Query 004442
Match_columns 753
No_of_seqs 369 out of 2192
Neff 7.1
Searched_HMMs 29240
Date Tue Mar 26 01:21:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004442.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004442hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 3.7E-48 1.3E-52 420.5 24.4 253 473-753 41-304 (329)
2 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.1E-48 1.4E-52 415.6 23.4 237 473-753 32-276 (311)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.7E-48 5.8E-53 417.7 19.8 252 472-753 12-274 (299)
4 4gt4_A Tyrosine-protein kinase 100.0 3.3E-48 1.1E-52 417.1 21.9 255 473-753 26-291 (308)
5 3hyh_A Carbon catabolite-derep 100.0 2.6E-47 9E-52 403.3 23.4 233 473-753 13-254 (275)
6 4fih_A Serine/threonine-protei 100.0 3E-47 1E-51 414.7 24.3 235 472-753 73-315 (346)
7 4b9d_A Serine/threonine-protei 100.0 8.1E-48 2.8E-52 419.8 19.5 237 473-753 24-268 (350)
8 3ubd_A Ribosomal protein S6 ki 100.0 8.8E-48 3E-52 412.4 18.8 235 473-753 24-268 (304)
9 4g3f_A NF-kappa-beta-inducing 100.0 5E-47 1.7E-51 411.6 21.6 238 472-753 57-301 (336)
10 3fpq_A Serine/threonine-protei 100.0 2.4E-46 8.2E-51 399.0 24.0 233 472-753 25-274 (290)
11 3omv_A RAF proto-oncogene seri 100.0 1.3E-46 4.5E-51 404.0 21.5 236 472-753 35-285 (307)
12 4fie_A Serine/threonine-protei 100.0 2.7E-46 9.3E-51 416.9 24.7 235 472-753 150-392 (423)
13 4ase_A Vascular endothelial gr 100.0 2.3E-45 7.7E-50 402.1 21.3 256 471-753 62-332 (353)
14 3hmm_A TGF-beta receptor type- 100.0 2.3E-45 8E-50 394.1 16.6 238 472-753 2-282 (303)
15 4g31_A Eukaryotic translation 100.0 1.2E-44 4.3E-49 387.8 19.2 238 473-753 5-271 (299)
16 4b99_A Mitogen-activated prote 100.0 2.1E-43 7.2E-48 392.6 25.6 239 471-753 52-336 (398)
17 3v5w_A G-protein coupled recep 100.0 7.7E-43 2.6E-47 406.4 23.2 235 472-753 188-436 (689)
18 4f9c_A Cell division cycle 7-r 100.0 1.8E-42 6E-47 380.6 23.6 202 470-715 18-251 (361)
19 3uto_A Twitchin; kinase, muscl 100.0 1E-41 3.5E-46 396.0 22.8 239 471-753 155-402 (573)
20 1o6l_A RAC-beta serine/threoni 100.0 1.6E-39 5.4E-44 353.8 26.2 235 473-753 5-247 (337)
21 3fe3_A MAP/microtubule affinit 100.0 2.4E-39 8.3E-44 350.8 25.3 237 470-753 12-256 (328)
22 3txo_A PKC-L, NPKC-ETA, protei 100.0 1E-39 3.6E-44 357.4 22.2 236 472-753 22-266 (353)
23 1xjd_A Protein kinase C, theta 100.0 3.8E-39 1.3E-43 351.9 25.1 237 472-753 16-260 (345)
24 3zgw_A Maternal embryonic leuc 100.0 2.9E-39 1E-43 353.2 24.1 240 469-753 6-252 (347)
25 1fot_A TPK1 delta, CAMP-depend 100.0 4.4E-39 1.5E-43 347.3 24.9 233 473-753 6-245 (318)
26 4dc2_A Protein kinase C IOTA t 100.0 4.4E-39 1.5E-43 357.9 25.4 237 472-753 51-304 (396)
27 3a8x_A Protein kinase C IOTA t 100.0 1.1E-38 3.6E-43 348.2 25.4 235 473-753 9-261 (345)
28 2i0e_A Protein kinase C-beta I 100.0 7.1E-39 2.4E-43 350.9 23.9 236 472-753 19-263 (353)
29 2r5t_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 356.1 20.8 237 472-753 37-281 (373)
30 2yab_A Death-associated protei 100.0 1.9E-38 6.6E-43 348.5 26.2 240 469-753 8-264 (361)
31 3c0i_A Peripheral plasma membr 100.0 1.3E-38 4.3E-43 347.8 24.3 244 470-753 21-278 (351)
32 3a62_A Ribosomal protein S6 ki 100.0 1.4E-38 4.7E-43 343.9 24.0 236 472-753 16-263 (327)
33 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.4E-38 4.9E-43 347.9 24.0 233 472-753 40-280 (350)
34 3fxz_A Serine/threonine-protei 100.0 1.5E-38 5E-43 338.9 22.7 238 470-753 17-261 (297)
35 1tki_A Titin; serine kinase, m 100.0 1.7E-38 5.8E-43 342.7 21.6 240 470-753 2-249 (321)
36 2bdw_A Hypothetical protein K1 100.0 4E-38 1.4E-42 345.7 24.8 240 469-753 25-276 (362)
37 3kul_A Ephrin type-A receptor 100.0 2.5E-38 8.7E-43 341.6 22.4 244 469-753 45-298 (325)
38 3niz_A Rhodanese family protei 100.0 6.3E-38 2.2E-42 336.2 25.0 239 469-753 17-292 (311)
39 4hcu_A Tyrosine-protein kinase 100.0 4E-38 1.4E-42 329.1 22.7 239 472-753 9-251 (269)
40 4fr4_A YANK1, serine/threonine 100.0 4.7E-38 1.6E-42 348.2 24.3 236 471-753 13-262 (384)
41 4eqm_A Protein kinase; transfe 100.0 4.5E-38 1.5E-42 334.4 23.0 241 468-753 6-259 (294)
42 2psq_A Fibroblast growth facto 100.0 5.1E-38 1.7E-42 345.8 24.0 256 471-753 79-349 (370)
43 4ejn_A RAC-alpha serine/threon 100.0 1.9E-38 6.6E-43 357.4 21.1 237 471-753 146-391 (446)
44 2y0a_A Death-associated protei 100.0 8.7E-38 3E-42 337.5 25.2 240 469-753 7-263 (326)
45 3p1a_A MYT1 kinase, membrane-a 100.0 3.2E-38 1.1E-42 338.2 21.5 235 470-753 54-296 (311)
46 3p86_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 337.8 22.3 240 470-753 34-283 (309)
47 3soa_A Calcium/calmodulin-depe 100.0 7.2E-38 2.5E-42 353.2 25.4 241 469-753 7-259 (444)
48 3o0g_A Cell division protein k 100.0 8.7E-38 3E-42 330.8 24.3 236 473-753 2-274 (292)
49 3ork_A Serine/threonine protei 100.0 8.5E-39 2.9E-43 342.2 16.7 243 469-753 8-265 (311)
50 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-38 7.9E-43 344.5 19.6 235 471-753 7-250 (336)
51 3v8s_A RHO-associated protein 100.0 4.9E-38 1.7E-42 351.0 22.7 239 469-752 65-318 (410)
52 2w4o_A Calcium/calmodulin-depe 100.0 5.7E-38 2E-42 342.5 22.7 241 469-753 49-297 (349)
53 2vd5_A DMPK protein; serine/th 100.0 4.5E-38 1.5E-42 351.6 22.2 241 469-753 57-316 (412)
54 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.1E-37 3.7E-42 325.3 23.5 240 471-753 6-249 (268)
55 4aw2_A Serine/threonine-protei 100.0 6E-38 2E-42 353.1 22.6 241 469-752 70-327 (437)
56 2zv2_A Calcium/calmodulin-depe 100.0 1.1E-37 3.8E-42 331.0 22.7 235 472-753 12-284 (298)
57 3ugc_A Tyrosine-protein kinase 100.0 4.9E-38 1.7E-42 332.9 19.8 242 470-753 7-276 (295)
58 3qd2_B Eukaryotic translation 100.0 2.1E-38 7.2E-43 339.6 17.0 243 471-753 4-317 (332)
59 3gen_A Tyrosine-protein kinase 100.0 1.6E-37 5.6E-42 326.6 23.4 241 470-753 21-265 (283)
60 1ob3_A PFPK5, cell division co 100.0 1.3E-37 4.3E-42 329.2 22.5 235 473-753 2-272 (288)
61 2c30_A Serine/threonine-protei 100.0 2.1E-37 7.2E-42 333.8 24.3 234 473-753 45-286 (321)
62 2qr7_A Ribosomal protein S6 ki 100.0 5.6E-38 1.9E-42 342.0 19.9 240 470-753 19-269 (342)
63 3kn6_A Ribosomal protein S6 ki 100.0 9.6E-38 3.3E-42 337.2 21.3 237 473-753 8-262 (325)
64 2eue_A Carbon catabolite derep 100.0 1E-37 3.4E-42 327.1 20.8 234 473-753 13-254 (275)
65 3s95_A LIMK-1, LIM domain kina 100.0 7.8E-38 2.7E-42 334.0 20.1 240 472-753 9-267 (310)
66 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.6E-38 8.7E-43 346.4 16.7 243 470-753 62-323 (365)
67 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.8E-37 6.2E-42 357.6 24.5 241 471-753 183-435 (543)
68 3tki_A Serine/threonine-protei 100.0 6.5E-38 2.2E-42 338.2 19.3 239 471-753 5-253 (323)
69 3uc3_A Serine/threonine-protei 100.0 1.8E-37 6.2E-42 340.2 23.0 237 472-753 19-266 (361)
70 3l9p_A Anaplastic lymphoma kin 100.0 5.2E-38 1.8E-42 345.1 18.6 249 471-753 69-330 (367)
71 1qcf_A Haematopoetic cell kina 100.0 1.3E-37 4.3E-42 351.8 22.1 242 469-753 184-429 (454)
72 3pfq_A PKC-B, PKC-beta, protei 100.0 1.9E-37 6.6E-42 366.9 24.7 236 472-753 340-584 (674)
73 3cbl_A C-FES, proto-oncogene t 100.0 5.4E-38 1.9E-42 346.1 18.5 241 471-753 112-359 (377)
74 3kk8_A Calcium/calmodulin depe 100.0 6.1E-37 2.1E-41 322.0 25.7 240 470-753 3-253 (284)
75 2qol_A Ephrin receptor; recept 100.0 6.4E-38 2.2E-42 345.5 18.6 242 471-753 43-294 (373)
76 1kob_A Twitchin; kinase, intra 100.0 2.4E-37 8.1E-42 342.9 23.2 242 469-753 47-296 (387)
77 1nxk_A MAP kinase-activated pr 100.0 1.8E-37 6.2E-42 345.1 22.3 237 473-753 61-313 (400)
78 1k9a_A Carboxyl-terminal SRC k 100.0 2.9E-37 1E-41 348.5 24.0 238 470-753 190-430 (450)
79 4fvq_A Tyrosine-protein kinase 100.0 7.4E-38 2.5E-42 329.9 17.9 238 471-753 6-260 (289)
80 3f3z_A Calcium/calmodulin-depe 100.0 6.3E-37 2.2E-41 321.1 24.8 236 470-753 6-253 (277)
81 3dbq_A Dual specificity protei 100.0 3.5E-37 1.2E-41 334.7 23.6 238 470-753 6-265 (343)
82 2a2a_A Death-associated protei 100.0 6.5E-37 2.2E-41 329.0 25.4 240 469-753 8-264 (321)
83 3g33_A Cell division protein k 100.0 2.3E-37 7.7E-42 330.1 21.6 240 469-753 5-288 (308)
84 2acx_A G protein-coupled recep 100.0 2.4E-37 8.1E-42 358.1 23.4 239 470-753 181-431 (576)
85 1x8b_A WEE1HU, WEE1-like prote 100.0 3.5E-37 1.2E-41 322.8 22.4 240 470-753 8-271 (289)
86 3t9t_A Tyrosine-protein kinase 100.0 3.8E-37 1.3E-41 320.3 22.4 239 472-753 7-249 (267)
87 2x4f_A Myosin light chain kina 100.0 3.1E-37 1.1E-41 340.1 22.9 234 476-753 92-334 (373)
88 3qup_A Tyrosine-protein kinase 100.0 2.4E-37 8.2E-42 331.9 21.4 248 469-753 19-283 (323)
89 3fdn_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 323.6 21.9 236 471-753 7-249 (279)
90 3gni_B Strad alpha; kinase fol 100.0 3.5E-37 1.2E-41 340.2 22.8 243 471-753 23-325 (389)
91 4euu_A Serine/threonine-protei 100.0 2.7E-37 9.2E-42 331.5 21.1 243 469-753 5-294 (319)
92 3oz6_A Mitogen-activated prote 100.0 1.7E-37 5.8E-42 342.9 20.1 240 469-753 5-320 (388)
93 1csn_A Casein kinase-1; phosph 100.0 4.7E-37 1.6E-41 324.8 22.6 244 469-753 6-268 (298)
94 2rku_A Serine/threonine-protei 100.0 1.1E-36 3.9E-41 322.2 25.2 239 470-753 12-257 (294)
95 3vhe_A Vascular endothelial gr 100.0 1.6E-37 5.4E-42 337.9 19.0 271 469-753 18-340 (359)
96 2pmi_A Negative RE, cyclin-dep 100.0 5.5E-37 1.9E-41 329.5 22.9 240 473-753 5-285 (317)
97 2owb_A Serine/threonine-protei 100.0 9.4E-37 3.2E-41 330.2 24.9 237 471-753 39-283 (335)
98 2izr_A Casein kinase I isoform 100.0 1.7E-37 5.7E-42 335.0 18.7 243 470-753 6-266 (330)
99 2y94_A 5'-AMP-activated protei 100.0 4E-37 1.4E-41 350.0 22.8 238 469-753 12-258 (476)
100 1luf_A Muscle-specific tyrosin 100.0 3.1E-37 1.1E-41 333.1 20.7 267 469-753 43-320 (343)
101 1mp8_A Focal adhesion kinase 1 100.0 4.6E-37 1.6E-41 323.4 21.4 241 469-753 11-261 (281)
102 1u5q_A Serine/threonine protei 100.0 9.3E-37 3.2E-41 333.1 24.4 234 470-753 51-297 (348)
103 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.9E-37 1.3E-41 347.7 22.2 241 470-753 181-425 (452)
104 3is5_A Calcium-dependent prote 100.0 1.1E-36 3.8E-41 321.7 24.1 242 470-753 19-270 (285)
105 2ivs_A Proto-oncogene tyrosine 100.0 4.9E-37 1.7E-41 327.1 21.5 266 469-753 19-296 (314)
106 1t46_A HOMO sapiens V-KIT hard 100.0 7.1E-37 2.4E-41 325.7 22.7 260 469-753 19-292 (313)
107 3rp9_A Mitogen-activated prote 100.0 6.5E-37 2.2E-41 345.8 23.6 195 470-707 50-280 (458)
108 1opk_A P150, C-ABL, proto-onco 100.0 3.1E-37 1.1E-41 352.6 21.0 241 471-753 218-463 (495)
109 1vzo_A Ribosomal protein S6 ki 100.0 3.7E-37 1.3E-41 336.7 20.6 237 472-753 53-308 (355)
110 3q4u_A Activin receptor type-1 100.0 3.6E-37 1.2E-41 326.2 19.8 241 469-753 4-287 (301)
111 2ac3_A MAP kinase-interacting 100.0 4.5E-37 1.5E-41 328.4 20.7 243 471-753 10-287 (316)
112 1qpc_A LCK kinase; alpha beta 100.0 8.3E-37 2.9E-41 320.5 22.3 242 469-753 9-254 (279)
113 3hko_A Calcium/calmodulin-depe 100.0 3.4E-37 1.2E-41 333.4 19.8 273 469-753 22-322 (345)
114 2vgo_A Serine/threonine-protei 100.0 1.7E-36 5.7E-41 319.4 24.5 235 472-753 13-254 (284)
115 3tt0_A Basic fibroblast growth 100.0 1.3E-36 4.5E-41 335.4 24.8 258 469-753 65-337 (382)
116 2zmd_A Dual specificity protei 100.0 1.2E-36 4.2E-41 337.1 24.5 237 471-753 54-312 (390)
117 4e5w_A Tyrosine-protein kinase 100.0 5.9E-37 2E-41 325.0 20.9 240 472-753 20-287 (302)
118 3bhy_A Death-associated protei 100.0 2.1E-36 7.2E-41 317.7 24.4 237 472-753 4-257 (283)
119 3poz_A Epidermal growth factor 100.0 6.2E-37 2.1E-41 330.6 20.7 239 472-753 14-263 (327)
120 3brb_A Proto-oncogene tyrosine 100.0 1.3E-36 4.3E-41 324.8 22.6 249 468-753 29-293 (313)
121 3cok_A Serine/threonine-protei 100.0 3.9E-37 1.3E-41 322.8 18.3 236 473-753 11-254 (278)
122 1p4o_A Insulin-like growth fac 100.0 9.4E-37 3.2E-41 326.8 21.5 252 469-753 21-284 (322)
123 3pls_A Macrophage-stimulating 100.0 2.3E-36 7.8E-41 319.6 24.2 240 473-753 21-272 (298)
124 2eva_A TAK1 kinase - TAB1 chim 100.0 1.3E-36 4.3E-41 325.3 22.4 234 473-753 8-248 (307)
125 1mqb_A Ephrin type-A receptor 100.0 2.1E-36 7.2E-41 327.5 24.3 244 469-753 40-294 (333)
126 3kfa_A Tyrosine-protein kinase 100.0 8.5E-37 2.9E-41 321.6 20.4 243 469-753 9-256 (288)
127 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6E-37 2E-41 331.0 19.7 239 470-753 31-310 (329)
128 3llt_A Serine/threonine kinase 100.0 1E-36 3.4E-41 332.3 21.6 204 467-716 29-263 (360)
129 3ttj_A Mitogen-activated prote 100.0 7.4E-37 2.5E-41 346.8 21.2 196 470-715 59-266 (464)
130 1u59_A Tyrosine-protein kinase 100.0 1.9E-36 6.4E-41 319.7 22.8 238 473-753 9-257 (287)
131 2h6d_A 5'-AMP-activated protei 100.0 1.7E-36 5.8E-41 317.3 22.2 238 469-753 7-253 (276)
132 3q5i_A Protein kinase; CDPK, m 100.0 2.9E-36 9.9E-41 345.0 25.9 239 469-753 32-293 (504)
133 3f66_A Hepatocyte growth facto 100.0 2E-36 6.7E-41 320.7 22.6 241 472-753 24-276 (298)
134 3uzp_A CKI-delta, CKID, casein 100.0 1.6E-36 5.5E-41 320.4 21.9 242 469-753 5-265 (296)
135 2rio_A Serine/threonine-protei 100.0 1E-36 3.6E-41 342.4 21.3 252 469-753 11-287 (434)
136 3p23_A Serine/threonine-protei 100.0 6.7E-37 2.3E-41 344.1 19.7 241 473-753 24-275 (432)
137 3op5_A Serine/threonine-protei 100.0 7.7E-37 2.6E-41 334.7 19.7 243 470-753 32-314 (364)
138 3n9x_A Phosphotransferase; mal 100.0 3.8E-36 1.3E-40 337.6 25.7 196 469-707 22-248 (432)
139 2v62_A Serine/threonine-protei 100.0 6.3E-37 2.1E-41 333.0 18.8 242 470-753 34-313 (345)
140 3soc_A Activin receptor type-2 100.0 4.9E-37 1.7E-41 330.7 17.6 236 472-753 23-303 (322)
141 2qkw_B Protein kinase; three-h 100.0 9.4E-38 3.2E-42 335.3 11.9 245 469-753 35-300 (321)
142 3fme_A Dual specificity mitoge 100.0 1.4E-36 4.8E-41 319.9 20.6 240 471-753 5-258 (290)
143 2jam_A Calcium/calmodulin-depe 100.0 2.4E-36 8.2E-41 321.6 22.5 239 469-753 5-253 (304)
144 2h8h_A Proto-oncogene tyrosine 100.0 9.9E-37 3.4E-41 351.7 20.9 241 470-753 264-508 (535)
145 4hgt_A Casein kinase I isoform 100.0 1.2E-36 4E-41 321.1 19.7 242 469-753 5-265 (296)
146 2i1m_A Macrophage colony-stimu 100.0 1.3E-36 4.4E-41 327.6 20.3 255 470-753 43-311 (333)
147 3dls_A PAS domain-containing s 100.0 5.9E-37 2E-41 332.6 17.6 232 470-753 21-266 (335)
148 3lxl_A Tyrosine-protein kinase 100.0 1.6E-36 5.4E-41 326.6 20.8 240 472-753 22-288 (327)
149 3mi9_A Cell division protein k 100.0 3E-36 1E-40 327.7 23.2 239 472-753 16-303 (351)
150 4agu_A Cyclin-dependent kinase 100.0 3.3E-36 1.1E-40 320.9 22.9 235 473-753 3-276 (311)
151 3mwu_A Calmodulin-domain prote 100.0 3.4E-36 1.2E-40 342.7 24.5 238 470-753 19-268 (486)
152 1xbb_A Tyrosine-protein kinase 100.0 2.6E-36 8.7E-41 319.4 21.8 239 472-753 15-264 (291)
153 2i6l_A Mitogen-activated prote 100.0 4.5E-36 1.5E-40 319.8 23.6 242 468-753 6-297 (320)
154 3uim_A Brassinosteroid insensi 100.0 7.2E-38 2.5E-42 336.4 9.6 244 469-753 26-296 (326)
155 2h34_A Serine/threonine-protei 100.0 2.1E-36 7.3E-41 323.5 21.0 237 472-753 33-280 (309)
156 1j1b_A Glycogen synthase kinas 100.0 2.6E-36 8.9E-41 337.8 22.6 239 471-753 52-328 (420)
157 2a19_B Interferon-induced, dou 100.0 1.8E-36 6.1E-41 317.8 20.0 236 469-753 7-259 (284)
158 3com_A Serine/threonine-protei 100.0 6.1E-36 2.1E-40 319.3 24.3 240 469-753 25-270 (314)
159 1rjb_A FL cytokine receptor; k 100.0 2.3E-36 7.7E-41 327.1 21.2 265 469-753 41-319 (344)
160 3dtc_A Mitogen-activated prote 100.0 2.9E-36 1E-40 314.7 21.3 235 472-753 6-258 (271)
161 3mtl_A Cell division protein k 100.0 1.3E-36 4.6E-41 327.5 19.2 235 473-753 2-273 (324)
162 3c1x_A Hepatocyte growth facto 100.0 1.3E-36 4.3E-41 335.3 19.3 240 473-753 89-340 (373)
163 3lij_A Calcium/calmodulin depe 100.0 4.5E-36 1.6E-40 342.5 24.4 239 469-753 33-283 (494)
164 3rgf_A Cyclin-dependent kinase 100.0 8.5E-37 2.9E-41 339.4 17.9 213 469-714 16-238 (405)
165 3qyz_A Mitogen-activated prote 100.0 7.2E-36 2.5E-40 327.0 24.8 239 470-753 24-305 (364)
166 3nyv_A Calmodulin-domain prote 100.0 1.9E-36 6.4E-41 344.3 20.8 239 469-753 22-273 (484)
167 2w5a_A Serine/threonine-protei 100.0 2E-36 6.9E-41 317.3 19.4 241 472-753 5-259 (279)
168 3kex_A Receptor tyrosine-prote 100.0 1.2E-36 4E-41 327.9 18.1 239 472-753 12-261 (325)
169 3kvw_A DYRK2, dual specificity 100.0 3.7E-36 1.2E-40 337.6 22.8 203 468-716 92-303 (429)
170 3lb7_A RAF proto-oncogene seri 100.0 4.3E-36 1.5E-40 321.5 22.2 238 470-753 33-285 (307)
171 2pvf_A Fibroblast growth facto 100.0 6E-36 2E-40 323.3 23.4 257 470-753 32-303 (334)
172 3cc6_A Protein tyrosine kinase 100.0 5.2E-36 1.8E-40 315.1 22.1 238 471-753 10-258 (281)
173 2ozo_A Tyrosine-protein kinase 100.0 2.4E-36 8.4E-41 353.9 21.7 238 474-753 336-583 (613)
174 3an0_A Dual specificity mitoge 100.0 3.1E-36 1.1E-40 325.8 20.8 242 469-753 47-302 (340)
175 2y7j_A Phosphorylase B kinase 100.0 1.2E-35 4E-40 326.2 25.5 238 469-753 90-351 (365)
176 3lxp_A Non-receptor tyrosine-p 100.0 2.7E-36 9.2E-41 324.1 20.0 236 474-753 32-295 (318)
177 1byg_A CSK, protein (C-termina 100.0 2.4E-36 8.3E-41 317.1 19.1 236 472-753 20-258 (278)
178 3kmu_A ILK, integrin-linked ki 100.0 3.6E-36 1.2E-40 312.9 20.1 232 472-753 9-255 (271)
179 3a7i_A MST3 kinase, serine/thr 100.0 1.1E-35 3.7E-40 316.1 24.1 235 472-753 21-262 (303)
180 3i6u_A CDS1, serine/threonine- 100.0 2.5E-36 8.5E-41 337.8 20.0 240 468-753 130-391 (419)
181 2xrw_A Mitogen-activated prote 100.0 6.1E-36 2.1E-40 328.8 22.6 197 470-716 22-230 (371)
182 1cm8_A Phosphorylated MAP kina 100.0 6.3E-36 2.2E-40 328.7 22.7 233 470-753 22-299 (367)
183 2yfx_A Tyrosine-protein kinase 100.0 2.6E-36 9E-41 324.9 19.0 250 470-753 27-289 (327)
184 3lzb_A Epidermal growth factor 100.0 6.3E-36 2.2E-40 323.1 21.9 239 472-753 14-263 (327)
185 3eb0_A Putative uncharacterize 100.0 4.6E-36 1.6E-40 331.0 21.2 240 470-753 4-313 (383)
186 2jii_A Serine/threonine-protei 100.0 2.4E-36 8.1E-41 329.1 18.7 240 472-753 41-321 (352)
187 1t4h_A Serine/threonine-protei 100.0 1.3E-35 4.4E-40 313.5 23.7 237 469-753 22-274 (290)
188 3mdy_A Bone morphogenetic prot 100.0 2.4E-36 8.3E-41 325.0 18.4 242 469-753 33-316 (337)
189 2b9h_A MAP kinase FUS3, mitoge 100.0 1.2E-35 3.9E-40 322.4 23.9 240 469-753 7-297 (353)
190 2yex_A Serine/threonine-protei 100.0 4.4E-36 1.5E-40 313.8 19.8 239 472-753 6-253 (276)
191 3lm5_A Serine/threonine-protei 100.0 4.9E-36 1.7E-40 323.5 20.5 243 469-753 24-279 (327)
192 4f0f_A Serine/threonine-protei 100.0 7.4E-36 2.5E-40 314.6 21.4 235 471-753 17-274 (287)
193 4e7w_A Glycogen synthase kinas 100.0 5.1E-36 1.7E-40 332.5 21.1 243 466-753 33-313 (394)
194 3byv_A Rhoptry kinase; malaria 100.0 4.6E-37 1.6E-41 338.3 12.4 237 471-753 71-351 (377)
195 1phk_A Phosphorylase kinase; g 100.0 2.3E-35 7.9E-40 312.2 25.0 237 470-753 14-275 (298)
196 1ua2_A CAK, cell division prot 100.0 5.5E-36 1.9E-40 325.7 20.6 238 470-753 7-283 (346)
197 3nsz_A CK II alpha, casein kin 100.0 1.2E-35 4.1E-40 319.3 23.0 236 469-753 32-311 (330)
198 3eqc_A Dual specificity mitoge 100.0 6.9E-36 2.4E-40 325.9 21.4 238 468-753 28-316 (360)
199 3g2f_A Bone morphogenetic prot 100.0 2.9E-36 1E-40 324.9 18.2 239 472-753 12-303 (336)
200 3pg1_A Mitogen-activated prote 100.0 8.2E-36 2.8E-40 325.3 21.9 238 469-753 18-308 (362)
201 2xir_A Vascular endothelial gr 100.0 3.9E-36 1.3E-40 320.5 18.8 257 470-753 24-295 (316)
202 2wtk_C Serine/threonine-protei 100.0 8.7E-36 3E-40 316.5 21.2 239 472-753 4-255 (305)
203 2wqm_A Serine/threonine-protei 100.0 8.6E-36 2.9E-40 317.9 21.2 241 471-753 30-282 (310)
204 4eut_A Serine/threonine-protei 100.0 2.4E-36 8.2E-41 335.1 17.3 243 469-753 5-294 (396)
205 4fl3_A Tyrosine-protein kinase 100.0 6.2E-36 2.1E-40 351.7 21.4 233 478-753 374-616 (635)
206 4aaa_A Cyclin-dependent kinase 100.0 9.5E-36 3.2E-40 321.3 21.1 236 472-753 24-298 (331)
207 2pml_X PFPK7, Ser/Thr protein 100.0 4.3E-36 1.5E-40 325.1 18.4 244 469-753 27-314 (348)
208 2w1i_A JAK2; chromosomal rearr 100.0 8.7E-36 3E-40 321.0 20.5 241 471-753 39-307 (326)
209 2clq_A Mitogen-activated prote 100.0 9.4E-36 3.2E-40 314.4 20.2 233 479-753 28-270 (295)
210 1blx_A Cyclin-dependent kinase 100.0 2.5E-35 8.6E-40 315.9 23.8 239 470-753 8-288 (326)
211 2x7f_A TRAF2 and NCK-interacti 100.0 2.3E-35 8E-40 316.5 23.6 241 469-753 20-278 (326)
212 2r3i_A Cell division protein k 100.0 1.5E-35 5.2E-40 313.7 21.7 236 473-753 3-275 (299)
213 2buj_A Serine/threonine-protei 100.0 7.6E-36 2.6E-40 319.0 19.5 243 472-753 28-291 (317)
214 1u46_A ACK-1, activated CDC42 100.0 7.4E-36 2.5E-40 314.5 18.9 240 472-753 17-269 (291)
215 2vwi_A Serine/threonine-protei 100.0 2.7E-36 9.1E-41 319.4 14.9 248 471-753 13-279 (303)
216 4exu_A Mitogen-activated prote 100.0 2.2E-35 7.6E-40 324.4 22.6 233 469-753 38-315 (371)
217 2j7t_A Serine/threonine-protei 100.0 1.5E-35 5.3E-40 314.1 20.6 239 470-753 16-267 (302)
218 2wei_A Calmodulin-domain prote 100.0 2.2E-35 7.5E-40 311.6 21.6 239 469-753 18-268 (287)
219 3og7_A AKAP9-BRAF fusion prote 100.0 1.2E-35 4E-40 314.3 19.4 239 469-753 20-273 (289)
220 3fhr_A MAP kinase-activated pr 100.0 7.1E-36 2.4E-40 323.9 18.1 239 470-753 25-279 (336)
221 2ycf_A Serine/threonine-protei 100.0 1E-35 3.5E-40 319.6 19.2 239 469-753 6-266 (322)
222 1z57_A Dual specificity protei 100.0 1.5E-35 5E-40 318.1 20.3 203 468-716 9-238 (339)
223 2fst_X Mitogen-activated prote 100.0 1.1E-35 3.7E-40 327.1 19.6 234 469-753 25-303 (367)
224 3aln_A Dual specificity mitoge 100.0 1.7E-35 5.8E-40 318.3 20.1 240 472-753 21-277 (327)
225 3ll6_A Cyclin G-associated kin 100.0 2.3E-35 7.8E-40 316.7 20.7 240 472-753 27-293 (337)
226 1fvr_A Tyrosine-protein kinase 100.0 1.6E-35 5.5E-40 318.8 19.1 250 473-753 25-285 (327)
227 3q60_A ROP5B; pseudokinase, tr 100.0 4.2E-36 1.4E-40 329.7 14.8 233 472-753 61-344 (371)
228 2dyl_A Dual specificity mitoge 100.0 7.2E-35 2.4E-39 310.9 23.9 236 472-753 24-275 (318)
229 2nru_A Interleukin-1 receptor- 100.0 1.9E-35 6.4E-40 314.5 19.3 234 478-753 36-291 (307)
230 3cek_A Dual specificity protei 100.0 5.4E-35 1.8E-39 312.4 22.9 239 469-753 24-284 (313)
231 1b6c_B TGF-B superfamily recep 100.0 9.9E-36 3.4E-40 321.2 17.3 241 469-753 38-321 (342)
232 1wak_A Serine/threonine-protei 100.0 1.5E-35 5.1E-40 325.8 18.1 200 469-714 33-295 (397)
233 3coi_A Mitogen-activated prote 100.0 7.8E-35 2.7E-39 317.0 23.0 232 470-753 21-297 (353)
234 3e3p_A Protein kinase, putativ 100.0 5.5E-35 1.9E-39 318.0 21.3 239 471-753 21-306 (360)
235 3gxj_A TGF-beta receptor type- 100.0 1.4E-37 4.7E-42 329.4 0.2 238 472-753 2-282 (303)
236 2vx3_A Dual specificity tyrosi 100.0 8.7E-35 3E-39 320.7 22.5 203 468-716 49-262 (382)
237 2iwi_A Serine/threonine-protei 100.0 2.7E-35 9.3E-40 314.3 16.7 232 469-753 27-275 (312)
238 3sv0_A Casein kinase I-like; t 100.0 6.3E-35 2.2E-39 332.4 20.6 242 469-753 3-263 (483)
239 3a99_A Proto-oncogene serine/t 100.0 3E-35 1E-39 316.4 16.8 234 468-753 38-285 (320)
240 2j0j_A Focal adhesion kinase 1 100.0 1.3E-34 4.4E-39 341.8 22.9 241 469-753 386-636 (656)
241 2eu9_A Dual specificity protei 100.0 1.1E-34 3.9E-39 313.5 20.3 203 468-716 14-243 (355)
242 1zy4_A Serine/threonine-protei 100.0 7.8E-35 2.7E-39 307.4 17.6 238 471-753 4-275 (303)
243 1q8y_A SR protein kinase; tran 100.0 7.9E-35 2.7E-39 317.9 17.6 198 472-715 18-238 (373)
244 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.5E-35 2.9E-39 310.8 13.8 239 470-753 30-287 (319)
245 2pzi_A Probable serine/threoni 100.0 5.5E-34 1.9E-38 337.9 12.3 227 468-753 75-312 (681)
246 3m2w_A MAP kinase-activated pr 100.0 8.2E-33 2.8E-37 294.1 19.8 216 473-753 17-248 (299)
247 3uqc_A Probable conserved tran 100.0 4.7E-33 1.6E-37 295.4 15.5 209 470-753 28-251 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 4.4E-33 1.5E-37 311.0 15.4 237 471-753 76-355 (413)
249 2vuw_A Serine/threonine-protei 100.0 7.6E-34 2.6E-38 307.1 5.4 225 473-749 20-323 (336)
250 3qa8_A MGC80376 protein; kinas 100.0 1E-32 3.5E-37 323.0 11.6 239 473-753 14-289 (676)
251 4azs_A Methyltransferase WBDD; 99.9 1.1E-26 3.7E-31 269.7 4.6 180 479-707 240-434 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.8E-24 1.3E-28 246.8 4.3 182 477-712 340-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 4.1E-21 1.4E-25 203.5 6.5 142 473-684 90-252 (282)
254 1zth_A RIO1 serine protein kin 99.7 2E-17 7E-22 172.5 9.7 139 474-658 48-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.6 1.7E-15 5.8E-20 166.6 5.8 140 474-658 96-265 (397)
256 2be1_A Serine/threonine-protei 99.4 2.4E-12 8.1E-17 139.3 14.8 174 48-237 10-199 (339)
257 3tm0_A Aminoglycoside 3'-phosp 98.9 3.3E-09 1.1E-13 109.5 9.7 75 475-551 16-94 (263)
258 1nd4_A Aminoglycoside 3'-phosp 98.9 2.5E-09 8.7E-14 109.4 7.2 69 482-551 29-99 (264)
259 2hz6_A Endoplasmic reticulum t 98.7 7.2E-08 2.5E-12 105.2 12.1 152 47-231 8-160 (369)
260 3dxp_A Putative acyl-COA dehyd 98.6 9.2E-08 3.2E-12 103.7 8.7 138 478-658 43-249 (359)
261 3sg8_A APH(2'')-ID; antibiotic 98.3 1.3E-07 4.4E-12 100.2 2.6 84 626-712 192-287 (304)
262 3r70_A Aminoglycoside phosphot 97.9 1.9E-05 6.5E-10 84.2 8.7 65 478-551 42-111 (320)
263 3d1u_A Putative fructosamine-3 97.6 0.00023 7.7E-09 75.0 11.5 71 476-551 18-94 (288)
264 3tdw_A Gentamicin resistance p 97.6 0.0002 7E-09 75.8 10.8 68 479-551 25-97 (306)
265 4gkh_A Aminoglycoside 3'-phosp 97.5 0.00029 9.9E-09 72.4 10.1 70 481-551 32-104 (272)
266 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.00094 3.2E-08 71.7 14.0 163 47-230 102-268 (376)
267 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.00073 2.5E-08 72.5 9.2 155 47-230 52-217 (376)
268 2q83_A YTAA protein; 2635576, 97.2 0.0021 7.3E-08 67.9 12.6 44 613-658 197-253 (346)
269 3rgz_A Protein brassinosteroid 97.1 0.00026 8.9E-09 84.5 4.6 63 245-307 639-703 (768)
270 3ovc_A Hygromycin-B 4-O-kinase 97.1 0.001 3.4E-08 72.3 8.4 71 477-551 45-118 (362)
271 3ats_A Putative uncharacterize 97.0 0.001 3.5E-08 71.4 7.5 74 477-551 24-117 (357)
272 1w6s_A Methanol dehydrogenase 97.0 0.0078 2.7E-07 69.8 15.2 110 51-161 124-294 (599)
273 2olc_A MTR kinase, methylthior 96.8 0.0024 8.3E-08 69.7 9.2 71 478-551 35-119 (397)
274 2hz6_A Endoplasmic reticulum t 96.8 0.0012 4E-08 71.7 6.2 149 50-229 51-201 (369)
275 2ad6_A Methanol dehydrogenase 96.8 0.0099 3.4E-07 68.5 14.3 114 47-162 114-289 (571)
276 1kb0_A Quinohemoprotein alcoho 96.8 0.0078 2.7E-07 70.8 13.4 116 47-162 127-300 (677)
277 2pyw_A Uncharacterized protein 96.6 0.004 1.4E-07 68.7 9.1 80 623-707 230-312 (420)
278 3no2_A Uncharacterized protein 96.5 0.018 6.1E-07 59.7 12.7 156 47-230 3-164 (276)
279 3j0a_A TOLL-like receptor 5; m 96.3 0.0033 1.1E-07 75.8 6.4 55 263-317 505-561 (844)
280 3rgz_A Protein brassinosteroid 96.2 0.0024 8.2E-08 76.1 4.6 59 245-303 663-723 (768)
281 2ad6_A Methanol dehydrogenase 96.2 0.01 3.5E-07 68.3 9.7 60 102-163 443-503 (571)
282 3f7w_A Putative fructosamine-3 96.1 0.031 1.1E-06 58.0 11.7 74 473-551 15-94 (288)
283 1yiq_A Quinohemoprotein alcoho 96.1 0.034 1.2E-06 65.5 13.3 115 47-162 120-292 (689)
284 3jr1_A Putative fructosamine-3 95.9 0.0099 3.4E-07 63.2 6.9 72 478-551 41-115 (312)
285 1kb0_A Quinohemoprotein alcoho 95.9 0.014 4.9E-07 68.6 8.9 113 47-162 76-207 (677)
286 1flg_A Protein (quinoprotein e 95.8 0.031 1.1E-06 64.5 11.0 60 102-163 465-525 (582)
287 2be1_A Serine/threonine-protei 95.8 0.0064 2.2E-07 65.4 4.8 113 47-161 110-239 (339)
288 1kv9_A Type II quinohemoprotei 95.7 0.059 2E-06 63.2 13.1 115 47-162 116-287 (668)
289 1zyl_A Hypothetical protein YI 95.7 0.029 1E-06 59.1 9.5 174 479-659 32-225 (328)
290 1yiq_A Quinohemoprotein alcoho 95.6 0.018 6.3E-07 67.8 8.4 113 47-162 69-200 (689)
291 1kv9_A Type II quinohemoprotei 95.5 0.024 8.1E-07 66.5 8.5 113 47-162 65-195 (668)
292 1flg_A Protein (quinoprotein e 95.2 0.039 1.3E-06 63.6 9.1 112 48-161 68-200 (582)
293 3dxq_A Choline/ethanolamine ki 95.1 0.059 2E-06 56.2 9.5 31 626-659 174-204 (301)
294 1w6s_A Methanol dehydrogenase 95.1 0.051 1.8E-06 62.9 9.8 113 48-163 62-200 (599)
295 3csv_A Aminoglycoside phosphot 95.1 0.088 3E-06 55.6 10.9 36 625-660 183-220 (333)
296 1nw1_A Choline kinase (49.2 KD 95.0 0.047 1.6E-06 60.5 8.8 69 478-551 78-156 (429)
297 1w8a_A SLIT protein; signaling 95.0 0.028 9.7E-07 54.6 6.0 48 263-310 79-128 (192)
298 2ppq_A HSK, HK, homoserine kin 94.9 0.067 2.3E-06 56.1 9.3 31 626-658 188-218 (322)
299 3no2_A Uncharacterized protein 94.7 0.047 1.6E-06 56.4 7.1 110 46-161 134-259 (276)
300 3hxj_A Pyrrolo-quinoline quino 94.6 0.059 2E-06 55.7 7.7 144 47-229 29-174 (330)
301 3hxj_A Pyrrolo-quinoline quino 94.3 0.11 3.8E-06 53.5 9.1 104 48-162 107-211 (330)
302 2yle_A Protein spire homolog 1 94.3 0.35 1.2E-05 48.5 11.9 114 599-748 42-156 (229)
303 3i1a_A Spectinomycin phosphotr 94.0 0.28 9.4E-06 52.3 11.6 32 626-659 207-238 (339)
304 1ogq_A PGIP-2, polygalacturona 93.6 0.036 1.2E-06 58.3 3.6 42 262-303 244-287 (313)
305 3g39_A Variable lymphocyte rec 93.6 0.1 3.5E-06 49.6 6.4 51 261-311 29-81 (170)
306 3g39_A Variable lymphocyte rec 93.5 0.1 3.5E-06 49.7 6.3 67 245-311 37-105 (170)
307 3vgz_A Uncharacterized protein 93.3 0.8 2.8E-05 47.1 13.4 111 47-161 195-310 (353)
308 2r9u_A Variable lymphocyte rec 93.2 0.12 4.1E-06 49.4 6.3 49 262-310 33-83 (174)
309 2r9u_A Variable lymphocyte rec 93.1 0.13 4.6E-06 49.1 6.5 67 245-311 40-108 (174)
310 1w8a_A SLIT protein; signaling 92.9 0.1 3.4E-06 50.7 5.2 49 263-311 30-81 (192)
311 2ifg_A High affinity nerve gro 92.7 0.13 4.5E-06 54.4 6.4 49 263-311 32-83 (347)
312 2v70_A SLIT-2, SLIT homolog 2 92.6 0.11 3.7E-06 51.7 5.2 49 263-311 82-132 (220)
313 1ogq_A PGIP-2, polygalacturona 92.5 0.059 2E-06 56.6 3.2 50 262-311 221-271 (313)
314 3feg_A Choline/ethanolamine ki 92.4 0.15 5.2E-06 55.5 6.4 33 626-658 221-255 (379)
315 4fcg_A Uncharacterized protein 92.2 0.087 3E-06 55.8 4.2 49 263-311 230-280 (328)
316 3dsm_A Uncharacterized protein 92.1 1.3 4.4E-05 46.3 13.2 164 49-241 141-324 (328)
317 2ifg_A High affinity nerve gro 91.9 0.14 5E-06 54.1 5.5 43 263-305 57-101 (347)
318 1jmx_B Amine dehydrogenase; ox 91.8 0.3 1E-05 50.3 7.5 110 46-159 9-139 (349)
319 1dce_A Protein (RAB geranylger 91.4 0.12 4.2E-06 59.3 4.4 48 263-311 487-536 (567)
320 4g8a_A TOLL-like receptor 4; l 91.4 0.19 6.4E-06 57.3 6.0 49 263-311 495-545 (635)
321 1pby_B Quinohemoprotein amine 90.9 1.4 4.9E-05 44.7 11.7 109 49-161 2-131 (337)
322 2v70_A SLIT-2, SLIT homolog 2 90.9 0.36 1.2E-05 47.8 6.9 41 264-304 59-101 (220)
323 2qg7_A Ethanolamine kinase PV0 90.8 0.35 1.2E-05 54.0 7.3 69 478-551 113-185 (458)
324 2v9t_B SLIT homolog 2 protein 90.6 0.26 9E-06 48.8 5.5 49 263-311 81-131 (220)
325 2wfh_A SLIT homolog 2 protein 90.3 0.32 1.1E-05 47.2 5.7 48 264-311 56-105 (193)
326 3m19_A Variable lymphocyte rec 90.1 0.38 1.3E-05 48.4 6.3 42 264-305 109-152 (251)
327 2o6r_A Variable lymphocyte rec 90.1 0.43 1.5E-05 45.1 6.3 41 264-304 54-96 (177)
328 3e6j_A Variable lymphocyte rec 90.0 0.38 1.3E-05 47.9 6.1 48 263-311 89-138 (229)
329 2k1k_A Ephrin type-A receptor 89.8 0.12 4.1E-06 37.0 1.6 29 361-389 9-37 (38)
330 3c5i_A Choline kinase; choline 89.6 0.44 1.5E-05 51.0 6.6 30 626-658 213-242 (369)
331 3dsm_A Uncharacterized protein 89.6 0.61 2.1E-05 48.9 7.6 108 49-162 95-220 (328)
332 2ks1_B Epidermal growth factor 89.1 0.18 6E-06 37.3 2.0 6 384-389 32-37 (44)
333 3vgz_A Uncharacterized protein 88.9 0.94 3.2E-05 46.6 8.4 108 52-161 105-222 (353)
334 2l2t_A Receptor tyrosine-prote 88.7 0.14 4.8E-06 37.8 1.2 6 384-389 31-36 (44)
335 4gqb_B Methylosome protein 50; 88.7 0.57 1.9E-05 49.6 6.6 113 46-163 180-298 (344)
336 3oja_A Leucine-rich immune mol 88.5 0.28 9.5E-06 55.0 4.2 28 512-540 325-352 (487)
337 3ow8_A WD repeat-containing pr 88.0 2.3 7.9E-05 44.1 10.7 107 49-160 93-201 (321)
338 2wfh_A SLIT homolog 2 protein 87.9 0.85 2.9E-05 44.1 6.8 54 257-311 26-81 (193)
339 2o6r_A Variable lymphocyte rec 87.6 0.65 2.2E-05 43.9 5.6 52 260-311 26-79 (177)
340 1l0q_A Surface layer protein; 87.0 2.9 9.9E-05 43.8 10.9 107 50-162 88-197 (391)
341 3gre_A Serine/threonine-protei 86.8 2.3 7.9E-05 45.5 10.2 115 46-164 180-303 (437)
342 2v9t_B SLIT homolog 2 protein 86.7 0.85 2.9E-05 45.0 6.1 53 259-311 29-83 (220)
343 3rfs_A Internalin B, repeat mo 86.5 0.93 3.2E-05 46.1 6.5 38 265-302 160-199 (272)
344 2je0_A Acidic leucine-rich nuc 86.5 0.24 8.2E-06 45.4 1.8 45 264-308 66-113 (149)
345 2o6s_A Variable lymphocyte rec 86.0 1.1 3.6E-05 43.5 6.3 38 264-301 102-141 (208)
346 1l0q_A Surface layer protein; 85.6 1.5 5E-05 46.1 7.7 106 52-162 48-155 (391)
347 2z81_A CD282 antigen, TOLL-lik 85.6 0.65 2.2E-05 52.1 5.1 35 263-301 432-467 (549)
348 4fcg_A Uncharacterized protein 85.6 0.46 1.6E-05 50.1 3.6 49 263-311 207-256 (328)
349 1gxr_A ESG1, transducin-like e 85.5 1.6 5.5E-05 44.2 7.7 109 47-161 194-303 (337)
350 1dce_A Protein (RAB geranylger 85.5 0.53 1.8E-05 54.0 4.3 46 263-311 464-511 (567)
351 3bz5_A Internalin-J, INLJ; leu 85.4 0.52 1.8E-05 52.3 4.2 33 264-298 320-353 (457)
352 3e6j_A Variable lymphocyte rec 85.4 1.5 5.3E-05 43.4 7.3 53 259-311 37-91 (229)
353 3m19_A Variable lymphocyte rec 85.1 1.3 4.4E-05 44.4 6.6 44 263-306 36-81 (251)
354 2je0_A Acidic leucine-rich nuc 85.1 0.34 1.2E-05 44.4 2.1 41 263-304 43-84 (149)
355 4gqb_B Methylosome protein 50; 85.0 1.3 4.5E-05 46.7 7.0 110 48-160 139-252 (344)
356 4g56_B MGC81050 protein; prote 84.9 1.5 5.2E-05 46.2 7.4 111 48-161 151-265 (357)
357 1sq9_A Antiviral protein SKI8; 84.4 2.6 8.8E-05 44.1 8.9 107 50-161 199-329 (397)
358 4aow_A Guanine nucleotide-bind 84.3 3.2 0.00011 42.1 9.4 105 47-156 226-339 (340)
359 3sjl_D Methylamine dehydrogena 84.1 1.5 5.2E-05 47.7 7.0 113 45-161 41-176 (386)
360 3ow8_A WD repeat-containing pr 83.9 6.5 0.00022 40.6 11.6 109 47-161 175-286 (321)
361 4glp_A Monocyte differentiatio 83.9 1.2 4E-05 46.3 5.8 42 263-305 225-271 (310)
362 3zyi_A Leucine-rich repeat-con 83.8 0.78 2.7E-05 50.4 4.6 47 264-310 220-268 (452)
363 2ovr_B FBW7, F-BOX/WD repeat p 83.5 4.7 0.00016 43.3 10.8 27 48-74 129-155 (445)
364 4eco_A Uncharacterized protein 83.2 0.65 2.2E-05 53.8 3.9 9 29-37 32-40 (636)
365 2z66_A Variable lymphocyte rec 83.1 1.1 3.7E-05 46.2 5.2 42 264-305 177-220 (306)
366 2o6s_A Variable lymphocyte rec 83.1 1.4 4.7E-05 42.7 5.6 48 263-310 77-126 (208)
367 3zyj_A Leucine-rich repeat-con 82.6 0.94 3.2E-05 49.6 4.7 40 265-304 234-275 (440)
368 3u4y_A Uncharacterized protein 82.6 2.7 9.2E-05 42.8 8.0 109 50-161 12-124 (331)
369 3f2s_A CK, chetk-alpha, cholin 82.6 7.4 0.00025 42.4 11.8 32 626-657 245-280 (401)
370 3cvr_A Invasion plasmid antige 82.6 1.1 3.8E-05 51.4 5.4 36 263-302 121-157 (571)
371 3rfs_A Internalin B, repeat mo 82.5 2.5 8.5E-05 42.9 7.6 41 264-304 111-153 (272)
372 2ell_A Acidic leucine-rich nuc 82.1 0.59 2E-05 43.7 2.4 37 264-301 51-88 (168)
373 4b8c_D Glucose-repressible alc 82.1 1.1 3.9E-05 52.7 5.4 11 286-296 295-305 (727)
374 2ovr_B FBW7, F-BOX/WD repeat p 81.9 5.6 0.00019 42.7 10.5 105 48-161 209-315 (445)
375 3v47_A TOLL-like receptor 5B a 81.9 1.5 5.1E-05 47.8 5.9 48 264-311 325-374 (455)
376 3vl1_A 26S proteasome regulato 81.8 3.8 0.00013 43.2 9.0 100 46-161 107-219 (420)
377 3cvr_A Invasion plasmid antige 81.8 1.2 4.3E-05 50.9 5.4 37 262-302 140-177 (571)
378 2pm9_A Protein WEB1, protein t 81.7 5.9 0.0002 41.5 10.4 101 48-161 178-301 (416)
379 3mes_A Choline kinase; malaria 81.7 6.2 0.00021 43.3 10.8 30 626-658 263-292 (424)
380 4b8c_D Glucose-repressible alc 81.6 1.2 4E-05 52.6 5.3 48 262-311 247-296 (727)
381 3rw6_A Nuclear RNA export fact 81.5 0.86 3E-05 47.0 3.6 38 264-301 198-237 (267)
382 1r5m_A SIR4-interacting protei 81.4 4 0.00014 42.7 8.9 110 47-161 119-243 (425)
383 3odt_A Protein DOA1; ubiquitin 81.4 1.7 5.7E-05 43.6 5.7 103 51-160 198-302 (313)
384 3v47_A TOLL-like receptor 5B a 81.4 1.1 3.7E-05 48.9 4.5 36 265-300 82-119 (455)
385 2ell_A Acidic leucine-rich nuc 81.0 0.71 2.4E-05 43.1 2.5 37 263-299 72-110 (168)
386 1jmx_B Amine dehydrogenase; ox 80.9 2.7 9.2E-05 42.9 7.2 108 50-161 56-182 (349)
387 1a9n_A U2A', U2A'; complex (nu 80.8 0.7 2.4E-05 43.7 2.4 36 263-299 43-79 (176)
388 1p22_A F-BOX/WD-repeat protein 80.8 7.2 0.00025 41.8 10.9 27 134-160 265-291 (435)
389 3c75_H MADH, methylamine dehyd 80.6 2.3 8E-05 46.8 6.9 112 46-161 82-216 (426)
390 2o6q_A Variable lymphocyte rec 80.4 2.4 8.1E-05 42.9 6.5 42 264-305 135-178 (270)
391 2xot_A Amphoterin-induced prot 80.2 1.4 4.7E-05 47.0 4.8 49 263-311 89-139 (361)
392 1ozn_A Reticulon 4 receptor; N 80.1 1.7 5.7E-05 44.3 5.2 49 263-311 154-204 (285)
393 4ery_A WD repeat-containing pr 79.9 4.3 0.00015 41.1 8.3 110 47-161 118-230 (312)
394 1gxr_A ESG1, transducin-like e 79.8 9.6 0.00033 38.2 11.0 111 47-163 108-223 (337)
395 3zyi_A Leucine-rich repeat-con 79.5 2 7E-05 47.0 6.0 43 263-305 243-287 (452)
396 1a9n_A U2A', U2A'; complex (nu 79.5 0.85 2.9E-05 43.1 2.6 51 245-297 49-101 (176)
397 3odt_A Protein DOA1; ubiquitin 79.3 5.6 0.00019 39.6 8.9 107 46-161 153-262 (313)
398 4ezg_A Putative uncharacterize 78.4 0.76 2.6E-05 44.3 1.9 44 264-307 90-135 (197)
399 1pby_B Quinohemoprotein amine 78.4 12 0.00042 37.5 11.2 102 52-161 50-170 (337)
400 2xot_A Amphoterin-induced prot 78.4 2.2 7.6E-05 45.3 5.7 47 263-309 65-113 (361)
401 2ft3_A Biglycan; proteoglycan, 78.4 2.6 8.8E-05 44.0 6.1 42 265-307 220-263 (332)
402 4ecn_A Leucine-rich repeat pro 78.4 0.82 2.8E-05 55.2 2.5 25 285-309 492-516 (876)
403 4aez_A CDC20, WD repeat-contai 78.1 6.1 0.00021 41.9 9.1 112 47-160 271-386 (401)
404 3o53_A Protein LRIM1, AGAP0063 78.1 1.5 5.1E-05 45.7 4.2 34 264-297 193-227 (317)
405 4g56_B MGC81050 protein; prote 77.9 2.2 7.4E-05 45.0 5.4 113 46-163 192-310 (357)
406 1p9a_G Platelet glycoprotein I 77.4 3 0.0001 42.9 6.2 48 263-310 125-174 (290)
407 3vl1_A 26S proteasome regulato 77.3 4.2 0.00014 42.9 7.5 109 47-157 192-325 (420)
408 1jl5_A Outer protein YOPM; leu 77.0 1.8 6E-05 47.9 4.6 42 262-305 131-173 (454)
409 1xeu_A Internalin C; cellular 77.0 2 6.9E-05 43.6 4.7 51 245-299 92-143 (263)
410 1jl5_A Outer protein YOPM; leu 76.8 0.96 3.3E-05 50.1 2.3 56 245-307 324-382 (454)
411 3bws_A Protein LP49; two-domai 76.6 5.4 0.00019 42.3 8.2 110 47-162 180-300 (433)
412 3ei3_B DNA damage-binding prot 76.6 3.4 0.00012 43.2 6.5 109 47-161 216-346 (383)
413 2z66_A Variable lymphocyte rec 76.6 1.9 6.4E-05 44.4 4.4 49 263-311 151-202 (306)
414 3v7d_B Cell division control p 76.3 16 0.00056 39.0 12.1 110 47-163 279-390 (464)
415 1xku_A Decorin; proteoglycan, 76.3 3.4 0.00012 43.0 6.3 42 265-307 219-262 (330)
416 3zwl_B Eukaryotic translation 76.3 9.6 0.00033 38.7 9.8 37 47-83 85-121 (369)
417 4g8a_A TOLL-like receptor 4; l 76.1 2.2 7.6E-05 48.2 5.2 48 259-306 49-98 (635)
418 1xku_A Decorin; proteoglycan, 76.1 3 0.0001 43.3 5.9 56 256-311 46-103 (330)
419 2ynn_A Coatomer subunit beta'; 75.9 4.5 0.00015 41.2 7.0 110 47-161 152-266 (304)
420 4glp_A Monocyte differentiatio 75.8 1.7 6E-05 44.9 3.9 49 263-311 118-172 (310)
421 2z63_A TOLL-like receptor 4, v 75.5 2.4 8.1E-05 47.6 5.1 67 245-311 428-497 (570)
422 4ery_A WD repeat-containing pr 75.3 13 0.00044 37.4 10.4 109 46-160 75-186 (312)
423 3bws_A Protein LP49; two-domai 75.0 5 0.00017 42.6 7.4 109 50-163 225-343 (433)
424 1m9s_A Internalin B; cell inva 74.8 2.1 7E-05 49.5 4.5 36 265-301 134-170 (605)
425 2z62_A TOLL-like receptor 4, v 74.8 2.3 8E-05 42.9 4.5 43 263-305 29-73 (276)
426 4aez_A CDC20, WD repeat-contai 74.8 13 0.00045 39.2 10.6 96 47-160 145-254 (401)
427 1p9a_G Platelet glycoprotein I 74.6 4.4 0.00015 41.6 6.6 49 263-311 101-151 (290)
428 1wwl_A Monocyte differentiatio 74.5 2.6 8.7E-05 43.7 4.8 42 263-305 229-273 (312)
429 2z3z_A Dipeptidyl aminopeptida 74.5 7.6 0.00026 44.6 9.2 106 51-161 94-251 (706)
430 2z63_A TOLL-like receptor 4, v 74.5 3.5 0.00012 46.1 6.2 50 262-311 421-473 (570)
431 3zyj_A Leucine-rich repeat-con 74.4 3.4 0.00012 45.0 6.0 49 263-311 208-258 (440)
432 2z81_A CD282 antigen, TOLL-lik 74.4 2.1 7.2E-05 47.8 4.4 49 263-311 75-126 (549)
433 3hfq_A Uncharacterized protein 74.4 4.6 0.00016 41.6 6.8 17 144-160 309-325 (347)
434 2aq5_A Coronin-1A; WD40 repeat 74.3 6.6 0.00023 41.5 8.1 106 48-157 144-257 (402)
435 1vyh_C Platelet-activating fac 74.3 11 0.00037 40.3 9.9 115 47-164 203-338 (410)
436 3t6q_A CD180 antigen; protein- 74.2 2.2 7.6E-05 48.4 4.5 44 264-307 83-128 (606)
437 1xeu_A Internalin C; cellular 73.8 2.3 7.7E-05 43.2 4.0 52 245-299 70-121 (263)
438 3a79_B TLR6, VLRB.59, TOLL-lik 73.7 2.8 9.5E-05 47.3 5.2 64 245-311 38-103 (562)
439 2z80_A TOLL-like receptor 2, v 73.6 2.6 8.7E-05 44.4 4.5 76 233-311 25-103 (353)
440 2id5_A Lingo-1, leucine rich r 73.6 2 6.7E-05 47.3 3.8 46 264-309 250-297 (477)
441 4eco_A Uncharacterized protein 73.5 3.1 0.00011 48.0 5.6 47 263-311 489-539 (636)
442 2z7x_B TOLL-like receptor 1, v 73.5 1.6 5.5E-05 48.6 3.1 35 264-298 92-129 (520)
443 3oja_A Leucine-rich immune mol 73.4 1.9 6.6E-05 48.0 3.7 39 263-302 59-98 (487)
444 3vq2_A TLR4, TOLL-like recepto 72.7 2.7 9.1E-05 47.7 4.7 47 264-310 82-130 (606)
445 1o6v_A Internalin A; bacterial 72.7 2.6 9E-05 46.3 4.5 52 245-299 294-346 (466)
446 2z7x_B TOLL-like receptor 1, v 72.6 2 6.7E-05 47.9 3.5 50 262-311 21-72 (520)
447 4ay9_X Follicle-stimulating ho 72.3 2.8 9.5E-05 44.3 4.4 46 257-303 25-73 (350)
448 3v7d_B Cell division control p 72.2 7.7 0.00026 41.7 8.1 106 47-161 321-428 (464)
449 3oja_B Anopheles plasmodium-re 72.1 3.6 0.00012 46.9 5.7 47 264-310 125-173 (597)
450 1wwl_A Monocyte differentiatio 71.9 1.6 5.6E-05 45.2 2.5 25 285-309 150-174 (312)
451 1ozn_A Reticulon 4 receptor; N 71.8 4 0.00014 41.4 5.4 42 264-305 131-174 (285)
452 2aq5_A Coronin-1A; WD40 repeat 71.5 15 0.0005 38.7 10.0 111 47-161 93-214 (402)
453 1sq9_A Antiviral protein SKI8; 71.1 11 0.00039 39.0 8.9 110 46-161 135-274 (397)
454 3iz6_a 40S ribosomal protein R 71.1 15 0.0005 38.7 9.9 101 47-162 169-288 (380)
455 2ft3_A Biglycan; proteoglycan, 71.0 2.9 0.0001 43.6 4.2 52 260-311 52-105 (332)
456 1got_B GT-beta; complex (GTP-b 70.9 20 0.00069 36.8 10.7 110 50-165 156-268 (340)
457 4ezg_A Putative uncharacterize 70.7 4 0.00014 39.1 4.8 49 262-311 66-115 (197)
458 1got_B GT-beta; complex (GTP-b 70.5 17 0.0006 37.3 10.1 112 47-164 195-312 (340)
459 3j0a_A TOLL-like receptor 5; m 70.4 2.9 9.8E-05 50.0 4.5 38 265-302 126-166 (844)
460 2o6q_A Variable lymphocyte rec 70.3 4.9 0.00017 40.5 5.6 49 263-311 110-160 (270)
461 3lrv_A PRE-mRNA-splicing facto 69.9 16 0.00054 37.6 9.6 101 47-160 138-250 (343)
462 2ojh_A Uncharacterized protein 69.7 6.8 0.00023 38.3 6.4 101 55-160 19-125 (297)
463 3zwl_B Eukaryotic translation 69.6 9.4 0.00032 38.8 7.7 35 47-81 229-263 (369)
464 3i2n_A WD repeat-containing pr 69.6 15 0.00053 37.1 9.4 112 46-158 178-295 (357)
465 1r5m_A SIR4-interacting protei 69.3 5.1 0.00017 41.8 5.7 111 47-161 160-285 (425)
466 1m9s_A Internalin B; cell inva 69.2 3 0.0001 48.0 4.1 52 245-299 138-190 (605)
467 2pbi_B Guanine nucleotide-bind 69.1 12 0.0004 39.1 8.5 113 48-164 210-326 (354)
468 2z62_A TOLL-like receptor 4, v 69.0 4.7 0.00016 40.6 5.2 67 245-311 35-103 (276)
469 3bz5_A Internalin-J, INLJ; leu 68.6 3.6 0.00012 45.4 4.5 35 264-300 214-249 (457)
470 1qks_A Cytochrome CD1 nitrite 68.5 18 0.00061 41.1 10.4 140 11-161 123-282 (567)
471 1h6t_A Internalin B; cell adhe 68.5 3.7 0.00013 42.2 4.3 37 264-301 136-173 (291)
472 4a11_B DNA excision repair pro 68.5 20 0.00067 37.0 10.1 107 47-156 111-220 (408)
473 3t6q_A CD180 antigen; protein- 68.5 4.2 0.00015 46.0 5.2 47 264-310 59-107 (606)
474 4a11_B DNA excision repair pro 68.4 5 0.00017 41.7 5.4 111 47-161 55-182 (408)
475 3a79_B TLR6, VLRB.59, TOLL-lik 68.4 7.2 0.00025 43.8 7.1 61 245-305 384-449 (562)
476 3oja_B Anopheles plasmodium-re 68.2 6.8 0.00023 44.6 6.8 49 263-311 100-150 (597)
477 3gre_A Serine/threonine-protei 68.1 7.7 0.00026 41.3 6.9 114 46-160 224-365 (437)
478 3vq2_A TLR4, TOLL-like recepto 67.5 5.7 0.0002 44.9 6.0 48 264-311 58-107 (606)
479 2oiz_A Aromatic amine dehydrog 67.3 7.5 0.00026 41.1 6.5 110 47-160 14-146 (361)
480 2ynn_A Coatomer subunit beta'; 67.3 27 0.00091 35.2 10.6 100 47-158 24-132 (304)
481 1h6t_A Internalin B; cell adhe 67.1 4.1 0.00014 41.8 4.3 52 245-299 141-193 (291)
482 3o6n_A APL1; leucine-rich repe 66.8 6 0.0002 42.1 5.7 42 264-306 119-163 (390)
483 2jwa_A Receptor tyrosine-prote 66.7 2 7E-05 31.5 1.3 13 380-392 30-42 (44)
484 2id5_A Lingo-1, leucine rich r 66.5 5.3 0.00018 43.8 5.3 53 259-311 29-83 (477)
485 1pgu_A Actin interacting prote 66.5 12 0.00039 41.6 8.2 108 48-161 219-335 (615)
486 3g06_A SSPH2 (leucine-rich rep 66.4 4.2 0.00014 47.0 4.5 31 264-297 223-254 (622)
487 1vyh_C Platelet-activating fac 66.2 20 0.00067 38.2 9.7 98 48-161 120-230 (410)
488 4ecn_A Leucine-rich repeat pro 66.1 3.2 0.00011 50.1 3.6 41 264-307 550-594 (876)
489 3g06_A SSPH2 (leucine-rich rep 65.6 2.6 9E-05 48.7 2.7 43 263-309 242-285 (622)
490 1o6v_A Internalin A; bacterial 65.5 3.9 0.00013 44.9 4.0 62 245-311 316-378 (466)
491 3dw8_B Serine/threonine-protei 65.5 10 0.00036 40.1 7.3 107 48-161 239-380 (447)
492 4e54_B DNA damage-binding prot 65.4 11 0.00039 40.3 7.6 108 45-155 129-241 (435)
493 3o6n_A APL1; leucine-rich repe 65.0 3.5 0.00012 43.9 3.4 49 262-311 226-275 (390)
494 4fmz_A Internalin; leucine ric 64.7 3.6 0.00012 42.9 3.3 46 263-309 266-312 (347)
495 3c5m_A Oligogalacturonate lyas 64.4 7.3 0.00025 40.5 5.7 107 55-162 165-281 (396)
496 3nok_A Glutaminyl cyclase; bet 64.1 9.8 0.00034 39.1 6.3 98 56-163 114-219 (268)
497 3i2n_A WD repeat-containing pr 63.8 7.2 0.00025 39.7 5.4 112 46-160 127-249 (357)
498 3k26_A Polycomb protein EED; W 63.7 6.2 0.00021 40.3 4.9 104 49-156 86-194 (366)
499 2hqs_A Protein TOLB; TOLB, PAL 63.5 10 0.00034 40.9 6.7 129 46-177 188-323 (415)
500 1p22_A F-BOX/WD-repeat protein 63.5 25 0.00084 37.5 9.9 106 48-166 266-387 (435)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.7e-48 Score=420.46 Aligned_cols=253 Identities=25% Similarity=0.369 Sum_probs=193.2
Q ss_pred ceEEEeEEecccCceEEEEEEee------CCcEEEEEEeecCCc---hHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~------~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
+++.+.+.||+|+||+||+|... +++.||||+++.... +.+.+|+. +++.++|||||+++|+|.+.+..|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~-il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE-LLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHH-HHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCEEE
Confidence 56788899999999999999753 478999999976542 23445554 889999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
|||| |+++|+|.++|+........... ........++|.++++|+.|||+||+|||
T Consensus 120 lV~E----------y~~~G~L~~~l~~~~~~~~~~~~--------------~~~~~~~~l~~~~~~~i~~qia~gl~yLH 175 (329)
T 4aoj_A 120 MVFE----------YMRHGDLNRFLRSHGPDAKLLAG--------------GEDVAPGPLGLGQLLAVASQVAAGMVYLA 175 (329)
T ss_dssp EEEE----------CCTTCBHHHHHHTSSCC-------------------------CCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------cCCCCcHHHHHHhcCcccccccc--------------cccccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999 88899999999865432211110 01123457999999999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+||||||||+||||+.+ ..+||+|||+|+....... .......+||+.|||||++.+..++.++|||||||+|||
T Consensus 176 ~~~iiHRDLKp~NILl~~~--~~~Ki~DFGla~~~~~~~~-~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~E 252 (329)
T 4aoj_A 176 GLHFVHRDLATRNCLVGQG--LVVKIGDFGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 252 (329)
T ss_dssp HTTCCCSCCCGGGEEEETT--TEEEECCCC-----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCeecccccHhhEEECCC--CcEEEcccccceeccCCCc-ceecCcccccccccChhhhcCCCCCccccccchHHHHHH
Confidence 9999999999999999766 4699999999997654321 222334579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCC-hHHHHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGES-FERDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~-~~~~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+|.+++||.+. .......+.. .....+..+++++.+||.+||++||++|
T Consensus 253 llt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~R 304 (329)
T 4aoj_A 253 IFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQR 304 (329)
T ss_dssp HHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTS
T ss_pred HHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHC
Confidence 999436787664 3344444444 3456778899999999999999999998
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.1e-48 Score=415.61 Aligned_cols=237 Identities=27% Similarity=0.409 Sum_probs=202.9
Q ss_pred ceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecC-----C-chHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKT-----H-HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~-----~-~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
++|++.+.||+|+||+||+|.. .+|+.||||++.+. . .+...+|+. +++.++|||||++++++.+++.+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-VMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 5699999999999999999965 46999999999642 2 234455655 88999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.++|.. ...+++.++..++.||+.||+|||++
T Consensus 111 mE----------y~~gG~L~~~i~~-----------------------------~~~l~e~~~~~~~~qi~~al~ylH~~ 151 (311)
T 4aw0_A 111 LS----------YAKNGELLKYIRK-----------------------------IGSFDETCTRFYTAEIVSALEYLHGK 151 (311)
T ss_dssp EC----------CCTTEEHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred Ee----------cCCCCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 7778888888753 24688899999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
+|+||||||+||||+.++. +||+|||+|+.+.... ......+.+||+.|||||++.+..|+.++||||+||++|||+
T Consensus 152 ~IiHRDlKPeNILl~~~g~--vKl~DFGla~~~~~~~-~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml 228 (311)
T 4aw0_A 152 GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPES-KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228 (311)
T ss_dssp TEECSCCSGGGEEECTTSC--EEECCCTTCEECCTTT-TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCHHHeEEcCCCC--EEEEEcCCceecCCCC-CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999987765 9999999999875432 223345678999999999999999999999999999999999
Q ss_pred hCCCCCCCC-ChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~-~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|| .+||.+ +.......+......++..+++++++||++||++||++|
T Consensus 229 ~G-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R 276 (311)
T 4aw0_A 229 AG-LPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKR 276 (311)
T ss_dssp HS-SCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHSCSSGGGS
T ss_pred hC-CCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHHHccCCHhHC
Confidence 99 667755 455556667777778889999999999999999999998
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.7e-48 Score=417.67 Aligned_cols=252 Identities=25% Similarity=0.380 Sum_probs=199.0
Q ss_pred cceEEEeEEecccCceEEEEEEee------CCcEEEEEEeecCCc---hHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~------~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
.++|.+.+.||+|+||+||+|... +++.||||+++.... +.+.+|+. +++.++|||||+++|+|.+++..
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~-il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAE-LLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHH-HHHhCCCCCCccEEEEEeeCCEE
Confidence 356889999999999999999753 478999999976542 23445554 88999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
||||| |+++|+|.++|+.......... .......++|.++++|+.|||+||+||
T Consensus 91 ~lV~E----------y~~~G~L~~~l~~~~~~~~~~~----------------~~~~~~~l~~~~~~~i~~qia~gl~yL 144 (299)
T 4asz_A 91 IMVFE----------YMKHGDLNKFLRAHGPDAVLMA----------------EGNPPTELTQSQMLHIAQQIAAGMVYL 144 (299)
T ss_dssp EEEEE----------CCTTCBHHHHHHHTSHHHHHC--------------------CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE----------cCCCCcHHHHHHhcCccccccc----------------ccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 8889999999976532110000 001235699999999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
|+++|+||||||+||||+.++ .+||+|||+|+....... ........||+.|||||++.+..|+.++|||||||++|
T Consensus 145 H~~~iiHRDlKp~NILl~~~~--~~Ki~DFGla~~~~~~~~-~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~ 221 (299)
T 4asz_A 145 ASQHFVHRDLATRNCLVGENL--LVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW 221 (299)
T ss_dssp HHTTCCCSCCSGGGEEECGGG--CEEECCCSCHHHHTGGGC-EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCccCHhhEEECCCC--cEEECCcccceecCCCCc-eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHH
Confidence 999999999999999997664 599999999987654321 12223345899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCC-hHHHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGES-FERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~-~~~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+|++++||.+. ..+....+..+ ....+..+++++.+||.+||++||++|
T Consensus 222 Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~R 274 (299)
T 4asz_A 222 EIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMR 274 (299)
T ss_dssp HHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHC
Confidence 9999447788665 33444444444 456778899999999999999999998
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.3e-48 Score=417.11 Aligned_cols=255 Identities=21% Similarity=0.296 Sum_probs=200.0
Q ss_pred ceEEEeEEecccCceEEEEEEe------eCCcEEEEEEeecCC---chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~------~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
..+++.+.||+|+||+||+|.. .+++.||||+++... ..+.+.++..+++.++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 4567889999999999999975 357899999996532 2233444444889999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
|||| |+++|+|.++|+.......... ..........++|.++++|+.|||+||+|||
T Consensus 106 lV~E----------y~~~G~L~~~L~~~~~~~~~~~-------------~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH 162 (308)
T 4gt4_A 106 MIFS----------YCSHGDLHEFLVMRSPHSDVGS-------------TDDDRTVKSALEPPDFVHLVAQIAAGMEYLS 162 (308)
T ss_dssp EEEE----------CCSSCBHHHHHHTTCSSCCCC------------------CCEECCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------cCCCCcHHHHHHhhCccccccc-------------cccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 8889999999976543221100 0000122456999999999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+++||||||||+||||+.+ +.+||+|||+|+...... ........+||+.|||||++.++.|+.++|||||||+|||
T Consensus 163 ~~~iiHRDLK~~NILl~~~--~~~Ki~DFGlar~~~~~~-~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~E 239 (308)
T 4gt4_A 163 SHHVVHKDLATRNVLVYDK--LNVKISDLGLFREVYAAD-YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWE 239 (308)
T ss_dssp HTTCCCSCCSGGGEEECGG--GCEEECCSCCBCGGGGGG-CBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred hCCCCCCCccccceEECCC--CCEEECCcccceeccCCC-ceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHH
Confidence 9999999999999999766 459999999998765432 1222345579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+|++.+||.+... .....+..+ ..+.+..+++++.+||.+||+.||++|
T Consensus 240 l~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~R 291 (308)
T 4gt4_A 240 VFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRR 291 (308)
T ss_dssp HHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHC
Confidence 99944778876543 344444443 345677889999999999999999998
No 5
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.6e-47 Score=403.30 Aligned_cols=233 Identities=24% Similarity=0.349 Sum_probs=183.0
Q ss_pred ceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
++|++.+.||+|+||+||+|.. .+|+.||||++.+.. .....+|+. +++.++|||||++++++.+++..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREIS-YLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHH-HHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4689999999999999999976 469999999996532 123455665 78999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
||||++ +|.+++. +...+++.++..++.||+.||+|||++
T Consensus 92 mEy~~g-----------~L~~~l~-----------------------------~~~~l~e~~~~~~~~qi~~al~ylH~~ 131 (275)
T 3hyh_A 92 IEYAGN-----------ELFDYIV-----------------------------QRDKMSEQEARRFFQQIISAVEYCHRH 131 (275)
T ss_dssp EECCCE-----------EHHHHHH-----------------------------HSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCC-----------CHHHHHH-----------------------------HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 996654 4444442 234688899999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-CchhhHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFC 704 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDIwSfGvvL~El 704 (753)
+|+||||||+|||++.++. +||+|||+|+..... ....+.+||+.|||||++.+..+ +.++|||||||++|||
T Consensus 132 ~IiHRDiKP~NILl~~~~~--vkl~DFGla~~~~~~----~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~l 205 (275)
T 3hyh_A 132 KIVHRDLKPENLLLDEHLN--VKIADFGLSNIMTDG----NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 205 (275)
T ss_dssp TCCCCCCCTTTEEECTTCC--EEECCSSCC-------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHH
T ss_pred CcccccCChHHeEECCCCC--EEEeecCCCeecCCC----CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHH
Confidence 9999999999999977765 999999999876532 22345689999999999998886 6899999999999999
Q ss_pred HhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 ITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|| ++||.+. .......+......++..+++++++||++||++||++|
T Consensus 206 ltg-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R 254 (275)
T 3hyh_A 206 LCR-RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNR 254 (275)
T ss_dssp HHS-SCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCChhHC
Confidence 999 6677654 44555667777778888999999999999999999998
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3e-47 Score=414.71 Aligned_cols=235 Identities=25% Similarity=0.419 Sum_probs=196.3
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC---CchHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~---~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
.+.|++.+.||+|+||+||+|... +|+.||||++... ..+...+|+. +++.++|||||++++++.+++.+|||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~-il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-IMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 356888999999999999999765 6999999999643 2334566766 7899999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+++|+|.+++.. ..+++.++..|+.||+.||+|||+++|
T Consensus 152 ----------y~~gg~L~~~l~~------------------------------~~l~e~~~~~~~~qi~~aL~ylH~~~I 191 (346)
T 4fih_A 152 ----------FLEGGALTDIVTH------------------------------TRMNEEQIAAVCLAVLQALSVLHAQGV 191 (346)
T ss_dssp ----------CCTTEEHHHHHHH------------------------------SCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------CCCCCcHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 6677888877642 357888999999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG 707 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG 707 (753)
|||||||+||||+.++. +||+|||+|+.+.... ....+.+||+.|||||++.+..|+.++|||||||++|||+||
T Consensus 192 iHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~---~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G 266 (346)
T 4fih_A 192 IHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEV---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266 (346)
T ss_dssp ECCCCSGGGEEECTTCC--EEECCCTTCEECCSSS---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred ccccCCHHHEEECCCCC--EEEecCcCceecCCCC---CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHC
Confidence 99999999999987765 9999999999875432 233567899999999999999999999999999999999999
Q ss_pred CCCCCCCC-hHHHHHHHHccCc---ccccCCCHHHHHHHHHccccCcCCC
Q 004442 708 GKHPYGES-FERDANIVKDRKD---LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 708 ~~~Pf~~~-~~~~~~~i~~~~~---~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.+||.+. .......+..... ..+..+++++++||.+||.+||++|
T Consensus 267 -~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R 315 (346)
T 4fih_A 267 -EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 315 (346)
T ss_dssp -SCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred -CCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHC
Confidence 6677554 3444444444332 2345689999999999999999998
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8.1e-48 Score=419.81 Aligned_cols=237 Identities=24% Similarity=0.390 Sum_probs=191.6
Q ss_pred ceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
++|++.+.||+|+||+||+|.. .+|+.||||++..... +.+.+|+. +++.++|||||++++++.+++.+||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~-il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA-VLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHH-HHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 5799999999999999999976 4699999999975431 23445555 889999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+++|+|.++|...+ ...+++.+++.|+.||+.||+|||+++
T Consensus 103 E----------y~~gg~L~~~i~~~~---------------------------~~~~~e~~~~~~~~qi~~aL~ylH~~~ 145 (350)
T 4b9d_A 103 D----------YCEGGDLFKRINAQK---------------------------GVLFQEDQILDWFVQICLALKHVHDRK 145 (350)
T ss_dssp E----------CCTTCBHHHHHHHTT---------------------------TCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred e----------CCCCCcHHHHHHHcC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9 777889988886432 245688889999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
||||||||+||||+.++. +||+|||+|+..... .......+||+.|||||++.+..|+.++|||||||++|||+|
T Consensus 146 IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~---~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemlt 220 (350)
T 4b9d_A 146 ILHRDIKSQNIFLTKDGT--VQLGDFGIARVLNST---VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220 (350)
T ss_dssp CEETTCCGGGEEECTTCC--EEECSTTEESCCCHH---HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred eeeccCCHHHEEECCCCC--EEEcccccceeecCC---cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999988765 999999999876432 122344579999999999999999999999999999999999
Q ss_pred CCCCCCCCCh-HHHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~-~~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| ++||.+.. ......+... .++.+..+++++++||.+||++||++|
T Consensus 221 G-~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 268 (350)
T 4b9d_A 221 L-KHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDR 268 (350)
T ss_dssp S-SCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred C-CCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHC
Confidence 9 66776553 3444444433 345677889999999999999999998
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.8e-48 Score=412.42 Aligned_cols=235 Identities=26% Similarity=0.358 Sum_probs=195.5
Q ss_pred ceEEEeEEecccCceEEEEEEee----CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~----~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
++|++.+.||+|+||+||+|... .++.||||++.+.. .....+|+. +++.++|||||++++++.+++.+|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD-ILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------C-CCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHH-HHHHCCCCCCCeEEEEEEECCEEE
Confidence 57999999999999999998653 47899999996432 224455554 778999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
|||| |+++|+|.++|.. ...+++.++..++.||+.||+|||
T Consensus 103 ivmE----------y~~gg~L~~~l~~-----------------------------~~~l~e~~~~~~~~qi~~aL~ylH 143 (304)
T 3ubd_A 103 LILD----------FLRGGDLFTRLSK-----------------------------EVMFTEEDVKFYLAELALALDHLH 143 (304)
T ss_dssp EEEC----------CCTTCEEHHHHHH-----------------------------HCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------cCCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 7778888888753 246888999999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+++|+||||||+|||++.++. +||+|||+|+..... .....+.+||+.|||||++.+..|+.++|||||||++||
T Consensus 144 ~~~IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~---~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilye 218 (304)
T 3ubd_A 144 SLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESIDH---EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFE 218 (304)
T ss_dssp HTTCCCSSCCGGGEEECTTSC--EEEESSEEEEC--------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHH
T ss_pred HCCCcCCCCCHHHeEEcCCCC--EEecccccceeccCC---CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHH
Confidence 999999999999999987765 999999999875432 123345789999999999999999999999999999999
Q ss_pred HHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+|| ++||.+. .......+......++..+++++++||++||++||++|
T Consensus 219 mltG-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R 268 (304)
T 3ubd_A 219 MLTG-TLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANR 268 (304)
T ss_dssp HHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHhC-CCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHC
Confidence 9999 6677654 44555666677778888999999999999999999998
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5e-47 Score=411.63 Aligned_cols=238 Identities=23% Similarity=0.292 Sum_probs=194.0
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEcccc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~c~ 550 (753)
.+.|.+.+.||+|+||+||+|... +|+.||||+++.... ..+|+. +++.++|||||++++++.+++.+|||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--~~~E~~-il~~l~HpnIV~l~~~~~~~~~~~ivmE--- 130 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--RVEELV-ACAGLSSPRIVPLYGAVREGPWVNIFME--- 130 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CTHHHH-TTTTCCCTTBCCEEEEEEETTEEEEEEC---
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--HHHHHH-HHHhCCCCCCCcEEEEEEECCEEEEEEe---
Confidence 356888999999999999999764 599999999976532 234555 7899999999999999999999999999
Q ss_pred CChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCcccc
Q 004442 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (753)
Q Consensus 551 ~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHr 630 (753)
|+++|+|.++|+. ...+++.++..++.||+.||+|||+++||||
T Consensus 131 -------y~~gg~L~~~l~~-----------------------------~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHR 174 (336)
T 4g3f_A 131 -------LLEGGSLGQLIKQ-----------------------------MGCLPEDRALYYLGQALEGLEYLHTRRILHG 174 (336)
T ss_dssp -------CCTTCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHTTTEECS
T ss_pred -------ccCCCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 7778999988853 2458899999999999999999999999999
Q ss_pred CCCCCcEEEecCCCCeEEEEeccCceeccCCCccc--ccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCC
Q 004442 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL--TQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 708 (753)
Q Consensus 631 DLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~ 708 (753)
||||+||||+.++. .+||+|||+|+.+....... ......+||+.|||||++.+..|+.++|||||||++|||+||
T Consensus 175 DlKp~NILl~~~g~-~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG- 252 (336)
T 4g3f_A 175 DVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG- 252 (336)
T ss_dssp CCCGGGEEECTTSC-CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-
T ss_pred ccCHHHEEEeCCCC-EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHC-
Confidence 99999999987762 49999999999876432211 123446799999999999999999999999999999999999
Q ss_pred CCCCCCC-hHHHHHHHHccCc---ccccCCCHHHHHHHHHccccCcCCC
Q 004442 709 KHPYGES-FERDANIVKDRKD---LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 709 ~~Pf~~~-~~~~~~~i~~~~~---~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++||.+. .......+..... ..+..+++++.+||.+||++||++|
T Consensus 253 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 301 (336)
T 4g3f_A 253 CHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHR 301 (336)
T ss_dssp SCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred cCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHC
Confidence 6777654 3333344444332 3466789999999999999999998
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-46 Score=399.01 Aligned_cols=233 Identities=26% Similarity=0.365 Sum_probs=187.3
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccC----Cce
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD----QDF 541 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~----~~~ 541 (753)
++.+++.+.||+|+||+||+|... +++.||||++..... +.+.+|+ .+++.++|||||+++++|.+ ++.
