+|-+||...-..=-..|.++|+ ++|....+-.||
T Consensus 247 ~aIGYkE~~~yL~G~~s~~eai~~~~~~TR~yAKRQ~-TWfR~~~~~~w~ 295 (316)
T 3foz_A 247 RCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQI-TWLRGWEGVHWL 295 (316)
T ss_dssp TSTTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHSCSSCEEE
T ss_pred eeeehhhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeEe
Confidence 3677999999999999999998877666677888876 588887777787
No 197
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.68 E-value=11 Score=26.77 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em8_A 12 PYKCV--ECGKGYKRRLDLDFHQRV 34 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHHH
T ss_pred CeECc--ccCchhCCHHHHHHHHHH
Confidence 68998 499999999999999875
No 198
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=43.66 E-value=15 Score=33.83 Aligned_cols=40 Identities=25% Similarity=0.431 Sum_probs=27.8
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|..+++....++ .|.|. .|+|.|....-+.+|+++-|.+
T Consensus 148 ~L~~H~~~H~~~~---~~~C~--~C~~~f~~~~~L~~H~~~H~~~ 187 (190)
T 2i13_A 148 NLHTHQRTHTGEK---PYKCP--ECGKSFSRRDALNVHQRTHTGK 187 (190)
T ss_dssp HHHHHHHHHHCCC---CEECT--TTCCEESSHHHHHHHHTTC---
T ss_pred HHHHHHHhcCCCC---CeECC--CCCCccCCHHHHHHHHHhcCCC
Confidence 4555666655553 68897 4999999999999998875544
No 199
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.15 E-value=9.2 Score=27.10 Aligned_cols=24 Identities=25% Similarity=0.638 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|. .|+|.|....-+.+|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en1_A 12 PFKCE--ECGKRFTQNSQLHSHQRVH 35 (46)
T ss_dssp SEEET--TTTEEESSHHHHHHHGGGG
T ss_pred CeeCC--CCCcccCCHHHHHHHHHHc
Confidence 68998 4999999999999999763
No 200
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=42.81 E-value=12 Score=29.25 Aligned_cols=26 Identities=19% Similarity=0.416 Sum_probs=22.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 17 ~~~C~--~C~k~f~~~~~l~~H~~~H~~ 42 (74)
T 2lce_A 17 PYKCD--RCQASFRYKGNLASHKTVHTG 42 (74)
T ss_dssp SBCCT--TSSCCBSCHHHHHHHHHHHCC
T ss_pred CeECC--CCCceeCCHHHHHHHHHHcCC
Confidence 69998 599999999999999976443
No 201
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.76 E-value=8.8 Score=27.18 Aligned_cols=23 Identities=30% Similarity=0.801 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytd_A 12 PYKCSE--CGKAFHRHTHLNEHRRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CeECCC--CCCeeCChHHHHHHHHH
Confidence 589984 99999999999999875
No 202
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.84 E-value=6.1 Score=28.05 Aligned_cols=25 Identities=20% Similarity=0.639 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|+|.|....-+..|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytg_A 12 PFKCG--ECGKSYNQRVHLTQHQRVHT 36 (46)
T ss_dssp SEECT--TTCCEESSSHHHHTTGGGGS
T ss_pred CeECC--CCCcccCCHHHHHHHHHHcC
Confidence 68998 49999999999999987533
No 203
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=41.82 E-value=22 Score=29.82 Aligned_cols=26 Identities=15% Similarity=0.388 Sum_probs=18.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|.+ |.|.|....-+.+|+..-+.