T Consensus 25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~-~il~~l~HpnIV~~~~~~~~~~~~~~~ 103 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEA-EMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEEEEEETTEEE
T ss_pred CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHH-HHHHhCCCCCCCcEEEEEeeccCCCcE
Confidence 344578889999999999999764 589999999965321 2334455 48899999999999999864 456
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
+||||| |+++|+|.++|+. ...+++..+..|+.||+.||+|
T Consensus 104 ~~lvmE----------y~~gg~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~y 144 (290)
T 3fpq_A 104 IVLVTE----------LMTSGTLKTYLKR-----------------------------FKVMKIKVLRSWCRQILKGLQF 144 (290)
T ss_dssp EEEEEE----------CCCSCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEe----------CCCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 899999 7778999988853 2457889999999999999999
Q ss_pred hhhCC--ccccCCCCCcEEEec-CCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 622 LHEIG--LIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 622 LH~~~--IiHrDLKp~NILL~~-d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
||+++ ||||||||+||||+. ++ .+||+|||+|+..... ...+.+||+.|||||++.+ .|+.++||||||
T Consensus 145 lH~~~~~IiHRDlKp~NILl~~~~g--~vKl~DFGla~~~~~~-----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlG 216 (290)
T 3fpq_A 145 LHTRTPPIIHRDLKCDNIFITGPTG--SVKIGDLGLATLKRAS-----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFG 216 (290)
T ss_dssp HHTSSSCCCCCCCCGGGEEESSTTS--CEEECCTTGGGGCCTT-----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHH
T ss_pred HHHCCCCEEecccChhheeEECCCC--CEEEEeCcCCEeCCCC-----ccCCcccCccccCHHHcCC-CCCcHHHHHHHH
Confidence 99998 999999999999964 44 4999999999864332 2345689999999998865 699999999999
Q ss_pred HHHHHHHhCCCCCCCCC-h-HHHHHHHHccCc--ccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGES-F-ERDANIVKDRKD--LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~-~-~~~~~~i~~~~~--~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||+|| ++||.+. . ......+..... .++...++++++||.+||++||++|
T Consensus 217 vilyelltg-~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 274 (290)
T 3fpq_A 217 MCMLEMATS-EYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 274 (290)
T ss_dssp HHHHHHHHS-SCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHHHHC-CCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHC
Confidence 999999999 6788543 2 233344444332 3456678999999999999999998
No 11
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-46 Score=404.00 Aligned_cols=236 Identities=22% Similarity=0.307 Sum_probs=182.9
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
.+.+.+.+.||+|+||+||+|... ..||||+++.... +.+.+|+ .+++.++|||||+++|+|.+ +.++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~-~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEV-AVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHH-HHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 345678899999999999999754 3699999864321 2334454 48899999999999999865 5689999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+++|+|.++|+.. ...+++.++++|+.|||+||+|||+++
T Consensus 111 E----------y~~gGsL~~~l~~~----------------------------~~~l~~~~~~~i~~qia~gL~yLH~~~ 152 (307)
T 3omv_A 111 Q----------WCEGSSLYKHLHVQ----------------------------ETKFQMFQLIDIARQTAQGMDYLHAKN 152 (307)
T ss_dssp E----------CCSSCBHHHHHHTS----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred E----------cCCCCCHHHHHhhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9 77889999988643 245889999999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC---CCCCchhhHHHHHHHHHH
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ---GRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~t~ksDIwSfGvvL~E 703 (753)
||||||||+||||+.+ ..+||+|||+|+...... ........+||+.|||||++.+ ..|+.++|||||||+|||
T Consensus 153 IiHRDlKp~NILl~~~--~~~Ki~DFGla~~~~~~~-~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~E 229 (307)
T 3omv_A 153 IIHRDMKSNNIFLHEG--LTVKIGDFGLATVKSRWS-GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE 229 (307)
T ss_dssp CBCSCCCSSSEEEETT--EEEEECCCSSCBC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHH
T ss_pred ccCCccCHHHEEECCC--CcEEEeeccCceecccCC-cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHH
Confidence 9999999999999766 459999999998765322 1223345679999999999964 458999999999999999
Q ss_pred HHhCCCCCCCCCh-H-HHHHHHHccC-c----ccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGESF-E-RDANIVKDRK-D----LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~~-~-~~~~~i~~~~-~----~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+|| ++||.+.. . .....+.... . ..+..+++++.+||.+||++||++|
T Consensus 230 lltg-~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~R 285 (307)
T 3omv_A 230 LMTG-ELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEER 285 (307)
T ss_dssp HHHS-SCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTS
T ss_pred HHHC-CCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHC
Confidence 9998 67886543 2 2233333322 1 2345678999999999999999998
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.7e-46 Score=416.89 Aligned_cols=235 Identities=25% Similarity=0.419 Sum_probs=196.8
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC---chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
.+.|++.+.||+|+||+||+|... +|+.||||++.... .+...+|+. +++.++|||||++++++.+++.+|||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~-il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-IMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHH-HHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 456999999999999999999764 59999999996432 344566776 7899999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+++|+|.+++.. ..+++.++..|+.||+.||+|||+++|
T Consensus 229 ----------y~~gG~L~~~i~~------------------------------~~l~e~~~~~~~~qil~aL~ylH~~~I 268 (423)
T 4fie_A 229 ----------FLEGGALTDIVTH------------------------------TRMNEEQIAAVCLAVLQALSVLHAQGV 268 (423)
T ss_dssp ----------CCTTEEHHHHHHH------------------------------SCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------CCCCCcHHHHHhc------------------------------cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6677888877632 357888999999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG 707 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG 707 (753)
|||||||+||||+.++. +||+|||+|+.+.... ....+.+||+.|||||++.+..|+.++|||||||++|||++|
T Consensus 269 iHRDiKp~NILl~~~g~--vKl~DFGla~~~~~~~---~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G 343 (423)
T 4fie_A 269 IHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEV---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343 (423)
T ss_dssp ECCCCSTTTEEECTTCC--EEECCCTTCEECCSSC---CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred ecccCCHHHEEEcCCCC--EEEecCccceECCCCC---ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHC
Confidence 99999999999988765 9999999999875432 233466899999999999999999999999999999999999
Q ss_pred CCCCCCCC-hHHHHHHHHccCc---ccccCCCHHHHHHHHHccccCcCCC
Q 004442 708 GKHPYGES-FERDANIVKDRKD---LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 708 ~~~Pf~~~-~~~~~~~i~~~~~---~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.+||.+. .......+..... ..+..+++++++||.+||.+||++|
T Consensus 344 -~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R 392 (423)
T 4fie_A 344 -EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 392 (423)
T ss_dssp -SCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTS
T ss_pred -CCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHC
Confidence 6677554 3444444444332 2345689999999999999999998
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.3e-45 Score=402.08 Aligned_cols=256 Identities=21% Similarity=0.295 Sum_probs=198.9
Q ss_pred ecceEEEeEEecccCceEEEEEEeeC------CcEEEEEEeecCCc----hHHHHHHHHHHHhCC-CCceeeecccccCC
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNYE------GRSVAVKRLVKTHH----DVALKEIQNLIASDQ-HPNIVRWYGVESDQ 539 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~~------g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~-HpNIV~L~g~~~~~ 539 (753)
..++|++.+.||+|+||+||+|.... ++.||||++..... +.+.+|+. +++.++ |||||+++|+|.+.
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~-il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK-ILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEEECCT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHH-HHHHcCCCCcEEEEEEEEEec
Confidence 34679999999999999999997543 46899999976542 23455665 556665 59999999999764
Q ss_pred -ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 540 -DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 540 -~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
+.++|||| |+++|+|.++|+.......... ..........+++.+++.|+.|||+|
T Consensus 141 ~~~~~iV~E----------y~~~G~L~~~L~~~~~~~~~~~-------------~~~~~~~~~~l~~~~~~~~~~qia~g 197 (353)
T 4ase_A 141 GGPLMVIVE----------FCKFGNLSTYLRSKRNEFVPYK-------------VAPEDLYKDFLTLEHLICYSFQVAKG 197 (353)
T ss_dssp TSCCEEEEE----------CCTTEEHHHHHHHTGGGBCCC--------------------CTTCBCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEE----------cCCCCCHHHHHHhccccccccc-------------ccchhhccccCCHHHHHHHHHHHHHH
Confidence 57899999 7889999999986543211100 00011223568999999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
|+|||+++||||||||+|||++.++ .+||+|||+|+.+..+... ......+||+.|||||++.+..|+.++||||||
T Consensus 198 l~yLH~~~iiHRDLK~~NILl~~~~--~vKi~DFGlar~~~~~~~~-~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~G 274 (353)
T 4ase_A 198 MEFLASRKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 274 (353)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTTTCTTS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred HHhHhhCCeecCccCccceeeCCCC--CEEECcchhhhhcccCCCc-eeeccccccccccCHHHHhcCCCCCcccEeehH
Confidence 9999999999999999999997765 5999999999977544322 223445689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCh--HHHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGESF--ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~--~~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+||||+|.+.+||.+.. +.....+..+ ....+..+++++.++|.+||+.||++|
T Consensus 275 v~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~R 332 (353)
T 4ase_A 275 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 332 (353)
T ss_dssp HHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHC
Confidence 999999994477887642 3334444443 455677889999999999999999998
No 14
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.3e-45 Score=394.15 Aligned_cols=238 Identities=21% Similarity=0.325 Sum_probs=180.7
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHH-HHHHhCCCCceeeecccccCCc----eEEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ-NLIASDQHPNIVRWYGVESDQD----FVYLSL 546 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~-~ll~~l~HpNIV~L~g~~~~~~----~~~LV~ 546 (753)
.++|.+.+.||+|+||+||+|.. +|+.||||++.........+|.+ ..+..++|||||+++|+|.+++ .+||||
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 46788999999999999999975 78999999998766555555543 2345789999999999998653 689999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC-
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI- 625 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~- 625 (753)
| |+++|+|.++|+. .+++|..+++|+.|+|+||+|||++
T Consensus 81 E----------y~~~gsL~~~l~~------------------------------~~l~~~~~~~i~~~ia~gl~ylH~~~ 120 (303)
T 3hmm_A 81 D----------YHEHGSLFDYLNR------------------------------YTVTVEGMIKLALSTASGLAHLHMEI 120 (303)
T ss_dssp E----------CCTTCBHHHHHHH------------------------------CCBCHHHHHHHHHHHHHHHHHHHCCB
T ss_pred c----------CCCCCcHHHHHHh------------------------------CCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9 8889999998853 3477888999999999999999987
Q ss_pred -------CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc-ccCccCCCCccccccccccCC------CCCch
Q 004442 626 -------GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL-TQNATGYGSSGWQAPEQLLQG------RQTRA 691 (753)
Q Consensus 626 -------~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~------~~t~k 691 (753)
+|+||||||+||||+.++ .+||+|||+|+......... ......+||+.|||||++.+. .++.+
T Consensus 121 ~~~~~~~~IiHRDlKp~NILl~~~~--~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k 198 (303)
T 3hmm_A 121 VGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 198 (303)
T ss_dssp CSTTCBCCEECSCCCGGGEEECTTS--CEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHH
T ss_pred hhccCCCCEeeccCCcccEEECCCC--CEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChh
Confidence 899999999999997665 59999999999876543222 223345799999999999765 36789
Q ss_pred hhHHHHHHHHHHHHhCCCCCCC----------CC------hHHHHHHHHcc-C-cccccC-----CCHHHHHHHHHcccc
Q 004442 692 IDLFSLGCILFFCITGGKHPYG----------ES------FERDANIVKDR-K-DLFLVE-----HIPEAVDLFTRLLDP 748 (753)
Q Consensus 692 sDIwSfGvvL~EllTG~~~Pf~----------~~------~~~~~~~i~~~-~-~~~~~~-----~s~el~dLI~~cL~~ 748 (753)
+|||||||+||||+||+ +|++ +. .+.....+... . +..+.. .++++.+||.+||+.
T Consensus 199 ~DVwS~Gvvl~El~tg~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~ 277 (303)
T 3hmm_A 199 ADIYAMGLVFWEIARRC-SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA 277 (303)
T ss_dssp HHHHHHHHHHHHHHHTB-CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCS
T ss_pred HhhhhHHHHHHHHHHCC-CCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHccc
Confidence 99999999999999984 3432 11 11222222221 1 122222 224688999999999
Q ss_pred CcCCC
Q 004442 749 NPDLR 753 (753)
Q Consensus 749 DP~~R 753 (753)
||++|
T Consensus 278 dP~~R 282 (303)
T 3hmm_A 278 NGAAR 282 (303)
T ss_dssp SGGGS
T ss_pred CHhHC
Confidence 99998
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.2e-44 Score=387.80 Aligned_cols=238 Identities=23% Similarity=0.430 Sum_probs=176.2
Q ss_pred ceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCc-------
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD------- 540 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~------- 540 (753)
.+|++.+.||+|+||+||+|.. .+|+.||||+++.... +...+|+. +++.++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~-il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK-ALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHH-HHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEEecCccccccc
Confidence 3588999999999999999975 4699999999975442 23455655 789999999999999986543
Q ss_pred -----eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHH
Q 004442 541 -----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (753)
Q Consensus 541 -----~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qI 615 (753)
.+||||| |+.+|+|.+++..... ....++..++.|+.||
T Consensus 84 ~~~~~~l~ivmE----------~~~gg~L~~~l~~~~~--------------------------~~~~~~~~~~~i~~qi 127 (299)
T 4g31_A 84 SSPKVYLYIQMQ----------LCRKENLKDWMNGRCT--------------------------IEERERSVCLHIFLQI 127 (299)
T ss_dssp ---CEEEEEEEE----------CCCSCCHHHHHHTCCS--------------------------GGGSCHHHHHHHHHHH
T ss_pred cCCCcEEEEEEe----------cCCCCcHHHHHHhcCC--------------------------CChhHHHHHHHHHHHH
Confidence 4799999 6678888888864321 1123456678999999
Q ss_pred HHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc---------ccCccCCCCccccccccccCC
Q 004442 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL---------TQNATGYGSSGWQAPEQLLQG 686 (753)
Q Consensus 616 a~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~---------~~~~~~~GT~~Y~APE~l~~~ 686 (753)
+.||+|||+++|+||||||+||||+.++. +||+|||+|+.+....... ......+||+.|||||++.+.
T Consensus 128 ~~al~ylH~~~IiHRDlKp~NILl~~~~~--vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~ 205 (299)
T 4g31_A 128 AEAVEFLHSKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN 205 (299)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCCCCC--------------------------CCCTTSCHHHHTTC
T ss_pred HHHHHHHHHCcCccccCcHHHeEECCCCc--EEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCC
Confidence 99999999999999999999999987765 9999999999875432211 122345799999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 687 RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 687 ~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~~~--~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.|+.++|||||||++|||++ ||....+... ..+... .++.+...++++.+||++||++||++|
T Consensus 206 ~y~~~~DiwSlGvilyell~----Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~R 271 (299)
T 4g31_A 206 SYSHKVDIFSLGLILFELLY----PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMER 271 (299)
T ss_dssp CCCTHHHHHHHHHHHHHHHS----CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCHHHHHHHHHHHHHHcc----CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHC
Confidence 99999999999999999996 6655433322 222222 223334557788999999999999998
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-43 Score=392.59 Aligned_cols=239 Identities=22% Similarity=0.345 Sum_probs=185.7
Q ss_pred ecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeeccccc------C
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVES------D 538 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~------~ 538 (753)
++++|++.+.||+|+||+||+|.. .+|+.||||++++... +...+|+. +++.++|||||++++++. +
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~~ 130 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK-ILKHFKHDNIIAIKDILRPTVPYGE 130 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHH-HHHHCCCTTBCCEEEECCCSSCTTT
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHH-HHHhcCCCCcceEeeeeeccccccc
Confidence 457899999999999999999976 4699999999965431 23456766 789999999999999865 3
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+.+|||||||++ +|.+++. +...+++.++..++.||+.|
T Consensus 131 ~~~~~ivmE~~~g-----------~L~~~i~-----------------------------~~~~l~~~~~~~~~~qil~a 170 (398)
T 4b99_A 131 FKSVYVVLDLMES-----------DLHQIIH-----------------------------SSQPLTLEHVRYFLYQLLRG 170 (398)
T ss_dssp CCCEEEEEECCSE-----------EHHHHHT-----------------------------SSSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCC-----------CHHHHHH-----------------------------hcCCCCHHHHHHHHHHHHHH
Confidence 4679999996554 4444442 23568899999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCC-cccccCccCCCCccccccccccCCC-CCchhhHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDM-SCLTQNATGYGSSGWQAPEQLLQGR-QTRAIDLFS 696 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~-~~~~~~~~~~GT~~Y~APE~l~~~~-~t~ksDIwS 696 (753)
|+|||+++||||||||+|||++.++. +||+|||+|+.+.... .......+.+||+.|||||++.+.. ++.++||||
T Consensus 171 l~ylH~~~iiHRDlKP~NIl~~~~~~--~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWS 248 (398)
T 4b99_A 171 LKYMHSAQVIHRDLKPSNLLVNENCE--LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 248 (398)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTTCC--EEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHH
T ss_pred HHHHHHCcCcCCCcCccccccCCCCC--EEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheeh
Confidence 99999999999999999999977765 9999999998764322 1223345678999999999988765 699999999
Q ss_pred HHHHHHHHHhCCCCCCCCCh-HHHHHHHHccCc-------------------------------ccccCCCHHHHHHHHH
Q 004442 697 LGCILFFCITGGKHPYGESF-ERDANIVKDRKD-------------------------------LFLVEHIPEAVDLFTR 744 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~-~~~~~~i~~~~~-------------------------------~~~~~~s~el~dLI~~ 744 (753)
+||++|||++| ++||.+.. ......+..... ......++++.+||++
T Consensus 249 lG~il~ell~G-~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~ 327 (398)
T 4b99_A 249 VGCIFGEMLAR-RQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGR 327 (398)
T ss_dssp HHHHHHHHHHT-SCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred hHHHHHHHHHC-CCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHH
Confidence 99999999999 66776543 333333221100 0123468899999999
Q ss_pred ccccCcCCC
Q 004442 745 LLDPNPDLR 753 (753)
Q Consensus 745 cL~~DP~~R 753 (753)
||.+||++|
T Consensus 328 mL~~dP~~R 336 (398)
T 4b99_A 328 MLRFEPSAR 336 (398)
T ss_dssp HSCSSTTTS
T ss_pred HCcCChhHC
Confidence 999999998
No 17
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7.7e-43 Score=406.44 Aligned_cols=235 Identities=24% Similarity=0.356 Sum_probs=196.5
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC-----CchHH-HHH--HHHHHHhCCCCceeeecccccCCceE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT-----HHDVA-LKE--IQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~-----~~~~~-~~E--i~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
-++|.+.+.||+|+||+||+|... +|+.||||++.+. ..... .+| +..+++.++|||||++++++.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999765 5999999999643 22222 222 22355678999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
||||| |+++|+|.++|.. ...+++..+..++.||+.||+||
T Consensus 268 ylVmE----------y~~GGdL~~~l~~-----------------------------~~~l~E~~a~~y~~qIl~aL~yL 308 (689)
T 3v5w_A 268 SFILD----------LMNGGDLHYHLSQ-----------------------------HGVFSEADMRFYAAEIILGLEHM 308 (689)
T ss_dssp EEEEC----------CCCSCBHHHHHHH-----------------------------HCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------cCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 7788999988853 24688899999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCIL 701 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIwSfGvvL 701 (753)
|++|||||||||+||||+.++. +||+|||+|+.+... ...+.+||+.|||||++.. ..|+.++|||||||+|
T Consensus 309 H~~gIiHRDLKPeNILld~~G~--vKL~DFGlA~~~~~~-----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvil 381 (689)
T 3v5w_A 309 HNRFVVYRDLKPANILLDEHGH--VRISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381 (689)
T ss_dssp HTTTEECCCCSGGGEEECTTSC--EEECCCTTCEECSSC-----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHH
T ss_pred HHCCccccCCchHHeEEeCCCC--EEecccceeeecCCC-----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence 9999999999999999988775 999999999987543 2346789999999999975 5799999999999999
Q ss_pred HHHHhCCCCCCCCCh----HHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGESF----ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~----~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++| .+||.+.. ......+......++..+++++++||.+||.+||++|
T Consensus 382 YEmLtG-~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~R 436 (689)
T 3v5w_A 382 FKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436 (689)
T ss_dssp HHHHHS-SCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGC
T ss_pred HHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHC
Confidence 999999 67885432 2334455566677888999999999999999999998
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.8e-42 Score=380.62 Aligned_cols=202 Identities=25% Similarity=0.379 Sum_probs=161.5
Q ss_pred eecceEEEeEEecccCceEEEEEEee----CCcEEEEEEeecCCc-hHHHHHHHHHHHhC-CCCceeeecccccCCceEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH-DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~----~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~ 543 (753)
.+.+.|++.+.||+|+||+||+|... .++.||||++.+... ....+|+. ++..+ +|||||++++++.+++.+|
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~-~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQ-CLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHH-HHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHH-HHHHhcCCCCCceEEEEEEECCEEE
Confidence 45677999999999999999999653 478999999976544 34566776 44554 7999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
|||| |+++|+|.++++ .+++.++..++.||+.||+|||
T Consensus 97 lvmE----------~~~g~~L~~~~~--------------------------------~l~~~~~~~~~~qll~al~ylH 134 (361)
T 4f9c_A 97 IAMP----------YLEHESFLDILN--------------------------------SLSFQEVREYMLNLFKALKRIH 134 (361)
T ss_dssp EEEE----------CCCCCCHHHHHT--------------------------------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------CCCcccHHHHHc--------------------------------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 666777777652 3677888999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcc-------------------------cccCccCCCCcccc
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC-------------------------LTQNATGYGSSGWQ 678 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~-------------------------~~~~~~~~GT~~Y~ 678 (753)
++||+||||||+|||++.+. ..+||+|||+|+........ .....+.+||+.||
T Consensus 135 ~~gIiHRDiKPeNiLl~~~~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 213 (361)
T 4f9c_A 135 QFGIVHRDVKPSNFLYNRRL-KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFR 213 (361)
T ss_dssp HTTEECSCCSGGGEEEETTT-TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGC
T ss_pred HCCeEeCcCCHHHeEEeCCC-CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCcccc
Confidence 99999999999999997663 25999999999876532211 11223457999999
Q ss_pred ccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 004442 679 APEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGES 715 (753)
Q Consensus 679 APE~l~~~~-~t~ksDIwSfGvvL~EllTG~~~Pf~~~ 715 (753)
|||++.+.. |+.++||||+||++|||+||+.|+|.+.
T Consensus 214 APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 214 APEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp CHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred CHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 999998764 8999999999999999999954444443
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1e-41 Score=396.03 Aligned_cols=239 Identities=23% Similarity=0.368 Sum_probs=198.6
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc---hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
+.++|.+.+.||+|+||+||++... +|+.||||++..... +...+|+. +++.++|||||++++++.+++.+||||
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQ-TMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHH-HHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHH-HHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 3467999999999999999999764 699999999976542 23455655 789999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+.+|+|.++|... ...+++.++..++.||+.||+|||+++
T Consensus 234 E----------~~~gg~L~~~i~~~----------------------------~~~l~e~~~~~~~~qi~~al~ylH~~~ 275 (573)
T 3uto_A 234 E----------FMSGGELFEKVADE----------------------------HNKMSEDEAVEYMRQVCKGLCHMHENN 275 (573)
T ss_dssp E----------CCCCCBHHHHHTCT----------------------------TSCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred e----------ecCCCcHHHHHHHh----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9 77788888877432 235778899999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
|+||||||+|||++.+....+||+|||+|+.+.... .....+||+.|||||++.+..|+.++|||||||++|||++
T Consensus 276 iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~ 351 (573)
T 3uto_A 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 351 (573)
T ss_dssp EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS----EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred eeeccCChhhccccCCCCCCEEEeeccceeEccCCC----ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999987654569999999999876432 2244579999999999999999999999999999999999
Q ss_pred CCCCCCCCCh-HHHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESF-ERDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~-~~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| .+||.+.. ......+...... .+..+++++++||++||.+||++|
T Consensus 352 G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R 402 (573)
T 3uto_A 352 G-LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTR 402 (573)
T ss_dssp S-CCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred C-CCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHC
Confidence 9 66776554 4444555544332 335689999999999999999998
No 20
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.6e-39 Score=353.76 Aligned_cols=235 Identities=26% Similarity=0.355 Sum_probs=197.4
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC------CchHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~------~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
++|.+.+.||+|+||+||++... +|+.||||++++. ......+|. .+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES-RVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHH-HHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHH-HHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 57889999999999999999765 5999999999643 122344454 477899999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.+++.. ...+++..+..++.||+.||+|||++
T Consensus 84 ~E----------~~~gg~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~ 124 (337)
T 1o6l_A 84 ME----------YANGGELFFHLSR-----------------------------ERVFTEERARFYGAEIVSALEYLHSR 124 (337)
T ss_dssp EE----------CCTTCBHHHHHHH-----------------------------HSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred Ee----------CCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 7778888887743 24578889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
+|+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 125 ~ivHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 199 (337)
T 1o6l_A 125 DVVYRDIKLENLMLDKDGH--IKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199 (337)
T ss_dssp TCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCCTT---CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHH
T ss_pred CeecCcCCHHHEEECCCCC--EEEeeccchhhcccCC---CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHh
Confidence 9999999999999977765 9999999998643321 2234567999999999999999999999999999999999
Q ss_pred hCCCCCCCC-ChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~-~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+| .+||.. ........+......++..+++++.+||++||++||++|
T Consensus 200 ~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R 247 (337)
T 1o6l_A 200 CG-RLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR 247 (337)
T ss_dssp HS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred cC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHh
Confidence 99 556654 445555666667777888899999999999999999998
No 21
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.4e-39 Score=350.78 Aligned_cols=237 Identities=27% Similarity=0.380 Sum_probs=199.3
Q ss_pred eecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
...++|.+.+.||+|+||.||+|.. .+|+.||||++..... +...+|+. +++.++||||+++++++.+.+..|
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVR-IMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEECCEEE
Confidence 3446799999999999999999976 5799999999965421 23445555 789999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+++|+|.+++... ..+++..+..++.|++.||+|||
T Consensus 91 lv~e----------~~~~~~L~~~l~~~-----------------------------~~l~~~~~~~~~~qi~~al~~lH 131 (328)
T 3fe3_A 91 LIME----------YASGGEVFDYLVAH-----------------------------GRMKEKEARSKFRQIVSAVQYCH 131 (328)
T ss_dssp EEEC----------CCTTCBHHHHHHHH-----------------------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------CCCCCcHHHHHHHc-----------------------------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 77788888877432 45788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCC-chhhHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQT-RAIDLFSLGCILF 702 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t-~ksDIwSfGvvL~ 702 (753)
+.+|+||||||+|||++.++. +||+|||+++...... .....+||+.|+|||++.+..+. .++|||||||++|
T Consensus 132 ~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 205 (328)
T 3fe3_A 132 QKRIVHRDLKAENLLLDADMN--IKIADFGFSNEFTVGG----KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILY 205 (328)
T ss_dssp HTTCCCSCCCGGGEEECTTSC--EEECSTTCCGGGSSSC----GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHH
T ss_pred HCCEeccCCCHHHEEEcCCCC--EEEeeccCceecCCCC----ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHH
Confidence 999999999999999977654 9999999998765331 23456799999999999988874 8999999999999
Q ss_pred HHHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+|| .+||.+. .......+.......+...++++.+||++||+.||++|
T Consensus 206 ell~g-~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R 256 (328)
T 3fe3_A 206 TLVSG-SLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKR 256 (328)
T ss_dssp HHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTS
T ss_pred HHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHC
Confidence 99998 6677655 44555666677777788899999999999999999998
No 22
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=357.43 Aligned_cols=236 Identities=24% Similarity=0.371 Sum_probs=193.3
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC------CchHHHHHHHHHHHhC-CCCceeeecccccCCceEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT------HHDVALKEIQNLIASD-QHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~------~~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~ 543 (753)
.++|.+.+.||+|+||+||++... +|+.||||++++. ......+|.. ++..+ +||||+++++++.+.+..|
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~-il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR-ILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHH-HHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHH-HHHhccCCCceeeEEEEEEeCCEEE
Confidence 357899999999999999999765 5899999999753 1223445554 55555 7999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++.. ...+++..+..++.||+.||+|||
T Consensus 101 lv~E----------~~~gg~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH 141 (353)
T 3txo_A 101 FVME----------FVNGGDLMFHIQK-----------------------------SRRFDEARARFYAAEIISALMFLH 141 (353)
T ss_dssp EEEE----------CCCSCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------CCCCCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 7777888887753 245788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+|+||||||+|||++.++. +||+|||+++..... .......+||+.|+|||++.+..++.++|||||||++||
T Consensus 142 ~~givHrDlkp~NILl~~~g~--ikL~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 216 (353)
T 3txo_A 142 DKGIIYRDLKLDNVLLDHEGH--CKLADFGMCKEGICN---GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216 (353)
T ss_dssp HTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCC------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred HCCCcccCCCHHHEEECCCCC--EEEccccceeecccC---CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHH
Confidence 999999999999999977765 999999999864322 123345679999999999999999999999999999999
Q ss_pred HHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++| .+||... .......+......++..+++++.+||++||.+||++|
T Consensus 217 ll~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R 266 (353)
T 3txo_A 217 MLCG-HAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMR 266 (353)
T ss_dssp HHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHHc
Confidence 9998 5666554 45556667777778888899999999999999999998
No 23
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.8e-39 Score=351.90 Aligned_cols=237 Identities=24% Similarity=0.368 Sum_probs=197.4
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC------CchHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~------~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
.++|.+.+.||+|+||+||++... +|+.||||++++. .......|...+....+||||+++++++.+.+..|+
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 467889999999999999999765 5899999999753 223345565544444599999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+++|+|.+++... ..+++.++..++.||+.||+|||+
T Consensus 96 v~E----------~~~gg~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~aL~~LH~ 136 (345)
T 1xjd_A 96 VME----------YLNGGDLMYHIQSC-----------------------------HKFDLSRATFYAAEIILGLQFLHS 136 (345)
T ss_dssp EEE----------CCTTCBHHHHHHHH-----------------------------SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe----------CCCCCcHHHHHHHc-----------------------------CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 77788888887532 357888999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~El 704 (753)
.+|+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 137 ~~ivHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 211 (345)
T 1xjd_A 137 KGIVYRDLKLDNILLDKDGH--IKIADFGMCKENMLGD---AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 211 (345)
T ss_dssp TTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred CCeEeCCCChhhEEECCCCC--EEEeEChhhhhcccCC---CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHH
Confidence 99999999999999977765 9999999998643221 223456799999999999999999999999999999999
Q ss_pred HhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 ITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++| .+||... .......+......++..+++++.+||++||..||++|
T Consensus 212 l~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R 260 (345)
T 1xjd_A 212 LIG-QSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 260 (345)
T ss_dssp HHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred hcC-CCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHHHHHHhcCCHhHc
Confidence 999 5666554 44555666667777788899999999999999999998
No 24
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=353.17 Aligned_cols=240 Identities=24% Similarity=0.357 Sum_probs=193.8
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
..+.++|.+.+.||+|+||+||+|.. .+|+.||||++.... .....+|+. +++.++||||+++++++.+.+..+
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~-~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE-ALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHH-HHHhCCCCCEeeEEEEEEeCCEEE
Confidence 45667899999999999999999975 569999999996543 234455655 789999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+++|+|.+++.. ...+++.++..++.||+.||+|||
T Consensus 85 lv~E----------~~~gg~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi~~aL~~LH 125 (347)
T 3zgw_A 85 MVLE----------YCPGGELFDYIIS-----------------------------QDRLSEEETRVVFRQIVSAVAYVH 125 (347)
T ss_dssp EEEE----------CCTTCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------CCCCCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 6677888887743 245788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-CchhhHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILF 702 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDIwSfGvvL~ 702 (753)
+.+|+||||||+|||++.++. +||+|||++........ ......+||+.|+|||++.+..+ +.++|||||||++|
T Consensus 126 ~~givHrDlkp~NIll~~~~~--~kL~DFG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ 201 (347)
T 3zgw_A 126 SQGYAHRDLKPENLLFDEYHK--LKLIDFGLCAKPKGNKD--YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLY 201 (347)
T ss_dssp HTTCBCCCCCGGGEEECTTSC--EEECCCTTCBC----------------CGGGCCHHHHTTC---CCHHHHHHHHHHHH
T ss_pred HCCeEeCCccHHHEEEcCCCC--EEEEeccCcccccCCCC--ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHH
Confidence 999999999999999977654 99999999986543321 22345579999999999988886 99999999999999
Q ss_pred HHHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++| .+||.+. .......+.......+..+++++.+||++||+.||++|
T Consensus 202 ell~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R 252 (347)
T 3zgw_A 202 VLMCG-FLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKR 252 (347)
T ss_dssp HHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHC
Confidence 99999 6677655 44555666677777888899999999999999999998
No 25
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-39 Score=347.25 Aligned_cols=233 Identities=23% Similarity=0.370 Sum_probs=196.7
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC-----CchHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~-----~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
++|.+.+.||+|+||+||++... +|+.||||++.+. .....+.++..+++.++||||+++++++.+.+..|+||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56889999999999999998765 6999999999653 12233344445789999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+.+|+|.+++.. ...+++..+..++.||+.||+|||+.+
T Consensus 86 e----------~~~gg~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ 126 (318)
T 1fot_A 86 D----------YIEGGELFSLLRK-----------------------------SQRFPNPVAKFYAAEVCLALEYLHSKD 126 (318)
T ss_dssp C----------CCCSCBHHHHHHH-----------------------------TSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred e----------CCCCCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9 7777888887753 235778889999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
|+||||||+|||++.++. +||+|||+++..... ....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 127 ivHrDlkp~NIll~~~g~--~kL~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 198 (318)
T 1fot_A 127 IIYRDLKPENILLDKNGH--IKITDFGFAKYVPDV------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198 (318)
T ss_dssp EECCCCCGGGEEECTTSC--EEECCCSSCEECSSC------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH
T ss_pred ccccCCChheEEEcCCCC--EEEeecCcceecCCc------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHh
Confidence 999999999999977765 999999999876432 234579999999999999999999999999999999999
Q ss_pred CCCCCCCC-ChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~-~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| .+||.. ........+......++..+++++.++|++||..||++|
T Consensus 199 g-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R 245 (318)
T 1fot_A 199 G-YTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQR 245 (318)
T ss_dssp S-SCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTC
T ss_pred C-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHc
Confidence 9 556654 444555566666677788899999999999999999998
No 26
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.4e-39 Score=357.87 Aligned_cols=237 Identities=22% Similarity=0.296 Sum_probs=196.9
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
.++|.+.+.||+|+||+||++... +++.||||++++.. .....+|...+....+||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357899999999999999999765 58899999997532 12345566544445699999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++.. ...+++..+..++.||+.||+|||+
T Consensus 131 V~E----------~~~gg~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~ 171 (396)
T 4dc2_A 131 VIE----------YVNGGDLMFHMQR-----------------------------QRKLPEEHARFYSAEISLALNYLHE 171 (396)
T ss_dssp EEE----------CCTTCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE----------cCCCCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 7778888887753 2457889999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~El 704 (753)
.+|+||||||+||||+.++. +||+|||+++..... .......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 172 ~givHrDLKp~NILl~~~g~--ikL~DFGla~~~~~~---~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyel 246 (396)
T 4dc2_A 172 RGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRP---GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246 (396)
T ss_dssp TTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCT---TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred CCEEeccCCHHHEEECCCCC--EEEeecceeeecccC---CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHH
Confidence 99999999999999977765 999999999864322 1233456799999999999999999999999999999999
Q ss_pred HhCCCCCCCCC----------hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 ITGGKHPYGES----------FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lTG~~~Pf~~~----------~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++| .+||... .......+......++..+++++.+||++||++||++|
T Consensus 247 l~G-~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R 304 (396)
T 4dc2_A 247 MAG-RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 304 (396)
T ss_dssp HHS-SCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTS
T ss_pred HhC-CCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHc
Confidence 998 6787421 22344556667777888999999999999999999998
No 27
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-38 Score=348.16 Aligned_cols=235 Identities=23% Similarity=0.319 Sum_probs=193.7
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC--c----hHHHHHHHHHHHhC-CCCceeeecccccCCceEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH--H----DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~--~----~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~L 544 (753)
++|.+.+.||+|+||.||++... +++.||||++.+.. . ....+|.. ++..+ +||||+++++++.+.+..|+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH-VFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHH-HHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHH-HHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 56889999999999999999765 58999999997542 1 12334444 55554 89999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+++|+|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 88 v~e----------~~~gg~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~ 128 (345)
T 3a8x_A 88 VIE----------YVNGGDLMFHMQR-----------------------------QRKLPEEHARFYSAEISLALNYLHE 128 (345)
T ss_dssp EEC----------CCCSCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe----------CCCCCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 7777888887743 2357888999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~El 704 (753)
.+|+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 129 ~~ivHrDlkp~NIll~~~g~--~kL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 203 (345)
T 3a8x_A 129 RGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203 (345)
T ss_dssp TTCBCCCCCGGGEEECTTSC--EEECCGGGCBCSCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred CCceecCCCHHHEEECCCCC--EEEEeccccccccCCC---CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHH
Confidence 99999999999999977765 9999999998643221 223456799999999999999999999999999999999
Q ss_pred HhCCCCCCCC----------ChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 ITGGKHPYGE----------SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lTG~~~Pf~~----------~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++| .+||.. ........+......++..+++++.+||++||++||++|
T Consensus 204 l~g-~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R 261 (345)
T 3a8x_A 204 MAG-RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 261 (345)
T ss_dssp HHS-SCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred HhC-CCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHC
Confidence 998 668753 222334455566667788899999999999999999998
No 28
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.1e-39 Score=350.89 Aligned_cols=236 Identities=23% Similarity=0.324 Sum_probs=196.7
Q ss_pred cceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecC------CchHHHHHHHHHHHhC-CCCceeeecccccCCceEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKT------HHDVALKEIQNLIASD-QHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~------~~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~ 543 (753)
.++|.+.+.||+|+||+||++.... |+.||||++.+. ..+....|.. ++..+ +||||+++++++.+.+..|
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~-~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR-VLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHH-HHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHH-HHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999997764 889999999753 1223444544 55555 8999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+++|+|.+++... ..+++..++.++.||+.||+|||
T Consensus 98 lv~E----------~~~gg~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~aL~~LH 138 (353)
T 2i0e_A 98 FVME----------YVNGGDLMYHIQQV-----------------------------GRFKEPHAVFYAAEIAIGLFFLQ 138 (353)
T ss_dssp EEEE----------CCCSCBHHHHHHHH-----------------------------SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------CCCCCcHHHHHHhc-----------------------------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 77778888877532 35788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+|+||||||+|||++.++. +||+|||+++..... .......+||+.|+|||++.+..++.++|||||||++||
T Consensus 139 ~~givHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 213 (353)
T 2i0e_A 139 SKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWD---GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 213 (353)
T ss_dssp HTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCT---TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHH
T ss_pred HCCEEeccCCHHHEEEcCCCc--EEEEeCCcccccccC---CcccccccCCccccChhhhcCCCcCCcccccchHHHHHH
Confidence 999999999999999977765 999999999864322 122345679999999999999999999999999999999
Q ss_pred HHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++| .+||... .......+......++..+++++.+||++||.+||++|
T Consensus 214 ll~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R 263 (353)
T 2i0e_A 214 MLAG-QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 263 (353)
T ss_dssp HHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSC
T ss_pred HHcC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHc
Confidence 9999 5676554 44555666677777888999999999999999999998
No 29
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.3e-39 Score=356.13 Aligned_cols=237 Identities=25% Similarity=0.324 Sum_probs=193.6
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
.++|.+.+.||+|+||.||++... +++.||||++.+.. .....+|...+++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467899999999999999999765 48899999997543 12334444434577899999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++... ..+++..+..++.||+.||+|||+
T Consensus 117 v~E----------~~~gg~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~aL~~LH~ 157 (373)
T 2r5t_A 117 VLD----------YINGGELFYHLQRE-----------------------------RCFLEPRARFYAAEIASALGYLHS 157 (373)
T ss_dssp EEE----------CCCSCBHHHHHHHH-----------------------------SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe----------CCCCCcHHHHHHhc-----------------------------CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 77788888877532 356778889999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~El 704 (753)
++|+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 158 ~givHrDlkp~NIll~~~g~--ikL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 232 (373)
T 2r5t_A 158 LNIVYRDLKPENILLDSQGH--IVLTDFGLCKENIEHN---STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM 232 (373)
T ss_dssp TTCCCCCCCGGGEEECTTSC--EEECCCCBCGGGBCCC---CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred CCceecCCCHHHEEECCCCC--EEEeeCccccccccCC---CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHH
Confidence 99999999999999977765 9999999998643321 233456799999999999999999999999999999999
Q ss_pred HhCCCCCCCC-ChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 ITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lTG~~~Pf~~-~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++| .+||.. ........+......++..+++++++||++||++||++|
T Consensus 233 l~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R 281 (373)
T 2r5t_A 233 LYG-LPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKR 281 (373)
T ss_dssp HHS-SCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGS
T ss_pred HcC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHcccCHHhC
Confidence 999 556654 445555666666667788899999999999999999998
No 30
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.9e-38 Score=348.46 Aligned_cols=240 Identities=21% Similarity=0.318 Sum_probs=196.9
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc---------hHHHHHHHHHHHhCCCCceeeecccccC
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH---------DVALKEIQNLIASDQHPNIVRWYGVESD 538 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~---------~~~~~Ei~~ll~~l~HpNIV~L~g~~~~ 538 (753)
..+.+.|.+.+.||+|+||.||++... +|+.||||.+.+... +...+|+. ++..++||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~ 86 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS-ILRQVLHPNIITLHDVYEN 86 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHH-HHTTCCCTTBCCEEEEEEC
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHH-HHHhCCCcCCCcEEEEEEe
Confidence 456678999999999999999999765 599999999975431 23445554 7899999999999999999
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++||| |+.+|+|.+++.. ...+++..+..++.||+.|
T Consensus 87 ~~~~~lv~e----------~~~gg~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi~~a 127 (361)
T 2yab_A 87 RTDVVLILE----------LVSGGELFDFLAQ-----------------------------KESLSEEEATSFIKQILDG 127 (361)
T ss_dssp SSEEEEEEE----------CCCSCBHHHHHTT-----------------------------CSCCBHHHHHHHHHHHHHH
T ss_pred CCEEEEEEE----------cCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHH
Confidence 999999999 6667888887742 2357888999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCC--CeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKS--FCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFS 696 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~--~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwS 696 (753)
|.|||+.+|+||||||+|||++.++. ..+||+|||+++...... .....+||+.|+|||++.+..++.++||||
T Consensus 128 L~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 203 (361)
T 2yab_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203 (361)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHH
T ss_pred HHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC----ccccCCCCccEECchHHcCCCCCccccHHH
Confidence 99999999999999999999976652 259999999998875432 234457999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCC-hHHHHHHHHccCccc----ccCCCHHHHHHHHHccccCcCCC
Q 004442 697 LGCILFFCITGGKHPYGES-FERDANIVKDRKDLF----LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~-~~~~~~~i~~~~~~~----~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++|+|++| .+||.+. .......+......+ +..+++++.+||.+||.+||++|
T Consensus 204 lGvil~~ll~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 264 (361)
T 2yab_A 204 IGVITYILLSG-ASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKR 264 (361)
T ss_dssp HHHHHHHHHHS-CCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHHHHHHhC-CCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHC
Confidence 99999999999 5666554 444444454444333 35678999999999999999998
No 31
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.3e-38 Score=347.78 Aligned_cols=244 Identities=23% Similarity=0.284 Sum_probs=197.9
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC--------CchHHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~--------~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
.+.+.|++.+.||+|+||+||++... +|+.||||++... ..+...+|+. +++.++||||+++++++.+++
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS-ICHMLKHPHIVELLETYSSDG 99 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHH-HHHHCCCTTBCCEEEEEEETT
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHH-HHHhCCCCCCCcEEEEEEeCC
Confidence 44577999999999999999999664 6899999998532 1233445554 789999999999999999999
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..|+||| |+.+|+|.+++..... ....+++..+..++.||+.||+
T Consensus 100 ~~~lv~e----------~~~g~~L~~~l~~~~~-------------------------~~~~~~~~~~~~i~~qi~~al~ 144 (351)
T 3c0i_A 100 MLYMVFE----------FMDGADLCFEIVKRAD-------------------------AGFVYSEAVASHYMRQILEALR 144 (351)
T ss_dssp EEEEEEE----------CCSSCBHHHHHHHHHH-------------------------TTCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEe----------CCCCCCHHHHHHHhcc-------------------------cCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999 6667788777654321 1235788899999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCC-CeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKS-FCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 699 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~-~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGv 699 (753)
|||+++|+||||||+|||++.++. ..+||+|||+++...... ......+||+.|+|||++.+..++.++|||||||
T Consensus 145 ~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 221 (351)
T 3c0i_A 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGV 221 (351)
T ss_dssp HHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS---CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHH
T ss_pred HHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCC---eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHH
Confidence 999999999999999999976542 459999999998875432 1223457999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCChHHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGESFERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||++| .+||..........+........ ..+++++.+||.+||++||++|
T Consensus 222 il~~ll~g-~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 278 (351)
T 3c0i_A 222 ILFILLSG-CLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAER 278 (351)
T ss_dssp HHHHHHHS-SCSSCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHC-CCCCCCcHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHC
Confidence 99999998 67887776655555544443332 4678999999999999999998
No 32
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.4e-38 Score=343.94 Aligned_cols=236 Identities=28% Similarity=0.379 Sum_probs=190.0
Q ss_pred cceEEEeEEecccCceEEEEEEe----eCCcEEEEEEeecCC------c-hHHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTH------H-DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~----~~g~~VAVK~l~~~~------~-~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
.++|.+.+.||+|+||.||++.. .+|+.||||++++.. . ....+|+ .+++.++||||+++++++.+.+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER-NILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HH-HHHHHCCCTTBCCEEEEEECSS
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHH-HHHHhCCCCCccceeEEEEcCC
Confidence 46799999999999999999876 468999999997542 1 1233444 4789999999999999999999
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..|+||| |+.+|+|.+++... ..+++..+..++.||+.||.
T Consensus 95 ~~~lv~e----------~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~al~ 135 (327)
T 3a62_A 95 KLYLILE----------YLSGGELFMQLERE-----------------------------GIFMEDTACFYLAEISMALG 135 (327)
T ss_dssp CEEEEEE----------CCTTEEHHHHHHHH-----------------------------SSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEe----------CCCCCcHHHHHHhC-----------------------------CCCCHHHHHHHHHHHHHHHH
Confidence 9999999 66677887777432 34677888999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
|||+.+|+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++.+..++.++|||||||+
T Consensus 136 ~lH~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 210 (327)
T 3a62_A 136 HLHQKGIIYRDLKPENIMLNHQGH--VKLTDFGLCKESIHDG---TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGAL 210 (327)
T ss_dssp HHHHTTCCCCCCCTTTEEECTTSC--EEECCCSCC-------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHH
T ss_pred HHHhCCEEcccCCHHHeEECCCCc--EEEEeCCcccccccCC---ccccccCCCcCccCHhhCcCCCCCCcccchhHHHH
Confidence 999999999999999999977765 9999999998653321 22334579999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++| .+||... .......+......++..+++++.+||++||..||++|
T Consensus 211 l~el~~g-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R 263 (327)
T 3a62_A 211 MYDMLTG-APPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASR 263 (327)
T ss_dssp HHHHHHS-SCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGS
T ss_pred HHHHHHC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhc
Confidence 9999998 6677654 44445555666667778899999999999999999998
No 33
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.4e-38 Score=347.88 Aligned_cols=233 Identities=26% Similarity=0.337 Sum_probs=197.8
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
.++|.+.+.||+|+||.||++... +|+.||||++.+.. .+...+|.. +++.++||||+++++++.+.+..|+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-ILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 467999999999999999999765 59999999996432 223444554 7789999999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+++|+|.+++... ..+++..+..++.||+.||+|||+
T Consensus 119 v~e----------~~~gg~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~aL~~LH~ 159 (350)
T 1rdq_E 119 VME----------YVAGGEMFSHLRRI-----------------------------GRFSEPHARFYAAQIVLTFEYLHS 159 (350)
T ss_dssp EEE----------CCTTCBHHHHHHHH-----------------------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEc----------CCCCCcHHHHHHHc-----------------------------CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 77778888877532 357888999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~El 704 (753)
.+|+||||||+|||++.++. +||+|||+++..... ....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 160 ~~ivHrDlkp~NIll~~~g~--~kL~DFg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 231 (350)
T 1rdq_E 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGR------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231 (350)
T ss_dssp TTEECCCCSGGGEEECTTSC--EEECCCTTCEECSSC------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred CCcccccCccceEEECCCCC--EEEcccccceeccCC------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHH
Confidence 99999999999999977765 999999999876432 2345689999999999999999999999999999999
Q ss_pred HhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 ITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++| .+||... .......+......++..+++++.+||++||+.||++|
T Consensus 232 l~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R 280 (350)
T 1rdq_E 232 AAG-YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280 (350)
T ss_dssp HHS-SCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTC
T ss_pred hhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhc
Confidence 999 5566554 44555666667777888999999999999999999998
No 34
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-38 Score=338.92 Aligned_cols=238 Identities=24% Similarity=0.372 Sum_probs=192.9
Q ss_pred eecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
...++|.+.+.||+|+||+||++.. .+|+.||||++.... ....+.++..+++.++||||+++++++.+.+..++||
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 3456788889999999999999975 569999999986432 2333333444789999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+.+|+|.+++.. ..+++.++..++.|++.||+|||+.+
T Consensus 97 e----------~~~~~~L~~~~~~------------------------------~~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (297)
T 3fxz_A 97 E----------YLAGGSLTDVVTE------------------------------TCMDEGQIAAVCRECLQALEFLHSNQ 136 (297)
T ss_dssp E----------CCTTCBHHHHHHH------------------------------SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred E----------CCCCCCHHHHHhh------------------------------cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 6677888887642 24678889999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
|+||||||+|||++.++. +||+|||++........ ......||+.|+|||++.+..++.++|||||||++|||+|
T Consensus 137 i~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 211 (297)
T 3fxz_A 137 VIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211 (297)
T ss_dssp EECCCCSGGGEEECTTCC--EEECCCTTCEECCSTTC---CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHH
T ss_pred ceeCCCCHHHEEECCCCC--EEEeeCCCceecCCccc---ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHh
Confidence 999999999999987765 99999999987754322 2334569999999999999999999999999999999999
Q ss_pred CCCCCCCCChH-HHHHHH-Hcc--CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESFE-RDANIV-KDR--KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~~-~~~~~i-~~~--~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| .+||..... .....+ ... ....+..+++++.+||.+||+.||++|
T Consensus 212 g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 261 (297)
T 3fxz_A 212 G-EPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 261 (297)
T ss_dssp S-SCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred C-CCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHC
Confidence 8 667765533 222222 222 233466789999999999999999998
No 35
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=342.73 Aligned_cols=240 Identities=19% Similarity=0.279 Sum_probs=195.2
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCch--HHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD--VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~--~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
.+.++|.+.+.||+|+||.||++... +++.||+|.+...... ...+|+. +++.++||||+++++++.+.+..++||
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEIS-ILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHH-HHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHH-HHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 35678999999999999999999765 5899999998754422 2344554 789999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+++|+|.+++... ...+++.+++.++.||+.||.|||+.+
T Consensus 81 e----------~~~g~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~al~~lH~~g 122 (321)
T 1tki_A 81 E----------FISGLDIFERINTS----------------------------AFELNEREIVSYVHQVCEALQFLHSHN 122 (321)
T ss_dssp C----------CCCCCBHHHHHTSS----------------------------SCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred E----------eCCCCCHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9 66677888776432 235788899999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
|+||||||+|||++.+++..+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 123 ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~ 198 (321)
T 1tki_A 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS 198 (321)
T ss_dssp EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC----ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999987444569999999998875432 1233458999999999998889999999999999999999
Q ss_pred CCCCCCCCC-hHHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGES-FERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~-~~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
| .+||... .......+......++ ..+++++.+||.+||..||++|
T Consensus 199 g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R 249 (321)
T 1tki_A 199 G-INPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSR 249 (321)
T ss_dssp S-SCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred C-CCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHC
Confidence 9 5677554 4444444444443333 4678999999999999999998
No 36
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4e-38 Score=345.73 Aligned_cols=240 Identities=24% Similarity=0.365 Sum_probs=194.5
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
..+.+.|.+.+.||+|+||.||++... +|+.||||++..... +...+|+. +++.++||||+++++++.+.+..
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~~~~~~~~~~~~ 103 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQEESFH 103 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEEeCCEE
Confidence 345678999999999999999998764 589999999975431 22334544 78999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
|+||| |+.+|+|.+++.. ...+++..+..++.||+.||.||
T Consensus 104 ~lv~e----------~~~gg~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~al~~l 144 (362)
T 2bdw_A 104 YLVFD----------LVTGGELFEDIVA-----------------------------REFYSEADASHCIQQILESIAYC 144 (362)
T ss_dssp EEEEC----------CCCSCBHHHHHTT-----------------------------CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------cCCCCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 6667788777642 23578889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL 701 (753)
|+.+|+||||||+|||++.++ ...+||+|||+++...... .....+||+.|+|||++.+..++.++|||||||++
T Consensus 145 H~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 220 (362)
T 2bdw_A 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220 (362)
T ss_dssp HHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC----SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred HHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc----ccccCCCCccccCHHHHccCCCCchhhHHHHHHHH
Confidence 999999999999999997653 2469999999998765321 22345799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC-ChHHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGE-SFERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~-~~~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++| .+||.+ ........+......++ ..+++++.+||.+||++||++|
T Consensus 221 ~~ll~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 276 (362)
T 2bdw_A 221 YILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR 276 (362)
T ss_dssp HHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHC-CCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhC
Confidence 999999 556654 44444455554443332 4578999999999999999998
No 37
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=341.56 Aligned_cols=244 Identities=24% Similarity=0.350 Sum_probs=194.0
Q ss_pred ceecceEEEeEEecccCceEEEEEEee----CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~----~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
+....+|.+.+.||+|+||.||+|... .+..||||+++..... .+.+|+ .+++.++||||+++++++.+.+
T Consensus 45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~ 123 (325)
T 3kul_A 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA-SIMGQFDHPNIIRLEGVVTRGR 123 (325)
T ss_dssp BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEECGGG
T ss_pred ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHH-HHHHhCCCCCCCcEEEEEEeCC
Confidence 344578999999999999999999774 3557999999764322 334454 4789999999999999999999
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++||| |+.+|+|.++++.. ...+++.+++.++.|++.||+
T Consensus 124 ~~~lv~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~~L~ 165 (325)
T 3kul_A 124 LAMIVTE----------YMENGSLDTFLRTH----------------------------DGQFTIMQLVGMLRGVGAGMR 165 (325)
T ss_dssp CCEEEEE----------CCTTCBHHHHHHTT----------------------------TTCSCHHHHHHHHHHHHHHHH
T ss_pred ccEEEee----------CCCCCcHHHHHHhc----------------------------ccCCCHHHHHHHHHHHHHHHH
Confidence 9999999 77778888887532 235788899999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
|||+.+|+||||||+|||++.++ .+||+|||+++................+|+.|+|||++.+..++.++|||||||+
T Consensus 166 ~LH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i 243 (325)
T 3kul_A 166 YLSDLGYVHRDLAARNVLVDSNL--VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVV 243 (325)
T ss_dssp HHHHTTEECSCCSGGGEEECTTC--CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHH
T ss_pred HHHHCCeeCCCCCcceEEECCCC--CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHH
Confidence 99999999999999999997665 4999999999987654333333334456889999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCChH-HHHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~-~~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++++..||..... .....+.. .....+..+++++.+||.+||..||++|
T Consensus 244 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 298 (325)
T 3kul_A 244 MWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQR 298 (325)
T ss_dssp HHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhC
Confidence 99999933677766543 33333333 3455677889999999999999999998
No 38
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.3e-38 Score=336.19 Aligned_cols=239 Identities=25% Similarity=0.417 Sum_probs=185.7
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
..+.++|.+.+.||+|+||+||++...+|+.||||++..... ....+|+. +++.++||||+++++++.+++..+
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~ 95 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREIS-LLKELHHPNIVSLIDVIHSERCLT 95 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHH-HHHHCCCTTBCCEEEEECCSSCEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHH-HHHHcCCCCEeeeeeEEccCCEEE
Confidence 556688999999999999999999988899999999964321 23445554 789999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+|||+|.++|.+++ .. ....+++..+..++.|++.||+|||
T Consensus 96 lv~e~~~~~l~~~~-----------~~----------------------------~~~~~~~~~~~~~~~qi~~~l~~LH 136 (311)
T 3niz_A 96 LVFEFMEKDLKKVL-----------DE----------------------------NKTGLQDSQIKIYLYQLLRGVAHCH 136 (311)
T ss_dssp EEEECCSEEHHHHH-----------HT----------------------------CTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHH-----------Hh----------------------------ccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997665444333 21 1234788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILF 702 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIwSfGvvL~ 702 (753)
+.+|+||||||+|||++.++. +||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 137 ~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 211 (311)
T 3niz_A 137 QHRILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPV---RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211 (311)
T ss_dssp HTTEECCCCCGGGEEECTTCC--EEECCCTTCEETTSCC---C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred HCCcccCCCchHhEEECCCCC--EEEccCcCceecCCCc---ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHH
Confidence 999999999999999987765 9999999998765322 12234468999999999876 55899999999999999
Q ss_pred HHHhCCCCCCCCChH-HHHHHHHc---cCc---------------------------ccccCCCHHHHHHHHHccccCcC
Q 004442 703 FCITGGKHPYGESFE-RDANIVKD---RKD---------------------------LFLVEHIPEAVDLFTRLLDPNPD 751 (753)
Q Consensus 703 EllTG~~~Pf~~~~~-~~~~~i~~---~~~---------------------------~~~~~~s~el~dLI~~cL~~DP~ 751 (753)
||++| .+||..... .....+.. ... .....+++++.+||++||+.||+
T Consensus 212 ~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 290 (311)
T 3niz_A 212 EMITG-KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPN 290 (311)
T ss_dssp HHHHS-SCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTT
T ss_pred HHHhC-CCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChh
Confidence 99998 667765432 22211111 000 01234678999999999999999
Q ss_pred CC
Q 004442 752 LR 753 (753)
Q Consensus 752 ~R 753 (753)
+|
T Consensus 291 ~R 292 (311)
T 3niz_A 291 KR 292 (311)
T ss_dssp TS
T ss_pred HC
Confidence 98
No 39
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4e-38 Score=329.09 Aligned_cols=239 Identities=23% Similarity=0.360 Sum_probs=196.2
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEccc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~c 549 (753)
.++|++.+.||+|+||.||++...+++.||||++.... .+...+|+ .+++.++||||+++++++.+++..++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e-- 85 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEA-EVMMKLSHPKLVQLYGVCLEQAPICLVFE-- 85 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHH-HHHHTCCCTTBCCEEEEECSSSSEEEEEE--
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHH-HHHHhCCCCCEeeEEEEEecCCceEEEEE--
Confidence 46789999999999999999998889999999997643 23344555 48899999999999999999999999999
Q ss_pred cCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccc
Q 004442 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (753)
Q Consensus 550 ~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiH 629 (753)
|+++|+|.+++... ...+++..+++++.|++.||+|||+.+|+|
T Consensus 86 --------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 129 (269)
T 4hcu_A 86 --------FMEHGCLSDYLRTQ----------------------------RGLFAAETLLGMCLDVCEGMAYLEEACVIH 129 (269)
T ss_dssp --------CCTTCBHHHHHHTT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred --------eCCCCcHHHHHHhc----------------------------CcccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 77778888887532 235788899999999999999999999999
Q ss_pred cCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 004442 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGK 709 (753)
Q Consensus 630 rDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~ 709 (753)
|||||+||+++.++. +||+|||+++...... ........+|+.|+|||++.+..++.++||||||+++|||++++.
T Consensus 130 ~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~ 205 (269)
T 4hcu_A 130 RDLAARNCLVGENQV--IKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205 (269)
T ss_dssp SCCCGGGEEECGGGC--EEECCTTGGGGBCCHH--HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcchheEEEcCCCC--EEeccccccccccccc--cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCC
Confidence 999999999977654 9999999998764321 122233457889999999999999999999999999999999447
Q ss_pred CCCCCChHH-HHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 710 HPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 710 ~Pf~~~~~~-~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+||...... ....+... ....+...++++.++|.+||+.||++|
T Consensus 206 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 251 (269)
T 4hcu_A 206 IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDR 251 (269)
T ss_dssp CTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccC
Confidence 888766443 33333333 445566778999999999999999998
No 40
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=348.24 Aligned_cols=236 Identities=25% Similarity=0.377 Sum_probs=195.8
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
..++|.+.+.||+|+||.||++... +++.||||++.+.. .....+|+. +++.++|||||++++++.+.+..|
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~Iv~l~~~~~~~~~~~ 91 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQ-IMQGLEHPFLVNLWYSFQDEEDMF 91 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEEeCCEEE
Confidence 3467899999999999999998765 48999999986431 234445555 789999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++.. ...+++..+..++.||+.||.|||
T Consensus 92 lv~e----------~~~gg~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~LH 132 (384)
T 4fr4_A 92 MVVD----------LLLGGDLRYHLQQ-----------------------------NVHFKEETVKLFICELVMALDYLQ 132 (384)
T ss_dssp EEEC----------CCTTEEHHHHHHT-----------------------------TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------cCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 7777888877743 245788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC---CCCCchhhHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ---GRQTRAIDLFSLGCI 700 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~t~ksDIwSfGvv 700 (753)
+.||+||||||+|||++.++. +||+|||+++..... ......+||+.|+|||++.. ..++.++|||||||+
T Consensus 133 ~~givHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i 206 (384)
T 4fr4_A 133 NQRIIHRDMKPDNILLDEHGH--VHITDFNIAAMLPRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVT 206 (384)
T ss_dssp HTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTT----CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHH
T ss_pred HCCceeccCcHHHeEECCCCC--EEEeccceeeeccCC----CceeccCCCccccCCeeeccCCCCCCCccceeechHHH
Confidence 999999999999999977765 999999999876533 22345679999999999864 458999999999999
Q ss_pred HHHHHhCCCCCCCCC----hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGES----FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~----~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++| .+||... .......+......++..+++++.+||++||+.||++|
T Consensus 207 l~elltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R 262 (384)
T 4fr4_A 207 AYELLRG-RRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262 (384)
T ss_dssp HHHHHHS-SCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHhC-CCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHh
Confidence 9999998 6677532 33344455566677788899999999999999999998
No 41
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.5e-38 Score=334.39 Aligned_cols=241 Identities=24% Similarity=0.393 Sum_probs=189.0
Q ss_pred cceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC--c----hHHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH--H----DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~--~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
++.+.++|++.+.||+|+||.||++... .++.||||++.... . +.+.+|+ .+++.++||||+++++++.+.+
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~hp~iv~~~~~~~~~~ 84 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREV-HNSSQLSHQNIVSMIDVDEEDD 84 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHH-HHHTTCCBTTBCCEEEEEECSS
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHH-HHHhcCCCCCCceEEEeeeeCC
Confidence 4667788999999999999999999754 68999999985432 1 1233444 4778899999999999999999
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++||| |+++|+|.+++.. ...+++..++.++.|++.||+
T Consensus 85 ~~~lv~e----------~~~g~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~ 125 (294)
T 4eqm_A 85 CYYLVME----------YIEGPTLSEYIES-----------------------------HGPLSVDTAINFTNQILDGIK 125 (294)
T ss_dssp EEEEEEE----------CCCSCBHHHHHHH-----------------------------HCSCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEe----------CCCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHH
Confidence 9999999 6677888887743 235788899999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
|||+.+|+||||||+||+++.++. +||+|||+++...... ........||+.|+|||++.+..++.++|||||||+
T Consensus 126 ~lH~~~i~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~ 201 (294)
T 4eqm_A 126 HAHDMRIVHRDIKPQNILIDSNKT--LKIFDFGIAKALSETS--LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201 (294)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTSC--EEECCCSSSTTC---------------CCSSCCHHHHHTCCCCTTHHHHHHHHH
T ss_pred HHHHCCcccCCCCHHHEEECCCCC--EEEEeCCCcccccccc--ccccCccccCccccCHhHhcCCCCCchHhHHHHHHH
Confidence 999999999999999999977765 9999999998764322 122334568999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHH--HHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFERDA--NIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~~~~--~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||+|| .+||........ ..+...... ....+++++.++|.+||++||++|
T Consensus 202 l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 259 (294)
T 4eqm_A 202 LYEMLVG-EPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANR 259 (294)
T ss_dssp HHHHHHS-SCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHhC-CCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHc
Confidence 9999998 678876543332 222222221 235678999999999999999998
No 42
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.1e-38 Score=345.75 Aligned_cols=256 Identities=23% Similarity=0.341 Sum_probs=198.0
Q ss_pred ecceEEEeEEecccCceEEEEEEee--------CCcEEEEEEeecCCch----HHHHHHHHHHHhC-CCCceeeeccccc
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY--------EGRSVAVKRLVKTHHD----VALKEIQNLIASD-QHPNIVRWYGVES 537 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~--------~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l-~HpNIV~L~g~~~ 537 (753)
..++|.+.+.||+|+||.||+|... ++..||||+++..... ...+|+. +++.+ +||||++++++|.
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME-MMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHH-HHHHSCCCTTBCCEEEEEC
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHH-HHHHhcCCCCEeeEEEEEc
Confidence 3467899999999999999999753 3568999999765432 3445555 67777 8999999999999
Q ss_pred CCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 538 ~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
+.+..|+||| |+.+|+|.+++........... ..........+++.++++++.||+.
T Consensus 158 ~~~~~~lv~e----------~~~~g~L~~~l~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~qi~~ 214 (370)
T 2psq_A 158 QDGPLYVIVE----------YASKGNLREYLRARRPPGMEYS-------------YDINRVPEEQMTFKDLVSCTYQLAR 214 (370)
T ss_dssp SSSSCEEEEE----------CCTTCBHHHHHHHTCCC------------------------CCCCCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEE----------cCCCCCHHHHHHhhCCcccccc-------------ccccccccccCCHHHHHHHHHHHHH
Confidence 9999999999 7778888888875432110000 0000122346889999999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHH
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSL 697 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSf 697 (753)
||+|||+.+|+||||||+|||++.++. +||+|||+++....... ........+|+.|+|||++.+..++.++|||||
T Consensus 215 aL~~LH~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvwsl 291 (370)
T 2psq_A 215 GMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291 (370)
T ss_dssp HHHHHHHTTEECSCCCGGGEEECTTCC--EEECCCSSCEETTCCCT-TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHhCCeeccccchhhEEECCCCC--EEEccccCCcccCcccc-eecccCCCcccceECHhHhcCCCCCcHHHHHHH
Confidence 999999999999999999999977765 99999999987654321 122334457889999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCh-HHHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 698 GCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~~-~~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++|||+|++.+||.+.. ......+... ....+..+++++.++|.+||+.||++|
T Consensus 292 G~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 349 (370)
T 2psq_A 292 GVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQR 349 (370)
T ss_dssp HHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 9999999994477886653 3334444443 345667789999999999999999998
No 43
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.9e-38 Score=357.36 Aligned_cols=237 Identities=26% Similarity=0.342 Sum_probs=193.1
Q ss_pred ecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
..++|.+.+.||+|+||.||++.. .+|+.||||++.... .....+|. .+++.++||||++++++|.+.+..+
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~l~~~~~~~~~~~ 224 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN-RVLQNSRHPFLTALKYSFQTHDRLC 224 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHH-HHHHhCCCCeEeeEEEEEeeCCEEE
Confidence 346799999999999999999865 458999999996431 12233344 3678889999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+++|+|.+++.. ...+++..+..++.||+.||+|||
T Consensus 225 lv~e----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH 265 (446)
T 4ejn_A 225 FVME----------YANGGELFFHLSR-----------------------------ERVFSEDRARFYGAEIVSALDYLH 265 (446)
T ss_dssp EEEC----------CCSSCBHHHHHHH-----------------------------HSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------eCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999 7778888887743 245788899999999999999999
Q ss_pred h-CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 624 E-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 624 ~-~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
+ .+|+||||||+|||++.++. +||+|||+++..... .......+||+.|+|||++.+..++.++|||||||++|
T Consensus 266 ~~~giiHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 340 (446)
T 4ejn_A 266 SEKNVVYRDLKLENLMLDKDGH--IKITDFGLCKEGIKD---GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 340 (446)
T ss_dssp HHTCCCCCCCCGGGEEECSSSC--EEECCCCCCCTTCC--------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHH
T ss_pred hcCCEEECCCCHHHEEECCCCC--EEEccCCCceeccCC---CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHH
Confidence 8 89999999999999977764 999999999864332 12234567999999999999999999999999999999
Q ss_pred HHHhCCCCCCCC-ChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~-~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++| .+||.. ........+......++..+++++.+||.+||++||++|
T Consensus 341 ell~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R 391 (446)
T 4ejn_A 341 EMMCG-RLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQR 391 (446)
T ss_dssp HHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred HHhhC-CCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHHHh
Confidence 99998 556654 455556666677777888899999999999999999998
No 44
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=337.52 Aligned_cols=240 Identities=22% Similarity=0.322 Sum_probs=194.4
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC---------chHHHHHHHHHHHhCCCCceeeecccccC
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---------HDVALKEIQNLIASDQHPNIVRWYGVESD 538 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~ 538 (753)
..+.+.|.+.+.||+|+||.||++... +|+.||||.+.... .+...+|+. +++.++||||+++++++.+
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~ 85 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS-ILKEIQHPNVITLHEVYEN 85 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHH-HHHHCCCTTBCCEEEEEEC
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHH-HHHhCCCCCCCcEEEEEEe
Confidence 455678999999999999999999765 58999999996532 123445554 7899999999999999999
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++||| |+++|+|.+++.. ...+++.+++.++.||+.|
T Consensus 86 ~~~~~lv~e----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~a 126 (326)
T 2y0a_A 86 KTDVILILE----------LVAGGELFDFLAE-----------------------------KESLTEEEATEFLKQILNG 126 (326)
T ss_dssp SSEEEEEEE----------CCCSCBHHHHHTT-----------------------------SSCCBHHHHHHHHHHHHHH
T ss_pred CCEEEEEEE----------cCCCCCHHHHHHh-----------------------------cCCcCHHHHHHHHHHHHHH
Confidence 999999999 6667788877642 2357888999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCC--CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFS 696 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~--~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwS 696 (753)
|.|||+.+|+||||||+|||++.++ ...+||+|||+++...... ......||+.|+|||++.+..++.++||||
T Consensus 127 l~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 202 (326)
T 2y0a_A 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202 (326)
T ss_dssp HHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS----CCCCCCSCTTTCCHHHHTTCCCCTHHHHHH
T ss_pred HHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC----ccccccCCcCcCCceeecCCCCCcHHHHHH
Confidence 9999999999999999999997765 1259999999998875332 223456999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCC-hHHHHHHHHccCccc----ccCCCHHHHHHHHHccccCcCCC
Q 004442 697 LGCILFFCITGGKHPYGES-FERDANIVKDRKDLF----LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~-~~~~~~~i~~~~~~~----~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++|||++| .+||... .......+......+ ....++++.+||++||..||++|
T Consensus 203 lG~il~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 263 (326)
T 2y0a_A 203 IGVITYILLSG-ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263 (326)
T ss_dssp HHHHHHHHHHS-CCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHHHHHHC-cCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhC
Confidence 99999999999 5677554 333333333333222 35678999999999999999998
No 45
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=338.25 Aligned_cols=235 Identities=27% Similarity=0.364 Sum_probs=185.4
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
.+.++|.+.+.||+|+||+||+|... +|+.||||++.... ....+.|+..+....+|+||++++++|.+.+..+
T Consensus 54 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~ 133 (311)
T 3p1a_A 54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY 133 (311)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence 34567999999999999999999776 69999999986532 1234555555666679999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+|||+|.+ +|.+++... ...+++..+++|+.||+.||+|||
T Consensus 134 lv~e~~~~-----------~L~~~~~~~----------------------------~~~l~~~~~~~i~~qi~~aL~~LH 174 (311)
T 3p1a_A 134 LQTELCGP-----------SLQQHCEAW----------------------------GASLPEAQVWGYLRDTLLALAHLH 174 (311)
T ss_dssp EEEECCCC-----------BHHHHHHHH----------------------------CSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCC-----------CHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99996654 444444321 245888999999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+|+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++||
T Consensus 175 ~~~ivH~Dikp~NIll~~~~~--~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~e 247 (311)
T 3p1a_A 175 SQGLVHLDVKPANIFLGPRGR--CKLGDFGLLVELGTAG----AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILE 247 (311)
T ss_dssp HTTEECCCCSGGGEEECGGGC--EEECCCTTCEECC----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHH
T ss_pred HCCEecCCCCHHHEEECCCCC--EEEccceeeeecccCC----CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHH
Confidence 999999999999999977654 9999999998765322 2234468999999999876 79999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHcc--CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGESFERDANIVKDR--KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~~~~~~~~i~~~--~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|+.+|+.... ...+... ....+..+++++.+||.+||+.||++|
T Consensus 248 l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 296 (311)
T 3p1a_A 248 VACNMELPHGGEG---WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLR 296 (311)
T ss_dssp HHHTCCCCSSHHH---HHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred HHhCCCCCCCccH---HHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhC
Confidence 9999777765432 1122222 223456788999999999999999998
No 46
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.1e-38 Score=337.75 Aligned_cols=240 Identities=25% Similarity=0.369 Sum_probs=186.5
Q ss_pred eecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
....+|.+.+.||+|+||+||++.. +|+.||||++..... ..+.+|+. +++.++||||+++++++.+.+..++
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVA-IMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEECCceEE
Confidence 3456789999999999999999865 689999999965431 13344554 7899999999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++..... ...+++..++.++.|++.||+|||+
T Consensus 112 v~e----------~~~~~~L~~~l~~~~~--------------------------~~~~~~~~~~~i~~qi~~aL~~LH~ 155 (309)
T 3p86_A 112 VTE----------YLSRGSLYRLLHKSGA--------------------------REQLDERRRLSMAYDVAKGMNYLHN 155 (309)
T ss_dssp EEE----------CCTTCBHHHHHHSTTH--------------------------HHHSCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEe----------cCCCCcHHHHHhhcCC--------------------------CCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 999 7778888888764321 1237788899999999999999999
Q ss_pred CC--ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 625 IG--LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 625 ~~--IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
.+ |+||||||+|||++.++. +||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~ivH~Dikp~NIll~~~~~--~kL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 230 (309)
T 3p86_A 156 RNPPIVHRNLKSPNLLVDKKYT--VKVCDFGLSRLKASTF---LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230 (309)
T ss_dssp SSSCCCCTTCCGGGEEECTTCC--EEECCCC--------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred CCCCEECCCCChhhEEEeCCCc--EEECCCCCCccccccc---cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHH
Confidence 99 999999999999977654 9999999998654321 1223456899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCChHHHH-HHH--HccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFERDA-NIV--KDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~~~~-~~i--~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+|| ..||........ ..+ .......+..+++++.+||++||+.||++|
T Consensus 231 elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 283 (309)
T 3p86_A 231 ELATL-QQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKR 283 (309)
T ss_dssp HHHHC-CCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHhC-CCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence 99999 678876644332 222 233445677889999999999999999998
No 47
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=353.23 Aligned_cols=241 Identities=26% Similarity=0.393 Sum_probs=194.2
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
..+.+.|.+.+.||+|+||.||++.. .+|+.||+|++..... +...+|+ .+++.++||||+++++++.+.+..
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~-~il~~l~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREA-RICRLLKHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHH-HHHHHCCBTTBCCEEEEEECSSEE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHH-HHHHhCCCcCCCeEEEEEEECCEE
Confidence 45667899999999999999999865 4699999999976432 2233444 478999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
|+||| |+.+|+|.+++.. ...+++..+..++.||+.||+||
T Consensus 86 ~lv~E----------~~~gg~L~~~i~~-----------------------------~~~~~e~~~~~i~~qil~aL~~l 126 (444)
T 3soa_A 86 YLIFD----------LVTGGELFEDIVA-----------------------------REYYSEADASHCIQQILEAVLHC 126 (444)
T ss_dssp EEEEC----------CCBCCBHHHHHHH-----------------------------CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE----------eCCCCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 6667788777643 24578889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecC-CCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d-~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL 701 (753)
|+.+|+||||||+|||++.+ ....+||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++
T Consensus 127 H~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvil 203 (444)
T 3soa_A 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ---QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203 (444)
T ss_dssp HHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC---CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred HHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC---ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHH
Confidence 99999999999999999753 23469999999998765432 122345799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC-ChHHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGE-SFERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~-~~~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+|++| .+||.+ ........+......++ ..+++++.+||.+||++||++|
T Consensus 204 yell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 259 (444)
T 3soa_A 204 YILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKR 259 (444)
T ss_dssp HHHHHS-SCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHhC-CCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHC
Confidence 999999 556644 44455555555544333 3678999999999999999998
No 48
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.7e-38 Score=330.82 Aligned_cols=236 Identities=25% Similarity=0.325 Sum_probs=185.9
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
++|++.+.||+|+||+||+|... +|+.||||++..... ....+|+. +++.++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHH-HHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHH-HHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 46889999999999999999765 589999999964331 23445554 789999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
|+|.+++.+++ . .....+++..+..++.|++.||+|||+.+
T Consensus 81 e~~~~~l~~~~-----------~----------------------------~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 121 (292)
T 3o0g_A 81 EFCDQDLKKYF-----------D----------------------------SCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121 (292)
T ss_dssp ECCSEEHHHHH-----------H----------------------------HTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCHHHHH-----------H----------------------------hCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 97765544433 1 11245788899999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCC-CCchhhHHHHHHHHHHHH
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~t~ksDIwSfGvvL~Ell 705 (753)
|+||||||+|||++.++. +||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||++|||+
T Consensus 122 ivH~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 196 (292)
T 3o0g_A 122 VLHRDLKPQNLLINRNGE--LKLANFGLARAFGIPV---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196 (292)
T ss_dssp EECCCCSGGGEEECTTSC--EEECCCTTCEECCSCC---SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHT
T ss_pred eecCCCCHHHEEEcCCCC--EEEeecccceecCCcc---ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHH
Confidence 999999999999977765 9999999998765322 2223456899999999998766 799999999999999999
Q ss_pred hCCCCCCCCChHHH-HHHHHcc-----------------------------CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFERD-ANIVKDR-----------------------------KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~~~-~~~i~~~-----------------------------~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|+.+||....... ...+... ........++++++||++||+.||++|
T Consensus 197 ~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 274 (292)
T 3o0g_A 197 NAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQR 274 (292)
T ss_dssp TTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGS
T ss_pred HcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhC
Confidence 99777776654332 2222110 001123467899999999999999998
No 49
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.5e-39 Score=342.20 Aligned_cols=243 Identities=23% Similarity=0.373 Sum_probs=182.9
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc--h---HHHHHHHHHHHhCCCCceeeecccccCCc--
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--D---VALKEIQNLIASDQHPNIVRWYGVESDQD-- 540 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~--~---~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~-- 540 (753)
..+.++|.+.+.||+|+||.||++.. .+++.||||++..... . ..+.++..+++.++||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence 45667899999999999999999975 5689999999975421 1 12333334678889999999999987644
Q ss_pred --eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 541 --FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 541 --~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
..|+||| |+++|+|.++++.. ..+++.++++++.|++.|
T Consensus 88 ~~~~~lv~e----------~~~g~~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~~ 128 (311)
T 3ork_A 88 GPLPYIVME----------YVDGVTLRDIVHTE-----------------------------GPMTPKRAIEVIADACQA 128 (311)
T ss_dssp EEEEEEEEE----------CCCEEEHHHHHHHH-----------------------------CSCCHHHHHHHHHHHHHH
T ss_pred CcccEEEEe----------cCCCCCHHHHHHhc-----------------------------CCCCHHHHHHHHHHHHHH
Confidence 3499999 66677888777432 357888999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
|+|||+.+|+||||||+|||++.++. +||+|||+++................||+.|+|||++.+..++.++||||||
T Consensus 129 l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 206 (311)
T 3ork_A 129 LNFSHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206 (311)
T ss_dssp HHHHHHTTCCCCCCCGGGEEEETTSC--EEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHCCCCcCCCCHHHEEEcCCCC--EEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHH
Confidence 99999999999999999999987765 9999999998775543333334455689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHH-HHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGESFERDA-NIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~~~~~-~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||+|| .+||........ ......... ....+++++.++|.+||++||++|
T Consensus 207 ~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 265 (311)
T 3ork_A 207 CVLYEVLTG-EPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265 (311)
T ss_dssp HHHHHHHHS-SCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHhC-CCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhC
Confidence 999999998 678866544332 222222221 234588999999999999999998
No 50
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-38 Score=344.50 Aligned_cols=235 Identities=22% Similarity=0.356 Sum_probs=189.9
Q ss_pred ecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecC-----C-chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKT-----H-HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~-----~-~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
..++|.+.+.||+|+||.||+|.. .+|+.||||++... . .....+|+. +++.++||||+++++++.+.+..+
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~ 85 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREIS-YLKLLRHPHIIKLYDVITTPTDIV 85 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHH-HHHhCCCCCCCeEEEEEEeCCEEE
Confidence 346799999999999999999976 56899999998642 1 234445554 789999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+|||||. |+|.+++.. ...+++.++.+++.|++.||.|||
T Consensus 86 lv~E~~~-----------g~l~~~l~~-----------------------------~~~l~~~~~~~i~~qi~~aL~~LH 125 (336)
T 3h4j_B 86 MVIEYAG-----------GELFDYIVE-----------------------------KKRMTEDEGRRFFQQIICAIEYCH 125 (336)
T ss_dssp EEECCCC-----------EEHHHHHHH-----------------------------HCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCC-----------CcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999554 445554432 245788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-CchhhHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILF 702 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDIwSfGvvL~ 702 (753)
+.+|+||||||+|||++.++. +||+|||++...... ......+||+.|+|||++.+..+ +.++|||||||++|
T Consensus 126 ~~givH~Dlkp~NIll~~~~~--~kl~DFG~s~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 199 (336)
T 3h4j_B 126 RHKIVHRDLKPENLLLDDNLN--VKIADFGLSNIMTDG----NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLY 199 (336)
T ss_dssp HHTCCCCCCSTTTEEECTTCC--EEECCSSCTBTTTTS----BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHH
T ss_pred HCCeEecCCchhhEEEcCCCC--EEEEEeccceeccCC----cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHH
Confidence 999999999999999976654 999999999876533 22345579999999999988876 78999999999999
Q ss_pred HHHhCCCCCCCCChH-HHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~-~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++| .+||.+... .....+.......+..+++++.+||++||+.||++|
T Consensus 200 ~ll~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R 250 (336)
T 3h4j_B 200 VMLVG-RLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQR 250 (336)
T ss_dssp HHHHS-SCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGS
T ss_pred HHHhC-CCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHC
Confidence 99998 678765432 222223334455677789999999999999999998
No 51
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.9e-38 Score=351.04 Aligned_cols=239 Identities=23% Similarity=0.339 Sum_probs=191.9
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC-----CchHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~-----~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
+...++|.+.+.||+|+||+||++... +++.||||++.+. .....+.++..+++.++|||||+++++|.+.+..
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 445678999999999999999999765 5899999999642 1222344444588999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
|+||| |+++|+|.++++. ..+++..+..++.||+.||+||
T Consensus 145 ~lV~E----------~~~gg~L~~~l~~------------------------------~~~~e~~~~~~~~qi~~aL~~L 184 (410)
T 3v8s_A 145 YMVME----------YMPGGDLVNLMSN------------------------------YDVPEKWARFYTAEVVLALDAI 184 (410)
T ss_dssp EEEEC----------CCTTEEHHHHHHH------------------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------CCCCCcHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 7778888887642 2467888899999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCC----CCchhhHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGR----QTRAIDLFSLG 698 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~t~ksDIwSfG 698 (753)
|+.+|+||||||+|||++.++. +||+|||+++...... .......+||+.|+|||++.+.. ++.++||||||
T Consensus 185 H~~givHrDLKp~NILl~~~g~--ikL~DFG~a~~~~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlG 260 (410)
T 3v8s_A 185 HSMGFIHRDVKPDNMLLDKSGH--LKLADFGTCMKMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 260 (410)
T ss_dssp HHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTS--EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHH
T ss_pred HHCCeEeccCCHHHeeECCCCC--EEEeccceeEeeccCC--cccccCCcCCccccCHHHhhccCCCcCCCCcceEecch
Confidence 9999999999999999977765 9999999998775432 22334567999999999998765 78999999999
Q ss_pred HHHHHHHhCCCCCCCCC-hHHHHHHHHcc----CcccccCCCHHHHHHHHHccccCcCC
Q 004442 699 CILFFCITGGKHPYGES-FERDANIVKDR----KDLFLVEHIPEAVDLFTRLLDPNPDL 752 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~-~~~~~~~i~~~----~~~~~~~~s~el~dLI~~cL~~DP~~ 752 (753)
|++|||+|| .+||... .......+... ..+....+++++++||++||..+|++
T Consensus 261 vilyell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~r 318 (410)
T 3v8s_A 261 VFLYEMLVG-DTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVR 318 (410)
T ss_dssp HHHHHHHHS-SCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGC
T ss_pred HHHHHHHhC-CCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhh
Confidence 999999999 5566554 44444444332 22333468999999999999987766
No 52
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.7e-38 Score=342.50 Aligned_cols=241 Identities=23% Similarity=0.339 Sum_probs=180.8
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
..+.+.|.+.+.||+|+||.||++... +++.||||++........++.+..+++.++||||++++++|.+.+..++|||
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 445678999999999999999999776 4889999999865444444434447899999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+.+|+|.+++.. ...+++.+++.++.|++.||.|||+.+|
T Consensus 129 ----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~~L~~LH~~~i 169 (349)
T 2w4o_A 129 ----------LVTGGELFDRIVE-----------------------------KGYYSERDAADAVKQILEAVAYLHENGI 169 (349)
T ss_dssp ----------CCCSCBHHHHHTT-----------------------------CSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ----------eCCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6677888877643 2347888999999999999999999999
Q ss_pred cccCCCCCcEEEec-CCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 628 IHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 628 iHrDLKp~NILL~~-d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
+||||||+|||++. +.+..+||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 170 vH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 245 (349)
T 2w4o_A 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ----VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC 245 (349)
T ss_dssp CCCCCCGGGEEESSSSTTCCEEECCCC--------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred EecCCCcccEEEecCCCCCCEEEccCccccccCcc----cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHh
Confidence 99999999999975 22346999999999876432 12234568999999999999999999999999999999999
Q ss_pred CCCCCCCCCh-HH-HHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESF-ER-DANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~-~~-~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| ..||.... .. ....+...... ....+++++.+||++||..||++|
T Consensus 246 g-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 297 (349)
T 2w4o_A 246 G-FEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKR 297 (349)
T ss_dssp S-SCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred C-CCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhC
Confidence 9 55664432 22 33334333322 234678999999999999999998
No 53
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=351.60 Aligned_cols=241 Identities=23% Similarity=0.346 Sum_probs=191.6
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
+...++|.+.+.||+|+||+||++... +|+.||||++.+.. ....++++..++..++|+||+++++++.+.+..
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 344578999999999999999999775 69999999996532 112234444577889999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
||||| |+++|+|.+++... ...+++..+..++.||+.||+||
T Consensus 137 ~lVmE----------~~~gg~L~~~l~~~----------------------------~~~l~~~~~~~~~~qi~~aL~~L 178 (412)
T 2vd5_A 137 YLVME----------YYVGGDLLTLLSKF----------------------------GERIPAEMARFYLAEIVMAIDSV 178 (412)
T ss_dssp EEEEC----------CCCSCBHHHHHHHH----------------------------SSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEc----------CCCCCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 77788998888532 13578889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc-------CCCCCchhhHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL-------QGRQTRAIDLF 695 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-------~~~~t~ksDIw 695 (753)
|+.+|+||||||+|||++.++. +||+|||+++....... ......+||+.|+|||++. ...++.++|||
T Consensus 179 H~~giiHrDLKp~NILld~~g~--vkL~DFGla~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~Diw 254 (412)
T 2vd5_A 179 HRLGYVHRDIKPDNILLDRCGH--IRLADFGSCLKLRADGT--VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW 254 (412)
T ss_dssp HHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTSC--EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHH
T ss_pred HHCCeeecccCHHHeeecCCCC--EEEeechhheeccCCCc--cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhh
Confidence 9999999999999999977765 99999999988754321 2233457999999999997 35689999999
Q ss_pred HHHHHHHHHHhCCCCCCCCC-hHHHHHHHHccC-----cccccCCCHHHHHHHHHccccCcCCC
Q 004442 696 SLGCILFFCITGGKHPYGES-FERDANIVKDRK-----DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 696 SfGvvL~EllTG~~~Pf~~~-~~~~~~~i~~~~-----~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||||++|||++| .+||... .......+.... +.....+++++++||++||. ||++|
T Consensus 255 SlGvilyelltG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~R 316 (412)
T 2vd5_A 255 ALGVFAYEMFYG-QTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETR 316 (412)
T ss_dssp HHHHHHHHHHHS-SCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGC
T ss_pred HHhHHHHHHHhC-CCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-Chhhc
Confidence 999999999999 5666554 334443333211 22235789999999999999 99987
No 54
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.1e-37 Score=325.33 Aligned_cols=240 Identities=24% Similarity=0.363 Sum_probs=195.8
Q ss_pred ecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEcc
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~ 548 (753)
..++|++.+.||+|+||.||++...++..||||++.... .+...+|+. ++..++||||+++++++.+.+..++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e- 83 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQ-TMMKLSHPKLVKFYGVCSKEYPIYIVTE- 83 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSEEEEEE-
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHH-HHHhCCCCCEeeEEEEEccCCceEEEEE-
Confidence 346789999999999999999988888899999997643 234455555 7789999999999999999999999999
Q ss_pred ccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCcc
Q 004442 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (753)
Q Consensus 549 c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~Ii 628 (753)
|+++|+|.+++... ...+++.+++.++.|++.||+|||+.+|+
T Consensus 84 ---------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 126 (268)
T 3sxs_A 84 ---------YISNGCLLNYLRSH----------------------------GKGLEPSQLLEMCYDVCEGMAFLESHQFI 126 (268)
T ss_dssp ---------CCTTCBHHHHHHHH----------------------------GGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred ---------ccCCCcHHHHHHHc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 66778888877543 13478889999999999999999999999
Q ss_pred ccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCC
Q 004442 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 708 (753)
Q Consensus 629 HrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~ 708 (753)
||||||+||+++.++. +||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||+|++
T Consensus 127 H~dikp~Nil~~~~~~--~~l~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g 202 (268)
T 3sxs_A 127 HRDLAARNCLVDRDLC--VKVSDFGMTRYVLDDQY--VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLG 202 (268)
T ss_dssp ESSCSGGGEEECTTCC--EEECCTTCEEECCTTCE--EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTT
T ss_pred cCCcCcceEEECCCCC--EEEccCccceecchhhh--hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCC
Confidence 9999999999977754 99999999987754322 2223344678899999999889999999999999999999944
Q ss_pred CCCCCCChHHH-HHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 709 KHPYGESFERD-ANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 709 ~~Pf~~~~~~~-~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.+||....... ...+... ....+...++++.++|.+||+.||++|
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 249 (268)
T 3sxs_A 203 KMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKR 249 (268)
T ss_dssp CCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGS
T ss_pred CCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhC
Confidence 78887654433 3333333 334556678999999999999999998
No 55
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6e-38 Score=353.13 Aligned_cols=241 Identities=22% Similarity=0.339 Sum_probs=192.8
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
+...++|.+.+.||+|+||+||++.... ++.||||++.+.. ....++++..++..++||||++++++|.+.+..