T Consensus 66 ~~~C~~--C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 66 VFTCSV--CQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred CeECCC--CCCccCCHHHHHHHHHHcCC
Confidence 577764 88888888778888766444
No 204
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.32 E-value=9.6 Score=26.99 Aligned_cols=23 Identities=22% Similarity=0.408 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2enc_A 12 PFKCE--ECGKGFYTNSQCYSHQRS 34 (46)
T ss_dssp SEECS--SSCCEESSHHHHHHHHHH
T ss_pred CcCCC--CCCCcCCChHHHHHHHHH
Confidence 68998 499999999999999875
No 205
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=41.09 E-value=8.2 Score=27.89 Aligned_cols=25 Identities=20% Similarity=0.453 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|.|.|.....+..|++.-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (48)
T 2epr_A 12 QVACE--ICGKIFRDVYHLNRHKLSHS 36 (48)
T ss_dssp SEEET--TTTEEESSHHHHHHHGGGSC
T ss_pred CeeCC--CCCcccCCHHHHHHHHHhcC
Confidence 68998 49999999999999987633
No 206
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.88 E-value=9.2 Score=27.01 Aligned_cols=23 Identities=22% Similarity=0.336 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~ 34 (46)
T 2epw_A 12 PCKCT--ECGKAFCWKSQLIMHQRT 34 (46)
T ss_dssp SEECS--SSCCEESSSHHHHHHHHH
T ss_pred CeeCC--CCCCccCCHHHHHHHHHH
Confidence 58998 499999999999999876
No 207
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=40.74 E-value=12 Score=28.89 Aligned_cols=26 Identities=12% Similarity=0.285 Sum_probs=22.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|.+ |.|.|....-+..|+..-+.
T Consensus 9 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 34 (70)
T 1x5w_A 9 PEKCSE--CSYSCSSKAALRIHERIHCT 34 (70)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGCC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcCC
Confidence 689984 99999999999999987433
No 208
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=40.64 E-value=18 Score=30.69 Aligned_cols=23 Identities=22% Similarity=0.397 Sum_probs=20.7
Q ss_pred ccccCCCCccccc-cchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLF-HAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLF-KgpEFV~KHI~n 554 (753)
.|.|. .|+|.| ....-+.+|+.+
T Consensus 34 ~~~C~--~C~k~F~~~~~~L~~H~~~ 57 (96)
T 2ctd_A 34 SVSCP--TCQAVGRKTIEGLKKHMEN 57 (96)
T ss_dssp CEECT--TTCSCEESSHHHHHHHHHH
T ss_pred CcCCC--CCCCCcccCHHHHHHHHHH
Confidence 68998 499999 999999999876
No 209
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=39.46 E-value=10 Score=32.22 Aligned_cols=27 Identities=26% Similarity=0.408 Sum_probs=23.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|. .|+|.|....-+.+|++.-|.|
T Consensus 28 ~h~C~--~Cgk~F~~~~~L~~H~~~H~~~ 54 (85)
T 2lv2_A 28 CHLCP--VCGESFASKGAQERHLRLLHAA 54 (85)
T ss_dssp TEECT--TSCCEESSHHHHHHHHHTTSCS
T ss_pred CEECC--CCCCCcCcHHHHhhhhhhccCC
Confidence 68998 4999999999999999876654
No 210
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.39 E-value=7.4 Score=26.94 Aligned_cols=23 Identities=22% Similarity=0.563 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 11 ~~~C~--~C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 11 PYKCE--TCGARFVQVAHLRAHVLI 33 (42)
T ss_dssp SEECT--TTCCEESSHHHHHHHTHH
T ss_pred CEeCC--CcChhhCCHHHHHHHHHH
Confidence 58998 599999999999999874
No 211
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.36 E-value=12 Score=29.19 Aligned_cols=25 Identities=28% Similarity=0.701 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|. .|.|.|....-+..|++.-+
T Consensus 14 ~~~C~--~C~k~f~~~~~L~~H~~~h~ 38 (72)
T 1x6e_A 14 PYGCV--ECGKAFSRSSILVQHQRVHT 38 (72)
T ss_dssp CEECS--SSCCEESSHHHHHHHHHGGG
T ss_pred CccCC--CCCCccCCHHHHHHHHHhcC
Confidence 68998 49999999999999998643
No 212
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=38.32 E-value=14 Score=32.89 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=25.4
Q ss_pred cccccCCCCccccccchhHHHHHHhhhChHHHHHHHh
Q 004439 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTS 565 (753)
Q Consensus 529 ~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E~Veev~~ 565 (753)
+...|. .|+|.||. +.+||.+.|.---++-+.
T Consensus 20 d~iiCl--ecGK~fK~---LkRHL~~~hgltpeeYR~ 51 (87)
T 2jsp_A 20 DHIVCL--ECGGSFKS---LKRHLTTHHSMTPEEYRE 51 (87)
T ss_dssp SCEECT--BTCCEESB---HHHHHHHTTCSCHHHHHH
T ss_pred CceEec--ccchhhHH---HHHHHHHccCCCHHHHHH
Confidence 478997 69999996 889999989776666544
No 213
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=38.24 E-value=17 Score=29.82 Aligned_cols=26 Identities=27% Similarity=0.442 Sum_probs=22.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
-|.|. .|.|.|.....+.+|++.-+.
T Consensus 13 py~C~--~CgK~F~~~s~L~~H~r~Htg 38 (66)
T 2epp_A 13 ILPCG--LCGKVFTDANRLRQHEAQHGV 38 (66)
T ss_dssp CCCCT--TTCCCCSCHHHHHHHHHHHTT
T ss_pred CcCCC--CCCCccCCHHHHHhhhhhhCC
Confidence 58997 599999999999999987443
No 214
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.19 E-value=17 Score=29.36 Aligned_cols=27 Identities=15% Similarity=0.304 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
++.|. .|+|.|....-+..|+...|..
T Consensus 25 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~ 51 (95)
T 2ej4_A 25 SRPKK--SCDRTFSTMHELVTHVTMEHVG 51 (95)
T ss_dssp SSSCC--CCCCCCSSHHHHHHHHHHTTTC
T ss_pred CCccc--ccccccCCHHHHHHHHHHhccC
Confidence 45676 5999999999999999886754
No 215
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.57 E-value=9.5 Score=27.01 Aligned_cols=23 Identities=26% Similarity=0.738 Sum_probs=20.4
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yu8_A 12 PYKCN--ECGKVFTQNSHLARHRRV 34 (46)
T ss_dssp SEECS--SSCCEESSSHHHHHHTHH
T ss_pred CeECC--cCCchhCCHHHHHHHHHh
Confidence 58998 499999999999999864
No 216
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=34.56 E-value=81 Score=33.63 Aligned_cols=49 Identities=18% Similarity=0.411 Sum_probs=40.9
Q ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHh
Q 004439 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 274 (753)
Q Consensus 225 lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HKdEeWFr 274 (753)
.+=||||+.+++-.+|-+||...-..=-..|.++|+ ++|....+-.||-
T Consensus 240 aIGYkE~~~yL~G~~sl~eaie~i~~~TR~yAKRQ~-TWfR~~~~~~w~~ 288 (322)
T 3exa_A 240 AIGYKEMYDYLDGNVTLEEAIDTLKRNSRRYAKRQL-TWFRNKANVTWFD 288 (322)
T ss_dssp STTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHTSTTEEEEE
T ss_pred eeeHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-HHhcCCCCCeEeC
Confidence 577999999999999999998877666667888876 5888888888884
No 217
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.35 E-value=18 Score=28.50 Aligned_cols=26 Identities=12% Similarity=0.179 Sum_probs=22.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|.+ |.|.|.....+..|+..-+.