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 4456789999999999999999997765 8899999996421 122244444578889999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
||||| |+++|+|.++|... ...+++..+..++.||+.||+||
T Consensus 150 ~lV~E----------y~~gg~L~~~l~~~----------------------------~~~l~e~~~~~~~~qi~~aL~~L 191 (437)
T 4aw2_A 150 YLVMD----------YYVGGDLLTLLSKF----------------------------EDRLPEEMARFYLAEMVIAIDSV 191 (437)
T ss_dssp EEEEC----------CCTTCBHHHHHHTT----------------------------TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------cCCCCcHHHHHHHc----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 77889999888542 24578889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc-----CCCCCchhhHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL-----QGRQTRAIDLFSL 697 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDIwSf 697 (753)
|+.+|+||||||+||||+.++. +||+|||+++....... ......+||+.|+|||++. ...++.++|||||
T Consensus 192 H~~giiHrDLKp~NILl~~~g~--vkL~DFGla~~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSl 267 (437)
T 4aw2_A 192 HQLHYVHRDIKPDNILMDMNGH--IRLADFGSCLKLMEDGT--VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSL 267 (437)
T ss_dssp HHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTSC--EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHH
T ss_pred HhCCeEecccCHHHeeEcCCCC--EEEcchhhhhhcccCCC--cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHH
Confidence 9999999999999999977765 99999999987654322 2234467999999999997 5668999999999
Q ss_pred HHHHHHHHhCCCCCCCCC-hHHHHHHHHcc--Ccccc---cCCCHHHHHHHHHccccCcCC
Q 004442 698 GCILFFCITGGKHPYGES-FERDANIVKDR--KDLFL---VEHIPEAVDLFTRLLDPNPDL 752 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~-~~~~~~~i~~~--~~~~~---~~~s~el~dLI~~cL~~DP~~ 752 (753)
||++|||++| .+||... .......+... ...++ ..+++++.+||++||..+|++
T Consensus 268 Gvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r 327 (437)
T 4aw2_A 268 GVCMYEMLYG-ETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHR 327 (437)
T ss_dssp HHHHHHHHHS-SCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGC
T ss_pred HHHHHHHHhC-CCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccc
Confidence 9999999999 5666554 34444443322 12233 458999999999999988776
No 56
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=330.98 Aligned_cols=235 Identities=29% Similarity=0.443 Sum_probs=183.6
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----------------------------chHHHHHHHHHH
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----------------------------HDVALKEIQNLI 521 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----------------------------~~~~~~Ei~~ll 521 (753)
.++|.+.+.||+|+||.||+|... +++.||||++.... .+...+|+. ++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l 90 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA-IL 90 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHH-HH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH-HH
Confidence 357899999999999999999764 58999999996542 123445555 78
Q ss_pred HhCCCCceeeecccccC--CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhh
Q 004442 522 ASDQHPNIVRWYGVESD--QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWK 599 (753)
Q Consensus 522 ~~l~HpNIV~L~g~~~~--~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (753)
+.++||||+++++++.+ .+..++||| |+.+|+|.+++ .
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e----------~~~~~~l~~~~------------------------------~ 130 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFE----------LVNQGPVMEVP------------------------------T 130 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEE----------CCTTCBSCCSS------------------------------C
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEe----------cCCCCcHHHHh------------------------------h
Confidence 99999999999999886 678999999 55566665432 1
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccc
Q 004442 600 ANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQA 679 (753)
Q Consensus 600 ~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~A 679 (753)
...+++.+++.++.||+.||+|||+.+|+||||||+|||++.++. +||+|||+++....... ......||+.|+|
T Consensus 131 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~a 205 (298)
T 2zv2_A 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH--IKIADFGVSNEFKGSDA---LLSNTVGTPAFMA 205 (298)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCTTCEECSSSSC---EECCCCSCGGGCC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCC--EEEecCCCccccccccc---cccCCcCCccccC
Confidence 245788999999999999999999999999999999999977765 99999999987754321 1234568999999
Q ss_pred cccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHccCcc--cccCCCHHHHHHHHHccccCcCCC
Q 004442 680 PEQLLQGR---QTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 680 PE~l~~~~---~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~-~~~~~i~~~~~~--~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++.+.. ++.++|||||||++|||++| .+||..... .....+...... ....+++++.+||.+||++||++|
T Consensus 206 PE~~~~~~~~~~~~~~Di~slG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 284 (298)
T 2zv2_A 206 PESLSETRKIFSGKALDVWAMGVTLYCFVFG-QCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESR 284 (298)
T ss_dssp GGGCCTTCCCEESHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTS
T ss_pred hhhhccCCCCCCCchhhhHhHHHHHHHHHHC-CCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhC
Confidence 99997765 37899999999999999998 667765533 333333333322 334688999999999999999998
No 57
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.9e-38 Score=332.88 Aligned_cols=242 Identities=26% Similarity=0.342 Sum_probs=186.7
Q ss_pred eecceEEEeEEecccCceEEEEEEe-----eCCcEEEEEEeecCCch---HHHHHHHHHHHhCCCCceeeecccccCC--
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN-----YEGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESDQ-- 539 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~-----~~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~L~g~~~~~-- 539 (753)
...++|++.+.||+|+||+||++.. .+++.||||++...... .+.+|+ .+++.++||||++++++|.+.
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI-EILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEECHHHH
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHH-HHHHhCCCCCEeeEEEEEecCCC
Confidence 3457899999999999999999863 36899999999765432 234444 478999999999999998653
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
...++||| |+++|+|.+++.... ..+++.++++++.|++.||
T Consensus 86 ~~~~lv~e----------~~~~~~L~~~l~~~~----------------------------~~~~~~~~~~~~~qi~~~l 127 (295)
T 3ugc_A 86 RNLKLIME----------YLPYGSLRDYLQKHK----------------------------ERIDHIKLLQYTSQICKGM 127 (295)
T ss_dssp TSCEEEEE----------CCTTCBHHHHHHHCG----------------------------GGCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEE----------eCCCCCHHHHHHhcc----------------------------cccCHHHHHHHHHHHHHHH
Confidence 55899999 777888888875432 2377888999999999999
Q ss_pred HHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHH
Q 004442 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 699 (753)
Q Consensus 620 ~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGv 699 (753)
+|||+.+|+||||||+|||++.++. +||+|||+++................++..|+|||++.+..++.++||||||+
T Consensus 128 ~~lH~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 205 (295)
T 3ugc_A 128 EYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 205 (295)
T ss_dssp HHHHHTTCCCSCCSGGGEEEEETTE--EEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred HHHhcCCcccCCCCHhhEEEcCCCe--EEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHH
Confidence 9999999999999999999987754 99999999988765433333334445788899999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCChHHH-----------------HH-HHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGESFERD-----------------AN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~~~~-----------------~~-~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||+|| ..|+....... .. .......+.+..+++++.++|++||+.||++|
T Consensus 206 ~l~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 276 (295)
T 3ugc_A 206 VLYELFTY-IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 276 (295)
T ss_dssp HHHHHHHT-TCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHHhc-ccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhC
Confidence 99999998 55665432221 11 11223445667889999999999999999998
No 58
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.1e-38 Score=339.60 Aligned_cols=243 Identities=22% Similarity=0.382 Sum_probs=184.3
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCc-----
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD----- 540 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~----- 540 (753)
+.++|.+.+.||+|+||.||+|... +|+.||||++..... +...+|+ .+++.++||||++++++|.+.+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREV-KALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHH-HHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHH-HHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 3467899999999999999999775 799999999974332 2334454 4789999999999999875433
Q ss_pred ----------------------------------------------------eEEEEEccccCChhhHHHHhcCChHHHh
Q 004442 541 ----------------------------------------------------FVYLSLERCTCSLNDLIYVLSGSFEEQL 568 (753)
Q Consensus 541 ----------------------------------------------------~~~LV~E~c~~~L~~liy~~~GsL~~~L 568 (753)
..++||| |+.+|+|.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e----------~~~~~~L~~~~ 152 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQ----------LCRKENLKDWM 152 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEE----------CCCSSCHHHHH
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEE----------ecCCCCHHHHH
Confidence 3899999 66678888887
Q ss_pred hhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEE
Q 004442 569 NAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648 (753)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~K 648 (753)
..... .....+..+++++.||+.||+|||+.+|+||||||+|||++.++. +|
T Consensus 153 ~~~~~--------------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~k 204 (332)
T 3qd2_B 153 NRRCS--------------------------LEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV--VK 204 (332)
T ss_dssp HTCCS--------------------------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EE
T ss_pred hcccC--------------------------ccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCC--EE
Confidence 64321 122455678999999999999999999999999999999977764 99
Q ss_pred EEeccCceeccCCCcc---------cccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 004442 649 LSDMGISKRLQGDMSC---------LTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD 719 (753)
Q Consensus 649 LsDFGla~~~~~~~~~---------~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~~ 719 (753)
|+|||+++........ ........||+.|+|||++.+..++.++|||||||++|||++| ..|+.......
T Consensus 205 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-~~~~~~~~~~~ 283 (332)
T 3qd2_B 205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS-FSTQMERVRII 283 (332)
T ss_dssp ECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSC-CCCHHHHHHHH
T ss_pred EeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHc-CCChhHHHHHH
Confidence 9999999987654211 1122345699999999999999999999999999999999998 44443222222
Q ss_pred HHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 720 ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 720 ~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
........+......++++.+||.+||+.||++|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 317 (332)
T 3qd2_B 284 TDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTER 317 (332)
T ss_dssp HHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred HHhhccCCCcccccCChhHHHHHHHHccCCCCcC
Confidence 2222222233345567889999999999999998
No 59
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.6e-37 Score=326.56 Aligned_cols=241 Identities=22% Similarity=0.334 Sum_probs=193.5
Q ss_pred eecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
...++|.+.+.||+|+||.||++...++..||||++.... .+...+|+ .++..++|+||+++++++.+.+..++|||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEA-KVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHH-HHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHH-HHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 3456789999999999999999988888899999997653 23444555 48899999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+.+|+|.+++... ...+++.++++++.|++.||+|||+.+|
T Consensus 100 ----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i 141 (283)
T 3gen_A 100 ----------YMANGCLLNYLREM----------------------------RHRFQTQQLLEMCKDVCEAMEYLESKQF 141 (283)
T ss_dssp ----------CCTTCBHHHHHHCG----------------------------GGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ----------ccCCCcHHHHHHHh----------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 77778888887532 2357888999999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG 707 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG 707 (753)
+||||||+||+++.++. +||+|||+++...... ........+|+.|+|||++.+..++.++||||||+++|||+|+
T Consensus 142 ~H~dikp~Nili~~~~~--~kl~Dfg~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~ 217 (283)
T 3gen_A 142 LHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217 (283)
T ss_dssp CCSSCSGGGEEECTTSC--EEECSTTGGGGBCCHH--HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCccceEEEcCCCC--EEEccccccccccccc--cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhC
Confidence 99999999999977654 9999999998764321 1222334468899999999999999999999999999999993
Q ss_pred CCCCCCCChHH-HHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 708 GKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 708 ~~~Pf~~~~~~-~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+.+||...... ....+... ....+...++++.++|.+||+.||++|
T Consensus 218 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 265 (283)
T 3gen_A 218 GKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 265 (283)
T ss_dssp TCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred CCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHC
Confidence 37788765433 33333333 344556678999999999999999998
No 60
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.3e-37 Score=329.20 Aligned_cols=235 Identities=24% Similarity=0.406 Sum_probs=181.4
Q ss_pred ceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
++|.+.+.||+|+||+||++...+|+.||||++.... .....+|+. +++.++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREIS-ILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHH-GGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHH-HHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 4688999999999999999988779999999996432 234455655 7789999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
+|.++|.++ +.. ....+++..+..++.|++.||+|||+.+|
T Consensus 81 ~~~~~l~~~-----------~~~----------------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (288)
T 1ob3_A 81 HLDQDLKKL-----------LDV----------------------------CEGGLESVTAKSFLLQLLNGIAYCHDRRV 121 (288)
T ss_dssp CCSEEHHHH-----------HHT----------------------------STTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCHHHH-----------HHh----------------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 766544443 321 12357788889999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC-CCCchhhHHHHHHHHHHHHh
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDIwSfGvvL~EllT 706 (753)
+||||||+|||++.++. +||+|||+++...... .......||+.|+|||++.+. .++.++|||||||++|||+|
T Consensus 122 ~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~ 196 (288)
T 1ob3_A 122 LHRDLKPQNLLINREGE--LKIADFGLARAFGIPV---RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196 (288)
T ss_dssp CCSCCCGGGEEECTTSC--EEECCTTHHHHHCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCC--EEEeECccccccCccc---cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHh
Confidence 99999999999977765 9999999998764321 122334689999999999764 58999999999999999999
Q ss_pred CCCCCCCCChHHH-HHHHHcc--C---------------------------cccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESFERD-ANIVKDR--K---------------------------DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~~~~-~~~i~~~--~---------------------------~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| .+||....... ...+... . ......+++++.+||++||+.||++|
T Consensus 197 g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 272 (288)
T 1ob3_A 197 G-TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQR 272 (288)
T ss_dssp S-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTS
T ss_pred C-CCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccC
Confidence 9 66776653322 2221110 0 01124578899999999999999998
No 61
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.1e-37 Score=333.80 Aligned_cols=234 Identities=25% Similarity=0.417 Sum_probs=190.6
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC---chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEcc
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~ 548 (753)
..|...+.||+|+||.||+|... +|+.||||++.... .+...+|+. +++.++|+||++++++|...+..++|||
T Consensus 45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e- 122 (321)
T 2c30_A 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVV-IMRDYQHFNVVEMYKSYLVGEELWVLME- 122 (321)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHH-HHTTCCCTTBCCEEEEEEETTEEEEEEC-
T ss_pred hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHH-HHHhCCCCCcceEEEEEEECCEEEEEEe-
Confidence 45778889999999999999776 69999999996533 233445554 7899999999999999999999999999
Q ss_pred ccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCcc
Q 004442 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (753)
Q Consensus 549 c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~Ii 628 (753)
|+++|+|.+++.. ..+++..+..++.|++.||+|||+.+|+
T Consensus 123 ---------~~~~~~L~~~l~~------------------------------~~l~~~~~~~i~~qi~~~L~~LH~~~iv 163 (321)
T 2c30_A 123 ---------FLQGGALTDIVSQ------------------------------VRLNEEQIATVCEAVLQALAYLHAQGVI 163 (321)
T ss_dssp ---------CCCSCBHHHHHTT------------------------------CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred ---------cCCCCCHHHHHHh------------------------------cCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 7777888877632 3478889999999999999999999999
Q ss_pred ccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCC
Q 004442 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 708 (753)
Q Consensus 629 HrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~ 708 (753)
||||||+|||++.++. +||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 164 H~Dlkp~NIll~~~~~--~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g- 237 (321)
T 2c30_A 164 HRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVP---KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG- 237 (321)
T ss_dssp CCCCSGGGEEECTTCC--EEECCCTTCEECCSSSC---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-
T ss_pred cCCCCHHHEEECCCCc--EEEeeeeeeeecccCcc---ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhC-
Confidence 9999999999977765 99999999987754321 22345699999999999999999999999999999999998
Q ss_pred CCCCCCC-hHHHHHHHHccCcc---cccCCCHHHHHHHHHccccCcCCC
Q 004442 709 KHPYGES-FERDANIVKDRKDL---FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 709 ~~Pf~~~-~~~~~~~i~~~~~~---~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.+||... .......+.....+ ....+++++.++|.+||+.||++|
T Consensus 238 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 286 (321)
T 2c30_A 238 EPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER 286 (321)
T ss_dssp SCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhC
Confidence 5566554 33333333333322 234578999999999999999998
No 62
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.6e-38 Score=342.01 Aligned_cols=240 Identities=25% Similarity=0.338 Sum_probs=193.9
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEcc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~ 548 (753)
.+.+.|.+.+.||+|+||.||++... +|+.||||++.+... ...+|+..+....+||||+++++++.+.+..|+|||
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E- 96 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE- 96 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC-
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe-
Confidence 45678999999999999999999765 589999999976542 334566655556689999999999999999999999
Q ss_pred ccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCcc
Q 004442 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (753)
Q Consensus 549 c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~Ii 628 (753)
|+.+|+|.+++.. ...+++..+..++.||+.||+|||+.+|+
T Consensus 97 ---------~~~gg~L~~~i~~-----------------------------~~~~~~~~~~~~~~qi~~al~~lH~~giv 138 (342)
T 2qr7_A 97 ---------LMKGGELLDKILR-----------------------------QKFFSEREASAVLFTITKTVEYLHAQGVV 138 (342)
T ss_dssp ---------CCCSCBHHHHHHT-----------------------------CTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred ---------CCCCCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 6667788777642 23578889999999999999999999999
Q ss_pred ccCCCCCcEEEecCC-C-CeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 629 HRDLKPQNVLISKDK-S-FCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 629 HrDLKp~NILL~~d~-~-~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
||||||+|||+..+. + ..+||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 139 HrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 215 (342)
T 2qr7_A 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT 215 (342)
T ss_dssp CSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhc
Confidence 999999999985432 1 359999999998765432 12345578999999999988889999999999999999999
Q ss_pred CCCCCCCC----ChHHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGE----SFERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~----~~~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
| .+||.. ........+......++ ..+++++.+||++||..||++|
T Consensus 216 g-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 269 (342)
T 2qr7_A 216 G-YTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQR 269 (342)
T ss_dssp S-SCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTS
T ss_pred C-CCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHC
Confidence 8 667764 23344444444444333 4678999999999999999998
No 63
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=9.6e-38 Score=337.22 Aligned_cols=237 Identities=28% Similarity=0.386 Sum_probs=173.1
Q ss_pred ceEEEe---EEecccCceEEEEEEee-CCcEEEEEEeecCCchHHHHHHHHHHHhCC-CCceeeecccccCCceEEEEEc
Q 004442 473 KLVVFN---KEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQ-HPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 473 ~~~~i~---~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~-HpNIV~L~g~~~~~~~~~LV~E 547 (753)
++|.+. +.||+|+||+||++... +|+.||||++.+.......+|+. ++..+. ||||+++++++.+++..|+|||
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~-~l~~l~~h~niv~~~~~~~~~~~~~lv~e 86 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEIT-ALKLCEGHPNIVKLHEVFHDQLHTFLVME 86 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHH-HHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHH-HHHHhcCCCCeeEEEEEEEcCCEEEEEEE
Confidence 344543 67999999999998765 58999999998766566667776 556665 9999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+.+|+|.+++.. ...+++.++..++.||+.||+|||+.+|
T Consensus 87 ----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~LH~~~i 127 (325)
T 3kn6_A 87 ----------LLNGGELFERIKK-----------------------------KKHFSETEASYIMRKLVSAVSHMHDVGV 127 (325)
T ss_dssp ----------CCCSCBHHHHHHH-----------------------------CSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------ccCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 6667888887743 2457888999999999999999999999
Q ss_pred cccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 628 IHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 628 iHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
+||||||+|||++.++ ...+||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 128 vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~ 204 (325)
T 3kn6_A 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS 204 (325)
T ss_dssp ECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred eecCCCHHHEEEecCCCcccEEEeccccceecCCCC---CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHh
Confidence 9999999999997654 3469999999998765432 22234568999999999999999999999999999999999
Q ss_pred CCCCCCCCCh--------HHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESF--------ERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~--------~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
| .+||.... ......+......++ ..+++++.+||.+||+.||++|
T Consensus 205 g-~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 262 (325)
T 3kn6_A 205 G-QVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR 262 (325)
T ss_dssp S-SCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTC
T ss_pred C-CCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHC
Confidence 8 67886532 223333444333322 3578999999999999999998
No 64
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-37 Score=327.14 Aligned_cols=234 Identities=23% Similarity=0.325 Sum_probs=170.8
Q ss_pred ceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
++|++.+.||+|+||.||++.. .+|+.||||++.... ....+.++..+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4678889999999999999975 468999999986432 1223333344789999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
|+|.+++. +++. ....+++.++++++.|++.||.|||+.+
T Consensus 93 e~~~~~l~-----------~~~~-----------------------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 132 (275)
T 2eue_A 93 EYAGNELF-----------DYIV-----------------------------QRDKMSEQEARRFFQQIISAVEYCHRHK 132 (275)
T ss_dssp ECCCEEHH-----------HHHH-----------------------------TSSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhcCCcHH-----------HHHH-----------------------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 96654443 3332 1245788899999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-CchhhHHHHHHHHHHHH
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCI 705 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDIwSfGvvL~Ell 705 (753)
|+||||||+||+++.++. +||+|||++....... ......||+.|+|||++.+..+ +.++|||||||++|||+
T Consensus 133 i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 206 (275)
T 2eue_A 133 IVHRDLKPENLLLDEHLN--VKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206 (275)
T ss_dssp CCCCCCSGGGEEECTTSC--EEECCSSCC-------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHH
T ss_pred CeeccCChHhEEECCCCC--EEEeecccceeccCcc----cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHH
Confidence 999999999999977654 9999999998764322 1234468999999999988776 79999999999999999
Q ss_pred hCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+| +.||... .......+.......+..+++++.+||++||+.||++|
T Consensus 207 ~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 254 (275)
T 2eue_A 207 CR-RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNR 254 (275)
T ss_dssp HS-SCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred hC-CCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhhcCHhHC
Confidence 98 6677655 34445556666777888899999999999999999998
No 65
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=334.02 Aligned_cols=240 Identities=23% Similarity=0.386 Sum_probs=188.3
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc---hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
.++|.+.+.||+|+||+||++... +++.||+|++..... +.+.+|+ .+++.++||||+++++++.+++..++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEV-KVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHH-HHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 367889999999999999999764 589999999865432 2334454 47899999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+.+|+|.+++... ...+++.++++++.|++.||+|||+.+|
T Consensus 88 ----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~al~~lH~~~i 129 (310)
T 3s95_A 88 ----------YIKGGTLRGIIKSM----------------------------DSQYPWSQRVSFAKDIASGMAYLHSMNI 129 (310)
T ss_dssp ----------CCTTCBHHHHHHHC----------------------------CTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------ecCCCcHHHHHHhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 77788888887542 2357888999999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc-----------ccCccCCCCccccccccccCCCCCchhhHHH
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL-----------TQNATGYGSSGWQAPEQLLQGRQTRAIDLFS 696 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~-----------~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwS 696 (753)
+||||||+|||++.++. +||+|||+++......... .......||+.|+|||++.+..++.++||||
T Consensus 130 vH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 207 (310)
T 3s95_A 130 IHRDLNSHNCLVRENKN--VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFS 207 (310)
T ss_dssp ECSCCSTTSEEECTTSC--EEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHH
T ss_pred cCCCCCcCeEEECCCCC--EEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHH
Confidence 99999999999977655 9999999998775432211 1112457999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCChHHH----HHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 697 LGCILFFCITGGKHPYGESFERD----ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~~~~----~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++|||++| ..|+....... ...........+..+++++.++|.+||+.||++|
T Consensus 208 lG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 267 (310)
T 3s95_A 208 FGIVLCEIIGR-VNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKR 267 (310)
T ss_dssp HHHHHHHHHHT-CCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHhcC-CCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhC
Confidence 99999999998 55654321110 0011111123456788999999999999999998
No 66
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=346.35 Aligned_cols=243 Identities=17% Similarity=0.171 Sum_probs=189.1
Q ss_pred eecceEEEeEEecccCceEEEEE------EeeCCcEEEEEEeecCCchHHHHHHHHHHHhCC---CCceeeecccccCCc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLE------GNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQ---HPNIVRWYGVESDQD 540 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka------~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~---HpNIV~L~g~~~~~~ 540 (753)
...+.|.+.+.||+|+||+||+| ....++.||||++.........+|.. ++..++ |+||+++++++.+.+
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~-~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQ-LMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHH-HHHHSCGGGGGGBCCEEEEEECSS
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHH-HHHHhhhhhhhhhhhhheeeecCC
Confidence 34577999999999999999999 45568999999998776666666655 556666 999999999999999
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++||| |+++|+|.++++.... .....+++..++.|+.||+.||+
T Consensus 141 ~~~lv~e----------~~~~g~L~~~l~~~~~------------------------~~~~~l~~~~~~~i~~qi~~~L~ 186 (365)
T 3e7e_A 141 GSVLVGE----------LYSYGTLLNAINLYKN------------------------TPEKVMPQGLVISFAMRMLYMIE 186 (365)
T ss_dssp CEEEEEC----------CCCSCBHHHHHHHHHT------------------------STTCSCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEe----------ccCCCcHHHHHHHhhc------------------------ccccCCCHHHHHHHHHHHHHHHH
Confidence 9999999 7778899988875432 12356899999999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecC---------CCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCch
Q 004442 621 HLHEIGLIHRDLKPQNVLISKD---------KSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRA 691 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d---------~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~k 691 (753)
|||+.+|+||||||+|||++.+ ....+||+|||+|+.+.... ........+||+.|+|||++.+..++.+
T Consensus 187 ~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 265 (365)
T 3e7e_A 187 QVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFP-KGTIFTAKCETSGFQCVEMLSNKPWNYQ 265 (365)
T ss_dssp HHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSC-TTEEECCSSCTTSCCCHHHHTTCCBSTH
T ss_pred HHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccC-CCceeeeecCCCCCCChHHhcCCCCCcc
Confidence 9999999999999999999770 12459999999998764221 1223345679999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCccc-ccCCCHHHHHHHHHccccCcCCC
Q 004442 692 IDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLF-LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 692 sDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~-~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||||||++|||+|| ++||......... ....+ ....++.+.+++.+||+.+|.+|
T Consensus 266 ~DiwslG~il~elltg-~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~p~~r 323 (365)
T 3e7e_A 266 IDYFGVAATVYCMLFG-TYMKVKNEGGECK----PEGLFRRLPHLDMWNEFFHVMLNIPDCHH 323 (365)
T ss_dssp HHHHHHHHHHHHHHHS-SCCCEEEETTEEE----ECSCCTTCSSHHHHHHHHHHHHCCCCTTC
T ss_pred ccHHHHHHHHHHHHhC-CCccccCCCCcee----echhccccCcHHHHHHHHHHHcCCCCCCc
Confidence 9999999999999999 5566432211100 00111 11235678899999999999887
No 67
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.8e-37 Score=357.62 Aligned_cols=241 Identities=25% Similarity=0.365 Sum_probs=200.5
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
..+.|.+.+.||+|+||.||++... +|+.||||++.+.. .....+|.. +++.++||||+++++++.+.+..|
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~-iL~~l~hp~Iv~l~~~~~~~~~l~ 261 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK-ILAKVHSRFIVSLAYAFETKTDLC 261 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHH-HHHhcCCCCEeeEEEEEeeCCEEE
Confidence 3477999999999999999999775 59999999996432 223444554 788999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+++|+|.+++..... ....+++..++.++.||+.||+|||
T Consensus 262 lVmE----------~~~gg~L~~~l~~~~~-------------------------~~~~l~e~~~~~~~~qi~~aL~~LH 306 (543)
T 3c4z_A 262 LVMT----------IMNGGDIRYHIYNVDE-------------------------DNPGFQEPRAIFYTAQIVSGLEHLH 306 (543)
T ss_dssp EEEC----------CCTTCBHHHHHHTSST-------------------------TSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------eccCCCHHHHHHHhhc-------------------------ccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999 7778888888754321 1345888999999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+|+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++||
T Consensus 307 ~~gIvHrDLKP~NILl~~~g~--vkL~DFGla~~~~~~~---~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilye 381 (543)
T 3c4z_A 307 QRNIIYRDLKPENVLLDDDGN--VRISDLGLAVELKAGQ---TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381 (543)
T ss_dssp HTTEECCCCCGGGEEECTTSC--EEECCCTTCEECCTTC---CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred HcCCcccCCChHHEEEeCCCC--EEEeecceeeeccCCC---cccccccCCccccChhhhcCCCCChHHhcCcchHHHHH
Confidence 999999999999999977765 9999999998875432 12234579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCC-----hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGES-----FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~-----~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+|| .+||... .......+......++..+++++.+||++||++||++|
T Consensus 382 lltG-~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R 435 (543)
T 3c4z_A 382 MIAA-RGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435 (543)
T ss_dssp HHHS-SCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHhC-CCCCCCCccchhHHHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHC
Confidence 9998 6677653 23444555566667788899999999999999999998
No 68
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.5e-38 Score=338.25 Aligned_cols=239 Identities=25% Similarity=0.387 Sum_probs=189.2
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
+.++|.+.+.||+|+||+||++... +++.||||++..... +...+|+. +++.++|+||+++++++.+.+..++|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC-INKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHH-HHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHH-HHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 3467999999999999999999765 689999999864432 23344554 78999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.+++.. ...+++.++++++.||+.||+|||+.
T Consensus 84 ~e----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~aL~~LH~~ 124 (323)
T 3tki_A 84 LE----------YCSGGELFDRIEP-----------------------------DIGMPEPDAQRFFHQLMAGVVYLHGI 124 (323)
T ss_dssp EE----------CCTTEEGGGGSBT-----------------------------TTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE----------cCCCCcHHHHHhh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 5666777766532 23578889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-CchhhHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFC 704 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDIwSfGvvL~El 704 (753)
+|+||||||+|||++.++. +||+|||+++....... .......+||+.|+|||++.+..+ +.++|||||||++|||
T Consensus 125 givH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 201 (323)
T 3tki_A 125 GITHRDIKPENLLLDERDN--LKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201 (323)
T ss_dssp TEECSCCSGGGEEECTTCC--EEECCCTTCEECEETTE-ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHH
T ss_pred CccccccchHHEEEeCCCC--EEEEEeeccceeccCCc-ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHH
Confidence 9999999999999977765 99999999987643221 122234579999999999988775 7899999999999999
Q ss_pred HhCCCCCCCCChHH--HHHHHHccC--cccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 ITGGKHPYGESFER--DANIVKDRK--DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lTG~~~Pf~~~~~~--~~~~i~~~~--~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++| .+||...... ......... ......+++++.+||.+||+.||++|
T Consensus 202 l~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 253 (323)
T 3tki_A 202 LAG-ELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253 (323)
T ss_dssp HHS-SCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred HhC-CCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhC
Confidence 998 6788654332 222222222 22335688999999999999999998
No 69
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.8e-37 Score=340.22 Aligned_cols=237 Identities=26% Similarity=0.361 Sum_probs=183.3
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEcc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~ 548 (753)
.++|.+.+.||+|+||+||++... +++.||||++.... .+...+|+. +++.++||||+++++++.+.+..++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~lv~e- 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREII-NHRSLRHPNIVRFKEVILTPTHLAIIME- 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEEEEEE-
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHH-HHHhCCCCCCCcEEEEEeeCCEEEEEEE-
Confidence 467899999999999999999765 68999999997543 344555655 7799999999999999999999999999
Q ss_pred ccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCcc
Q 004442 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (753)
Q Consensus 549 c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~Ii 628 (753)
|+.+|+|.+++.. ...+++..+..++.|++.||+|||+.+|+
T Consensus 97 ---------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~ql~~~L~~LH~~~iv 138 (361)
T 3uc3_A 97 ---------YASGGELYERICN-----------------------------AGRFSEDEARFFFQQLLSGVSYCHSMQIC 138 (361)
T ss_dssp ---------CCCSCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ---------eCCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 6677888877743 24578889999999999999999999999
Q ss_pred ccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCch-hhHHHHHHHHHHHHhC
Q 004442 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRA-IDLFSLGCILFFCITG 707 (753)
Q Consensus 629 HrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~k-sDIwSfGvvL~EllTG 707 (753)
||||||+|||++.++...+||+|||+++..... ......+||+.|+|||++.+..++.+ +|||||||++|||++|
T Consensus 139 H~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 214 (361)
T 3uc3_A 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214 (361)
T ss_dssp SCCCCGGGEEECSSSSCCEEECCCCCC-------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCHHHEEEcCCCCceEEEeecCcccccccc----CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhC
Confidence 999999999997776556999999999754322 12234569999999999988887655 9999999999999998
Q ss_pred CCCCCCCCh-----HHHHHHHHccCcccc--cCCCHHHHHHHHHccccCcCCC
Q 004442 708 GKHPYGESF-----ERDANIVKDRKDLFL--VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 708 ~~~Pf~~~~-----~~~~~~i~~~~~~~~--~~~s~el~dLI~~cL~~DP~~R 753 (753)
++||.... ......+.......+ ..+++++++||.+||+.||++|
T Consensus 215 -~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 266 (361)
T 3uc3_A 215 -AYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATR 266 (361)
T ss_dssp -SCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTS
T ss_pred -CCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHC
Confidence 67876532 222233333333333 3578999999999999999998
No 70
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=345.14 Aligned_cols=249 Identities=23% Similarity=0.290 Sum_probs=196.5
Q ss_pred ecceEEEeEEecccCceEEEEEEe------eCCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
..++|.+.+.||+|+||+||+|.. ..++.||||++..... ..+.+|+. +++.++||||+++++++.+.+
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSSS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHH-HHHhCCCCCCCeEEEEEecCC
Confidence 356789999999999999999873 2477999999965432 23445554 788999999999999999999
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++||| |+.+|+|.+++....... .....+++.++++++.||+.||+
T Consensus 148 ~~~lv~e----------~~~~g~L~~~l~~~~~~~----------------------~~~~~~~~~~~~~i~~qi~~aL~ 195 (367)
T 3l9p_A 148 PRFILLE----------LMAGGDLKSFLRETRPRP----------------------SQPSSLAMLDLLHVARDIACGCQ 195 (367)
T ss_dssp SCEEEEE----------CCTTEEHHHHHHHHSCCS----------------------SSCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEE----------eCCCCCHHHHHHhhcccc----------------------CccccccHHHHHHHHHHHHHHHH
Confidence 9999999 677788888886543211 11245888999999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 699 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGv 699 (753)
|||+.+|+||||||+|||++.++ ...+||+|||+++...... .........||+.|+|||++.+..++.++|||||||
T Consensus 196 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~ 274 (367)
T 3l9p_A 196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG-YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 274 (367)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHS-SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred HHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccccccc-ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHH
Confidence 99999999999999999997543 3469999999998653221 111223345799999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCChHH-HHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~~~-~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||+|++.+||...... ....+... ....+..+++++.+||.+||+.||++|
T Consensus 275 il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 330 (367)
T 3l9p_A 275 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 330 (367)
T ss_dssp HHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHC
Confidence 9999999447788765443 33334433 345567789999999999999999998
No 71
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.3e-37 Score=351.78 Aligned_cols=242 Identities=23% Similarity=0.364 Sum_probs=195.5
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
....+.|.+.+.||+|+||.||+|...++..||||+++... .+.+.+|+ .+++.++|||||++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEA-NVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHH-HHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHH-HHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 34456789999999999999999988888999999997643 23444555 4889999999999999986 56789999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+.+|+|.++|+... ...+++..+++++.|||.||+|||+++
T Consensus 262 e----------~~~~g~L~~~l~~~~---------------------------~~~~~~~~~~~~~~qi~~~l~~LH~~~ 304 (454)
T 1qcf_A 262 E----------FMAKGSLLDFLKSDE---------------------------GSKQPLPKLIDFSAQIAEGMAFIEQRN 304 (454)
T ss_dssp C----------CCTTCBHHHHHHSHH---------------------------HHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred e----------ecCCCcHHHHHHhcc---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 778889999886432 124677888999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
|+||||||+|||++.++ .+||+|||+++...... ........+|..|+|||++....++.++|||||||++|||+|
T Consensus 305 ivHrDlkp~Nill~~~~--~~kl~DFG~a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t 380 (454)
T 1qcf_A 305 YIHRDLRAANILVSASL--VCKIADFGLARVIEDNE--YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380 (454)
T ss_dssp CCCSSCSGGGEEECTTC--CEEECSTTGGGGBCCHH--HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCHHHEEECCCC--cEEEeeCCCceEcCCCc--eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHh
Confidence 99999999999997765 49999999998764321 112223346889999999999999999999999999999999
Q ss_pred CCCCCCCCChH-HHHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~~-~~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++.+||.+... .....+.. ...+.+..+++++.+||.+||+.||++|
T Consensus 381 ~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 429 (454)
T 1qcf_A 381 YGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEER 429 (454)
T ss_dssp TSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHC
Confidence 44788876533 33333333 3445667889999999999999999998
No 72
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.9e-37 Score=366.95 Aligned_cols=236 Identities=23% Similarity=0.327 Sum_probs=198.8
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC------CchHHHHHHHHHHHh-CCCCceeeecccccCCceEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT------HHDVALKEIQNLIAS-DQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~------~~~~~~~Ei~~ll~~-l~HpNIV~L~g~~~~~~~~~ 543 (753)
..+|.+.+.||+|+||.||++... +++.||||++++. ..+....|.. ++.. .+|+||+++++++.+.+.+|
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~-~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR-VLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHH-HHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHH-HHHhccCCCeEEEEEEEEEeCCEEE
Confidence 356899999999999999999765 5889999999742 2233455555 4454 48999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
|||| |+.+|+|.++++.. ..+++..++.++.||+.||+|||
T Consensus 419 lV~E----------~~~gg~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~aL~~LH 459 (674)
T 3pfq_A 419 FVME----------YVNGGDLMYHIQQV-----------------------------GRFKEPHAVFYAAEIAIGLFFLQ 459 (674)
T ss_dssp EEEE----------CCCSCBHHHHHHHH-----------------------------SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------CcCCCcHHHHHHhc-----------------------------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 77888998887532 35788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+|+||||||+||||+.++. +||+|||+++...... ......+||+.|+|||++.+..++.++|||||||+|||
T Consensus 460 ~~gIiHrDLKp~NILl~~~g~--ikL~DFGla~~~~~~~---~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilye 534 (674)
T 3pfq_A 460 SKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 534 (674)
T ss_dssp HTSEECCCCCSTTEEECSSSC--EEECCCTTCEECCCTT---CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHH
T ss_pred hCCeEeccCChhhEEEcCCCc--EEEeecceeeccccCC---cccccccCCCcccCHhhhcCCCCCccceEechHHHHHH
Confidence 999999999999999977765 9999999998653321 23345679999999999999999999999999999999
Q ss_pred HHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++| .+||.+. .......+......++..+++++.+||++||++||++|
T Consensus 535 lltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R 584 (674)
T 3pfq_A 535 MLAG-QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 584 (674)
T ss_dssp HHHS-SCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHHHHHHSCSSSTTC
T ss_pred HHcC-CCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHccCCHHHC
Confidence 9999 5666554 55566777777788889999999999999999999998
No 73
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.4e-38 Score=346.08 Aligned_cols=241 Identities=25% Similarity=0.357 Sum_probs=194.2
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
..++|.+.+.||+|+||.||+|... +++.||||.++..... .+.+|+ .+++.++||||++++|+|.+++..++|
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA-RILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHH-HHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHH-HHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 3467889999999999999999876 6899999999754322 233454 478999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.++++... ..+++..+++++.||+.||+|||+.
T Consensus 191 ~e----------~~~~g~L~~~l~~~~----------------------------~~~~~~~~~~~~~qi~~~l~~LH~~ 232 (377)
T 3cbl_A 191 ME----------LVQGGDFLTFLRTEG----------------------------ARLRVKTLLQMVGDAAAGMEYLESK 232 (377)
T ss_dssp EE----------CCTTCBHHHHHHHHG----------------------------GGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE----------cCCCCCHHHHHHhcC----------------------------CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 777888888886432 2467888999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
+|+||||||+|||++.++. +||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||+
T Consensus 233 ~ivHrDlkp~Nil~~~~~~--~kl~DfG~s~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 309 (377)
T 3cbl_A 233 CCIHRDLAARNCLVTEKNV--LKISDFGMSREEADGVY-AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309 (377)
T ss_dssp TEECSCCSGGGEEECTTCC--EEECCGGGCEECTTSEE-ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred CcCCcccCHHHEEEcCCCc--EEECcCCCceecCCCce-eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999977754 99999999987543211 11111223577899999999899999999999999999999
Q ss_pred hCCCCCCCCChHHH-HHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFERD-ANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~~~-~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++..||....... ...+.. ...+.+..+++++.+||.+||+.||++|
T Consensus 310 t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 359 (377)
T 3cbl_A 310 SLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQR 359 (377)
T ss_dssp TTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhC
Confidence 94478887764433 333333 3345667788999999999999999998
No 74
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.1e-37 Score=322.05 Aligned_cols=240 Identities=24% Similarity=0.357 Sum_probs=192.6
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
.+.++|.+.+.||+|+||.||++... +|+.||||++..... ...+..+..+++.++||||+++++++.+.+..++
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 45678999999999999999998764 589999999965431 1223333347889999999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++.. ...+++..+..++.|++.||.|||+
T Consensus 83 v~e----------~~~~~~l~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~ 123 (284)
T 3kk8_A 83 VFD----------LVTGGELFEDIVA-----------------------------REFYSEADASHCIQQILESIAYCHS 123 (284)
T ss_dssp EEC----------CCCSCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe----------cCCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 6667777776643 2457888999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCC-CeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKS-FCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~-~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
.+|+||||||+||+++.++. ..+||+|||++....... ......||+.|+|||++.+..++.++||||||+++|+
T Consensus 124 ~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 199 (284)
T 3kk8_A 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 199 (284)
T ss_dssp TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC----BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc----cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHH
Confidence 99999999999999976543 458999999998765432 2234568999999999999999999999999999999
Q ss_pred HHhCCCCCCCCC-hHHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGES-FERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~-~~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++| .+||... .......+.......+ ..+++++.+||.+||+.||++|
T Consensus 200 l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 253 (284)
T 3kk8_A 200 LLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR 253 (284)
T ss_dssp HHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTS
T ss_pred HHHC-CCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhC
Confidence 9999 5566544 4444444444433322 4678999999999999999998
No 75
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.4e-38 Score=345.48 Aligned_cols=242 Identities=26% Similarity=0.365 Sum_probs=180.7
Q ss_pred ecceEEEeEEecccCceEEEEEEee----CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~----~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
...+|.+.+.||+|+||.||+|... .+..||||+++..... .+.+|+ .+++.++||||++++++|.+.+..
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-SIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEECSSSSC
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEeeCCce
Confidence 3456788899999999999998765 5788999999754322 234444 478999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+++|+|.++++.. ...+++.++++++.||+.||+||
T Consensus 122 ~lv~e----------~~~~~sL~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~aL~~L 163 (373)
T 2qol_A 122 MIVTE----------YMENGSLDSFLRKH----------------------------DAQFTVIQLVGMLRGIASGMKYL 163 (373)
T ss_dssp EEEEE----------CCTTCBHHHHHHTT----------------------------TTCSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------CCCCCcHHHHHHhC----------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 77788888887532 23578889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
|+.+|+||||||+|||++.++ .+||+|||+++................+|+.|+|||++.+..++.++|||||||++|
T Consensus 164 H~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ 241 (373)
T 2qol_A 164 SDMGYVHRDLAARNILINSNL--VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241 (373)
T ss_dssp HHTTCCCSCCCGGGEEECTTC--CEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HHCCeeCCCCCcceEEEcCCC--CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHH
Confidence 999999999999999997665 499999999987754332222222334578899999999999999999999999999
Q ss_pred HHHhCCCCCCCCCh-HHHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~-~~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++.+..||.... ......+... ..+.+..+++++.++|.+||+.||++|
T Consensus 242 ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 294 (373)
T 2qol_A 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294 (373)
T ss_dssp HHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGS
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhC
Confidence 99983366775543 3333333333 334556788999999999999999998
No 76
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-37 Score=342.93 Aligned_cols=242 Identities=21% Similarity=0.329 Sum_probs=195.4
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc--hHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
..+.+.|.+.+.||+|+||.||+|... +|+.||+|.+..... ...+.++..+++.++||||+++++++.+.+..++|
T Consensus 47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred CccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 345578999999999999999999765 589999999976532 22333334478999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+.+|+|.+++... ...+++.+++.++.||+.||+|||+.
T Consensus 127 ~E----------~~~gg~L~~~l~~~----------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~ 168 (387)
T 1kob_A 127 LE----------FLSGGELFDRIAAE----------------------------DYKMSEAEVINYMRQACEGLKHMHEH 168 (387)
T ss_dssp EE----------CCCCCBHHHHTTCT----------------------------TCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE----------cCCCCcHHHHHHhh----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99 77778888877432 23578889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
+|+||||||+|||++.++...+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||+
T Consensus 169 givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 244 (387)
T 1kob_A 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI----VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL 244 (387)
T ss_dssp TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC----EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH
T ss_pred CeeecccchHHeEEecCCCCceEEEecccceecCCCcc----eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHH
Confidence 99999999999999765556699999999998754321 12346899999999999999999999999999999999
Q ss_pred hCCCCCCCCChH-HHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFE-RDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~-~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|| .+||..... .....+...... ....+++++.+||++||..||++|
T Consensus 245 tg-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 296 (387)
T 1kob_A 245 SG-LSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKR 296 (387)
T ss_dssp HS-CCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred hC-CCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHC
Confidence 98 667765533 333333333322 234678999999999999999998
No 77
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.8e-37 Score=345.13 Aligned_cols=237 Identities=23% Similarity=0.327 Sum_probs=182.6
Q ss_pred ceEEEe-EEecccCceEEEEEEee-CCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccC----CceEEEEE
Q 004442 473 KLVVFN-KEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYLSL 546 (753)
Q Consensus 473 ~~~~i~-~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~----~~~~~LV~ 546 (753)
+.|.+. +.||+|+||+||++... +|+.||||++... ....+|+..+....+|+||+++++++.. .+..||||
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~ 138 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence 345554 78999999999999765 5899999999753 4566777766678899999999998764 67789999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+.+|+|.+++.... ...+++.++..|+.||+.||.|||+.+
T Consensus 139 E----------~~~gg~L~~~l~~~~---------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ 181 (400)
T 1nxk_A 139 E----------CLDGGELFSRIQDRG---------------------------DQAFTEREASEIMKSIGEAIQYLHSIN 181 (400)
T ss_dssp E----------CCCSEEHHHHHHCC------------------------------CCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred E----------eCCCCcHHHHHHHhC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9 667788888775421 235788899999999999999999999
Q ss_pred ccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 627 LIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
|+||||||+|||++.++ +..+||+|||+++..... ......+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 182 ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 257 (400)
T 1nxk_A 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH----NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 257 (400)
T ss_dssp EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH
T ss_pred ccccCcCcceEEEecCCCCccEEEEecccccccCCC----CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH
Confidence 99999999999997632 356999999999876432 1224557899999999999999999999999999999999
Q ss_pred hCCCCCCCCChH-----HHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFE-----RDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~-----~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
+| .+||..... .....+......++ ..+++++.+||++||+.||++|
T Consensus 258 ~g-~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 313 (400)
T 1nxk_A 258 CG-YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR 313 (400)
T ss_dssp HS-SCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred hC-CCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHC
Confidence 99 567754321 12333333333322 4678999999999999999998
No 78
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.9e-37 Score=348.54 Aligned_cols=238 Identities=26% Similarity=0.353 Sum_probs=192.1
Q ss_pred eecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccCCc-eEEEEEcc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQD-FVYLSLER 548 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~-~~~LV~E~ 548 (753)
...+.|.+.+.||+|+||.||++.. .|+.||||+++.......+.++..+++.++||||++++++|.+.+ ..++|||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e- 267 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE- 267 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE-
T ss_pred cChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE-
Confidence 3456789999999999999999865 478999999986654444444445889999999999999987655 7999999
Q ss_pred ccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCcc
Q 004442 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (753)
Q Consensus 549 c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~Ii 628 (753)
|+.+|+|.++++... ...+++..+++++.||+.||+|||+++|+
T Consensus 268 ---------~~~~g~L~~~l~~~~---------------------------~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 311 (450)
T 1k9a_A 268 ---------YMAKGSLVDYLRSRG---------------------------RSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311 (450)
T ss_dssp ---------CCTTCBHHHHHHHHC---------------------------TTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred ---------ecCCCcHHHHHHhcC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 777889998886432 12367888999999999999999999999
Q ss_pred ccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCC
Q 004442 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 708 (753)
Q Consensus 629 HrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~ 708 (753)
||||||+|||++.++. +||+|||+++..... .....++..|+|||++.+..++.++|||||||++|||+|++
T Consensus 312 HrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g 383 (450)
T 1k9a_A 312 HRDLAARNVLVSEDNV--AKVSDFGLTKEASST------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 383 (450)
T ss_dssp CSCCCGGGEEECTTSC--EEECCCTTCEECC------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCCHhhEEECCCCC--EEEeeCCCccccccc------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999977654 999999999865322 12235788999999999999999999999999999999933
Q ss_pred CCCCCCChH-HHHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 709 KHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 709 ~~Pf~~~~~-~~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
..||..... .....+.. .....+..+++++.+||.+||+.||++|
T Consensus 384 ~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~R 430 (450)
T 1k9a_A 384 RVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATR 430 (450)
T ss_dssp CCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHC
Confidence 778876532 33333333 3445677889999999999999999998
No 79
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.4e-38 Score=329.87 Aligned_cols=238 Identities=24% Similarity=0.318 Sum_probs=194.7
Q ss_pred ecceEEEeEEecccCceEEEEEEeeC-C-------cEEEEEEeecCCc--hHHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNYE-G-------RSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~~-g-------~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
..++|.+.+.||+|+||+||++.... + ..||+|++..... ...+.++..+++.++||||+++++++.+.+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 35678999999999999999986653 3 5799999965432 233334445889999999999999999999
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++||| |+.+|+|.+++.... ..+++..+++++.||+.||.
T Consensus 86 ~~~lv~e----------~~~~~~L~~~l~~~~----------------------------~~~~~~~~~~i~~qi~~~L~ 127 (289)
T 4fvq_A 86 ENILVQE----------FVKFGSLDTYLKKNK----------------------------NCINILWKLEVAKQLAAAMH 127 (289)
T ss_dssp CCEEEEE----------CCTTCBHHHHHHHTG----------------------------GGCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEE----------CCCCCCHHHHHHhCC----------------------------CCCCHHHHHHHHHHHHHHHH
Confidence 9999999 667788888875421 23678888999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCCC------eEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhh
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKSF------CAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAID 693 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~~------~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksD 693 (753)
|||+.+|+||||||+|||++.++.. .+||+|||++...... ....||+.|+|||++.+ ..++.++|
T Consensus 128 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~D 200 (289)
T 4fvq_A 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-------DILQERIPWVPPECIENPKNLNLATD 200 (289)
T ss_dssp HHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-------HHHHHTTTTSCHHHHHCGGGCCHHHH
T ss_pred HHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-------cccCCcCcccCHHHhCCCCCCCchhH
Confidence 9999999999999999999877642 2899999998755321 12236889999999987 67899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 694 LFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 694 IwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||||||++|||++|+.+||..................+...++++.+||.+||+.||++|
T Consensus 201 iwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 260 (289)
T 4fvq_A 201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHR 260 (289)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGS
T ss_pred HHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence 999999999999987888887766555555555666677788999999999999999998
No 80
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.3e-37 Score=321.08 Aligned_cols=236 Identities=26% Similarity=0.388 Sum_probs=190.8
Q ss_pred eecceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCC---chHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
.+.++|.+.+.||+|+||.||++.... +..||+|++.... .+...+|+ .+++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI-EIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHH-HHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHH-HHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 456789999999999999999997654 7899999996532 23344454 478999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+.+|+|.+++.. ...+++.++++++.|++.||+|||+.
T Consensus 85 ~e----------~~~~~~L~~~~~~-----------------------------~~~~~~~~~~~i~~~i~~~l~~lH~~ 125 (277)
T 3f3z_A 85 ME----------LCTGGELFERVVH-----------------------------KRVFRESDAARIMKDVLSAVAYCHKL 125 (277)
T ss_dssp EE----------CCCSCBHHHHHHH-----------------------------HCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred Ee----------ccCCCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 6667777776643 24578889999999999999999999
Q ss_pred CccccCCCCCcEEE---ecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLI---SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 626 ~IiHrDLKp~NILL---~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
+|+||||||+||++ +.++ .+||+|||++....... ......||+.|+|||++.+. ++.++||||||+++|
T Consensus 126 ~i~H~dlkp~Nil~~~~~~~~--~~~l~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~ 198 (277)
T 3f3z_A 126 NVAHRDLKPENFLFLTDSPDS--PLKLIDFGLAARFKPGK----MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMY 198 (277)
T ss_dssp TEECCCCSGGGEEESSSSTTC--CEEECCCTTCEECCTTS----CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHH
T ss_pred CccCCCCCHHHEEEecCCCCC--cEEEEecccceeccCcc----chhccCCCCCccChHHhccc-CCchhhehhHHHHHH
Confidence 99999999999999 4444 59999999998765432 22345689999999988654 899999999999999
Q ss_pred HHHhCCCCCCCCCh-HHHHHHHHccCccccc----CCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESF-ERDANIVKDRKDLFLV----EHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~-~~~~~~i~~~~~~~~~----~~s~el~dLI~~cL~~DP~~R 753 (753)
||++| .+||.... ......+.......+. .+++++.+||.+||+.||++|
T Consensus 199 ~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 253 (277)
T 3f3z_A 199 VLLCG-YPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQR 253 (277)
T ss_dssp HHHHS-SCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHC-CCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhC
Confidence 99998 66776653 3344444444444433 678999999999999999998
No 81
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=334.71 Aligned_cols=238 Identities=23% Similarity=0.382 Sum_probs=181.6
Q ss_pred eecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCC--CceeeecccccCCceE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQH--PNIVRWYGVESDQDFV 542 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~H--pNIV~L~g~~~~~~~~ 542 (753)
..++.|.+.+.||+|+||.||++...+++.||||++..... +...+|+. ++..++| +||+++++++.+.+..
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~~~iv~~~~~~~~~~~~ 84 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA-YLNKLQQHSDKIIRLYDYEITDQYI 84 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHH-HHHhhhhcCCceEEEeeeEeeCCEE
Confidence 34678999999999999999999888899999999975432 23344554 6677766 9999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++|||++. |+|.+++.. ...+++.++..++.||+.||.||
T Consensus 85 ~lv~e~~~-----------~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~al~~l 124 (343)
T 3dbq_A 85 YMVMECGN-----------IDLNSWLKK-----------------------------KKSIDPWERKSYWKNMLEAVHTI 124 (343)
T ss_dssp EEEECCCS-----------EEHHHHHHH-----------------------------SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCC-----------CCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999443 455555432 24577888999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-----------CCCCch
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-----------GRQTRA 691 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~t~k 691 (753)
|+.+|+||||||+|||++ ++ .+||+|||+++........ ......+||+.|+|||++.+ ..++.+
T Consensus 125 H~~~iiHrDikp~NIll~-~~--~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~ 200 (343)
T 3dbq_A 125 HQHGIVHSDLKPANFLIV-DG--MLKLIDFGIANQMQPDTTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 200 (343)
T ss_dssp HHTTCCCCCCCGGGEEEE-TT--EEEECCCSSSCCC-------------CCCCSSCCHHHHHHCC-----------CCHH
T ss_pred HhCCeecCCCCcceEEEE-CC--cEEEeecccccccCccccc-ccCCCCcCCcCcCCHHHHhhccccccccccccCCCch
Confidence 999999999999999996 33 4999999999876543211 12234569999999999865 678999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHH--ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 692 IDLFSLGCILFFCITGGKHPYGESFERD--ANIVK--DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 692 sDIwSfGvvL~EllTG~~~Pf~~~~~~~--~~~i~--~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||||||++|||++| .+||....... ...+. .....++...++++.+||.+||+.||++|
T Consensus 201 ~DiwslG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~R 265 (343)
T 3dbq_A 201 SDVWSLGCILYYMTYG-KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 265 (343)
T ss_dssp HHHHHHHHHHHHHHHS-SCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTS
T ss_pred hhHHHHHHHHHHHHhC-CCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHC
Confidence 9999999999999998 67886643322 22222 22334556677899999999999999998
No 82
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.5e-37 Score=329.04 Aligned_cols=240 Identities=20% Similarity=0.306 Sum_probs=194.4
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC---------chHHHHHHHHHHHhCCCCceeeecccccC
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---------HDVALKEIQNLIASDQHPNIVRWYGVESD 538 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~ 538 (753)
..+.+.|.+.+.||+|+||.||++... +|+.||||.+.... .+...+|+. +++.++||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~ 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS-ILRQVLHHNVITLHDVYEN 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHH-HHHHCCCTTBCCEEEEEEC
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHH-HHHhCCCCCcceEEEEEec
Confidence 456678999999999999999999765 58999999996532 123445554 7899999999999999999
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++||| |+++|+|.+++.. ...+++..++.++.|++.|
T Consensus 87 ~~~~~lv~e----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~a 127 (321)
T 2a2a_A 87 RTDVVLILE----------LVSGGELFDFLAQ-----------------------------KESLSEEEATSFIKQILDG 127 (321)
T ss_dssp SSEEEEEEC----------CCCSCBHHHHHHT-----------------------------CSCEEHHHHHHHHHHHHHH
T ss_pred CCEEEEEEE----------cCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHH
Confidence 999999999 6667788877743 2346778889999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCC--CeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKS--FCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFS 696 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~--~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwS 696 (753)
|+|||+.+|+||||||+||+++.++. ..+||+|||+++...... ......||+.|+|||++.+..++.++||||
T Consensus 128 L~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 203 (321)
T 2a2a_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203 (321)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHH
T ss_pred HHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccc----cccccCCCCCccCcccccCCCCCCccccHH
Confidence 99999999999999999999977652 159999999998775432 223456899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCh-HHHHHHHHccCccc----ccCCCHHHHHHHHHccccCcCCC
Q 004442 697 LGCILFFCITGGKHPYGESF-ERDANIVKDRKDLF----LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~-~~~~~~i~~~~~~~----~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++|||++| ..||.... ......+....... +..+++++.+||.+||..||++|
T Consensus 204 lG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 264 (321)
T 2a2a_A 204 IGVITYILLSG-ASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKR 264 (321)
T ss_dssp HHHHHHHHHHS-CCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTS
T ss_pred HHHHHHHHHHC-CCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhC
Confidence 99999999999 56775543 33334444333322 35678999999999999999998
No 83
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=330.14 Aligned_cols=240 Identities=25% Similarity=0.347 Sum_probs=181.3
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC--------chHHHHHHHH--HHHhCCCCceeeeccccc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--------HDVALKEIQN--LIASDQHPNIVRWYGVES 537 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~--------~~~~~~Ei~~--ll~~l~HpNIV~L~g~~~ 537 (753)
..+.++|.+.+.||+|+||+||++.. .+|+.||||++.... .....+|+.. .+..++||||++++++|.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 44567899999999999999999976 568999999986322 2344555542 234456999999999987
Q ss_pred CCc-----eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHH
Q 004442 538 DQD-----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612 (753)
Q Consensus 538 ~~~-----~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia 612 (753)
+.. ..++|||+|.+ +|.+++... ....+++.+++.++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~-----------~L~~~~~~~---------------------------~~~~~~~~~~~~i~ 126 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVDQ-----------DLRTYLDKA---------------------------PPPGLPAETIKDLM 126 (308)
T ss_dssp ECCSSSEEEEEEEEECCCC-----------BHHHHHHTC---------------------------CTTCSCHHHHHHHH
T ss_pred ccCCCCceeEEEEehhhhc-----------CHHHHHhhc---------------------------cCCCCCHHHHHHHH
Confidence 654 58999996554 455544321 12348889999999
Q ss_pred HHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchh
Q 004442 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAI 692 (753)
Q Consensus 613 ~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ks 692 (753)
.||+.||+|||+.+|+||||||+|||++.++. +||+|||+++..... .......||+.|+|||++.+..++.++
T Consensus 127 ~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~ 200 (308)
T 3g33_A 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGT--VKLADFGLARIYSYQ----MALTPVVVTLWYRAPEVLLQSTYATPV 200 (308)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCTTTEEECTTSC--EEECSCSCTTTSTTC----CCSGGGGCCCSSCCHHHHHTSCCCSTH
T ss_pred HHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC--EEEeeCccccccCCC----cccCCccccccccCchHHcCCCCCchH
Confidence 99999999999999999999999999977765 999999999866432 222345689999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHccC---------------------------cccccCCCHHHHHHHHH
Q 004442 693 DLFSLGCILFFCITGGKHPYGESFER-DANIVKDRK---------------------------DLFLVEHIPEAVDLFTR 744 (753)
Q Consensus 693 DIwSfGvvL~EllTG~~~Pf~~~~~~-~~~~i~~~~---------------------------~~~~~~~s~el~dLI~~ 744 (753)
|||||||++|||++| .+||...... ....+.... ......+++++.+||.+
T Consensus 201 DiwslG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 279 (308)
T 3g33_A 201 DMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLE 279 (308)
T ss_dssp HHHHHHHHHHHTTTS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHH
Confidence 999999999999998 6677655332 222222110 00123577899999999
Q ss_pred ccccCcCCC
Q 004442 745 LLDPNPDLR 753 (753)
Q Consensus 745 cL~~DP~~R 753 (753)
||+.||++|
T Consensus 280 ~L~~dP~~R 288 (308)
T 3g33_A 280 MLTFNPHKR 288 (308)
T ss_dssp HTCSSTTTS
T ss_pred HhcCCCccC
Confidence 999999998
No 84
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.4e-37 Score=358.10 Aligned_cols=239 Identities=26% Similarity=0.390 Sum_probs=199.1
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC-----Cc-hHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT-----HH-DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~-----~~-~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
...++|.+.+.||+|+||.||++... +|+.||||++.+. .. ....+|+. +++.++|||||++++++.+.+..
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~-iL~~l~hp~Iv~l~~~~~~~~~l 259 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ-ILEKVNSRFVVSLAYAYETKDAL 259 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHH-HHHHcCCCCEeeEEEEEeeCCEE
Confidence 34577999999999999999998765 6999999999642 12 23345554 78999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
|+||| |+++|+|.+++.... ...+++..++.++.||+.||+||
T Consensus 260 ~lVmE----------y~~gg~L~~~l~~~~---------------------------~~~l~e~~~~~i~~qIl~aL~yL 302 (576)
T 2acx_A 260 CLVLT----------LMNGGDLKFHIYHMG---------------------------QAGFPEARAVFYAAEICCGLEDL 302 (576)
T ss_dssp EEEEC----------CCCSCBHHHHHHSSS---------------------------SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE----------cCCCCcHHHHHHhcC---------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 777888888775321 23488899999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
|+.+|+||||||+|||++.++. +||+|||+++...... .....+||+.|+|||++.+..++.++|||||||++|
T Consensus 303 H~~gIvHrDLKPeNILld~~g~--vKL~DFGla~~~~~~~----~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvily 376 (576)
T 2acx_A 303 HRERIVYRDLKPENILLDDHGH--IRISDLGLAVHVPEGQ----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376 (576)
T ss_dssp HHTTEECCCCCGGGEEECTTSC--EEECCCTTCEECCTTC----CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHH
T ss_pred HHCCEeccCCchheEEEeCCCC--eEEEecccceecccCc----cccccCCCccccCHHHHcCCCCCccchHHHHHHHHH
Confidence 9999999999999999977765 9999999998875432 123457999999999999989999999999999999
Q ss_pred HHHhCCCCCCCCC-----hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGES-----FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~-----~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++| .+||... .......+......++..+++++.+||++||.+||++|
T Consensus 377 eLltG-~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R 431 (576)
T 2acx_A 377 EMIAG-QSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431 (576)
T ss_dssp HHHHS-SCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHhC-CCCCcccccchhHHHHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHc
Confidence 99998 6677654 23344555556666778899999999999999999998
No 85
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.5e-37 Score=322.83 Aligned_cols=240 Identities=23% Similarity=0.327 Sum_probs=190.1
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
.+.++|.+.+.||+|+||+||++... +++.||||++.... .....+|+..+....+||||+++++++.+.+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 34577999999999999999999775 69999999997532 2345566664433349999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+++|+|.+++..... ....+++..+++++.||+.||+|||
T Consensus 88 lv~e----------~~~~~~L~~~l~~~~~-------------------------~~~~~~~~~~~~i~~qi~~al~~lH 132 (289)
T 1x8b_A 88 IQNE----------YCNGGSLADAISENYR-------------------------IMSYFKEAELKDLLLQVGRGLRYIH 132 (289)
T ss_dssp EEEE----------CCTTCBHHHHHHHHHH-------------------------HTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------ecCCCcHHHHHHhhcc-------------------------cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 6677888888765321 1246888999999999999999999
Q ss_pred hCCccccCCCCCcEEEecCC-----------------CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC
Q 004442 624 EIGLIHRDLKPQNVLISKDK-----------------SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG 686 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~-----------------~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 686 (753)
+.+|+||||||+||+++.++ ...+||+|||++...... ....||+.|+|||++.+.
T Consensus 133 ~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~gt~~y~aPE~~~~~ 205 (289)
T 1x8b_A 133 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP-------QVEEGDSRFLANEVLQEN 205 (289)
T ss_dssp HTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS-------CCCCCCGGGCCHHHHTTC
T ss_pred hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc-------cccCCCccccChhHhcCC
Confidence 99999999999999997543 346899999999876532 223589999999999876
Q ss_pred -CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 687 -RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 687 -~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.++.++|||||||++|||++|.. |+... ..............+..+++++.+||.+||+.||++|
T Consensus 206 ~~~~~~~Di~slG~il~~l~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 271 (289)
T 1x8b_A 206 YTHLPKADIFALALTVVCAAGAEP-LPRNG-DQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERR 271 (289)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCCC-CCSSS-HHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCchhhHHHHHHHHHHHhcCCC-CCcch-hHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccC
Confidence 56789999999999999999844 44333 2222333344455677889999999999999999998
No 86
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-37 Score=320.31 Aligned_cols=239 Identities=23% Similarity=0.355 Sum_probs=194.8
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEccc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~c 549 (753)
.++|.+.+.||+|+||.||++...+++.||||++.... .+...+|+. +++.++||||+++++++.+++..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e-- 83 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAE-VMMKLSHPKLVQLYGVCLEQAPICLVTE-- 83 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHH-HHHTCCCTTBCCEEEEECSSSSCEEEEC--
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHH-HHHhCCCCCEeeEEEEEccCCCeEEEEe--
Confidence 35788999999999999999988889999999997653 234445554 7899999999999999999999999999
Q ss_pred cCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccc
Q 004442 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (753)
Q Consensus 550 ~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiH 629 (753)
|+++|+|.+++... ...+++..+++++.|++.||+|||+.+|+|
T Consensus 84 --------~~~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 127 (267)
T 3t9t_A 84 --------FMEHGCLSDYLRTQ----------------------------RGLFAAETLLGMCLDVCEGMAYLEEACVIH 127 (267)
T ss_dssp --------CCTTCBHHHHHHHT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred --------CCCCCcHHHHHhhC----------------------------cccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 67778888877532 134778889999999999999999999999
Q ss_pred cCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 004442 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGK 709 (753)
Q Consensus 630 rDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~ 709 (753)
|||||+||+++.++. +||+|||+++..... .........++..|+|||++.+..++.++||||||+++|||++++.
T Consensus 128 ~dl~p~Nili~~~~~--~kl~dfg~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 203 (267)
T 3t9t_A 128 RDLAARNCLVGENQV--IKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203 (267)
T ss_dssp SSCCGGGEEECGGGC--EEECCTTGGGGBCCH--HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCchheEEECCCCC--EEEcccccccccccc--cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCC
Confidence 999999999977654 999999999876432 1122233457889999999998999999999999999999999547
Q ss_pred CCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 710 HPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 710 ~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+||..... .....+... ....+..+++++.++|.+||+.||++|
T Consensus 204 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 249 (267)
T 3t9t_A 204 IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDR 249 (267)
T ss_dssp CTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhC
Confidence 88876543 333333333 344566778999999999999999998
No 87
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=340.07 Aligned_cols=234 Identities=20% Similarity=0.324 Sum_probs=183.9
Q ss_pred EEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc---hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEccccC
Q 004442 476 VFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (753)
Q Consensus 476 ~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~c~~ 551 (753)
...+.||+|+||.||++.. .+|+.||||++..... +...+|+ .+++.++||||++++++|.+.+..++|||
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E---- 166 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI-SVMNQLDHANLIQLYDAFESKNDIVLVME---- 166 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHH-HHHTTCCCTTBCCEEEEEECSSEEEEEEE----
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHH-HHHHhCCCCCCCeEEEEEEECCEEEEEEe----
Confidence 3467899999999999876 4699999999976542 2334454 47899999999999999999999999999
Q ss_pred ChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccccC
Q 004442 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (753)
Q Consensus 552 ~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrD 631 (753)
|+++|+|.+++... ...+++..++.++.||+.||+|||+.+|+|||
T Consensus 167 ------~~~~~~L~~~l~~~----------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D 212 (373)
T 2x4f_A 167 ------YVDGGELFDRIIDE----------------------------SYNLTELDTILFMKQICEGIRHMHQMYILHLD 212 (373)
T ss_dssp ------CCTTCEEHHHHHHT----------------------------GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred ------CCCCCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 66778887777532 12467888899999999999999999999999
Q ss_pred CCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 004442 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP 711 (753)
Q Consensus 632 LKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~~P 711 (753)
|||+|||+..++...+||+|||+++...... .....+||+.|+|||++.+..++.++|||||||++|||++| ..|
T Consensus 213 lkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-~~p 287 (373)
T 2x4f_A 213 LKPENILCVNRDAKQIKIIDFGLARRYKPRE----KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG-LSP 287 (373)
T ss_dssp CCGGGEEEEETTTTEEEECCCSSCEECCTTC----BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHS-SCT
T ss_pred CCHHHEEEecCCCCcEEEEeCCCceecCCcc----ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhC-CCC
Confidence 9999999976555679999999999875432 22344689999999999999999999999999999999998 567
Q ss_pred CCCCh-HHHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 712 YGESF-ERDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 712 f~~~~-~~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|.... ......+...... ....+++++.+||.+||+.||++|
T Consensus 288 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 334 (373)
T 2x4f_A 288 FLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWR 334 (373)
T ss_dssp TCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred CCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhC
Confidence 75543 3333333333322 235678999999999999999998
No 88
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.4e-37 Score=331.87 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=180.7
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCC----cEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCC
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEG----RSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g----~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~ 539 (753)
....++|.+.+.||+|+||.||++..... ..||||++.... .+.+.+|+. +++.++||||+++++++.+.
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAA-CMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHH-HHTTCCCTTBCCCCEEEECC
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHH-HHHHCCCCceehhhceeecc
Confidence 34456789999999999999999976543 289999996532 123344554 77889999999999999877
Q ss_pred ceE------EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHH
Q 004442 540 DFV------YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (753)
Q Consensus 540 ~~~------~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~ 613 (753)
+.. ++||| |+.+|+|.+++...... .....+++.++++++.
T Consensus 98 ~~~~~~~~~~~v~e----------~~~~~~L~~~l~~~~~~-----------------------~~~~~~~~~~~~~i~~ 144 (323)
T 3qup_A 98 RAKGRLPIPMVILP----------FMKHGDLHAFLLASRIG-----------------------ENPFNLPLQTLVRFMV 144 (323)
T ss_dssp -------CEEEEEE----------CCTTCBHHHHHHHHHC--------------------------CCCCCHHHHHHHHH
T ss_pred ccccCCCccEEEEE----------eccCCcHHHHHHhhhcc-----------------------ccccccCHHHHHHHHH
Confidence 665 99999 77788888888654321 1123588999999999
Q ss_pred HHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhh
Q 004442 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAID 693 (753)
Q Consensus 614 qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksD 693 (753)
|++.||+|||+.+|+||||||+|||++.++ .+||+|||+++........ .......+++.|+|||.+.+..++.++|
T Consensus 145 qi~~al~~LH~~~ivH~Dikp~NIli~~~~--~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~D 221 (323)
T 3qup_A 145 DIACGMEYLSSRNFIHRDLAARNCMLAEDM--TVCVADFGLSRKIYSGDYY-RQGCASKLPVKWLALESLADNLYTVHSD 221 (323)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEECTTS--CEEECCCCC------------------CCGGGCCHHHHHHCCCCHHHH
T ss_pred HHHHHHHHHHcCCcccCCCCcceEEEcCCC--CEEEeeccccccccccccc-cccccccCcccccCchhhcCCCCCCccc
Confidence 999999999999999999999999997775 4999999999876543211 1222334688999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH-ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 694 LFSLGCILFFCITGGKHPYGESFE-RDANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 694 IwSfGvvL~EllTG~~~Pf~~~~~-~~~~~i~-~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||||||++|||++++.+||..... .....+. ......+..+++++.+||.+||+.||++|
T Consensus 222 i~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 283 (323)
T 3qup_A 222 VWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQR 283 (323)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred hhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhC
Confidence 999999999999944788876533 3333333 33455677889999999999999999998
No 89
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.6e-37 Score=323.58 Aligned_cols=236 Identities=26% Similarity=0.380 Sum_probs=192.6
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
..++|.+.+.||+|+||.||++... +++.||||++.... ....+.++..+++.++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467899999999999999999665 47899999986432 12334444458899999999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+++|+|.+++.. ...+++..++.++.|++.||+|||+
T Consensus 87 v~e----------~~~~~~l~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~LH~ 127 (279)
T 3fdn_A 87 ILE----------YAPLGTVYRELQK-----------------------------LSKFDEQRTATYITELANALSYCHS 127 (279)
T ss_dssp EEC----------CCTTEEHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEe----------cCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 6677788777643 2357888999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~El 704 (753)
.+|+||||||+||+++.++. +||+|||++...... ......||+.|+|||.+.+..++.++||||||+++|||
T Consensus 128 ~~i~H~dlkp~Nili~~~~~--~~l~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 200 (279)
T 3fdn_A 128 KRVIHRDIKPENLLLGSAGE--LKIADFGWSVHAPSS-----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200 (279)
T ss_dssp TTCEECCCCGGGEEECTTSC--EEECSCCEESCC-------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred CCEecccCChHhEEEcCCCC--EEEEeccccccCCcc-----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHH
Confidence 99999999999999977765 999999998654332 12344689999999999999999999999999999999
Q ss_pred HhCCCCCCCCCh-HHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 ITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lTG~~~Pf~~~~-~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++| .+||.... ......+......++..+++++.+||.+||+.||++|
T Consensus 201 ~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 249 (279)
T 3fdn_A 201 LVG-KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 249 (279)
T ss_dssp HHS-SCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGS
T ss_pred HHC-CCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhC
Confidence 998 66776653 4445555666667778889999999999999999998
No 90
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.5e-37 Score=340.20 Aligned_cols=243 Identities=20% Similarity=0.236 Sum_probs=187.6
Q ss_pred ecceEEEeEEeccc--CceEEEEEEee-CCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 471 IGKLVVFNKEIAKG--SNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 471 i~~~~~i~~~IG~G--~fG~Vyka~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
.+++|++.+.||+| +||+||++... +|+.||||++..... ...+.++..+++.++|||||++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 45679999999999 99999999776 699999999975431 123333445889999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++.... ...+++..+..++.||+.||+|||
T Consensus 103 lv~e----------~~~~~~L~~~l~~~~---------------------------~~~~~~~~~~~~~~qi~~~l~~LH 145 (389)
T 3gni_B 103 VVTS----------FMAYGSAKDLICTHF---------------------------MDGMNELAIAYILQGVLKALDYIH 145 (389)
T ss_dssp EEEE----------CCTTCBHHHHHHHTC---------------------------TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------ccCCCCHHHHHhhhc---------------------------ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 777888888875421 245788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCc----ccccCccCCCCccccccccccC--CCCCchhhHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS----CLTQNATGYGSSGWQAPEQLLQ--GRQTRAIDLFSL 697 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~----~~~~~~~~~GT~~Y~APE~l~~--~~~t~ksDIwSf 697 (753)
+.+|+||||||+|||++.++. +||+|||++........ ........+||+.|+|||++.+ ..++.++|||||
T Consensus 146 ~~~ivHrDlkp~NIll~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 223 (389)
T 3gni_B 146 HMGYVHRSVKASHILISVDGK--VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSV 223 (389)
T ss_dssp HTTEECCCCSGGGEEECTTCC--EEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHH
T ss_pred hCCeecCCCCHHHEEEcCCCC--EEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHH
Confidence 999999999999999977764 99999999876532211 1112233468999999999987 578999999999
Q ss_pred HHHHHHHHhCCCCCCCCChHH-HHHHHHcc----------------------------------------------Cccc
Q 004442 698 GCILFFCITGGKHPYGESFER-DANIVKDR----------------------------------------------KDLF 730 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~~~~-~~~~i~~~----------------------------------------------~~~~ 730 (753)
||++|||++| .+||.+.... ........ ....
T Consensus 224 G~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (389)
T 3gni_B 224 GITACELANG-HVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPY 302 (389)
T ss_dssp HHHHHHHHHS-SCTTTTCCSTTHHHHC-----------------------------------------------------
T ss_pred HHHHHHHHHC-CCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCcc
Confidence 9999999998 6677553221 11110000 1123
Q ss_pred ccCCCHHHHHHHHHccccCcCCC
Q 004442 731 LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 731 ~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+..+++++.+||++||+.||++|
T Consensus 303 ~~~~s~~~~~li~~~L~~dP~~R 325 (389)
T 3gni_B 303 HRTFSPHFHHFVEQCLQRNPDAR 325 (389)
T ss_dssp ---CCHHHHHHHHHHTCSCTTTS
T ss_pred ccccCHHHHHHHHHHhhcCcccC
Confidence 45678899999999999999998
No 91
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=331.47 Aligned_cols=243 Identities=24% Similarity=0.416 Sum_probs=187.4
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCc--e
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQD--F 541 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~--~ 541 (753)
....++|.+.+.||+|+||+||++.... |+.||||++.... .+...+|+. +++.++||||+++++++.+.+ .
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 83 (319)
T 4euu_A 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE-VLKKLNHKNIVKLFAIEEETTTRH 83 (319)
T ss_dssp ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHH-HHHHCCCTTBCCEEEEEECTTTCC
T ss_pred cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHH-HHHhcCCCCcceEEEEeecCCCce
Confidence 3456789999999999999999997754 8999999997532 233445554 789999999999999987654 7
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+.+|+|.+++.... ....+++.+++.++.||+.||+|
T Consensus 84 ~~lv~e----------~~~~~~L~~~l~~~~--------------------------~~~~~~~~~~~~i~~qi~~~L~~ 127 (319)
T 4euu_A 84 KVLIME----------FCPCGSLYTVLEEPS--------------------------NAYGLPESEFLIVLRDVVGGMNH 127 (319)
T ss_dssp EEEEEE----------CCTTCBHHHHHHSGG--------------------------GTTCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEe----------CCCCCCHHHHHHHhc--------------------------cccCCCHHHHHHHHHHHHHHHHH
Confidence 899999 777788888876432 12348889999999999999999
Q ss_pred hhhCCccccCCCCCcEEEe--cCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc--------CCCCCch
Q 004442 622 LHEIGLIHRDLKPQNVLIS--KDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL--------QGRQTRA 691 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~--~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--------~~~~t~k 691 (753)
||+.+|+||||||+|||+. .++...+||+|||+++...... ......||+.|+|||++. +..++.+
T Consensus 128 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~ 203 (319)
T 4euu_A 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGAT 203 (319)
T ss_dssp HHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTT
T ss_pred HHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC----ceeecccCCCccCHHHhhhccccccccCCCCcH
Confidence 9999999999999999982 2333569999999998875432 223456899999999986 5778999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHccCc-------------------------ccccCCCHHHHHH
Q 004442 692 IDLFSLGCILFFCITGGKHPYGES-----FERDANIVKDRKD-------------------------LFLVEHIPEAVDL 741 (753)
Q Consensus 692 sDIwSfGvvL~EllTG~~~Pf~~~-----~~~~~~~i~~~~~-------------------------~~~~~~s~el~dL 741 (753)
+|||||||++|||+|| .+||... .......+....+ .....+++.+.+|
T Consensus 204 ~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 282 (319)
T 4euu_A 204 VDLWSIGVTFYHAATG-SLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPV 282 (319)
T ss_dssp HHHHHHHHHHHHHHHS-SCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHH
Confidence 9999999999999998 6677532 1222222222221 1112234578899
Q ss_pred HHHccccCcCCC
Q 004442 742 FTRLLDPNPDLR 753 (753)
Q Consensus 742 I~~cL~~DP~~R 753 (753)
|++||+.||++|
T Consensus 283 l~~~L~~dP~~R 294 (319)
T 4euu_A 283 LANILEADQEKC 294 (319)
T ss_dssp HHHHSCCCTTTS
T ss_pred HHHhccCChhhh
Confidence 999999999998
No 92
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-37 Score=342.88 Aligned_cols=240 Identities=28% Similarity=0.360 Sum_probs=172.2
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC-----chHHHHHHHHHHHhCC-CCceeeecccccCC--
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQ-HPNIVRWYGVESDQ-- 539 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~-HpNIV~L~g~~~~~-- 539 (753)
+.+.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ....++|+. ++..+. |+||+++++++...
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIM-ILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHH-HHHHTTTCTTBCCEEEEEECTTS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHH-HHHhccCCCCCCeeeeEEecCCC
Confidence 34567899999999999999999965 468999999986432 234456666 556665 99999999998654
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
...|+|||||.++| .+++. ...+++..+..++.||+.||
T Consensus 84 ~~~~lv~e~~~~~L-----------~~~~~------------------------------~~~~~~~~~~~i~~qi~~~L 122 (388)
T 3oz6_A 84 RDVYLVFDYMETDL-----------HAVIR------------------------------ANILEPVHKQYVVYQLIKVI 122 (388)
T ss_dssp SCEEEEEECCSEEH-----------HHHHH------------------------------HTCCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccCcCH-----------HHHHH------------------------------cCCCCHHHHHHHHHHHHHHH
Confidence 47899999665444 44332 13467778899999999999
Q ss_pred HHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCc------------------ccccCccCCCCccccccc
Q 004442 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS------------------CLTQNATGYGSSGWQAPE 681 (753)
Q Consensus 620 ~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~------------------~~~~~~~~~GT~~Y~APE 681 (753)
+|||+.+|+||||||+|||++.++ .+||+|||+++....... ........+||+.|+|||
T Consensus 123 ~~LH~~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 200 (388)
T 3oz6_A 123 KYLHSGGLLHRDMKPSNILLNAEC--HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPE 200 (388)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHH
T ss_pred HHHHhCCEEeCCCCHHHeEEcCCC--CEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHH
Confidence 999999999999999999997765 499999999987643110 111223457999999999
Q ss_pred cccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHccC-c------------------------------
Q 004442 682 QLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRK-D------------------------------ 728 (753)
Q Consensus 682 ~l~~-~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~-~~~~~~i~~~~-~------------------------------ 728 (753)
++.+ ..++.++|||||||++|||++| ++||.+.. ......+.... .
T Consensus 201 ~~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (388)
T 3oz6_A 201 ILLGSTKYTKGIDMWSLGCILGEILCG-KPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQS 279 (388)
T ss_dssp HHTTCCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC----
T ss_pred HhcCCCCCCChhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCC
Confidence 9987 6789999999999999999998 66775543 22222221100 0
Q ss_pred ----------------ccccCCCHHHHHHHHHccccCcCCC
Q 004442 729 ----------------LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 729 ----------------~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
......++++.+||++||..||++|
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 280 NKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp -CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred CHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 0112668899999999999999998
No 93
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.7e-37 Score=324.81 Aligned_cols=244 Identities=17% Similarity=0.220 Sum_probs=192.3
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-hHHHHHHHHHHHhC-CCCceeeecccccCCceEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~LV 545 (753)
..+.++|.+.+.||+|+||.||++.. .+|+.||||++..... ....+|+. .+..+ +|+||+++++++.+....++|
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYR-TYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHH-HHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHH-HHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 45678899999999999999999975 5699999999975443 34555665 55555 899999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+ +|+|.+++... ...+++.++++++.||+.||+|||+.
T Consensus 85 ~e----------~~-~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~ 125 (298)
T 1csn_A 85 ID----------LL-GPSLEDLLDLC----------------------------GRKFSVKTVAMAAKQMLARVQSIHEK 125 (298)
T ss_dssp EE----------CC-CCBHHHHHHHT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EE----------ec-CCCHHHHHHHh----------------------------ccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99 55 56666666432 23578889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCC---CeEEEEeccCceeccCCCccc----ccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKS---FCAKLSDMGISKRLQGDMSCL----TQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~---~~~KLsDFGla~~~~~~~~~~----~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
+|+||||||+||+++.++. ..+||+|||+++......... .......||+.|+|||++.+..++.++||||||
T Consensus 126 ~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 205 (298)
T 1csn_A 126 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALG 205 (298)
T ss_dssp TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHH
Confidence 9999999999999976542 349999999999876532211 123455699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC----hHHHHHHHHcc-----CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGES----FERDANIVKDR-----KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~----~~~~~~~i~~~-----~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||++| .+||... .......+... .......+++++.++|.+||+.||++|
T Consensus 206 ~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 268 (298)
T 1csn_A 206 HVFMYFLRG-SLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDAT 268 (298)
T ss_dssp HHHHHHHHS-SCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHcC-CCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccC
Confidence 999999998 6787653 22222222111 112334688999999999999999998
No 94
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-36 Score=322.24 Aligned_cols=239 Identities=24% Similarity=0.349 Sum_probs=195.3
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
...++|.+.+.||+|+||.||++... +++.||+|.+.... ....+.++..+++.++|+||+++++++.+.+..+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence 34578999999999999999999776 48899999986532 1222333334789999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++.. ...+++.+++.++.|++.||+|||
T Consensus 92 lv~e----------~~~~~~L~~~~~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~lH 132 (294)
T 2rku_A 92 VVLE----------LCRRRSLLELHKR-----------------------------RKALTEPEARYYLRQIVLGCQYLH 132 (294)
T ss_dssp EEEE----------CCTTCBHHHHHHH-----------------------------HCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------cCCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 6666777776532 245788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+|+||||||+||+++.++. +||+|||++........ ......||+.|+|||++.+..++.++||||||+++||
T Consensus 133 ~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 207 (294)
T 2rku_A 133 RNRVIHRDLKLGNLFLNEDLE--VKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 207 (294)
T ss_dssp HTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCSTTC---CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHH
T ss_pred HCCccccCCChHhEEEcCCCC--EEEEeccCceecccCcc---ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHH
Confidence 999999999999999977654 99999999987653221 2234568999999999999889999999999999999
Q ss_pred HHhCCCCCCCCCh-HHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~~-~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++| ..||.... ......+.......+..+++++.++|++||+.||++|
T Consensus 208 l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 257 (294)
T 2rku_A 208 LLVG-KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 257 (294)
T ss_dssp HHHS-SCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHhC-CCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHHHHcccChhhC
Confidence 9998 66776653 3344445555666777889999999999999999998
No 95
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-37 Score=337.88 Aligned_cols=271 Identities=21% Similarity=0.282 Sum_probs=193.9
Q ss_pred ceecceEEEeEEecccCceEEEEEEe------eCCcEEEEEEeecCCc----hHHHHHHHHHHHhC-CCCceeeeccccc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVES 537 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~L~g~~~ 537 (753)
....++|.+.+.||+|+||.||++.. .+++.||||++..... +.+.+|+. ++..+ +||||++++++|.