T Consensus 7 ~~~C~~--C~k~f~~~~~L~~H~~~h~~ 32 (78)
T 2d9h_A 7 GLQCEI--CGFTCRQKASLNWHQRKHAE 32 (78)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHHH
T ss_pred CeECCC--CCCeeCCHHHHHHHHHHhhc
Confidence 689984 99999999999999976443
No 218
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=34.26 E-value=26 Score=32.21 Aligned_cols=27 Identities=22% Similarity=0.363 Sum_probs=17.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|.+..|+|.|....-+.+|+..-+
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~H~ 130 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFSHT 130 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGGGS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHHhC
Confidence 567743357777777777777776533
No 219
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.71 E-value=24 Score=28.57 Aligned_cols=22 Identities=23% Similarity=0.303 Sum_probs=19.9
Q ss_pred cccCCCCccccccchhHHHHHHhh
Q 004439 531 YGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 531 ~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
|.|. .|+|.|....-+..|++.
T Consensus 63 ~~C~--~C~k~f~~~~~L~~H~~~ 84 (95)
T 2ej4_A 63 EECP--REGKSFKAKYKLVNHIRV 84 (95)
T ss_dssp TTCS--STTCCCSSHHHHHHHHHH
T ss_pred cCCC--CCCcccCCHHHHHHHHHh
Confidence 7897 599999999999999975
No 220
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.57 E-value=22 Score=31.16 Aligned_cols=26 Identities=27% Similarity=0.434 Sum_probs=16.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|.|. .|+|.|+...-+..|+...|.
T Consensus 50 pf~C~--~Cgk~F~~~~~L~~H~~r~Ht 75 (102)
T 2ghf_A 50 SYVCV--ECNFLTKRYDALSEHNLKYHP 75 (102)
T ss_dssp CEEET--TTTEEESSTHHHHTHHHHTST
T ss_pred CcCCC--CCCcccCCHHHHHHHHHHhcC
Confidence 46776 377777777777777444453
No 221
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.39 E-value=21 Score=28.01 Aligned_cols=25 Identities=28% Similarity=0.608 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
.|.|.+ |.|.|....-+..|+..-+
T Consensus 18 ~~~C~~--C~~~f~~~~~l~~H~~~h~ 42 (77)
T 2cot_A 18 RYKCDE--CGKSFSHSSDLSKHRRTHT 42 (77)
T ss_dssp SSBCSS--SCCBCSCHHHHHHHHTTTC
T ss_pred CEECCC--CCcccCCHHHHHHHHHHcC
Confidence 689984 9999999999999997643
No 222
>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}
Probab=32.25 E-value=15 Score=33.03 Aligned_cols=26 Identities=35% Similarity=0.561 Sum_probs=20.4
Q ss_pred ccCCCCccccccchhHHHHHHhhhCh
Q 004439 532 GCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 532 rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
.|..++|.+.|....-..||+.+-|.
T Consensus 14 ~CkWPGCe~~~ed~~~FlkHL~~eH~ 39 (93)
T 4i1l_A 14 VCKWPGCEKVFEEPEEFLKHCQADHL 39 (93)
T ss_dssp ----CCSTTTTHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCcccCHHHHHHHhhcccC
Confidence 69899999999999999999998885
No 223
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=30.56 E-value=40 Score=30.88 Aligned_cols=40 Identities=25% Similarity=0.449 Sum_probs=22.8
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH~ 557 (753)
|..+++....++ .|.|....|+|.|....-+.+|+...|.
T Consensus 60 l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~l~~H~~~~h~ 99 (190)
T 1tf6_A 60 LTRHSLTHTGEK---NFTCDSDGCDLRFTTKANMKKHFNRFHN 99 (190)
T ss_dssp HHHHHTTTTTCC---CEECCSSSCCCEESCHHHHHHHHHTTSS
T ss_pred HHHHHHHccCCC---ceeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 444554433332 4666533477777777777777666663
No 224
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=30.01 E-value=26 Score=26.26 Aligned_cols=25 Identities=28% Similarity=0.491 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
|--|. .|-|++..-.-+.|||+--|
T Consensus 9 kqhcr--fckkkysdvknlikhire~h 33 (37)
T 2elu_A 9 KQHCR--FCKKKYSDVKNLIKHIRDAH 33 (37)
T ss_dssp CCEET--TTTEECSSHHHHHHHHHHTT
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhc
Confidence 55787 59999999999999998766
No 225
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=29.38 E-value=3.8 Score=27.19 Aligned_cols=23 Identities=30% Similarity=0.729 Sum_probs=19.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
-|.|. .|+|.|.....+..|+..
T Consensus 2 p~~C~--~C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 2 AFACP--ACPKRFMRSDALSKHIKT 24 (32)
T ss_dssp CSSSS--SSCTTHHHHHTTSSSTTS
T ss_pred CCCCC--CCCcccCCHHHHHHHHHH
Confidence 37897 599999998888888765
No 226
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.69 E-value=31 Score=26.41 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=24.0
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
|..+++. +.|+ .|.|.. .|+|.|....-+..|+++
T Consensus 25 L~~H~~~-~~~~---p~~C~~-~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 25 IQSHQYQ-CPRL---PVACPN-QCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp HHHHHHH-CSSS---EEECTT-CCSCCEEETTTHHHHHHT
T ss_pred HHHHHHH-cCCc---CccCCc-ccCcccccHHHHHHHHHh
Confidence 3445443 4443 588861 399999999889999865
No 227
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=27.46 E-value=1e+02 Score=32.54 Aligned_cols=49 Identities=16% Similarity=0.248 Sum_probs=38.9
Q ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHh
Q 004439 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 274 (753)
Q Consensus 225 lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HKdEeWFr 274 (753)
.+=||||+.++.-.+|-+||...-..==..|.++|+ ++|....+-.||-
T Consensus 254 aIGyke~~~yl~g~~~~~eai~~~~~~Tr~yAKRQ~-TWfr~~~~~~w~~ 302 (323)
T 3crm_A 254 AVGYRQVWDYLDGKLSYAEMTERGIIATRQLAKRQF-TWLRSWSHLHWMD 302 (323)
T ss_dssp STTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH-HHHHTCSSCEEEE
T ss_pred eecHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeEec
Confidence 678999999999999999998766555556777775 5777777777875
No 228
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=27.11 E-value=32 Score=31.61 Aligned_cols=37 Identities=30% Similarity=0.525 Sum_probs=26.4
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhC
Q 004439 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (753)
Q Consensus 515 le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~nKH 556 (753)
|..+++....++ .|.|. .|+|.|....-+.+|+..-+
T Consensus 121 l~~H~~~h~~~~---~~~C~--~C~~~f~~~~~L~~H~~~H~ 157 (190)
T 2i13_A 121 LRAHQRTHTGEK---PYKCP--ECGKSFSREDNLHTHQRTHT 157 (190)
T ss_dssp HHHHHHHHHCCC---CEECT--TTCCEESCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC---CeECC--CCCcccCCHHHHHHHHHhcC
Confidence 445555544453 68897 49999999999999987643
No 229
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=25.70 E-value=48 Score=29.89 Aligned_cols=36 Identities=36% Similarity=0.459 Sum_probs=27.7
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 004439 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 514 ~le~fVkk~~DEk~g~K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|..+++..+.|+ .|.|. .|+|.|.....+..|+..
T Consensus 37 ~L~~H~~~H~~~k---~~~C~--~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 37 SLRRHFNIHSWEK---KYPCR--YCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp HHHHHHHHHHCCS---CEECS--SSSCEESSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCC---CeeCC--ccCeecccccchhhhccc
Confidence 4455666655664 68998 599999999999999864
No 230
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=25.31 E-value=33 Score=28.22 Aligned_cols=30 Identities=27% Similarity=0.294 Sum_probs=23.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhh-ChHHHH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK-HPELVI 561 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK-H~E~Ve 561 (753)
+-.|. .|+++|-+.-=|+-|||.| |=++|.