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK-ILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEC
T ss_pred cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHH-HHHhhcCCcceeeeeeeee
Confidence 34567899999999999999999963 3468999999976442 23455665 55555 8999999999988
Q ss_pred CCc-eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhh------------------hhc-------------
Q 004442 538 DQD-FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR------------------IRL------------- 585 (753)
Q Consensus 538 ~~~-~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~------------------~~~------------- 585 (753)
+.+ ..++||| |+.+|+|.++++............. .++
T Consensus 97 ~~~~~~~iv~e----------~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (359)
T 3vhe_A 97 KPGGPLMVIVE----------FCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG 166 (359)
T ss_dssp STTSCCEEEEE----------CCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred cCCCceEEEEE----------ecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence 754 4899999 6667777777765432110000000 000
Q ss_pred ------ccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceecc
Q 004442 586 ------LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (753)
Q Consensus 586 ------~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~ 659 (753)
.................+++..+++++.||+.||+|||+.+|+||||||+|||++.++ .+||+|||+++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~--~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN--VVKICDFGLARDIY 244 (359)
T ss_dssp -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTT
T ss_pred cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC--cEEEEeccceeeec
Confidence 0000000001111233489999999999999999999999999999999999997665 49999999998764
Q ss_pred CCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHH-HccCcccccCCCH
Q 004442 660 GDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIV-KDRKDLFLVEHIP 736 (753)
Q Consensus 660 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~--~~~~~~i-~~~~~~~~~~~s~ 736 (753)
..... .......||+.|+|||++.+..++.++|||||||++|||+|++.+||.... ......+ .......+..+++
T Consensus 245 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (359)
T 3vhe_A 245 KDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP 323 (359)
T ss_dssp SCTTC-EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCH
T ss_pred ccccc-hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCH
Confidence 43221 223344578999999999999999999999999999999993377886642 2222233 3334556677899
Q ss_pred HHHHHHHHccccCcCCC
Q 004442 737 EAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 737 el~dLI~~cL~~DP~~R 753 (753)
++.++|.+||+.||++|
T Consensus 324 ~l~~li~~~l~~dP~~R 340 (359)
T 3vhe_A 324 EMYQTMLDCWHGEPSQR 340 (359)
T ss_dssp HHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHccCChhhC
Confidence 99999999999999998
No 96
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.5e-37 Score=329.53 Aligned_cols=240 Identities=26% Similarity=0.369 Sum_probs=173.5
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
.+|++.+.||+|+||.||+|... +|+.||||++.... .....+|+. +++.++||||+++++++.+++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREIS-LMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHH-HHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHH-HHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 46888899999999999999765 58999999996432 234555665 7899999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
+|.+ +|.+++...... .....+++..+..++.||+.||+|||+.+|
T Consensus 84 ~~~~-----------~L~~~l~~~~~~-----------------------~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 129 (317)
T 2pmi_A 84 FMDN-----------DLKKYMDSRTVG-----------------------NTPRGLELNLVKYFQWQLLQGLAFCHENKI 129 (317)
T ss_dssp CCCC-----------BHHHHHHHHHSS-----------------------SCCCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ecCC-----------CHHHHHHhcccc-----------------------ccccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6654 444444332210 112457888999999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC-CCCchhhHHHHHHHHHHHHh
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDIwSfGvvL~EllT 706 (753)
+||||||+|||++.++. +||+|||+++...... .......||+.|+|||++.+. .++.++|||||||++|||+|
T Consensus 130 vH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~ 204 (317)
T 2pmi_A 130 LHRDLKPQNLLINKRGQ--LKLGDFGLARAFGIPV---NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT 204 (317)
T ss_dssp ECCCCCGGGEEECTTCC--EEECCCSSCEETTSCC---CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred eeCCCChHHeEEcCCCC--EEECcCccceecCCCc---ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 99999999999977765 9999999998765322 122344689999999999764 58999999999999999999
Q ss_pred CCCCCCCCChHH-HHHHHHcc----------------------------------CcccccCCCHHHHHHHHHccccCcC
Q 004442 707 GGKHPYGESFER-DANIVKDR----------------------------------KDLFLVEHIPEAVDLFTRLLDPNPD 751 (753)
Q Consensus 707 G~~~Pf~~~~~~-~~~~i~~~----------------------------------~~~~~~~~s~el~dLI~~cL~~DP~ 751 (753)
| .+||...... ....+... .......+++++.+||.+||+.||+
T Consensus 205 g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 283 (317)
T 2pmi_A 205 G-KPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPD 283 (317)
T ss_dssp S-SCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGG
T ss_pred C-CCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcc
Confidence 9 6677665332 22222110 0011235678999999999999999
Q ss_pred CC
Q 004442 752 LR 753 (753)
Q Consensus 752 ~R 753 (753)
+|
T Consensus 284 ~R 285 (317)
T 2pmi_A 284 MR 285 (317)
T ss_dssp GS
T ss_pred cC
Confidence 98
No 97
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=9.4e-37 Score=330.24 Aligned_cols=237 Identities=25% Similarity=0.364 Sum_probs=195.1
Q ss_pred ecceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCC-----c-hHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH-----H-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~-----~-~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
..++|.+.+.||+|+||.||++...+ ++.||+|++.... . +...+|+ .+++.++|+||+++++++.+.+..+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHH-HHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEecCCeEE
Confidence 35679999999999999999997654 8899999986542 1 2233444 4789999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++.. ...+++.+++.++.||+.||+|||
T Consensus 118 lv~e----------~~~~~~L~~~~~~-----------------------------~~~l~~~~~~~i~~qi~~aL~~LH 158 (335)
T 2owb_A 118 VVLE----------LCRRRSLLELHKR-----------------------------RKALTEPEARYYLRQIVLGCQYLH 158 (335)
T ss_dssp EEEC----------CCTTCBHHHHHHH-----------------------------HCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------cCCCCCHHHHHhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 6666777776532 245788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+|+||||||+||+++.++. +||+|||+++....... ......||+.|+|||++.+..++.++|||||||++||
T Consensus 159 ~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~ 233 (335)
T 2owb_A 159 RNRVIHRDLKLGNLFLNEDLE--VKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 233 (335)
T ss_dssp HTTEECSCCCGGGEEECTTCC--EEECCCTTCEECCSTTC---CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHH
T ss_pred HCCCEecCCCchhEEEcCCCC--EEEeeccCceecccCcc---cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 999999999999999977754 99999999987653221 2234568999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCh-HHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~~-~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++| ..||.... ......+.......+..+++++.+||++||+.||++|
T Consensus 234 l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 283 (335)
T 2owb_A 234 LLVG-KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 283 (335)
T ss_dssp HHHS-SCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHC-cCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHccCChhHC
Confidence 9998 66776653 3444445555666777889999999999999999998
No 98
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.7e-37 Score=334.99 Aligned_cols=243 Identities=19% Similarity=0.242 Sum_probs=188.4
Q ss_pred eecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-hHHHHHHHHHHHhC-CCCceeeecccccCCceEEEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
.++++|.+.+.||+|+||.||++.. .+|+.||||.+..... ....+|+. +++.+ +|+||+++++++.+.+..++||
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~-~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYR-FYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHH-HHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHH-HHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 4567899999999999999999975 5699999999975443 34556665 66777 9999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+ +|+|.+++... ...+++..++.|+.|++.||+|||+.+
T Consensus 85 e----------~~-~~~L~~~~~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~LH~~~ 125 (330)
T 2izr_A 85 E----------LL-GPSLEDLFDLC----------------------------DRTFSLKTVLMIAIQLISRMEYVHSKN 125 (330)
T ss_dssp E----------CC-CCBHHHHHHHT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred E----------eC-CCCHHHHHHHc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 55 56666665421 245788999999999999999999999
Q ss_pred ccccCCCCCcEEEecCCC---CeEEEEeccCceeccCCCccc----ccCccCCCCccccccccccCCCCCchhhHHHHHH
Q 004442 627 LIHRDLKPQNVLISKDKS---FCAKLSDMGISKRLQGDMSCL----TQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 699 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~---~~~KLsDFGla~~~~~~~~~~----~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGv 699 (753)
|+||||||+|||++.++. ..+||+|||+++......... .......||+.|+|||++.+..++.++|||||||
T Consensus 126 iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 205 (330)
T 2izr_A 126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGH 205 (330)
T ss_dssp EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHH
Confidence 999999999999976543 239999999999765432211 1224567999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCh----HHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGESF----ERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~----~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||++| .+||.... ......+.......+ ....+++.++|.+||+.||++|
T Consensus 206 il~ell~g-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~R 266 (330)
T 2izr_A 206 MFMYFLRG-SLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEK 266 (330)
T ss_dssp HHHHHHHS-SCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHhcC-CCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCC
Confidence 99999998 67886532 122222222222211 1223499999999999999998
No 99
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4e-37 Score=350.00 Aligned_cols=238 Identities=25% Similarity=0.374 Sum_probs=198.5
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCce
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~ 541 (753)
....+.|.+.+.||+|+||.||+|... +|+.||||++.... .....+|+. +++.++||||+++++++.+.+.
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~HpnIv~l~~~~~~~~~ 90 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQ-NLKLFRHPHIIKLYQVISTPSD 90 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCE
Confidence 444567999999999999999999765 69999999996432 123445554 7799999999999999999999
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+++|+|.+++.. ...+++..+..++.||+.||+|
T Consensus 91 ~~lv~E----------~~~gg~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi~~aL~~ 131 (476)
T 2y94_A 91 IFMVME----------YVSGGELFDYICK-----------------------------NGRLDEKESRRLFQQILSGVDY 131 (476)
T ss_dssp EEEEEE----------CCSSEEHHHHTTS-----------------------------SSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEe----------CCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 999999 6667888877642 2357888999999999999999
Q ss_pred hhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-CchhhHHHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCI 700 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDIwSfGvv 700 (753)
||+.+|+||||||+|||++.++. +||+|||+++..... ......+||+.|+|||++.+..+ +.++|||||||+
T Consensus 132 LH~~givHrDLkp~NIll~~~~~--vkL~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi 205 (476)
T 2y94_A 132 CHRHMVVHRDLKPENVLLDAHMN--AKIADFGLSNMMSDG----EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVI 205 (476)
T ss_dssp HHTTTEECSCCSGGGEEECTTCC--EEECCCSSCEECCTT----CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHH
T ss_pred HHHCCCCcccccHHHEEEecCCC--eEEEeccchhhcccc----ccccccCCCcCeEChhhccCCCCCCCcceehhhHHH
Confidence 99999999999999999977765 999999999876542 12345579999999999988776 789999999999
Q ss_pred HHHHHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++| .+||.+. .......+.......+..+++++.+||++||+.||++|
T Consensus 206 l~elltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~R 258 (476)
T 2y94_A 206 LYALLCG-TLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKR 258 (476)
T ss_dssp HHHHHHS-SCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHhhC-CCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHHHHHcCCCchhC
Confidence 9999998 6677654 44555666666667778889999999999999999998
No 100
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-37 Score=333.15 Aligned_cols=267 Identities=21% Similarity=0.269 Sum_probs=195.2
Q ss_pred ceecceEEEeEEecccCceEEEEEEee------CCcEEEEEEeecCCch---HHHHHHHHHHHhCCCCceeeecccccCC
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESDQ 539 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~------~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~L~g~~~~~ 539 (753)
....++|.+.+.||+|+||.||++... +++.||||+++..... ..+..+..+++.++||||++++++|.+.
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 344577899999999999999999775 3489999999765432 2233334478999999999999999999
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
+..++||| |+.+|+|.+++............. ... .............+++.++++++.||+.||
T Consensus 123 ~~~~lv~e----------~~~~~~L~~~l~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l 187 (343)
T 1luf_A 123 KPMCLLFE----------YMAYGDLNEFLRSMSPHTVCSLSH----SDL-STRARVSSPGPPPLSCAEQLCIARQVAAGM 187 (343)
T ss_dssp SSCEEEEE----------CCTTCBHHHHHHHTCC---------------------------CCCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEe----------cCCCCcHHHHHHHhCccccccccc----ccc-cccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999 666778888776532211000000 000 000000001135789999999999999999
Q ss_pred HHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHH
Q 004442 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 699 (753)
Q Consensus 620 ~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGv 699 (753)
.|||+.+|+||||||+|||++.++ .+||+|||+++...... .........+|+.|+|||++.+..++.++|||||||
T Consensus 188 ~~LH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~ 264 (343)
T 1luf_A 188 AYLSERKFVHRDLATRNCLVGENM--VVKIADFGLSRNIYSAD-YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGV 264 (343)
T ss_dssp HHHHHTTCCCSCCSGGGEEECGGG--CEEECCCSCHHHHTGGG-CBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred HHHHhCCeecCCCCcceEEECCCC--eEEEeecCCCcccccCc-cccccCCCcccceecChhhhccCCcCcccccHHHHH
Confidence 999999999999999999997765 49999999998764321 111223445789999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||+|++..||.+... .....+... ....+..+++++.++|++||+.||++|
T Consensus 265 il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 320 (343)
T 1luf_A 265 VLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADR 320 (343)
T ss_dssp HHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccC
Confidence 999999933667765533 333333333 334667889999999999999999998
No 101
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.6e-37 Score=323.44 Aligned_cols=241 Identities=22% Similarity=0.320 Sum_probs=181.0
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeC----CcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~----g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
....++|.+.+.||+|+||.||+|.... +..||||++...... ...+|+ .+++.++||||+++++++. ++
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~-~~ 88 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA-LTMRQFDHPHIVKLIGVIT-EN 88 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHH-HHHHTCCCTTBCCEEEEEC-SS
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHH-HHHHhCCCCccceEEEEEc-cC
Confidence 3445789999999999999999987643 567999998754322 233444 4788999999999999985 45
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++||| |+.+|+|.+++... ...+++..++.++.|++.||.
T Consensus 89 ~~~lv~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~ 130 (281)
T 1mp8_A 89 PVWIIME----------LCTLGELRSFLQVR----------------------------KYSLDLASLILYAYQLSTALA 130 (281)
T ss_dssp SCEEEEE----------CCTTEEHHHHHHHT----------------------------TTTSCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEe----------cCCCCCHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHH
Confidence 7899999 66677888877532 235788899999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
|||+.+|+||||||+|||++.++. +||+|||+++....... .......+|+.|+|||++.+..++.++|||||||+
T Consensus 131 ~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 206 (281)
T 1mp8_A 131 YLESKRFVHRDIAARNVLVSSNDC--VKLGDFGLSRYMEDSTY--YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 206 (281)
T ss_dssp HHHHTTCCCSCCSGGGEEEEETTE--EEECC---------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHH
T ss_pred HHHhCCeecccccHHHEEECCCCC--EEECccccccccCcccc--cccccCCCcccccChhhcccCCCCCccCchHHHHH
Confidence 999999999999999999987764 99999999987654321 12223346889999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCChH-HHHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~-~~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++++.+||..... .....+.. .....+..+++++.++|.+||+.||++|
T Consensus 207 l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 261 (281)
T 1mp8_A 207 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 261 (281)
T ss_dssp HHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 99999844778876533 33333333 3445677889999999999999999998
No 102
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=9.3e-37 Score=333.08 Aligned_cols=234 Identities=24% Similarity=0.346 Sum_probs=184.9
Q ss_pred eecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc------hHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
...+.|...+.||+|+||+||+|.. .+|+.||||++..... +...+|+. +++.++||||++++++|.+++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~ 129 (348)
T 1u5q_A 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR-FLQKLRHPNTIQYRGCYLREHTA 129 (348)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEE
T ss_pred chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEECCeE
Confidence 3446689999999999999999975 5699999999965321 12344554 78999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++|||||.+++ .+++.. ....+++..+..++.|+++||+||
T Consensus 130 ~lv~e~~~g~l-----------~~~l~~----------------------------~~~~l~~~~~~~i~~qi~~aL~~L 170 (348)
T 1u5q_A 130 WLVMEYCLGSA-----------SDLLEV----------------------------HKKPLQEVEIAAVTHGALQGLAYL 170 (348)
T ss_dssp EEEEECCSEEH-----------HHHHHH----------------------------HTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCH-----------HHHHHH----------------------------hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999665444 443321 124578889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc---CCCCCchhhHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL---QGRQTRAIDLFSLGC 699 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDIwSfGv 699 (753)
|+.+|+||||||+|||++.++ .+||+|||+++..... ....||+.|+|||++. ...++.++|||||||
T Consensus 171 H~~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~ 241 (348)
T 1u5q_A 171 HSHNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 241 (348)
T ss_dssp HHTTCBCCCCSGGGEEEETTT--EEEECCCTTCBSSSSB-------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHH
T ss_pred HhCCeeeCCCCHHHEEECCCC--CEEEeeccCceecCCC-------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHH
Confidence 999999999999999998775 5999999999865431 2346899999999985 567899999999999
Q ss_pred HHHHHHhCCCCCCCCC-hHHHHHHHHc-cCc-ccccCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGES-FERDANIVKD-RKD-LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~-~~~~~~~i~~-~~~-~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||++| .+||... .......+.. ... .....+++++.+||.+||+.||++|
T Consensus 242 il~ell~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 297 (348)
T 1u5q_A 242 TCIELAER-KPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 297 (348)
T ss_dssp HHHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHhC-CCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhC
Confidence 99999999 5566544 3333322322 222 2345678999999999999999998
No 103
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.9e-37 Score=347.70 Aligned_cols=241 Identities=24% Similarity=0.363 Sum_probs=190.8
Q ss_pred eecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
...+.|.+.+.||+|+||.||+|...++..||||+++... .+.+.+|+. +++.++||||+++++++.+ +..++|||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ-VMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHH-HHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 3456789999999999999999988888899999997543 234445554 8899999999999999876 67899999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+.+|+|.++|.... ...+++.++++++.||+.||+|||+++|
T Consensus 259 ----------~~~~gsL~~~l~~~~---------------------------~~~~~~~~~~~i~~qi~~~l~~LH~~~i 301 (452)
T 1fmk_A 259 ----------YMSKGSLLDFLKGET---------------------------GKYLRLPQLVDMAAQIASGMAYVERMNY 301 (452)
T ss_dssp ----------CCTTCBHHHHHSHHH---------------------------HTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ----------hhcCCCHHHHHHhcC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 778889999886432 2357888999999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG 707 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG 707 (753)
+||||||+|||++.++ .+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||+|+
T Consensus 302 vHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~ 377 (452)
T 1fmk_A 302 VHRDLRAANILVGENL--VCKVADFGLARLIEDNEY--TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 377 (452)
T ss_dssp CCSCCSGGGEEECGGG--CEEECCCCTTC----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCChhhEEECCCC--CEEECCCccceecCCCce--ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhC
Confidence 9999999999997665 499999999987653211 122233468899999999999999999999999999999994
Q ss_pred CCCCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 708 GKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 708 ~~~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+.+||.+... .....+... ..+.+..+++++.+||.+||+.||++|
T Consensus 378 g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 425 (452)
T 1fmk_A 378 GRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 425 (452)
T ss_dssp TCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 4788876543 333333333 345567889999999999999999998
No 104
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-36 Score=321.72 Aligned_cols=242 Identities=23% Similarity=0.428 Sum_probs=188.1
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC---c-hHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---H-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---~-~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
.+.+.|.+.+.||+|+||.||++... +++.||||++.... . +...+|+. +++.++||||+++++++.+.+..++
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIE-VLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHH-HHHhCCCchHHhHHHheecCCeEEE
Confidence 45578999999999999999998764 58999999996543 1 33445554 7899999999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++.... .....+++..+++++.|++.||+|||+
T Consensus 98 v~e----------~~~~~~L~~~l~~~~-------------------------~~~~~~~~~~~~~i~~qi~~~L~~LH~ 142 (285)
T 3is5_A 98 VME----------TCEGGELLERIVSAQ-------------------------ARGKALSEGYVAELMKQMMNALAYFHS 142 (285)
T ss_dssp EEC----------CCSCCBHHHHHHHHH-------------------------HHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE----------eCCCCcHHHHHHhhh-------------------------hcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 667788888775432 123568889999999999999999999
Q ss_pred CCccccCCCCCcEEEecC-CCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d-~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
.+|+||||||+||+++.+ ....+||+|||+++...... ......||+.|+|||++. ..++.++|||||||++||
T Consensus 143 ~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ 217 (285)
T 3is5_A 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYF 217 (285)
T ss_dssp TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHH
T ss_pred CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHH
Confidence 999999999999999542 23459999999998765321 223456899999999875 568999999999999999
Q ss_pred HHhCCCCCCCCChHH-HHHHHHccCccc---ccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGESFER-DANIVKDRKDLF---LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~~~~-~~~~i~~~~~~~---~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++| ..||...... ............ ...+++++.+||.+||+.||++|
T Consensus 218 ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 270 (285)
T 3is5_A 218 LLTG-CLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERR 270 (285)
T ss_dssp HHHS-SCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTS
T ss_pred HHhC-CCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhC
Confidence 9998 6677665433 333333332222 23468999999999999999998
No 105
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.9e-37 Score=327.13 Aligned_cols=266 Identities=26% Similarity=0.336 Sum_probs=197.7
Q ss_pred ceecceEEEeEEecccCceEEEEEEe------eCCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccC
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESD 538 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~------~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~ 538 (753)
+...++|.+.+.||+|+||.||++.. .+++.||||++...... ...+|+ .+++.++||||+++++++.+
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF-NVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEECS
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHH-HHHhhCCCCceeeEEEEEec
Confidence 34467899999999999999999975 34589999999764432 233444 47789999999999999999
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++||| |+.+|+|.+++............ .................+++.++++++.||+.|
T Consensus 98 ~~~~~lv~e----------~~~~~~L~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 162 (314)
T 2ivs_A 98 DGPLLLIVE----------YAKYGSLRGFLRESRKVGPGYLG-----SGGSRNSSSLDHPDERALTMGDLISFAWQISQG 162 (314)
T ss_dssp SSSCEEEEE----------CCTTCBHHHHHHHTTTSTTEEC---------------------CEECHHHHHHHHHHHHHH
T ss_pred CCceEEEEe----------ecCCCCHHHHHHHHhhccCCccc-----ccccccccccccccccCcCHHHHHHHHHHHHHH
Confidence 999999999 66678888887654321100000 000000001111223458899999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
|+|||+.+|+||||||+||+++.++ .+||+|||+++........ .......+|+.|+|||++.+..++.++||||||
T Consensus 163 l~~lH~~~ivH~dikp~NIli~~~~--~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 239 (314)
T 2ivs_A 163 MQYLAEMKLVHRDLAARNILVAEGR--KMKISDFGLSRDVYEEDSY-VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239 (314)
T ss_dssp HHHHHHTTEECCCCSGGGEEEETTT--EEEECCCTTCEECTTTSCE-ECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHH
T ss_pred HHHHHHCCCcccccchheEEEcCCC--CEEEccccccccccccccc-eeccCCCCcccccChhhhcCCCcCchhhHHHHH
Confidence 9999999999999999999998775 4999999999877543221 223344578999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCCCCh-HHHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~-~~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||+|++.+||.... ......+... ....+..+++++.++|.+||+.||++|
T Consensus 240 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 296 (314)
T 2ivs_A 240 VLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296 (314)
T ss_dssp HHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhC
Confidence 999999993377886653 3344444433 345667789999999999999999998
No 106
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.1e-37 Score=325.73 Aligned_cols=260 Identities=22% Similarity=0.298 Sum_probs=195.3
Q ss_pred ceecceEEEeEEecccCceEEEEEEe------eCCcEEEEEEeecCCc----hHHHHHHHHHHHhC-CCCceeeeccccc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVES 537 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~L~g~~~ 537 (753)
+...++|.+.+.||+|+||.||++.. .+++.||||++..... +...+|+. +++.+ +||||+++++++.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK-VLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEC
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHH-HHhhcccCCCeeeEEEEEe
Confidence 34457899999999999999999974 3478999999976542 23345554 66777 9999999999999
Q ss_pred CCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 538 ~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
+.+..++||| |+++|+|.+++........+.. ............+++.++++++.|++.
T Consensus 98 ~~~~~~lv~e----------~~~~~~L~~~l~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~qi~~ 156 (313)
T 1t46_A 98 IGGPTLVITE----------YCCYGDLLNFLRRKRDSFICSK-----------TSPAIMEDDELALDLEDLLSFSYQVAK 156 (313)
T ss_dssp SSSSCEEEEE----------CCTTEEHHHHHHHTTTTC-------------------------CCCCHHHHHHHHHHHHH
T ss_pred cCCCcEEEEe----------cCCCCCHHHHHHhccccccccc-----------ccccccccccccCCHHHHHHHHHHHHH
Confidence 9999999999 6667778777765432111000 000000112346899999999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHH
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSL 697 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSf 697 (753)
||+|||+.+|+||||||+||+++.++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||
T Consensus 157 ~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 233 (313)
T 1t46_A 157 GMAFLASKNCIHRDLAARNILLTHGR--ITKICDFGLARDIKNDSNY-VVKGNARLPVKWMAPESIFNCVYTFESDVWSY 233 (313)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEEETTT--EEEECCCGGGSCTTSCTTS-EECSSSEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred HHHHHHHCCeecCCCccceEEEcCCC--CEEEccccccccccccccc-eeccCCCCcceeeChHHhcCCCCChHHHHHHH
Confidence 99999999999999999999997775 4999999999877543221 12233457889999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCChH--HHHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 698 GCILFFCITGGKHPYGESFE--RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~~~--~~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++|||+|++.+||..... .....+.. .....+..+++++.++|.+||+.||++|
T Consensus 234 G~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 292 (313)
T 1t46_A 234 GIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 292 (313)
T ss_dssp HHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhC
Confidence 99999999944778866432 22222222 3334466788999999999999999998
No 107
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.5e-37 Score=345.75 Aligned_cols=195 Identities=25% Similarity=0.393 Sum_probs=144.0
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccC-----
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD----- 538 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~----- 538 (753)
.+.++|.+.+.||+|+||+||+|... +|+.||||++..... +...+|+. +++.++|+|||++++++..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIA-ILNRLNHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHH-HHHHCCCTTBCCEEEECCCSCTTT
T ss_pred ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHH-HHHhCCCCCCCceEEEEecCCccc
Confidence 44578999999999999999999654 689999999965321 23445665 7899999999999999844
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..|+|||+|+++|. +++. ....+++..+..++.||+.|
T Consensus 129 ~~~~~lv~e~~~~~L~-----------~~~~-----------------------------~~~~l~~~~~~~~~~qi~~a 168 (458)
T 3rp9_A 129 FDELYVVLEIADSDFK-----------KLFR-----------------------------TPVYLTELHIKTLLYNLLVG 168 (458)
T ss_dssp CCCEEEEECCCSEEHH-----------HHHH-----------------------------SSCCCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEeccccchh-----------hhcc-----------------------------cCCCCCHHHHHHHHHHHHHH
Confidence 3579999996655444 4332 12457888999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcc------------------------cccCccCCCC
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC------------------------LTQNATGYGS 674 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~------------------------~~~~~~~~GT 674 (753)
|+|||+.+|+||||||+||||+.++ .+||+|||+++........ .......+||
T Consensus 169 L~~LH~~~iiHrDlKp~NILl~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 246 (458)
T 3rp9_A 169 VKYVHSAGILHRDLKPANCLVNQDC--SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVT 246 (458)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTTC--CEEECCCTTCBCTTSCTTCCCCCC---------------------------CC
T ss_pred HHHHHhCCcCCCCCChhhEEECCCC--CEeecccccchhccCccccccccccCccccccccccccccccccccccCCccc
Confidence 9999999999999999999997765 4999999999876532111 0123345789
Q ss_pred ccccccccc-cCCCCCchhhHHHHHHHHHHHHhC
Q 004442 675 SGWQAPEQL-LQGRQTRAIDLFSLGCILFFCITG 707 (753)
Q Consensus 675 ~~Y~APE~l-~~~~~t~ksDIwSfGvvL~EllTG 707 (753)
+.|+|||++ .+..++.++|||||||++|||+||
T Consensus 247 ~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 247 RWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 999999986 456699999999999999999994
No 108
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.1e-37 Score=352.61 Aligned_cols=241 Identities=23% Similarity=0.321 Sum_probs=196.7
Q ss_pred ecceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
....|.+.+.||+|+||.||+|.... +..||||+++... .+.+.+|+. +++.++||||++++++|.+.+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHH-HHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 34668899999999999999997765 8999999997543 234445554 8899999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+.+|+|.++|+... ...+++..++.|+.||+.||+|||+++|
T Consensus 297 ----------~~~~g~L~~~l~~~~---------------------------~~~~~~~~~~~i~~qi~~~L~~LH~~~i 339 (495)
T 1opk_A 297 ----------FMTYGNLLDYLRECN---------------------------RQEVSAVVLLYMATQISSAMEYLEKKNF 339 (495)
T ss_dssp ----------CCTTCBHHHHHHHSC---------------------------TTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------ccCCCCHHHHHHhcC---------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 777889988886421 2357788899999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG 707 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG 707 (753)
+||||||+|||++.++ .+||+|||+++...... ........++..|+|||++.+..++.++|||||||++|||+|+
T Consensus 340 vHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~ 415 (495)
T 1opk_A 340 IHRNLAARNCLVGENH--LVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415 (495)
T ss_dssp ECSCCSGGGEEECGGG--CEEECCTTCEECCTTCC--EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCChhhEEECCCC--cEEEeecccceeccCCc--eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhC
Confidence 9999999999997665 49999999999775432 1222334467899999999999999999999999999999995
Q ss_pred CCCCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 708 GKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 708 ~~~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+..||..... .....+... ....+..+++++.+||.+||+.||++|
T Consensus 416 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 463 (495)
T 1opk_A 416 GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDR 463 (495)
T ss_dssp SCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHC
Confidence 4788876543 333333333 344567789999999999999999998
No 109
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-37 Score=336.68 Aligned_cols=237 Identities=25% Similarity=0.366 Sum_probs=190.9
Q ss_pred cceEEEeEEecccCceEEEEEEe----eCCcEEEEEEeecC-------CchHHHHHHHHHHHhC-CCCceeeecccccCC
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKT-------HHDVALKEIQNLIASD-QHPNIVRWYGVESDQ 539 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~----~~g~~VAVK~l~~~-------~~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~ 539 (753)
.++|.+.+.||+|+||.||++.. .+|+.||||+++.. ..+...+|+. ++..+ +|+||+++++++.+.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ-VLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHH-HHHHHHTCTTBCCEEEEEEET
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHH-HHHHccCCCceeEEEEEEeeC
Confidence 36799999999999999999976 36899999998642 1233445665 55666 799999999999999
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
+..++||| |+.+|+|.+++... ..+++..+..++.||+.||
T Consensus 132 ~~~~lv~e----------~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~aL 172 (355)
T 1vzo_A 132 TKLHLILD----------YINGGELFTHLSQR-----------------------------ERFTEHEVQIYVGEIVLAL 172 (355)
T ss_dssp TEEEEEEC----------CCCSCBHHHHHHHH-----------------------------SCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEee----------cCCCCCHHHHHHHc-----------------------------CCCCHHHHHHHHHHHHHHH
Confidence 99999999 77778888887532 3577888999999999999
Q ss_pred HHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC--CCCchhhHHHH
Q 004442 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG--RQTRAIDLFSL 697 (753)
Q Consensus 620 ~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~t~ksDIwSf 697 (753)
.|||+.+|+||||||+|||++.++. +||+|||+++...... .......+||+.|+|||++.+. .++.++|||||
T Consensus 173 ~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dvwsl 248 (355)
T 1vzo_A 173 EHLHKLGIIYRDIKLENILLDSNGH--VVLTDFGLSKEFVADE--TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSL 248 (355)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTSC--EEESCSSEEEECCGGG--GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHH
T ss_pred HHHHHCCcccCCCCHHHEEECCCCc--EEEeeCCCCeecccCC--CCcccCcccCcCccChhhhcCCCCCCCchhhHHHH
Confidence 9999999999999999999977654 9999999998764321 1222345699999999999863 47899999999
Q ss_pred HHHHHHHHhCCCCCCCCC-----hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 698 GCILFFCITGGKHPYGES-----FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~-----~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++|||+|| ..||... .......+.......+..+++++.+||.+||.+||++|
T Consensus 249 G~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 308 (355)
T 1vzo_A 249 GVLMYELLTG-ASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308 (355)
T ss_dssp HHHHHHHHHS-SCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHC-CCCCccCCccchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHh
Confidence 9999999998 6677532 22333444455667788899999999999999999998
No 110
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.6e-37 Score=326.18 Aligned_cols=241 Identities=24% Similarity=0.367 Sum_probs=184.2
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHh--CCCCceeeecccccC----CceE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIAS--DQHPNIVRWYGVESD----QDFV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~--l~HpNIV~L~g~~~~----~~~~ 542 (753)
+.+.++|.+.+.||+|+||+||+|.. +|+.||||++.........+|.+ ++.. ++||||+++++++.+ ....
T Consensus 4 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~-~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 4 RTVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETE-LYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CCCGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHH-HHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccchhhHHHHH-HHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 45667899999999999999999876 79999999998766555556655 3344 799999999998654 4568
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+++|+|.++++. ..+++..+++++.|++.||+||
T Consensus 82 ~lv~e----------~~~~g~L~~~l~~------------------------------~~~~~~~~~~i~~~i~~~l~~l 121 (301)
T 3q4u_A 82 WLITH----------YHEMGSLYDYLQL------------------------------TTLDTVSCLRIVLSIASGLAHL 121 (301)
T ss_dssp EEEEC----------CCTTCBHHHHHTT------------------------------CCBCHHHHHHHHHHHHHHHHHH
T ss_pred EEehh----------hccCCCHHHHHhh------------------------------cccCHHHHHHHHHHHHHHHHHH
Confidence 99999 7778888888732 3477888999999999999999
Q ss_pred h--------hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc-ccCccCCCCccccccccccCC------C
Q 004442 623 H--------EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL-TQNATGYGSSGWQAPEQLLQG------R 687 (753)
Q Consensus 623 H--------~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~------~ 687 (753)
| +.+|+||||||+|||++.++ .+||+|||+++......... .......||+.|+|||++.+. .
T Consensus 122 H~~~~~~~~~~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 199 (301)
T 3q4u_A 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 199 (301)
T ss_dssp HSCBCSTTCBCEEECSCCCGGGEEECTTS--CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHH
T ss_pred HHhhhhccCCCCeecCCCChHhEEEcCCC--CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCccc
Confidence 9 89999999999999997765 49999999998765433221 122344799999999999877 4
Q ss_pred CCchhhHHHHHHHHHHHHhCC---------CCCCCCC------hHHHHHHHHc--cCcccc-----cCCCHHHHHHHHHc
Q 004442 688 QTRAIDLFSLGCILFFCITGG---------KHPYGES------FERDANIVKD--RKDLFL-----VEHIPEAVDLFTRL 745 (753)
Q Consensus 688 ~t~ksDIwSfGvvL~EllTG~---------~~Pf~~~------~~~~~~~i~~--~~~~~~-----~~~s~el~dLI~~c 745 (753)
++.++|||||||++|||+||. .+||... .......... .....+ ...++++.+||.+|
T Consensus 200 ~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 279 (301)
T 3q4u_A 200 SYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 279 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHH
Confidence 557999999999999999981 3455332 1112221111 111122 12446899999999
Q ss_pred cccCcCCC
Q 004442 746 LDPNPDLR 753 (753)
Q Consensus 746 L~~DP~~R 753 (753)
|+.||++|
T Consensus 280 l~~dP~~R 287 (301)
T 3q4u_A 280 WYQNPSAR 287 (301)
T ss_dssp CCSSGGGS
T ss_pred hhcChhhC
Confidence 99999998
No 111
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.5e-37 Score=328.41 Aligned_cols=243 Identities=23% Similarity=0.344 Sum_probs=184.7
Q ss_pred ecceEEEe-EEecccCceEEEEEEee-CCcEEEEEEeecCC---chHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 471 IGKLVVFN-KEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 471 i~~~~~i~-~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
+.+.|.+. +.||+|+||+||++... +++.||||++.... .....+|+..+.+..+||||+++++++.+++..++|
T Consensus 10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 34567774 77999999999999754 69999999996543 345667776444447899999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+.+|+|.+++... ..+++..+..++.||+.||+|||+.
T Consensus 90 ~e----------~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~i~~qi~~~l~~lH~~ 130 (316)
T 2ac3_A 90 FE----------KMRGGSILSHIHKR-----------------------------RHFNELEASVVVQDVASALDFLHNK 130 (316)
T ss_dssp EE----------CCTTCBHHHHHHHH-----------------------------SSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE----------cCCCCcHHHHHhcc-----------------------------CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99 66678888877532 3577888999999999999999999
Q ss_pred CccccCCCCCcEEEecCCC-CeEEEEeccCceeccCCCc----ccccCccCCCCccccccccccC-----CCCCchhhHH
Q 004442 626 GLIHRDLKPQNVLISKDKS-FCAKLSDMGISKRLQGDMS----CLTQNATGYGSSGWQAPEQLLQ-----GRQTRAIDLF 695 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~-~~~KLsDFGla~~~~~~~~----~~~~~~~~~GT~~Y~APE~l~~-----~~~t~ksDIw 695 (753)
+|+||||||+|||++.++. ..+||+|||+++....... ........+||+.|+|||++.+ ..++.++|||
T Consensus 131 ~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw 210 (316)
T 2ac3_A 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLW 210 (316)
T ss_dssp TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHH
T ss_pred CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccH
Confidence 9999999999999977653 3489999999986643211 1112233469999999999875 5578999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCh----------------HHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 696 SLGCILFFCITGGKHPYGESF----------------ERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 696 SfGvvL~EllTG~~~Pf~~~~----------------~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
||||++|||++| .+||.... ......+......++ ..+++++.+||++||+.||++|
T Consensus 211 slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 287 (316)
T 2ac3_A 211 SLGVILYILLSG-YPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287 (316)
T ss_dssp HHHHHHHHHHHS-SCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred hHHHHHHHHHHC-CCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhC
Confidence 999999999998 66775532 122333444443333 3578999999999999999998
No 112
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.3e-37 Score=320.50 Aligned_cols=242 Identities=25% Similarity=0.348 Sum_probs=194.3
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
....++|.+.+.||+|+||.||++...++..||||.+.... .+...+|+ .+++.++|+||+++++++.+ +..++||
T Consensus 9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEA-NLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHH-HHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHH-HHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 44457899999999999999999988888899999997543 23344455 47899999999999999864 4589999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+.+|+|.+++.... ...+++.++++++.|++.||+|||+.+
T Consensus 87 e----------~~~~~~L~~~l~~~~---------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ 129 (279)
T 1qpc_A 87 E----------YMENGSLVDFLKTPS---------------------------GIKLTINKLLDMAAQIAEGMAFIEERN 129 (279)
T ss_dssp E----------CCTTCBHHHHTTSHH---------------------------HHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred e----------cCCCCCHHHHHhcCC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9 777888888875321 125788899999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
|+||||||+||+++.++ .+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++
T Consensus 130 i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 205 (279)
T 1qpc_A 130 YIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEY--TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205 (279)
T ss_dssp EECSCCSGGGEEECTTS--CEEECCCTTCEECSSSCE--ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred eeccCCCHhhEEEcCCC--CEEECCCcccccccCccc--ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHh
Confidence 99999999999997665 499999999988754321 22233456889999999998889999999999999999999
Q ss_pred CCCCCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++.+||..... .....+... ....+..+++++.++|.+||+.||++|
T Consensus 206 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 254 (279)
T 1qpc_A 206 HGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 254 (279)
T ss_dssp TTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhC
Confidence 44778876543 333333332 344566788999999999999999998
No 113
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.4e-37 Score=333.43 Aligned_cols=273 Identities=27% Similarity=0.340 Sum_probs=192.3
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecC-------Cc-hHHHHHHHHHHHhCCCCceeeecccccCC
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKT-------HH-DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~-------~~-~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~ 539 (753)
..+.++|.+.+.||+|+||.||++.. .+++.||||++... .. +...+|+ .+++.++||||+++++++.+.
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV-RLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHH-HHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHH-HHHHhCCCCCcceeehhhccC
Confidence 44567899999999999999999976 45889999998643 11 2334454 478999999999999999999
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhh---hhhhccccc--------ccchhhhhhhcCCCCHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNE---VRIRLLPVM--------ENTKDIELWKANGHPSAQL 608 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~---~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~ 608 (753)
+..++||| |+++|+|.+++............ ......+.. .............+++..+
T Consensus 101 ~~~~lv~e----------~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
T 3hko_A 101 QYICLVME----------LCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLI 170 (345)
T ss_dssp SEEEEEEE----------CCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHH
T ss_pred CeEEEEEe----------CCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHH
Confidence 99999999 77788888888532211000000 000000000 0000000000112356778
Q ss_pred HHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCc-ccccCccCCCCccccccccccC--
Q 004442 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS-CLTQNATGYGSSGWQAPEQLLQ-- 685 (753)
Q Consensus 609 l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~-~~~~~~~~~GT~~Y~APE~l~~-- 685 (753)
+.|+.||+.||+|||+.+|+||||||+||+++.++...+||+|||+++....... .........||+.|+|||++.+
T Consensus 171 ~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 250 (345)
T 3hko_A 171 SNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250 (345)
T ss_dssp HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC
Confidence 8999999999999999999999999999999887766799999999987643211 1112334569999999999975
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 686 GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 686 ~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~-~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
..++.++|||||||++|||++| .+||..... .....+...... ....+++++.+||++||+.||++|
T Consensus 251 ~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 322 (345)
T 3hko_A 251 ESYGPKCDAWSAGVLLHLLLMG-AVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDER 322 (345)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred CCCCcHHHHHHHHHHHHHHHHC-CCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHC
Confidence 6789999999999999999999 667766533 333333333322 223478999999999999999998
No 114
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.7e-36 Score=319.38 Aligned_cols=235 Identities=23% Similarity=0.340 Sum_probs=194.1
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC-----CchHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~-----~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
.++|.+.+.||+|+||.||++... +++.||||++... .....+.++..+++.++|+||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367899999999999999999765 5789999998642 1223344444488999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.+++... ..+++..++.++.|++.||.|||+.
T Consensus 93 ~e----------~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~~l~~lH~~ 133 (284)
T 2vgo_A 93 LE----------FAPRGELYKELQKH-----------------------------GRFDEQRSATFMEELADALHYCHER 133 (284)
T ss_dssp EC----------CCTTEEHHHHHHHH-----------------------------SSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EE----------eCCCCcHHHHHHhc-----------------------------CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 66677777776432 3477888999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
+|+||||||+||+++.++. +||+|||++...... ......|++.|+|||++.+..++.++||||||+++|||+
T Consensus 134 ~i~H~dl~p~Nil~~~~~~--~kl~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 206 (284)
T 2vgo_A 134 KVIHRDIKPENLLMGYKGE--LKIADFGWSVHAPSL-----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206 (284)
T ss_dssp TEECCCCSGGGEEECTTCC--EEECCCTTCEECSSS-----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHH
T ss_pred CceecCCCHHHEEEcCCCC--EEEecccccccCccc-----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHH
Confidence 9999999999999977765 999999999766432 123456899999999999999999999999999999999
Q ss_pred hCCCCCCCCCh-HHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~-~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+| .+||.... ......+......++..+++++.++|.+||+.||++|
T Consensus 207 ~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 254 (284)
T 2vgo_A 207 VG-MPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQR 254 (284)
T ss_dssp HS-SCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred HC-CCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHHHHhhcCHhhC
Confidence 98 66776553 3344455555666778889999999999999999998
No 115
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=335.41 Aligned_cols=258 Identities=23% Similarity=0.321 Sum_probs=199.0
Q ss_pred ceecceEEEeEEecccCceEEEEEEee--------CCcEEEEEEeecCCch----HHHHHHHHHHHhC-CCCceeeeccc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY--------EGRSVAVKRLVKTHHD----VALKEIQNLIASD-QHPNIVRWYGV 535 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~--------~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l-~HpNIV~L~g~ 535 (753)
+...++|.+.+.||+|+||.||+|... .+..||||++...... ...+|+. +++.+ +||||++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hpnIv~~~~~ 143 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME-MMKMIGKHKNIINLLGA 143 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHH-HHHHhcCCchhhhheee
Confidence 444578999999999999999999753 2468999999765432 3445555 55666 99999999999
Q ss_pred ccCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHH
Q 004442 536 ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (753)
Q Consensus 536 ~~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qI 615 (753)
|.+.+..++||| |+.+|+|.+++........... ..........+++.++++|+.||
T Consensus 144 ~~~~~~~~lv~e----------~~~~g~L~~~l~~~~~~~~~~~-------------~~~~~~~~~~l~~~~~~~i~~qi 200 (382)
T 3tt0_A 144 CTQDGPLYVIVE----------YASKGNLREYLQARRPPGLEYS-------------YNPSHNPEEQLSSKDLVSCAYQV 200 (382)
T ss_dssp ECSSSSCEEEEE----------CCTTCBHHHHHHHTCCSSSSSC-------------CCCCSSCCCCCCHHHHHHHHHHH
T ss_pred eccCCceEEEEE----------ecCCCcHHHHHHHhcccccccc-------------cccccccccccCHHHHHHHHHHH
Confidence 999999999999 7778888888875432110000 00000123468999999999999
Q ss_pred HHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHH
Q 004442 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLF 695 (753)
Q Consensus 616 a~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIw 695 (753)
+.||+|||+.+|+||||||+|||++.++. +||+|||+++....... ........+|+.|+|||++.+..++.++|||
T Consensus 201 ~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw 277 (382)
T 3tt0_A 201 ARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 277 (382)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECSCSCCCCSSCCCT-TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHH
T ss_pred HHHHHHHHhCCEecCCCCcceEEEcCCCc--EEEcccCcccccccccc-cccccCCCCCcceeCHHHhcCCCCCchhHHH
Confidence 99999999999999999999999977764 99999999987654321 1223344578999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 696 SLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 696 SfGvvL~EllTG~~~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||||++|||+|++..||..... .....+... ....+..+++++.+||.+||+.||++|
T Consensus 278 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 337 (382)
T 3tt0_A 278 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQR 337 (382)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhC
Confidence 9999999999944778876543 333444333 445667789999999999999999998
No 116
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.2e-36 Score=337.15 Aligned_cols=237 Identities=24% Similarity=0.392 Sum_probs=180.8
Q ss_pred ecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCC--CCceeeecccccCCceEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQ--HPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~--HpNIV~L~g~~~~~~~~~ 543 (753)
.++.|.+.+.||+|+||.||++...+++.||||++..... +...+|+. ++..++ |+||+++++++...+..|
T Consensus 54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~-~l~~l~~~~~~iv~~~~~~~~~~~~~ 132 (390)
T 2zmd_A 54 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA-YLNKLQQHSDKIIRLYDYEITDQYIY 132 (390)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred cCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHH-HHHHcccCCCeEEEEEEEEecCCEEE
Confidence 3467999999999999999999888899999999965431 23445555 566665 599999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+|||++. |+|.+++.. ...+++.++..++.||+.||.|||
T Consensus 133 lv~E~~~-----------~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~aL~~lH 172 (390)
T 2zmd_A 133 MVMECGN-----------IDLNSWLKK-----------------------------KKSIDPWERKSYWKNMLEAVHTIH 172 (390)
T ss_dssp EEEECCS-----------EEHHHHHHH-----------------------------CSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-----------CCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999433 445555432 235677788999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-----------CCCCchh
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-----------GRQTRAI 692 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~t~ks 692 (753)
+.+|+||||||+|||++ ++ .+||+|||+++........ ......+||+.|+|||++.+ ..++.++
T Consensus 173 ~~~ivHrDlkp~NIll~-~~--~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
T 2zmd_A 173 QHGIVHSDLKPANFLIV-DG--MLKLIDFGIANQMQPDTTS-VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKS 248 (390)
T ss_dssp TTTCCCCCCCGGGEEES-SS--CEEECCCSSSCCC----------CCSCCCGGGCCHHHHHCC------------CCHHH
T ss_pred HCCeeecCCCHHHEEEE-CC--eEEEEecCccccccCCCcc-ccCCCCCcCCCccChHHhhhccccccccccccCCCChh
Confidence 99999999999999994 33 4999999999876543211 12234579999999999875 4689999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHcc--CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 693 DLFSLGCILFFCITGGKHPYGESFER--DANIVKDR--KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 693 DIwSfGvvL~EllTG~~~Pf~~~~~~--~~~~i~~~--~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||||||++|||++| .+||...... ....+... ...++...++++.+||.+||+.||++|
T Consensus 249 DiwSlGvil~ell~G-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 312 (390)
T 2zmd_A 249 DVWSLGCILYYMTYG-KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312 (390)
T ss_dssp HHHHHHHHHHHHHHS-SCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTS
T ss_pred hHHHHHHHHHHHHHC-CCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhC
Confidence 999999999999998 6788654322 22222222 233455667899999999999999998
No 117
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.9e-37 Score=325.04 Aligned_cols=240 Identities=27% Similarity=0.361 Sum_probs=190.6
Q ss_pred cceEEEeEEecccCceEEEEEE-----eeCCcEEEEEEeecCC---c-hHHHHHHHHHHHhCCCCceeeecccccCC--c
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTH---H-DVALKEIQNLIASDQHPNIVRWYGVESDQ--D 540 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~-----~~~g~~VAVK~l~~~~---~-~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~--~ 540 (753)
.+.|++.+.||+|+||.||++. ..+++.||||++.... . ....+|+ .+++.++|+||+++++++.+. +
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEI-EILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHH-HHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHH-HHHHhCCCCCeeeeeeEEecCCCc
Confidence 4568899999999999999987 3468999999997542 1 3344455 478999999999999999876 6
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++||| |+.+|+|.+++... ...+++.+++.++.|++.||+
T Consensus 99 ~~~lv~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~i~~~l~ 140 (302)
T 4e5w_A 99 GIKLIME----------FLPSGSLKEYLPKN----------------------------KNKINLKQQLKYAVQICKGMD 140 (302)
T ss_dssp CEEEEEE----------CCTTCBHHHHHHHH----------------------------TTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEE----------eCCCCcHHHHHHhc----------------------------cccCCHHHHHHHHHHHHHHHH
Confidence 7899999 67778888887532 234788899999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
|||+.+|+||||||+||+++.++ .+||+|||+++................||..|+|||++.+..++.++||||||++
T Consensus 141 ~lH~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 218 (302)
T 4e5w_A 141 YLGSRQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT 218 (302)
T ss_dssp HHHHTTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred HhhcCCcccCCCchheEEEcCCC--CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHH
Confidence 99999999999999999998776 4999999999987655443344455668999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCh----------------HHHHHHH-HccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESF----------------ERDANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~----------------~~~~~~i-~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||+|| ..|+.... ......+ .......+..+++++.+||.+||+.||++|
T Consensus 219 l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 287 (302)
T 4e5w_A 219 LHELLTY-CDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNR 287 (302)
T ss_dssp HHHHHTT-TCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred HHHHHHc-cCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCC
Confidence 9999998 44543221 1111112 223345667889999999999999999998
No 118
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.1e-36 Score=317.75 Aligned_cols=237 Identities=22% Similarity=0.333 Sum_probs=189.4
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC---------chHHHHHHHHHHHhCCCCceeeecccccCCce
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---------HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~ 541 (753)
.++|.+.+.||+|+||.||++... +|+.||||.+.... .+...+|+. +++.++||||+++++++.+.+.
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN-ILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHH-HHHhCCCCCeeehhheecCCCe
Confidence 467899999999999999999776 58999999986532 223444554 7899999999999999999999
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+++|+|.+++.. ...+++.+++.++.|++.||.|
T Consensus 83 ~~lv~e----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~ 123 (283)
T 3bhy_A 83 VVLILE----------LVSGGELFDFLAE-----------------------------KESLTEDEATQFLKQILDGVHY 123 (283)
T ss_dssp EEEEEE----------CCCSCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEe----------ecCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 999999 6667788777643 2357888999999999999999
Q ss_pred hhhCCccccCCCCCcEEEecCC--CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 699 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d~--~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGv 699 (753)
||+.+|+||||||+||+++.++ ...+||+|||++....... ......||+.|+|||++.+..++.++||||||+
T Consensus 124 lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 199 (283)
T 3bhy_A 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 199 (283)
T ss_dssp HHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHH
T ss_pred HHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC----cccccCCCcCccCcceecCCCCCcchhhhhHHH
Confidence 9999999999999999997765 2259999999998765422 123346899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCChH-HHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGESFE-RDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~~-~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||++| ..||..... .....+...... .....++++.+||++||..||++|
T Consensus 200 il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 257 (283)
T 3bhy_A 200 ITYILLSG-ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 257 (283)
T ss_dssp HHHHHHHS-SCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGS
T ss_pred HHHHHHHC-CCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHC
Confidence 99999998 567765533 333333333322 235678899999999999999998
No 119
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.2e-37 Score=330.57 Aligned_cols=239 Identities=23% Similarity=0.298 Sum_probs=185.4
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCc----EEEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGR----SVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~----~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
.++|.+.+.||+|+||+||+|... +++ .||+|.+.... ...+.+|+ .+++.++||||++++++|.+.+ .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA-YVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHH-HHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHH-HHHHhCCCCCEeEEEEEEecCC-e
Confidence 466899999999999999999754 344 46888875432 22344454 4789999999999999998765 7
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++|+| |+.+|+|.++++.. ...+++..+++++.||+.||+||
T Consensus 92 ~~v~e----------~~~~g~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~L 133 (327)
T 3poz_A 92 QLITQ----------LMPFGCLLDYVREH----------------------------KDNIGSQYLLNWCVQIAKGMNYL 133 (327)
T ss_dssp EEEEE----------CCTTCBHHHHHHHS----------------------------TTSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE----------ecCCCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 78999 77889999888643 23578889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
|+.+|+||||||+|||++.++. +||+|||+++........ .......+|..|+|||++.+..++.++|||||||++|
T Consensus 134 H~~~ivH~Dikp~NIll~~~~~--~kl~Dfg~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ 210 (327)
T 3poz_A 134 EDRRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGAEEKE-YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210 (327)
T ss_dssp HHTTCCCSCCCGGGEEEEETTE--EEECCTTHHHHHTTTCC--------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred hhCCeeCCCCChheEEECCCCC--EEEccCcceeEccCCccc-ccccCCCccccccChHHhccCCCCchhhhhhhHHHHH
Confidence 9999999999999999987764 999999999877543221 2223345788999999999999999999999999999
Q ss_pred HHHhCCCCCCCCChHHH-HHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFERD-ANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~~~-~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+|++.+||....... ...+.. .....+..+++++.++|.+||+.||++|
T Consensus 211 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 263 (327)
T 3poz_A 211 ELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSR 263 (327)
T ss_dssp HHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGS
T ss_pred HHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhC
Confidence 99993377887654433 333333 3345667788999999999999999998
No 120
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.3e-36 Score=324.80 Aligned_cols=249 Identities=21% Similarity=0.278 Sum_probs=185.5
Q ss_pred cceecceEEEeEEecccCceEEEEEEeeC----CcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccC
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD 538 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~~~----g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~ 538 (753)
.....++|.+.+.||+|+||.||+|.... +..||||++..... +.+.+|+ .+++.++||||+++++++.+
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEA-ACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHH-HHHHTCCCTTBCCCCEEEEC
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHH-HHHhcCCCCCeeeeeEEEee
Confidence 34556789999999999999999986653 45899999875421 2234444 47899999999999999887
Q ss_pred Cce-----EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHH
Q 004442 539 QDF-----VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (753)
Q Consensus 539 ~~~-----~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~ 613 (753)
.+. .++||| |+.+|+|.+++...... .....+++..+++++.
T Consensus 108 ~~~~~~~~~~~v~e----------~~~~~~L~~~l~~~~~~-----------------------~~~~~~~~~~~~~i~~ 154 (313)
T 3brb_A 108 MSSQGIPKPMVILP----------FMKYGDLHTYLLYSRLE-----------------------TGPKHIPLQTLLKFMV 154 (313)
T ss_dssp -------CEEEEEE----------CCTTCBHHHHHHHTTBT-----------------------TSCCCCCHHHHHHHHH
T ss_pred ccccCCcccEEEEe----------cccCCCHHHHHHHhhhh-----------------------cCCccCCHHHHHHHHH
Confidence 553 599999 77788888887543221 1235688999999999
Q ss_pred HHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhh
Q 004442 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAID 693 (753)
Q Consensus 614 qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksD 693 (753)
||+.||.|||+.+|+||||||+||+++.++. +||+|||+++....... ........+++.|+|||.+.+..++.++|
T Consensus 155 qi~~aL~~LH~~~ivH~dikp~NIli~~~~~--~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 231 (313)
T 3brb_A 155 DIALGMEYLSNRNFLHRDLAARNCMLRDDMT--VCVADFGLSKKIYSGDY-YRQGRIAKMPVKWIAIESLADRVYTSKSD 231 (313)
T ss_dssp HHHHHHHHHHTTTCCCCCCSGGGEEECTTSC--EEECSCSCC-----------------CCGGGSCHHHHHSSCCCHHHH
T ss_pred HHHHHHHHHHhCCcccCCCCcceEEEcCCCc--EEEeecCcceecccccc-cCcccccCCCccccCchhhcCCCccchhh
Confidence 9999999999999999999999999977654 99999999987654321 11223345788999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCChHH-HHHHH-HccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 694 LFSLGCILFFCITGGKHPYGESFER-DANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 694 IwSfGvvL~EllTG~~~Pf~~~~~~-~~~~i-~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||||+++|||++++.+||...... ....+ .......+..+++++.++|.+||..||++|
T Consensus 232 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 293 (313)
T 3brb_A 232 VWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDR 293 (313)
T ss_dssp HHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGS
T ss_pred hHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhC
Confidence 9999999999999557888765433 33333 333455677889999999999999999998
No 121
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=322.83 Aligned_cols=236 Identities=25% Similarity=0.395 Sum_probs=169.1
Q ss_pred ceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC-----c-hHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----H-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~-----~-~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
++|.+.+.||+|+||.||++.. .+|+.||||.+.... . +...+|+ .+++.++||||+++++++.+.+..++|
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV-KIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHH-HHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHH-HHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 5689999999999999999976 469999999996432 1 2334444 478899999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.+++... ...+++.+++.++.|++.||+|||+.
T Consensus 90 ~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~ 131 (278)
T 3cok_A 90 LE----------MCHNGEMNRYLKNR----------------------------VKPFSENEARHFMHQIITGMLYLHSH 131 (278)
T ss_dssp EE----------CCTTEEHHHHHHTC----------------------------SSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred Ee----------cCCCCcHHHHHhhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 66677777776432 24578889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
+|+||||||+||+++.++. +||+|||++........ ......||+.|+|||.+.+..++.++||||||+++|||+
T Consensus 132 ~i~H~dl~p~Nili~~~~~--~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 206 (278)
T 3cok_A 132 GILHRDLTLSNLLLTRNMN--IKIADFGLATQLKMPHE---KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLL 206 (278)
T ss_dssp TEECSSCCGGGEEECTTCC--EEECCCTTCEECC-------------------------------CTHHHHHHHHHHHHH
T ss_pred CeecCCCCHHHEEEcCCCC--EEEEeecceeeccCCCC---cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999977754 99999999987653221 122346899999999999988999999999999999999
Q ss_pred hCCCCCCCCChH-HHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~-~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+| .+||..... .....+.......+..+++++.++|.+||+.||++|
T Consensus 207 ~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 254 (278)
T 3cok_A 207 IG-RPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADR 254 (278)
T ss_dssp HS-SCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred hC-CCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHHHcccCHhhC
Confidence 98 667765432 222222223334566788999999999999999998
No 122
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=9.4e-37 Score=326.80 Aligned_cols=252 Identities=19% Similarity=0.269 Sum_probs=197.7
Q ss_pred ceecceEEEeEEecccCceEEEEEEee------CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccC
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESD 538 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~------~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~ 538 (753)
+...++|.+.+.||+|+||.||+|... .++.||||.+...... ...+|+. +++.++|+||+++++++.+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS-VMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHH-HGGGCCCTTBCCEEEEECS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHH-HHHhcCCCCEeeeEEEEcc
Confidence 455678999999999999999998654 3789999999765432 2334444 7789999999999999999
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++||| |+.+|+|.+++........ .......+++..+++++.||+.|
T Consensus 100 ~~~~~lv~e----------~~~~~~L~~~l~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~qi~~~ 150 (322)
T 1p4o_A 100 GQPTLVIME----------LMTRGDLKSYLRSLRPAMA-------------------NNPVLAPPSLSKMIQMAGEIADG 150 (322)
T ss_dssp SSSCEEEEE----------CCTTCBHHHHHHHHHHHHH-------------------HCTTCCCCCHHHHHHHHHHHHHH
T ss_pred CCccEEEEE----------eCCCCcHHHHHHHhchhhc-------------------cCCCCCCcCHHHHHHHHHHHHHH
Confidence 999999999 6677888888765432100 00112456888999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
|.|||+.+|+||||||+||+++.++. +||+|||+++....... ........+|+.|+|||++.+..++.++||||||
T Consensus 151 l~~lH~~~i~H~dikp~NIli~~~~~--~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 227 (322)
T 1p4o_A 151 MAYLNANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227 (322)
T ss_dssp HHHHHHTTCBCSCCSGGGEEECTTCC--EEECCTTCCCGGGGGGC-EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred HHHHHHCCCccCCCccceEEEcCCCe--EEECcCccccccccccc-cccccCCCCCCCccChhhhccCCCCchhhHHHHH
Confidence 99999999999999999999977754 99999999986643221 1222334578899999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCChHH-HHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGESFER-DANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~~~-~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||+||+.+||...... ....+.. .....+..+++++.++|.+||+.||++|
T Consensus 228 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 284 (322)
T 1p4o_A 228 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMR 284 (322)
T ss_dssp HHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence 99999999557888765433 3333333 3345667889999999999999999998
No 123
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-36 Score=319.55 Aligned_cols=240 Identities=20% Similarity=0.302 Sum_probs=190.4
Q ss_pred ceEEEeEEecccCceEEEEEEeeC----CcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCCceE-E
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFV-Y 543 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~~----g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~-~ 543 (753)
..|...+.||+|+||+||+|...+ +..||||.+...... .+.+|+ .+++.++||||+++++++.+.+.. +
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREG-LLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHH-HHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHH-HHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 356778999999999999997543 237999999754432 233444 478999999999999999876655 9
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++... ...+++..++.++.|++.||+|||
T Consensus 100 ~v~e----------~~~~~~L~~~~~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~LH 141 (298)
T 3pls_A 100 VLLP----------YMCHGDLLQFIRSP----------------------------QRNPTVKDLISFGLQVARGMEYLA 141 (298)
T ss_dssp EEEC----------CCTTCBHHHHHHCT----------------------------TCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------cccCCCHHHHHhcc----------------------------ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 77788888887532 245678889999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCc-ccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS-CLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~-~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
+.+|+||||||+||+++.++. +||+|||+++....... .........+|+.|+|||.+.+..++.++|||||||++|
T Consensus 142 ~~~i~H~dikp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 219 (298)
T 3pls_A 142 EQKFVHRDLAARNCMLDESFT--VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLW 219 (298)
T ss_dssp HTTCCCSCCSGGGEEECTTCC--EEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred hCCcccCCCCcceEEEcCCCc--EEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHH
Confidence 999999999999999977654 99999999986643211 112223446789999999999999999999999999999
Q ss_pred HHHhCCCCCCCCChHHHH-HHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFERDA-NIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~~~~-~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+||+.+||........ ..+.. .....+..+++++.++|.+||+.||++|
T Consensus 220 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 272 (298)
T 3pls_A 220 ELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVR 272 (298)
T ss_dssp HHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhC
Confidence 999987888876644333 33333 3345667788999999999999999998
No 124
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=325.26 Aligned_cols=234 Identities=27% Similarity=0.390 Sum_probs=182.6
Q ss_pred ceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEccccCC
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~c~~~ 552 (753)
++|.+.+.||+|+||+||++.. .++.||||++........+..+..+++.++||||+++++++.+ ..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e----- 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME----- 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE-----
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE-----
Confidence 5688999999999999999865 5789999999766544444444457899999999999999874 4789999
Q ss_pred hhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh---CCccc
Q 004442 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE---IGLIH 629 (753)
Q Consensus 553 L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~---~~IiH 629 (753)
|+++|+|.++++.... ...+++..+++++.|+++||+|||+ .+|+|
T Consensus 80 -----~~~~~~L~~~l~~~~~--------------------------~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH 128 (307)
T 2eva_A 80 -----YAEGGSLYNVLHGAEP--------------------------LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128 (307)
T ss_dssp -----CCTTCBHHHHHHCSSS--------------------------EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCC
T ss_pred -----cCCCCCHHHHHhccCC--------------------------CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeec
Confidence 7778888888764321 1246778889999999999999999 89999
Q ss_pred cCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 004442 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGK 709 (753)
Q Consensus 630 rDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~ 709 (753)
|||||+||+++.++. .+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||+|| +
T Consensus 129 ~dlkp~NIll~~~~~-~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g-~ 200 (307)
T 2eva_A 129 RDLKPPNLLLVAGGT-VLKICDFGTACDIQTH------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR-R 200 (307)
T ss_dssp CCCSGGGEEEETTTT-EEEECCCCC------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHT-C
T ss_pred CCCChhHEEEeCCCC-EEEEcccccccccccc------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHC-C
Confidence 999999999987763 5799999999765432 1233589999999999999999999999999999999998 6
Q ss_pred CCCCCChH---HHH-HHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 710 HPYGESFE---RDA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 710 ~Pf~~~~~---~~~-~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.||..... ... ..........+..+++++.++|.+||+.||++|
T Consensus 201 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 248 (307)
T 2eva_A 201 KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQR 248 (307)
T ss_dssp CTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhC
Confidence 68865322 122 222333445667889999999999999999998
No 125
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-36 Score=327.46 Aligned_cols=244 Identities=25% Similarity=0.331 Sum_probs=186.1
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeC-----CcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCC
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-----GRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQ 539 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~-----g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~ 539 (753)
+.....|.+.+.||+|+||.||+|.... +..||||++...... ...+|+ .+++.++||||+++++++.+.
T Consensus 40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~ 118 (333)
T 1mqb_A 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA-GIMGQFSHHNIIRLEGVISKY 118 (333)
T ss_dssp BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEECSS
T ss_pred cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHH-HHHHhCCCCCCCcEEEEEecC
Confidence 3445678899999999999999987653 346999999764322 233444 478999999999999999999
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
+..++||| |+.+|+|.+++... ...+++.++++++.||+.||
T Consensus 119 ~~~~lv~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~aL 160 (333)
T 1mqb_A 119 KPMMIITE----------YMENGALDKFLREK----------------------------DGEFSVLQLVGMLRGIAAGM 160 (333)
T ss_dssp SSEEEEEE----------CCTTEEHHHHHHHT----------------------------TTCSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe----------CCCCCcHHHHHHhC----------------------------CCCCCHHHHHHHHHHHHHHH
Confidence 99999999 66677888777532 23578889999999999999
Q ss_pred HHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHH
Q 004442 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 699 (753)
Q Consensus 620 ~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGv 699 (753)
+|||+.+|+||||||+||+++.++ .+||+|||+++................+|+.|+|||++.+..++.++|||||||
T Consensus 161 ~~LH~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 238 (333)
T 1mqb_A 161 KYLANMNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGI 238 (333)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTC--CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHH
T ss_pred HHHHhCCeeCCCCChheEEECCCC--cEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHH
Confidence 999999999999999999997765 499999999987754332222223334688999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCh-HHHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~-~~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||++++..||.... ......+... ..+.+..+++++.++|.+||+.||++|
T Consensus 239 il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 294 (333)
T 1mqb_A 239 VMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARR 294 (333)
T ss_dssp HHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhC
Confidence 99999993367776543 3333333333 445566789999999999999999998
No 126
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.5e-37 Score=321.58 Aligned_cols=243 Identities=23% Similarity=0.312 Sum_probs=196.5
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCCc--hHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
+...++|++.+.||+|+||.||++.... +..||||.+..... +...+|+ .+++.++|+||+++++++.+.+..++|
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA-AVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHH-HHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHH-HHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 3456779999999999999999997765 88999999976542 2344555 488999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+.+|+|.+++... ....+++..++.++.|++.||+|||+.
T Consensus 88 ~e----------~~~~~~L~~~~~~~---------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~ 130 (288)
T 3kfa_A 88 TE----------FMTYGNLLDYLREC---------------------------NRQEVSAVVLLYMATQISSAMEYLEKK 130 (288)
T ss_dssp EE----------CCTTEEHHHHHHHC---------------------------CTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EE----------cCCCCcHHHHHHhc---------------------------ccCCccHhHHHHHHHHHHHHHHHHHHC
Confidence 99 66677888777532 124578889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
+|+||||||+||+++.++. +||+|||++........ .......+|+.|+|||++.+..++.++||||||+++|+|+
T Consensus 131 ~i~H~dikp~Nil~~~~~~--~~l~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll 206 (288)
T 3kfa_A 131 NFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206 (288)
T ss_dssp TCCCSCCSGGGEEECGGGC--EEECCCCGGGTSCSSSS--EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCcceEEEcCCCC--EEEccCccceeccCCcc--ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999977654 99999999987654322 1222334688999999999999999999999999999999
Q ss_pred hCCCCCCCCChHH-HHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFER-DANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~~-~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+++.+||...... ....+.. .....+..+++++.+||.+||+.||++|
T Consensus 207 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 256 (288)
T 3kfa_A 207 TYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDR 256 (288)
T ss_dssp TTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred hCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhC
Confidence 9447888765433 3333333 3445667789999999999999999998
No 127
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6e-37 Score=330.97 Aligned_cols=239 Identities=22% Similarity=0.290 Sum_probs=178.0
Q ss_pred eecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
...++|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.++||||+++++++.+.+..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVS-LLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHH-HGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHH-HHHHcCCCCcceEEEEEecCCEEE
Confidence 3446799999999999999999965 4689999999965432 22345554 778999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+|||||+++| .+++.. ...+++..+..|+.||+.||+|||
T Consensus 110 lv~e~~~~~L-----------~~~~~~-----------------------------~~~~~~~~~~~i~~ql~~~l~~LH 149 (329)
T 3gbz_A 110 LIFEYAENDL-----------KKYMDK-----------------------------NPDVSMRVIKSFLYQLINGVNFCH 149 (329)
T ss_dssp EEEECCSEEH-----------HHHHHH-----------------------------CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCH-----------HHHHhh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999666544 444321 235788889999999999999999
Q ss_pred hCCccccCCCCCcEEEecCC---CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCC-CCchhhHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDK---SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGR-QTRAIDLFSLGC 699 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~---~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~t~ksDIwSfGv 699 (753)
+.+|+||||||+|||++.++ ...+||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||
T Consensus 150 ~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 226 (329)
T 3gbz_A 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI---RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIAC 226 (329)
T ss_dssp HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc---cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHH
Confidence 99999999999999996432 2459999999998765322 1223446899999999998754 899999999999
Q ss_pred HHHHHHhCCCCCCCCChHH-HHHHHHcc-Cc-----------------------------ccccCCCHHHHHHHHHcccc
Q 004442 700 ILFFCITGGKHPYGESFER-DANIVKDR-KD-----------------------------LFLVEHIPEAVDLFTRLLDP 748 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~~~-~~~~i~~~-~~-----------------------------~~~~~~s~el~dLI~~cL~~ 748 (753)
++|||++| .+||...... ....+... .. .....+++++.+||++||+.
T Consensus 227 il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 305 (329)
T 3gbz_A 227 IWAEMLMK-TPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEM 305 (329)
T ss_dssp HHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCS
T ss_pred HHHHHHHC-CCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccC
Confidence 99999998 6677655332 22222110 00 01112678999999999999
Q ss_pred CcCCC
Q 004442 749 NPDLR 753 (753)
Q Consensus 749 DP~~R 753 (753)
||++|
T Consensus 306 dP~~R 310 (329)
T 3gbz_A 306 DPVKR 310 (329)
T ss_dssp SGGGS
T ss_pred ChhhC
Confidence 99998
No 128
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1e-36 Score=332.27 Aligned_cols=204 Identities=25% Similarity=0.319 Sum_probs=165.1
Q ss_pred ccceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC--chHHHHHHHHHHHhCC-----CCceeeecccccC
Q 004442 467 DGRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--HDVALKEIQNLIASDQ-----HPNIVRWYGVESD 538 (753)
Q Consensus 467 ~~~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~-----HpNIV~L~g~~~~ 538 (753)
.+..+.++|.+.+.||+|+||+||++.. .+++.||||++.... ......|.. ++..++ |+||+++++++..
T Consensus 29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~-~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEAD-ILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp TTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHH-HHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred cceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHH-HHHHhcccCCCCCCeecccceeeE
Confidence 3467788999999999999999999976 468999999997532 223334444 667665 9999999999999
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++|||+| +|+|.+++.... ...+++..+..++.||+.|
T Consensus 108 ~~~~~lv~e~~-----------~~~L~~~~~~~~---------------------------~~~~~~~~~~~i~~qi~~a 149 (360)
T 3llt_A 108 YDHMCLIFEPL-----------GPSLYEIITRNN---------------------------YNGFHIEDIKLYCIEILKA 149 (360)
T ss_dssp TTEEEEEECCC-----------CCBHHHHHHHTT---------------------------TCCCCHHHHHHHHHHHHHH
T ss_pred CCeeEEEEcCC-----------CCCHHHHHHhcC---------------------------CCCCCHHHHHHHHHHHHHH
Confidence 99999999954 455655554321 2357888999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecC-----------------------CCCeEEEEeccCceeccCCCcccccCccCCCCc
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKD-----------------------KSFCAKLSDMGISKRLQGDMSCLTQNATGYGSS 675 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d-----------------------~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~ 675 (753)
|+|||+.+|+||||||+|||++.+ ....+||+|||+++..... .....||+
T Consensus 150 L~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------~~~~~gt~ 223 (360)
T 3llt_A 150 LNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY------HGSIINTR 223 (360)
T ss_dssp HHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC------CCSCCSCG
T ss_pred HHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC------CcCccCcc
Confidence 999999999999999999999641 1345999999999875432 23456899
Q ss_pred cccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Q 004442 676 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF 716 (753)
Q Consensus 676 ~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~ 716 (753)
.|+|||++.+..++.++|||||||++|||+|| .+||....
T Consensus 224 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~ 263 (360)
T 3llt_A 224 QYRAPEVILNLGWDVSSDMWSFGCVLAELYTG-SLLFRTHE 263 (360)
T ss_dssp GGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS-SCSCCCSS
T ss_pred cccCcHHHcCCCCCCccchHHHHHHHHHHHHC-CCCCCCCc
Confidence 99999999999999999999999999999999 66776543
No 129
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.4e-37 Score=346.83 Aligned_cols=196 Identities=27% Similarity=0.388 Sum_probs=155.0
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCC----
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~---- 539 (753)
.+.++|.+.+.||+|+||+||+|... +|+.||||++.... .....+|+. +++.++||||+++++++...
T Consensus 59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHH-HHHHCCCTTBCCCSEEECSCCSTT
T ss_pred eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHH-HHHhCCCCCCCcEEEEEccCCccc
Confidence 44578999999999999999999654 58999999997532 223455555 78999999999999998654
Q ss_pred --ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 540 --~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
...|+|||||.+++.+.+ ...+++..+..++.||+.
T Consensus 138 ~~~~~~lv~E~~~~~l~~~~------------------------------------------~~~l~~~~~~~~~~qil~ 175 (464)
T 3ttj_A 138 EFQDVYLVMELMDANLCQVI------------------------------------------QMELDHERMSYLLYQMLC 175 (464)
T ss_dssp TCCEEEEEEECCSEEHHHHH------------------------------------------TSCCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCHHHHH------------------------------------------hhcCCHHHHHHHHHHHHH
Confidence 467999996665433222 123677888999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHH
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSL 697 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSf 697 (753)
||+|||+.+|+||||||+|||++.++. +||+|||+++..... ......+||+.|+|||++.+..++.++|||||
T Consensus 176 aL~~lH~~~iiHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 249 (464)
T 3ttj_A 176 GIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTS----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 249 (464)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCCCC-----C----CCC----CCCTTCCHHHHTTCCCCTTHHHHHH
T ss_pred HHHHHHHCCcccCCCChHhEEEeCCCC--EEEEEEEeeeecCCC----cccCCCcccccccCHHHHcCCCCCHHHHHHHH
Confidence 999999999999999999999977754 999999999876532 12344579999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCC
Q 004442 698 GCILFFCITGGKHPYGES 715 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~ 715 (753)
||++|||++| ++||.+.
T Consensus 250 G~il~ell~g-~~pF~g~ 266 (464)
T 3ttj_A 250 GCIMGEMVRH-KILFPGR 266 (464)
T ss_dssp HHHHHHHHHS-SCSSCCS
T ss_pred HHHHHHHHhC-CCCCCCC
Confidence 9999999999 6677654
No 130
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-36 Score=319.74 Aligned_cols=238 Identities=24% Similarity=0.342 Sum_probs=190.3
Q ss_pred ceEEEeE-EecccCceEEEEEEee---CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 473 KLVVFNK-EIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 473 ~~~~i~~-~IG~G~fG~Vyka~~~---~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
++|.+.+ .||+|+||.||+|... .+..||||+++..... ...+|+ .+++.++||||+++++++ +.+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA-QIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHH-HHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4455555 8999999999998643 5789999999764322 234444 477889999999999999 5567899
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++... ...+++..+++++.|++.||.|||+
T Consensus 87 v~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~ 128 (287)
T 1u59_A 87 VME----------MAGGGPLHKFLVGK----------------------------REEIPVSNVAELLHQVSMGMKYLEE 128 (287)
T ss_dssp EEE----------CCTTEEHHHHHTTC----------------------------TTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE----------eCCCCCHHHHHHhC----------------------------CccCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 66677888776432 2357888999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~El 704 (753)
.+|+||||||+||+++.++ .+||+|||+++................+|+.|+|||++.+..++.++||||||+++|||
T Consensus 129 ~~i~H~dlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 206 (287)
T 1u59_A 129 KNFVHRDLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 206 (287)
T ss_dssp TTEECCCCSGGGEEEEETT--EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred CCEeeCCCchheEEEcCCC--CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 9999999999999998775 49999999999876543333333445578999999999988899999999999999999
Q ss_pred Hh-CCCCCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 IT-GGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lT-G~~~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+| | ..||..... .....+... ....+..+++++.++|.+||+.||++|
T Consensus 207 lt~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 257 (287)
T 1u59_A 207 LSYG-QKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDR 257 (287)
T ss_dssp HTTS-CCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred HcCC-CCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhC
Confidence 99 6 778866533 333333333 345677889999999999999999998
No 131
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.7e-36 Score=317.32 Aligned_cols=238 Identities=24% Similarity=0.351 Sum_probs=187.5
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCce
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~ 541 (753)
+...++|.+.+.||+|+||.||++... +|+.||||++.... .....+|+. +++.++||||+++++++.+.+.
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~ 85 (276)
T 2h6d_A 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ-NLKLFRHPHIIKLYQVISTPTD 85 (276)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSE
T ss_pred cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHH-HHhcCCCCCEeEEEEEEecCCe
Confidence 445578999999999999999999775 69999999986432 123344544 7799999999999999999999
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+.+|+|.+++... ..+++..+++++.|++.||.|
T Consensus 86 ~~lv~e----------~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~~l~~ 126 (276)
T 2h6d_A 86 FFMVME----------YVSGGELFDYICKH-----------------------------GRVEEMEARRLFQQILSAVDY 126 (276)
T ss_dssp EEEEEE----------CCCSCBHHHHHHHH-----------------------------CSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEe----------ccCCCcHHHHHhcc-----------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 999999 66677777776432 346788899999999999999
Q ss_pred hhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-CchhhHHHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCI 700 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDIwSfGvv 700 (753)
||+.+|+||||||+||+++.++. +||+|||++....... ......||+.|+|||.+.+..+ +.++||||||++
T Consensus 127 lH~~~i~H~dl~p~Nil~~~~~~--~~l~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~ 200 (276)
T 2h6d_A 127 CHRHMVVHRDLKPENVLLDAHMN--AKIADFGLSNMMSDGE----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI 200 (276)
T ss_dssp HHHHCSSCCCCCGGGEEECTTSC--EEECCCCGGGCCCC-----------------CCTGGGTTSCCCHHHHHHHHHHHH
T ss_pred HHHCCCccCCCChhhEEECCCCC--EEEeecccccccCCCc----ceecccCCccccCHHHHcCCCCCCccchHHHHHHH
Confidence 99999999999999999977654 9999999998765321 1234468999999999988776 689999999999
Q ss_pred HHHHHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++| ..||... .......+.......+..+++++.++|.+||+.||++|
T Consensus 201 l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 253 (276)
T 2h6d_A 201 LYALLCG-TLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKR 253 (276)
T ss_dssp HHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHhC-CCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHHHHccCChhhC
Confidence 9999998 6677654 34444555566666777889999999999999999998
No 132
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.9e-36 Score=344.97 Aligned_cols=239 Identities=27% Similarity=0.447 Sum_probs=193.1
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC----------------chHHHHHHHHHHHhCCCCceee
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH----------------HDVALKEIQNLIASDQHPNIVR 531 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~----------------~~~~~~Ei~~ll~~l~HpNIV~ 531 (753)
..+.+.|.+.+.||+|+||+||++... +++.||||++.... .+...+|+. +++.++||||++
T Consensus 32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~ 110 (504)
T 3q5i_A 32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS-LLKSLDHPNIIK 110 (504)
T ss_dssp SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHH-HHHTCCCTTBCC
T ss_pred CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHH-HHHhCCCCCCCe
Confidence 456788999999999999999999765 58899999996532 123445554 789999999999
Q ss_pred ecccccCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHH
Q 004442 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKV 611 (753)
Q Consensus 532 L~g~~~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~I 611 (753)
++++|.+.+..++||| |+.+|+|.+++.. ...+++..+..+
T Consensus 111 ~~~~~~~~~~~~lv~e----------~~~gg~L~~~l~~-----------------------------~~~~~~~~~~~i 151 (504)
T 3q5i_A 111 LFDVFEDKKYFYLVTE----------FYEGGELFEQIIN-----------------------------RHKFDECDAANI 151 (504)
T ss_dssp EEEEEECSSEEEEEEE----------CCTTCBHHHHHHH-----------------------------HSCCCHHHHHHH
T ss_pred EEEEEEcCCEEEEEEe----------cCCCCcHHHHHHH-----------------------------cCCCCHHHHHHH
Confidence 9999999999999999 6667788777643 245788899999
Q ss_pred HHHHHHHHHHhhhCCccccCCCCCcEEEecCCC-CeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCc
Q 004442 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS-FCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTR 690 (753)
Q Consensus 612 a~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~-~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ 690 (753)
+.||+.||+|||+.+|+||||||+|||++.++. ..+||+|||+++...... .....+||+.|+|||++. ..++.
T Consensus 152 ~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~-~~~~~ 226 (504)
T 3q5i_A 152 MKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY----KLRDRLGTAYYIAPEVLK-KKYNE 226 (504)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS----CBCCCCSCTTTCCHHHHT-TCBCT
T ss_pred HHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC----ccccccCCcCCCCHHHhc-cCCCc
Confidence 999999999999999999999999999987653 369999999998775432 223456999999999986 56999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 691 AIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 691 ksDIwSfGvvL~EllTG~~~Pf~~~~-~~~~~~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||||||++|+|++| .+||.... ......+......++ ..+++++.+||++||..||++|
T Consensus 227 ~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R 293 (504)
T 3q5i_A 227 KCDVWSCGVIMYILLCG-YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKR 293 (504)
T ss_dssp HHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred hHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHC
Confidence 99999999999999998 66776654 444455555443332 5679999999999999999998
No 133
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2e-36 Score=320.72 Aligned_cols=241 Identities=20% Similarity=0.328 Sum_probs=188.7
Q ss_pred cceEEEeEEecccCceEEEEEEeeC----CcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeeccccc-CCceE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVES-DQDFV 542 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~-~~~~~ 542 (753)
...|.+.+.||+|+||+||+|...+ ...||||.+..... +...+|+. +++.++||||++++++|. +++..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHH-HHHTCCCTTBCCCCEEECCSSSCC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHH-HHHhCCCCCEeeeeeEEEcCCCce
Confidence 3568899999999999999987543 34689999875432 23344444 789999999999999865 45678
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+.+|+|.+++... ...+++..+++++.|++.||+||
T Consensus 103 ~~v~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~ql~~~l~~l 144 (298)
T 3f66_A 103 LVVLP----------YMKHGDLRNFIRNE----------------------------THNPTVKDLIGFGLQVAKGMKYL 144 (298)
T ss_dssp EEEEE----------CCTTCBHHHHHHCT----------------------------TCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------CCCCCCHHHHHHhc----------------------------ccCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 77778888887532 23567888999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcc-cccCccCCCCccccccccccCCCCCchhhHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC-LTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL 701 (753)
|+.+|+||||||+||+++.++ .+||+|||+++........ ........||+.|+|||.+.+..++.++||||||+++
T Consensus 145 H~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 222 (298)
T 3f66_A 145 ASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 222 (298)
T ss_dssp HHTTCCCSCCSGGGEEECTTC--CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HhCCccCCCCchheEEECCCC--CEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHH
Confidence 999999999999999997665 4999999999876542211 1122334578899999999999999999999999999
Q ss_pred HHHHhCCCCCCCCChHHH-HH-HHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGESFERD-AN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~~~~-~~-~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++|+.+||....... .. .........+..+++++.++|.+||+.||++|
T Consensus 223 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 276 (298)
T 3f66_A 223 WELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMR 276 (298)
T ss_dssp HHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhC
Confidence 999998788887654332 22 23333444566788999999999999999998
No 134
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.6e-36 Score=320.38 Aligned_cols=242 Identities=20% Similarity=0.267 Sum_probs=186.9
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-hHHHHHHHHHHHhCCCCceeeecccc-cCCceEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVE-SDQDFVYLS 545 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~L~g~~-~~~~~~~LV 545 (753)
..++++|.+.+.||+|+||.||++.. .+|+.||||++..... ....+|+. +++.++|+|++..++++ .+.+..++|
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESK-IYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHH-HHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ceeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHH-HHHHhhcCCCCCccccccCCCCceEEE
Confidence 35678899999999999999999976 5799999999876543 34445554 77888888876666655 567788999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+ +|+|.+++... ...+++.++++++.|++.||+|||+.
T Consensus 84 ~e----------~~-~~~L~~~~~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~ 124 (296)
T 3uzp_A 84 ME----------LL-GPSLEDLFNFC----------------------------SRKFSLKTVLLLADQMISRIEYIHSK 124 (296)
T ss_dssp EE----------CC-CCBHHHHHHHT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE----------ec-CCCHHHHHHhh----------------------------ccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99 55 56666665421 23578889999999999999999999
Q ss_pred CccccCCCCCcEEEe---cCCCCeEEEEeccCceeccCCCccc----ccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 626 GLIHRDLKPQNVLIS---KDKSFCAKLSDMGISKRLQGDMSCL----TQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 626 ~IiHrDLKp~NILL~---~d~~~~~KLsDFGla~~~~~~~~~~----~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
+|+||||||+|||++ .++ .+||+|||+++......... .......||+.|+|||++.+..++.++||||||
T Consensus 125 ~ivH~dlkp~NIl~~~~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 202 (296)
T 3uzp_A 125 NFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLG 202 (296)
T ss_dssp TEECSCCCGGGEEECCGGGTT--CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred CeeeCCCCHHHeEEecCCCCC--eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHH
Confidence 999999999999994 444 59999999999876542211 122445799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCh----HHHHHHHHccC-----cccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGESF----ERDANIVKDRK-----DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~----~~~~~~i~~~~-----~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||++| +.||.... ......+.... ......+++++.++|++||+.||++|
T Consensus 203 ~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 265 (296)
T 3uzp_A 203 YVLMYFNLG-SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDK 265 (296)
T ss_dssp HHHHHHHHS-SCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCC
T ss_pred HHHHHHHhC-CCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcC
Confidence 999999998 67776521 11222222211 12336788999999999999999998
No 135
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1e-36 Score=342.43 Aligned_cols=252 Identities=38% Similarity=0.720 Sum_probs=183.2
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEcc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~ 548 (753)
..+.+.|...+.||+|+||+||++...+|+.||||++.....+...+|+..+....+|||||++++++.+++..++|||+
T Consensus 11 ~~l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp CSCSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred hhhhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 34456677889999999999998888889999999998766566677877554456999999999999999999999996
Q ss_pred ccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCcc
Q 004442 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (753)
Q Consensus 549 c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~Ii 628 (753)
|.++ |.+++........ ......+..+++++.||+.||+|||+.+|+
T Consensus 91 ~~gs-----------L~~~l~~~~~~~~----------------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 137 (434)
T 2rio_A 91 CNLN-----------LQDLVESKNVSDE----------------------NLKLQKEYNPISLLRQIASGVAHLHSLKII 137 (434)
T ss_dssp CSEE-----------HHHHHHTC----------------------------------CCHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCC-----------HHHHHhccCCCch----------------------hhhhccchhHHHHHHHHHHHHHHHHHCCcc
Confidence 6544 4444432211000 000112234578999999999999999999
Q ss_pred ccCCCCCcEEEecC-----------CCCeEEEEeccCceeccCCCccc-ccCccCCCCccccccccccC-------CCCC
Q 004442 629 HRDLKPQNVLISKD-----------KSFCAKLSDMGISKRLQGDMSCL-TQNATGYGSSGWQAPEQLLQ-------GRQT 689 (753)
Q Consensus 629 HrDLKp~NILL~~d-----------~~~~~KLsDFGla~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~-------~~~t 689 (753)
||||||+|||++.+ +...+||+|||+++......... .......||+.|+|||++.+ ..++
T Consensus 138 HrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 217 (434)
T 2rio_A 138 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLT 217 (434)
T ss_dssp CCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCC
T ss_pred ccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcc
Confidence 99999999999764 34579999999999876532211 12234569999999999976 6689
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCccc------ccCCCHHHHHHHHHccccCcCCC
Q 004442 690 RAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLF------LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 690 ~ksDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~------~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.++|||||||++|||+|++.+||++........+....... ...+++++.+||.+||+.||++|
T Consensus 218 ~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 287 (434)
T 2rio_A 218 RSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR 287 (434)
T ss_dssp THHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGS
T ss_pred hhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhC
Confidence 99999999999999999558899776554444433322111 12335789999999999999998
No 136
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.7e-37 Score=344.11 Aligned_cols=241 Identities=32% Similarity=0.632 Sum_probs=181.6
Q ss_pred ceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHhC-CCCceeeecccccCCceEEEEEccccC
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLSLERCTC 551 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~LV~E~c~~ 551 (753)
..|...+.||+|+||+||.....+|+.||||++.........+|+. +++.+ +|||||++++++.+.+..|+|||+|.+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~-~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g 102 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQ-LLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA 102 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHH-HHHHSCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHH-HHHhccCCCCcCeEEEEEecCCEEEEEEECCCC
Confidence 4688999999999999887778889999999998766555667776 55666 899999999999999999999997765
Q ss_pred ChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccccC
Q 004442 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (753)
Q Consensus 552 ~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrD 631 (753)
+|.++ +.... ..+.+..++.++.||+.||+|||+.+|+|||
T Consensus 103 ~L~~~-----------l~~~~----------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD 143 (432)
T 3p23_A 103 TLQEY-----------VEQKD----------------------------FAHLGLEPITLLQQTTSGLAHLHSLNIVHRD 143 (432)
T ss_dssp EHHHH-----------HHSSS----------------------------CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CHHHH-----------HHhcC----------------------------CCccchhHHHHHHHHHHHHHHHHHCcCEeCC
Confidence 55444 33221 1122234578999999999999999999999
Q ss_pred CCCCcEEEe---cCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc---CCCCCchhhHHHHHHHHHHHH
Q 004442 632 LKPQNVLIS---KDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 632 LKp~NILL~---~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDIwSfGvvL~Ell 705 (753)
|||+|||++ .++.+.+||+|||+++...............+||+.|+|||++. ...++.++|||||||++|||+
T Consensus 144 lKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ell 223 (432)
T 3p23_A 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVI 223 (432)
T ss_dssp CSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHH
Confidence 999999995 35556799999999988764432223344567999999999997 456788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHccCccc----ccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFERDANIVKDRKDLF----LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~~~~~~i~~~~~~~----~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++.+||+................. ....++.+.+||.+||+.||++|
T Consensus 224 t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 275 (432)
T 3p23_A 224 SEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKR 275 (432)
T ss_dssp TTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGS
T ss_pred cCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhC
Confidence 9558899877655554443322211 12234568899999999999998
No 137
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.7e-37 Score=334.72 Aligned_cols=243 Identities=14% Similarity=0.164 Sum_probs=183.3
Q ss_pred eecceEEEeEEecccCceEEEEEEeeC------CcEEEEEEeecCCchHHHHHHH--------------HHHHhCCCCce
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE------GRSVAVKRLVKTHHDVALKEIQ--------------NLIASDQHPNI 529 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~------g~~VAVK~l~~~~~~~~~~Ei~--------------~ll~~l~HpNI 529 (753)
...+.|.+.+.||+|+||.||+|.... ++.||||++..... ...+|+. ..+..++|+||
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i 110 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG-PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV 110 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH-HHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch-hHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence 345689999999999999999997654 47899999876542 2222221 13466789999
Q ss_pred eeecccccCC----ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCH
Q 004442 530 VRWYGVESDQ----DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPS 605 (753)
Q Consensus 530 V~L~g~~~~~----~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 605 (753)
+++++++.+. ...+|||| |+ +|+|.+++... ...+++
T Consensus 111 v~~~~~~~~~~~~~~~~~lv~e----------~~-g~~L~~~~~~~----------------------------~~~l~~ 151 (364)
T 3op5_A 111 PKYWGSGLHDKNGKSYRFMIMD----------RF-GSDLQKIYEAN----------------------------AKRFSR 151 (364)
T ss_dssp CCEEEEEEEEETTEEEEEEEEE----------CE-EEEHHHHHHHT----------------------------TSCCCH
T ss_pred CeEEeeeeeccCCcceEEEEEe----------CC-CCCHHHHHHhc----------------------------cCCCCH
Confidence 9999998764 55899999 55 66677666432 245888
Q ss_pred HHHHHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcc----cccCccCCCCccccccc
Q 004442 606 AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC----LTQNATGYGSSGWQAPE 681 (753)
Q Consensus 606 ~~~l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~----~~~~~~~~GT~~Y~APE 681 (753)
.++++|+.||+.||+|||+.+|+||||||+|||++.+....+||+|||+++.+...... ........||+.|+|||
T Consensus 152 ~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 231 (364)
T 3op5_A 152 KTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSID 231 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHH
Confidence 99999999999999999999999999999999998334456999999999876532211 11123445999999999
Q ss_pred cccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHc----cCc------ccccCCCHHHHHHHHHccccC
Q 004442 682 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKD----RKD------LFLVEHIPEAVDLFTRLLDPN 749 (753)
Q Consensus 682 ~l~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~--~~~~~~i~~----~~~------~~~~~~s~el~dLI~~cL~~D 749 (753)
++.+..++.++|||||||++|||+|| .+||.+.. ......... ... .....+++++.++|..||..|
T Consensus 232 ~~~~~~~~~~~Di~slG~~l~el~~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 310 (364)
T 3op5_A 232 AHNGVAPSRRGDLEILGYCMIQWLTG-HLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLD 310 (364)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHHHHHS-CCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCC
T ss_pred HhCCCCCCchhhHHHHHHHHHHHHhC-CCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998 67887431 111111110 000 112567899999999999999
Q ss_pred cCCC
Q 004442 750 PDLR 753 (753)
Q Consensus 750 P~~R 753 (753)
|++|
T Consensus 311 p~~R 314 (364)
T 3op5_A 311 YTEK 314 (364)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 9998
No 138
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.8e-36 Score=337.60 Aligned_cols=196 Identities=26% Similarity=0.426 Sum_probs=154.4
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCC---
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ--- 539 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~--- 539 (753)
..+.++|.+.+.||+|+||.||+|... +|+.||||++..... ....+|+. +++.++|+||+++++++...