T Consensus 13 ~~eC~--lC~vkYs~r~slqDHIFs~qHI~~vk 43 (55)
T 2yrk_A 13 KPECT--LCGVKYSARLSIRDHIFSKQHISKVR 43 (55)
T ss_dssp CSCCT--TTTCCCCSSSCHHHHHTSHHHHHHHH
T ss_pred Ccccc--ccCcccccccchhhhhccHHHHHHHH
Confidence 45798 4999999999999999964 555444
No 231
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.09 E-value=17 Score=30.69 Aligned_cols=23 Identities=17% Similarity=0.507 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
.|.|. .|+|.|....-+..|+..
T Consensus 19 ~~~C~--~C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 19 KFRCK--DCSAAYDTLVELTVHMNE 41 (115)
T ss_dssp SEEBS--SSSCEESSHHHHHHHHHH
T ss_pred CEECC--ccCchhcCHHHHHHHHHH
Confidence 69998 599999999999999986
No 232
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=24.47 E-value=23 Score=28.50 Aligned_cols=24 Identities=17% Similarity=0.640 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nK 555 (753)
.|.|.+ |+|.|....-+..|+..-
T Consensus 3 ~~~C~~--C~k~f~~~~~L~~H~~~H 26 (88)
T 1llm_C 3 PFQCRI--CMRNFSRSDHLTTHIRTH 26 (88)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHHH
T ss_pred CCcCCC--CCCccCCHHHHHHHHHHc
Confidence 588984 999999999999999763
No 233
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=22.79 E-value=39 Score=26.78 Aligned_cols=23 Identities=22% Similarity=0.446 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~n 554 (753)
-|.|. .|+|.|....-+..|++.
T Consensus 4 py~C~--~C~k~F~~~~~L~~H~~~ 26 (60)
T 4gzn_C 4 PFFCN--FCGKTYRDASGLSRHRRA 26 (60)
T ss_dssp CEECT--TTCCEESSHHHHHHHHHH
T ss_pred CccCC--CCCCEeCCHHHHHHHHHH
Confidence 58998 599999999999999875
No 234
>2kw6_A Cyclin-dependent kinase 2-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=22.74 E-value=34 Score=28.95 Aligned_cols=19 Identities=37% Similarity=0.483 Sum_probs=16.7
Q ss_pred CchhHHHHhHHHHHHHHHH
Q 004439 366 SEPRRIQVDIEQAQALVRK 384 (753)
Q Consensus 366 S~peRI~~DLeqAr~LV~k 384 (753)
+..+||++||.+|+.||+-
T Consensus 36 ~~~ERLkR~I~hAr~LVrE 54 (65)
T 2kw6_A 36 SAMERLKRGIIHARGLVRE 54 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3578999999999999974
No 235
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=22.66 E-value=36 Score=24.64 Aligned_cols=21 Identities=19% Similarity=0.466 Sum_probs=19.1
Q ss_pred ccccCCCCccccccchhHHHHHH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHL 552 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI 552 (753)
-|.|. .|+|-|....-+.+|+
T Consensus 8 p~~C~--~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCL--PCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEET--TTTEECSCHHHHHHHH
T ss_pred CeECC--CCCCccCCHhHccCcC
Confidence 58897 5999999999999998
No 236
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=22.04 E-value=71 Score=27.73 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=25.7
Q ss_pred ccccCCCCccccc-cchhHH-HHHHh-hhChHHHHHHHh
Q 004439 530 KYGCGAKGCTKLF-HAAEFV-HKHLK-LKHPELVIELTS 565 (753)
Q Consensus 530 K~rC~v~gCtKLF-KgpEFV-~KHI~-nKH~E~Veev~~ 565 (753)
||-|. .|.+-| +..-.| ++|+. .||-+.|..--.
T Consensus 3 kYyCd--YCd~~lt~Ds~s~Rk~H~~G~kH~~nv~~yy~ 39 (77)
T 3cw1_L 3 KFYCD--YCDTYLTHDSPSVRKTHCSGRKHKENVKDYYC 39 (77)
T ss_pred Ccccc--cCCceecCCCHHHHHHHHccHHHHHHHHHHHH
Confidence 78898 599998 787886 67887 788886655433
No 237
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=21.38 E-value=54 Score=34.95 Aligned_cols=50 Identities=18% Similarity=0.444 Sum_probs=39.9
Q ss_pred CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHh
Q 004439 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 274 (753)
Q Consensus 224 ~lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HKdEeWFr 274 (753)
..+=||||+.+++-.+|-+||...-..==..|.++|+ ++|....+-.||-
T Consensus 245 ~aIGyke~~~yl~g~~~~~ea~~~~~~~Tr~yAKRQ~-TWfr~~~~~~w~~ 294 (340)
T 3d3q_A 245 QAIGYKELVPVIKGNISMENAVEKLKQHSRQYAKRQL-TWFKNKMNVHWLN 294 (340)
T ss_dssp GSTTTTTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHHTCCCEEEE
T ss_pred hhccHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeeec
Confidence 3678999999999999999998877766677777775 5777777777764
No 238
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces cerevisiae}
Probab=21.29 E-value=1.1e+02 Score=33.68 Aligned_cols=23 Identities=22% Similarity=0.420 Sum_probs=17.6
Q ss_pred cccccCCCCccccccchhHHHHHHh
Q 004439 529 WKYGCGAKGCTKLFHAAEFVHKHLK 553 (753)
Q Consensus 529 ~K~rC~v~gCtKLFKgpEFV~KHI~ 553 (753)
...-|. -|.|+|+...-...|+.
T Consensus 291 ~~l~C~--~c~K~Fs~~~v~~~hL~ 313 (402)
T 4dgw_A 291 KGIYCP--FCSRWFKTSSVFESHLV 313 (402)
T ss_dssp TEECBT--TTTBCBSSHHHHHTTSS
T ss_pred cCeeeh--hhhhhhccccccHHHhc
Confidence 357796 59999998777766665
No 239
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=21.07 E-value=61 Score=30.08 Aligned_cols=48 Identities=25% Similarity=0.337 Sum_probs=37.9
Q ss_pred cccccCCCCccccccchhHHHHHHhhhChHHHHHHHhh----HHHHHHHhhhcc
Q 004439 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSK----VREELYFQNYMN 578 (753)
Q Consensus 529 ~K~rC~v~gCtKLFKgpEFV~KHI~nKH~E~Veev~~k----v~E~~yFNNYl~ 578 (753)
....|- .|.+.|...+-+.+|++.+|.==+.+++++ ....+-+-||+.
T Consensus 14 ~~~~CL--FCd~~~~s~~~~l~H~k~~H~FD~~~i~~~~~LDfY~~IKLINyIR 65 (121)
T 1wir_A 14 QHTPCL--FCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIR 65 (121)
T ss_dssp CCEECS--SSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CceeEe--cCCCcccCHHHHHHHHHHhcCCCHHHHHHhcCCCceEEEEEEEeee
Confidence 357896 699999999999999999998544454433 456677889998
No 240
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.98 E-value=31 Score=26.42 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 004439 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (753)
Q Consensus 530 K~rC~v~gCtKLFKgpEFV~KHI~nKH~E 558 (753)
.|.|. .|+|.|. ..-+.+|+.. +.+
T Consensus 10 ~~~C~--~C~k~f~-~~~L~~H~~~-~~~ 34 (66)
T 2eod_A 10 TQPCT--YCTKEFV-FDTIQSHQYQ-CPR 34 (66)
T ss_dssp EEECS--SSCCEEE-HHHHHHHHHH-CSS
T ss_pred Ceecc--ccCCccC-HHHHHHHHHH-cCC
Confidence 58897 5999999 9999999876 544
Done!