T Consensus 22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~ 100 (432)
T 3n9x_A 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT-ILNRLKSDYIIRLYDLIIPDDLL 100 (432)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHH-HHHHCCCTTBCCEEEECCCSCTT
T ss_pred ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHH-HHHHcCCCCcceEEEEEecCCCC
Confidence 445678999999999999999999764 588999999975321 23455655 78999999999999998776
Q ss_pred --ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 540 --~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
+..|+|||+|+++| .+++. ....+++..+..++.||++
T Consensus 101 ~~~~~~lv~e~~~~~L-----------~~~~~-----------------------------~~~~l~~~~~~~i~~qil~ 140 (432)
T 3n9x_A 101 KFDELYIVLEIADSDL-----------KKLFK-----------------------------TPIFLTEEHIKTILYNLLL 140 (432)
T ss_dssp TCCCEEEEEECCSEEH-----------HHHHH-----------------------------SSCCCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEEecCCcCH-----------HHHHh-----------------------------ccCCCCHHHHHHHHHHHHH
Confidence 57999999665544 44432 1245788899999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc-------------------ccCccCCCCcccc
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL-------------------TQNATGYGSSGWQ 678 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~-------------------~~~~~~~GT~~Y~ 678 (753)
||.|||+.+|+||||||+|||++.++ .+||+|||+++......... ......+||+.|+
T Consensus 141 aL~~LH~~givHrDlkp~NILl~~~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 218 (432)
T 3n9x_A 141 GENFIHESGIIHRDLKPANCLLNQDC--SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYR 218 (432)
T ss_dssp HHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEEC-------------------------------CCCCCTTC
T ss_pred HHHHHHHCCCCCCCCCHHHeEECCCC--CEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCcccc
Confidence 99999999999999999999997765 49999999999875432110 1234567999999
Q ss_pred ccccc-cCCCCCchhhHHHHHHHHHHHHhC
Q 004442 679 APEQL-LQGRQTRAIDLFSLGCILFFCITG 707 (753)
Q Consensus 679 APE~l-~~~~~t~ksDIwSfGvvL~EllTG 707 (753)
|||++ ....++.++|||||||++|||++|
T Consensus 219 APE~~~~~~~~~~~~DiwSlG~il~ell~g 248 (432)
T 3n9x_A 219 APELILLQENYTKSIDIWSTGCIFAELLNM 248 (432)
T ss_dssp CHHHHTTCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred CHHHHhcCCCCCcccccchHHHHHHHHHhc
Confidence 99986 556699999999999999999974
No 139
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=332.99 Aligned_cols=242 Identities=16% Similarity=0.155 Sum_probs=181.1
Q ss_pred eecceEEEeEEecccCceEEEEEEee----CCcEEEEEEeecCCch--------------HHHHHHHHHHHhCCCCceee
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHHD--------------VALKEIQNLIASDQHPNIVR 531 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~----~g~~VAVK~l~~~~~~--------------~~~~Ei~~ll~~l~HpNIV~ 531 (753)
...++|.+.+.||+|+||.||+|... .+..||||++...... ...+|+ ..+..++|+||++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~-~~~~~l~h~ni~~ 112 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKW-IERKQLDYLGIPL 112 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHH-HHHHTCSCCCCCC
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHH-HhhccccccCcce
Confidence 34578999999999999999999775 5789999998754321 122333 3567889999999
Q ss_pred ecccccC----CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHH
Q 004442 532 WYGVESD----QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQ 607 (753)
Q Consensus 532 L~g~~~~----~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 607 (753)
+++++.+ .+..++||| |+ +|+|.+++... ..+++.+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e----------~~-~~~L~~~l~~~-----------------------------~~~~~~~ 152 (345)
T 2v62_A 113 FYGSGLTEFKGRSYRFMVME----------RL-GIDLQKISGQN-----------------------------GTFKKST 152 (345)
T ss_dssp EEEEEEEESSSCEEEEEEEE----------CE-EEEHHHHCBGG-----------------------------GBCCHHH
T ss_pred eecccccccCCCcEEEEEEe----------cc-CCCHHHHHHhc-----------------------------CCCCHHH
Confidence 9999887 788999999 66 67777766432 2578889
Q ss_pred HHHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcc----cccCccCCCCccccccccc
Q 004442 608 LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC----LTQNATGYGSSGWQAPEQL 683 (753)
Q Consensus 608 ~l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~----~~~~~~~~GT~~Y~APE~l 683 (753)
+++|+.||+.||+|||+.+|+||||||+|||++.++...+||+|||+++.+...... ........||+.|+|||++
T Consensus 153 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 232 (345)
T 2v62_A 153 VLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAH 232 (345)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHh
Confidence 999999999999999999999999999999998876446999999999877432111 1112345699999999999
Q ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHccCcccc---------cCCCHHHHHHHHHccccCcC
Q 004442 684 LQGRQTRAIDLFSLGCILFFCITGGKHPYGES---FERDANIVKDRKDLFL---------VEHIPEAVDLFTRLLDPNPD 751 (753)
Q Consensus 684 ~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~---~~~~~~~i~~~~~~~~---------~~~s~el~dLI~~cL~~DP~ 751 (753)
.+..++.++|||||||++|||+|| ..||... ...............+ ..+++++.++|.+||..||+
T Consensus 233 ~~~~~~~~~Di~slG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~ 311 (345)
T 2v62_A 233 KGVALSRRSDVEILGYCMLRWLCG-KLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYD 311 (345)
T ss_dssp HTCCCCHHHHHHHHHHHHHHHHHS-SCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTT
T ss_pred cCCCCCchhhHHHHHHHHHHHHhC-CCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcc
Confidence 999999999999999999999998 6788542 1111111111111111 17889999999999999999
Q ss_pred CC
Q 004442 752 LR 753 (753)
Q Consensus 752 ~R 753 (753)
+|
T Consensus 312 ~R 313 (345)
T 2v62_A 312 EK 313 (345)
T ss_dssp CC
T ss_pred cC
Confidence 98
No 140
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.9e-37 Score=330.67 Aligned_cols=236 Identities=22% Similarity=0.302 Sum_probs=179.6
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchH--HHHHHHHHHHhCCCCceeeecccccCCc----eEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV--ALKEIQNLIASDQHPNIVRWYGVESDQD----FVYLS 545 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~--~~~Ei~~ll~~l~HpNIV~L~g~~~~~~----~~~LV 545 (753)
.++|++.+.||+|+||+||+|... ++.||||++....... ..+|+. +++.++||||+++++++.+.. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVY-SLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHH-TSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHH-HHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467899999999999999998654 8999999997654332 223333 567889999999999988643 47999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.++++. ..+++..+++++.|++.||+|||+.
T Consensus 101 ~e----------~~~~g~L~~~l~~------------------------------~~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 101 TA----------FHEKGSLSDFLKA------------------------------NVVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp EE----------CCTTCBHHHHHHH------------------------------CCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred Ee----------cCCCCCHHHHHHh------------------------------cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99 7778888888742 2477888999999999999999999
Q ss_pred ----------CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC-----CCCc
Q 004442 626 ----------GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG-----RQTR 690 (753)
Q Consensus 626 ----------~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~t~ 690 (753)
+|+||||||+|||++.++ .+||+|||+++........ .......||+.|+|||++.+. .++.
T Consensus 141 ~~~l~~~~~~~ivH~Dlkp~Nill~~~~--~~kL~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 217 (322)
T 3soc_A 141 IPGLKDGHKPAISHRDIKSKNVLLKNNL--TACIADFGLALKFEAGKSA-GDTHGQVGTRRYMAPEVLEGAINFQRDAFL 217 (322)
T ss_dssp EEEETTEEECEEECSCCSGGGEEECTTC--CEEECCCTTCEEECTTSCC-CCCTTCCCCGGGCCHHHHTTCCCCCHHHHH
T ss_pred ccccccccCCCEEeCCCChHhEEECCCC--eEEEccCCcccccccccCc-cccccCccCccccCHhhcccccccCcCCCc
Confidence 999999999999997765 4999999999887654321 223345699999999999873 4567
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCh-----------------HHHHHHHHc-cCccccc------CCCHHHHHHHHHcc
Q 004442 691 AIDLFSLGCILFFCITGGKHPYGESF-----------------ERDANIVKD-RKDLFLV------EHIPEAVDLFTRLL 746 (753)
Q Consensus 691 ksDIwSfGvvL~EllTG~~~Pf~~~~-----------------~~~~~~i~~-~~~~~~~------~~s~el~dLI~~cL 746 (753)
++|||||||++|||+|| .+||.... ......+.. ...+... ..++++.+||.+||
T Consensus 218 ~~DiwslG~il~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (322)
T 3soc_A 218 RIDMYAMGLVLWELASR-CTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECW 296 (322)
T ss_dssp HHHHHHHHHHHHHHHTT-BTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHHhC-CCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHc
Confidence 89999999999999998 55665321 111111111 1111111 12346999999999
Q ss_pred ccCcCCC
Q 004442 747 DPNPDLR 753 (753)
Q Consensus 747 ~~DP~~R 753 (753)
+.||++|
T Consensus 297 ~~dP~~R 303 (322)
T 3soc_A 297 DHDAEAR 303 (322)
T ss_dssp CSSGGGS
T ss_pred cCChhhC
Confidence 9999998
No 141
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9.4e-38 Score=335.35 Aligned_cols=245 Identities=23% Similarity=0.318 Sum_probs=188.9
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc---hHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
....++|.+.+.||+|+||.||+|...+|+.||||++..... +...+|+ .+++.++||||++++++|.+.+..++|
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEI-ETLSFCRHPHLVSLIGFCDERNEMILI 113 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHH-HGGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHH-HHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 445677888899999999999999988899999999865432 2334444 477899999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+.+|+|.+++..... ....+++.++++++.|++.||+|||+.
T Consensus 114 ~e----------~~~~~~L~~~l~~~~~-------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~ 158 (321)
T 2qkw_B 114 YK----------YMENGNLKRHLYGSDL-------------------------PTMSMSWEQRLEICIGAARGLHYLHTR 158 (321)
T ss_dssp EE----------CCTTCBTGGGSSSSCC-------------------------CSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE----------cCCCCcHHHHHhccCC-------------------------CccccCHHHHHHHHHHHHHHHHHhcCC
Confidence 99 6677888777643221 123588899999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
+|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 159 ~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell 235 (321)
T 2qkw_B 159 AIIHRDVKSINILLDENF--VPKITDFGISKKGTELDQ-THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235 (321)
T ss_dssp TEECSCCCSTTEEECTTC--CEEECCCTTCEECSSSSC-CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHH
T ss_pred CeecCCCCHHHEEECCCC--CEEEeecccccccccccc-cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHH
Confidence 999999999999997665 499999999987543221 11223345899999999999999999999999999999999
Q ss_pred hCCCCCCCCChHH-HH-------HHHHccC----------cccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFER-DA-------NIVKDRK----------DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~~-~~-------~~i~~~~----------~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|| +.||...... .. ....... .......++++.++|.+||+.||++|
T Consensus 236 ~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 300 (321)
T 2qkw_B 236 CA-RSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDR 300 (321)
T ss_dssp HC-CTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGS
T ss_pred hC-CCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccC
Confidence 99 5566443211 10 0111110 01122345678899999999999998
No 142
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.4e-36 Score=319.90 Aligned_cols=240 Identities=26% Similarity=0.325 Sum_probs=177.2
Q ss_pred ecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
..++|++.+.||+|+||+||++.. .+|+.||||++..... ...+.|+..+++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 457799999999999999999876 4689999999975432 23445555567889999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
||+|+++ |.+++.... .....+++..+++++.|++.||+|||+.
T Consensus 85 ~e~~~~~-----------l~~~l~~~~-------------------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 128 (290)
T 3fme_A 85 MELMDTS-----------LDKFYKQVI-------------------------DKGQTIPEDILGKIAVSIVKALEHLHSK 128 (290)
T ss_dssp EECCSEE-----------HHHHHHHHH-------------------------HTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eehhccc-----------hHHHHHHHH-------------------------hcCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 9966544 444433211 1235688999999999999999999998
Q ss_pred -CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccc----cCCCCCchhhHHHHHHH
Q 004442 626 -GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQL----LQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 626 -~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~t~ksDIwSfGvv 700 (753)
+|+||||||+||+++.++. +||+|||+++...... ......||+.|+|||++ .+..++.++|||||||+
T Consensus 129 ~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 202 (290)
T 3fme_A 129 LSVIHRDVKPSNVLINALGQ--VKMCDFGISGYLVDDV----AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 202 (290)
T ss_dssp SCCCCCCCSGGGCEECTTCC--EEBCCC-------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHH
T ss_pred CCeecCCCCHHHEEECCCCC--EEEeecCCcccccccc----cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHH
Confidence 9999999999999977654 9999999998765432 12234589999999996 55678999999999999
Q ss_pred HHHHHhCCCCCCCCC--hHH-HHHHHHccCccc-ccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGES--FER-DANIVKDRKDLF-LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~--~~~-~~~~i~~~~~~~-~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||+|| ..||... ... ............ ...+++++.++|.+||+.||++|
T Consensus 203 l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 258 (290)
T 3fme_A 203 MIELAIL-RFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKER 258 (290)
T ss_dssp HHHHHHT-SCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHC-CCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhC
Confidence 9999999 6788642 222 222233333322 34678999999999999999998
No 143
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.4e-36 Score=321.59 Aligned_cols=239 Identities=26% Similarity=0.398 Sum_probs=190.1
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC---chHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
..+.++|.+.+.||+|+||.||++... +|+.||||.+.... .....+|+. +++.++||||+++++++.+.+..++
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIA-VLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHH-HHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHH-HHHhCCCCCeeehhhhcccCCEEEE
Confidence 455678999999999999999998765 69999999997543 223344554 7889999999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++.. ...+++..+..++.|++.||.|||+
T Consensus 84 v~e----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~ 124 (304)
T 2jam_A 84 VMQ----------LVSGGELFDRILE-----------------------------RGVYTEKDASLVIQQVLSAVKYLHE 124 (304)
T ss_dssp EEC----------CCCSCBHHHHHHH-----------------------------HSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE----------cCCCccHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 6667777777643 2357788899999999999999999
Q ss_pred CCccccCCCCCcEEEec-CCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~-d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
.+|+||||||+||++.. +....+||+|||+++..... ......||+.|+|||++.+..++.++|||||||++||
T Consensus 125 ~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 199 (304)
T 2jam_A 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYI 199 (304)
T ss_dssp TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHH
T ss_pred CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHH
Confidence 99999999999999932 22345999999999764322 1223358999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCh-HHHHHHHHccCc----ccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGESF-ERDANIVKDRKD----LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~~-~~~~~~i~~~~~----~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++| .+||.... ......+..... .....+++++.+||.+||..||++|
T Consensus 200 l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 253 (304)
T 2jam_A 200 LLCG-YPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNER 253 (304)
T ss_dssp HHHS-SCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTS
T ss_pred HHHC-CCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHC
Confidence 9998 56776543 333344444332 2335678999999999999999998
No 144
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.9e-37 Score=351.73 Aligned_cols=241 Identities=24% Similarity=0.364 Sum_probs=195.5
Q ss_pred eecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
...+.|.+.+.||+|+||.||++...++..||||+++... .+.+.+|+. +++.++|+||++++++|.+ +..+||||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ-VMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHH-HHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3456788999999999999999988888899999997643 234455554 8899999999999999876 67899999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+.+|+|.++|+... ...+++.++++|+.||+.||+|||+++|
T Consensus 342 ----------~~~~gsL~~~l~~~~---------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~i 384 (535)
T 2h8h_A 342 ----------YMSKGSLLDFLKGET---------------------------GKYLRLPQLVDMAAQIASGMAYVERMNY 384 (535)
T ss_dssp ----------CCTTEEHHHHHSHHH---------------------------HTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ----------hhcCCcHHHHHhhcC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 777888988886431 2357888999999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG 707 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG 707 (753)
+||||||+|||++.++ .+||+|||+++..... .........++..|+|||++.+..++.++|||||||+||||+|+
T Consensus 385 vHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~ 460 (535)
T 2h8h_A 385 VHRDLRAANILVGENL--VCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 460 (535)
T ss_dssp CCSCCSGGGEEECGGG--CEEECCTTSTTTCCCH--HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred eCCCCCHhhEEEcCCC--cEEEcccccceecCCC--ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999997665 5999999999876432 11122233468899999999999999999999999999999994
Q ss_pred CCCCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 708 GKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 708 ~~~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+..||.+... .....+... ....+..+++++.+||.+||+.||++|
T Consensus 461 g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 508 (535)
T 2h8h_A 461 GRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 508 (535)
T ss_dssp TCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence 4788876543 333344333 344567889999999999999999998
No 145
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.2e-36 Score=321.14 Aligned_cols=242 Identities=20% Similarity=0.266 Sum_probs=181.2
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-hHHHHHHHHHHHhCCCCceeeecccc-cCCceEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVE-SDQDFVYLS 545 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~L~g~~-~~~~~~~LV 545 (753)
..++++|.+.+.||+|+||.||++.. .+++.||||++..... ....+|.. ++..++|+|++..++++ .+.+..++|
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESK-IYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ------CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHH-HHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHH-HHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 34567899999999999999999975 5689999998765433 34445554 67888888777666665 567788999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+ +|+|.+++... ...+++..++.++.||+.||.|||+.
T Consensus 84 ~e----------~~-~~~L~~~~~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~LH~~ 124 (296)
T 4hgt_A 84 ME----------LL-GPSLEDLFNFC----------------------------SRKFSLKTVLLLADQMISRIEYIHSK 124 (296)
T ss_dssp EE----------CC-CCBHHHHHHHT----------------------------TSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE----------cc-CCCHHHHHHHh----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 54 56666655421 24578899999999999999999999
Q ss_pred CccccCCCCCcEEE---ecCCCCeEEEEeccCceeccCCCccc----ccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 626 GLIHRDLKPQNVLI---SKDKSFCAKLSDMGISKRLQGDMSCL----TQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 626 ~IiHrDLKp~NILL---~~d~~~~~KLsDFGla~~~~~~~~~~----~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
+|+||||||+|||+ +.++ .+||+|||+++......... .......||+.|+|||.+.+..++.++||||||
T Consensus 125 ~ivH~Dlkp~NIl~~~~~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 202 (296)
T 4hgt_A 125 NFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLG 202 (296)
T ss_dssp TEECSCCSGGGEEECCGGGTT--CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHH
T ss_pred CeecCCCCHHHeeeeccCCCC--eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHH
Confidence 99999999999999 5554 49999999999876532211 122345689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCChH----HHHHHHHccC-----cccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGESFE----RDANIVKDRK-----DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~~----~~~~~i~~~~-----~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||++| .+||..... .....+.... ......+++++.++|.+||+.||++|
T Consensus 203 ~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 265 (296)
T 4hgt_A 203 YVLMYFNLG-SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDK 265 (296)
T ss_dssp HHHHHHHHS-SCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCC
T ss_pred HHHHHHhcC-CCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCC
Confidence 999999998 668765311 1112211111 12236678999999999999999998
No 146
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-36 Score=327.58 Aligned_cols=255 Identities=23% Similarity=0.317 Sum_probs=193.8
Q ss_pred eecceEEEeEEecccCceEEEEEEeeC------CcEEEEEEeecCCc----hHHHHHHHHHHHhC-CCCceeeecccccC
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE------GRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESD 538 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~------g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~ 538 (753)
...+.|.+.+.||+|+||.||++.... ++.||||.+..... +...+|+. +++.+ +||||++++++|.+
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK-IMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEEECS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHH-HHHhhcCCCCeeeEEEEEec
Confidence 345678999999999999999987542 35899999976532 23345554 66777 89999999999999
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++||| |+++|+|.+++......... .....+....+++..+++++.||+.|
T Consensus 122 ~~~~~lv~e----------~~~~g~L~~~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~qi~~~ 176 (333)
T 2i1m_A 122 GGPVLVITE----------YCCYGDLLNFLRRKSRVLET---------------DPAFAIANSTASTRDLLHFSSQVAQG 176 (333)
T ss_dssp SSSCEEEEE----------CCTTEEHHHHHHHHHHHHSC---------------C-------CCCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEe----------cCCCCcHHHHHHHhcccccc---------------cccccccccccCHHHHHHHHHHHHHH
Confidence 999999999 66777888887654321100 00011224568899999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
|+|||+.+|+||||||+|||++.++ .+||+|||+++........ .......||+.|+|||++.+..++.++||||||
T Consensus 177 l~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 253 (333)
T 2i1m_A 177 MAFLASKNCIHRDVAARNVLLTNGH--VAKIGDFGLARDIMNDSNY-IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253 (333)
T ss_dssp HHHHHHTTEECSCCSGGGCEEEGGG--EEEBCCCGGGCCGGGCTTS-EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred HHHHhcCCcccCCcccceEEECCCC--eEEECccccccccccccce-eecCCCCCCccccCHHHhccCCCChHHHHHHHH
Confidence 9999999999999999999997765 5999999999876443221 122334468899999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCChH--HHHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGESFE--RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~~--~~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||+|++.+||..... ........ .....+...++++.++|.+||+.||++|
T Consensus 254 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 311 (333)
T 2i1m_A 254 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR 311 (333)
T ss_dssp HHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhC
Confidence 9999999954788876432 22223332 2334556678999999999999999998
No 147
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=332.62 Aligned_cols=232 Identities=24% Similarity=0.288 Sum_probs=189.5
Q ss_pred eecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC-----------chHHHHHHHHHHHhCCCCceeeeccccc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----------HDVALKEIQNLIASDQHPNIVRWYGVES 537 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~-----------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~ 537 (753)
.+.++|.+.+.||+|+||.||++.. .+++.||||++.... .....+|+. +++.++||||+++++++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIA-ILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHH-HHTTCCCTTBCCEEEEEE
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHH-HHHhCCCCCEeeEEEEEe
Confidence 4567899999999999999999975 568999999997542 123344555 778999999999999999
Q ss_pred CCceEEEEEccccCChhhHHHHhcC-ChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHH
Q 004442 538 DQDFVYLSLERCTCSLNDLIYVLSG-SFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (753)
Q Consensus 538 ~~~~~~LV~E~c~~~L~~liy~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa 616 (753)
+.+..++||| |+..| +|.+++.. ...+++..++.|+.||+
T Consensus 100 ~~~~~~lv~e----------~~~~g~~l~~~~~~-----------------------------~~~l~~~~~~~i~~qi~ 140 (335)
T 3dls_A 100 NQGFFQLVME----------KHGSGLDLFAFIDR-----------------------------HPRLDEPLASYIFRQLV 140 (335)
T ss_dssp CSSEEEEEEE----------CCTTSCBHHHHHHT-----------------------------CCCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEE----------eCCCCccHHHHHHh-----------------------------cCCCCHHHHHHHHHHHH
Confidence 9999999999 44444 67666632 23578889999999999
Q ss_pred HHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-CchhhHH
Q 004442 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLF 695 (753)
Q Consensus 617 ~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDIw 695 (753)
.||+|||+.+|+||||||+|||++.++. +||+|||+++...... .....+||+.|+|||++.+..+ +.++|||
T Consensus 141 ~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw 214 (335)
T 3dls_A 141 SAVGYLRLKDIIHRDIKDENIVIAEDFT--IKLIDFGSAAYLERGK----LFYTFCGTIEYCAPEVLMGNPYRGPELEMW 214 (335)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTSC--EEECCCTTCEECCTTC----CBCEECSCGGGCCHHHHTTCCBCSHHHHHH
T ss_pred HHHHHHHhCCeEEeccCHHHEEEcCCCc--EEEeecccceECCCCC----ceeccCCCccccChhhhcCCCCCCCcccch
Confidence 9999999999999999999999977654 9999999998775432 1233568999999999988887 8999999
Q ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 696 SLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 696 SfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||||++|||++| ..||....+. .......+..+++++.+||.+||+.||++|
T Consensus 215 slG~il~el~~g-~~pf~~~~~~-----~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 266 (335)
T 3dls_A 215 SLGVTLYTLVFE-ENPFCELEET-----VEAAIHPPYLVSKELMSLVSGLLQPVPERR 266 (335)
T ss_dssp HHHHHHHHHHHS-SCSCSSGGGG-----TTTCCCCSSCCCHHHHHHHHHHTCSSGGGS
T ss_pred hHHHHHHHHHhC-CCchhhHHHH-----HhhccCCCcccCHHHHHHHHHHccCChhhC
Confidence 999999999998 6788654321 123334456689999999999999999998
No 148
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.6e-36 Score=326.63 Aligned_cols=240 Identities=24% Similarity=0.347 Sum_probs=192.5
Q ss_pred cceEEEeEEecccCceEEEEEE-----eeCCcEEEEEEeecCCch---HHHHHHHHHHHhCCCCceeeeccccc--CCce
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVES--DQDF 541 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~-----~~~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~L~g~~~--~~~~ 541 (753)
.++|++.+.||+|+||.||++. ..+++.||||++...... ...+|+ .+++.++|+||+++++++. +.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREI-QILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHH-HHHHhcCCCceeEEEEEEecCCCce
Confidence 4678999999999999999987 346899999999765432 234454 4889999999999999876 4667
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+++|+|.+++.... ..+++.++++++.|++.||+|
T Consensus 101 ~~lv~e----------~~~~~~L~~~l~~~~----------------------------~~~~~~~~~~i~~qi~~al~~ 142 (327)
T 3lxl_A 101 LRLVME----------YLPSGCLRDFLQRHR----------------------------ARLDASRLLLYSSQICKGMEY 142 (327)
T ss_dssp EEEEEE----------CCTTCBHHHHHHHHG----------------------------GGCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEe----------ecCCCCHHHHHHhcc----------------------------cCCCHHHHHHHHHHHHHHHHH
Confidence 899999 677788888875421 247888999999999999999
Q ss_pred hhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL 701 (753)
||+.+|+||||||+|||++.++. +||+|||+++................||..|+|||++.+..++.++|||||||++
T Consensus 143 lH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 220 (327)
T 3lxl_A 143 LGSRRCVHRDLAARNILVESEAH--VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 220 (327)
T ss_dssp HHHTTEECSCCSGGGEEEEETTE--EEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred HHhCCccCCCCChhhEEECCCCC--EEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHH
Confidence 99999999999999999987765 9999999999876544333344455689999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCChHH----------------HHHHH-HccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGESFER----------------DANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~~~----------------~~~~i-~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++| ..||...... ....+ .......+..+++++.+||.+||+.||++|
T Consensus 221 ~~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 288 (327)
T 3lxl_A 221 YELFTY-CDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDR 288 (327)
T ss_dssp HHHHTT-TCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHhC-CCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhC
Confidence 999999 4565433221 11111 223345567789999999999999999998
No 149
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3e-36 Score=327.66 Aligned_cols=239 Identities=24% Similarity=0.344 Sum_probs=182.5
Q ss_pred cceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccC-------
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESD------- 538 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~------- 538 (753)
..+|.+.+.||+|+||.||++.. .+|+.||||++.... .....+|+. +++.++|+||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHH-HHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHH-HHHhccCCCcccHhheeecccccccc
Confidence 36789999999999999999976 568999999985432 234556665 7799999999999999876
Q ss_pred -CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 539 -QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 539 -~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
.+..++|||+|.++|.+.+ .. ....+++.+++.++.|++.
T Consensus 95 ~~~~~~lv~e~~~~~l~~~l-----------~~----------------------------~~~~~~~~~~~~i~~qi~~ 135 (351)
T 3mi9_A 95 CKGSIYLVFDFCEHDLAGLL-----------SN----------------------------VLVKFTLSEIKRVMQMLLN 135 (351)
T ss_dssp --CEEEEEEECCSEEHHHHH-----------HC----------------------------TTSCCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEeccCCCHHHHH-----------hh----------------------------ccCCCCHHHHHHHHHHHHH
Confidence 4568999997765544333 21 1235788899999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCc-ccccCccCCCCccccccccccCC-CCCchhhHH
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS-CLTQNATGYGSSGWQAPEQLLQG-RQTRAIDLF 695 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~-~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDIw 695 (753)
||+|||+.+|+||||||+|||++.++. +||+|||+++....... .........||+.|+|||++.+. .++.++|||
T Consensus 136 ~l~~LH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw 213 (351)
T 3mi9_A 136 GLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLW 213 (351)
T ss_dssp HHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHH
T ss_pred HHHHHHHCCeeCCCCCHHHEEEcCCCC--EEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHH
Confidence 999999999999999999999977764 99999999987753221 12223445689999999998764 579999999
Q ss_pred HHHHHHHHHHhCCCCCCCCChHH-HHHHHHccCccccc--------------------------------CCCHHHHHHH
Q 004442 696 SLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFLV--------------------------------EHIPEAVDLF 742 (753)
Q Consensus 696 SfGvvL~EllTG~~~Pf~~~~~~-~~~~i~~~~~~~~~--------------------------------~~s~el~dLI 742 (753)
||||++|||+|| .+||...... ....+.......+. ..++++.+||
T Consensus 214 slG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 292 (351)
T 3mi9_A 214 GAGCIMAEMWTR-SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI 292 (351)
T ss_dssp HHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHH
Confidence 999999999998 6677665433 22222211111000 0267899999
Q ss_pred HHccccCcCCC
Q 004442 743 TRLLDPNPDLR 753 (753)
Q Consensus 743 ~~cL~~DP~~R 753 (753)
.+||..||++|
T Consensus 293 ~~~L~~dP~~R 303 (351)
T 3mi9_A 293 DKLLVLDPAQR 303 (351)
T ss_dssp HHHSCSSGGGS
T ss_pred HHHhcCChhhC
Confidence 99999999998
No 150
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=320.95 Aligned_cols=235 Identities=25% Similarity=0.389 Sum_probs=179.6
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCch-----HHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~-----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
++|.+.+.||+|+||+||++... +|+.||||++...... ...+|+ .+++.++||||+++++++.+.+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREI-RMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHH-HHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHH-HHHHhCCCCCccchhheeecCCeEEEEE
Confidence 57899999999999999999775 4899999998654422 233444 4789999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+.+|+|.+++.. ...+++..+..++.|++.||+|||+.+
T Consensus 82 e----------~~~~~~l~~~~~~-----------------------------~~~~~~~~~~~i~~~l~~~l~~lH~~~ 122 (311)
T 4agu_A 82 E----------YCDHTVLHELDRY-----------------------------QRGVPEHLVKSITWQTLQAVNFCHKHN 122 (311)
T ss_dssp E----------CCSEEHHHHHHHT-----------------------------SSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred E----------eCCCchHHHHHhh-----------------------------hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9 5555666655432 245788899999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHHHHHHHHHHHH
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIwSfGvvL~Ell 705 (753)
|+||||||+||+++.++. +||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 123 ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 197 (311)
T 4agu_A 123 CIHRDVKPENILITKHSV--IKLCDFGFARLLTGPSD---YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197 (311)
T ss_dssp EECCCCSGGGEEECTTSC--EEECCCTTCEECC---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHH
T ss_pred CcCCCCChhhEEEcCCCC--EEEeeCCCchhccCccc---ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence 999999999999977754 99999999987653321 2234468999999999976 56899999999999999999
Q ss_pred hCCCCCCCCChHHH-HHHHHcc---------------------Cc----------ccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFERD-ANIVKDR---------------------KD----------LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~~~-~~~i~~~---------------------~~----------~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+| .+||....... ...+... .. .....+++++.+||.+||+.||++|
T Consensus 198 ~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 276 (311)
T 4agu_A 198 SG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTER 276 (311)
T ss_dssp HS-SCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTS
T ss_pred hC-CCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhc
Confidence 98 67776653322 2211110 00 0113578899999999999999998
No 151
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.4e-36 Score=342.71 Aligned_cols=238 Identities=25% Similarity=0.384 Sum_probs=191.1
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecC-----CchHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~-----~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
.+.++|.+.+.||+|+||+||++... +++.||||++... ......+|+. +++.++||||+++++++.+.+..+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~ 97 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE-LLKKLDHPNIMKLFEILEDSSSFY 97 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHH-HHHhCCCCCcCeEEEEEEcCCEEE
Confidence 45578999999999999999999765 6899999998532 2334455655 789999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++.. ...+++..+..++.||+.||.|||
T Consensus 98 lv~e----------~~~~~~L~~~~~~-----------------------------~~~~~~~~~~~i~~qi~~al~~lH 138 (486)
T 3mwu_A 98 IVGE----------LYTGGELFDEIIK-----------------------------RKRFSEHDAARIIKQVFSGITYMH 138 (486)
T ss_dssp EEEC----------CCCSCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------cCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 6667778776643 245788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecC-CCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d-~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
+.+|+||||||+|||++.+ ....+||+|||+++..... ......+||+.|+|||++.+ .++.++|||||||++|
T Consensus 139 ~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~ 213 (486)
T 3mwu_A 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN----TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILY 213 (486)
T ss_dssp HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHH
T ss_pred HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC----CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHH
Confidence 9999999999999999643 2346999999999876543 22334569999999999875 5999999999999999
Q ss_pred HHHhCCCCCCCCC-hHHHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGES-FERDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~-~~~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|++| .+||.+. .......+...... ....+++++.+||++||++||++|
T Consensus 214 ~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R 268 (486)
T 3mwu_A 214 ILLSG-TPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268 (486)
T ss_dssp HHHHS-SCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhC
Confidence 99999 5666554 34444444444332 235678999999999999999998
No 152
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.6e-36 Score=319.37 Aligned_cols=239 Identities=24% Similarity=0.348 Sum_probs=187.2
Q ss_pred cceEEEeE-EecccCceEEEEEEee---CCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 472 GKLVVFNK-EIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 472 ~~~~~i~~-~IG~G~fG~Vyka~~~---~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
.++|.+.+ .||+|+||.||++... .++.||||++..... ...+..+..+++.++||||+++++++ +.+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 9999999999998543 478999999975431 12233333478999999999999999 567789
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++.. ...+++..++.++.|++.||+|||
T Consensus 94 lv~e----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~LH 134 (291)
T 1xbb_A 94 LVME----------MAELGPLNKYLQQ-----------------------------NRHVKDKNIIELVHQVSMGMKYLE 134 (291)
T ss_dssp EEEE----------CCTTEEHHHHHHH-----------------------------CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------eCCCCCHHHHHHh-----------------------------CcCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 6667778777743 234778889999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+|+||||||+||+++.++ .+||+|||+++................+|+.|+|||.+.+..++.++||||||+++||
T Consensus 135 ~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 212 (291)
T 1xbb_A 135 ESNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212 (291)
T ss_dssp HTTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred hCCeEcCCCCcceEEEeCCC--cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHH
Confidence 99999999999999998776 4999999999887654333333334457899999999998889999999999999999
Q ss_pred HHh-CCCCCCCCChHHH-HHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CIT-GGKHPYGESFERD-ANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llT-G~~~Pf~~~~~~~-~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+| | ..||....... ...+... ....+..+++++.++|.+||+.||++|
T Consensus 213 l~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 264 (291)
T 1xbb_A 213 AFSYG-QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 264 (291)
T ss_dssp HHTTT-CCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred HHhcC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 999 6 67887654333 3333333 345567789999999999999999998
No 153
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.5e-36 Score=319.84 Aligned_cols=242 Identities=26% Similarity=0.420 Sum_probs=178.7
Q ss_pred cceecceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCCc---hHHHHHHHHHHHhCCCCceeeecccc-------
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVE------- 536 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~L~g~~------- 536 (753)
+..+.++|.+.+.||+|+||.||++.... |+.||||++..... +...+|+. +++.++||||+++++++
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~ 84 (320)
T 2i6l_A 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIK-IIRRLDHDNIVKVFEILGPSGSQL 84 (320)
T ss_dssp CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHH-HHHTCCCTTBCCEEEEECTTSCBC
T ss_pred cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHH-HHHhcCCCCeeEEEEecccccccc
Confidence 45677889999999999999999997764 89999999875542 23345554 78999999999999876
Q ss_pred -------cCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHH
Q 004442 537 -------SDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (753)
Q Consensus 537 -------~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 609 (753)
.+.+..++|||+|.+ +|.+++. ...+++..++
T Consensus 85 ~~~~~~~~~~~~~~lv~e~~~~-----------~L~~~~~------------------------------~~~~~~~~~~ 123 (320)
T 2i6l_A 85 TDDVGSLTELNSVYIVQEYMET-----------DLANVLE------------------------------QGPLLEEHAR 123 (320)
T ss_dssp CC----CCSCSEEEEEEECCSE-----------EHHHHHT------------------------------TCCCCHHHHH
T ss_pred ccccccccccCceeEEeeccCC-----------CHHHHhh------------------------------cCCccHHHHH
Confidence 345788999995554 4444442 1346778889
Q ss_pred HHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCC
Q 004442 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQ 688 (753)
Q Consensus 610 ~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~ 688 (753)
.++.|++.||+|||+.+|+||||||+||+++.++ ..+||+|||+++................+|..|+|||.+.+ ..+
T Consensus 124 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 202 (320)
T 2i6l_A 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTED-LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNY 202 (320)
T ss_dssp HHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCC
T ss_pred HHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccC
Confidence 9999999999999999999999999999997443 46999999999876543222233344457999999998876 678
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHccC------------------------------cccccCCCHH
Q 004442 689 TRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRK------------------------------DLFLVEHIPE 737 (753)
Q Consensus 689 t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~-~~~~i~~~~------------------------------~~~~~~~s~e 737 (753)
+.++|||||||++|||+|| ++||...... ....+.... ......++++
T Consensus 203 ~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (320)
T 2i6l_A 203 TKAIDMWAAGCIFAEMLTG-KTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISRE 281 (320)
T ss_dssp CHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHH
T ss_pred CchhhhHhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHH
Confidence 9999999999999999998 6677665332 222211110 0122457899
Q ss_pred HHHHHHHccccCcCCC
Q 004442 738 AVDLFTRLLDPNPDLR 753 (753)
Q Consensus 738 l~dLI~~cL~~DP~~R 753 (753)
+.+||++||+.||++|
T Consensus 282 ~~~li~~~L~~dP~~R 297 (320)
T 2i6l_A 282 AVDFLEQILTFSPMDR 297 (320)
T ss_dssp HHHHHHTTSCSSGGGS
T ss_pred HHHHHHHHcCCCcccc
Confidence 9999999999999998
No 154
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.2e-38 Score=336.38 Aligned_cols=244 Identities=23% Similarity=0.302 Sum_probs=189.6
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
....++|.+.+.||+|+||.||++...+|+.||||++..... ....+|+. +++.++||||++++++|.+.+..++
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~l 104 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLLRLRGFCMTPTERLL 104 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHH-GGGTCCCTTBCCCCEEECCSSCCEE
T ss_pred HHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHH-HHHhccCCCccceEEEEecCCceEE
Confidence 344566778889999999999999888899999999965432 23445554 7789999999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.++++.... ....+++..++.|+.|++.||+|||+
T Consensus 105 v~e----------~~~~~~L~~~l~~~~~-------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~ 149 (326)
T 3uim_A 105 VYP----------YMANGSVASCLRERPE-------------------------SQPPLDWPKRQRIALGSARGLAYLHD 149 (326)
T ss_dssp EEE----------CCTTCBHHHHHHCCST-------------------------TCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE----------eccCCCHHHHHHhccc-------------------------cCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 7778888888865321 23458899999999999999999999
Q ss_pred C---CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHH
Q 004442 625 I---GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 625 ~---~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL 701 (753)
. +|+||||||+|||++.++. +||+|||+++....... .......||+.|+|||++.+..++.++|||||||++
T Consensus 150 ~~~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 225 (326)
T 3uim_A 150 HCDPKIIHRDVKAANILLDEEFE--AVVGDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVML 225 (326)
T ss_dssp SSSSCEECCCCSGGGEEECTTCC--EEECCCSSCEECCSSSS--CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHH
T ss_pred CCCCCeEeCCCchhhEEECCCCC--EEeccCccccccCcccc--cccccccCCcCccCHHHhccCCCCccccchhHHHHH
Confidence 9 9999999999999977654 99999999987754322 222344589999999999988999999999999999
Q ss_pred HHHHhCCCCCCCCCh------HHHHHHHHcc--------------CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGESF------ERDANIVKDR--------------KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~------~~~~~~i~~~--------------~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||+|| .+||+... .......... ........++++.++|.+||+.||++|
T Consensus 226 ~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 296 (326)
T 3uim_A 226 LELITG-QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 296 (326)
T ss_dssp HHHHHC-CCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGS
T ss_pred HHHHhC-CCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccC
Confidence 999998 67874211 0111111110 001122234679999999999999998
No 155
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-36 Score=323.53 Aligned_cols=237 Identities=23% Similarity=0.318 Sum_probs=180.2
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc------hHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
.++|.+.+.||+|+||.||++... +++.||||++..... +...+|+ .+++.++||||+++++++.+++..++
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREA-RTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHH-HHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHH-HHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 467999999999999999999765 689999999965421 2233444 47789999999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++... ..+++.+++.++.|++.||+|||+
T Consensus 112 v~e----------~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~i~~qi~~~l~~lH~ 152 (309)
T 2h34_A 112 DMR----------LINGVDLAAMLRRQ-----------------------------GPLAPPRAVAIVRQIGSALDAAHA 152 (309)
T ss_dssp EEE----------CCCCEEHHHHHHHH-----------------------------CSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE----------ecCCCCHHHHHHhc-----------------------------CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 66667777776432 357888999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~El 704 (753)
.+|+||||||+||+++.++. +||+|||++....... ........||+.|+|||++.+..++.++||||||+++|||
T Consensus 153 ~~i~H~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 228 (309)
T 2h34_A 153 AGATHRDVKPENILVSADDF--AYLVDFGIASATTDEK--LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYEC 228 (309)
T ss_dssp TTCCCSCCCGGGEEECTTSC--EEECSCCC------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHH
T ss_pred CcCCcCCCChHHEEEcCCCC--EEEecCccCccccccc--cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHH
Confidence 99999999999999977765 9999999998765432 1222344689999999999999999999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHccCc----ccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 ITGGKHPYGESFERDANIVKDRKD----LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lTG~~~Pf~~~~~~~~~~i~~~~~----~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++| ..||................ ..+..+++++.++|.+||+.||++|
T Consensus 229 ~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 280 (309)
T 2h34_A 229 LTG-SPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDR 280 (309)
T ss_dssp HHS-SCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGS
T ss_pred HHC-CCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHH
Confidence 998 67887765543333222221 2345678999999999999999998
No 156
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.6e-36 Score=337.80 Aligned_cols=239 Identities=26% Similarity=0.335 Sum_probs=181.9
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccC------CceEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD------QDFVY 543 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~------~~~~~ 543 (753)
....|.+.+.||+|+||.||+|... +|+.||||++.... ....+|+. +++.++|+|||+++++|.. ...++
T Consensus 52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~E~~-il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQ-IMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHH-HHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-hhHHHHHH-HHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 3457899999999999999999775 59999999986543 22234555 7899999999999998743 23468
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+|||||++++.+++ .... .....+++..+..++.||++||+|||
T Consensus 130 lv~e~~~~~l~~~~-----------~~~~-------------------------~~~~~l~~~~~~~~~~qi~~aL~~LH 173 (420)
T 1j1b_A 130 LVLDYVPETVYRVA-----------RHYS-------------------------RAKQTLPVIYVKLYMYQLFRSLAYIH 173 (420)
T ss_dssp EEEECCCEEHHHHH-----------HHHH-------------------------HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eehhcccccHHHHH-----------HHHh-------------------------hccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997765443332 2111 12356888999999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC-CCCchhhHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILF 702 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDIwSfGvvL~ 702 (753)
+.+|+||||||+|||++.++ ..+||+|||+++...... .....+||+.|+|||++.+. .++.++|||||||++|
T Consensus 174 ~~~ivHrDlkp~NILl~~~~-~~~kl~DFG~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ 248 (420)
T 1j1b_A 174 SFGICHRDIKPQNLLLDPDT-AVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 248 (420)
T ss_dssp TTTEECSCCSGGGEEEETTT-TEEEECCCTTCEECCTTC----CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred HCCccccCCChhhEEEeCCC-CeEEeccchhhhhcccCC----CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHH
Confidence 99999999999999998654 358999999999765332 22345689999999999765 6899999999999999
Q ss_pred HHHhCCCCCCCCChH-HHHHHHHcc-----------------Cc------------ccccCCCHHHHHHHHHccccCcCC
Q 004442 703 FCITGGKHPYGESFE-RDANIVKDR-----------------KD------------LFLVEHIPEAVDLFTRLLDPNPDL 752 (753)
Q Consensus 703 EllTG~~~Pf~~~~~-~~~~~i~~~-----------------~~------------~~~~~~s~el~dLI~~cL~~DP~~ 752 (753)
||++| ++||.+... .....+... .. .+....++++.+||++||.+||++
T Consensus 249 ell~G-~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~ 327 (420)
T 1j1b_A 249 ELLLG-QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327 (420)
T ss_dssp HHHHS-SCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGG
T ss_pred HHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhH
Confidence 99998 667765432 222111110 00 023456789999999999999999
Q ss_pred C
Q 004442 753 R 753 (753)
Q Consensus 753 R 753 (753)
|
T Consensus 328 R 328 (420)
T 1j1b_A 328 R 328 (420)
T ss_dssp S
T ss_pred C
Confidence 8
No 157
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.8e-36 Score=317.79 Aligned_cols=236 Identities=23% Similarity=0.369 Sum_probs=190.4
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccC---------
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD--------- 538 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~--------- 538 (753)
..+..+|.+.+.||+|+||.||++... +|+.||||++.... +...+|+. ++..++||||+++++++..
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-EKAEREVK-ALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-GGGHHHHH-HHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-HHHHHHHH-HHHhCCCCCEEEEeeeEeccccCccccc
Confidence 456678999999999999999999775 69999999997654 34455665 7789999999999998754
Q ss_pred -------CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHH
Q 004442 539 -------QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKV 611 (753)
Q Consensus 539 -------~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~I 611 (753)
....++||| |+.+|+|.+++.... ...+++..++++
T Consensus 85 ~~~~~~~~~~~~lv~e----------~~~~~~L~~~l~~~~---------------------------~~~~~~~~~~~i 127 (284)
T 2a19_B 85 KNSSRSKTKCLFIQME----------FCDKGTLEQWIEKRR---------------------------GEKLDKVLALEL 127 (284)
T ss_dssp ----CCEEEEEEEEEC----------CCCSCBHHHHHHHGG---------------------------GSCCCHHHHHHH
T ss_pred ccccccCcceEEEEEe----------ccCCCCHHHHHhhcc---------------------------CCCCCHHHHHHH
Confidence 455899999 667788888875431 245788899999
Q ss_pred HHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCch
Q 004442 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRA 691 (753)
Q Consensus 612 a~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~k 691 (753)
+.|++.||.|||+.+|+||||||+||+++.++ .+||+|||+++...... ......||+.|+|||++.+..++.+
T Consensus 128 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~ 201 (284)
T 2a19_B 128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDG----KRTRSKGTLRYMSPEQISSQDYGKE 201 (284)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EEEECCCTTCEESSCCS----CCCCCCSCCTTSCHHHHHCSCCCTH
T ss_pred HHHHHHHHHHHHhCCeeeccCCHHHEEEcCCC--CEEECcchhheeccccc----cccccCCcccccChhhhccCCCcch
Confidence 99999999999999999999999999998775 49999999998775432 1233458999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 692 IDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 692 sDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+||||||+++|||++|.. |+.... ....... ....+..+++++.++|.+||+.||++|
T Consensus 202 ~Di~slG~il~~l~~~~~-~~~~~~-~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R 259 (284)
T 2a19_B 202 VDLYALGLILAELLHVCD-TAFETS-KFFTDLR--DGIISDIFDKKEKTLLQKLLSKKPEDR 259 (284)
T ss_dssp HHHHHHHHHHHHHHSCCS-SHHHHH-HHHHHHH--TTCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred hhhHHHHHHHHHHHhcCC-cchhHH-HHHHHhh--cccccccCCHHHHHHHHHHccCChhhC
Confidence 999999999999999954 443221 1112222 223456788999999999999999998
No 158
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=319.34 Aligned_cols=240 Identities=23% Similarity=0.374 Sum_probs=187.0
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
+...+.|.+.+.||+|+||.||++... +|+.||||.+..... ....+|+. ++..++||||+++++++.+.+..++||
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEIS-IMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHH-HHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHH-HHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 345577999999999999999999765 489999999976543 34455554 789999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+.+|+|.+++... ...+++..++.++.|++.||.|||+.+
T Consensus 104 e----------~~~~~~L~~~~~~~----------------------------~~~~~~~~~~~i~~~i~~~l~~lH~~~ 145 (314)
T 3com_A 104 E----------YCGAGSVSDIIRLR----------------------------NKTLTEDEIATILQSTLKGLEYLHFMR 145 (314)
T ss_dssp E----------CCTTEEHHHHHHHH----------------------------TCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred e----------cCCCCCHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 55666777766421 245788899999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
|+||||||+||+++.++. +||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++
T Consensus 146 i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 220 (314)
T 3com_A 146 KIHRDIKAGNILLNTEGH--AKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE 220 (314)
T ss_dssp EECCCCSGGGEEECTTCC--EEECCCTTCEECBTTBS---CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHH
T ss_pred CcCCCcCHHHEEECCCCC--EEEeecccchhhhhhcc---ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHh
Confidence 999999999999977765 99999999987654321 2234468999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHH-HHHHHccC---cccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESFERD-ANIVKDRK---DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~~~~-~~~i~~~~---~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| ..||....... ...+.... ...+..+++++.+||.+||+.||++|
T Consensus 221 g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 270 (314)
T 3com_A 221 G-KPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQR 270 (314)
T ss_dssp S-SCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTS
T ss_pred C-CCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhC
Confidence 8 66776653322 22222222 12345678999999999999999998
No 159
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-36 Score=327.14 Aligned_cols=265 Identities=23% Similarity=0.288 Sum_probs=193.6
Q ss_pred ceecceEEEeEEecccCceEEEEEEee------CCcEEEEEEeecCC----chHHHHHHHHHHHhC-CCCceeeeccccc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTH----HDVALKEIQNLIASD-QHPNIVRWYGVES 537 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~------~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~ 537 (753)
+...++|.+.+.||+|+||.||++... .+..||||++.... .+...+|+. ++..+ +||||+++++++.
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK-MMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHH-HHHHHCCCTTBCCEEEEEC
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHH-HHHhhcCCCCeeeEEEEEe
Confidence 445678999999999999999999752 46789999996432 234556665 66777 9999999999999
Q ss_pred CCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 538 ~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
+.+..++||| |+++|+|.+++.......... .... ..............+++..++.++.||+.
T Consensus 120 ~~~~~~lv~e----------~~~~g~L~~~l~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~l~~~~~~~i~~qi~~ 183 (344)
T 1rjb_A 120 LSGPIYLIFE----------YCCYGDLLNYLRSKREKFSED---EIEY---ENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183 (344)
T ss_dssp SSSSCEEEEE----------CCTTCBHHHHHHTTTTCC---------------------------CCHHHHHHHHHHHHH
T ss_pred eCCccEEEEe----------cCCCCcHHHHHhhcccccccc---ccch---hhhcccccccccccCCHHHHHHHHHHHHH
Confidence 9999999999 666778887776543211000 0000 00000001112345899999999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHH
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSL 697 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSf 697 (753)
||+|||+.+|+||||||+|||++.++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||
T Consensus 184 aL~~LH~~~ivH~Dikp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 260 (344)
T 1rjb_A 184 GMEFLEFKSCVHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNY-VVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260 (344)
T ss_dssp HHHHHHHTTEEETTCSGGGEEEETTT--EEEECCCGGGSCGGGCTTS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred HHHHHHhCCcccCCCChhhEEEcCCC--cEEeCCCccCcccccCccc-eeccCccCccCccCHHHhccCCCChhHhHHHH
Confidence 99999999999999999999997775 5999999999876543221 12223346889999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCChH--HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 698 GCILFFCITGGKHPYGESFE--RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~~~--~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++|||+|++.+||..... .....+... ....+..+++++.+||.+||+.||++|
T Consensus 261 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 319 (344)
T 1rjb_A 261 GILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKR 319 (344)
T ss_dssp HHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhC
Confidence 99999999933778866432 222333332 344566788999999999999999998
No 160
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.9e-36 Score=314.66 Aligned_cols=235 Identities=24% Similarity=0.336 Sum_probs=179.2
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc------hHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
.++|.+.+.||+|+||.||++.. .|+.||||++..... ...++++..+++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35788999999999999999876 489999999864321 13344444588999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+.+|+|.+++. ...+++..+++++.|++.||+|||+.
T Consensus 85 ~e----------~~~~~~L~~~~~------------------------------~~~~~~~~~~~i~~~l~~~l~~lH~~ 124 (271)
T 3dtc_A 85 ME----------FARGGPLNRVLS------------------------------GKRIPPDILVNWAVQIARGMNYLHDE 124 (271)
T ss_dssp EE----------CCTTEEHHHHHT------------------------------SSCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred EE----------cCCCCCHHHHhh------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99 666777777653 23578889999999999999999999
Q ss_pred C---ccccCCCCCcEEEecC------CCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHH
Q 004442 626 G---LIHRDLKPQNVLISKD------KSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFS 696 (753)
Q Consensus 626 ~---IiHrDLKp~NILL~~d------~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwS 696 (753)
+ |+||||||+||+++.+ ....+||+|||+++...... .....||+.|+|||.+.+..++.++||||
T Consensus 125 ~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 199 (271)
T 3dtc_A 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-----KMSAAGAYAWMAPEVIRASMFSKGSDVWS 199 (271)
T ss_dssp SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------------CCGGGSCHHHHHHCCCSHHHHHHH
T ss_pred CCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc-----ccCCCCccceeCHHHhccCCCCchhhHHH
Confidence 8 9999999999999752 13459999999998764322 12345899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCChHHH-HHHHHcc--CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 697 LGCILFFCITGGKHPYGESFERD-ANIVKDR--KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~~~~-~~~i~~~--~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+++|||++| .+||....... ....... ....+..+++++.++|.+||+.||++|
T Consensus 200 lG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 258 (271)
T 3dtc_A 200 YGVLLWELLTG-EVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSR 258 (271)
T ss_dssp HHHHHHHHHHC-CCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHhC-CCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccC
Confidence 99999999998 66776654332 2222222 234567788999999999999999998
No 161
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=327.50 Aligned_cols=235 Identities=23% Similarity=0.306 Sum_probs=177.4
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
++|.+.+.||+|+||+||++... +++.||||++...... ...+|+. +++.++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVS-LLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHH-HHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHH-HHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 46889999999999999999765 6899999999644322 2234555 7789999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
+|.++|. +++... ...+++..+..++.|++.||+|||+.+|
T Consensus 81 ~~~~~l~-----------~~~~~~----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~i 121 (324)
T 3mtl_A 81 YLDKDLK-----------QYLDDC----------------------------GNIINMHNVKLFLFQLLRGLAYCHRQKV 121 (324)
T ss_dssp CCSEEHH-----------HHHHHT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ccccCHH-----------HHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 6665444 433221 2357788899999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHHHHHHHHHHHHh
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIwSfGvvL~EllT 706 (753)
+||||||+|||++.++. +||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 122 vH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~ 196 (324)
T 3mtl_A 122 LHRDLKPQNLLINERGE--LKLADFGLARAKSIPT---KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT 196 (324)
T ss_dssp EESSCCGGGEEECTTCC--EEECSSSEEECC---------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred cCCCcCHHHEEECCCCC--EEEccCcccccccCCc---cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 99999999999977765 9999999998654321 12234468999999999877 568999999999999999999
Q ss_pred CCCCCCCCChHHH-HHHHHcc-C-----------------------------cccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESFERD-ANIVKDR-K-----------------------------DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~~~~-~~~i~~~-~-----------------------------~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| .+||.+..... ...+... . ......+++++.+||++||+.||++|
T Consensus 197 g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 273 (324)
T 3mtl_A 197 G-RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNR 273 (324)
T ss_dssp S-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred C-CCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccC
Confidence 8 67776654332 2222110 0 01123467899999999999999998
No 162
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-36 Score=335.30 Aligned_cols=240 Identities=20% Similarity=0.304 Sum_probs=179.2
Q ss_pred ceEEEeEEecccCceEEEEEEeeC----CcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccC-CceEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD-QDFVY 543 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~-~~~~~ 543 (753)
..|.+.+.||+|+||+||+|...+ +..||||.+..... +.+.+|.. +++.++||||++++++|.+ ++..+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHT-TSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEEcCCCCeE
Confidence 457888999999999999987643 24689999865432 23344444 7788999999999998765 56789
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++... ...+++.+++.++.||+.||+|||
T Consensus 168 lv~e----------~~~~g~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~aL~~LH 209 (373)
T 3c1x_A 168 VVLP----------YMKHGDLRNFIRNE----------------------------THNPTVKDLIGFGLQVAKGMKFLA 209 (373)
T ss_dssp EEEE----------CCTTCBHHHHHHCT----------------------------TCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------CCCCCCHHHHHhhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 77788888887532 234677888999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcc-cccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC-LTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
+.+|+||||||+|||++.++ .+||+|||+++........ ........+|+.|+|||++.+..++.++|||||||++|
T Consensus 210 ~~~ivHrDlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ 287 (373)
T 3c1x_A 210 SKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 287 (373)
T ss_dssp HTTCCCSCCCGGGEEECTTC--CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HCCEecCccchheEEECCCC--CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHH
Confidence 99999999999999997665 4999999999876432211 11122345788999999999999999999999999999
Q ss_pred HHHhCCCCCCCCChHH-HHHHHH-ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFER-DANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~~-~~~~i~-~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+||+.+||...... ....+. ......+..+++++.++|.+||+.||++|
T Consensus 288 ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~R 340 (373)
T 3c1x_A 288 ELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMR 340 (373)
T ss_dssp HHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 9999778888765332 222233 33344566788999999999999999998
No 163
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.5e-36 Score=342.50 Aligned_cols=239 Identities=25% Similarity=0.403 Sum_probs=189.9
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
..+.+.|.+.+.||+|+||+||++... ++..||||++.+.. .....+|+. +++.++||||++++++|.+.+..
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~ 111 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVA-VLKLLDHPNIMKLYDFFEDKRNY 111 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEE
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHH-HHHhCCCCCCCeEEEEEEeCCEE
Confidence 345678999999999999999999765 68999999996532 234445554 78999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+.+|+|.+++.. ...+++..+..++.||+.||+||
T Consensus 112 ~lv~e----------~~~~g~L~~~~~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~l 152 (494)
T 3lij_A 112 YLVME----------CYKGGELFDEIIH-----------------------------RMKFNEVDAAVIIKQVLSGVTYL 152 (494)
T ss_dssp EEEEE----------CCCSCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------cCCCCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 6667777776643 24578888999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL 701 (753)
|+.+|+||||||+|||++.++ ...+||+|||+++...... .....+||+.|+|||++. ..++.++|||||||++
T Consensus 153 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il 227 (494)
T 3lij_A 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK----KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVIL 227 (494)
T ss_dssp HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB----CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHH
T ss_pred HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc----cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHH
Confidence 999999999999999997543 3469999999998775432 234456999999999886 5699999999999999
Q ss_pred HHHHhCCCCCCCCCh-HHHHHHHHccCccc----ccCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGESF-ERDANIVKDRKDLF----LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~-~~~~~~i~~~~~~~----~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+|++| .+||.... ......+......+ ...+++++.+||++||+.||++|
T Consensus 228 ~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R 283 (494)
T 3lij_A 228 FILLAG-YPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRR 283 (494)
T ss_dssp HHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhC
Confidence 999998 66776654 34444444443332 24678999999999999999998
No 164
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.5e-37 Score=339.37 Aligned_cols=213 Identities=24% Similarity=0.362 Sum_probs=150.2
Q ss_pred ceecceEEE-eEEecccCceEEEEEEee---CCcEEEEEEeecCCc-hHHHHHHHHHHHhCCCCceeeecccc--cCCce
Q 004442 469 RRIGKLVVF-NKEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVE--SDQDF 541 (753)
Q Consensus 469 ~~i~~~~~i-~~~IG~G~fG~Vyka~~~---~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~L~g~~--~~~~~ 541 (753)
+.+.+.|.+ .+.||+|+||+||+|... +++.||||++..... ....+|+. +++.++||||+++++++ .....
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIA-LLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHH-HHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHH-HHHhcCCCCeeeEeeEEecCCCCe
Confidence 445566776 457999999999999765 578999999976543 34556665 88999999999999998 45778
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++|||||.++|.+++ ........ ......+++..++.|+.||+.||+|
T Consensus 95 ~~lv~e~~~~~l~~~~-----------~~~~~~~~--------------------~~~~~~l~~~~~~~i~~qi~~al~~ 143 (405)
T 3rgf_A 95 VWLLFDYAEHDLWHII-----------KFHRASKA--------------------NKKPVQLPRGMVKSLLYQILDGIHY 143 (405)
T ss_dssp EEEEEECCSEEHHHHH-----------HHHHHHC---------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHH-----------HHhccccc--------------------cccccCCCHHHHHHHHHHHHHHHHH
Confidence 9999997776555444 22111000 0112358899999999999999999
Q ss_pred hhhCCccccCCCCCcEEEec--CCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC-CCCchhhHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISK--DKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG-RQTRAIDLFSLG 698 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~--d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDIwSfG 698 (753)
||+.+|+||||||+|||+.. +....+||+|||+++...............+||+.|+|||++.+. .++.++||||||
T Consensus 144 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG 223 (405)
T 3rgf_A 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG 223 (405)
T ss_dssp HHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHH
T ss_pred HHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHH
Confidence 99999999999999999943 222459999999998775433332334456799999999999874 489999999999
Q ss_pred HHHHHHHhCCCCCCCC
Q 004442 699 CILFFCITGGKHPYGE 714 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~ 714 (753)
|++|||+|| .+||..
T Consensus 224 ~il~ell~g-~~pf~~ 238 (405)
T 3rgf_A 224 CIFAELLTS-EPIFHC 238 (405)
T ss_dssp HHHHHHHHS-SCTTCC
T ss_pred HHHHHHHhC-CCCCCC
Confidence 999999998 677754
No 165
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.2e-36 Score=326.99 Aligned_cols=239 Identities=23% Similarity=0.348 Sum_probs=184.1
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCC-----
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQ----- 539 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~----- 539 (753)
.++.+|.+.+.||+|+||.||++... +++.||||++...... ...+|+. ++..++||||+++++++...
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK-ILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHH-HHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHH-HHHhcCCCCCccceeEEecCCcccc
Confidence 34578999999999999999999754 6889999999754322 3345554 78899999999999998654
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
...++|||+|.++ |.+++. ...+++.++..++.||+.||
T Consensus 103 ~~~~iv~e~~~~~-----------L~~~l~------------------------------~~~~~~~~~~~i~~qi~~aL 141 (364)
T 3qyz_A 103 KDVYIVQDLMETD-----------LYKLLK------------------------------TQHLSNDHICYFLYQILRGL 141 (364)
T ss_dssp CCEEEEEECCSEE-----------HHHHHH------------------------------HCCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcccCcC-----------HHHHHH------------------------------hCCCCHHHHHHHHHHHHHHH
Confidence 4689999966544 444332 23578888999999999999
Q ss_pred HHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHHHHH
Q 004442 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFSLG 698 (753)
Q Consensus 620 ~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIwSfG 698 (753)
+|||+.+|+||||||+|||++.++. +||+|||+++...............+||+.|+|||++.+ ..++.++||||||
T Consensus 142 ~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG 219 (364)
T 3qyz_A 142 KYIHSANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219 (364)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHH
T ss_pred HHHHHCCeecCCCChHhEEECCCCC--EEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHH
Confidence 9999999999999999999977755 999999999877543322223345579999999998765 4489999999999
Q ss_pred HHHHHHHhCCCCCCCCChH-HHHHHHHcc--C-----------------------------cccccCCCHHHHHHHHHcc
Q 004442 699 CILFFCITGGKHPYGESFE-RDANIVKDR--K-----------------------------DLFLVEHIPEAVDLFTRLL 746 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~~-~~~~~i~~~--~-----------------------------~~~~~~~s~el~dLI~~cL 746 (753)
|++|||++| .+||.+... .....+... . ......+++++.+||.+||
T Consensus 220 ~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 298 (364)
T 3qyz_A 220 CILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298 (364)
T ss_dssp HHHHHHHHS-SCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHT
T ss_pred HHHHHHHHC-CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHc
Confidence 999999998 677765432 222221100 0 0112456889999999999
Q ss_pred ccCcCCC
Q 004442 747 DPNPDLR 753 (753)
Q Consensus 747 ~~DP~~R 753 (753)
+.||++|
T Consensus 299 ~~dP~~R 305 (364)
T 3qyz_A 299 TFNPHKR 305 (364)
T ss_dssp CSSTTTS
T ss_pred CCChhhC
Confidence 9999998
No 166
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.9e-36 Score=344.33 Aligned_cols=239 Identities=26% Similarity=0.427 Sum_probs=192.6
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCce
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~ 541 (753)
..+.++|.+.+.||+|+||.||++... +|+.||||++.... .....+|+. +++.++||||+++++++.+.+.
T Consensus 22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~ 100 (484)
T 3nyv_A 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ-LLKQLDHPNIMKLYEFFEDKGY 100 (484)
T ss_dssp CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSE
T ss_pred CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHH-HHHhCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999765 69999999986432 233455555 7899999999999999999999
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+.+|+|.+++.. ...+++..+..++.||+.||.|
T Consensus 101 ~~lv~e----------~~~~~~L~~~~~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~ 141 (484)
T 3nyv_A 101 FYLVGE----------VYTGGELFDEIIS-----------------------------RKRFSEVDAARIIRQVLSGITY 141 (484)
T ss_dssp EEEEEC----------CCCSCBHHHHHHT-----------------------------CSCCBHHHHHHHHHHHHHHHHH
T ss_pred EEEEEe----------cCCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 999999 6667788777642 2457888999999999999999
Q ss_pred hhhCCccccCCCCCcEEEecC-CCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d-~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
||+.+|+||||||+|||++.+ ....+||+|||+++...... .....+||+.|+|||++.+ .++.++|||||||+
T Consensus 142 lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~i 216 (484)
T 3nyv_A 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK----KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVI 216 (484)
T ss_dssp HHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC----SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHH
T ss_pred HHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc----ccccCCCCccccCceeecC-CCCCcceeHHHHHH
Confidence 999999999999999999532 22459999999998765432 1233468999999999876 69999999999999
Q ss_pred HHHHHhCCCCCCCCChH-HHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFE-RDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~-~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|+|++| .+||..... .....+...... ....+++++.+||++||++||++|
T Consensus 217 l~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R 273 (484)
T 3nyv_A 217 LYILLSG-CPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMR 273 (484)
T ss_dssp HHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHC-CCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHC
Confidence 9999998 667766543 344444444332 235678999999999999999998
No 167
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2e-36 Score=317.27 Aligned_cols=241 Identities=24% Similarity=0.339 Sum_probs=188.7
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeeccccc--CCceEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVES--DQDFVYL 544 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~--~~~~~~L 544 (753)
.++|++.+.||+|+||.||++... +|+.||+|++..... ...+.++..+++.++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467899999999999999999765 689999999975431 122333334788999999999999874 4678999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+++|+|.+++..... ....+++..+++++.|++.||+|||+
T Consensus 85 v~e----------~~~~~~L~~~l~~~~~-------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~ 129 (279)
T 2w5a_A 85 VME----------YCEGGDLASVITKGTK-------------------------ERQYLDEEFVLRVMTQLTLALKECHR 129 (279)
T ss_dssp EEE----------CCTTEEHHHHHHHHHH-------------------------TTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe----------CCCCCCHHHHHHhhcc-------------------------cCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999 6667778777764321 12458889999999999999999999
Q ss_pred CC-----ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHH
Q 004442 625 IG-----LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 699 (753)
Q Consensus 625 ~~-----IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGv 699 (753)
.+ |+||||||+||+++.++. +||+|||+++....... ......||+.|+|||++.+..++.++||||||+
T Consensus 130 ~~~~~~~ivH~dl~p~NIl~~~~~~--~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 204 (279)
T 2w5a_A 130 RSDGGHTVLHRDLKPANVFLDGKQN--VKLGDFGLARILNHDTS---FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204 (279)
T ss_dssp HC------CCCCCSGGGEEECSSSC--EEECCCCHHHHC---CH---HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHH
T ss_pred ccCCCCeeEEeccchhhEEEcCCCC--EEEecCchheeeccccc---cccccCCCccccChHHhccCCCCchhhHHHHHH
Confidence 98 999999999999976654 99999999987653221 112335899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCChHH-HHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~~~-~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||+|| .+||...... ....+... ....+..+++++.++|.+||+.||++|
T Consensus 205 il~~l~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 259 (279)
T 2w5a_A 205 LLYELCAL-MPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHR 259 (279)
T ss_dssp HHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHC-CCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccC
Confidence 99999998 6787765433 33333333 335667889999999999999999998
No 168
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.2e-36 Score=327.89 Aligned_cols=239 Identities=21% Similarity=0.273 Sum_probs=186.0
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcE----EEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRS----VAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~----VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
.++|.+.+.||+|+||+||+|... +++. ||+|.+.... .....+|+. +++.++||||++++++|. .+..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML-AIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHH-HHHTCCCTTBCCEEEEEC-BSSE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHH-HHhcCCCCCcCeEEEEEc-CCcc
Confidence 356889999999999999999754 3443 8888875432 123344554 778999999999999986 5668
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+.+|+|.+++.... ..+++..++.++.||+.||+||
T Consensus 90 ~~v~e----------~~~~~~L~~~l~~~~----------------------------~~~~~~~~~~~~~qi~~~l~~l 131 (325)
T 3kex_A 90 QLVTQ----------YLPLGSLLDHVRQHR----------------------------GALGPQLLLNWGVQIAKGMYYL 131 (325)
T ss_dssp EEEEE----------CCTTCBSHHHHHSSG----------------------------GGSCTTHHHHHHHHHHHHHHHH
T ss_pred EEEEE----------eCCCCCHHHHHHHcc----------------------------ccCCHHHHHHHHHHHHHHHHHH
Confidence 99999 777888888875421 2466778899999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
|+.+|+||||||+|||++.++. +||+|||+++........ .......||..|+|||++.+..++.++|||||||++|
T Consensus 132 H~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 208 (325)
T 3kex_A 132 EEHGMVHRNLAARNVLLKSPSQ--VQVADFGVADLLPPDDKQ-LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVW 208 (325)
T ss_dssp HHTTCCCSCCSSTTEEESSSSC--EEECSCSGGGGSCCCTTC-CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HhCCCCCCccchheEEECCCCe--EEECCCCcccccCccccc-ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHH
Confidence 9999999999999999977665 999999999887543221 1223445788999999999999999999999999999
Q ss_pred HHHhCCCCCCCCChH-HHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~-~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+|++..||..... .....+... ....+..+++++.++|.+||..||++|
T Consensus 209 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 261 (325)
T 3kex_A 209 ELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIR 261 (325)
T ss_dssp HHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTS
T ss_pred HHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhC
Confidence 999933778876543 333334433 445566778899999999999999998
No 169
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.7e-36 Score=337.61 Aligned_cols=203 Identities=26% Similarity=0.296 Sum_probs=164.5
Q ss_pred cceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc--hHHHHHHHHHHHhC------CCCceeeecccccC
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH--DVALKEIQNLIASD------QHPNIVRWYGVESD 538 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l------~HpNIV~L~g~~~~ 538 (753)
...+..+|.+.+.||+|+||+||+|... +++.||||++..... ....+|+. ++..+ .|+||+++++++..
T Consensus 92 ~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~-~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR-ILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHH-HHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred CCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHH-HHHHHhhccccCCcCEEEEEeeccc
Confidence 3566778999999999999999999665 489999999976432 23344444 33433 68899999999999
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++|||+|.++ |.+++... ....+++..+.+|+.||+.|
T Consensus 171 ~~~~~lv~e~~~~~-----------L~~~l~~~---------------------------~~~~~~~~~~~~i~~qi~~a 212 (429)
T 3kvw_A 171 RNHICMTFELLSMN-----------LYELIKKN---------------------------KFQGFSLPLVRKFAHSILQC 212 (429)
T ss_dssp TTEEEEEECCCCCB-----------HHHHHHHT---------------------------TTCCCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeccCCC-----------HHHHHHhc---------------------------cCCCCCHHHHHHHHHHHHHH
Confidence 99999999966544 44444322 12357888999999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
|+|||+.+|+||||||+|||++.++...+||+|||+++..... ....+||+.|+|||++.+..++.++||||||
T Consensus 213 L~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 286 (429)
T 3kvw_A 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR------VYTYIQSRFYRAPEVILGARYGMPIDMWSLG 286 (429)
T ss_dssp HHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHH
T ss_pred HHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCc------ccccCCCCCccChHHHhCCCCCchHHHHhHH
Confidence 9999999999999999999998877656999999999765432 2345689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCh
Q 004442 699 CILFFCITGGKHPYGESF 716 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~ 716 (753)
|++|||+|| .+||....
T Consensus 287 ~il~elltG-~~pf~~~~ 303 (429)
T 3kvw_A 287 CILAELLTG-YPLLPGED 303 (429)
T ss_dssp HHHHHHHHS-SCSSCCSS
T ss_pred HHHHHHHhC-CCCCCCCC
Confidence 999999999 66776553
No 170
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.3e-36 Score=321.54 Aligned_cols=238 Identities=23% Similarity=0.299 Sum_probs=180.3
Q ss_pred eecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
...++|.+.+.||+|+||.||+|... ..+|||.++.... +.+.+|+ .+++.++|+||+++++++.+ +..++
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~-~~~~l 108 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEV-AVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHH-HHHHhCCCCCEEEEEEEEcc-CcEEE
Confidence 34467788999999999999998654 4699998865321 2233444 47899999999999998754 55789
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.++++.. ...+++.+++.|+.||+.||+|||+
T Consensus 109 v~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~~L~~LH~ 150 (307)
T 3lb7_A 109 VTQ----------WCEGSSLYKHLHVQ----------------------------ETKFQMFQLIDIARQTAQGMDYLHA 150 (307)
T ss_dssp EEE----------CCSSCBHHHHHHTS----------------------------CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe----------cCCCCcHHHHHHhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 66778888877532 2457888999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc---CCCCCchhhHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL---QGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDIwSfGvvL 701 (753)
.+|+||||||+|||++.++ .+||+|||+++...... .........||+.|+|||++. +..++.++|||||||++
T Consensus 151 ~~ivH~Dlkp~NIll~~~~--~~kl~DFg~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il 227 (307)
T 3lb7_A 151 KNIIHRDMKSNNIFLHEGL--TVKIGDFGLATVKSRWS-GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL 227 (307)
T ss_dssp TTCCCSCCCSSSEEECTTS--CEEECCCCSSCC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHH
T ss_pred CCEeeCCCChhhEEEcCCC--CEEEccCCCceeccccc-ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHH
Confidence 9999999999999997765 49999999998654321 112233456999999999986 66789999999999999
Q ss_pred HHHHhCCCCCCCCChHH--HHHHHHccC-c----ccccCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGESFER--DANIVKDRK-D----LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~~~--~~~~i~~~~-~----~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||+|| ..||...... ....+.... . .....+++++.+||.+||+.||++|
T Consensus 228 ~elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 285 (307)
T 3lb7_A 228 YELMTG-ELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEER 285 (307)
T ss_dssp HHHHHS-SCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTS
T ss_pred HHHHhC-CCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhC
Confidence 999998 6788654322 222222221 1 1235678999999999999999998
No 171
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6e-36 Score=323.33 Aligned_cols=257 Identities=23% Similarity=0.330 Sum_probs=194.7
Q ss_pred eecceEEEeEEecccCceEEEEEEe--------eCCcEEEEEEeecCCch----HHHHHHHHHHHhC-CCCceeeecccc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN--------YEGRSVAVKRLVKTHHD----VALKEIQNLIASD-QHPNIVRWYGVE 536 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~--------~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l-~HpNIV~L~g~~ 536 (753)
...++|.+.+.||+|+||.||+|.. .++..||||++...... ...+|+. +++.+ +||||++++++|
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME-MMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEEE
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHH-HHHHhhcCCCEeeEEEEE
Confidence 3457899999999999999999975 35789999999765432 3345555 56666 999999999999
Q ss_pred cCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHH
Q 004442 537 SDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (753)
Q Consensus 537 ~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa 616 (753)
.+.+..++||| |+.+|+|.+++........... ..........+++.++++++.||+
T Consensus 111 ~~~~~~~lv~e----------~~~~~~L~~~l~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~qi~ 167 (334)
T 2pvf_A 111 TQDGPLYVIVE----------YASKGNLREYLRARRPPGMEYS-------------YDINRVPEEQMTFKDLVSCTYQLA 167 (334)
T ss_dssp CSSSCCEEEEE----------CCTTCBHHHHHHTTSCTTCCSC-------------C--------CCCHHHHHHHHHHHH
T ss_pred ccCCceEEEEE----------CCCCCcHHHHHHHhcccccccc-------------ccccccccccCCHHHHHHHHHHHH
Confidence 99999999999 6777888888865432110000 000012234588999999999999
Q ss_pred HHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHH
Q 004442 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFS 696 (753)
Q Consensus 617 ~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwS 696 (753)
.||+|||+.+|+||||||+||+++.++. +||+|||+++....... ........+|+.|+|||++.+..++.++||||
T Consensus 168 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 244 (334)
T 2pvf_A 168 RGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244 (334)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECTTTSS-EECCSCCCCCGGGCCHHHHHHCEECHHHHHHH
T ss_pred HHHHHHHhCCeeCCCCccceEEEcCCCC--EEEcccccccccccccc-ccccCCCCcccceeChHHhcCCCcChHHHHHH
Confidence 9999999999999999999999977764 99999999987754321 12223445788999999999888999999999
Q ss_pred HHHHHHHHHhCCCCCCCCChH-HHHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 697 LGCILFFCITGGKHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~~-~~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++|||+|++..||..... .....+.. .....+..+++++.++|.+||+.||++|
T Consensus 245 lG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 303 (334)
T 2pvf_A 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQR 303 (334)
T ss_dssp HHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence 999999999944778866533 33333333 3345667789999999999999999998
No 172
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.2e-36 Score=315.11 Aligned_cols=238 Identities=23% Similarity=0.315 Sum_probs=185.6
Q ss_pred ecceEEEeEEecccCceEEEEEEeeC----CcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
..++|.+.+.||+|+||+||+|...+ +..||||.+..... +...+|+. +++.++||||+++++++.++ ..
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~-~~ 87 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKLIGIIEEE-PT 87 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHH-HHHHHCCTTBCCEEEEECSS-SC
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHH-HHHhCCCCCcceEEEEEcCC-CC
Confidence 34678999999999999999987653 34699999976532 23344444 77888999999999998654 56
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+.+|+|.+++... ...+++..++.++.|++.||.||
T Consensus 88 ~~v~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~l 129 (281)
T 3cc6_A 88 WIIME----------LYPYGELGHYLERN----------------------------KNSLKVLTLVLYSLQICKAMAYL 129 (281)
T ss_dssp EEEEE----------CCTTCBHHHHHHHH----------------------------TTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------cCCCCCHHHHHHhc----------------------------cccCCHHHHHHHHHHHHHHHHHH
Confidence 89999 66778888877532 23477888999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
|+.+|+||||||+||+++.++ .+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|
T Consensus 130 H~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 205 (281)
T 3cc6_A 130 ESINCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDY--YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMW 205 (281)
T ss_dssp HHTTCCCCCCSGGGEEEEETT--EEEECCCCGGGCC-----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HHCCcccCCCccceEEECCCC--cEEeCccCCCcccccccc--cccccCCCCcceeCchhhccCCCCchhccHHHHHHHH
Confidence 999999999999999998776 499999999987654321 1123345788999999999999999999999999999
Q ss_pred HHHh-CCCCCCCCC-hHHHHHHH-HccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCIT-GGKHPYGES-FERDANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllT-G~~~Pf~~~-~~~~~~~i-~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+| | ++||... .......+ .......+..+++++.++|.+||+.||++|
T Consensus 206 ~llt~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 258 (281)
T 3cc6_A 206 EILSFG-KQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDR 258 (281)
T ss_dssp HHHTTT-CCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHhCC-CCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhC
Confidence 9999 6 6677543 33333333 333445667789999999999999999998
No 173
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=353.93 Aligned_cols=238 Identities=24% Similarity=0.336 Sum_probs=184.9
Q ss_pred eEEEeE-EecccCceEEEEEEee---CCcEEEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 474 LVVFNK-EIAKGSNGTVVLEGNY---EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 474 ~~~i~~-~IG~G~fG~Vyka~~~---~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
.+.+.+ .||+|+||.||+|... ++..||||+++... .+.+.+|+. +++.++|||||+++++|.+ +..++|
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~-il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ-IMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHH-HHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHH-HHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 344444 7999999999998664 46789999997532 234455555 7899999999999999976 569999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+.+|+|.+++... ...+++.+++.|+.||+.||+|||+.
T Consensus 414 ~E----------~~~~g~L~~~l~~~----------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~ 455 (613)
T 2ozo_A 414 ME----------MAGGGPLHKFLVGK----------------------------REEIPVSNVAELLHQVSMGMKYLEEK 455 (613)
T ss_dssp EE----------CCTTCBHHHHHTTC----------------------------TTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE----------eCCCCcHHHHHhhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 77788998887532 23578889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
+|+||||||+|||++.++ .+||+|||+++................+|+.|+|||++.+..++.++|||||||++|||+
T Consensus 456 ~iiHrDlkp~NILl~~~~--~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ell 533 (613)
T 2ozo_A 456 NFVHRNLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 533 (613)
T ss_dssp TCCCSCCSGGGEEEEETT--EEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CEEcCcCCHHHEEEcCCC--cEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999998775 599999999987654332222223334678999999999999999999999999999999
Q ss_pred hCCCCCCCCCh-HHHHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~-~~~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|.+..||.... ......+... ....+..+++++.+||.+||+.||++|
T Consensus 534 t~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~R 583 (613)
T 2ozo_A 534 SYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDR 583 (613)
T ss_dssp TTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTS
T ss_pred HCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHC
Confidence 93377887653 3333444443 345667789999999999999999998
No 174
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.1e-36 Score=325.79 Aligned_cols=242 Identities=25% Similarity=0.312 Sum_probs=188.6
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
....++|.+.+.||+|+||+||++.. .+|+.||||++..... ...+.|+..+++.++|+||+++++++.+++..+
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 34457789999999999999999976 4699999999975432 244556665678899999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+|||||.+ +|.+++.... .....+++..+++++.||+.||+|||
T Consensus 127 lv~e~~~~-----------~L~~~l~~~~-------------------------~~~~~l~~~~~~~i~~qi~~~l~~lH 170 (340)
T 3an0_A 127 ICMELMDT-----------SLDKFYKQVI-------------------------DKGQTIPEDILGKIAVSIVKALEHLH 170 (340)
T ss_dssp EEECCCSE-----------EHHHHHHHHH-------------------------HTSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEHHHhhC-----------cHHHHHHHHH-------------------------hcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99996654 4444443221 12356889999999999999999999
Q ss_pred hC-CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC----CCCCchhhHHHHH
Q 004442 624 EI-GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ----GRQTRAIDLFSLG 698 (753)
Q Consensus 624 ~~-~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~t~ksDIwSfG 698 (753)
+. +|+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.+ ..++.++||||||
T Consensus 171 ~~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG 244 (340)
T 3an0_A 171 SKLSVIHRDVKPSNVLINALGQ--VKMCDFGISGYLVDSV----AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLG 244 (340)
T ss_dssp HHTCCCCCSCCSTTEEECSTTC--EEECCCSHHHHHSCHH----HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHH
T ss_pred hcCCeecCCCCHHHEEECCCCC--EEEeeCCCceeccccc----ccccCCCCccccCccccccccccCCCCchhhHHHHH
Confidence 87 9999999999999977764 9999999998764321 1223468999999999743 4689999999999
Q ss_pred HHHHHHHhCCCCCCCCC--hHH-HHHHHHccCccc-ccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGES--FER-DANIVKDRKDLF-LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~--~~~-~~~~i~~~~~~~-~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||+|| ..||... ... ....+....... ...+++++.+||.+||+.||++|
T Consensus 245 ~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 302 (340)
T 3an0_A 245 ITMIELAIL-RFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKER 302 (340)
T ss_dssp HHHHHHHHT-SCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHC-CCCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccC
Confidence 999999999 6788653 222 222333333322 34578999999999999999998
No 175
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.2e-35 Score=326.22 Aligned_cols=238 Identities=24% Similarity=0.383 Sum_probs=190.1
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----------hHHHHHHHHHHHhC-CCCceeeeccc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----------DVALKEIQNLIASD-QHPNIVRWYGV 535 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l-~HpNIV~L~g~ 535 (753)
..+.++|.+.+.||+|+||.||+|... +|+.||||++..... +...+|+. ++..+ +||||++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH-ILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHH-HHHHHTTCTTBCCEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHH-HHHHhcCCCCEeEEEEE
Confidence 344577999999999999999999875 699999999865431 12334544 55666 89999999999
Q ss_pred ccCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHH
Q 004442 536 ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (753)
Q Consensus 536 ~~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qI 615 (753)
+...+..++||| |+.+|+|.+++.. ...+++..+..++.||
T Consensus 169 ~~~~~~~~lv~e----------~~~g~~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi 209 (365)
T 2y7j_A 169 YESSSFMFLVFD----------LMRKGELFDYLTE-----------------------------KVALSEKETRSIMRSL 209 (365)
T ss_dssp EEBSSEEEEEEC----------CCTTCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHH
T ss_pred EeeCCEEEEEEE----------eCCCCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHH
Confidence 999999999999 7777888887743 2357888999999999
Q ss_pred HHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC------CCCC
Q 004442 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ------GRQT 689 (753)
Q Consensus 616 a~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~t 689 (753)
+.||.|||+.||+||||||+|||++.++. +||+|||++..+.... .....+||+.|+|||++.+ ..++
T Consensus 210 ~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~--ikl~DfG~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 283 (365)
T 2y7j_A 210 LEAVSFLHANNIVHRDLKPENILLDDNMQ--IRLSDFGFSCHLEPGE----KLRELCGTPGYLAPEILKCSMDETHPGYG 283 (365)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHTTCTTSCCBC
T ss_pred HHHHHHHHhCCeecCCCCHHHEEECCCCC--EEEEecCcccccCCCc----ccccCCCCCCccChhhccccccccCcCCC
Confidence 99999999999999999999999977765 9999999998775432 2234579999999999863 3578
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHccCccc----ccCCCHHHHHHHHHccccCcCCC
Q 004442 690 RAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLF----LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 690 ~ksDIwSfGvvL~EllTG~~~Pf~~~-~~~~~~~i~~~~~~~----~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.++|||||||++|||+|| .+||... .......+......+ ....++++.+||++||+.||++|
T Consensus 284 ~~~Di~slG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 351 (365)
T 2y7j_A 284 KEVDLWACGVILFTLLAG-SPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEAR 351 (365)
T ss_dssp TTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTS
T ss_pred chhhHHhHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHC
Confidence 999999999999999999 5676554 333333343333222 24678899999999999999998
No 176
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.7e-36 Score=324.06 Aligned_cols=236 Identities=25% Similarity=0.327 Sum_probs=187.8
Q ss_pred eEEEeEEecccCceEEEEEEe-----eCCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccC--CceE
Q 004442 474 LVVFNKEIAKGSNGTVVLEGN-----YEGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESD--QDFV 542 (753)
Q Consensus 474 ~~~i~~~IG~G~fG~Vyka~~-----~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~--~~~~ 542 (753)
.|++.+.||+|+||+||++.. .+++.||||++...... .+.+|+ .+++.++||||+++++++.+ ....
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEI-DILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHH-HHHHhCCCcchhhEEEEEecCCCceE
Confidence 458999999999999988743 36899999999765422 234454 47899999999999999986 4678
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+.+|+|.+++.. ..+++.++++++.|++.||+||
T Consensus 111 ~lv~e----------~~~~~~L~~~l~~------------------------------~~~~~~~~~~i~~~l~~~l~~L 150 (318)
T 3lxp_A 111 QLVME----------YVPLGSLRDYLPR------------------------------HSIGLAQLLLFAQQICEGMAYL 150 (318)
T ss_dssp EEEEC----------CCTTCBHHHHGGG------------------------------SCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------cccCCcHHHHHhh------------------------------CCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 6677888887632 3478889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
|+.+|+||||||+||+++.++. +||+|||+++................+|..|+|||++.+..++.++|||||||++|
T Consensus 151 H~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 228 (318)
T 3lxp_A 151 HAQHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228 (318)
T ss_dssp HHTTEECSCCSGGGEEECTTCC--EEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred HhCCccCCCCchheEEEcCCCC--EEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHH
Confidence 9999999999999999977754 99999999998765443333344556889999999999999999999999999999
Q ss_pred HHHhCCCCCCCCChHHH----------------HHHHH-ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFERD----------------ANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~~~----------------~~~i~-~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+|| ..||....... ...+. ......+..+++++.+||++||+.||++|
T Consensus 229 ~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 295 (318)
T 3lxp_A 229 ELLTH-CDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFR 295 (318)
T ss_dssp HHHTT-TCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHhC-CCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccC
Confidence 99998 56775532211 11111 22345667789999999999999999998
No 177
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.4e-36 Score=317.11 Aligned_cols=236 Identities=27% Similarity=0.378 Sum_probs=182.4
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccCC-ceEEEEEcccc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQ-DFVYLSLERCT 550 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~-~~~~LV~E~c~ 550 (753)
.++|++.+.||+|+||+||++.. .|+.||||.+......+.+.++..+++.++|+||+++++++.+. +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e--- 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE--- 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC---
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe---
Confidence 46789999999999999999865 58999999997665444444444478999999999999997654 57899999
Q ss_pred CChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCcccc
Q 004442 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (753)
Q Consensus 551 ~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHr 630 (753)
|+.+|+|.+++.... ...+++..+++++.|++.||+|||+.+|+||
T Consensus 96 -------~~~~~~L~~~l~~~~---------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 141 (278)
T 1byg_A 96 -------YMAKGSLVDYLRSRG---------------------------RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 141 (278)
T ss_dssp -------CCTTEEHHHHHHHHH---------------------------HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred -------cCCCCCHHHHHHhcc---------------------------cccCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 666777877775432 1236778889999999999999999999999
Q ss_pred CCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 004442 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKH 710 (753)
Q Consensus 631 DLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~~ 710 (753)
||||+||+++.++. +||+|||++....... ....+++.|+|||.+.+..++.++||||||+++|||+|++.+
T Consensus 142 dlkp~Nil~~~~~~--~~l~Dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~ 213 (278)
T 1byg_A 142 DLAARNVLVSEDNV--AKVSDFGLTKEASSTQ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213 (278)
T ss_dssp CCSGGGEEECTTSC--EEECCCCC------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCcceEEEeCCCc--EEEeeccccccccccc------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCC
Confidence 99999999977764 9999999998654321 233478899999999999999999999999999999993377
Q ss_pred CCCCChHHH-HHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 711 PYGESFERD-ANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 711 Pf~~~~~~~-~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||....... ...+.. .....+..+++++.++|++||+.||++|
T Consensus 214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 258 (278)
T 1byg_A 214 PYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMR 258 (278)
T ss_dssp SCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhC
Confidence 887654333 333332 2345567789999999999999999998
No 178
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.6e-36 Score=312.87 Aligned_cols=232 Identities=19% Similarity=0.258 Sum_probs=185.1
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCC--ceEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYL 544 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~--~~~~L 544 (753)
.++|.+.+.||+|+||.||++.. .++.||||++..... +.+.+|+ .+++.++||||+++++++.+. +..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEEC-PRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHG-GGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHH-HHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 35688899999999999999876 489999999975431 1233444 477889999999999999887 78899
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+++|+|.++++... ...+++.++++++.|++.||+|||+
T Consensus 87 v~e----------~~~~~~L~~~l~~~~---------------------------~~~~~~~~~~~i~~qi~~~l~~lH~ 129 (271)
T 3kmu_A 87 ITH----------WMPYGSLYNVLHEGT---------------------------NFVVDQSQAVKFALDMARGMAFLHT 129 (271)
T ss_dssp EEE----------CCTTCBHHHHHHSCS---------------------------SCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred eec----------ccCCCcHHHHHhhcc---------------------------cCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999 777788888875421 2357889999999999999999999
Q ss_pred CC--ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCc---hhhHHHHHH
Q 004442 625 IG--LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTR---AIDLFSLGC 699 (753)
Q Consensus 625 ~~--IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~---ksDIwSfGv 699 (753)
.+ |+||||||+||+++.++. ++|+|||++..... ....||+.|+|||++.+..++. ++|||||||
T Consensus 130 ~~~~i~H~dikp~Nil~~~~~~--~~l~~~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~ 199 (271)
T 3kmu_A 130 LEPLIPRHALNSRSVMIDEDMT--ARISMADVKFSFQS--------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAV 199 (271)
T ss_dssp SSSCCTTCCCSGGGEEECTTSC--EEEEGGGSCCTTSC--------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHH
T ss_pred CCCceecCCCccceEEEcCCcc--eeEEeccceeeecc--------cCccCCccccChhhhccCCCCCCCchhhHHHHHH
Confidence 99 999999999999977755 88998888754322 2345899999999998766544 899999999
Q ss_pred HHHHHHhCCCCCCCCChHHHH-HH-HH-ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGESFERDA-NI-VK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~~~~~-~~-i~-~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||+|| ..||........ .. .. ......+..+++++.++|.+||+.||++|
T Consensus 200 il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 255 (271)
T 3kmu_A 200 LLWELVTR-EVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKR 255 (271)
T ss_dssp HHHHHHHC-SCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHhC-CCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 99999998 667766543322 22 22 23445667889999999999999999998
No 179
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.1e-35 Score=316.12 Aligned_cols=235 Identities=25% Similarity=0.366 Sum_probs=191.3
Q ss_pred cceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
.+.|.+.+.||+|+||.||+|.. .+++.||||++.... .+...+|+ .+++.++|+||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHH-HHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHH-HHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 35688999999999999999965 468999999996543 13334444 4788999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+++|+|.+++. ...+++..++.++.|++.||.|||+.+
T Consensus 100 e----------~~~~~~L~~~~~------------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ 139 (303)
T 3a7i_A 100 E----------YLGGGSALDLLE------------------------------PGPLDETQIATILREILKGLDYLHSEK 139 (303)
T ss_dssp E----------CCTTEEHHHHHT------------------------------TSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred E----------eCCCCcHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9 666677777653 135778889999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllT 706 (753)
|+||||||+||+++.++. +||+|||++....... .......||+.|+|||++.+..++.++||||||+++|||++
T Consensus 140 i~H~dl~p~Nil~~~~~~--~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 214 (303)
T 3a7i_A 140 KIHRDIKAANVLLSEHGE--VKLADFGVAGQLTDTQ---IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 214 (303)
T ss_dssp EECCCCSGGGEEECTTSC--EEECCCTTCEECBTTB---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred CccCCCChheEEECCCCC--EEEeecccceecCccc---cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHcc
Confidence 999999999999977764 9999999998765432 12234568999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHH-HHHH-HccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESFERD-ANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~~~~-~~~i-~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| .+||....... ...+ .......+..+++++.+||.+||+.||++|
T Consensus 215 g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 262 (303)
T 3a7i_A 215 G-EPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFR 262 (303)
T ss_dssp S-SCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGS
T ss_pred C-CCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhC
Confidence 8 66776653332 2222 233344566789999999999999999998
No 180
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.5e-36 Score=337.84 Aligned_cols=240 Identities=28% Similarity=0.415 Sum_probs=183.4
Q ss_pred cceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----------chHHHHHHHHHHHhCCCCceeeeccc
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----------HDVALKEIQNLIASDQHPNIVRWYGV 535 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----------~~~~~~Ei~~ll~~l~HpNIV~L~g~ 535 (753)
...+.++|.+.+.||+|+||+||+|... +++.||||++.... .....+|+. +++.++||||++++++
T Consensus 130 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~ 208 (419)
T 3i6u_A 130 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE-ILKKLNHPCIIKIKNF 208 (419)
T ss_dssp CHHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHH-HHHHCCCTTBCCCCEE
T ss_pred chhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHH-HHHhCCCCCEeeEEEE
Confidence 3456678999999999999999999664 58999999996532 012345554 7899999999999999
Q ss_pred ccCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHH
Q 004442 536 ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (753)
Q Consensus 536 ~~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qI 615 (753)
+.. +..++||| |+++|+|.+++.. ...+++.++..++.|+
T Consensus 209 ~~~-~~~~lv~e----------~~~~g~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi 248 (419)
T 3i6u_A 209 FDA-EDYYIVLE----------LMEGGELFDKVVG-----------------------------NKRLKEATCKLYFYQM 248 (419)
T ss_dssp EES-SEEEEEEE----------CCTTCBGGGGTSS-----------------------------SCCCCHHHHHHHHHHH
T ss_pred Eec-CceEEEEE----------cCCCCcHHHHHhc-----------------------------cCCCCHHHHHHHHHHH
Confidence 754 45799999 6777888776532 2457888999999999
Q ss_pred HHHHHHhhhCCccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC---CCCCch
Q 004442 616 VSGLSHLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ---GRQTRA 691 (753)
Q Consensus 616 a~gL~yLH~~~IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~t~k 691 (753)
+.||+|||+.+|+||||||+|||++.++ ...+||+|||+++..... ......+||+.|+|||++.+ ..++.+
T Consensus 249 ~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 324 (419)
T 3i6u_A 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTPTYLAPEVLVSVGTAGYNRA 324 (419)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC---------------CTTCCTTTTC----CTTHHH
T ss_pred HHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCC----ccccccCCCCCccCceeeecCCCCCCCch
Confidence 9999999999999999999999997543 356999999999876432 22334579999999999863 567899
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHccCccc----ccCCCHHHHHHHHHccccCcCCC
Q 004442 692 IDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDRKDLF----LVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 692 sDIwSfGvvL~EllTG~~~Pf~~~~--~~~~~~i~~~~~~~----~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||||||++|||+|| .+||.... ......+......+ ...+++++.+||++||+.||++|
T Consensus 325 ~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 391 (419)
T 3i6u_A 325 VDCWSLGVILFICLSG-YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 391 (419)
T ss_dssp HHHHHHHHHHHHHHHS-SCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred hhhHhHHHHHHHHHHC-CCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHC
Confidence 9999999999999998 67876532 22333444443332 24678999999999999999998
No 181
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.1e-36 Score=328.81 Aligned_cols=197 Identities=26% Similarity=0.396 Sum_probs=151.8
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCc---
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD--- 540 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~--- 540 (753)
.+.++|.+.+.||+|+||.||++... +++.||||++..... ....+|+. +++.++||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~ 100 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLE 100 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSCCSTT
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHH-HHHhcCCCCccceEEeeccccccc
Confidence 34578999999999999999999654 589999999975321 23345554 788999999999999987654
Q ss_pred ---eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 541 ---FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 541 ---~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
..++|||+|.++|.+++ . ..+++..+..++.||+.
T Consensus 101 ~~~~~~lv~e~~~~~l~~~~-----------~-------------------------------~~~~~~~~~~i~~qi~~ 138 (371)
T 2xrw_A 101 EFQDVYIVMELMDANLCQVI-----------Q-------------------------------MELDHERMSYLLYQMLC 138 (371)
T ss_dssp TCCEEEEEEECCSEEHHHHH-----------H-------------------------------SCCCHHHHHHHHHHHHH
T ss_pred cccceEEEEEcCCCCHHHHH-----------h-------------------------------hccCHHHHHHHHHHHHH
Confidence 78999997765543332 1 23677788999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHH
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSL 697 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSf 697 (753)
||+|||+.+|+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.+..++.++|||||
T Consensus 139 al~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 212 (371)
T 2xrw_A 139 GIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSV 212 (371)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEECTTSC--EEECCCCC--------------------CTTCCHHHHTTCCCCTTHHHHHH
T ss_pred HHHHHHHCCeecccCCHHHEEEcCCCC--EEEEEeeccccccccc----ccCCceecCCccCHHHhcCCCCCchHhHHHH
Confidence 999999999999999999999977764 9999999998764321 2234568999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCh
Q 004442 698 GCILFFCITGGKHPYGESF 716 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~~ 716 (753)
||++|||++| .+||.+..
T Consensus 213 G~il~el~~g-~~pf~~~~ 230 (371)
T 2xrw_A 213 GCIMGEMIKG-GVLFPGTD 230 (371)
T ss_dssp HHHHHHHHHS-SCSSCCSS
T ss_pred HHHHHHHHhC-CCCCCCCC
Confidence 9999999998 66776553
No 182
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-36 Score=328.68 Aligned_cols=233 Identities=24% Similarity=0.382 Sum_probs=175.8
Q ss_pred eecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCC----
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~---- 539 (753)
.+.++|.+.+.||+|+||.||+|.. .+|+.||||++..... ....+|+. +++.++||||+++++++...
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~ 100 (367)
T 1cm8_A 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR-LLKHMRHENVIGLLDVFTPDETLD 100 (367)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHH-HHHHCCBTTBCCCSEEECSCSSTT
T ss_pred eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHH-HHHhCCCcCCCCceeeEecCCccc
Confidence 3457899999999999999999976 4699999999964321 23345554 78999999999999998765
Q ss_pred --ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 540 --~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
...|+|||+|+ ++|.+++. ...+++..+..++.||++
T Consensus 101 ~~~~~~lv~e~~~-----------~~L~~~~~------------------------------~~~l~~~~~~~~~~qi~~ 139 (367)
T 1cm8_A 101 DFTDFYLVMPFMG-----------TDLGKLMK------------------------------HEKLGEDRIQFLVYQMLK 139 (367)
T ss_dssp TCCCCEEEEECCS-----------EEHHHHHH------------------------------HCCCCHHHHHHHHHHHHH
T ss_pred cCceEEEEEecCC-----------CCHHHHHh------------------------------cCCCCHHHHHHHHHHHHH
Confidence 34699999554 44444432 134677888999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHHH
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFS 696 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIwS 696 (753)
||+|||+.+|+||||||+|||++.++. +||+|||+++..... ....+||+.|+|||++.+ ..++.++||||
T Consensus 140 ~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~Diws 211 (367)
T 1cm8_A 140 GLRYIHAAGIIHRDLKPGNLAVNEDCE--LKILDFGLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWS 211 (367)
T ss_dssp HHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCSS------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHH
T ss_pred HHHHHHHCCccccCcCHHHEEEcCCCC--EEEEeeecccccccc------cCcCcCCCCcCCHHHHhCCCCCChhhhHHH
Confidence 999999999999999999999977754 999999999876432 234568999999999987 67999999999
Q ss_pred HHHHHHHHHhCCCCCCCCChH-HHHHHHHcc-------------------------------CcccccCCCHHHHHHHHH
Q 004442 697 LGCILFFCITGGKHPYGESFE-RDANIVKDR-------------------------------KDLFLVEHIPEAVDLFTR 744 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~~-~~~~~i~~~-------------------------------~~~~~~~~s~el~dLI~~ 744 (753)
|||++|||++| ++||.+... .....+... ........++++.+||++
T Consensus 212 lG~il~ell~g-~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 290 (367)
T 1cm8_A 212 VGCIMAEMITG-KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEK 290 (367)
T ss_dssp HHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHH
Confidence 99999999998 667765432 222211110 001234568899999999
Q ss_pred ccccCcCCC
Q 004442 745 LLDPNPDLR 753 (753)
Q Consensus 745 cL~~DP~~R 753 (753)
||..||++|
T Consensus 291 mL~~dP~~R 299 (367)
T 1cm8_A 291 MLVLDAEQR 299 (367)
T ss_dssp HSCSSTTTS
T ss_pred HccCChhHC
Confidence 999999998
No 183
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.6e-36 Score=324.92 Aligned_cols=250 Identities=23% Similarity=0.285 Sum_probs=191.9
Q ss_pred eecceEEEeEEecccCceEEEEEEe------eCCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCC
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~ 539 (753)
...++|.+.+.||+|+||.||++.. .+++.||||++..... ..+.+|+. +++.++||||+++++++.+.
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHH-HHhhCCCCCCCeEEEEEcCC
Confidence 3456789999999999999999863 3578999999965432 23344544 77889999999999999999
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
+..++||| |+++|+|.+++....... .....+++.++++++.|++.||
T Consensus 106 ~~~~lv~e----------~~~~~~L~~~l~~~~~~~----------------------~~~~~~~~~~~~~i~~qi~~al 153 (327)
T 2yfx_A 106 LPRFILME----------LMAGGDLKSFLRETRPRP----------------------SQPSSLAMLDLLHVARDIACGC 153 (327)
T ss_dssp SSCEEEEE----------CCTTEEHHHHHHHTSCCS----------------------SSTTSCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe----------cCCCCcHHHHHHhhcccc----------------------cccccccHHHHHHHHHHHHHHH
Confidence 99999999 666788888876543211 1124578889999999999999
Q ss_pred HHhhhCCccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 620 SHLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 620 ~yLH~~~IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
.|||+.+|+||||||+|||++.++ ...+||+|||+++....... ........||+.|+|||++.+..++.++||||||
T Consensus 154 ~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 232 (327)
T 2yfx_A 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 232 (327)
T ss_dssp HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred HHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccc-cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHH
Confidence 999999999999999999997543 34699999999986543221 1122334578999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCChHH-HHHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGESFER-DANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~~~-~~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++|||+|++.+||...... ....+.. .....+..+++++.++|.+||+.||++|
T Consensus 233 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 289 (327)
T 2yfx_A 233 VLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289 (327)
T ss_dssp HHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhC
Confidence 99999999447888765433 3333333 3344567789999999999999999998
No 184
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.3e-36 Score=323.09 Aligned_cols=239 Identities=23% Similarity=0.298 Sum_probs=182.4
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcE----EEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRS----VAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~----VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
.++|.+.+.||+|+||+||+|... +++. ||+|.+.... .....+|+ .+++.++||||++++++|.+.. .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA-YVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHH-HHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHH-HHHHhCCCCCeeEEEEEEecCC-c
Confidence 467899999999999999999754 3443 5777775322 23344455 4789999999999999998765 7
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++++| |+.+|+|.+++... ...+++..+++++.||+.||.||
T Consensus 92 ~~v~~----------~~~~g~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~aL~~L 133 (327)
T 3lzb_A 92 QLITQ----------LMPFGCLLDYVREH----------------------------KDNIGSQYLLNWCVQIAKGMNYL 133 (327)
T ss_dssp EEEEC----------CCSSCBHHHHHHHT----------------------------TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEE----------ecCCCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 88899 77788888887543 23578889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
|+.+|+||||||+|||++.++. +||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|
T Consensus 134 H~~~ivH~Dikp~NIl~~~~~~--~kL~DfG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ 210 (327)
T 3lzb_A 134 EDRRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGAEEKE-YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210 (327)
T ss_dssp HHTTCCCSCCCGGGEEEEETTE--EEECCTTC-----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred hhCCCcCCCCCHHHEEEcCCCC--EEEccCcceeEccCcccc-ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHH
Confidence 9999999999999999987764 999999999876543221 1222344688999999999999999999999999999
Q ss_pred HHHhCCCCCCCCChHHH-HHHHHc-cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFERD-ANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~~~-~~~i~~-~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++++.+||....... ...+.. .....+..+++++.++|.+||..||++|
T Consensus 211 ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 263 (327)
T 3lzb_A 211 ELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSR 263 (327)
T ss_dssp HHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHC
Confidence 99993378887764433 333333 3345667788999999999999999998
No 185
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.6e-36 Score=331.01 Aligned_cols=240 Identities=23% Similarity=0.346 Sum_probs=181.5
Q ss_pred eecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeeccccc-----------
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVES----------- 537 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~----------- 537 (753)
...++|.+.+.||+|+||+||+|.. .+|+.||||++..... ...+|+. +++.++|+||+++++++.
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-YKNRELD-IMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-SCCHHHH-HHTTCCCTTBCCEEEEEEEC---------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-hHHHHHH-HHHHcCCCCccchhheeeecCcccccccc
Confidence 3456799999999999999999965 5699999999865432 2234555 779999999999999983
Q ss_pred ---------------------------CCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccc
Q 004442 538 ---------------------------DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590 (753)
Q Consensus 538 ---------------------------~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~ 590 (753)
+....++|||||+++ |.+.+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~-----------L~~~l~~~~------------------ 132 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDT-----------LHKVLKSFI------------------ 132 (383)
T ss_dssp ----------------------------CCEEEEEECCCSEE-----------HHHHHHHHH------------------
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCCcc-----------HHHHHHHHH------------------
Confidence 344589999966544 444443221
Q ss_pred cchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCcc
Q 004442 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT 670 (753)
Q Consensus 591 ~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~ 670 (753)
.....+++..+..++.||++||+|||+.+|+||||||+|||++.++ ..+||+|||+++...... ....
T Consensus 133 -------~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~-~~~kl~Dfg~a~~~~~~~----~~~~ 200 (383)
T 3eb0_A 133 -------RSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD-NTLKLCDFGSAKKLIPSE----PSVA 200 (383)
T ss_dssp -------HTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTT-TEEEECCCTTCEECCTTS----CCCC
T ss_pred -------hcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCC-CcEEEEECCCCcccCCCC----CCcC
Confidence 1235688999999999999999999999999999999999997422 359999999999765432 2234
Q ss_pred CCCCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHc-c---------------------
Q 004442 671 GYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKD-R--------------------- 726 (753)
Q Consensus 671 ~~GT~~Y~APE~l~~~~-~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~-~~~~i~~-~--------------------- 726 (753)
..||+.|+|||++.+.. ++.++|||||||++|||++| .+||.+.... ....+.. .
T Consensus 201 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~ 279 (383)
T 3eb0_A 201 YICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG-KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFP 279 (383)
T ss_dssp CCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCC
T ss_pred cccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCC
Confidence 56899999999988754 89999999999999999998 6677654322 2222111 0
Q ss_pred -------CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 727 -------KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 727 -------~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
...++...++++.+||.+||+.||++|
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 280 TLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp CCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred ccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 011345578899999999999999998
No 186
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=329.08 Aligned_cols=240 Identities=15% Similarity=0.204 Sum_probs=185.5
Q ss_pred cceEEEeEEecccCceEEEEEEeeC---------CcEEEEEEeecCCchHHHHHHHHHHHhCCCCceee-----------
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYE---------GRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVR----------- 531 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~---------g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~----------- 531 (753)
+++|.+.+.||+|+||.||++.... ++.||||.+... +...+|+. ++..++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQN-FFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHH-HHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHH-HHHHhcccchhhhhhhhccCCcc
Confidence 5789999999999999999997763 889999999765 34556665 778889999988
Q ss_pred ----ecccccC-CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHH
Q 004442 532 ----WYGVESD-QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSA 606 (753)
Q Consensus 532 ----L~g~~~~-~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 606 (753)
+++++.. .+..++||| |+ +|+|.+++... ....+++.
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e----------~~-~~~L~~~l~~~---------------------------~~~~l~~~ 159 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLP----------SL-GRSLQSALDVS---------------------------PKHVLSER 159 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEE----------CC-CEEHHHHHHHS---------------------------GGGCCCHH
T ss_pred CccchhhccccCCcEEEEEec----------CC-CcCHHHHHHhC---------------------------CcCCCCHH
Confidence 4556554 678999999 55 66777766532 12468889
Q ss_pred HHHHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcc----cccCccCCCCcccccccc
Q 004442 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC----LTQNATGYGSSGWQAPEQ 682 (753)
Q Consensus 607 ~~l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~----~~~~~~~~GT~~Y~APE~ 682 (753)
++++|+.||+.||+|||+.+|+||||||+|||++.++...+||+|||+++........ ........||+.|+|||+
T Consensus 160 ~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 239 (352)
T 2jii_A 160 SVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDL 239 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHH
Confidence 9999999999999999999999999999999998776346999999999876532211 111233479999999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHH---HccCcccc------cCCCHHHHHHHHHccccCc
Q 004442 683 LLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF---ERDANIV---KDRKDLFL------VEHIPEAVDLFTRLLDPNP 750 (753)
Q Consensus 683 l~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~---~~~~~~i---~~~~~~~~------~~~s~el~dLI~~cL~~DP 750 (753)
+.+..++.++|||||||++|||+|| ..||.... ....... ......+. ..+++++.+||.+||+.||
T Consensus 240 ~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 318 (352)
T 2jii_A 240 HKGCGPSRRSDLQSLGYCMLKWLYG-FLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTY 318 (352)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHHHS-CCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCT
T ss_pred HccCCCCchhhHHHHHHHHHHHHhC-CCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCCh
Confidence 9999999999999999999999998 67886542 1121111 11222222 2568999999999999999
Q ss_pred CCC
Q 004442 751 DLR 753 (753)
Q Consensus 751 ~~R 753 (753)
++|
T Consensus 319 ~~R 321 (352)
T 2jii_A 319 EEK 321 (352)
T ss_dssp TCC
T ss_pred hhC
Confidence 998
No 187
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.3e-35 Score=313.52 Aligned_cols=237 Identities=26% Similarity=0.358 Sum_probs=185.4
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccC----C
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD----Q 539 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~----~ 539 (753)
...++.|.+.+.||+|+||.||+|... ++..||+|.+..... ...+.++..+++.++||||+++++++.+ .
T Consensus 22 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (290)
T 1t4h_A 22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101 (290)
T ss_dssp CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC
T ss_pred ccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCC
Confidence 445667899999999999999999764 588999999865321 1233334457899999999999998754 4
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
...++||| |+++|+|.+++... ..+++..++.++.|++.||
T Consensus 102 ~~~~lv~e----------~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi~~~l 142 (290)
T 1t4h_A 102 KCIVLVTE----------LMTSGTLKTYLKRF-----------------------------KVMKIKVLRSWCRQILKGL 142 (290)
T ss_dssp EEEEEEEE----------CCCSCBHHHHHHHH-----------------------------SSCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEE----------ecCCCCHHHHHHHc-----------------------------cCCCHHHHHHHHHHHHHHH
Confidence 66899999 66778888877432 3577888999999999999
Q ss_pred HHhhhCC--ccccCCCCCcEEEe-cCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHH
Q 004442 620 SHLHEIG--LIHRDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFS 696 (753)
Q Consensus 620 ~yLH~~~--IiHrDLKp~NILL~-~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwS 696 (753)
.|||+.+ |+||||||+||+++ .++ .+||+|||++...... ......||+.|+|||++. ..++.++||||
T Consensus 143 ~~lH~~~~~i~H~dikp~Nil~~~~~~--~~kl~Dfg~~~~~~~~-----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~s 214 (290)
T 1t4h_A 143 QFLHTRTPPIIHRDLKCDNIFITGPTG--SVKIGDLGLATLKRAS-----FAKAVIGTPEFMAPEMYE-EKYDESVDVYA 214 (290)
T ss_dssp HHHHTSSSCCCCSCCCGGGEEESSTTS--CEEECCTTGGGGCCTT-----SBEESCSSCCCCCGGGGG-TCCCTHHHHHH
T ss_pred HHHHcCCCCEEECCCCHHHEEEECCCC--CEEEeeCCCccccccc-----ccccccCCcCcCCHHHHh-ccCCCcchHHH
Confidence 9999999 99999999999996 444 5999999999755432 123346899999999886 45999999999
Q ss_pred HHHHHHHHHhCCCCCCCCChH--HHHHHHHcc--CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 697 LGCILFFCITGGKHPYGESFE--RDANIVKDR--KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~~--~~~~~i~~~--~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++|+|++| ..||..... .....+... ....+...++++.+||.+||+.||++|
T Consensus 215 lG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 274 (290)
T 1t4h_A 215 FGMCMLEMATS-EYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 274 (290)
T ss_dssp HHHHHHHHHHS-SCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHHHHHhC-CCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhC
Confidence 99999999998 667765322 222223222 223455677899999999999999998
No 188
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-36 Score=325.01 Aligned_cols=242 Identities=28% Similarity=0.407 Sum_probs=182.3
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHH-HhCCCCceeeecccccCC----ceEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLI-ASDQHPNIVRWYGVESDQ----DFVY 543 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll-~~l~HpNIV~L~g~~~~~----~~~~ 543 (753)
..+.++|.+.+.||+|+||.||++.. .|+.||||++.........+|.+.+. ..++|+||+++++++.+. ...+
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred cccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 45567899999999999999999876 48999999997766555555554222 235999999999998876 7899
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.++++. ..+++..+++++.|++.||+|||
T Consensus 112 lv~e----------~~~~g~L~~~l~~------------------------------~~~~~~~~~~i~~~i~~~l~~lH 151 (337)
T 3mdy_A 112 LITD----------YHENGSLYDYLKS------------------------------TTLDAKSMLKLAYSSVSGLCHLH 151 (337)
T ss_dssp EEEC----------CCTTCBHHHHHHH------------------------------CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------ccCCCcHHHHhhc------------------------------cCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 7777888887742 24678889999999999999999
Q ss_pred hC--------CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc-ccCccCCCCccccccccccCCCCCch---
Q 004442 624 EI--------GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL-TQNATGYGSSGWQAPEQLLQGRQTRA--- 691 (753)
Q Consensus 624 ~~--------~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~t~k--- 691 (753)
+. +|+||||||+|||++.++. +||+|||+++......... .......||+.|+|||++.+...+.+
T Consensus 152 ~~~~~~~~~~~ivH~Dikp~Nill~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 229 (337)
T 3mdy_A 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQS 229 (337)
T ss_dssp SCBCSTTCBCCEECSCCCGGGEEECTTSC--EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHH
T ss_pred HhhhhhccCCCEEecccchHHEEECCCCC--EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccC
Confidence 98 9999999999999977754 9999999998765432221 12234579999999999988776554
Q ss_pred ---hhHHHHHHHHHHHHhCC---------CCCCCCC------hHHHHHHHHc--cCccccc-----CCCHHHHHHHHHcc
Q 004442 692 ---IDLFSLGCILFFCITGG---------KHPYGES------FERDANIVKD--RKDLFLV-----EHIPEAVDLFTRLL 746 (753)
Q Consensus 692 ---sDIwSfGvvL~EllTG~---------~~Pf~~~------~~~~~~~i~~--~~~~~~~-----~~s~el~dLI~~cL 746 (753)
+|||||||++|||+||. ..||... .......+.. .....+. .+++++.+||.+||
T Consensus 230 ~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 309 (337)
T 3mdy_A 230 YIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECW 309 (337)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHS
T ss_pred ccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhh
Confidence 99999999999999983 3455432 1111111111 1122222 44567999999999
Q ss_pred ccCcCCC
Q 004442 747 DPNPDLR 753 (753)
Q Consensus 747 ~~DP~~R 753 (753)
+.||++|
T Consensus 310 ~~dP~~R 316 (337)
T 3mdy_A 310 AHNPASR 316 (337)
T ss_dssp CSSGGGS
T ss_pred hhChhhC
Confidence 9999998
No 189
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.2e-35 Score=322.44 Aligned_cols=240 Identities=22% Similarity=0.349 Sum_probs=182.0
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCC----
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~---- 539 (753)
..+.++|.+.+.||+|+||.||++... +|+.||||++...... ...+|+. +++.++||||+++++++...
T Consensus 7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 85 (353)
T 2b9h_A 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK-ILKHFKHENIITIFNIQRPDSFEN 85 (353)
T ss_dssp CCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHH-HHHHCCCTTBCCEEEECCCSCSTT
T ss_pred cccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHH-HHHhCcCCCcCCeeeeecccccCc
Confidence 345678999999999999999999765 5899999999654322 2345554 78899999999999987654
Q ss_pred -ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 540 -DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 540 -~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
...++|||+|.++ |.+++. ...+++..+..++.|++.|
T Consensus 86 ~~~~~lv~e~~~~~-----------L~~~~~------------------------------~~~~~~~~~~~~~~qi~~~ 124 (353)
T 2b9h_A 86 FNEVYIIQELMQTD-----------LHRVIS------------------------------TQMLSDDHIQYFIYQTLRA 124 (353)
T ss_dssp CCCEEEEECCCSEE-----------HHHHHH------------------------------HCCCCHHHHHHHHHHHHHH
T ss_pred cceEEEEEeccCcc-----------HHHHHh------------------------------hcCCCHHHHHHHHHHHHHH
Confidence 6789999966544 444332 1357788899999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccc-------cCccCCCCccccccccccC-CCCCc
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT-------QNATGYGSSGWQAPEQLLQ-GRQTR 690 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~-------~~~~~~GT~~Y~APE~l~~-~~~t~ 690 (753)
|+|||+.+|+||||||+|||++.++. +||+|||+++.......... .....+||+.|+|||++.+ ..++.
T Consensus 125 L~~LH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 202 (353)
T 2b9h_A 125 VKVLHGSNVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSR 202 (353)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTTCC--EEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCH
T ss_pred HHHHHHCCeecCCCCHHHeEEcCCCc--EEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccc
Confidence 99999999999999999999977755 99999999987753221111 1233468999999998765 67899
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHc------------------------cC--------cccccCCCHH
Q 004442 691 AIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKD------------------------RK--------DLFLVEHIPE 737 (753)
Q Consensus 691 ksDIwSfGvvL~EllTG~~~Pf~~~~~~~-~~~i~~------------------------~~--------~~~~~~~s~e 737 (753)
++|||||||++|||++| .+||.+..... ...+.. .. ......++++
T Consensus 203 ~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (353)
T 2b9h_A 203 AMDVWSCGCILAELFLR-RPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPK 281 (353)
T ss_dssp HHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHH
T ss_pred hhhHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHH
Confidence 99999999999999998 66776653322 111110 00 0112467889
Q ss_pred HHHHHHHccccCcCCC
Q 004442 738 AVDLFTRLLDPNPDLR 753 (753)
Q Consensus 738 l~dLI~~cL~~DP~~R 753 (753)
+.+||.+||+.||++|
T Consensus 282 ~~~li~~~L~~dP~~R 297 (353)
T 2b9h_A 282 GIDLLQRMLVFDPAKR 297 (353)
T ss_dssp HHHHHHHHSCSSGGGS
T ss_pred HHHHHHHhcCcCcccC
Confidence 9999999999999998
No 190
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.4e-36 Score=313.80 Aligned_cols=239 Identities=24% Similarity=0.374 Sum_probs=188.0
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC---chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E 547 (753)
.++|.+.+.||+|+||.||++... +++.||||++.... ....+.++..+++.++|+||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467899999999999999999765 68999999986432 12333344447899999999999999999999999999
Q ss_pred cccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 004442 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (753)
Q Consensus 548 ~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~I 627 (753)
|+.+|+|.+++.. ...+++..++.++.|++.||+|||+.+|
T Consensus 86 ----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i 126 (276)
T 2yex_A 86 ----------YCSGGELFDRIEP-----------------------------DIGMPEPDAQRFFHQLMAGVVYLHGIGI 126 (276)
T ss_dssp ----------CCTTEEGGGGSBT-----------------------------TTBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------ecCCCcHHHHHhh-----------------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 5556666665532 2347788999999999999999999999
Q ss_pred cccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-CchhhHHHHHHHHHHHHh
Q 004442 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCIT 706 (753)
Q Consensus 628 iHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDIwSfGvvL~EllT 706 (753)
+||||||+||+++.++. +||+|||++........ ........||+.|+|||++.+..+ +.++||||||+++|||++
T Consensus 127 ~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 203 (276)
T 2yex_A 127 THRDIKPENLLLDERDN--LKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203 (276)
T ss_dssp ECSCCSGGGEEECTTCC--EEECCCTTCEECEETTE-ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHH
T ss_pred eccCCChHHEEEccCCC--EEEeeCCCccccCCCcc-hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHh
Confidence 99999999999977765 99999999987643221 112234568999999999987775 789999999999999999
Q ss_pred CCCCCCCCChHH--HHHHHHccC--cccccCCCHHHHHHHHHccccCcCCC
Q 004442 707 GGKHPYGESFER--DANIVKDRK--DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 707 G~~~Pf~~~~~~--~~~~i~~~~--~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
| ..||...... ......... ......+++++.+||++||+.||++|
T Consensus 204 g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 253 (276)
T 2yex_A 204 G-ELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253 (276)
T ss_dssp S-SCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred C-CCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhC
Confidence 8 6788654322 222222222 22235678999999999999999998
No 191
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.9e-36 Score=323.53 Aligned_cols=243 Identities=23% Similarity=0.307 Sum_probs=186.7
Q ss_pred ceecceEEEe-EEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCce
Q 004442 469 RRIGKLVVFN-KEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (753)
Q Consensus 469 ~~i~~~~~i~-~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~ 541 (753)
+.+.+.|.+. +.||+|+||.||++... +|+.||||++.... .....+|+..+.....||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 4455667776 88999999999999765 58999999986432 23455666644344467999999999999999
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+.+|+|.+++... ....+++.+++.++.|++.||+|
T Consensus 104 ~~lv~e----------~~~~~~L~~~~~~~---------------------------~~~~~~~~~~~~i~~ql~~~L~~ 146 (327)
T 3lm5_A 104 IILILE----------YAAGGEIFSLCLPE---------------------------LAEMVSENDVIRLIKQILEGVYY 146 (327)
T ss_dssp EEEEEE----------CCTTEEGGGGGSSC---------------------------C-CCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEE----------ecCCCcHHHHHHHh---------------------------cccCCCHHHHHHHHHHHHHHHHH
Confidence 999999 66677777665321 12457889999999999999999
Q ss_pred hhhCCccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
||+.+|+||||||+|||++... ...+||+|||+++...... ......||+.|+|||++.+..++.++|||||||+
T Consensus 147 LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 222 (327)
T 3lm5_A 147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC----ELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222 (327)
T ss_dssp HHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred HHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc----ccccccCCcCccCCeeecCCCCCchhhHHHHHHH
Confidence 9999999999999999997611 2359999999998775332 1234568999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCChH-HHHHHHHccCc----ccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFE-RDANIVKDRKD----LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~-~~~~~i~~~~~----~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++| ..||..... .....+..... .....+++++.+||.+||+.||++|
T Consensus 223 l~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 279 (327)
T 3lm5_A 223 AYMLLTH-TSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKR 279 (327)
T ss_dssp HHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHhC-CCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhC
Confidence 9999999 567765533 33333333222 2334678999999999999999998
No 192
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=7.4e-36 Score=314.60 Aligned_cols=235 Identities=24% Similarity=0.407 Sum_probs=185.6
Q ss_pred ecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc----------hHHHHHHHHHHHhCCCCceeeecccccCC
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----------DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~----------~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~ 539 (753)
..++|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++|+||+++++++.+.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF-IMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHH-HHTTCCCTTBCCEEEEETTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHH-HHHhCCCCCchhhheeecCC
Confidence 346789999999999999999976 4689999999854321 23344554 78899999999999999776
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
. ++||| |+.+|+|.+++... ...+++..++.++.|++.||
T Consensus 96 ~--~lv~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~l~~~l 135 (287)
T 4f0f_A 96 P--RMVME----------FVPCGDLYHRLLDK----------------------------AHPIKWSVKLRLMLDIALGI 135 (287)
T ss_dssp T--EEEEE----------CCTTCBHHHHHHCT----------------------------TSCCCHHHHHHHHHHHHHHH
T ss_pred C--eEEEE----------ecCCCCHHHHHhcc----------------------------cCCccHHHHHHHHHHHHHHH
Confidence 6 69999 66678887776432 24578889999999999999
Q ss_pred HHhhhCC--ccccCCCCCcEEEecCCC---CeEEEEeccCceeccCCCcccccCccCCCCcccccccccc--CCCCCchh
Q 004442 620 SHLHEIG--LIHRDLKPQNVLISKDKS---FCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL--QGRQTRAI 692 (753)
Q Consensus 620 ~yLH~~~--IiHrDLKp~NILL~~d~~---~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~t~ks 692 (753)
+|||+.+ |+||||||+||+++.++. ..+||+|||+++..... .....||+.|+|||++. ...++.++
T Consensus 136 ~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~~~ 209 (287)
T 4f0f_A 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS------VSGLLGNFQWMAPETIGAEEESYTEKA 209 (287)
T ss_dssp HHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC------EECCCCCCTTSCGGGSSCSSCEECHHH
T ss_pred HHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc------ccccCCCccccCchhhccCCCCcCchh
Confidence 9999999 999999999999976542 34899999999854332 23356899999999984 45578999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHH--ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 693 DLFSLGCILFFCITGGKHPYGESFERD---ANIVK--DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 693 DIwSfGvvL~EllTG~~~Pf~~~~~~~---~~~i~--~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||||||++|||++| .+||....... ..... ......+..+++++.++|.+||+.||++|
T Consensus 210 Di~slG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 274 (287)
T 4f0f_A 210 DTYSFAMILYTILTG-EGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274 (287)
T ss_dssp HHHHHHHHHHHHHHS-SCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred hHHHHHHHHHHHHcC-CCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhC
Confidence 999999999999998 67886543221 12211 23345667789999999999999999998
No 193
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=5.1e-36 Score=332.54 Aligned_cols=243 Identities=26% Similarity=0.354 Sum_probs=184.6
Q ss_pred cccceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccC------C
Q 004442 466 VDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD------Q 539 (753)
Q Consensus 466 ~~~~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~------~ 539 (753)
..+.....+|.+.+.||+|+||+||+|....+..||+|++..... ...+|+. +++.++|+||+++++++.. .
T Consensus 33 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-~~~~E~~-il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-FKNRELQ-IMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp SSCCEEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-SCCHHHH-HHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred CCCCcccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-hHHHHHH-HHHhCCCCCcceEEEEEEecCCCCCc
Confidence 344566778999999999999999999888877899999865431 1224554 7899999999999999843 3
Q ss_pred ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 004442 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (753)
Q Consensus 540 ~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL 619 (753)
...++|||||.+++.+.+ .... .....+++..+..++.||++||
T Consensus 111 ~~~~lv~e~~~~~l~~~~-----------~~~~-------------------------~~~~~~~~~~~~~~~~qi~~aL 154 (394)
T 4e7w_A 111 VFLNLVLEYVPETVYRAS-----------RHYA-------------------------KLKQTMPMLLIKLYMYQLLRSL 154 (394)
T ss_dssp EEEEEEEECCSEEHHHHH-----------HHHH-------------------------HTTSCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEeeccCccHHHHH-----------HHHH-------------------------hhcCCCCHHHHHHHHHHHHHHH
Confidence 348899997765443222 1110 1235688889999999999999
Q ss_pred HHhhhCCccccCCCCCcEEEe-cCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC-CCCchhhHHHH
Q 004442 620 SHLHEIGLIHRDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG-RQTRAIDLFSL 697 (753)
Q Consensus 620 ~yLH~~~IiHrDLKp~NILL~-~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDIwSf 697 (753)
+|||+.+|+||||||+|||++ .++ .+||+|||+++...... ......||+.|+|||++.+. .++.++|||||
T Consensus 155 ~~LH~~~ivHrDlkp~Nill~~~~~--~~kL~DFG~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 228 (394)
T 4e7w_A 155 AYIHSIGICHRDIKPQNLLLDPPSG--VLKLIDFGSAKILIAGE----PNVSYICSRYYRAPELIFGATNYTTNIDIWST 228 (394)
T ss_dssp HHHHHTTEECSCCSGGGEEEETTTT--EEEECCCTTCEECCTTC----CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred HHHHHCCccCCCCCHHHEEEcCCCC--cEEEeeCCCcccccCCC----CCcccccCcCccCHHHHcCCCCCCcHHHHHHH
Confidence 999999999999999999997 444 59999999998775432 22345689999999998765 48999999999
Q ss_pred HHHHHHHHhCCCCCCCCChH-HHHHHHHcc-----------------------------CcccccCCCHHHHHHHHHccc
Q 004442 698 GCILFFCITGGKHPYGESFE-RDANIVKDR-----------------------------KDLFLVEHIPEAVDLFTRLLD 747 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~~~-~~~~~i~~~-----------------------------~~~~~~~~s~el~dLI~~cL~ 747 (753)
||++|||++| .+||.+... .....+... ...+....++++.+||.+||+
T Consensus 229 G~il~ell~g-~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 307 (394)
T 4e7w_A 229 GCVMAELMQG-QPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLE 307 (394)
T ss_dssp HHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred HHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhC
Confidence 9999999999 667765432 222211110 001233478899999999999
Q ss_pred cCcCCC
Q 004442 748 PNPDLR 753 (753)
Q Consensus 748 ~DP~~R 753 (753)
.||++|
T Consensus 308 ~dP~~R 313 (394)
T 4e7w_A 308 YTPSAR 313 (394)
T ss_dssp SSGGGS
T ss_pred CChhhC
Confidence 999998
No 194
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4.6e-37 Score=338.29 Aligned_cols=237 Identities=14% Similarity=0.123 Sum_probs=175.7
Q ss_pred ecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC------chHHHHHHH--HHHHhCCCCceeeecccc-----
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQ--NLIASDQHPNIVRWYGVE----- 536 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~------~~~~~~Ei~--~ll~~l~HpNIV~L~g~~----- 536 (753)
..+.|.+.+.||+|+||+||+|.. .+|+.||||++.... .+...+|+. .+++.++|||||++++.+
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 457899999999999999999986 469999999996431 123445553 345667899999999443
Q ss_pred --cCCc-----------------eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhh
Q 004442 537 --SDQD-----------------FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597 (753)
Q Consensus 537 --~~~~-----------------~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (753)
.+.+ ..||||| |+ +|+|.+++.......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E----------~~-~g~L~~~l~~~~~~~---------------------- 197 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYP----------RM-QSNLQTFGEVLLSHS---------------------- 197 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEE----------CC-SEEHHHHHHHHHHTT----------------------
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEe----------cc-CCCHHHHHHhccccc----------------------
Confidence 3332 2799999 44 356666665432110
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccc
Q 004442 598 WKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGW 677 (753)
Q Consensus 598 ~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y 677 (753)
.....+++..+++|+.||+.||+|||+.+|+||||||+|||++.++. +||+|||+++.... .....+| +.|
T Consensus 198 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~--~kL~DFG~a~~~~~------~~~~~~g-~~y 268 (377)
T 3byv_A 198 STHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG--VFLTGFEHLVRDGA------RVVSSVS-RGF 268 (377)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCGGGCEETTC------EEECCCC-TTC
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEEechhheecCC------cccCCCC-cCc
Confidence 01123455778899999999999999999999999999999987764 99999999986432 2234467 999
Q ss_pred cccccccCC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHcc
Q 004442 678 QAPEQLLQG-----------RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLL 746 (753)
Q Consensus 678 ~APE~l~~~-----------~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL 746 (753)
+|||++.+. .++.++|||||||++|||+|| .+||........ ..........+++++.+||.+||
T Consensus 269 ~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg-~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L 344 (377)
T 3byv_A 269 EPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA-DLPITKDAALGG---SEWIFRSCKNIPQPVRALLEGFL 344 (377)
T ss_dssp CCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS-SCCC------CC---SGGGGSSCCCCCHHHHHHHHHHT
T ss_pred cChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC-CCCCcccccccc---hhhhhhhccCCCHHHHHHHHHHc
Confidence 999999887 899999999999999999998 678865432211 01111223577899999999999
Q ss_pred ccCcCCC
Q 004442 747 DPNPDLR 753 (753)
Q Consensus 747 ~~DP~~R 753 (753)
+.||++|
T Consensus 345 ~~dp~~R 351 (377)
T 3byv_A 345 RYPKEDR 351 (377)
T ss_dssp CSSGGGC
T ss_pred CCCchhC
Confidence 9999998
No 195
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.3e-35 Score=312.15 Aligned_cols=237 Identities=22% Similarity=0.341 Sum_probs=188.3
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------------chHHHHHHHHHHHhC-CCCceeeeccc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------------HDVALKEIQNLIASD-QHPNIVRWYGV 535 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------------~~~~~~Ei~~ll~~l-~HpNIV~L~g~ 535 (753)
.+.++|.+.+.||+|+||.||++... +|+.||||++.... .+...+|+. ++..+ +||||++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD-ILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHH-HHHHHTTCTTBCCEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHH-HHHHhcCCCCEeeeeee
Confidence 44567899999999999999999765 58999999996542 122344555 55666 59999999999
Q ss_pred ccCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHH
Q 004442 536 ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (753)
Q Consensus 536 ~~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qI 615 (753)
+.+.+..++||| |+.+|+|.+++... ..+++..++.++.||
T Consensus 93 ~~~~~~~~lv~e----------~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~~~qi 133 (298)
T 1phk_A 93 YETNTFFFLVFD----------LMKKGELFDYLTEK-----------------------------VTLSEKETRKIMRAL 133 (298)
T ss_dssp EECSSEEEEEEE----------CCTTCBHHHHHHHH-----------------------------SSCCHHHHHHHHHHH
T ss_pred eccCCeEEEEEe----------ccCCCcHHHHHhcc-----------------------------CCCCHHHHHHHHHHH
Confidence 999999999999 66677888877432 357888999999999
Q ss_pred HHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc------CCCCC
Q 004442 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL------QGRQT 689 (753)
Q Consensus 616 a~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~t 689 (753)
+.||.|||+.+|+||||||+||+++.++. +||+|||++....... ......||+.|+|||++. ...++
T Consensus 134 ~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 207 (298)
T 1phk_A 134 LEVICALHKLNIVHRDLKPENILLDDDMN--IKLTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHPGYG 207 (298)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHHHCTTSCCBC
T ss_pred HHHHHHHHHCCcccCCCCcceEEEcCCCc--EEEecccchhhcCCCc----ccccccCCccccCHHHhccccccccccCC
Confidence 99999999999999999999999977765 9999999998765432 223456899999999985 45689
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 690 RAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 690 ~ksDIwSfGvvL~EllTG~~~Pf~~~~-~~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.++||||||+++|||++| ..||.... ......+...... ....+++++.+||.+||+.||++|
T Consensus 208 ~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 275 (298)
T 1phk_A 208 KEVDMWSTGVIMYTLLAG-SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 275 (298)
T ss_dssp THHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGS
T ss_pred cccccHhHHHHHHHHHHC-CCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccC
Confidence 999999999999999998 56665543 3333333333322 224678999999999999999998
No 196
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-36 Score=325.68 Aligned_cols=238 Identities=22% Similarity=0.277 Sum_probs=178.9
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC--------chHHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH--------HDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~--------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
...++|.+.+.||+|+||.||++... +|+.||||++.... .....+|+. +++.++||||+++++++.+.+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK-LLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHH-HHHHCCCTTBCCEEEEECCTT
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHH-HHhhCCCCCCCeEEEEEeeCC
Confidence 34567889999999999999999775 48999999986422 123455665 778999999999999999999
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++|||+|+++| .+++... ...+++..+..++.|++.||+
T Consensus 86 ~~~lv~e~~~~~l-----------~~~~~~~----------------------------~~~~~~~~~~~~~~qi~~~l~ 126 (346)
T 1ua2_A 86 NISLVFDFMETDL-----------EVIIKDN----------------------------SLVLTPSHIKAYMLMTLQGLE 126 (346)
T ss_dssp CCEEEEECCSEEH-----------HHHHTTC----------------------------CSSCCSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCH-----------HHHHHhc----------------------------CcCCCHHHHHHHHHHHHHHHH
Confidence 9999999666444 3333211 234667788999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC-CCCchhhHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG-RQTRAIDLFSLGC 699 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDIwSfGv 699 (753)
|||+.+|+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++.+. .++.++|||||||
T Consensus 127 ~lH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 201 (346)
T 1ua2_A 127 YLHQHWILHRDLKPNNLLLDENGV--LKLADFGLAKSFGSPN---RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 201 (346)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTCC--EEECCCGGGSTTTSCC---CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHH
T ss_pred HHHHCCEECCCCCHHHEEEcCCCC--EEEEecccceeccCCc---ccCCcccccccccCchHhhCCCCCCchhhhHhHHH
Confidence 999999999999999999977765 9999999998764322 222345689999999999764 4899999999999
Q ss_pred HHHHHHhCCCCCCCCChHH-HHHHHHcc-Ccc---------------------------cccCCCHHHHHHHHHccccCc
Q 004442 700 ILFFCITGGKHPYGESFER-DANIVKDR-KDL---------------------------FLVEHIPEAVDLFTRLLDPNP 750 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~~~~-~~~~i~~~-~~~---------------------------~~~~~s~el~dLI~~cL~~DP 750 (753)
++|||++| .+||...... ....+... ..+ .....++++.+||++||..||
T Consensus 202 il~ell~g-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 280 (346)
T 1ua2_A 202 ILAELLLR-VPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNP 280 (346)
T ss_dssp HHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSST
T ss_pred HHHHHHHC-CCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccCh
Confidence 99999998 6677665332 22222110 000 114557899999999999999
Q ss_pred CCC
Q 004442 751 DLR 753 (753)
Q Consensus 751 ~~R 753 (753)
++|
T Consensus 281 ~~R 283 (346)
T 1ua2_A 281 CAR 283 (346)
T ss_dssp TTS
T ss_pred hhC
Confidence 998
No 197
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.2e-35 Score=319.28 Aligned_cols=236 Identities=22% Similarity=0.296 Sum_probs=185.5
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCchHHHHHHHHHHHhCC-CCceeeecccccC--CceEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQ-HPNIVRWYGVESD--QDFVYL 544 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~-HpNIV~L~g~~~~--~~~~~L 544 (753)
....++|++.+.||+|+||+||++.. .+++.||||++.....+...+|+. ++..++ |+||+++++++.+ ....++
T Consensus 32 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~-~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 32 WGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK-ILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp CEEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHH-HHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred ccCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHH-HHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 34457899999999999999999965 568999999998776666777776 556665 9999999999987 677899
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++. .+++.++..++.||+.||+|||+
T Consensus 111 v~e----------~~~~~~l~~~~~--------------------------------~~~~~~~~~~~~qi~~~l~~lH~ 148 (330)
T 3nsz_A 111 VFE----------HVNNTDFKQLYQ--------------------------------TLTDYDIRFYMYEILKALDYCHS 148 (330)
T ss_dssp EEE----------CCCCCCHHHHGG--------------------------------GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe----------ccCchhHHHHHH--------------------------------hCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 666777776652 25667889999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIwSfGvvL~E 703 (753)
.+|+||||||+|||++.++ ..+||+|||+++...... ......||..|+|||++.+ ..++.++|||||||++||
T Consensus 149 ~~ivH~Dikp~Nil~~~~~-~~~kl~Dfg~a~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 223 (330)
T 3nsz_A 149 MGIMHRDVKPHNVMIDHEH-RKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 223 (330)
T ss_dssp TTEECCCCSGGGEEEETTT-TEEEECCCTTCEECCTTC----CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred CCeeeCCCCHHHEEEcCCC-CEEEEEeCCCceEcCCCC----ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHH
Confidence 9999999999999998665 269999999998765432 2234568999999999987 668999999999999999
Q ss_pred HHhCCCCCC-CCChH-HHHHH-------------HHccC------------------------cccccCCCHHHHHHHHH
Q 004442 704 CITGGKHPY-GESFE-RDANI-------------VKDRK------------------------DLFLVEHIPEAVDLFTR 744 (753)
Q Consensus 704 llTG~~~Pf-~~~~~-~~~~~-------------i~~~~------------------------~~~~~~~s~el~dLI~~ 744 (753)
|++|+ .|| ..... ..... +.... ......+++++.+||.+
T Consensus 224 ll~g~-~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 302 (330)
T 3nsz_A 224 MIFRK-EPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 302 (330)
T ss_dssp HHHTC-SSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHT
T ss_pred HHhCC-CCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHH
Confidence 99994 555 33221 11111 01000 01122368999999999
Q ss_pred ccccCcCCC
Q 004442 745 LLDPNPDLR 753 (753)
Q Consensus 745 cL~~DP~~R 753 (753)
||+.||++|
T Consensus 303 ~L~~dP~~R 311 (330)
T 3nsz_A 303 LLRYDHQSR 311 (330)
T ss_dssp TSCSSGGGS
T ss_pred HhcCCcccC
Confidence 999999998
No 198
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.9e-36 Score=325.92 Aligned_cols=238 Identities=23% Similarity=0.324 Sum_probs=188.4
Q ss_pred cceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
+....++|.+.+.||+|+||.||++... +++.||+|++...... ...+|+ .+++.++|+||+++++++.+++..
T Consensus 28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~ 106 (360)
T 3eqc_A 28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEI 106 (360)
T ss_dssp CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHH-GGGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHH-HHHHHCCCCCEEEEeEEEEECCEE
Confidence 3555678999999999999999999765 6899999999765322 233444 477889999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+.+|+|.+++... ..+++..+.+++.+++.||+||
T Consensus 107 ~lv~e----------~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~i~~~i~~~l~~l 147 (360)
T 3eqc_A 107 SICME----------HMDGGSLDQVLKKA-----------------------------GRIPEQILGKVSIAVIKGLTYL 147 (360)
T ss_dssp EEEEC----------CCTTCBHHHHHHHH-----------------------------SSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE----------CCCCCCHHHHHHHc-----------------------------CCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 66778888877432 3577888999999999999999
Q ss_pred hhC-CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHH
Q 004442 623 HEI-GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 623 H~~-~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL 701 (753)
|+. +|+||||||+|||++.++. +||+|||+++..... ......||+.|+|||++.+..++.++|||||||++
T Consensus 148 h~~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 220 (360)
T 3eqc_A 148 REKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 220 (360)
T ss_dssp HHHHCCCCSCCSGGGEEECTTCC--EEECCCCCCHHHHHH-----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHH
T ss_pred HHhCCEEcCCccHHHEEECCCCC--EEEEECCCCcccccc-----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHH
Confidence 996 9999999999999977765 999999999765321 22344689999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHH-------------------------------------------Hcc-Ccc-cccCCCH
Q 004442 702 FFCITGGKHPYGESFERDANIV-------------------------------------------KDR-KDL-FLVEHIP 736 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~~~~~~~i-------------------------------------------~~~-~~~-~~~~~s~ 736 (753)
|||+|| ..||........... ... ... ....+++
T Consensus 221 ~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
T 3eqc_A 221 VEMAVG-RYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 299 (360)
T ss_dssp HHHHHT-SCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCH
T ss_pred HHHHhC-CCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccH
Confidence 999999 667765433221111 111 111 1234688
Q ss_pred HHHHHHHHccccCcCCC
Q 004442 737 EAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 737 el~dLI~~cL~~DP~~R 753 (753)
++.+||++||+.||++|
T Consensus 300 ~~~~li~~~L~~dP~~R 316 (360)
T 3eqc_A 300 EFQDFVNKCLIKNPAER 316 (360)
T ss_dssp HHHHHHHHHHCSSTTTS
T ss_pred HHHHHHHHHhhcChhhC
Confidence 99999999999999998
No 199
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=324.87 Aligned_cols=239 Identities=22% Similarity=0.303 Sum_probs=177.4
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHH-HHHhCCCCceeeeccc-----ccCCceEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQN-LIASDQHPNIVRWYGV-----ESDQDFVYLS 545 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~-ll~~l~HpNIV~L~g~-----~~~~~~~~LV 545 (753)
.++|++.+.||+|+||.||+|.. +++.||||++..........|... .+..++|+||++++++ +.+....++|
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 46789999999999999999854 789999999986654444444331 2345899999999974 3345578999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.+++.. ...++..+++++.||+.||+|||+.
T Consensus 91 ~e----------~~~~g~L~~~l~~------------------------------~~~~~~~~~~i~~qi~~~L~~LH~~ 130 (336)
T 3g2f_A 91 ME----------YYPNGSLXKYLSL------------------------------HTSDWVSSCRLAHSVTRGLAYLHTE 130 (336)
T ss_dssp EC----------CCTTCBHHHHHHH------------------------------CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred Ee----------cCCCCcHHHHHhh------------------------------cccchhHHHHHHHHHHHHHHHHHhh
Confidence 99 7777888888743 2346778899999999999999999
Q ss_pred ---------CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCc-----ccccCccCCCCccccccccccC------
Q 004442 626 ---------GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS-----CLTQNATGYGSSGWQAPEQLLQ------ 685 (753)
Q Consensus 626 ---------~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~-----~~~~~~~~~GT~~Y~APE~l~~------ 685 (753)
+|+||||||+|||++.++ .+||+|||+++.+..... .........||+.|+|||++.+
T Consensus 131 ~~~~~~~~~~ivH~Dikp~Nill~~~~--~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 208 (336)
T 3g2f_A 131 LPRGDHYKPAISHRDLNSRNVLVKNDG--TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRD 208 (336)
T ss_dssp BCCGGGCBCCEECSSCSGGGEEECTTS--CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGG
T ss_pred hccccccccceeecccccceEEEcCCC--cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccc
Confidence 999999999999997765 499999999987754321 1122234569999999999987
Q ss_pred -CCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-----------------HHHHH-HH--ccCcccccC------CCHHH
Q 004442 686 -GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-----------------RDANI-VK--DRKDLFLVE------HIPEA 738 (753)
Q Consensus 686 -~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~-----------------~~~~~-i~--~~~~~~~~~------~s~el 738 (753)
..++.++|||||||++|||+||+.+||..... ..... .. .....++.. .++++
T Consensus 209 ~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (336)
T 3g2f_A 209 XESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSL 288 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHH
T ss_pred ccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHH
Confidence 35678999999999999999997766643210 01111 11 111222222 23479
Q ss_pred HHHHHHccccCcCCC
Q 004442 739 VDLFTRLLDPNPDLR 753 (753)
Q Consensus 739 ~dLI~~cL~~DP~~R 753 (753)
.+||.+||+.||++|
T Consensus 289 ~~li~~cl~~dP~~R 303 (336)
T 3g2f_A 289 KETIEDCWDQDAEAR 303 (336)
T ss_dssp HHHHHHHSCSSGGGS
T ss_pred HHHHHHHhcCChhhC
Confidence 999999999999998
No 200
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.2e-36 Score=325.33 Aligned_cols=238 Identities=25% Similarity=0.383 Sum_probs=177.1
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc--------------hHHHHHHHHHHHhCCCCceeeecc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--------------DVALKEIQNLIASDQHPNIVRWYG 534 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~--------------~~~~~Ei~~ll~~l~HpNIV~L~g 534 (753)
..+.+.|.+.+.||+|+||.||++...+|+.||||++..... +...+|+. +++.++||||+++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~ 96 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR-LLNHFHHPNILGLRD 96 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHH-HHHHCCCTTBCCCSE
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHH-HHHhCCCcCccceee
Confidence 456678999999999999999999888899999999854221 33445554 789999999999999
Q ss_pred ccc-----CCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHH
Q 004442 535 VES-----DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (753)
Q Consensus 535 ~~~-----~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 609 (753)
++. .....++|||+|.++|. +++.. ....+++..+.
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~~~l~-----------~~~~~----------------------------~~~~~~~~~~~ 137 (362)
T 3pg1_A 97 IFVHFEEPAMHKLYLVTELMRTDLA-----------QVIHD----------------------------QRIVISPQHIQ 137 (362)
T ss_dssp EEEECCTTTCCEEEEEEECCSEEHH-----------HHHHC----------------------------TTSCCCHHHHH
T ss_pred eEEeccCCCcceEEEEEccCCCCHH-----------HHHHh----------------------------cccCCCHHHHH
Confidence 983 34578999996665444 43321 12357888999
Q ss_pred HHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCC
Q 004442 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQ 688 (753)
Q Consensus 610 ~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~ 688 (753)
.++.||+.||.|||+.+|+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.+ ..+
T Consensus 138 ~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~ 211 (362)
T 3pg1_A 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND--ITICDFNLAREDTADA----NKTHYVTHRWYRAPELVMQFKGF 211 (362)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCTTC-------------------CGGGCCHHHHTTCTTC
T ss_pred HHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCC--EEEEecCccccccccc----ccceecccceecCcHHhcCCCCC
Confidence 99999999999999999999999999999977765 9999999998654321 2234468999999999887 678
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHc------------------------cC--------cccccCCC
Q 004442 689 TRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKD------------------------RK--------DLFLVEHI 735 (753)
Q Consensus 689 t~ksDIwSfGvvL~EllTG~~~Pf~~~~~-~~~~~i~~------------------------~~--------~~~~~~~s 735 (753)
+.++|||||||++|||++| .+||..... .....+.. .. .......+
T Consensus 212 ~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (362)
T 3pg1_A 212 TKLVDMWSAGCVMAEMFNR-KALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTAD 290 (362)
T ss_dssp CTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSC
T ss_pred CcHhHHHhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCC
Confidence 9999999999999999998 667765432 22221111 00 01234567
Q ss_pred HHHHHHHHHccccCcCCC
Q 004442 736 PEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 736 ~el~dLI~~cL~~DP~~R 753 (753)
+++.+||.+||+.||++|
T Consensus 291 ~~~~~li~~~L~~dP~~R 308 (362)
T 3pg1_A 291 PVALDLIAKMLEFNPQRR 308 (362)
T ss_dssp HHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHHhcCChhhC
Confidence 899999999999999998
No 201
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.9e-36 Score=320.47 Aligned_cols=257 Identities=21% Similarity=0.281 Sum_probs=192.8
Q ss_pred eecceEEEeEEecccCceEEEEEEe------eCCcEEEEEEeecCCch----HHHHHHHHHHHhC-CCCceeeecccccC
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHHD----VALKEIQNLIASD-QHPNIVRWYGVESD 538 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~------~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l-~HpNIV~L~g~~~~ 538 (753)
...++|.+.+.||+|+||.||++.. .+++.||||++...... ...+|+. ++..+ +||||++++++|.+
T Consensus 24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~~~~ 102 (316)
T 2xir_A 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK-ILIHIGHHLNVVNLLGACTK 102 (316)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEEECC
T ss_pred cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHH-HHHhcccCCCeeeEEEEEec
Confidence 3457899999999999999999964 34689999999765432 3445555 55555 79999999999877
Q ss_pred Cc-eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 539 QD-FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 539 ~~-~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
.+ ..++||| |+++|+|.+++........... ..........+++..++.++.|++.
T Consensus 103 ~~~~~~lv~e----------~~~~~~L~~~l~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~qi~~ 159 (316)
T 2xir_A 103 PGGPLMVIVE----------FCKFGNLSTYLRSKRNEFVPYK-------------VAPEDLYKDFLTLEHLICYSFQVAK 159 (316)
T ss_dssp TTSCCEEEEE----------CCTTEEHHHHHHTCTTSEECC--------------------CTTCEEHHHHHHHHHHHHH
T ss_pred CCCceEEEEE----------cCCCCcHHHHHHhccccccccc-------------ccchhhhccccCHHHHHHHHHHHHH
Confidence 54 5899999 6667788888765432111000 0000011234788899999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHH
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSL 697 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSf 697 (753)
||.|||+.+|+||||||+||+++.++. +||+|||+++........ .......||+.|+|||++.+..++.++|||||
T Consensus 160 al~~lH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 236 (316)
T 2xir_A 160 GMEFLASRKCIHRDLAARNILLSEKNV--VKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236 (316)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCCGGGSCTTTCTTS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred HHHHHHhCCcccccCccceEEECCCCC--EEECCCccccccccCccc-eeccCCCcceeecCchhhccccccchhHHHHH
Confidence 999999999999999999999976654 999999999876543221 12223457889999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCh--HHHHHHHH-ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 698 GCILFFCITGGKHPYGESF--ERDANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 698 GvvL~EllTG~~~Pf~~~~--~~~~~~i~-~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++|||+|++.+||.... ......+. ......+..+++++.++|.+||+.||++|
T Consensus 237 G~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 295 (316)
T 2xir_A 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 295 (316)
T ss_dssp HHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 9999999994477886643 22223333 33345567789999999999999999998
No 202
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.7e-36 Score=316.50 Aligned_cols=239 Identities=24% Similarity=0.343 Sum_probs=186.4
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC------c-hHHHHHHHHHHHhCCCCceeeecccc--cCCce
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------H-DVALKEIQNLIASDQHPNIVRWYGVE--SDQDF 541 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~------~-~~~~~Ei~~ll~~l~HpNIV~L~g~~--~~~~~ 541 (753)
.++|.+.+.||+|+||.||++... +++.||||++.... . ....+|+ .+++.++|+||+++++++ .+.+.
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEI-QLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHH-HHHTTCCCTTBCCEEEEEECC---C
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHH-HHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 456788899999999999999764 58999999996431 2 2334444 478999999999999998 44568
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++|||+|.++|. +++.. .....+++..+++++.||+.||.|
T Consensus 83 ~~lv~e~~~~~l~-----------~~~~~---------------------------~~~~~~~~~~~~~~~~qi~~al~~ 124 (305)
T 2wtk_C 83 MYMVMEYCVCGMQ-----------EMLDS---------------------------VPEKRFPVCQAHGYFCQLIDGLEY 124 (305)
T ss_dssp EEEEEECCSEEHH-----------HHHHH---------------------------STTCSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEehhccCCHH-----------HHHHh---------------------------CcccccCHHHHHHHHHHHHHHHHH
Confidence 8999996665443 33321 113457888999999999999999
Q ss_pred hhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC--CchhhHHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGC 699 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--t~ksDIwSfGv 699 (753)
||+.+|+||||||+||+++.++. +||+|||++......... .......||+.|+|||++.+... +.++||||||+
T Consensus 125 LH~~~i~H~dlkp~NIl~~~~~~--~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~ 201 (305)
T 2wtk_C 125 LHSQGIVHKDIKPGNLLLTTGGT--LKISALGVAEALHPFAAD-DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGV 201 (305)
T ss_dssp HHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTCSS-CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHH
T ss_pred HHHCCeeecCCCcccEEEcCCCc--EEeeccccccccCccccc-cccccCCCCCCCcChhhccCcccCCcchhhHHHHHH
Confidence 99999999999999999977765 999999999876532211 22234568999999999976543 78999999999
Q ss_pred HHHHHHhCCCCCCCCC-hHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 700 ILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 700 vL~EllTG~~~Pf~~~-~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||++| ..||... .......+.......+..+++++.+||++||+.||++|
T Consensus 202 il~~l~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 255 (305)
T 2wtk_C 202 TLYNITTG-LYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKR 255 (305)
T ss_dssp HHHHHHHS-SCSCCCSSHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHhC-CCCCCCchHHHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhC
Confidence 99999998 5677654 34444555666667778899999999999999999998
No 203
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8.6e-36 Score=317.90 Aligned_cols=241 Identities=22% Similarity=0.353 Sum_probs=178.1
Q ss_pred ecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
..++|.+.+.||+|+||.||++.. .+|+.||||++.... .....+|+ .+++.++|+||+++++++.+.+..+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEI-DLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHH-HHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 345799999999999999999876 569999999997522 12234444 4789999999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++..... ....+++..+++++.|++.||.|||
T Consensus 109 lv~e----------~~~~~~L~~~l~~~~~-------------------------~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 109 IVLE----------LADAGDLSRMIKHFKK-------------------------QKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp EEEE----------CCCSCBHHHHHHHHHH-------------------------TTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------cCCCCCHHHHHHHhcc-------------------------cccCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999 6667788877754321 2345788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
+.+|+||||||+||+++.++. +||+|||+++...... .......||+.|+|||++.+..++.++||||||+++||
T Consensus 154 ~~~i~H~dl~p~NIl~~~~~~--~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~ 228 (310)
T 2wqm_A 154 SRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKT---TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 228 (310)
T ss_dssp HTTCCCCCCCGGGEEECTTSC--EEECCC---------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred hCCeeCCCCcHHHEEEcCCCC--EEEEeccceeeecCCC---ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHH
Confidence 999999999999999977664 9999999998764322 11223458999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCh---HHHHHHHHccCc-c-cccCCCHHHHHHHHHccccCcCCC
Q 004442 704 CITGGKHPYGESF---ERDANIVKDRKD-L-FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 704 llTG~~~Pf~~~~---~~~~~~i~~~~~-~-~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|++| ..||.... ......+..... . ....+++++.++|.+||+.||++|
T Consensus 229 l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 282 (310)
T 2wqm_A 229 MAAL-QSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282 (310)
T ss_dssp HHHS-SCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHhC-CCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhC
Confidence 9999 55664432 122223333222 2 235678999999999999999998
No 204
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=335.09 Aligned_cols=243 Identities=23% Similarity=0.417 Sum_probs=187.3
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCc--e
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQD--F 541 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~--~ 541 (753)
....++|.+.+.||+|+||+||+|.... |+.||||++.... .+...+|+. +++.++||||+++++++.+.+ .
T Consensus 5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~~ 83 (396)
T 4eut_A 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE-VLKKLNHKNIVKLFAIEEETTTRH 83 (396)
T ss_dssp ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHH-HHHHCCCTTBCCEEEEEECTTTCC
T ss_pred CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHH-HHHhcCCCCCCeEEEeeccCCCCe
Confidence 3456789999999999999999997754 8999999997532 233445554 789999999999999987654 7
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+.+|+|.+++.... ....+++..++.++.||+.||+|
T Consensus 84 ~~lv~e----------~~~~g~L~~~l~~~~--------------------------~~~~l~~~~~~~i~~qi~~aL~~ 127 (396)
T 4eut_A 84 KVLIME----------FCPCGSLYTVLEEPS--------------------------NAYGLPESEFLIVLRDVVGGMNH 127 (396)
T ss_dssp EEEEEC----------CCTTEEHHHHTTSGG--------------------------GTTCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEe----------cCCCCCHHHHHHhhh--------------------------cccCCCHHHHHHHHHHHHHHHHH
Confidence 899999 777788888876432 12348889999999999999999
Q ss_pred hhhCCccccCCCCCcEEEe--cCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC--------CCCCch
Q 004442 622 LHEIGLIHRDLKPQNVLIS--KDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ--------GRQTRA 691 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~--~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--------~~~t~k 691 (753)
||+.+|+||||||+|||+. .++...+||+|||+++..... .......||+.|+|||++.+ ..++.+
T Consensus 128 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~ 203 (396)
T 4eut_A 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD----EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGAT 203 (396)
T ss_dssp HHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG----GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHH
T ss_pred HHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC----CccccccCCccccCHHHhhccccccccccCCCcH
Confidence 9999999999999999982 233456999999999876543 22234568999999999865 567889
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHccCcc-------------------------cccCCCHHHHHH
Q 004442 692 IDLFSLGCILFFCITGGKHPYGES-----FERDANIVKDRKDL-------------------------FLVEHIPEAVDL 741 (753)
Q Consensus 692 sDIwSfGvvL~EllTG~~~Pf~~~-----~~~~~~~i~~~~~~-------------------------~~~~~s~el~dL 741 (753)
+|||||||++|||+|| ..||... .......+....+. .....++.+.++
T Consensus 204 ~DiwSlG~il~el~tg-~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l 282 (396)
T 4eut_A 204 VDLWSIGVTFYHAATG-SLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPV 282 (396)
T ss_dssp HHHHHHHHHHHHHHHS-SCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC-CCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHH
Confidence 9999999999999998 6677421 22223333222211 112234578899
Q ss_pred HHHccccCcCCC
Q 004442 742 FTRLLDPNPDLR 753 (753)
Q Consensus 742 I~~cL~~DP~~R 753 (753)
|.+||+.||++|
T Consensus 283 l~~~L~~dP~~R 294 (396)
T 4eut_A 283 LANILEADQEKC 294 (396)
T ss_dssp HHHHSCCCTTTS
T ss_pred HHHhhccChhhh
Confidence 999999999998
No 205
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.2e-36 Score=351.74 Aligned_cols=233 Identities=24% Similarity=0.343 Sum_probs=182.4
Q ss_pred eEEecccCceEEEEEEee---CCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEccc
Q 004442 478 NKEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (753)
Q Consensus 478 ~~~IG~G~fG~Vyka~~~---~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~c 549 (753)
.+.||+|+||.||+|... .++.||||+++.... +.+.+|+. +++.++|||||+++++|.+ +..++|||
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~-~~~~lv~E-- 449 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN-VMQQLDNPYIVRMIGICEA-ESWMLVME-- 449 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHH-HHHHCCCTTBCCEEEEEES-SSEEEEEE--
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEec-CCEEEEEE--
Confidence 357999999999998543 468999999975321 23445554 8899999999999999965 45889999
Q ss_pred cCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccc
Q 004442 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (753)
Q Consensus 550 ~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiH 629 (753)
|+.+|+|.+++.. ...+++.+++.|+.||+.||+|||+.+|+|
T Consensus 450 --------~~~~g~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiH 492 (635)
T 4fl3_A 450 --------MAELGPLNKYLQQ-----------------------------NRHVKDKNIIELVHQVSMGMKYLEESNFVH 492 (635)
T ss_dssp --------CCTTEEHHHHHHH-----------------------------CTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred --------ccCCCCHHHHHhh-----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeC
Confidence 7778888888743 235788899999999999999999999999
Q ss_pred cCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 004442 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGK 709 (753)
Q Consensus 630 rDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~ 709 (753)
|||||+|||++.++ .+||+|||+++................+|+.|+|||++.+..++.++|||||||++|||+|++.
T Consensus 493 rDLkp~NILl~~~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~ 570 (635)
T 4fl3_A 493 RDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 570 (635)
T ss_dssp SCCSGGGEEEEETT--EEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCChHhEEEeCCC--CEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 99999999998775 5999999999877544332233334457889999999999999999999999999999999337
Q ss_pred CCCCCChHH-HHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 710 HPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 710 ~Pf~~~~~~-~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.||.+.... ....+... ....+..+++++.+||.+||+.||++|
T Consensus 571 ~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~R 616 (635)
T 4fl3_A 571 KPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 616 (635)
T ss_dssp CSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHC
Confidence 788765443 33444433 345677889999999999999999998
No 206
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.5e-36 Score=321.35 Aligned_cols=236 Identities=25% Similarity=0.354 Sum_probs=179.0
Q ss_pred cceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCCch----H-HHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD----V-ALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~~~----~-~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
.++|++.+.||+|+||.||++.... |+.||||++...... . ..+|+ .+++.++||||++++++|.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREI-KLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHH-HHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3678999999999999999997754 899999998654322 2 23444 478999999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
||+| .+|+|.+++. ....+++..+.+++.|++.||+|||+.
T Consensus 103 ~e~~----------~~~~l~~~~~-----------------------------~~~~~~~~~~~~~~~qi~~~l~~LH~~ 143 (331)
T 4aaa_A 103 FEFV----------DHTILDDLEL-----------------------------FPNGLDYQVVQKYLFQIINGIGFCHSH 143 (331)
T ss_dssp EECC----------SEEHHHHHHH-----------------------------STTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecC----------CcchHHHHHh-----------------------------hccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9954 4555555432 124578889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC-CCCchhhHHHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDIwSfGvvL~El 704 (753)
+|+||||||+||+++.++. +||+|||+++...... .......||+.|+|||++.+. .++.++|||||||++|||
T Consensus 144 ~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 218 (331)
T 4aaa_A 144 NIIHRDIKPENILVSQSGV--VKLCDFGFARTLAAPG---EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218 (331)
T ss_dssp TCCCCCCCGGGEEECTTSC--EEECCCTTC---------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHH
T ss_pred CEEccCcChheEEEcCCCc--EEEEeCCCceeecCCc---cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHH
Confidence 9999999999999977764 9999999998765322 122344689999999999876 689999999999999999
Q ss_pred HhCCCCCCCCChHHH-HHHHHcc-C------------------------------cccccCCCHHHHHHHHHccccCcCC
Q 004442 705 ITGGKHPYGESFERD-ANIVKDR-K------------------------------DLFLVEHIPEAVDLFTRLLDPNPDL 752 (753)
Q Consensus 705 lTG~~~Pf~~~~~~~-~~~i~~~-~------------------------------~~~~~~~s~el~dLI~~cL~~DP~~ 752 (753)
++| .+||....... ...+... . ......+++++.+||.+||+.||++
T Consensus 219 ~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 297 (331)
T 4aaa_A 219 FMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDK 297 (331)
T ss_dssp HHS-SCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred HhC-CCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCccc
Confidence 999 66776553322 1111100 0 0011356889999999999999999
Q ss_pred C
Q 004442 753 R 753 (753)
Q Consensus 753 R 753 (753)
|
T Consensus 298 R 298 (331)
T 4aaa_A 298 R 298 (331)
T ss_dssp S
T ss_pred C
Confidence 8
No 207
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.3e-36 Score=325.14 Aligned_cols=244 Identities=20% Similarity=0.260 Sum_probs=193.2
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc--------------------hHHHHHHHHHHHhCCCCc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--------------------DVALKEIQNLIASDQHPN 528 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~--------------------~~~~~Ei~~ll~~l~HpN 528 (753)
....++|.+.+.||+|+||.||++.. +|+.||||++..... +...+|+. +++.++|||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~ 104 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ-IITDIKNEY 104 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHH-HHTTCCCTT
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHH-HHHhCCCCC
Confidence 44557899999999999999999988 999999999964311 34455554 789999999
Q ss_pred eeeecccccCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHH
Q 004442 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQL 608 (753)
Q Consensus 529 IV~L~g~~~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 608 (753)
|+++++++.+.+..++||| |+++|+|.+++.....-. ......+++..+
T Consensus 105 i~~~~~~~~~~~~~~lv~e----------~~~~~~L~~~~~~~~~l~---------------------~~~~~~~~~~~~ 153 (348)
T 2pml_X 105 CLTCEGIITNYDEVYIIYE----------YMENDSILKFDEYFFVLD---------------------KNYTCFIPIQVI 153 (348)
T ss_dssp BCCCSEEEESSSEEEEEEE----------CCTTCBSSEESSSEESSC---------------------SSSCCCCCHHHH
T ss_pred cceEEEEEeeCCeEEEEEe----------ccCCCcHHHHHHHhhhhh---------------------hccccCCCHHHH
Confidence 9999999999999999999 666677766532110000 011356889999
Q ss_pred HHHHHHHHHHHHHhhh-CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC-
Q 004442 609 LKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG- 686 (753)
Q Consensus 609 l~Ia~qIa~gL~yLH~-~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~- 686 (753)
+.++.|++.||.|||+ .+|+||||||+||+++.++. +||+|||++...... ......||..|+|||++.+.
T Consensus 154 ~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~ 226 (348)
T 2pml_X 154 KCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR--VKLSDFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNES 226 (348)
T ss_dssp HHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSC--EEECCCTTCEECBTT-----EECSSCSCGGGCCGGGGSSCC
T ss_pred HHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCc--EEEeccccccccccc-----cccCCCCCcCccCchhhcCCC
Confidence 9999999999999999 99999999999999977764 999999999876543 22345689999999999887
Q ss_pred CCCc-hhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHccCcccc-------------------cCCCHHHHHHHHH
Q 004442 687 RQTR-AIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDRKDLFL-------------------VEHIPEAVDLFTR 744 (753)
Q Consensus 687 ~~t~-ksDIwSfGvvL~EllTG~~~Pf~~~~--~~~~~~i~~~~~~~~-------------------~~~s~el~dLI~~ 744 (753)
.++. ++|||||||++|||++| .+||.... ......+.......+ ..+++++.+||.+
T Consensus 227 ~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 305 (348)
T 2pml_X 227 SYNGAKVDIWSLGICLYVMFYN-VVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKL 305 (348)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHS-SCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHH
T ss_pred CCCcchhhHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHH
Confidence 5665 99999999999999998 66776543 344444544444444 5678999999999
Q ss_pred ccccCcCCC
Q 004442 745 LLDPNPDLR 753 (753)
Q Consensus 745 cL~~DP~~R 753 (753)
||+.||++|
T Consensus 306 ~L~~dP~~R 314 (348)
T 2pml_X 306 FLRKNPAER 314 (348)
T ss_dssp HCCSSGGGS
T ss_pred HccCChhhC
Confidence 999999998
No 208
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-36 Score=320.97 Aligned_cols=241 Identities=26% Similarity=0.357 Sum_probs=190.0
Q ss_pred ecceEEEeEEecccCceEEEEEE-----eeCCcEEEEEEeecCCch---HHHHHHHHHHHhCCCCceeeecccccCCc--
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESDQD-- 540 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~-----~~~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~-- 540 (753)
..+.|++.+.||+|+||.||++. ..+|+.||||++...... ...+|+ .+++.++|+||+++++++.+.+
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI-EILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHH-HHHHTCCCTTBCCEEEEECC----
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHH-HHHHhCCCCCeeeEEEEEEecCCC
Confidence 45678999999999999999987 346899999999764432 334444 4789999999999999987654
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++||| |+++|+|.+++... ...+++.++++++.|++.||+
T Consensus 118 ~~~lv~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~aL~ 159 (326)
T 2w1i_A 118 NLKLIME----------YLPYGSLRDYLQKH----------------------------KERIDHIKLLQYTSQICKGME 159 (326)
T ss_dssp CCEEEEC----------CCTTCBHHHHHHHS----------------------------TTSSCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEE----------CCCCCCHHHHHHhc----------------------------ccCCCHHHHHHHHHHHHHHHH
Confidence 6899999 67778888877532 134778889999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
|||+.+|+||||||+||+++.++. +||+|||+++................++..|+|||.+.+..++.++|||||||+
T Consensus 160 ~LH~~~ivH~dikp~NIli~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 237 (326)
T 2w1i_A 160 YLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 237 (326)
T ss_dssp HHHHTTEECSCCCGGGEEEEETTE--EEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred HHHhCCEeccCCCcceEEEcCCCc--EEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHH
Confidence 999999999999999999987764 999999999987654333233344557889999999998889999999999999
Q ss_pred HHHHHhCCCCCCCCChHHH-----------------HHHHH-ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFERD-----------------ANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~~~-----------------~~~i~-~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||+|| ..|+....... ...+. ....+.+..+++++.++|++||+.||++|
T Consensus 238 l~el~tg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 307 (326)
T 2w1i_A 238 LYELFTY-IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 307 (326)
T ss_dssp HHHHHHT-TCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHhc-CCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhC
Confidence 9999998 55665332111 11112 22344567789999999999999999998
No 209
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=9.4e-36 Score=314.38 Aligned_cols=233 Identities=30% Similarity=0.393 Sum_probs=182.6
Q ss_pred EEecccCceEEEEEEe-eCCcEEEEEEeecCCc--hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEccccCChhh
Q 004442 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLND 555 (753)
Q Consensus 479 ~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~c~~~L~~ 555 (753)
..||+|+||.||+|.. .+++.||||.+..... ...+.++..+++.++||||+++++++.+.+..++|||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e-------- 99 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME-------- 99 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE--------
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE--------
Confidence 4799999999999975 4588999999975432 2334444458899999999999999999999999999
Q ss_pred HHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccccCCCCC
Q 004442 556 LIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQ 635 (753)
Q Consensus 556 liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrDLKp~ 635 (753)
|+++|+|.+++.... ....+++..+..++.|++.||+|||+.+|+||||||+
T Consensus 100 --~~~~~~L~~~l~~~~--------------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~ 151 (295)
T 2clq_A 100 --QVPGGSLSALLRSKW--------------------------GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGD 151 (295)
T ss_dssp --CCSEEEHHHHHHHTT--------------------------CCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred --eCCCCCHHHHHHhhc--------------------------cCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChh
Confidence 666778887775431 1234567788999999999999999999999999999
Q ss_pred cEEEec-CCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCC
Q 004442 636 NVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGR--QTRAIDLFSLGCILFFCITGGKHPY 712 (753)
Q Consensus 636 NILL~~-d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~t~ksDIwSfGvvL~EllTG~~~Pf 712 (753)
||+++. ++ .+||+|||+++...... .......||+.|+|||++.+.. ++.++||||||+++|||++| ..||
T Consensus 152 Nil~~~~~~--~~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf 225 (295)
T 2clq_A 152 NVLINTYSG--VLKISDFGTSKRLAGIN---PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG-KPPF 225 (295)
T ss_dssp GEEEETTTC--CEEECCTTTCEESCC--------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHT-SCTT
T ss_pred hEEEECCCC--CEEEeecccccccCCCC---CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHC-CCCc
Confidence 999976 44 49999999998765421 1223456899999999997654 89999999999999999998 6677
Q ss_pred CCChHHH--H-H-HHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 713 GESFERD--A-N-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 713 ~~~~~~~--~-~-~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
....... . . .........+..+++++.++|.+||+.||++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 270 (295)
T 2clq_A 226 YELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270 (295)
T ss_dssp GGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTS
T ss_pred cCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhC
Confidence 5432211 1 1 12233445667889999999999999999998
No 210
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.5e-35 Score=315.92 Aligned_cols=239 Identities=27% Similarity=0.395 Sum_probs=184.7
Q ss_pred eecceEEEeEEecccCceEEEEEEe--eCCcEEEEEEeecCC-----chHHHHHHHH--HHHhCCCCceeeeccccc---
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGN--YEGRSVAVKRLVKTH-----HDVALKEIQN--LIASDQHPNIVRWYGVES--- 537 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~--~~g~~VAVK~l~~~~-----~~~~~~Ei~~--ll~~l~HpNIV~L~g~~~--- 537 (753)
...++|.+.+.||+|+||.||++.. .+|+.||||++.... .....+|+.. .+..++||||++++++|.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4457899999999999999999987 468999999986422 2244555542 234559999999999987
Q ss_pred --CCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHH
Q 004442 538 --DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (753)
Q Consensus 538 --~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qI 615 (753)
.....++|||+|. |+|.+++... ....+++..++.++.||
T Consensus 88 ~~~~~~~~lv~e~~~-----------~~L~~~l~~~---------------------------~~~~~~~~~~~~~~~qi 129 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-----------QDLTTYLDKV---------------------------PEPGVPTETIKDMMFQL 129 (326)
T ss_dssp CSSEEEEEEEEECCS-----------CBHHHHHHHS---------------------------CTTCSCHHHHHHHHHHH
T ss_pred cCCCceEEEEEecCC-----------CCHHHHHHhc---------------------------ccCCCCHHHHHHHHHHH
Confidence 5678899999554 4555555322 12347888999999999
Q ss_pred HHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHH
Q 004442 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLF 695 (753)
Q Consensus 616 a~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIw 695 (753)
+.||.|||+.||+||||||+||+++.++. +||+|||+++..... .......||..|+|||++.+..++.++|||
T Consensus 130 ~~~l~~lH~~gi~H~dlkp~Nili~~~~~--~kl~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 203 (326)
T 1blx_A 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLW 203 (326)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECSCCSCCCCCGG----GGGCCCCCCCTTCCHHHHTTCCCCTHHHHH
T ss_pred HHHHHHHHHCCceeccCCHHHeEEcCCCC--EEEecCcccccccCC----CCccccccccceeCHHHHhcCCCCcchhHH
Confidence 99999999999999999999999977765 999999999865422 122345689999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCChHHH-HHHHHcc---------------------------CcccccCCCHHHHHHHHHccc
Q 004442 696 SLGCILFFCITGGKHPYGESFERD-ANIVKDR---------------------------KDLFLVEHIPEAVDLFTRLLD 747 (753)
Q Consensus 696 SfGvvL~EllTG~~~Pf~~~~~~~-~~~i~~~---------------------------~~~~~~~~s~el~dLI~~cL~ 747 (753)
||||++|||++| .+||....... ...+... .......+++++.+||.+||+
T Consensus 204 slG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 282 (326)
T 1blx_A 204 SVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT 282 (326)
T ss_dssp HHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcC-CCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcC
Confidence 999999999998 66776654322 2222110 001234578899999999999
Q ss_pred cCcCCC
Q 004442 748 PNPDLR 753 (753)
Q Consensus 748 ~DP~~R 753 (753)
.||++|
T Consensus 283 ~dP~~R 288 (326)
T 1blx_A 283 FNPAKR 288 (326)
T ss_dssp SSTTTS
T ss_pred CCcccC
Confidence 999998
No 211
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=316.49 Aligned_cols=241 Identities=26% Similarity=0.384 Sum_probs=182.6
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC--chHHHHHHHHHHHhC-CCCceeeecccccC------
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH--HDVALKEIQNLIASD-QHPNIVRWYGVESD------ 538 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~------ 538 (753)
....++|.+.+.||+|+||.||+|... +|+.||||++.... .....+|+. ++..+ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~-~l~~l~~h~~i~~~~~~~~~~~~~~~ 98 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEIN-MLKKYSHHRNIATYYGAFIKKNPPGM 98 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHH-HHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHH-HHHhccCCCCeeeeeeEEeeccCccc
Confidence 445678999999999999999999764 68999999986532 345556666 45555 89999999999876
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++||| |+.+|+|.+++.... ...+++..++.++.||+.|
T Consensus 99 ~~~~~lv~e----------~~~~~~L~~~l~~~~---------------------------~~~~~~~~~~~i~~qi~~~ 141 (326)
T 2x7f_A 99 DDQLWLVME----------FCGAGSVTDLIKNTK---------------------------GNTLKEEWIAYICREILRG 141 (326)
T ss_dssp CCEEEEEEE----------CCTTEEHHHHHHHSG---------------------------GGCCCHHHHHHHHHHHHHH
T ss_pred cceEEEEEE----------cCCCCcHHHHHHhcc---------------------------cCCCCHHHHHHHHHHHHHH
Confidence 568999999 666777777775421 2457888899999999999
Q ss_pred HHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc-----CCCCCchhh
Q 004442 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL-----QGRQTRAID 693 (753)
Q Consensus 619 L~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksD 693 (753)
|.|||+.+|+||||||+||+++.++. +||+|||++....... .......||+.|+|||++. +..++.++|
T Consensus 142 l~~lH~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 216 (326)
T 2x7f_A 142 LSHLHQHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDRTV---GRRNTFIGTPYWMAPEVIACDENPDATYDFKSD 216 (326)
T ss_dssp HHHHHHTTCCCCCCSGGGEEECTTCC--EEECCCTTTC----------------CCGGGCCHHHHC--------CCTTHH
T ss_pred HHHHHHCCccccCCcHHHEEEcCCCC--EEEeeCcCceecCcCc---cccccccCCccccChhhhccccccCcCCCccch
Confidence 99999999999999999999977765 9999999998764321 1223446899999999987 566899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHccC--cccccCCCHHHHHHHHHccccCcCCC
Q 004442 694 LFSLGCILFFCITGGKHPYGESFE-RDANIVKDRK--DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 694 IwSfGvvL~EllTG~~~Pf~~~~~-~~~~~i~~~~--~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||||||++|||++| .+||..... .....+.... ......+++++.+||.+||..||++|
T Consensus 217 i~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 278 (326)
T 2x7f_A 217 LWSLGITAIEMAEG-APPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQR 278 (326)
T ss_dssp HHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHHHHHHHHhC-CCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhC
Confidence 99999999999998 667765433 2222222222 22345678999999999999999998
No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.5e-35 Score=313.70 Aligned_cols=236 Identities=25% Similarity=0.388 Sum_probs=182.0
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
++|++.+.||+|+||.||++... +|+.||||++.... .....+|+. +++.++||||+++++++.+++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS-LLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHH-HHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHH-HHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 46888999999999999999765 68999999986432 234455555 778999999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
|+|.+ +|.+++... ....+++..+++++.|++.||+|||+.+
T Consensus 82 e~~~~-----------~L~~~~~~~---------------------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (299)
T 2r3i_A 82 EFLHQ-----------DLKKFMDAS---------------------------ALTGIPLPLIKSYLFQLLQGLAFCHSHR 123 (299)
T ss_dssp ECCSE-----------EHHHHHHHT---------------------------TTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EcccC-----------CHHHHHHhh---------------------------hccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 96654 444444322 1235778889999999999999999999
Q ss_pred ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCC-CCchhhHHHHHHHHHHHH
Q 004442 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~t~ksDIwSfGvvL~Ell 705 (753)
|+||||||+||+++.++. +||+|||++........ ......||+.|+|||++.+.. ++.++|||||||++|||+
T Consensus 124 i~H~dlkp~Nili~~~~~--~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 198 (299)
T 2r3i_A 124 VLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVR---TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMV 198 (299)
T ss_dssp CCCCCCCGGGEEECTTSC--EEECSTTHHHHHCCCSB---CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHeEEcCCCC--EEECcchhhhhccCCcc---ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHH
Confidence 999999999999977765 99999999987653321 223345899999999998766 799999999999999999
Q ss_pred hCCCCCCCCChHH-HHHHHHcc-C-----------------cc-----------cccCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFER-DANIVKDR-K-----------------DL-----------FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~~-~~~~i~~~-~-----------------~~-----------~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|| ..||...... ....+... . .. ....+++++++||++||+.||++|
T Consensus 199 ~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 275 (299)
T 2r3i_A 199 TR-RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 275 (299)
T ss_dssp HS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTS
T ss_pred hC-CCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccC
Confidence 98 6677665332 22211110 0 00 113467899999999999999998
No 213
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.6e-36 Score=319.02 Aligned_cols=243 Identities=24% Similarity=0.353 Sum_probs=184.8
Q ss_pred cceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc---hHHHHHHHHHHHhCCCCceeeeccccc----CCceEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVES----DQDFVY 543 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~L~g~~~----~~~~~~ 543 (753)
.++|.+.+.||+|+||.||++.. .+|+.||||++..... +...+|+ .+++.++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREA-DMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHH-HHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHH-HHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 46799999999999999999976 5699999999865432 2333444 4789999999999999987 355789
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++..... ....+++.++++++.|++.||+|||
T Consensus 107 lv~e----------~~~~~~L~~~l~~~~~-------------------------~~~~~~~~~~~~i~~qi~~~L~~LH 151 (317)
T 2buj_A 107 LLLP----------FFKRGTLWNEIERLKD-------------------------KGNFLTEDQILWLLLGICRGLEAIH 151 (317)
T ss_dssp EEEE----------CCTTCBHHHHHHHHHT-------------------------TTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------eCCCCcHHHHHHHHHh-------------------------cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 7777888888764321 2356889999999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc------ccCccCCCCccccccccccCCC---CCchhhH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL------TQNATGYGSSGWQAPEQLLQGR---QTRAIDL 694 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~------~~~~~~~GT~~Y~APE~l~~~~---~t~ksDI 694 (753)
+.+|+||||||+||+++.++. +||+|||++.......... .......||+.|+|||++.+.. ++.++||
T Consensus 152 ~~~ivH~dlkp~NIl~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di 229 (317)
T 2buj_A 152 AKGYAHRDLKPTNILLGDEGQ--PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDV 229 (317)
T ss_dssp HTTEECCCCCGGGEEECTTSC--EEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHH
T ss_pred hCCcccCCCCHHHEEEcCCCC--EEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhH
Confidence 999999999999999977765 9999999988653211100 0011234799999999987654 6899999
Q ss_pred HHHHHHHHHHHhCCCCCCCCChH---HHHHHHH-ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 695 FSLGCILFFCITGGKHPYGESFE---RDANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 695 wSfGvvL~EllTG~~~Pf~~~~~---~~~~~i~-~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||||++|||++| ..||..... ....... ....+....+++++.++|.+||+.||++|
T Consensus 230 ~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 291 (317)
T 2buj_A 230 WSLGCVLYAMMFG-EGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQR 291 (317)
T ss_dssp HHHHHHHHHHHHS-SCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHHHhC-CCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhC
Confidence 9999999999998 678753211 1111122 22233445788999999999999999998
No 214
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7.4e-36 Score=314.54 Aligned_cols=240 Identities=22% Similarity=0.288 Sum_probs=180.6
Q ss_pred cceEEEeEEecccCceEEEEEEee--CCc--EEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCce
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY--EGR--SVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~--~g~--~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~ 541 (753)
.++|++.+.||+|+||+||++... +++ .||||+++... .+...+|+. +++.++||||+++++++.+.+
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN-AMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHH-HHHhCCCCCcccEEEEEccCC-
Confidence 467899999999999999998753 233 69999986432 123344444 778899999999999988765
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+.+|+|.+++.... ..+++..+++++.|++.||.|
T Consensus 95 ~~~v~e----------~~~~~~L~~~l~~~~----------------------------~~~~~~~~~~~~~~i~~~l~~ 136 (291)
T 1u46_A 95 MKMVTE----------LAPLGSLLDRLRKHQ----------------------------GHFLLGTLSRYAVQVAEGMGY 136 (291)
T ss_dssp CEEEEE----------CCTTCBHHHHHHHHG----------------------------GGSCHHHHHHHHHHHHHHHHH
T ss_pred ceeeEe----------cccCCCHHHHHHhcc----------------------------CCcCHHHHHHHHHHHHHHHHH
Confidence 889999 677788888775431 246788899999999999999
Q ss_pred hhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL 701 (753)
||+.+|+||||||+||+++.++. +||+|||+++................+|..|+|||++.+..++.++||||||+++
T Consensus 137 lH~~~i~H~dikp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (291)
T 1u46_A 137 LESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214 (291)
T ss_dssp HHHTTEECSCCCGGGEEEEETTE--EEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred HHhCCcccCCCchheEEEcCCCC--EEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHH
Confidence 99999999999999999987764 9999999998876543333333445678899999999988899999999999999
Q ss_pred HHHHhCCCCCCCCChHH-HHHHHHcc--CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGESFER-DANIVKDR--KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~~~-~~~~i~~~--~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++++.+||...... ....+... ....+..+++++.++|.+||+.||++|
T Consensus 215 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 269 (291)
T 1u46_A 215 WEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 269 (291)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccC
Confidence 99999337788665433 33333322 234556788999999999999999998
No 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.7e-36 Score=319.43 Aligned_cols=248 Identities=25% Similarity=0.324 Sum_probs=177.1
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC----chHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
..++|.+.+.||+|+||.||++... +++.||||++.... .....+|+. +++.++||||+++++++.+.+..++|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQ-AMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHH-HHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3467889999999999999999754 68999999986432 123344444 66788999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.+++........ .....+++..++.++.||+.||.|||+.
T Consensus 92 ~e----------~~~~~~L~~~l~~~~~~~~---------------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 140 (303)
T 2vwi_A 92 MK----------LLSGGSVLDIIKHIVAKGE---------------------HKSGVLDESTIATILREVLEGLEYLHKN 140 (303)
T ss_dssp EE----------CCTTCBHHHHHHHHHHTTT---------------------TTTCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eh----------hccCCchHHHHHHHhhccc---------------------cccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99 6667788777754321100 1234588999999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCc--ccccCccCCCCccccccccccC-CCCCchhhHHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS--CLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILF 702 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~--~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIwSfGvvL~ 702 (753)
+|+||||||+||+++.++. +||+|||++........ .........||+.|+|||++.+ ..++.++|||||||++|
T Consensus 141 ~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 218 (303)
T 2vwi_A 141 GQIHRDVKAGNILLGEDGS--VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218 (303)
T ss_dssp TCCCCCCSGGGEEECTTCC--EEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHH
T ss_pred CCCCCCCChhhEEEcCCCC--EEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHH
Confidence 9999999999999977765 99999999986643211 1112234568999999999876 56899999999999999
Q ss_pred HHHhCCCCCCCCChHHH-HHHHHccCc----------ccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFERD-ANIVKDRKD----------LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~~~-~~~i~~~~~----------~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++| ..||....... ......... .....+++++.++|.+||+.||++|
T Consensus 219 ~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 279 (303)
T 2vwi_A 219 ELATG-AAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 279 (303)
T ss_dssp HHHHS-SCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHhC-CCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhC
Confidence 99998 66776643322 222222111 1234678899999999999999998
No 216
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.2e-35 Score=324.35 Aligned_cols=233 Identities=23% Similarity=0.395 Sum_probs=178.9
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
..+.++|.+.+.||+|+||.||+|... +|+.||||++..... ....+|+ .+++.++||||+++++++...+..
T Consensus 38 ~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~ 116 (371)
T 4exu_A 38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYREL-LLLKHMQHENVIGLLDVFTPASSL 116 (371)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHH-HHHHHCCCTTBCCCSEEECSCSSS
T ss_pred ecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHH-HHHHhcCCCCchhhhhheeccCCc
Confidence 346678999999999999999999754 589999999975432 2334444 478999999999999999877654
Q ss_pred ------EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHH
Q 004442 543 ------YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (753)
Q Consensus 543 ------~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa 616 (753)
++|||+|.++| .+++ ...+++..+..++.||+
T Consensus 117 ~~~~~~~lv~e~~~~~l-----------~~~~-------------------------------~~~~~~~~~~~i~~qi~ 154 (371)
T 4exu_A 117 RNFYDFYLVMPFMQTDL-----------QKIM-------------------------------GMEFSEEKIQYLVYQML 154 (371)
T ss_dssp TTCCCCEEEEECCCEEH-----------HHHT-------------------------------TSCCCHHHHHHHHHHHH
T ss_pred ccceeEEEEEccccccH-----------HHHh-------------------------------hcCCCHHHHHHHHHHHH
Confidence 99999665443 3322 13477888999999999
Q ss_pred HHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHH
Q 004442 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLF 695 (753)
Q Consensus 617 ~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIw 695 (753)
.||+|||+.+|+||||||+|||++.++. +||+|||+++..... .....||+.|+|||++.+ ..++.++|||
T Consensus 155 ~aL~~LH~~~ivH~Dikp~NIll~~~~~--~kL~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 226 (371)
T 4exu_A 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCE--LKILDFGLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIW 226 (371)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECSTTCC--------------CTTCCCTTSCHHHHSCCSCCCTTHHHH
T ss_pred HHHHHHHHCCCcCCCcCHHHeEECCCCC--EEEEecCcccccccC------cCCcccCccccCHHHhcCCCCCCcHHhHH
Confidence 9999999999999999999999977755 999999999865432 234568999999999987 6789999999
Q ss_pred HHHHHHHHHHhCCCCCCCCChHH-HHHHHHc-cC------------------------------cccccCCCHHHHHHHH
Q 004442 696 SLGCILFFCITGGKHPYGESFER-DANIVKD-RK------------------------------DLFLVEHIPEAVDLFT 743 (753)
Q Consensus 696 SfGvvL~EllTG~~~Pf~~~~~~-~~~~i~~-~~------------------------------~~~~~~~s~el~dLI~ 743 (753)
||||++|||++| .+||.+.... ....+.. .. ...+..+++++.+||+
T Consensus 227 slG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (371)
T 4exu_A 227 SVGCIMAEMLTG-KTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLE 305 (371)
T ss_dssp HHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHH
Confidence 999999999998 6677665322 2111110 00 0112456899999999
Q ss_pred HccccCcCCC
Q 004442 744 RLLDPNPDLR 753 (753)
Q Consensus 744 ~cL~~DP~~R 753 (753)
+||+.||++|
T Consensus 306 ~~L~~dP~~R 315 (371)
T 4exu_A 306 KMLELDVDKR 315 (371)
T ss_dssp HHSCSCTTTS
T ss_pred HHCCCChhhc
Confidence 9999999998
No 217
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.5e-35 Score=314.11 Aligned_cols=239 Identities=25% Similarity=0.336 Sum_probs=185.4
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC---chHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
...+.|.+.+.||+|+||.||++... +++.||+|++.... .+...+|+. +++.++||||+++++++.+.+..++|
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE-ILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHH-HHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHH-HHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 34577999999999999999999775 48999999986432 234455555 77889999999999999999999999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.+++... ...+++..++.++.|++.||.|||+.
T Consensus 95 ~e----------~~~~~~l~~~~~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~ 136 (302)
T 2j7t_A 95 IE----------FCPGGAVDAIMLEL----------------------------DRGLTEPQIQVVCRQMLEALNFLHSK 136 (302)
T ss_dssp EE----------CCTTEEHHHHHHHH----------------------------TSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE----------eCCCCcHHHHHHhh----------------------------ccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 99 66667777766432 24578889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccc-----cCCCCCchhhHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQL-----LQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l-----~~~~~t~ksDIwSfGvv 700 (753)
+|+||||||+||+++.++. +||+|||++...... ........||+.|+|||++ .+..++.++||||||++
T Consensus 137 ~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 211 (302)
T 2j7t_A 137 RIIHRDLKAGNVLMTLEGD--IRLADFGVSAKNLKT---LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT 211 (302)
T ss_dssp TCCCCCCSGGGEEECTTSC--EEECCCHHHHHHHHH---HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHH
T ss_pred CcccCCCCHHHEEECCCCC--EEEEECCCCcccccc---ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHH
Confidence 9999999999999977765 999999997643211 1112334689999999998 36778999999999999
Q ss_pred HHHHHhCCCCCCCCChHH-HHHHHHccCc---ccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFER-DANIVKDRKD---LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~~-~~~~i~~~~~---~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++| .+||...... ....+..... ..+..+++++.++|.+||+.||++|
T Consensus 212 l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 267 (302)
T 2j7t_A 212 LIEMAQI-EPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETR 267 (302)
T ss_dssp HHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred HHHHhcC-CCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhC
Confidence 9999998 6677665332 2222222221 2356788999999999999999998
No 218
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.2e-35 Score=311.55 Aligned_cols=239 Identities=24% Similarity=0.383 Sum_probs=190.1
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
..+.++|.+.+.||+|+||.||++... +++.||||++.... .....+|+. +++.++||||+++++++.+.+..
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE-LLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHH-HHHhccCCCccEEEEEEeCCCeE
Confidence 455678999999999999999999775 68999999986432 234445554 78999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+.+|+|.+++.. ...+++.++++++.||+.||.||
T Consensus 97 ~lv~e----------~~~~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~L 137 (287)
T 2wei_A 97 YIVGE----------LYTGGELFDEIIK-----------------------------RKRFSEHDAARIIKQVFSGITYM 137 (287)
T ss_dssp EEEEC----------CCCSCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE----------ccCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 6666777776642 23578889999999999999999
Q ss_pred hhCCccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL 701 (753)
|+.+|+||||||+||+++.++ ...+||+|||++....... ......||+.|+|||.+.+ .++.++||||||+++
T Consensus 138 H~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l 212 (287)
T 2wei_A 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVIL 212 (287)
T ss_dssp HHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS----SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHH
T ss_pred HHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC----ccccccCcccccChHHhcC-CCCCchhhHhHHHHH
Confidence 999999999999999997643 3469999999998764332 1123347899999998865 489999999999999
Q ss_pred HHHHhCCCCCCCCChH-HHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGESFE-RDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~~-~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+|++| .+||..... .....+...... ....+++++.++|.+||+.||++|
T Consensus 213 ~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 268 (287)
T 2wei_A 213 YILLSG-TPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268 (287)
T ss_dssp HHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhC
Confidence 999998 567665433 333444443322 225678999999999999999998
No 219
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.2e-35 Score=314.30 Aligned_cols=239 Identities=23% Similarity=0.314 Sum_probs=175.1
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCceEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~ 543 (753)
+...++|.+.+.||+|+||+||++... ..||||+++.... +.+.+|+ .+++.++|+||+++++++. .+..+
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~-~~~~~ 95 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEV-GVLRKTRHVNILLFMGYST-APQLA 95 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHH-HHHHhCCCCcEEEEEeecc-CCccE
Confidence 445677899999999999999998654 4699999965432 2233444 4789999999999999764 55689
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.++++.. ...+++..+++++.|++.||+|||
T Consensus 96 lv~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~~L~~lH 137 (289)
T 3og7_A 96 IVTQ----------WCEGSSLYHHLHAS----------------------------ETKFEMKKLIDIARQTARGMDYLH 137 (289)
T ss_dssp EEEE----------CCCEEEHHHHHTTC-------------------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE----------ecCCCcHHHHHhhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 66677888777432 235788899999999999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc---CCCCCchhhHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL---QGRQTRAIDLFSLGCI 700 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDIwSfGvv 700 (753)
+.+|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++. +..++.++||||||++
T Consensus 138 ~~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i 214 (289)
T 3og7_A 138 AKSIIHRDLKSNNIFLHEDN--TVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV 214 (289)
T ss_dssp HTTCCCSCCCGGGEEEETTT--EEEECCCC-------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHH
T ss_pred hCCcccccCccceEEECCCC--CEEEccceeccccccccc-cccccccCCCccccCchhhcccCCCCCCcccchHHHHHH
Confidence 99999999999999998776 499999999986543211 12223456899999999986 6678999999999999
Q ss_pred HHHHHhCCCCCCCCChH--HHHHHHHccCc-----ccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFE--RDANIVKDRKD-----LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~--~~~~~i~~~~~-----~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++| ..||..... .....+..... .....+++++.+||.+||+.||++|
T Consensus 215 l~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 273 (289)
T 3og7_A 215 LYELMTG-QLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDER 273 (289)
T ss_dssp HHHHHHS-SCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHC-CCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhC
Confidence 9999998 678865422 22233332221 1234678999999999999999998
No 220
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=7.1e-36 Score=323.91 Aligned_cols=239 Identities=22% Similarity=0.332 Sum_probs=169.4
Q ss_pred eecceEEEe-EEecccCceEEEEEEee-CCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccC----CceEE
Q 004442 470 RIGKLVVFN-KEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVY 543 (753)
Q Consensus 470 ~i~~~~~i~-~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~----~~~~~ 543 (753)
.+.++|.+. +.||+|+||+||++... +|+.||||++... ....+|+...+..++|+||+++++++.. ....+
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 345677775 56999999999999765 6999999999764 4556677767888999999999999865 55689
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
+||| |+.+|+|.+++.... ...+++.++++++.|++.||.|||
T Consensus 103 lv~e----------~~~gg~L~~~l~~~~---------------------------~~~l~~~~~~~i~~ql~~~l~~LH 145 (336)
T 3fhr_A 103 IIME----------CMEGGELFSRIQERG---------------------------DQAFTEREAAEIMRDIGTAIQFLH 145 (336)
T ss_dssp EEEE----------CCTTEEHHHHHHTC----------------------------CCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------ccCCCCHHHHHHhcC---------------------------CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 667788888775421 235788999999999999999999
Q ss_pred hCCccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
+.+|+||||||+|||++.++ ...+||+|||+++..... ......||+.|+|||++.+..++.++|||||||++|
T Consensus 146 ~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ 220 (336)
T 3fhr_A 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 220 (336)
T ss_dssp HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---------------------------CHHHHHHHHHHHHHHHH
T ss_pred hCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc-----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHH
Confidence 99999999999999997643 356999999999876432 123446899999999998888999999999999999
Q ss_pred HHHhCCCCCCCCChHHHH-----HHHHccC----cccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFERDA-----NIVKDRK----DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~~~~-----~~i~~~~----~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||++| .+||........ ..+.... ......+++++.+||.+||+.||++|
T Consensus 221 ~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 279 (336)
T 3fhr_A 221 ILLCG-FPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 279 (336)
T ss_dssp HHHHS-SCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHC-CCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHC
Confidence 99998 667755432221 1111111 12235678999999999999999998
No 221
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-35 Score=319.57 Aligned_cols=239 Identities=29% Similarity=0.420 Sum_probs=186.0
Q ss_pred ceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----------hHHHHHHHHHHHhCCCCceeeecccc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQHPNIVRWYGVE 536 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~HpNIV~L~g~~ 536 (753)
..+.++|.+.+.||+|+||.||++... +++.||||.+..... ....+|+. +++.++||||+++++++
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~ 84 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE-ILKKLNHPCIIKIKNFF 84 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHH-HHHHCCCTTBCCEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHH-HHHhCCCCCCceEeeEE
Confidence 445678999999999999999999764 589999999864321 12344554 78899999999999998
Q ss_pred cCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHH
Q 004442 537 SDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (753)
Q Consensus 537 ~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa 616 (753)
..++ .++||| |+.+|+|.+++.. ...+++..+..++.||+
T Consensus 85 ~~~~-~~lv~e----------~~~~~~L~~~~~~-----------------------------~~~~~~~~~~~~~~qi~ 124 (322)
T 2ycf_A 85 DAED-YYIVLE----------LMEGGELFDKVVG-----------------------------NKRLKEATCKLYFYQML 124 (322)
T ss_dssp ESSS-EEEEEE----------CCTTEETHHHHST-----------------------------TCCCCHHHHHHHHHHHH
T ss_pred cCCc-eEEEEe----------cCCCCcHHHHHhc-----------------------------cCCCCHHHHHHHHHHHH
Confidence 7655 899999 6667777776632 23578888999999999
Q ss_pred HHHHHhhhCCccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc---CCCCCchh
Q 004442 617 SGLSHLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL---QGRQTRAI 692 (753)
Q Consensus 617 ~gL~yLH~~~IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ks 692 (753)
.||.|||+.+|+||||||+|||++.++ ...+||+|||+++...... ......||+.|+|||++. ...++.++
T Consensus 125 ~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 200 (322)
T 2ycf_A 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAV 200 (322)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH----HHHHHHSCCTTCCHHHHHHTTTTTCTTHH
T ss_pred HHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccc----ccccccCCcCccCchhhccCCCCCCCchh
Confidence 999999999999999999999997654 3469999999998765321 112345899999999974 56689999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 693 DLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 693 DIwSfGvvL~EllTG~~~Pf~~~~~--~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||||||++|||++| .+||..... .....+...... ....+++++.+||++||..||++|
T Consensus 201 Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 266 (322)
T 2ycf_A 201 DCWSLGVILFICLSG-YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266 (322)
T ss_dssp HHHHHHHHHHHHHHS-SCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred hHHHHHHHHHHHHhC-CCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhC
Confidence 999999999999998 668765422 222333333322 235678999999999999999998
No 222
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.5e-35 Score=318.08 Aligned_cols=203 Identities=22% Similarity=0.261 Sum_probs=162.2
Q ss_pred cceecceEEEeEEecccCceEEEEEEe--eCCcEEEEEEeecCCc--hHHHHHHHHHHHhCCC------Cceeeeccccc
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN--YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQH------PNIVRWYGVES 537 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~--~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~H------pNIV~L~g~~~ 537 (753)
+..+.++|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. ++..++| ++|+++++++.
T Consensus 9 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~-~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQ-VLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHH-HHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred CCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHH-HHHHhhhcCCCCceeeEeeecccc
Confidence 456678899999999999999999975 4689999999975432 23344544 5555544 45999999999
Q ss_pred CCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 538 ~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
+.+..++|||+| +|+|.+++.... ...+++..+.+++.||+.
T Consensus 88 ~~~~~~lv~e~~-----------~~~l~~~l~~~~---------------------------~~~~~~~~~~~~~~qi~~ 129 (339)
T 1z57_A 88 HHGHICIVFELL-----------GLSTYDFIKENG---------------------------FLPFRLDHIRKMAYQICK 129 (339)
T ss_dssp ETTEEEEEEECC-----------CCBHHHHHHHTT---------------------------TCCCCHHHHHHHHHHHHH
T ss_pred cCCcEEEEEcCC-----------CCCHHHHHHhcC---------------------------CCCCcHHHHHHHHHHHHH
Confidence 999999999955 455555553221 235778899999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCC-----------------CCeEEEEeccCceeccCCCcccccCccCCCCcccccc
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDK-----------------SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAP 680 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~-----------------~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~AP 680 (753)
||+|||+.+|+||||||+|||++.++ +..+||+|||+++..... .....||+.|+||
T Consensus 130 ~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aP 203 (339)
T 1z57_A 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH------HSTLVSTRHYRAP 203 (339)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC------CCSSCSCGGGCCH
T ss_pred HHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc------cccccCCccccCh
Confidence 99999999999999999999997643 345999999999875432 2345689999999
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Q 004442 681 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF 716 (753)
Q Consensus 681 E~l~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~ 716 (753)
|++.+..++.++|||||||++|||++| .+||....
T Consensus 204 E~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~ 238 (339)
T 1z57_A 204 EVILALGWSQPCDVWSIGCILIEYYLG-FTVFPTHD 238 (339)
T ss_dssp HHHTTSCCCTHHHHHHHHHHHHHHHHS-SCSCCCSC
T ss_pred HHhhCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCC
Confidence 999999999999999999999999999 66776543
No 223
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.1e-35 Score=327.07 Aligned_cols=234 Identities=23% Similarity=0.382 Sum_probs=167.3
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCC---
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ--- 539 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~--- 539 (753)
..+.++|.+.+.||+|+||.||+|.. .+|+.||||++.... .....+|+. +++.++||||+++++++...
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~ 103 (367)
T 2fst_X 25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-LLKHMKHENVIGLLDVFTPARSL 103 (367)
T ss_dssp EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHH-HHHHCCCTTBCCCSEEECSCSSG
T ss_pred cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEecCCcc
Confidence 34567899999999999999999975 468999999996532 123445555 78899999999999998654
Q ss_pred ---ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHH
Q 004442 540 ---DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (753)
Q Consensus 540 ---~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa 616 (753)
...|+|+|++.++|.+++ . ...+++..+..++.||+
T Consensus 104 ~~~~~~~lv~e~~~~~L~~~~-----------~------------------------------~~~l~~~~~~~i~~qi~ 142 (367)
T 2fst_X 104 EEFNDVYLVTHLMGADLNNIV-----------K------------------------------CQKLTDDHVQFLIYQIL 142 (367)
T ss_dssp GGCCCCEEEEECCCEECC----------------------------------------------CCCCHHHHHHHHHHHH
T ss_pred ccCCeEEEEecccCCCHHHHH-----------h------------------------------cCCCCHHHHHHHHHHHH
Confidence 567999996655444333 1 13577888999999999
Q ss_pred HHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHH
Q 004442 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLF 695 (753)
Q Consensus 617 ~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIw 695 (753)
+||+|||+.+|+||||||+|||++.++. +||+|||+++..... ....+||+.|+|||++.+ ..++.++|||
T Consensus 143 ~aL~~LH~~givH~Dlkp~NIll~~~~~--~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 214 (367)
T 2fst_X 143 RGLKYIHSADIIHRDLKPSNLAVNEDCE--LKILDFGLARHTADE------MTGYVATRWYRAPEIMLNWMHYNQTVDIW 214 (367)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECC---------------------CCCTTCCHHHHTTCCSCCTTHHHH
T ss_pred HHHHHHHHCCeeeCCCCHhhEEECCCCC--EEEeecccccccccc------CCCcCcCcCccChHHHcCCcCCCchhhHH
Confidence 9999999999999999999999977654 999999999875432 234568999999999987 6789999999
Q ss_pred HHHHHHHHHHhCCCCCCCCChH-HHHHHHHcc-----------------------Cc--------ccccCCCHHHHHHHH
Q 004442 696 SLGCILFFCITGGKHPYGESFE-RDANIVKDR-----------------------KD--------LFLVEHIPEAVDLFT 743 (753)
Q Consensus 696 SfGvvL~EllTG~~~Pf~~~~~-~~~~~i~~~-----------------------~~--------~~~~~~s~el~dLI~ 743 (753)
||||++|||++| ++||.+... .....+... .. ......++++.+||+
T Consensus 215 slG~il~ell~g-~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~ 293 (367)
T 2fst_X 215 SVGCIMAELLTG-RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLE 293 (367)
T ss_dssp HHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHH
Confidence 999999999998 667765432 222221110 00 012346789999999
Q ss_pred HccccCcCCC
Q 004442 744 RLLDPNPDLR 753 (753)
Q Consensus 744 ~cL~~DP~~R 753 (753)
+||..||++|
T Consensus 294 ~mL~~dP~~R 303 (367)
T 2fst_X 294 KMLVLDSDKR 303 (367)
T ss_dssp HHSCSSGGGS
T ss_pred HhCCCCcccC
Confidence 9999999998
No 224
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.7e-35 Score=318.29 Aligned_cols=240 Identities=26% Similarity=0.345 Sum_probs=166.9
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
.++|.+.+.||+|+||.||++... +|+.||||++..... ....+|+..+++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 466888899999999999999774 689999999976532 244556666778899999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC-
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI- 625 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~- 625 (753)
|+|.++|.+++ ..... .....+++..+.+++.|++.||.|||+.
T Consensus 101 e~~~~~l~~~~-----------~~~~~------------------------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 145 (327)
T 3aln_A 101 ELMSTSFDKFY-----------KYVYS------------------------VLDDVIPEEILGKITLATVKALNHLKENL 145 (327)
T ss_dssp CCCSEEHHHHH-----------HHHHH------------------------TTCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCChHHHH-----------HHHHh------------------------hhcccCcHHHHHHHHHHHHHHHHHHhccC
Confidence 97765554443 21110 1235678889999999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccc----cCCCCCchhhHHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQL----LQGRQTRAIDLFSLGCIL 701 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~t~ksDIwSfGvvL 701 (753)
+|+||||||+||+++.++ .+||+|||+++...... ......||+.|+|||++ .+..++.++|||||||++
T Consensus 146 ~ivH~dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 219 (327)
T 3aln_A 146 KIIHRDIKPSNILLDRSG--NIKLCDFGISGQLVDSI----AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITL 219 (327)
T ss_dssp SCCCSCCCGGGEEEETTT--EEEECCCSSSCC----------------------------------CCSHHHHHHHHHHH
T ss_pred CEeECCCCHHHEEEcCCC--CEEEccCCCceeccccc----ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHH
Confidence 999999999999997775 49999999998765332 12233589999999998 456689999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHH--HHHccCc-c----cccCCCHHHHHHHHHccccCcCCC
Q 004442 702 FFCITGGKHPYGESFERDAN--IVKDRKD-L----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 702 ~EllTG~~~Pf~~~~~~~~~--~i~~~~~-~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++| ..||......... .+..... . ....+++++.+||.+||+.||++|
T Consensus 220 ~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 277 (327)
T 3aln_A 220 YELATG-RFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKR 277 (327)
T ss_dssp HHHHHS-CCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHC-CCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhC
Confidence 999998 6788654322111 1111111 1 123578999999999999999998
No 225
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=316.69 Aligned_cols=240 Identities=23% Similarity=0.335 Sum_probs=166.1
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc---hHHHHHHHHHHHhC-CCCceeeecccc--------cC
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH---DVALKEIQNLIASD-QHPNIVRWYGVE--------SD 538 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l-~HpNIV~L~g~~--------~~ 538 (753)
..+|.+.+.||+|+||.||++... +|+.||||++..... ....+|+. ++..+ +||||+++++++ ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~-~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC-FMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHH-HHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHH-HHHHhccCCChhhccccccccccccccC
Confidence 457999999999999999999764 689999999865542 23455555 55555 599999999988 44
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
....++|||+|.+ +|.+++.... ....+++.++++++.||+.|
T Consensus 106 ~~~~~lv~e~~~g-----------~L~~~l~~~~--------------------------~~~~~~~~~~~~i~~qi~~~ 148 (337)
T 3ll6_A 106 QAEFLLLTELCKG-----------QLVEFLKKME--------------------------SRGPLSCDTVLKIFYQTCRA 148 (337)
T ss_dssp SEEEEEEEECCSE-----------EHHHHHHHHH--------------------------TTCSCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEEecCC-----------CHHHHHHHhh--------------------------ccCCCCHHHHHHHHHHHHHH
Confidence 5668999996654 4444443221 13458889999999999999
Q ss_pred HHHhhhCC--ccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc---------ccCccCCCCccccccccc---c
Q 004442 619 LSHLHEIG--LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL---------TQNATGYGSSGWQAPEQL---L 684 (753)
Q Consensus 619 L~yLH~~~--IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~---------~~~~~~~GT~~Y~APE~l---~ 684 (753)
|+|||+.+ |+||||||+|||++.++. +||+|||+++......... .......||+.|+|||++ .
T Consensus 149 l~~LH~~~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 226 (337)
T 3ll6_A 149 VQHMHRQKPPIIHRDLKVENLLLSNQGT--IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYS 226 (337)
T ss_dssp HHHHHTSSSCCBCCCCCGGGCEECTTSC--EEBCCCTTCBCCSSCC-------------------------------CCT
T ss_pred HHHHHhCCCCEEEccCCcccEEECCCCC--EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccc
Confidence 99999999 999999999999977764 9999999998765432111 111244589999999998 5
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 685 QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 685 ~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+..++.++|||||||++|||+|| .+||........ .............++++.+||.+||+.||++|
T Consensus 227 ~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 293 (337)
T 3ll6_A 227 NFPIGEKQDIWALGCILYLLCFR-QHPFEDGAKLRI-VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEER 293 (337)
T ss_dssp TSCSSHHHHHHHHHHHHHHHHHS-SCCC-------------CCCCTTCCSSGGGHHHHHHHSCSSGGGS
T ss_pred cCCCChHHhHHHHHHHHHHHHhC-CCCCcchhHHHh-hcCcccCCcccccchHHHHHHHHHccCChhhC
Confidence 66789999999999999999998 678765432221 11122233445667889999999999999998
No 226
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.6e-35 Score=318.78 Aligned_cols=250 Identities=24% Similarity=0.339 Sum_probs=187.9
Q ss_pred ceEEEeEEecccCceEEEEEEee-CCcE--EEEEEeecCC----chHHHHHHHHHHHhC-CCCceeeecccccCCceEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRS--VAVKRLVKTH----HDVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~-~g~~--VAVK~l~~~~----~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~L 544 (753)
++|.+.+.||+|+||.||++... +|.. ||||++.... .+...+|+. ++..+ +||||+++++++.+.+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE-VLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHH-HHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHH-HHHhccCCCchhhhceeeeeCCceEE
Confidence 56788899999999999999765 4654 4999986532 233445555 67788 99999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+++|+|.+++........... ..........+++.++++++.||+.||+|||+
T Consensus 104 v~e----------~~~~~~L~~~l~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 160 (327)
T 1fvr_A 104 AIE----------YAPHGNLLDFLRKSRVLETDPA-------------FAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160 (327)
T ss_dssp EEC----------CCTTCBHHHHHHTTCHHHHCHH-------------HHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe----------cCCCCCHHHHHHhccccccccc-------------ccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 6667778777764321000000 00000123468999999999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHH
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~El 704 (753)
.+|+||||||+||+++.++ .+||+|||+++..... .......+++.|+|||++.+..++.++|||||||++|||
T Consensus 161 ~~ivH~dlkp~NIl~~~~~--~~kL~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 234 (327)
T 1fvr_A 161 KQFIHRDLAARNILVGENY--VAKIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 234 (327)
T ss_dssp TTEECSCCSGGGEEECGGG--CEEECCTTCEESSCEE----CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred CCccCCCCccceEEEcCCC--eEEEcccCcCcccccc----ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHH
Confidence 9999999999999997765 4999999999743321 122334578899999999988899999999999999999
Q ss_pred Hh-CCCCCCCCChHH-HHHHHHcc-CcccccCCCHHHHHHHHHccccCcCCC
Q 004442 705 IT-GGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 705 lT-G~~~Pf~~~~~~-~~~~i~~~-~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+| | .+||...... ....+... ....+..+++++.+||.+||..||++|
T Consensus 235 lt~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 285 (327)
T 1fvr_A 235 VSLG-GTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYER 285 (327)
T ss_dssp HTTS-CCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGS
T ss_pred HcCC-CCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 98 6 6788665433 33333332 334566788999999999999999998
No 227
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.2e-36 Score=329.68 Aligned_cols=233 Identities=15% Similarity=0.081 Sum_probs=162.8
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----hHHHHHHH---HHHHhCCCCceeeecccc------
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQ---NLIASDQHPNIVRWYGVE------ 536 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~---~ll~~l~HpNIV~L~g~~------ 536 (753)
...|.+.+.||+|+||.||++... +|+.||||++..... ...++++. .++.. +||||++++..+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 355889999999999999999764 689999999986542 22333432 34555 799988855322
Q ss_pred -cCC-----------------ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhh
Q 004442 537 -SDQ-----------------DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELW 598 (753)
Q Consensus 537 -~~~-----------------~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (753)
... ...++||| |+. |+|.+++.....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e----------~~~-~~L~~~l~~~~~------------------------- 183 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMP----------AAS-VDLELLFSTLDF------------------------- 183 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEEC----------CCS-EEHHHHHHHHHH-------------------------
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEec----------CCC-CCHHHHHHHhcc-------------------------
Confidence 111 44899999 444 566666554321
Q ss_pred hcCCCCHHHH------HHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCC
Q 004442 599 KANGHPSAQL------LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGY 672 (753)
Q Consensus 599 ~~~~l~~~~~------l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~ 672 (753)
.+.+..+ +.++.||+.||+|||+++|+||||||+|||++.++. +||+|||+++...... ....
T Consensus 184 ---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~--~kL~DFG~a~~~~~~~------~~~~ 252 (371)
T 3q60_A 184 ---VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGR--LMLGDVSALWKVGTRG------PASS 252 (371)
T ss_dssp ---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSC--EEECCGGGEEETTCEE------EGGG
T ss_pred ---ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCC--EEEEecceeeecCCCc------cCcc
Confidence 1222333 678899999999999999999999999999977765 9999999998764321 1334
Q ss_pred CCccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH--------ccC--cccccCCCHHHHH
Q 004442 673 GSSGWQAPEQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK--------DRK--DLFLVEHIPEAVD 740 (753)
Q Consensus 673 GT~~Y~APE~l~~--~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~--------~~~--~~~~~~~s~el~d 740 (753)
+|+.|+|||++.+ ..++.++|||||||++|||+|| .+||............ ... .+....+++++.+
T Consensus 253 ~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (371)
T 3q60_A 253 VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL-FLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKT 331 (371)
T ss_dssp SCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS-SCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHH
T ss_pred CCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC-CCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHH
Confidence 6799999999987 6799999999999999999998 6788665322111000 011 1223467899999
Q ss_pred HHHHccccCcCCC
Q 004442 741 LFTRLLDPNPDLR 753 (753)
Q Consensus 741 LI~~cL~~DP~~R 753 (753)
||.+||+.||++|
T Consensus 332 li~~~L~~dP~~R 344 (371)
T 3q60_A 332 LIGRFLNFDRRRR 344 (371)
T ss_dssp HHHHHTCSSTTTC
T ss_pred HHHHHcCCChhhC
Confidence 9999999999998
No 228
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.2e-35 Score=310.95 Aligned_cols=236 Identities=25% Similarity=0.315 Sum_probs=170.3
Q ss_pred cceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCceEEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~ 546 (753)
.++|.+.+.||+|+||.||++... +|+.||||++..... ...+.|+..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356888999999999999999775 689999999976542 234556666788899999999999999999999999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC-
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI- 625 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~- 625 (753)
|+|++.+..+. . .....+++..+++++.|++.||.|||+.
T Consensus 104 e~~~~~~~~l~------------~---------------------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 144 (318)
T 2dyl_A 104 ELMGTCAEKLK------------K---------------------------RMQGPIPERILGKMTVAIVKALYYLKEKH 144 (318)
T ss_dssp CCCSEEHHHHH------------H---------------------------HHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCcHHHHH------------H---------------------------HhccCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 96643222221 1 1124578889999999999999999995
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc-----CCCCCchhhHHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL-----QGRQTRAIDLFSLGCI 700 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDIwSfGvv 700 (753)
+|+||||||+||+++.++. +||+|||++....... ......||+.|+|||++. ...++.++|||||||+
T Consensus 145 ~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 218 (318)
T 2dyl_A 145 GVIHRDVKPSNILLDERGQ--IKLCDFGISGRLVDDK----AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218 (318)
T ss_dssp CCCCCCCCGGGEEECTTSC--EEECCCTTC------------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred CEEeCCCCHHHEEECCCCC--EEEEECCCchhccCCc----cccccCCCccccChhhcccccccccCCccccchhhHHHH
Confidence 9999999999999977754 9999999997664321 122345899999999984 4568999999999999
Q ss_pred HHHHHhCCCCCCCCC--hHHHHHHHHccCcc-cc--cCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGES--FERDANIVKDRKDL-FL--VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~--~~~~~~~i~~~~~~-~~--~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++| ..||... .......+...... .+ ..+++++.+||.+||+.||++|
T Consensus 219 l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 275 (318)
T 2dyl_A 219 LVELATG-QFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKR 275 (318)
T ss_dssp HHHHHHS-SCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTS
T ss_pred HHHHHhC-CCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHC
Confidence 9999998 6788653 22333333333222 22 3578999999999999999998
No 229
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.9e-35 Score=314.55 Aligned_cols=234 Identities=24% Similarity=0.326 Sum_probs=180.6
Q ss_pred eEEecccCceEEEEEEeeCCcEEEEEEeecCC------chHHHHHHHHHHHhCCCCceeeecccccCCceEEEEEccccC
Q 004442 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (753)
Q Consensus 478 ~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV~E~c~~ 551 (753)
.+.||+|+||.||+|.. +++.||||++.... ....+..+..+++.++||||+++++++.+.+..++|||
T Consensus 36 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e---- 110 (307)
T 2nru_A 36 GNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV---- 110 (307)
T ss_dssp CCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE----
T ss_pred CCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE----
Confidence 37799999999999876 68999999986421 12333333447899999999999999999999999999
Q ss_pred ChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCccccC
Q 004442 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (753)
Q Consensus 552 ~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrD 631 (753)
|+++|+|.+++.... ....+++..+++++.|++.||+|||+.+|+|||
T Consensus 111 ------~~~~~~L~~~l~~~~--------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d 158 (307)
T 2nru_A 111 ------YMPNGSLLDRLSCLD--------------------------GTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 158 (307)
T ss_dssp ------CCTTCBHHHHHHTGG--------------------------GCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred ------ecCCCcHHHHHHhcc--------------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCC
Confidence 777888888875432 134588899999999999999999999999999
Q ss_pred CCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 004442 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP 711 (753)
Q Consensus 632 LKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~~P 711 (753)
|||+||+++.++ .+||+|||+++........ .......||+.|+|||++.+ .++.++||||||+++|||++| .+|
T Consensus 159 lkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g-~~p 233 (307)
T 2nru_A 159 IKSANILLDEAF--TAKISDFGLARASEKFAQT-VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPA 233 (307)
T ss_dssp CCGGGEEECTTC--CEEECCCTTCEECCSCSSC-EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHC-CCS
T ss_pred CCHHHEEEcCCC--cEEEeeccccccccccccc-ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHC-CCC
Confidence 999999997665 4999999999876543221 12234568999999998864 589999999999999999998 678
Q ss_pred CCCChHH-----HHHHHHccC-----------cccccCCCHHHHHHHHHccccCcCCC
Q 004442 712 YGESFER-----DANIVKDRK-----------DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 712 f~~~~~~-----~~~~i~~~~-----------~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|...... ......... ...+...++++.++|.+||+.||++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 291 (307)
T 2nru_A 234 VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKR 291 (307)
T ss_dssp BCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTS
T ss_pred cccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccC
Confidence 7654221 111111111 11223345678999999999999998
No 230
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.4e-35 Score=312.44 Aligned_cols=239 Identities=23% Similarity=0.375 Sum_probs=179.6
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCC--CCceeeecccccCCce
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQ--HPNIVRWYGVESDQDF 541 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~--HpNIV~L~g~~~~~~~ 541 (753)
...+++|.+.+.||+|+||.||++...+++.||||++..... +...+|+. ++..++ |+||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA-YLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHH-HHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHH-HHHhccccCCceEEEEEEeecCCE
Confidence 344577999999999999999999888899999999965432 23344554 566666 5999999999999999
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++|||++.+ +|.+++.. ...+++.+++.++.|++.||.|
T Consensus 103 ~~lv~e~~~~-----------~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~aL~~ 142 (313)
T 3cek_A 103 IYMVMECGNI-----------DLNSWLKK-----------------------------KKSIDPWERKSYWKNMLEAVHT 142 (313)
T ss_dssp EEEEECCCSE-----------EHHHHHHH-----------------------------CSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCC-----------cHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 9999995444 44444432 2356778889999999999999
Q ss_pred hhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-----------CCCCc
Q 004442 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-----------GRQTR 690 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~t~ 690 (753)
||+.+|+||||||+|||++. ..+||+|||+++........ .......||+.|+|||++.+ ..++.
T Consensus 143 LH~~~ivH~dlkp~NIl~~~---~~~kL~Dfg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~ 218 (313)
T 3cek_A 143 IHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 218 (313)
T ss_dssp HHHTTCCCCCCCGGGEEEET---TEEEECCCSSSCC---------------CCGGGCCHHHHTTCC----------CCCH
T ss_pred HHHCCceecCCCcccEEEEC---CeEEEeeccccccccCcccc-ccccCCCCCCCcCCHHHHhhcccccccccccccCCc
Confidence 99999999999999999953 35999999999876543211 12234468999999999875 46889
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHc--cCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 691 AIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKD--RKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 691 ksDIwSfGvvL~EllTG~~~Pf~~~~~~~--~~~i~~--~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
++|||||||++|||++| ..||....... ...... ....++...++++.++|.+||+.||++|
T Consensus 219 ~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 284 (313)
T 3cek_A 219 KSDVWSLGCILYYMTYG-KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284 (313)
T ss_dssp HHHHHHHHHHHHHHHHS-SCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTS
T ss_pred hHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccC
Confidence 99999999999999999 66886643222 222222 2234556678899999999999999998
No 231
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=9.9e-36 Score=321.23 Aligned_cols=241 Identities=23% Similarity=0.374 Sum_probs=186.4
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHh--CCCCceeeecccccCCc----eE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIAS--DQHPNIVRWYGVESDQD----FV 542 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~--l~HpNIV~L~g~~~~~~----~~ 542 (753)
+.+.++|.+.+.||+|+||.||++.. +|+.||||++.........+|.. ++.. ++||||+++++++.+.+ ..
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~-~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAE-IYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHH-HHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchhHHHHHHHHH-HHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 45567899999999999999999876 68999999998766566666666 4444 79999999999998775 89
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
++||| |+.+|+|.+++.. ..+++.++++++.|++.||+||
T Consensus 116 ~lv~e----------~~~~g~L~~~l~~------------------------------~~~~~~~~~~i~~~i~~~l~~l 155 (342)
T 1b6c_B 116 WLVSD----------YHEHGSLFDYLNR------------------------------YTVTVEGMIKLALSTASGLAHL 155 (342)
T ss_dssp EEEEC----------CCTTCBHHHHHHH------------------------------CCBCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----------ecCCCcHHHHHhc------------------------------cCccHHHHHHHHHHHHHHHHHH
Confidence 99999 7777888887742 2467888999999999999999
Q ss_pred h--------hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc-ccCccCCCCccccccccccCCC------
Q 004442 623 H--------EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL-TQNATGYGSSGWQAPEQLLQGR------ 687 (753)
Q Consensus 623 H--------~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~------ 687 (753)
| +.+|+||||||+|||++.++. +||+|||+++......... .......||+.|+|||++.+..
T Consensus 156 H~~~~~~~~~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 233 (342)
T 1b6c_B 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 233 (342)
T ss_dssp HCCBCSTTCBCEEECSCCSGGGEEECTTSC--EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHH
T ss_pred HHHHhhhcccCCeeeCCCCHHHEEECCCCC--EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccc
Confidence 9 889999999999999977764 9999999998775443221 1234456999999999997763
Q ss_pred CCchhhHHHHHHHHHHHHhCC---------CCCCCCC------hHHHHHHHHcc--Cccccc-----CCCHHHHHHHHHc
Q 004442 688 QTRAIDLFSLGCILFFCITGG---------KHPYGES------FERDANIVKDR--KDLFLV-----EHIPEAVDLFTRL 745 (753)
Q Consensus 688 ~t~ksDIwSfGvvL~EllTG~---------~~Pf~~~------~~~~~~~i~~~--~~~~~~-----~~s~el~dLI~~c 745 (753)
++.++|||||||++|||+||+ ..||... .......+... ....+. ..++.+.+||.+|
T Consensus 234 ~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 313 (342)
T 1b6c_B 234 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC 313 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHH
T ss_pred cCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHH
Confidence 347899999999999999983 3566443 12222222221 112222 2235788999999
Q ss_pred cccCcCCC
Q 004442 746 LDPNPDLR 753 (753)
Q Consensus 746 L~~DP~~R 753 (753)
|+.||++|
T Consensus 314 l~~dp~~R 321 (342)
T 1b6c_B 314 WYANGAAR 321 (342)
T ss_dssp CCSSGGGS
T ss_pred hccChhhC
Confidence 99999998
No 232
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.5e-35 Score=325.75 Aligned_cols=200 Identities=22% Similarity=0.308 Sum_probs=160.6
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC--chHHHHHHHHHHHhCC--------CCceeeeccccc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--HDVALKEIQNLIASDQ--------HPNIVRWYGVES 537 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~--------HpNIV~L~g~~~ 537 (753)
..+.++|.+.+.||+|+||+||++.. .+++.||||++.... .+...+|+. +++.++ |+||+++++++.
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIR-LLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHH-HHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred hhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHH-HHHHHhhcCCCCCCcceeeeeeccee
Confidence 45667899999999999999999965 458999999997543 234445555 455553 888999999987
Q ss_pred ----CCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHH
Q 004442 538 ----DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (753)
Q Consensus 538 ----~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~ 613 (753)
+....++|||+|.+++.+++ ... ....+++..++.|+.
T Consensus 112 ~~~~~~~~~~lv~e~~~~~l~~~~-----------~~~---------------------------~~~~~~~~~~~~i~~ 153 (397)
T 1wak_A 112 ISGVNGTHICMVFEVLGHHLLKWI-----------IKS---------------------------NYQGLPLPCVKKIIQ 153 (397)
T ss_dssp EEETTEEEEEEEECCCCCBHHHHH-----------HHT---------------------------TTSCCCHHHHHHHHH
T ss_pred ecCCCCceEEEEEeccCccHHHHH-----------Hhc---------------------------ccCCCCHHHHHHHHH
Confidence 66789999996655444433 211 124578889999999
Q ss_pred HHHHHHHHhhhC-CccccCCCCCcEEEecCCC-----------------------------------------------C
Q 004442 614 DIVSGLSHLHEI-GLIHRDLKPQNVLISKDKS-----------------------------------------------F 645 (753)
Q Consensus 614 qIa~gL~yLH~~-~IiHrDLKp~NILL~~d~~-----------------------------------------------~ 645 (753)
||+.||+|||++ +|+||||||+|||++.++. .
T Consensus 154 qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
T 1wak_A 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKL 233 (397)
T ss_dssp HHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGC
T ss_pred HHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccccccccccc
Confidence 999999999998 9999999999999976641 3
Q ss_pred eEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 004442 646 CAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE 714 (753)
Q Consensus 646 ~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~ 714 (753)
.+||+|||+++..... ....+||+.|+|||++.+..++.++|||||||++|||+|| .+||..
T Consensus 234 ~~kl~DfG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-~~pf~~ 295 (397)
T 1wak_A 234 KVKIADLGNACWVHKH------FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG-DYLFEP 295 (397)
T ss_dssp CEEECCGGGCEETTBC------SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHS-SCSCCC
T ss_pred ceEecccccccccccc------CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhC-CCCCCC
Confidence 6999999999876432 2344689999999999999999999999999999999998 667754
No 233
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.8e-35 Score=317.00 Aligned_cols=232 Identities=23% Similarity=0.395 Sum_probs=177.7
Q ss_pred eecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCCCceeeecccccCCce--
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDF-- 541 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~-- 541 (753)
.+.++|.+.+.||+|+||.||+|... +|+.||||++..... ....+|+. +++.++||||+++++++.+.+.
T Consensus 21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 99 (353)
T 3coi_A 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGLLDVFTPASSLR 99 (353)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHH-HHHHCCCTTBCCCSEEECSCSSGG
T ss_pred ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHH-HHHhcCCCCcccHhheEecccccc
Confidence 45678999999999999999999764 599999999965432 22344544 7889999999999999887654
Q ss_pred ----EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 542 ----VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 542 ----~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
.++|||+|.++|.+++ ...+++..+..++.||+.
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~------------------------------------------~~~~~~~~~~~i~~qi~~ 137 (353)
T 3coi_A 100 NFYDFYLVMPFMQTDLQKIM------------------------------------------GLKFSEEKIQYLVYQMLK 137 (353)
T ss_dssp GCCCCEEEEECCSEEGGGTT------------------------------------------TSCCCHHHHHHHHHHHHH
T ss_pred cceeEEEEeccccCCHHHHh------------------------------------------cCCCCHHHHHHHHHHHHH
Confidence 4999996665443222 124778889999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccC-CCCCchhhHHH
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFS 696 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDIwS 696 (753)
||+|||+.+|+||||||+||+++.++. +||+|||+++..... .....||+.|+|||++.+ ..++.++||||
T Consensus 138 al~~LH~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~s 209 (353)
T 3coi_A 138 GLKYIHSAGVVHRDLKPGNLAVNEDCE--LKILDFGLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWS 209 (353)
T ss_dssp HHHHHHHTTCCCSSCCGGGEEECTTCC--EEECSTTCTTC--------------CCSBCCSCHHHHSCCSCCCTTHHHHH
T ss_pred HHHHHHHCCcccCCCCHHHEeECCCCc--EEEeecccccCCCCC------ccccccCcCcCCHHHHhCcCCCCchhhHHH
Confidence 999999999999999999999977754 999999999865432 223468999999999887 67899999999
Q ss_pred HHHHHHHHHhCCCCCCCCChHH-HHHHHHcc-------------------------------CcccccCCCHHHHHHHHH
Q 004442 697 LGCILFFCITGGKHPYGESFER-DANIVKDR-------------------------------KDLFLVEHIPEAVDLFTR 744 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~~~-~~~~i~~~-------------------------------~~~~~~~~s~el~dLI~~ 744 (753)
|||++|||++| .+||.+.... ....+... .......+++++.+||.+
T Consensus 210 lG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 288 (353)
T 3coi_A 210 VGCIMAEMLTG-KTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEK 288 (353)
T ss_dssp HHHHHHHHHHS-SCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHH
Confidence 99999999998 6677654322 11111100 011234568999999999
Q ss_pred ccccCcCCC
Q 004442 745 LLDPNPDLR 753 (753)
Q Consensus 745 cL~~DP~~R 753 (753)
||+.||++|
T Consensus 289 ~L~~dp~~R 297 (353)
T 3coi_A 289 MLELDVDKR 297 (353)
T ss_dssp HSCSCTTTS
T ss_pred HcCCCcccC
Confidence 999999998
No 234
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.5e-35 Score=317.95 Aligned_cols=239 Identities=25% Similarity=0.347 Sum_probs=170.0
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCC--chHHHHHHHHHHHhCCCCceeeecccccCCc-------
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQD------- 540 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~------- 540 (753)
..++|.+.+.||+|+||.||++... +|+.||||++.... .....+++. .++.++||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~ 99 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQ-DLAVLHHPNIVQLQSYFYTLGERDRRDI 99 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHH-HHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHH-HHHhcCCCCcccHHHhhhccccccccce
Confidence 3467899999999999999999764 58999999986532 233444443 567889999999999985433
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++|||||.++|.+.+ .... .....+++..+..++.|++.||.
T Consensus 100 ~~~lv~e~~~~~l~~~~-----------~~~~-------------------------~~~~~~~~~~~~~~~~qi~~al~ 143 (360)
T 3e3p_A 100 YLNVVMEYVPDTLHRCC-----------RNYY-------------------------RRQVAPPPILIKVFLFQLIRSIG 143 (360)
T ss_dssp EEEEEEECCSCBHHHHH-----------HHHH-------------------------TTTCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEeecccccHHHHH-----------HHHh-------------------------hcccCCCHHHHHHHHHHHHHHHH
Confidence 38999997776544332 1110 12346788889999999999999
Q ss_pred Hhh--hCCccccCCCCCcEEEec-CCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCC-CCchhhHHH
Q 004442 621 HLH--EIGLIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGR-QTRAIDLFS 696 (753)
Q Consensus 621 yLH--~~~IiHrDLKp~NILL~~-d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~t~ksDIwS 696 (753)
||| +.+|+||||||+|||++. ++ .+||+|||+++...... ......||+.|+|||++.+.. ++.++||||
T Consensus 144 ~lH~~~~~ivH~Dlkp~NIll~~~~~--~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s 217 (360)
T 3e3p_A 144 CLHLPSVNVCHRDIKPHNVLVNEADG--TLKLCDFGSAKKLSPSE----PNVAYICSRYYRAPELIFGNQHYTTAVDIWS 217 (360)
T ss_dssp HHTSTTTCCBCSCCCGGGEEEETTTT--EEEECCCTTCBCCCTTS----CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHH
T ss_pred HHhCCCCCeecCcCCHHHEEEeCCCC--cEEEeeCCCceecCCCC----CcccccCCcceeCHHHHcCCCCCCcHHHHHH
Confidence 999 999999999999999976 44 59999999998765432 223456899999999987655 899999999
Q ss_pred HHHHHHHHHhCCCCCCCCChHH-HHHHHHcc--------------------------------CcccccCCCHHHHHHHH
Q 004442 697 LGCILFFCITGGKHPYGESFER-DANIVKDR--------------------------------KDLFLVEHIPEAVDLFT 743 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~~~-~~~~i~~~--------------------------------~~~~~~~~s~el~dLI~ 743 (753)
|||++|||+|| .+||...... ....+... ........++++.+||.
T Consensus 218 lG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 296 (360)
T 3e3p_A 218 VGCIFAEMMLG-EPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLS 296 (360)
T ss_dssp HHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHH
Confidence 99999999998 6677665332 22222110 00112225678999999
Q ss_pred HccccCcCCC
Q 004442 744 RLLDPNPDLR 753 (753)
Q Consensus 744 ~cL~~DP~~R 753 (753)
+||+.||++|
T Consensus 297 ~~L~~dP~~R 306 (360)
T 3e3p_A 297 ALLQYLPEER 306 (360)
T ss_dssp HHTCSSGGGS
T ss_pred HHhccCcccc
Confidence 9999999998
No 235
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-37 Score=329.37 Aligned_cols=238 Identities=22% Similarity=0.371 Sum_probs=167.5
Q ss_pred cceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHh--CCCCceeeecccccCCc----eEEEE
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIAS--DQHPNIVRWYGVESDQD----FVYLS 545 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~--l~HpNIV~L~g~~~~~~----~~~LV 545 (753)
+++|.+.+.||+|+||.||++.. +|+.||||++.........+|.. ++.. ++||||+++++++.+.+ ..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~-~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAE-IYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-TTHHHHHHHHH-HHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEecccchhhHHHHHH-HHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 46678889999999999999865 58999999998776666666665 4444 89999999999988766 78999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh--
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH-- 623 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH-- 623 (753)
|| |+.+|+|.+++.. ..+++..+++++.|++.||+|||
T Consensus 80 ~e----------~~~~g~L~~~l~~------------------------------~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (303)
T 3gxj_A 80 SD----------YHEHGSLFDYLNR------------------------------YTVTVEGMIKLALSTASGLAHLHME 119 (303)
T ss_dssp EE----------CCTTCCHHHHHHH------------------------------CCBCC-CHHHHC-CHHHHHC-CCCC
T ss_pred Ee----------ccCCCCHHHHHhc------------------------------cCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99 7778888888743 23555677999999999999999
Q ss_pred ------hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCccc-ccCccCCCCccccccccccCC------CCCc
Q 004442 624 ------EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL-TQNATGYGSSGWQAPEQLLQG------RQTR 690 (753)
Q Consensus 624 ------~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~------~~t~ 690 (753)
+.+|+||||||+|||++.++. +||+|||+++......... .......||+.|+|||++.+. .++.
T Consensus 120 ~~~~~~~~~ivH~Dlkp~Nil~~~~~~--~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 197 (303)
T 3gxj_A 120 IVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK 197 (303)
T ss_dssp BCSTTCBC-CCCSCCCGGGC-CCTTCC--C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHH
T ss_pred HhhhccCCCEeeCcCCHHHeEECCCCC--EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCc
Confidence 899999999999999977764 8999999998765433221 122334699999999999776 3447
Q ss_pred hhhHHHHHHHHHHHHhCC---------CCCCCCC------hHHHHHHHHcc--Cccccc-----CCCHHHHHHHHHcccc
Q 004442 691 AIDLFSLGCILFFCITGG---------KHPYGES------FERDANIVKDR--KDLFLV-----EHIPEAVDLFTRLLDP 748 (753)
Q Consensus 691 ksDIwSfGvvL~EllTG~---------~~Pf~~~------~~~~~~~i~~~--~~~~~~-----~~s~el~dLI~~cL~~ 748 (753)
++|||||||++|||+||. ..||... .......+... ....+. ..++++.+||.+||+.
T Consensus 198 ~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 277 (303)
T 3gxj_A 198 RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA 277 (303)
T ss_dssp HHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCS
T ss_pred chhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhcc
Confidence 899999999999999982 3344332 11222222211 122222 2234799999999999
Q ss_pred CcCCC
Q 004442 749 NPDLR 753 (753)
Q Consensus 749 DP~~R 753 (753)
||++|
T Consensus 278 dP~~R 282 (303)
T 3gxj_A 278 NGAAR 282 (303)
T ss_dssp SGGGS
T ss_pred CcccC
Confidence 99998
No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=8.7e-35 Score=320.69 Aligned_cols=203 Identities=28% Similarity=0.317 Sum_probs=162.1
Q ss_pred cceecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc--hHHHHHHHHHHHhCC-CC-----ceeeecccccC
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH--DVALKEIQNLIASDQ-HP-----NIVRWYGVESD 538 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~-Hp-----NIV~L~g~~~~ 538 (753)
+..+.++|.+.+.||+|+||+||+|... +++.||||++..... ....+|+. ++..++ |+ +|+++++++..
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~-~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVR-LLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHH-HHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHH-HHHHHHhcccccceeEEEeeeeecc
Confidence 4566788999999999999999999765 588999999975432 22333443 444443 44 49999999999
Q ss_pred CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHH
Q 004442 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (753)
Q Consensus 539 ~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~g 618 (753)
.+..++|||+|.+ +|.+++... ....+++..+..++.|++.|
T Consensus 128 ~~~~~lv~e~~~~-----------~L~~~l~~~---------------------------~~~~~~~~~~~~i~~qi~~a 169 (382)
T 2vx3_A 128 RNHLCLVFEMLSY-----------NLYDLLRNT---------------------------NFRGVSLNLTRKFAQQMCTA 169 (382)
T ss_dssp TTEEEEEEECCCC-----------BHHHHHHHT---------------------------TTSCCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCC-----------CHHHHHhhc---------------------------CcCCCCHHHHHHHHHHHHHH
Confidence 9999999996654 455544322 12457888999999999999
Q ss_pred HHHhh--hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHH
Q 004442 619 LSHLH--EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFS 696 (753)
Q Consensus 619 L~yLH--~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwS 696 (753)
|.||| +.+|+||||||+|||++.++...+||+|||+++..... .....||+.|+|||++.+..++.++||||
T Consensus 170 l~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DiwS 243 (382)
T 2vx3_A 170 LLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRFYRSPEVLLGMPYDLAIDMWS 243 (382)
T ss_dssp HHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC------CCSSCSCGGGCCHHHHTTCCCCTHHHHHH
T ss_pred HHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc------cccccCCccccChHHHcCCCCCcHHHHHH
Confidence 99999 46999999999999997655567999999999876432 23456899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCh
Q 004442 697 LGCILFFCITGGKHPYGESF 716 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~ 716 (753)
|||++|||+|| .+||....
T Consensus 244 lG~il~elltg-~~pf~~~~ 262 (382)
T 2vx3_A 244 LGCILVEMHTG-EPLFSGAN 262 (382)
T ss_dssp HHHHHHHHHHS-SCSSCCSS
T ss_pred HHHHHHHHHhC-CCCCCCCC
Confidence 99999999998 67776653
No 237
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=314.31 Aligned_cols=232 Identities=23% Similarity=0.344 Sum_probs=179.5
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc---------hHHHHHHHHHHHhC----CCCceeeecc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---------DVALKEIQNLIASD----QHPNIVRWYG 534 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~---------~~~~~Ei~~ll~~l----~HpNIV~L~g 534 (753)
..+.++|.+.+.||+|+||.||++.. .+++.||||++..... ....+|+. ++..+ +|+||+++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA-LLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHH-HHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHH-HHHhhcccCCCCCeeeEEE
Confidence 45567899999999999999999966 4689999999965421 12234554 44555 8999999999
Q ss_pred cccCCceEEEEEccccCChhhHHH-HhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHH
Q 004442 535 VESDQDFVYLSLERCTCSLNDLIY-VLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (753)
Q Consensus 535 ~~~~~~~~~LV~E~c~~~L~~liy-~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~ 613 (753)
++.+.+..++||| | +.+|+|.+++... ..+++..+++++.
T Consensus 106 ~~~~~~~~~~v~e----------~~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~~~ 146 (312)
T 2iwi_A 106 WFETQEGFMLVLE----------RPLPAQDLFDYITEK-----------------------------GPLGEGPSRCFFG 146 (312)
T ss_dssp EC-----CEEEEE----------CCSSEEEHHHHHHHH-----------------------------CSCCHHHHHHHHH
T ss_pred EEecCCeEEEEEE----------ecCCCCCHHHHHHhc-----------------------------CCCCHHHHHHHHH
Confidence 9999999999999 5 5677787777432 3478889999999
Q ss_pred HHHHHHHHhhhCCccccCCCCCcEEEe-cCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-Cch
Q 004442 614 DIVSGLSHLHEIGLIHRDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRA 691 (753)
Q Consensus 614 qIa~gL~yLH~~~IiHrDLKp~NILL~-~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~k 691 (753)
||+.||+|||+.+|+||||||+||+++ .++ .+||+|||+++...... .....||..|+|||++.+..+ +.+
T Consensus 147 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~ 219 (312)
T 2iwi_A 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRG--CAKLIDFGSGALLHDEP-----YTDFDGTRVYSPPEWISRHQYHALP 219 (312)
T ss_dssp HHHHHHHHHHHHTEECCCCSGGGEEEETTTT--EEEECCCSSCEECCSSC-----BCCCCSCTTTSCHHHHHHSCBCHHH
T ss_pred HHHHHHHHHHHCCeeecCCChhhEEEeCCCC--eEEEEEcchhhhcccCc-----ccccCCcccccCceeeecCCCCCcc
Confidence 999999999999999999999999997 454 59999999998775431 234458999999999987776 469
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 692 IDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 692 sDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||||||++|||++| +.||..... +......++..+++++.++|.+||+.||++|
T Consensus 220 ~Di~slG~il~~l~~g-~~pf~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 275 (312)
T 2iwi_A 220 ATVWSLGILLYDMVCG-DIPFERDQE-----ILEAELHFPAHVSPDCCALIRRCLAPKPSSR 275 (312)
T ss_dssp HHHHHHHHHHHHHHHS-SCSCCSHHH-----HHHTCCCCCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred chHHHHHHHHHHHHHC-CCCCCChHH-----HhhhccCCcccCCHHHHHHHHHHccCChhhC
Confidence 9999999999999998 678865422 2334455677889999999999999999998
No 238
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.3e-35 Score=332.44 Aligned_cols=242 Identities=20% Similarity=0.265 Sum_probs=187.1
Q ss_pred ceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-hHHHHHHHHHHHhCCC-CceeeecccccCCceEEEE
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASDQH-PNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~H-pNIV~L~g~~~~~~~~~LV 545 (753)
..++++|.+.+.||+|+||.||++.. .+++.||||++..... ....+|+. ++..++| ++|..+..++.+.+..+||
T Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~-il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESK-IYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHH-HHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHH-HHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 34667899999999999999999975 5699999999865433 34555665 6677766 5666777777788899999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
||+| +|+|.+++... ...+++.+++.|+.||+.||+|||+.
T Consensus 82 me~~-----------g~sL~~ll~~~----------------------------~~~l~~~~~~~i~~qi~~aL~yLH~~ 122 (483)
T 3sv0_A 82 MDLL-----------GPSLEDLFNFC----------------------------SRKLSLKTVLMLADQMINRVEFVHSK 122 (483)
T ss_dssp EECC-----------CCBHHHHHHHT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EECC-----------CCCHHHHHHhh----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9954 55555555321 24588899999999999999999999
Q ss_pred CccccCCCCCcEEEe---cCCCCeEEEEeccCceeccCCCccc----ccCccCCCCccccccccccCCCCCchhhHHHHH
Q 004442 626 GLIHRDLKPQNVLIS---KDKSFCAKLSDMGISKRLQGDMSCL----TQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLG 698 (753)
Q Consensus 626 ~IiHrDLKp~NILL~---~d~~~~~KLsDFGla~~~~~~~~~~----~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfG 698 (753)
+|+||||||+||||+ .++ .+||+|||+++......... .......||+.|+|||++.+..++.++||||||
T Consensus 123 gIvHrDIKP~NILl~~~~~~~--~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlG 200 (483)
T 3sv0_A 123 SFLHRDIKPDNFLMGLGRRAN--QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLG 200 (483)
T ss_dssp TEECCCCCGGGEEECCGGGTT--CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred CEeecccCcceEEEecCCCCC--eEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHH
Confidence 999999999999994 444 59999999999876533211 122356799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCChH----HHHHHHH-----ccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 699 CILFFCITGGKHPYGESFE----RDANIVK-----DRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 699 vvL~EllTG~~~Pf~~~~~----~~~~~i~-----~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|+||||++| ..||..... .....+. .........+++++.+||.+||+.||++|
T Consensus 201 vil~elltG-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~R 263 (483)
T 3sv0_A 201 YVLMYFLRG-SLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDK 263 (483)
T ss_dssp HHHHHHHHS-SCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCC
T ss_pred HHHHHHHhC-CCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhC
Confidence 999999998 678865321 1111111 11122346788999999999999999998
No 239
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3e-35 Score=316.36 Aligned_cols=234 Identities=21% Similarity=0.260 Sum_probs=187.0
Q ss_pred cceecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC---------chHHHHHHHHHHHhCC--CCceeeeccc
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---------HDVALKEIQNLIASDQ--HPNIVRWYGV 535 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~---------~~~~~~Ei~~ll~~l~--HpNIV~L~g~ 535 (753)
...+.++|.+.+.||+|+||.||++.. .+++.||||++.... .....+|+. +++.++ |+||++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-LLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHH-HHHHHCSSSCSBCCEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHH-HHHhhccCCCCceEEEEE
Confidence 355677899999999999999999965 468999999996532 123345655 556664 6999999999
Q ss_pred ccCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHH
Q 004442 536 ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (753)
Q Consensus 536 ~~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qI 615 (753)
+.+.+..++|||++.. .|+|.+++.. ...+++..++.++.||
T Consensus 117 ~~~~~~~~lv~e~~~~---------~~~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi 158 (320)
T 3a99_A 117 FERPDSFVLILERPEP---------VQDLFDFITE-----------------------------RGALQEELARSFFWQV 158 (320)
T ss_dssp EECSSEEEEEEECCSS---------EEEHHHHHHH-----------------------------HCSCCHHHHHHHHHHH
T ss_pred EecCCcEEEEEEcCCC---------CccHHHHHhc-----------------------------cCCCCHHHHHHHHHHH
Confidence 9999999999995431 2566666542 2357788899999999
Q ss_pred HHHHHHhhhCCccccCCCCCcEEEe-cCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC-Cchhh
Q 004442 616 VSGLSHLHEIGLIHRDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAID 693 (753)
Q Consensus 616 a~gL~yLH~~~IiHrDLKp~NILL~-~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksD 693 (753)
+.||+|||+.+|+||||||+|||++ .++ .+||+|||+++...... .....||+.|+|||++.+..+ +.++|
T Consensus 159 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~~kL~Dfg~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~D 231 (320)
T 3a99_A 159 LEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTV-----YTDFDGTRVYSPPEWIRYHRYHGRSAA 231 (320)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEEETTTT--EEEECCCTTCEECCSSC-----BCCCCSCGGGSCHHHHHHSCBCHHHHH
T ss_pred HHHHHHHHHCCcEeCCCCHHHEEEeCCCC--CEEEeeCcccccccccc-----ccCCCCCccCCChHHhccCCCCCccch
Confidence 9999999999999999999999997 443 59999999998775421 233468999999999987775 78999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 694 LFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 694 IwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||||||++|||+|| ..||..... +.......+..+++++.+||++||+.||++|
T Consensus 232 i~slG~il~el~~g-~~pf~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 285 (320)
T 3a99_A 232 VWSLGILLYDMVCG-DIPFEHDEE-----IIRGQVFFRQRVSSECQHLIRWCLALRPSDR 285 (320)
T ss_dssp HHHHHHHHHHHHHS-SCSCCSHHH-----HHHCCCCCSSCCCHHHHHHHHHHTCSSGGGS
T ss_pred HHhHHHHHHHHHHC-CCCCCChhh-----hhcccccccccCCHHHHHHHHHHccCChhhC
Confidence 99999999999998 678865422 2334455667889999999999999999998
No 240
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.3e-34 Score=341.78 Aligned_cols=241 Identities=22% Similarity=0.314 Sum_probs=189.7
Q ss_pred ceecceEEEeEEecccCceEEEEEEeeC----CcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 469 ~~i~~~~~i~~~IG~G~fG~Vyka~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
....++|.+.+.||+|+||.||+|.... +..||||++..... +.+.+|+ .+++.++||||++++|++.+ +
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~HpnIv~l~~~~~~-~ 463 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA-LTMRQFDHPHIVKLIGVITE-N 463 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEECS-S
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEec-C
Confidence 3345779999999999999999997642 56899999875432 2333444 47899999999999999854 5
Q ss_pred eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 004442 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (753)
Q Consensus 541 ~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~ 620 (753)
..++||| |+.+|+|.+++... ...+++..++.++.|++.||+
T Consensus 464 ~~~lv~E----------~~~~g~L~~~l~~~----------------------------~~~l~~~~~~~i~~qi~~aL~ 505 (656)
T 2j0j_A 464 PVWIIME----------LCTLGELRSFLQVR----------------------------KFSLDLASLILYAYQLSTALA 505 (656)
T ss_dssp SCEEEEE----------CCTTCBHHHHHHHT----------------------------TTTCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEE----------cCCCCcHHHHHHhc----------------------------cCCCCHHHHHHHHHHHHHHHH
Confidence 6899999 77788888887532 234788889999999999999
Q ss_pred HhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 621 yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
|||+.+|+||||||+|||++.++. +||+|||+++....... .......+|+.|+|||++.+..++.++|||||||+
T Consensus 506 ~LH~~givHrDikp~NILl~~~~~--vkL~DFG~a~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i 581 (656)
T 2j0j_A 506 YLESKRFVHRDIAARNVLVSSNDC--VKLGDFGLSRYMEDSTY--YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581 (656)
T ss_dssp HHHHTTCCCSCCSGGGEEEEETTE--EEECCCCCCCSCCC------------CCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHhCCccccccchHhEEEeCCCC--EEEEecCCCeecCCCcc--eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHH
Confidence 999999999999999999987764 99999999987654321 12223457889999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCChHH-HHHHH-HccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFER-DANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~~-~~~~i-~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++++.+||.+.... ....+ .......+..+++++.++|.+||+.||++|
T Consensus 582 l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 636 (656)
T 2j0j_A 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 636 (656)
T ss_dssp HHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHC
Confidence 999998447788765433 33333 334455777889999999999999999998
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-34 Score=313.51 Aligned_cols=203 Identities=22% Similarity=0.286 Sum_probs=159.9
Q ss_pred cceecceEEEeEEecccCceEEEEEEee-CC-cEEEEEEeecCCc--hHHHHHHHHHHHhCCCCc------eeeeccccc
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY-EG-RSVAVKRLVKTHH--DVALKEIQNLIASDQHPN------IVRWYGVES 537 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~~-~g-~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpN------IV~L~g~~~ 537 (753)
+..+.++|.+.+.||+|+||+||++... ++ +.||||++..... +...+|+. +++.++|+| ++.+.+++.
T Consensus 14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEIN-VLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHH-HHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHH-HHHHHhhcCCCCceeEEEeeeeee
Confidence 3556788999999999999999999764 34 7999999975432 23334444 566666555 999999999
Q ss_pred CCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHH
Q 004442 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (753)
Q Consensus 538 ~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~ 617 (753)
..+..++|||+|.+++. +++... ....+++.++++++.||+.
T Consensus 93 ~~~~~~lv~e~~~~~l~-----------~~l~~~---------------------------~~~~~~~~~~~~i~~qi~~ 134 (355)
T 2eu9_A 93 FHGHMCIAFELLGKNTF-----------EFLKEN---------------------------NFQPYPLPHVRHMAYQLCH 134 (355)
T ss_dssp ETTEEEEEEECCCCBHH-----------HHHHHT---------------------------TTCCCCHHHHHHHHHHHHH
T ss_pred eCCeEEEEEeccCCChH-----------HHHHhc---------------------------cCCCCCHHHHHHHHHHHHH
Confidence 99999999996654443 333221 1235788899999999999
Q ss_pred HHHHhhhCCccccCCCCCcEEEecC-----------------CCCeEEEEeccCceeccCCCcccccCccCCCCcccccc
Q 004442 618 GLSHLHEIGLIHRDLKPQNVLISKD-----------------KSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAP 680 (753)
Q Consensus 618 gL~yLH~~~IiHrDLKp~NILL~~d-----------------~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~AP 680 (753)
||+|||+.+|+||||||+|||+..+ ....+||+|||+++..... .....||+.|+||
T Consensus 135 ~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aP 208 (355)
T 2eu9_A 135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH------HTTIVATRHYRPP 208 (355)
T ss_dssp HHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC------CCSSCSCGGGCCH
T ss_pred HHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc------ccCCcCCCcccCC
Confidence 9999999999999999999999432 2345999999999875432 2345689999999
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Q 004442 681 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF 716 (753)
Q Consensus 681 E~l~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~ 716 (753)
|++.+..++.++|||||||++|||++| .+||....
T Consensus 209 E~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~ 243 (355)
T 2eu9_A 209 EVILELGWAQPCDVWSIGCILFEYYRG-FTLFQTHE 243 (355)
T ss_dssp HHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSS
T ss_pred eeeecCCCCCccchHHHHHHHHHHHhC-CCCCCCCC
Confidence 999999999999999999999999998 66776653
No 242
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.8e-35 Score=307.44 Aligned_cols=238 Identities=24% Similarity=0.423 Sum_probs=176.8
Q ss_pred ecceEEEeEEecccCceEEEEEEee-CCcEEEEEEeecCCc--hHHHHHHHHHHHhCCCCceeeecccccC---------
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESD--------- 538 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~L~g~~~~--------- 538 (753)
+.++|.+.+.||+|+||.||++... +|+.||||++..... +...+|+ .+++.++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV-MLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHH-HHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHH-HHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 4567899999999999999999764 699999999965322 2334444 47889999999999998754
Q ss_pred ----CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHH
Q 004442 539 ----QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRD 614 (753)
Q Consensus 539 ----~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~q 614 (753)
.+..++||| |+++|+|.+++.... ..+++..+++++.|
T Consensus 83 ~~~~~~~~~lv~e----------~~~~~~L~~~l~~~~----------------------------~~~~~~~~~~i~~q 124 (303)
T 1zy4_A 83 AVKKKSTLFIQME----------YCENGTLYDLIHSEN----------------------------LNQQRDEYWRLFRQ 124 (303)
T ss_dssp ---CEEEEEEEEE----------CCCSCBHHHHHHHSC----------------------------GGGCHHHHHHHHHH
T ss_pred ccccCCceEEEEe----------cCCCCCHHHhhhccc----------------------------cccchHHHHHHHHH
Confidence 467899999 666788888775421 23456778999999
Q ss_pred HHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCc-----------ccccCccCCCCccccccccc
Q 004442 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS-----------CLTQNATGYGSSGWQAPEQL 683 (753)
Q Consensus 615 Ia~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~-----------~~~~~~~~~GT~~Y~APE~l 683 (753)
++.||+|||+.+|+||||||+||+++.++. +||+|||+++....... .........||+.|+|||++
T Consensus 125 i~~~l~~LH~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 202 (303)
T 1zy4_A 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRN--VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202 (303)
T ss_dssp HHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECCCCCCSCTTC-------------------------CTTSCHHHH
T ss_pred HHHHHHHHHhCCeecccCCHHhEEEcCCCC--EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccc
Confidence 999999999999999999999999977764 99999999987643211 01122344689999999999
Q ss_pred cCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHccCcc----cccCCCHHHHHHHHHccccCcCCC
Q 004442 684 LQG-RQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 684 ~~~-~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~--~~~~~~i~~~~~~----~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
.+. .++.++|||||||++|||++ ||.... ......+...... .....++++.++|.+||+.||++|
T Consensus 203 ~~~~~~~~~~Di~slG~il~~l~~----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 275 (303)
T 1zy4_A 203 DGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKR 275 (303)
T ss_dssp TSCSCCCTHHHHHHHHHHHHHHHS----CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGS
T ss_pred cCCCCCcchhhHHHHHHHHHHHHh----ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccC
Confidence 865 68999999999999999998 343321 2222333333222 334556789999999999999998
No 243
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.9e-35 Score=317.94 Aligned_cols=198 Identities=21% Similarity=0.349 Sum_probs=156.3
Q ss_pred cceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCC--chHHHHHHHHHHHhCC-----------CCceeeeccccc
Q 004442 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--HDVALKEIQNLIASDQ-----------HPNIVRWYGVES 537 (753)
Q Consensus 472 ~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~-----------HpNIV~L~g~~~ 537 (753)
.++|.+.+.||+|+||+||++.. .+++.||||++.... .....+|+. ++..++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~-~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK-LLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHH-HHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHH-HHHHhhcccccchhccccchHHHHHHHhh
Confidence 45799999999999999999976 568999999997543 223344544 444443 899999999987
Q ss_pred CCc----eEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHH
Q 004442 538 DQD----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (753)
Q Consensus 538 ~~~----~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~ 613 (753)
..+ ..++|||+| +|+|.+++... ....+++..+++++.
T Consensus 97 ~~~~~~~~~~lv~e~~-----------~~~L~~~~~~~---------------------------~~~~~~~~~~~~i~~ 138 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-----------GENLLALIKKY---------------------------EHRGIPLIYVKQISK 138 (373)
T ss_dssp EEETTEEEEEEEECCC-----------CEEHHHHHHHT---------------------------TTSCCCHHHHHHHHH
T ss_pred ccCCCCceEEEEEecC-----------CCCHHHHHHHh---------------------------hccCCcHHHHHHHHH
Confidence 654 789999955 44555554322 124578889999999
Q ss_pred HHHHHHHHhhhC-CccccCCCCCcEEEecC----CCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCC
Q 004442 614 DIVSGLSHLHEI-GLIHRDLKPQNVLISKD----KSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ 688 (753)
Q Consensus 614 qIa~gL~yLH~~-~IiHrDLKp~NILL~~d----~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 688 (753)
||+.||+|||++ +|+||||||+|||++.+ ....+||+|||+++..... .....||+.|+|||++.+..+
T Consensus 139 qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~ 212 (373)
T 1q8y_A 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH------YTNSIQTREYRSPEVLLGAPW 212 (373)
T ss_dssp HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC------CCSCCSCGGGCCHHHHHTCCC
T ss_pred HHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC------CCCCCCCccccCcHHHhCCCC
Confidence 999999999998 99999999999999643 2346999999999876432 233468999999999999999
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCC
Q 004442 689 TRAIDLFSLGCILFFCITGGKHPYGES 715 (753)
Q Consensus 689 t~ksDIwSfGvvL~EllTG~~~Pf~~~ 715 (753)
+.++|||||||++|||+|| .+||...
T Consensus 213 ~~~~Di~slG~il~el~~g-~~pf~~~ 238 (373)
T 1q8y_A 213 GCGADIWSTACLIFELITG-DFLFEPD 238 (373)
T ss_dssp CTHHHHHHHHHHHHHHHHS-SCCC---
T ss_pred CchHhHHHHHHHHHHHHhC-CCCCCCC
Confidence 9999999999999999998 6788643
No 244
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.5e-35 Score=310.83 Aligned_cols=239 Identities=17% Similarity=0.144 Sum_probs=181.6
Q ss_pred eecceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC-----chHHHHHHHHHHHhCCCCceeeecccccCCceEEE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~L 544 (753)
...++|.+.+.||+|+||.||++.... .||||++.... .+.+.+|+. +++.++|+||+++++++.+.+..++
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVM-AYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGG-GGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHH-HHhcCCCCCEeEEEEEEecCCceEE
Confidence 334678889999999999999987643 49999986432 123344554 7788999999999999999999999
Q ss_pred EEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 004442 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (753)
Q Consensus 545 V~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~ 624 (753)
||| |+.+|+|.+++... ...+++.++++++.||+.||+|||+
T Consensus 107 v~e----------~~~~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~al~~lH~ 148 (319)
T 2y4i_B 107 ITS----------LCKGRTLYSVVRDA----------------------------KIVLDVNKTRQIAQEIVKGMGYLHA 148 (319)
T ss_dssp ECB----------CCCSEEHHHHTTSS----------------------------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred Eee----------cccCCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 66677888777432 2347788899999999999999999
Q ss_pred CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCc--ccccCccCCCCccccccccccC---------CCCCchhh
Q 004442 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS--CLTQNATGYGSSGWQAPEQLLQ---------GRQTRAID 693 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~--~~~~~~~~~GT~~Y~APE~l~~---------~~~t~ksD 693 (753)
.+|+||||||+||+++ ++ .+||+|||+++....... .........||+.|+|||++.+ ..++.++|
T Consensus 149 ~~i~H~dlkp~NIl~~-~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~D 225 (319)
T 2y4i_B 149 KGILHKDLKSKNVFYD-NG--KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSD 225 (319)
T ss_dssp TTCCCCCCCSTTEEEC-----CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHH
T ss_pred CCccccCCChhhEEEe-CC--CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhh
Confidence 9999999999999996 33 489999999876532111 1122233458999999999874 45789999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHccCcc--cccCCCHHHHHHHHHccccCcCCC
Q 004442 694 LFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 694 IwSfGvvL~EllTG~~~Pf~~~~~-~~~~~i~~~~~~--~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||||||++|||++| ..||..... .....+.....+ ....+++++.++|.+||+.||++|
T Consensus 226 i~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 287 (319)
T 2y4i_B 226 VFALGTIWYELHAR-EWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEER 287 (319)
T ss_dssp HHHHHHHHHHHHHS-SCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTS
T ss_pred HHHHHHHHHHHHhC-CCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhC
Confidence 99999999999998 667766543 333333333332 233578899999999999999998
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.5e-34 Score=337.91 Aligned_cols=227 Identities=29% Similarity=0.432 Sum_probs=177.8
Q ss_pred cceecceEEEeEEecccCceEEEEEEee--CCcEEEEEEeecCCch----HHHHHHHHHHHhCCCCceeeecccccCCce
Q 004442 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY--EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (753)
Q Consensus 468 ~~~i~~~~~i~~~IG~G~fG~Vyka~~~--~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~ 541 (753)
+..+.++|.+.+.||+|+||+||++... +|+.||||++...... .+.+|+ .+++.++||||++++++|.+.+.
T Consensus 75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~~~~~~ 153 (681)
T 2pzi_A 75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAER-QFLAEVVHPSIVQIFNFVEHTDR 153 (681)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHH-GGGGGCCCTTBCCEEEEEEEECT
T ss_pred CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHH-HHHHhcCCCCcCeEeeeEeecCC
Confidence 3556788999999999999999999775 5899999998654322 223444 47789999999999999887655
Q ss_pred -----EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHH
Q 004442 542 -----VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (753)
Q Consensus 542 -----~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa 616 (753)
.||||| |+++|+|.+++. ..+++.+++.|+.||+
T Consensus 154 ~~~~~~~lv~E----------~~~g~~L~~~~~-------------------------------~~l~~~~~~~~~~qi~ 192 (681)
T 2pzi_A 154 HGDPVGYIVME----------YVGGQSLKRSKG-------------------------------QKLPVAEAIAYLLEIL 192 (681)
T ss_dssp TSCEEEEEEEE----------CCCCEECC-----------------------------------CCCCHHHHHHHHHHHH
T ss_pred CCCceeEEEEE----------eCCCCcHHHHHh-------------------------------CCCCHHHHHHHHHHHH
Confidence 799999 666677765432 2578899999999999
Q ss_pred HHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHH
Q 004442 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFS 696 (753)
Q Consensus 617 ~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwS 696 (753)
.||.|||+.+|+||||||+|||++.+ .+||+|||+++..... ...+||+.|+|||++.+.. +.++||||
T Consensus 193 ~aL~~lH~~giiHrDlkp~NIll~~~---~~kl~DFG~a~~~~~~-------~~~~gt~~y~aPE~~~~~~-~~~sDi~s 261 (681)
T 2pzi_A 193 PALSYLHSIGLVYNDLKPENIMLTEE---QLKLIDLGAVSRINSF-------GYLYGTPGFQAPEIVRTGP-TVATDIYT 261 (681)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECSS---CEEECCCTTCEETTCC-------SCCCCCTTTSCTTHHHHCS-CHHHHHHH
T ss_pred HHHHHHHHCCCeecccChHHeEEeCC---cEEEEecccchhcccC-------CccCCCccccCHHHHcCCC-CCceehhh
Confidence 99999999999999999999999764 4899999999876532 3456899999999987654 89999999
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHccccCcCCC
Q 004442 697 LGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 697 fGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
|||++|||++| .+||........ .........++++.++|.+||++||++|
T Consensus 262 lG~~l~~l~~g-~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~R 312 (681)
T 2pzi_A 262 VGRTLAALTLD-LPTRNGRYVDGL-----PEDDPVLKTYDSYGRLLRRAIDPDPRQR 312 (681)
T ss_dssp HHHHHHHHHSC-CCEETTEECSSC-----CTTCHHHHHCHHHHHHHHHHTCSSGGGS
T ss_pred hHHHHHHHHhC-CCCCcccccccc-----cccccccccCHHHHHHHhhhccCChhhC
Confidence 99999999998 666654311100 0001111235789999999999999998
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8.2e-33 Score=294.11 Aligned_cols=216 Identities=23% Similarity=0.348 Sum_probs=167.9
Q ss_pred ceEEEe-EEecccCceEEEEEEe-eCCcEEEEEEeecCCchHHHHHHHHHHHhCCCCceeeecccccC----CceEEEEE
Q 004442 473 KLVVFN-KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYLSL 546 (753)
Q Consensus 473 ~~~~i~-~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~L~g~~~~----~~~~~LV~ 546 (753)
+.|.+. +.||+|+||.||++.. .+++.||||++... ....+|+..+.+..+||||+++++++.+ ....++||
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 94 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 94 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEE
Confidence 445555 8899999999999976 46899999999754 4566777766688899999999999876 77899999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~ 626 (753)
| |+++|+|.+++.... ...+++..++.++.|++.||+|||+.+
T Consensus 95 e----------~~~~~~L~~~l~~~~---------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ 137 (299)
T 3m2w_A 95 E----------CLDGGELFSRIQDRG---------------------------DQAFTEREASEIMKSIGEAIQYLHSIN 137 (299)
T ss_dssp C----------CCCSCBHHHHHHHCT---------------------------TCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred e----------ecCCCcHHHHHHhcc---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 666778888775421 235788899999999999999999999
Q ss_pred ccccCCCCCcEEEecCC-CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 004442 627 LIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 705 (753)
Q Consensus 627 IiHrDLKp~NILL~~d~-~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~Ell 705 (753)
|+||||||+||+++.++ +..+||+|||++.... +..++.++|||||||++|||+
T Consensus 138 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-------------------------~~~~~~~~DiwslG~il~el~ 192 (299)
T 3m2w_A 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------------------------GEKYDKSCDMWSLGVIMYILL 192 (299)
T ss_dssp EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-------------------------TCGGGGHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHEEEecCCCCCcEEEeccccccccc-------------------------cccCCchhhHHHHHHHHHHHH
Confidence 99999999999997632 3469999999987542 234678999999999999999
Q ss_pred hCCCCCCCCChHHHHH-----HHHccCcccc----cCCCHHHHHHHHHccccCcCCC
Q 004442 706 TGGKHPYGESFERDAN-----IVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 706 TG~~~Pf~~~~~~~~~-----~i~~~~~~~~----~~~s~el~dLI~~cL~~DP~~R 753 (753)
|| .+||......... .+.......+ ..+++++.+||.+||+.||++|
T Consensus 193 tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 248 (299)
T 3m2w_A 193 CG-YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR 248 (299)
T ss_dssp HS-SCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred HC-CCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhC
Confidence 98 6677654322211 0011111112 4678999999999999999998
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.7e-33 Score=295.43 Aligned_cols=209 Identities=12% Similarity=0.069 Sum_probs=163.1
Q ss_pred eecceEEEeEEecccCceEEEEEEeeC-CcEEEEEEeecCCc------hHHHHHHHHHHHhCCCCceeeecccccCCceE
Q 004442 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (753)
Q Consensus 470 ~i~~~~~i~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~ 542 (753)
.+.++|.+.+.||+|+||.||++.... |+.||||++..... ..+.+|+. .++.++|+||+++++++.+++..
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~hp~iv~~~~~~~~~~~~ 106 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTL-RLSRIDKPGVARVLDVVHTRAGG 106 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEEETTEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHH-HHhcCCCCCcceeeEEEEECCcE
Confidence 456779999999999999999997754 89999999976432 23445554 67999999999999999999999
Q ss_pred EEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q 004442 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 543 ~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yL 622 (753)
|+||| |+++|+|.+++.. .....++.+|+.|++.||+||
T Consensus 107 ~lv~e----------~~~g~~L~~~l~~-------------------------------~~~~~~~~~i~~ql~~aL~~l 145 (286)
T 3uqc_A 107 LVVAE----------WIRGGSLQEVADT-------------------------------SPSPVGAIRAMQSLAAAADAA 145 (286)
T ss_dssp EEEEE----------CCCEEEHHHHHTT-------------------------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE----------ecCCCCHHHHHhc-------------------------------CCChHHHHHHHHHHHHHHHHH
Confidence 99999 6667777777632 123345688999999999999
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~ 702 (753)
|++||+||||||+|||++.++. +||+++| |++ .++.++|||||||++|
T Consensus 146 H~~givH~Dikp~NIll~~~g~--~kl~~~~-----------------------~~~-------~~~~~~Di~slG~il~ 193 (286)
T 3uqc_A 146 HRAGVALSIDHPSRVRVSIDGD--VVLAYPA-----------------------TMP-------DANPQDDIRGIGASLY 193 (286)
T ss_dssp HHTTCCCCCCSGGGEEEETTSC--EEECSCC-----------------------CCT-------TCCHHHHHHHHHHHHH
T ss_pred HHCCCccCCCCcccEEEcCCCC--EEEEecc-----------------------ccC-------CCCchhHHHHHHHHHH
Confidence 9999999999999999988875 7887433 333 3789999999999999
Q ss_pred HHHhCCCCCCCCChHHH-H---HHHHccCc----ccccCCCHHHHHHHHHccccCcCCC
Q 004442 703 FCITGGKHPYGESFERD-A---NIVKDRKD----LFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 703 EllTG~~~Pf~~~~~~~-~---~~i~~~~~----~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
||+|| ++||.+..... . ........ .....+++++.++|.+||++||++|
T Consensus 194 elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 251 (286)
T 3uqc_A 194 ALLVN-RWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR 251 (286)
T ss_dssp HHHHS-EECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC
T ss_pred HHHHC-CCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC
Confidence 99998 67876543211 0 00001111 1235678999999999999999998
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.4e-33 Score=310.97 Aligned_cols=237 Identities=16% Similarity=0.122 Sum_probs=166.5
Q ss_pred ecceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc-----hHHHHHHHHHHHhCCC-Cceeeecc---------
Q 004442 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQH-PNIVRWYG--------- 534 (753)
Q Consensus 471 i~~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~H-pNIV~L~g--------- 534 (753)
..+.|...+.||+|+||+||+|.. .+|+.||||++..... ...++++..++..++| +|......
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 345688899999999999999975 4699999999873221 2234444446677776 32221111
Q ss_pred ------------cccC-----CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhh
Q 004442 535 ------------VESD-----QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597 (753)
Q Consensus 535 ------------~~~~-----~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (753)
++.. ....+++|+++.++|.+++ .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll-----------~~l~~~~---------------------- 202 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFG-----------EVLLSHS---------------------- 202 (413)
T ss_dssp EEECCC---------------CCSEEEEEECCSEEHHHHH-----------HHHHHHT----------------------
T ss_pred hcccCCCCccccccCCCccccccceEEEeehhcCCHHHHH-----------HHhhccc----------------------
Confidence 1111 1236778886665555444 2111000
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccc
Q 004442 598 WKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGW 677 (753)
Q Consensus 598 ~~~~~l~~~~~l~Ia~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y 677 (753)
.....+++..++.|+.||++||+|||+.+|+||||||+|||++.++. +||+|||+++..... ....+| +.|
T Consensus 203 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~--~kL~DFG~a~~~~~~------~~~~~g-~~y 273 (413)
T 3dzo_A 203 STHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG--VFLTGFEHLVRDGAS------AVSPIG-RGF 273 (413)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCGGGCEETTEE------ECCCCC-TTT
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCe--EEEEeccceeecCCc------cccCCC-Cce
Confidence 01223556778999999999999999999999999999999987765 999999999875432 234567 999
Q ss_pred cccccc----------cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHccc
Q 004442 678 QAPEQL----------LQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLD 747 (753)
Q Consensus 678 ~APE~l----------~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~ 747 (753)
+|||++ ....++.++|||||||++|||+|| +.||......... .........+++++.+||.+||+
T Consensus 274 ~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg-~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~ 349 (413)
T 3dzo_A 274 APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA-DLPNTDDAALGGS---EWIFRSCKNIPQPVRALLEGFLR 349 (413)
T ss_dssp CCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS-SCCCCTTGGGSCS---GGGGSSCCCCCHHHHHHHHHHTC
T ss_pred eCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC-CCCCCCcchhhhH---HHHHhhcccCCHHHHHHHHHHcc
Confidence 999999 555688999999999999999998 6788665332110 01111224678999999999999
Q ss_pred cCcCCC
Q 004442 748 PNPDLR 753 (753)
Q Consensus 748 ~DP~~R 753 (753)
.||++|
T Consensus 350 ~dP~~R 355 (413)
T 3dzo_A 350 YPKEDR 355 (413)
T ss_dssp SSGGGS
T ss_pred CChhhC
Confidence 999998
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=7.6e-34 Score=307.11 Aligned_cols=225 Identities=15% Similarity=0.132 Sum_probs=164.8
Q ss_pred ceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----------hHHHHHHHHHHHhCC---------CCcee--
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQ---------HPNIV-- 530 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~---------HpNIV-- 530 (753)
++|.+.+.||+|+||+||+|.. +|+.||||++..... +...+|+. +++.++ |+|||
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEII-ISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHH-HHHHHHHGGGCSSSBCCCBCCE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHH-HHHHHHHhhccccccCCchhhh
Confidence 4566778999999999999977 789999999975431 44556665 445554 55554
Q ss_pred ---------------eecccccC-------------CceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhh
Q 004442 531 ---------------RWYGVESD-------------QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582 (753)
Q Consensus 531 ---------------~L~g~~~~-------------~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~ 582 (753)
++++++.+ .+..||||||| .+|++.+.+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~----------~~g~ll~~~~------------- 154 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE----------FGGIDLEQMR------------- 154 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEE----------CCCEETGGGT-------------
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEec----------CCCccHHHHH-------------
Confidence 45555443 78899999954 4554433321
Q ss_pred hhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh-hCCccccCCCCCcEEEecCC------------------
Q 004442 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQNVLISKDK------------------ 643 (753)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH-~~~IiHrDLKp~NILL~~d~------------------ 643 (753)
...+++..+..|+.||+.||+||| +.+|+||||||+|||++.++
T Consensus 155 -----------------~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
T 2vuw_A 155 -----------------TKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSC 217 (336)
T ss_dssp -----------------TTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECT
T ss_pred -----------------hcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCC
Confidence 134688899999999999999999 89999999999999998875
Q ss_pred CCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCh--HHHH
Q 004442 644 SFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI-LFFCITGGKHPYGESF--ERDA 720 (753)
Q Consensus 644 ~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv-L~EllTG~~~Pf~~~~--~~~~ 720 (753)
...+||+|||+|+..... ..+||+.|+|||++.+.. +.++|||||+++ .+++++| ..||.+.. ....
T Consensus 218 ~~~vkL~DFG~a~~~~~~--------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g-~~p~~~~~~~~~~~ 287 (336)
T 2vuw_A 218 GLQVSIIDYTLSRLERDG--------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGE-YHPYSNVLWLHYLT 287 (336)
T ss_dssp TEEEEECCCTTCBEEETT--------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTS-CCTHHHHHHHHHHH
T ss_pred CceEEEeeccccEecCCC--------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccc-cCCCcchhhhhHHH
Confidence 236999999999876532 236899999999998766 999999998777 6677777 67875421 1111
Q ss_pred HHHH-ccC------cccccCCCHHHHHHHHHccccC
Q 004442 721 NIVK-DRK------DLFLVEHIPEAVDLFTRLLDPN 749 (753)
Q Consensus 721 ~~i~-~~~------~~~~~~~s~el~dLI~~cL~~D 749 (753)
..+. ... ...+..+++++.+||++||+.|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 288 DKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp HHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred HhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC
Confidence 1221 111 1123356789999999999987
No 250
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=1e-32 Score=323.03 Aligned_cols=239 Identities=26% Similarity=0.344 Sum_probs=181.5
Q ss_pred ceEEEeEEecccCceEEEEEEe-eCCcEEEEEEeecCCc----hHHHHHHHHHHHhCCCCceeeecccccC------Cce
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD------QDF 541 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~L~g~~~~------~~~ 541 (753)
++|.+.+.||+|+||.||++.. .+|+.||||++..... +.+.+|+. +++.++||||+++++++.+ .+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~-iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQ-IMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHH-HHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHH-HHHhCCCCCCCceeeeecccccccCCCe
Confidence 5678889999999999999876 4589999999875432 23344554 7899999999999999765 677
Q ss_pred EEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q 004442 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (753)
Q Consensus 542 ~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~y 621 (753)
.++||| |+.+|+|.+++..... ...+++..++.|+.+++.||+|
T Consensus 93 ~~LVmE----------y~~ggsL~~~L~~~~~--------------------------~~~lse~~i~~I~~QLl~aL~y 136 (676)
T 3qa8_A 93 PLLAME----------YCEGGDLRKYLNQFEN--------------------------CCGLKEGPIRTLLSDISSALRY 136 (676)
T ss_dssp CCCEEE----------CCSSCBHHHHHHSSSC--------------------------TTCCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEE----------eCCCCCHHHHHHhccc--------------------------CCCCCHHHHHHHHHHHHHHHHH
Confidence 899999 6777888888764321 2357778889999999999999
Q ss_pred hhhCCccccCCCCCcEEEecCCC-CeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHH
Q 004442 622 LHEIGLIHRDLKPQNVLISKDKS-FCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 700 (753)
Q Consensus 622 LH~~~IiHrDLKp~NILL~~d~~-~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvv 700 (753)
||+.+|+||||||+||+++.++. ..+||+|||++....... ......||+.|+|||++.+..++.++|||||||+
T Consensus 137 LHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~----~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGvi 212 (676)
T 3qa8_A 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTL 212 (676)
T ss_dssp HHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC----CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHH
T ss_pred HHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc----ccccccCCcccCChHHhccCCCCchhHHHHHHHH
Confidence 99999999999999999987653 468999999998765432 2234568999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHH----------HH-H----HccC----------cccccCCCHHHHHHHHHccccCcCCC
Q 004442 701 LFFCITGGKHPYGESFERDA----------NI-V----KDRK----------DLFLVEHIPEAVDLFTRLLDPNPDLR 753 (753)
Q Consensus 701 L~EllTG~~~Pf~~~~~~~~----------~~-i----~~~~----------~~~~~~~s~el~dLI~~cL~~DP~~R 753 (753)
+|||++| ..||........ .. . .... ......+++++.+||.+||..||++|
T Consensus 213 LyeLltG-~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kR 289 (676)
T 3qa8_A 213 AFECITG-FRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQR 289 (676)
T ss_dssp HHHHHSS-CSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC--
T ss_pred HHHHHHC-CCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhC
Confidence 9999999 567754322111 00 0 0000 01122346789999999999999998
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=1.1e-26 Score=269.70 Aligned_cols=180 Identities=15% Similarity=0.084 Sum_probs=119.4
Q ss_pred EEecccCceEEEEE-EeeCCcEEEEEEeecCC-------------chHHHHHHHHHHHhC-CCCceeeecccccCCceEE
Q 004442 479 KEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-------------HDVALKEIQNLIASD-QHPNIVRWYGVESDQDFVY 543 (753)
Q Consensus 479 ~~IG~G~fG~Vyka-~~~~g~~VAVK~l~~~~-------------~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~ 543 (753)
...+.|+.|.+..+ +..-|+.+|||.+.+.. .+++.+|+. +|+++ .|+||+++++++.+++..|
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~~~~~~~i~~~~~~~ed~~~~y 318 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIK-FLTQPPAGFDAPAVLAHGENAQSGW 318 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHH-HHHSCCTTCCCCCEEEEEECSSEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHH-HHHhcCCCCCeeEEEEEEEECCEEE
Confidence 34677888877664 44569999999996532 122444554 67776 7999999999999999999
Q ss_pred EEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhh
Q 004442 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (753)
Q Consensus 544 LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH 623 (753)
|||| |+++|+|.++|... ..++. .+|+.||+.||+|||
T Consensus 319 LVME----------yv~G~~L~d~i~~~-----------------------------~~l~~---~~I~~QIl~AL~ylH 356 (569)
T 4azs_A 319 LVME----------KLPGRLLSDMLAAG-----------------------------EEIDR---EKILGSLLRSLAALE 356 (569)
T ss_dssp EEEE----------CCCSEEHHHHHHTT-----------------------------CCCCH---HHHHHHHHHHHHHHH
T ss_pred EEEe----------cCCCCcHHHHHHhC-----------------------------CCCCH---HHHHHHHHHHHHHHH
Confidence 9999 77788888887532 23333 358899999999999
Q ss_pred hCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCCCCCchhhHHHHHHHHHH
Q 004442 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 703 (753)
Q Consensus 624 ~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDIwSfGvvL~E 703 (753)
++|||||||||+||||+.++. +||+|||+|+...... ....+.+||++|||||++.+ .+..++|+||+|+++++
T Consensus 357 ~~GIIHRDIKPeNILL~~dg~--vKL~DFGlAr~~~~~~---~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~ 430 (569)
T 4azs_A 357 KQGFWHDDVRPWNVMVDARQH--ARLIDFGSIVTTPQDC---SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFN 430 (569)
T ss_dssp HTTCEESCCCGGGEEECTTSC--EEECCCTTEESCC------CCSHHHHHHHHHHHHHHC------------------CC
T ss_pred HCCceeccCchHhEEECCCCC--EEEeecccCeeCCCCC---ccccCceechhhccHHHhCC-CCCCcccccccccchhh
Confidence 999999999999999988765 9999999998775432 23345679999999999865 46778999999998877
Q ss_pred HHhC
Q 004442 704 CITG 707 (753)
Q Consensus 704 llTG 707 (753)
+.++
T Consensus 431 l~~~ 434 (569)
T 4azs_A 431 LPQP 434 (569)
T ss_dssp CCTT
T ss_pred hccc
Confidence 6554
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88 E-value=3.8e-24 Score=246.84 Aligned_cols=182 Identities=18% Similarity=0.169 Sum_probs=136.5
Q ss_pred EeEEecccCceEEEEEEeeCCcEEEEEEeecCCc-----------hHHHHHHHHHHHhCCCCceeeecccccCCceEEEE
Q 004442 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (753)
Q Consensus 477 i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~~~~LV 545 (753)
..+.||+|+||+||++ ...++.+|+|+...... +.+.+|+. +++.++||||+++..++.+.+..|||
T Consensus 340 ~~~~LG~G~fg~Vy~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 340 PEHLIGKGAEADIKRD-SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREAR-YLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp --------CCEEEEEE-ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHH-HHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCEEeeCCCEEEEEE-EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHH-HHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3568999999999998 55688999998743221 11344554 78899999999777777777788999
Q ss_pred EccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhhC
Q 004442 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (753)
Q Consensus 546 ~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~~ 625 (753)
|| |+++|+|.+++.. +++++.|+++||+|||++
T Consensus 418 mE----------~~~ggsL~~~l~~-------------------------------------~~~i~~qi~~aL~~LH~~ 450 (540)
T 3en9_A 418 MS----------YINGKLAKDVIED-------------------------------------NLDIAYKIGEIVGKLHKN 450 (540)
T ss_dssp EE----------CCCSEEHHHHSTT-------------------------------------CTHHHHHHHHHHHHHHHT
T ss_pred EE----------CCCCCCHHHHHHH-------------------------------------HHHHHHHHHHHHHHHHHC
Confidence 99 6677888887643 268999999999999999
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccc----cCccCCCCccccccccccC--CCCCchhhHHHHHH
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT----QNATGYGSSGWQAPEQLLQ--GRQTRAIDLFSLGC 699 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~----~~~~~~GT~~Y~APE~l~~--~~~t~ksDIwSfGv 699 (753)
+|+||||||+|||++. .+||+|||+++.......... .....+||+.|||||++.. ..|+..+|+|+..+
T Consensus 451 gIiHrDiKp~NILl~~----~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl 526 (540)
T 3en9_A 451 DVIHNDLTTSNFIFDK----DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIIL 526 (540)
T ss_dssp TEECTTCCTTSEEESS----SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHH
T ss_pred cCccCCCCHHHEEECC----eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999965 599999999998754211110 1134568999999999987 56788899999999
Q ss_pred HHHHHHhCCCCCC
Q 004442 700 ILFFCITGGKHPY 712 (753)
Q Consensus 700 vL~EllTG~~~Pf 712 (753)
-..+-+.+ +.+|
T Consensus 527 ~~l~~v~~-r~rY 538 (540)
T 3en9_A 527 ELMKDVER-RARY 538 (540)
T ss_dssp HHHHHHHT-CSCC
T ss_pred HHHHHHHh-cccc
Confidence 88888876 4455
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=4.1e-21 Score=203.49 Aligned_cols=142 Identities=18% Similarity=0.095 Sum_probs=108.2
Q ss_pred ceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC---------------------chHHHHHHHHHHHhCCCCceee
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH---------------------HDVALKEIQNLIASDQHPNIVR 531 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~---------------------~~~~~~Ei~~ll~~l~HpNIV~ 531 (753)
..|.+.+.||+|+||.||++...+|+.||||.++... ...+.+|+. +++.++ | ++
T Consensus 90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~-~l~~l~--~-~~ 165 (282)
T 1zar_A 90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR-ALQKLQ--G-LA 165 (282)
T ss_dssp SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHH-HHHHTT--T-SS
T ss_pred eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHH-HHHhcc--C-CC
Confidence 4466779999999999999988779999999996422 112345555 677777 5 67
Q ss_pred ecccccCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHH
Q 004442 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKV 611 (753)
Q Consensus 532 L~g~~~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~I 611 (753)
+.+++ +.+..++||| |+++|+|.+ +.. .....+
T Consensus 166 v~~~~-~~~~~~lvmE----------~~~g~~L~~-l~~-----------------------------------~~~~~i 198 (282)
T 1zar_A 166 VPKVY-AWEGNAVLME----------LIDAKELYR-VRV-----------------------------------ENPDEV 198 (282)
T ss_dssp SCCEE-EEETTEEEEE----------CCCCEEGGG-CCC-----------------------------------SCHHHH
T ss_pred cCeEE-eccceEEEEE----------ecCCCcHHH-cch-----------------------------------hhHHHH
Confidence 77754 3456799999 566666665 311 012579
Q ss_pred HHHHHHHHHHhhhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCcccccccccc
Q 004442 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL 684 (753)
Q Consensus 612 a~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 684 (753)
+.|++.||.|||+.+|+||||||+|||++ ++ .+||+|||+|+. +..++|||.+.
T Consensus 199 ~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~--~vkl~DFG~a~~----------------~~~~~a~e~l~ 252 (282)
T 1zar_A 199 LDMILEEVAKFYHRGIVHGDLSQYNVLVS-EE--GIWIIDFPQSVE----------------VGEEGWREILE 252 (282)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSTTSEEEE-TT--EEEECCCTTCEE----------------TTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CC--cEEEEECCCCeE----------------CCCCCHHHHHH
Confidence 99999999999999999999999999998 54 599999999974 34578999874
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=2e-17 Score=172.53 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=96.7
Q ss_pred eEEEeEEecccCceEEEEEEe-eCCcE--EEEEEeecCCc---------------------------hHHHHHHHHHHHh
Q 004442 474 LVVFNKEIAKGSNGTVVLEGN-YEGRS--VAVKRLVKTHH---------------------------DVALKEIQNLIAS 523 (753)
Q Consensus 474 ~~~i~~~IG~G~fG~Vyka~~-~~g~~--VAVK~l~~~~~---------------------------~~~~~Ei~~ll~~ 523 (753)
.|.+.+.||+|+||.||+|.. .+|+. ||||+++.... ....+|.. .+..
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~ 126 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFR-NLER 126 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHH-HHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHH-HHHH
Confidence 467889999999999999987 68999 99998754310 12344544 6677
Q ss_pred CCCCce--eeecccccCCceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcC
Q 004442 524 DQHPNI--VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKAN 601 (753)
Q Consensus 524 l~HpNI--V~L~g~~~~~~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (753)
++|+|| ...+++ +..+||||||+++- ....+|.++...
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g-----~~~~~L~~~~~~------------------------------- 166 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDE-----LPAPTLVELGRE------------------------------- 166 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETT-----EECCBHHHHGGG-------------------------------
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCC-----CccccHHHHhhc-------------------------------
Confidence 777654 233322 35689999653110 000144433211
Q ss_pred CCCHHHHHHHHHHHHHHHHHhh-hCCccccCCCCCcEEEecCCCCeEEEEeccCceec
Q 004442 602 GHPSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (753)
Q Consensus 602 ~l~~~~~l~Ia~qIa~gL~yLH-~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~ 658 (753)
.++..+..++.|++.||.||| +.+|+||||||.|||++. .++|+|||+|...
T Consensus 167 -~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~----~~~liDFG~a~~~ 219 (258)
T 1zth_A 167 -LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID----KVYFIDMGQAVTL 219 (258)
T ss_dssp -GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS----SEEECCCTTCEET
T ss_pred -cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC----cEEEEECcccccC
Confidence 012234789999999999999 999999999999999965 4999999999764
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.55 E-value=1.7e-15 Score=166.57 Aligned_cols=140 Identities=13% Similarity=0.160 Sum_probs=96.4
Q ss_pred eEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCC----------------chHHHHHHHHHHHhCCCCceeeeccccc
Q 004442 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH----------------HDVALKEIQNLIASDQHPNIVRWYGVES 537 (753)
Q Consensus 474 ~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~----------------~~~~~~Ei~~ll~~l~HpNIV~L~g~~~ 537 (753)
.|.+.+.||+|+||.||+|...+|+.||||+++... .......+..+.+...|+|+++++....
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 378899999999999999999999999999875321 0011111222333345666666654432
Q ss_pred CC------ceEEEEEccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHH
Q 004442 538 DQ------DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKV 611 (753)
Q Consensus 538 ~~------~~~~LV~E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~I 611 (753)
.- ...+||||||+ ++.|.++.. .+....+
T Consensus 176 ~vp~p~~~~~~~LVME~i~----------G~~L~~l~~-----------------------------------~~~~~~l 210 (397)
T 4gyi_A 176 PVPEPIAQSRHTIVMSLVD----------ALPMRQVSS-----------------------------------VPDPASL 210 (397)
T ss_dssp SCCCEEEEETTEEEEECCS----------CEEGGGCCC-----------------------------------CSCHHHH
T ss_pred CCCeeeeccCceEEEEecC----------CccHhhhcc-----------------------------------cHHHHHH
Confidence 21 22369999554 444432211 0122568
Q ss_pred HHHHHHHHHHhhhCCccccCCCCCcEEEecCCC--------CeEEEEeccCceec
Q 004442 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS--------FCAKLSDMGISKRL 658 (753)
Q Consensus 612 a~qIa~gL~yLH~~~IiHrDLKp~NILL~~d~~--------~~~KLsDFGla~~~ 658 (753)
+.|++.+|.|||+.|||||||||.|||++.++. ..+.|+||+.+...
T Consensus 211 ~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 211 YADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 899999999999999999999999999988763 24889999988764
No 256
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=99.39 E-value=2.4e-12 Score=139.25 Aligned_cols=174 Identities=21% Similarity=0.372 Sum_probs=125.9
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecCC--CC-cccccccCCCCCCceeeeccCCCceeeeeccccCceeeeccCHHH
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTG--RP-IYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (753)
.|+.+|++.||+||.+|..+|+.+|+|.++ +| +..+..+.. .+..++..+...|++||.-+...| ..+.+.+++.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~-~~~~~~vv~p~~dG~l~a~~~~~G-~~~~~~~~~~ 87 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRL-ETYETLIIEPFGDGNIYYFNAHQG-LQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTT-TSSEEEEECCSTTTEEEEEETTTE-EEEEEEEHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccc-cCCcEEEEEECCCCEEEEEECCCC-cEEeeecccc
Confidence 467899999999999999999999999997 44 444444333 233466677679999999998777 5668889999
Q ss_pred HHHhCcee-------------ecCCeeeeeceeeeEEEEecccccEEecccCCCCCCCCCCCcccCcceeccCCcchhhc
Q 004442 125 YIRRMPYI-------------SKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVE 191 (753)
Q Consensus 125 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (753)
++..+|+. +.||.|+.|++..+++++|++||+++..+.......++........++ ++
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~---------~d 158 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPE---------EK 158 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC-----------------------
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccc---------cc
Confidence 99999998 389999999999999999999999999976543322211000000011 00
Q ss_pred cccccccccccceEEEEeeeeeeecCCCCceEEEEeeecccceeee
Q 004442 192 SGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADFKAEFR 237 (753)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (753)
- +.+.....|.|-||+|.+-.++ ++|. .||+.++++.+...
T Consensus 159 ~---~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~ 199 (339)
T 2be1_A 159 I---KLQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVL 199 (339)
T ss_dssp ---------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTT
T ss_pred c---ccccCCCeEEEecceEEEEEEC-CCCC-eEEEeccccccccc
Confidence 0 0112335799999999999999 5698 99999988866433
No 257
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.89 E-value=3.3e-09 Score=109.54 Aligned_cols=75 Identities=11% Similarity=-0.028 Sum_probs=55.6
Q ss_pred EEEeEEecccCceEEEEEEeeCCcEEEEEEeec---CCchHHHHHHHHHHHhC-CCCceeeecccccCCceEEEEEcccc
Q 004442 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVK---THHDVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLSLERCT 550 (753)
Q Consensus 475 ~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~---~~~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~LV~E~c~ 550 (753)
|.+...++.|+.+.||+... .+..+++|+... .......+|.. ++..+ .|.++.++++++.+.+..|+|||+++
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~-~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKD-MMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp SEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHH-HHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred ceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHH-HHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 56677788899999998764 368999999864 22334555665 44544 46778889999888889999999555
Q ss_pred C
Q 004442 551 C 551 (753)
Q Consensus 551 ~ 551 (753)
+
T Consensus 94 G 94 (263)
T 3tm0_A 94 G 94 (263)
T ss_dssp S
T ss_pred C
Confidence 4
No 258
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.85 E-value=2.5e-09 Score=109.41 Aligned_cols=69 Identities=12% Similarity=-0.032 Sum_probs=49.1
Q ss_pred cccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHhCCCCc--eeeecccccCCceEEEEEccccC
Q 004442 482 AKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPN--IVRWYGVESDQDFVYLSLERCTC 551 (753)
Q Consensus 482 G~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpN--IV~L~g~~~~~~~~~LV~E~c~~ 551 (753)
+.|..+.||+....+|..++||...........+|.. ++..+.+.+ +.++++++.+++..++|||++++
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~-~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G 99 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAA-RLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 99 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHH-HHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHH-HHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCC
Confidence 4666799999877778889999986543334445554 445554434 45688888877889999997766
No 259
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.68 E-value=7.2e-08 Score=105.22 Aligned_cols=152 Identities=24% Similarity=0.450 Sum_probs=96.9
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (753)
..+...+++.||+|+++|..+|+.+|++.. .++.++ +...+..+ |+-+..|..||.-+...|+.. ++....++.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~---p~~~~g~~-~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQV---PTHVEEPA-FLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCC---C-----CC-EEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceec---ceEcCCCE-EEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 456778999999999999999999999998 454332 33233234 444568889999888888865 677778888
Q ss_pred HHhCceeecCCeeeeeceeeeEEEEecccccEEecccCCCCCCCCCCCcccCcceeccCCcchhhccccccccccccceE
Q 004442 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (753)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (753)
+..+|+++++|.|+.|+...+++++|++||+++..+........ .| ....|+
T Consensus 83 ~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~---------------------~p-------~~~~v~ 134 (369)
T 2hz6_A 83 VQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSL---------------------SP-------STSLLY 134 (369)
T ss_dssp HTTCSCC-----CCCCEEEEEEEEECCC--------------------------------------------------EE
T ss_pred cccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccc---------------------cc-------cCCEEE
Confidence 98999998889999999999999999999999987543221000 01 234678
Q ss_pred EEEeeeeeeecCCCCceEEEEeeecc
Q 004442 206 IMRTDYVLQSTSQDSGEVLWNVAYAD 231 (753)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (753)
+-.+|..+.-+.+++|+.+|+.....
T Consensus 135 ~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 135 LGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp EEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred EEecCCEEEEEECCCCCEEEeEeccc
Confidence 88899999999999999999987543
No 260
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.56 E-value=9.2e-08 Score=103.67 Aligned_cols=138 Identities=12% Similarity=0.185 Sum_probs=87.9
Q ss_pred eEEecccCceEEEEEEeeCCcEEEEEEee--cCC----chHHHHHHHHHHHhCC--CCceeeecccccCC---ceEEEEE
Q 004442 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLV--KTH----HDVALKEIQNLIASDQ--HPNIVRWYGVESDQ---DFVYLSL 546 (753)
Q Consensus 478 ~~~IG~G~fG~Vyka~~~~g~~VAVK~l~--~~~----~~~~~~Ei~~ll~~l~--HpNIV~L~g~~~~~---~~~~LV~ 546 (753)
.+.|+.|.++.||+.... +..+++|+.. ... .....+|.. +++.+. +..+.++++++.+. +..|+||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~-~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYR-VMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHH-HHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHH-HHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 466899999999987654 4688888876 321 123344544 555555 45578888888776 4589999
Q ss_pred ccccCChhhHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhcCCCCHHHHHHHHHHHHHHHHHhhh--
Q 004442 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-- 624 (753)
Q Consensus 547 E~c~~~L~~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~Ia~qIa~gL~yLH~-- 624 (753)
|++++ ..+.+. ....++..+...++.++++.|+.||+
T Consensus 121 e~v~G----------~~l~~~-------------------------------~~~~l~~~~~~~~~~~l~~~La~LH~~~ 159 (359)
T 3dxp_A 121 EFVSG----------RVLWDQ-------------------------------SLPGMSPAERTAIYDEMNRVIAAMHTVD 159 (359)
T ss_dssp ECCCC----------BCCCCT-------------------------------TCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred EecCC----------eecCCC-------------------------------ccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 96654 222110 00113334445555555555555554
Q ss_pred --------------------------------------------------------CCccccCCCCCcEEEecCCCCeEE
Q 004442 625 --------------------------------------------------------IGLIHRDLKPQNVLISKDKSFCAK 648 (753)
Q Consensus 625 --------------------------------------------------------~~IiHrDLKp~NILL~~d~~~~~K 648 (753)
..++|+|+++.||+++.++.-.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~ 239 (359)
T 3dxp_A 160 YQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLA 239 (359)
T ss_dssp TTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEE
T ss_pred chhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEE
Confidence 359999999999999876543468
Q ss_pred EEeccCceec
Q 004442 649 LSDMGISKRL 658 (753)
Q Consensus 649 LsDFGla~~~ 658 (753)
|.||+.+...
T Consensus 240 viDwe~a~~g 249 (359)
T 3dxp_A 240 VLDWELSTLG 249 (359)
T ss_dssp ECCCTTCEEE
T ss_pred EECccccccC
Confidence 9999998764
No 261
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.34 E-value=1.3e-07 Score=100.16 Aligned_cols=84 Identities=19% Similarity=0.286 Sum_probs=48.9
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCcc--CCCCc-------cc--cc-cccccCCCCCchhh
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT--GYGSS-------GW--QA-PEQLLQGRQTRAID 693 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~--~~GT~-------~Y--~A-PE~l~~~~~t~ksD 693 (753)
.++|+|+++.||+++.+..-.+.|.||+.+.......+-...... ..+.. .| .. |+... ......+
T Consensus 192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~--r~~~~~~ 269 (304)
T 3sg8_A 192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLE--KYRMKEK 269 (304)
T ss_dssp EEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHH--HHHHHHH
T ss_pred eeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHH--HHHHHHH
Confidence 589999999999998752235789999998765432111000000 00000 01 11 22111 1123478
Q ss_pred HHHHHHHHHHHHhCCCCCC
Q 004442 694 LFSLGCILFFCITGGKHPY 712 (753)
Q Consensus 694 IwSfGvvL~EllTG~~~Pf 712 (753)
.|+++.++|++.+| .++|
T Consensus 270 ~~~l~~~~~~~~~g-~~~~ 287 (304)
T 3sg8_A 270 YWSFEKIIYGKEYG-YMDW 287 (304)
T ss_dssp HHHHHHHHHHHHTT-CHHH
T ss_pred HHHHHHHHHHHHcC-CHHH
Confidence 99999999999998 4343
No 262
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.90 E-value=1.9e-05 Score=84.16 Aligned_cols=65 Identities=11% Similarity=-0.003 Sum_probs=41.2
Q ss_pred eEEecccCceEEEEEEeeCCcEEEEEEeecCCc-hHHHHHHHHHHHhCCC----CceeeecccccCCceEEEEEccccC
Q 004442 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-DVALKEIQNLIASDQH----PNIVRWYGVESDQDFVYLSLERCTC 551 (753)
Q Consensus 478 ~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~H----pNIV~L~g~~~~~~~~~LV~E~c~~ 551 (753)
.+.++.|....||+. |..+++|+...... ....+|.. ++..+.+ -.+.+.+++ +..++|||++++
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~~~~~~~E~~-~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRDSVRISQKRELE-LYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHH-HHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcHHHHHHHHHHHH-HHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 466899999999986 67788997754332 23334443 5555554 123344444 456899997766
No 263
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.63 E-value=0.00023 Score=75.01 Aligned_cols=71 Identities=13% Similarity=-0.038 Sum_probs=52.0
Q ss_pred EEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc---hHHHHHHHHHHHhCCCC---ceeeecccccCCceEEEEEccc
Q 004442 476 VFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHP---NIVRWYGVESDQDFVYLSLERC 549 (753)
Q Consensus 476 ~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~Hp---NIV~L~g~~~~~~~~~LV~E~c 549 (753)
.-.+.|+.|.++.||+....+|..++||+...... ..+..|.. .++.+.|. .+.+++++. ..++|||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~-~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEAL-GLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHH-HHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHH-HHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 34577999999999999888899999999754322 34455555 66777665 477777763 358999977
Q ss_pred cC
Q 004442 550 TC 551 (753)
Q Consensus 550 ~~ 551 (753)
++
T Consensus 93 ~g 94 (288)
T 3d1u_A 93 DE 94 (288)
T ss_dssp CC
T ss_pred cc
Confidence 65
No 264
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.61 E-value=0.0002 Score=75.76 Aligned_cols=68 Identities=15% Similarity=0.138 Sum_probs=43.3
Q ss_pred EEecccCceEEEEEEeeCCcEEEEEEeecCCc-hHHHHHHHHHHHhCCCC---ceeeeccccc-CCceEEEEEccccC
Q 004442 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHP---NIVRWYGVES-DQDFVYLSLERCTC 551 (753)
Q Consensus 479 ~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~Hp---NIV~L~g~~~-~~~~~~LV~E~c~~ 551 (753)
+.++.|....||+. |..++||+-..... ....+|.. ++..+.+. .+.+.+.++. ..+..++|||++++
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~~~~~~~~~E~~-~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQQGADELNKEIQ-LLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHH-HHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCchHHHHHHHHHH-HHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 45788999999986 57788888533222 23334444 66665542 2456666653 45567899998876
No 265
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.51 E-value=0.00029 Score=72.44 Aligned_cols=70 Identities=10% Similarity=-0.064 Sum_probs=45.2
Q ss_pred ecccCce-EEEEEEee-CCcEEEEEEeecCCchHHHHHHHHHHHhC-CCCceeeecccccCCceEEEEEccccC
Q 004442 481 IAKGSNG-TVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLSLERCTC 551 (753)
Q Consensus 481 IG~G~fG-~Vyka~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l-~HpNIV~L~g~~~~~~~~~LV~E~c~~ 551 (753)
+..|..| .||+.... ++..++||+-.........+|.. .+..+ .+--+.+.++++.+.+..++|||++++
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~-~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMV-RLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHH-HHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHH-HHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 4445444 68876544 46789999876543334444554 33433 233366788888888999999997776
No 266
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.48 E-value=0.00094 Score=71.67 Aligned_cols=163 Identities=15% Similarity=0.173 Sum_probs=101.7
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (753)
..+..++++.||.|+.+|..+|+.+|++..+.++.++-. -.+..+|.- ..+..||.-+...|++. +.....+.+
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~---~~~~~v~v~--~~~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPV---VSDGLVLIH--TSNGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCE---EETTEEEEE--CTTSEEEEEETTTCCEEEEEECCC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCE---EECCEEEEE--cCCCeEEEEECCCCcEEEEEeCCCCce
Confidence 346788899999999999999999999998876643322 122223332 34567888888888876 444322211
Q ss_pred ---HHhCceeecCCeeeeeceeeeEEEEecccccEEecccCCCCCCCCCCCcccCcceeccCCcchhhcccccccccccc
Q 004442 126 ---IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (753)
Q Consensus 126 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (753)
...+|.+. +|.|.+|.....++.+|++||+++.....+... +..+...+..+... |.+. .-
T Consensus 177 ~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~-----~~~~~~~~~~~~~~-----p~~~-----~~ 240 (376)
T 3q7m_A 177 SLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT-----GSTEIDRLSDVDTT-----PVVV-----NG 240 (376)
T ss_dssp --CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC----------------CCCCC-----CEEE-----TT
T ss_pred eecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCC-----CCcccccccccCCC-----cEEE-----CC
Confidence 12567776 677999998889999999999999885443211 11111111111111 1111 23
Q ss_pred ceEEEEeeeeeeecCCCCceEEEEeeec
Q 004442 203 LVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (753)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (753)
.|++.-.+-.+-.+.+++|+.+|.....
T Consensus 241 ~v~~~~~~g~l~~~d~~tG~~~w~~~~~ 268 (376)
T 3q7m_A 241 VVFALAYNGNLTALDLRSGQIMWKRELG 268 (376)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEECCC
T ss_pred EEEEEecCcEEEEEECCCCcEEeeccCC
Confidence 4555545667778888999999987644
No 267
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.21 E-value=0.00073 Score=72.51 Aligned_cols=155 Identities=14% Similarity=0.185 Sum_probs=99.1
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCC----------cccccccCCCCCCceeeeccCCCceeeeeccccCcee
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP----------IYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK 116 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (753)
..+...+++.||+|+.+|..+|+.+|++..+.. +.+. +.-.+..+|.- ..+..||.=+...|++.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~v~--~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG---VTVSGGHVYIG--SEKAQVYALNTSDGTVA 126 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE---EEEETTEEEEE--ETTSEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC---ceEeCCEEEEE--cCCCEEEEEECCCCCEE
Confidence 457788889999999999999999999998543 2111 11112224332 34567888888888876
Q ss_pred -eeccCHHHHHHhCceeecCCeeeeeceeeeEEEEecccccEEecccCCCCCCCCCCCcccCcceeccCCcchhhccccc
Q 004442 117 -KLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVG 195 (753)
Q Consensus 117 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (753)
+.... .-+...|.+. +|.|.+|+....++++|++||+++..+..+...... . . .. .|.+.
T Consensus 127 W~~~~~--~~~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~---~-~-------~~-----~~~~~ 187 (376)
T 3q7m_A 127 WQTKVA--GEALSRPVVS-DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSL---R-G-------ES-----APTTA 187 (376)
T ss_dssp EEEECS--SCCCSCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC--------C-C-------CC-----CCEEE
T ss_pred EEEeCC--CceEcCCEEE-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceee---c-C-------CC-----CcEEE
Confidence 44322 2245567765 667999999999999999999999886553211000 0 0 00 01111
Q ss_pred cccccccceEEEEeeeeeeecCCCCceEEEEeeec
Q 004442 196 NLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (753)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (753)
.-.|++--.+-.+..+.+.+|+.+|.....
T Consensus 188 -----~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~ 217 (376)
T 3q7m_A 188 -----FGAAVVGGDNGRVSAVLMEQGQMIWQQRIS 217 (376)
T ss_dssp -----TTEEEECCTTTEEEEEETTTCCEEEEEECC
T ss_pred -----CCEEEEEcCCCEEEEEECCCCcEEEEEecc
Confidence 123444333556778889999999998765
No 268
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.20 E-value=0.0021 Score=67.91 Aligned_cols=44 Identities=18% Similarity=0.167 Sum_probs=33.1
Q ss_pred HHHHHHHHHhhh-------------CCccccCCCCCcEEEecCCCCeEEEEeccCceec
Q 004442 613 RDIVSGLSHLHE-------------IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (753)
Q Consensus 613 ~qIa~gL~yLH~-------------~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~ 658 (753)
..+..++.+|++ ..++|+|+++.||+++.++. +.|+||+.+...
T Consensus 197 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~--~~lIDfe~a~~g 253 (346)
T 2q83_A 197 EDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQ--IWVIDLDTVSFD 253 (346)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGC--EEECCCTTCEEC
T ss_pred HHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCc--EEEEehhhcccC
Confidence 344556666652 47999999999999965544 889999987643
No 269
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=97.09 E-value=0.00026 Score=84.51 Aligned_cols=63 Identities=14% Similarity=-0.003 Sum_probs=39.3
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCC
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQ 307 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~ 307 (753)
+|+|.+.+..+-.-.....++.+.+.+|+|+|.|| .+.++ .|+.|||++|+|+|.||..+..+
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 55666654433211122344666777788888886 46666 67778888888888887666543
No 270
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.05 E-value=0.001 Score=72.33 Aligned_cols=71 Identities=11% Similarity=0.036 Sum_probs=48.0
Q ss_pred EeEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHhCCCCc--eeeecccccCC-ceEEEEEccccC
Q 004442 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPN--IVRWYGVESDQ-DFVYLSLERCTC 551 (753)
Q Consensus 477 i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpN--IV~L~g~~~~~-~~~~LV~E~c~~ 551 (753)
..+.++.|....+|+... +|..+++|+.... ....+|.. ++..+.... +.++++++.+. +..|+|||++++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~--~~~~~E~~-~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA--DGFYKDRY-VYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC--HHHHHHHH-HHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch--hhHHHHHH-HHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 346689999999998653 6889999987543 23455554 455554333 44566665554 678999998876
No 271
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=96.97 E-value=0.001 Score=71.42 Aligned_cols=74 Identities=5% Similarity=0.029 Sum_probs=46.0
Q ss_pred EeEEe-cccCceEEEEEEee-------CCcEEEEEEeecCC------chHHHHHHHHHHHhCC-C--CceeeecccccCC
Q 004442 477 FNKEI-AKGSNGTVVLEGNY-------EGRSVAVKRLVKTH------HDVALKEIQNLIASDQ-H--PNIVRWYGVESDQ 539 (753)
Q Consensus 477 i~~~I-G~G~fG~Vyka~~~-------~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~-H--pNIV~L~g~~~~~ 539 (753)
..+.| +.|....+|+.... ++..+++|+..... .....+|.. ++..+. + -.+.++++++.+.
T Consensus 24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~-~l~~L~~~~~vpvP~v~~~~~~~ 102 (357)
T 3ats_A 24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFE-VIRLVGELTDVPVPRVRWIETTG 102 (357)
T ss_dssp EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHH-HHHHHHHHCCSCCCCEEEEECSS
T ss_pred EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHH-HHHHHhhcCCCCCCcEEEEccCC
Confidence 44668 88999999986554 26788999865422 123444544 333332 2 2456677776654
Q ss_pred ---ceEEEEEccccC
Q 004442 540 ---DFVYLSLERCTC 551 (753)
Q Consensus 540 ---~~~~LV~E~c~~ 551 (753)
+..++|||++++
T Consensus 103 ~~~g~~~~v~e~l~G 117 (357)
T 3ats_A 103 DVLGTPFFLMDYVEG 117 (357)
T ss_dssp TTTSSCEEEEECCCC
T ss_pred CccCCceEEEEecCC
Confidence 356899997765
No 272
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.96 E-value=0.0078 Score=69.79 Aligned_cols=110 Identities=13% Similarity=0.130 Sum_probs=73.9
Q ss_pred eEEEecCceEEEEeccCCeeeEEecCCCCc--ccccccCCCCCCceeeeccC-----CCceeeeeccccCcee-eeccCH
Q 004442 51 ALVAALDGTIHLVDTKLGKIRWSFGTGRPI--YSSYQASFNSNASEFYLDVD-----EDWELYFHSKRFGKMK-KLSSSA 122 (753)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~ 122 (753)
.+|++.||.|+.+|..+|+.+|++..+.+- |..+.+|.-.+-.+ |+-.. -+..||--+...|++. ++....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V-~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKV-IIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEE-EECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEE-EEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 788999999999999999999999877632 22222332222223 33332 3678888888899887 555443
Q ss_pred HHHHH------------------------------------hCcee-ecCCeeeeecee----------------eeEEE
Q 004442 123 EEYIR------------------------------------RMPYI-SKDGGVTLGAMK----------------TSVFL 149 (753)
Q Consensus 123 ~~~~~------------------------------------~~~~~-~~~~~~~~~~~~----------------~~~~~ 149 (753)
++.-. ..|.+ .++|.|++|.-. .++++
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 33110 01222 267889998764 48999
Q ss_pred EecccccEEecc
Q 004442 150 VDVKSGRVVDNY 161 (753)
Q Consensus 150 ~~~~~~~~~~~~ 161 (753)
+|++||+++-.+
T Consensus 283 ld~~TG~~~W~~ 294 (599)
T 1w6s_A 283 RDADTGEAKFGY 294 (599)
T ss_dssp EETTTCCEEEEE
T ss_pred EeCCCCceeeEe
Confidence 999999998764
No 273
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=96.84 E-value=0.0024 Score=69.69 Aligned_cols=71 Identities=20% Similarity=0.210 Sum_probs=42.1
Q ss_pred eEEecccCceEEEEEEee-CCcEEEEEEeecCC----------chHHHHHHHHHHHhCC-C-C-ceeeecccccCCceEE
Q 004442 478 NKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH----------HDVALKEIQNLIASDQ-H-P-NIVRWYGVESDQDFVY 543 (753)
Q Consensus 478 ~~~IG~G~fG~Vyka~~~-~g~~VAVK~l~~~~----------~~~~~~Ei~~ll~~l~-H-p-NIV~L~g~~~~~~~~~ 543 (753)
.+.||.|..+.||++... +++.++||...... .+....|.. ++..+. + + .+.+++.+. .+..+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~-~L~~l~~~~~~~vP~~~~~d--~~~~~ 111 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESS-ALIRQGEHVPHLVPRVFYSD--TEMAV 111 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHH-HHHHHHTTCGGGSCCEEEEE--TTTTE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHH-HHHHhhhhCCCCcCeEEEEc--CCccE
Confidence 467999999999998654 47899999764321 122344544 444332 1 3 334555443 34458
Q ss_pred EEEccccC
Q 004442 544 LSLERCTC 551 (753)
Q Consensus 544 LV~E~c~~ 551 (753)
+|||++.+
T Consensus 112 lvmE~l~g 119 (397)
T 2olc_A 112 TVMEDLSH 119 (397)
T ss_dssp EEECCCTT
T ss_pred EEEEeCCC
Confidence 99998875
No 274
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.80 E-value=0.0012 Score=71.69 Aligned_cols=149 Identities=17% Similarity=0.116 Sum_probs=74.8
Q ss_pred eeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCC-CCCceeeeccCCCceeeeeccccCcee-eeccCHHHHHH
Q 004442 50 VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFN-SNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYIR 127 (753)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 127 (753)
+.++++.||+|+++|..+|+.+|++....|- ..+.+|.- .+..+ | -+..|..+|.-+...|++. ++. ....++
T Consensus 51 ~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~-~~~~sp~~~~~~~v-~-~g~~dg~v~a~D~~tG~~~w~~~--~~~~~~ 125 (369)
T 2hz6_A 51 AFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE-LVQASPCRSSDGIL-Y-MGKKQDIWYVIDLLTGEKQQTLS--SAFADS 125 (369)
T ss_dssp CEEECTTTCCEEEC-----CCSEECSCCHHH-HHTTCSCC-----C-C-CCEEEEEEEEECCC-----------------
T ss_pred EEEEeCCCCEEEEEECCCCceeeeeeccCcc-ccccCceEecCCEE-E-EEeCCCEEEEEECCCCcEEEEec--CCCccc
Confidence 3344479999999999999999987643221 00112221 22223 2 2456778888888888875 322 223345
Q ss_pred hCceeecCCeeeeeceeeeEEEEecccccEEecccCCCCCCCCCCCcccCcceeccCCcchhhccccccccccccceEEE
Q 004442 128 RMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIM 207 (753)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (753)
.+| +++.|++|+...+++++|++||+++-.......+++.-+++ ......|++.
T Consensus 126 ~~p---~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~-----------------------~~~~~~v~~~ 179 (369)
T 2hz6_A 126 LSP---STSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPEDD-----------------------VDYKMSHFVS 179 (369)
T ss_dssp ----------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCCC-----------------------TTCCCCEEEE
T ss_pred ccc---cCCEEEEEecCCEEEEEECCCCCEEEeEecccccCccccCC-----------------------ccccceEEEE
Confidence 566 78889999999999999999999887643321122211110 0011234444
Q ss_pred EeeeeeeecCCCCceEEEEeee
Q 004442 208 RTDYVLQSTSQDSGEVLWNVAY 229 (753)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~ 229 (753)
-.|=.+.-+.+++|+++|....
T Consensus 180 ~~dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 180 NGDGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp ETSCEEEEECTTTCCEEEEEEC
T ss_pred CCCCEEEEEECCCCcEEEEecC
Confidence 4455677888889999998763
No 275
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.80 E-value=0.0099 Score=68.48 Aligned_cols=114 Identities=16% Similarity=0.195 Sum_probs=75.4
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCc--ccccccCCCCCCceeeeccCC-----CceeeeeccccCcee-ee
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPI--YSSYQASFNSNASEFYLDVDE-----DWELYFHSKRFGKMK-KL 118 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~ 118 (753)
..+...|++.||+|+.+|..+|+.+|++..+.+- +....+|.-.+-.+ |+-+.. +..||.-+...|++. ++
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v-~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTV-LMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEE-EEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEE-EEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 3567788899999999999999999999887632 11222222222234 444332 788999999999987 55
Q ss_pred ccCHHHHHH-------------------------------------hCceee-cCCeeeeecee----------------
Q 004442 119 SSSAEEYIR-------------------------------------RMPYIS-KDGGVTLGAMK---------------- 144 (753)
Q Consensus 119 ~~~~~~~~~-------------------------------------~~~~~~-~~~~~~~~~~~---------------- 144 (753)
....+. .. ..+.+. ++|.|++|...
T Consensus 193 ~~~~~~-~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 193 FATGSD-DSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp ESSSCH-HHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred ccCCCc-cccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence 533222 10 012222 35788888742
Q ss_pred eeEEEEecccccEEeccc
Q 004442 145 TSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~ 162 (753)
.+++++|++||+++-.+.
T Consensus 272 ~~v~Ald~~tG~~~W~~~ 289 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQ 289 (571)
T ss_dssp TEEEEEETTTCCEEEEEE
T ss_pred EEEEEEecCCCcEEEEec
Confidence 379999999999998753
No 276
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.77 E-value=0.0078 Score=70.81 Aligned_cols=116 Identities=16% Similarity=0.080 Sum_probs=74.7
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCC-CCc--ccccccCCCCCCceeeeccC----CCceeeeeccccCcee-ee
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTG-RPI--YSSYQASFNSNASEFYLDVD----EDWELYFHSKRFGKMK-KL 118 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~ 118 (753)
..+..+|++.||+|+.+|..+|+.+|+|..+ .+- +....+|.-.+..+|.-... .+..||.-+...|++. ++
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 4577888899999999999999999999987 221 11122222222234332221 2677888888888876 44
Q ss_pred ccCH----------------------HHHHHh--------Cceee-cCCeeeeeceee-------------------eEE
Q 004442 119 SSSA----------------------EEYIRR--------MPYIS-KDGGVTLGAMKT-------------------SVF 148 (753)
Q Consensus 119 ~~~~----------------------~~~~~~--------~~~~~-~~~~~~~~~~~~-------------------~~~ 148 (753)
.... .+..+. .|.+. +.|.|++|.... +++
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 3221 122221 23333 467888887653 699
Q ss_pred EEecccccEEeccc
Q 004442 149 LVDVKSGRVVDNYV 162 (753)
Q Consensus 149 ~~~~~~~~~~~~~~ 162 (753)
++|++||+++-.+.
T Consensus 287 AlD~~TG~~~W~~~ 300 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQ 300 (677)
T ss_dssp EECTTTCCEEEEEE
T ss_pred EEECCCCCEEEEEe
Confidence 99999999998753
No 277
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.63 E-value=0.004 Score=68.71 Aligned_cols=80 Identities=14% Similarity=0.034 Sum_probs=47.8
Q ss_pred hhCCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccccccccccCC---CCCchhhHHHHHH
Q 004442 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQG---RQTRAIDLFSLGC 699 (753)
Q Consensus 623 H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~t~ksDIwSfGv 699 (753)
+...++|+|+++.||+++.++ ++|.||+.+.......+-...... -...|++|+..... ......++.....
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~---~~lID~e~a~~G~p~~Dla~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS---TQVIDPEFSFYGPMGFDIGAYLGN--LILAFFAQDGHATQENDRKEYKQWILRTIE 304 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC---EEECCCTTCEEECHHHHHHHHHHH--HHHHHHHGGGGCCSSCCSHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCcEEEeCCC---CEEEeCcccccCchHHHHHHHHHH--HHHHHHhcccccccccchHHHHHHHHHHHH
Confidence 456799999999999997654 789999998765321110000000 02346666654311 1123455667777
Q ss_pred HHHHHHhC
Q 004442 700 ILFFCITG 707 (753)
Q Consensus 700 vL~EllTG 707 (753)
.+|+.+++
T Consensus 305 ~~~~~y~~ 312 (420)
T 2pyw_A 305 QTWNLFNK 312 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
No 278
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.52 E-value=0.018 Score=59.66 Aligned_cols=156 Identities=10% Similarity=0.154 Sum_probs=88.7
Q ss_pred CCCeeE-EEecCceEEEEeccCCeeeEEecCCCC--cccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCH
Q 004442 47 EPDVAL-VAALDGTIHLVDTKLGKIRWSFGTGRP--IYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSA 122 (753)
Q Consensus 47 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 122 (753)
.||-.| ++.-||+|+++|.++|+++|+|..+.+ .++.+..+ +.+ +++ . .+-.+|.-++ .|++. ++...
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~--ilv-s--~~~~V~~~d~-~G~~~W~~~~~- 74 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGE--ILF-S--YSKGAKMITR-DGRELWNIAAP- 74 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSC--EEE-E--CBSEEEEECT-TSCEEEEEECC-
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCC--EEE-e--CCCCEEEECC-CCCEEEEEcCC-
Confidence 344344 445699999999999999999999762 34444433 322 333 2 2445666666 67665 44321
Q ss_pred HHHHHhCceeecCCeeeeece--eeeEEEEecccccEEecccCCCCCCCCCCCcccCcceeccCCcchhhcccccccccc
Q 004442 123 EEYIRRMPYISKDGGVTLGAM--KTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRI 200 (753)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (753)
...--...-+..||.+.++.. ...+++||+ +|+++.....+..... .......+...++-
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~---~~~~~~~v~~~~~G-------------- 136 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIER---PHAQFRQINKNKKG-------------- 136 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSS---GGGSCSCCEECTTS--------------
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCc---ccccccCceECCCC--------------
Confidence 000011234567887777643 578999997 8999988655321100 00000111111111
Q ss_pred ccceEEEEeeeeeeecCCCCceEEEEeeec
Q 004442 201 RQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (753)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (753)
..|.....+..++-+.++ |+.+|.....
T Consensus 137 -~~lv~~~~~~~v~~~d~~-G~~~w~~~~~ 164 (276)
T 3no2_A 137 -NYLVPLFATSEVREIAPN-GQLLNSVKLS 164 (276)
T ss_dssp -CEEEEETTTTEEEEECTT-SCEEEEEECS
T ss_pred -CEEEEecCCCEEEEECCC-CCEEEEEECC
Confidence 122222235668888898 9999998763
No 279
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=96.33 E-value=0.0033 Score=75.82 Aligned_cols=55 Identities=7% Similarity=-0.252 Sum_probs=32.1
Q ss_pred ccccccccCCccccccccccCCCcccceeecCccccccCCCCCCCCCC--cCCCCCC
Q 004442 263 DVESHLPCHTQMTASVYRLRDNSLPEFLSVIGKVAGWISLPGSSQNSL--LGPVDRN 317 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l~L~~LnlsnN~fsG~IP~~l~s~n~l--~G~~~~~ 317 (753)
.|+.+.+.+|++++-.+..-...|+.|||++|+++|.+|..+.++..+ .||.+.+
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFIC 561 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCC
T ss_pred hhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccc
Confidence 345666667777664432222357777777777777777666544332 2666553
No 280
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=96.25 E-value=0.0024 Score=76.14 Aligned_cols=59 Identities=7% Similarity=-0.032 Sum_probs=47.0
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCC
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLP 303 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~ 303 (753)
+++|.+.+..+-.-.....|+.+.+.+|+|+|.|| .+..+ .|+.|||++|+|+|.||..
T Consensus 663 Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 663 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred CcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 77787775554332233456889999999999998 57888 7999999999999999964
No 281
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.23 E-value=0.01 Score=68.30 Aligned_cols=60 Identities=17% Similarity=0.067 Sum_probs=44.8
Q ss_pred CceeeeeccccCcee-eeccCHHHHHHhCceeecCCeeeeeceeeeEEEEecccccEEecccC
Q 004442 102 DWELYFHSKRFGKMK-KLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (753)
Q Consensus 102 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (753)
+..||.=+...|++. ++.. +.-+.-.|++..+|.|.+|+....++++|++||+++..+..
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWE--KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEecC--CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 456777777777765 3331 11233467888899999999999999999999999988654
No 282
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.10 E-value=0.031 Score=57.98 Aligned_cols=74 Identities=15% Similarity=-0.041 Sum_probs=46.8
Q ss_pred ceEEEeEEecccCceEEEEEEeeCCcEEEEEEeecCCc--hHH-HHHHHHHHHhCC-CC--ceeeecccccCCceEEEEE
Q 004442 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVA-LKEIQNLIASDQ-HP--NIVRWYGVESDQDFVYLSL 546 (753)
Q Consensus 473 ~~~~i~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~--~~~-~~Ei~~ll~~l~-Hp--NIV~L~g~~~~~~~~~LV~ 546 (753)
..+.-.+.+|.|..+.||+....+|+.|.||+-..... ... ..|.. .++.+. .. -+.+.+++. .-++||
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~-~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEAL-GLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHH-HHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHH-HHHHHHhhCCCCcceEEecc----CceEEE
Confidence 34455678999999999999999999999998654321 223 34544 444332 21 233444442 237889
Q ss_pred ccccC
Q 004442 547 ERCTC 551 (753)
Q Consensus 547 E~c~~ 551 (753)
|++..
T Consensus 90 e~l~~ 94 (288)
T 3f7w_A 90 EWVDE 94 (288)
T ss_dssp ECCCC
T ss_pred Eeecc
Confidence 97664
No 283
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.09 E-value=0.034 Score=65.46 Aligned_cols=115 Identities=18% Similarity=0.160 Sum_probs=73.3
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCC-CCc--ccccccCCCCCCceeeeccC-----CCceeeeeccccCcee-e
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTG-RPI--YSSYQASFNSNASEFYLDVD-----EDWELYFHSKRFGKMK-K 117 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~ 117 (753)
..+...|++.||+|+.+|..+|+.+|++..+ .+- +....+|.-.+-.+| +-.. .+..||.-+...|++. +
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~-vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVV-IGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEE-ECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEE-EEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 3567788999999999999999999999986 322 111112211122233 3222 3677888888888876 4
Q ss_pred eccCH---------HHHHH--------------------hCceee-cCCeeeeeceee-------------------eEE
Q 004442 118 LSSSA---------EEYIR--------------------RMPYIS-KDGGVTLGAMKT-------------------SVF 148 (753)
Q Consensus 118 ~~~~~---------~~~~~--------------------~~~~~~-~~~~~~~~~~~~-------------------~~~ 148 (753)
+.... +.+.. ..+.++ +.|.|++|+..- +++
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 43111 11110 123333 468899998764 499
Q ss_pred EEecccccEEeccc
Q 004442 149 LVDVKSGRVVDNYV 162 (753)
Q Consensus 149 ~~~~~~~~~~~~~~ 162 (753)
++|++||+++-.+.
T Consensus 279 AlD~~TG~~~W~~~ 292 (689)
T 1yiq_A 279 AVNADTGEYVWHYQ 292 (689)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEEccCCceeEeee
Confidence 99999999998753
No 284
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=95.91 E-value=0.0099 Score=63.20 Aligned_cols=72 Identities=21% Similarity=0.215 Sum_probs=51.0
Q ss_pred eEEecccCceEEEEEEeeCCcEEEEEEeecCCchHHHHHHHHHHHhC---CCCceeeecccccCCceEEEEEccccC
Q 004442 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASD---QHPNIVRWYGVESDQDFVYLSLERCTC 551 (753)
Q Consensus 478 ~~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l---~HpNIV~L~g~~~~~~~~~LV~E~c~~ 551 (753)
.+.|+.|....+|+... ++..++||+........+..|.. .++.+ ....+.+.++++...+..++|||++++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~~~~~~~E~~-~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSYRSMFRAEAD-QLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGGHHHHHHHHH-HHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcccHHHHHHHHH-HHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 46789999999998765 57788999876543333444444 33333 235677888888777889999998876
No 285
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.91 E-value=0.014 Score=68.57 Aligned_cols=113 Identities=16% Similarity=0.168 Sum_probs=78.5
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCccccc--------ccCCCCCCceeeeccCCCceeeeeccccCcee-e
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSY--------QASFNSNASEFYLDVDEDWELYFHSKRFGKMK-K 117 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 117 (753)
.-++..|++.+|+||.+|..+|+.+|++..+.+..... ..++-.+..+|.- ..|..||.-+...|++. +
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~--~~dg~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVG--AWDGRLIALDAATGKEVWH 153 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEE--CTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEE--cCCCEEEEEECCCCCEEee
Confidence 34667788999999999999999999999887652211 1111122234443 34678888888889887 4
Q ss_pred eccCHH----HHHHhCceeecCCeeeeece------eeeEEEEecccccEEeccc
Q 004442 118 LSSSAE----EYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 118 ~~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 162 (753)
+..... ..+.-+|.+. +|.|++|+. ...++++|++||+++-...
T Consensus 154 ~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 154 QNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 442201 1345577776 566999875 5789999999999997743
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.80 E-value=0.031 Score=64.46 Aligned_cols=60 Identities=15% Similarity=-0.020 Sum_probs=42.2
Q ss_pred CceeeeeccccCcee-eeccCHHHHHHhCceeecCCeeeeeceeeeEEEEecccccEEecccC
Q 004442 102 DWELYFHSKRFGKMK-KLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (753)
Q Consensus 102 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (753)
+.+||-=+...|++. ++... .-+--.|++..+|.|.+|+..-.+.++|++||+++-.+..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 345555555666665 33211 1122357788899999999999999999999999998655
No 287
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.79 E-value=0.0064 Score=65.41 Aligned_cols=113 Identities=16% Similarity=0.097 Sum_probs=72.1
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcc--c-ccc-cCCCCC-----C-ceeeeccCCCceeeeeccccCcee
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIY--S-SYQ-ASFNSN-----A-SEFYLDVDEDWELYFHSKRFGKMK 116 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~-~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~ 116 (753)
..++..+++.||++|.+|..+|+++|+|++|.|.- + ... .+...| . ..-|+. ..+..++++++ .|.+-
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig-~~~y~v~~~~~-sG~~W 187 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIG-KTIFELGIHSY-DGASY 187 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEE-EEEEECEECCT-TSCCC
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEe-cceEEEEEECC-CCCeE
Confidence 67888999999999999999999999999997741 1 111 122111 1 123332 45567788884 46421
Q ss_pred ee------ccCHHHHHHhCceeecCCeeeeeceeeeEEEEecccccEEe-cc
Q 004442 117 KL------SSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVD-NY 161 (753)
Q Consensus 117 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 161 (753)
.+ +..+..-+...+-.+.||.++.|+....++++|+++|+.+- ..
T Consensus 188 ~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W~~~ 239 (339)
T 2be1_A 188 NVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARWVSP 239 (339)
T ss_dssp CCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEEECC
T ss_pred EEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEEEee
Confidence 11 00111112223444667888999999999999999999987 54
No 288
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.72 E-value=0.059 Score=63.17 Aligned_cols=115 Identities=20% Similarity=0.194 Sum_probs=73.1
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCc--ccccccCCCCCCceeeeccC-----CCceeeeeccccCcee-ee
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPI--YSSYQASFNSNASEFYLDVD-----EDWELYFHSKRFGKMK-KL 118 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~ 118 (753)
..+..+|++.||+|+.+|..+|+.+|++..+.+- +....+|.-.+-.+ |+-+. .+..||.-+...|++. ++
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v-~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKV-IIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEE-EECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEE-EEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 3567788999999999999999999999986442 11111121112223 33322 2567888888888876 44
Q ss_pred ccC---------HHHHHHh--------------------Cceee-cCCeeeeeceee-------------------eEEE
Q 004442 119 SSS---------AEEYIRR--------------------MPYIS-KDGGVTLGAMKT-------------------SVFL 149 (753)
Q Consensus 119 ~~~---------~~~~~~~--------------------~~~~~-~~~~~~~~~~~~-------------------~~~~ 149 (753)
... .+.++.- .|.+. +.|.|++|+... ++++
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 321 1111111 13333 458899998654 5999
Q ss_pred EecccccEEeccc
Q 004442 150 VDVKSGRVVDNYV 162 (753)
Q Consensus 150 ~~~~~~~~~~~~~ 162 (753)
+|++||+++-.+.
T Consensus 275 lD~~tG~~~W~~~ 287 (668)
T 1kv9_A 275 IRPDTGKLAWHYQ 287 (668)
T ss_dssp ECTTTCCEEEEEE
T ss_pred EcCCCCceeeEee
Confidence 9999999998754
No 289
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.70 E-value=0.029 Score=59.05 Aligned_cols=174 Identities=13% Similarity=0.130 Sum_probs=80.5
Q ss_pred EEecccCceEEEEEEeeCCcEEEEEEeecC-CchHHHHHHHHHHHhCCC--Cceeeeccc-----ccCCceEEEEEcccc
Q 004442 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKT-HHDVALKEIQNLIASDQH--PNIVRWYGV-----ESDQDFVYLSLERCT 550 (753)
Q Consensus 479 ~~IG~G~fG~Vyka~~~~g~~VAVK~l~~~-~~~~~~~Ei~~ll~~l~H--pNIV~L~g~-----~~~~~~~~LV~E~c~ 550 (753)
..++ |....||+....+|+.+++|..... .....+.++..++..+.. -.+.+.+.. ....+..+++||+++
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 3466 7788999877667878999998643 222233323233333321 124444443 112456688999887
Q ss_pred CC-hh---hHHHHhcCChHHHhhhhhcccchhhhhhhhcccccccchhhhhhhc-CCCCH---HHHHHHHHHHHHHHHHh
Q 004442 551 CS-LN---DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKA-NGHPS---AQLLKVTRDIVSGLSHL 622 (753)
Q Consensus 551 ~~-L~---~liy~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~---~~~l~Ia~qIa~gL~yL 622 (753)
+. +. .-.+..-|..--.+|...................... ....+.. ..++. ......+..++..+.-+
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIE--PRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHH--HHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhh--HHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 62 21 0011122222223343221110000000000000000 0000111 11221 11223333333333322
Q ss_pred ----hhCCccccCCCCCcEEEecCCCCeEEEEeccCceecc
Q 004442 623 ----HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (753)
Q Consensus 623 ----H~~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~ 659 (753)
+...++|+|+++.||+++ + .+.|.||+.+....
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~---~~~lIDfe~a~~g~ 225 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D---GPMFVDLDDARNGP 225 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S---SEEECCCTTCCEEC
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C---CCEEEECCCCCcCc
Confidence 234589999999999996 3 48899999876543
No 290
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.63 E-value=0.018 Score=67.76 Aligned_cols=113 Identities=14% Similarity=0.164 Sum_probs=77.5
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccc--------cCCCCCCceeeeccCCCceeeeeccccCcee-e
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQ--------ASFNSNASEFYLDVDEDWELYFHSKRFGKMK-K 117 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 117 (753)
..++..|++.||+||.+|..+|+.+|++..+.+....+. +++-.+..+|.- ..|..||.-+...|++. +
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~--~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVG--VLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEE--CTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEE--ccCCEEEEEECCCCCEeee
Confidence 467788899999999999999999999998776422111 111112224432 24677888888888887 4
Q ss_pred eccCHH----HHHHhCceeecCCeeeeece------eeeEEEEecccccEEeccc
Q 004442 118 LSSSAE----EYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 118 ~~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 162 (753)
+..... ..+.-+|.+. +|.|++|.. .-.++++|++||+++-.+.
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ecCcCCCCCCccccCCcEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 443201 1344578775 566999874 5789999999999997743
No 291
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.46 E-value=0.024 Score=66.52 Aligned_cols=113 Identities=16% Similarity=0.146 Sum_probs=78.7
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCccccccc--------CCCCCCceeeeccCCCceeeeeccccCcee-e
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQA--------SFNSNASEFYLDVDEDWELYFHSKRFGKMK-K 117 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 117 (753)
..++..|++.+|+||.+|..+|+.+|++..+.+....... ++-.+..+|.- ..|..||.-+...|++. +
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~--~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVG--TLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEE--CTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEE--cCCCEEEEEECCCCCEeee
Confidence 4577888999999999999999999999988775332211 01111224433 24678888888889887 4
Q ss_pred eccCHH---HHHHhCceeecCCeeeeece------eeeEEEEecccccEEeccc
Q 004442 118 LSSSAE---EYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 118 ~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 162 (753)
+...-. ..+.-+|.+. +|.|++|.. ...++++|++||+++-.+.
T Consensus 143 ~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EECSCTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred eccCCCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 443111 1244578775 566999875 4789999999999998753
No 292
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.23 E-value=0.039 Score=63.65 Aligned_cols=112 Identities=21% Similarity=0.211 Sum_probs=77.4
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecCCCCccccc------ccCCCCCCceeeeccCCCceeeeeccccCcee-eecc
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSY------QASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSS 120 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 120 (753)
.++..|++.++.||.+|..+|+.+|++..+.|..+.. ..++-.+..+|.-. .|..||.-+...|++. +...
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t--~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT--LDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE--TTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe--CCCEEEEEECCCCCEEeeecC
Confidence 4566777775669999999999999999987753220 01111122354432 4678888888899887 4443
Q ss_pred CHHH---HHHhCceeecC---C--eeeeece------eeeEEEEecccccEEecc
Q 004442 121 SAEE---YIRRMPYISKD---G--GVTLGAM------KTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 121 ~~~~---~~~~~~~~~~~---~--~~~~~~~------~~~~~~~~~~~~~~~~~~ 161 (753)
.-.+ .+..+|.+.++ | .|++|+. ...++++|++||+++-..
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 3211 24568998766 2 6889874 678999999999999874
No 293
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=95.14 E-value=0.059 Score=56.20 Aligned_cols=31 Identities=19% Similarity=0.038 Sum_probs=24.9
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceecc
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~ 659 (753)
.++|+|+.+.||+. .++. +.|+||..+....
T Consensus 174 ~l~HgDl~~~Nil~-~~~~--~~lID~e~a~~g~ 204 (301)
T 3dxq_A 174 AACHCDPLCENFLD-TGER--MWIVDWEYSGMND 204 (301)
T ss_dssp EEECSCCCGGGEEE-CSSC--EEECCCTTCEEEC
T ss_pred eeeccCCCcCCEEE-CCCC--EEEEecccccCCC
Confidence 58999999999994 4444 7899999887543
No 294
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.14 E-value=0.051 Score=62.91 Aligned_cols=113 Identities=14% Similarity=0.130 Sum_probs=77.4
Q ss_pred CCeeEEEec-CceEEEEec-cCCeeeEEecCCCCccccc--------ccCCC--CCCc----eeeeccCCCceeeeeccc
Q 004442 48 PDVALVAAL-DGTIHLVDT-KLGKIRWSFGTGRPIYSSY--------QASFN--SNAS----EFYLDVDEDWELYFHSKR 111 (753)
Q Consensus 48 ~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~----~~~~~~~~~~~~~~~~~~ 111 (753)
-++..|++. +|.||.+|. .+|+.+|++..+.+....- -.++- .+.. ||.- ..|..||-=+..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~--t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKT--QLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEE--CTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEE--cCCCEEEEEECC
Confidence 456677788 899999999 9999999999887642210 00111 1222 5443 246788888888
Q ss_pred cCcee-eeccCH---HHHHHhCceeecCCeeeeece------eeeEEEEecccccEEecccC
Q 004442 112 FGKMK-KLSSSA---EEYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVL 163 (753)
Q Consensus 112 ~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 163 (753)
.|++. +....- ...+.-+|.|. +|.|++|+. ...++++|++||+++-.++.
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 89887 433221 11345678886 567999984 67899999999999977544
No 295
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.13 E-value=0.088 Score=55.64 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=28.0
Q ss_pred CCccccCCCCCcEEEecCC--CCeEEEEeccCceeccC
Q 004442 625 IGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQG 660 (753)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~--~~~~KLsDFGla~~~~~ 660 (753)
..++|+|+.+.||+++.+. .-.+.|.||+.+.....
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~ 220 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR 220 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence 4799999999999997641 12478999999876543
No 296
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.04 E-value=0.047 Score=60.47 Aligned_cols=69 Identities=14% Similarity=0.090 Sum_probs=43.5
Q ss_pred eEEecccCceEEEEEEeeC--------CcEEEEEEeecCCc-hHHHHHHHHHHHhCCCCce-eeecccccCCceEEEEEc
Q 004442 478 NKEIAKGSNGTVVLEGNYE--------GRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNI-VRWYGVESDQDFVYLSLE 547 (753)
Q Consensus 478 ~~~IG~G~fG~Vyka~~~~--------g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNI-V~L~g~~~~~~~~~LV~E 547 (753)
.+.|+.|-...||+....+ +..+++|+...... .....|.. ++..+...++ .++++.+.+ .+|+|
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~-~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESV-IFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHH-HHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHH-HHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 3568888889999986653 57899998854333 45556655 3343322233 466666543 28999
Q ss_pred cccC
Q 004442 548 RCTC 551 (753)
Q Consensus 548 ~c~~ 551 (753)
++++
T Consensus 153 ~l~G 156 (429)
T 1nw1_A 153 YIPS 156 (429)
T ss_dssp CCCE
T ss_pred EeCC
Confidence 8765
No 297
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=94.97 E-value=0.028 Score=54.65 Aligned_cols=48 Identities=8% Similarity=-0.018 Sum_probs=28.0
Q ss_pred ccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCC
Q 004442 263 DVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSL 310 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l 310 (753)
.|+.+.+.+|++++..+. +.++ .|+.|+|++|+++|.+|..+..+..|
T Consensus 79 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 128 (192)
T 1w8a_A 79 HIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSL 128 (192)
T ss_dssp TCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTC
T ss_pred cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCC
Confidence 345566666666665543 5555 56666666666666666555544443
No 298
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=94.95 E-value=0.067 Score=56.05 Aligned_cols=31 Identities=32% Similarity=0.382 Sum_probs=25.1
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceec
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~ 658 (753)
+++|+|+.+.||+++.++ .+.|.||+.+...
T Consensus 188 ~liHgDl~~~Nil~~~~~--~~~lIDf~~a~~g 218 (322)
T 2ppq_A 188 GVIHADLFQDNVFFLGDE--LSGLIDFYFACND 218 (322)
T ss_dssp EEECSCCCGGGEEEETTE--EEEECCCTTCEEE
T ss_pred ccCCCCCCccCEEEeCCc--eEEEecchhccCc
Confidence 699999999999997653 2479999987643
No 299
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.67 E-value=0.047 Score=56.44 Aligned_cols=110 Identities=11% Similarity=0.116 Sum_probs=69.6
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eecc-CHH
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSS-SAE 123 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 123 (753)
+.-++..+...||+|+.+|.. |+.+|+|..+.+.|++-. .++.+ + ++-+.++-.+|.-++..|++. ++.- .++
T Consensus 134 ~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~-~~~g~--~-~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~ 208 (276)
T 3no2_A 134 KKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAF-LDNGD--C-LVACGDAHCFVQLNLESNRIVRRVNANDIE 208 (276)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEE-CTTSC--E-EEECBTTSEEEEECTTTCCEEEEEEGGGSB
T ss_pred CCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeE-cCCCC--E-EEEeCCCCeEEEEeCcCCcEEEEecCCCCC
Confidence 344555555679999999988 999999998755555432 22222 3 333444456888888878876 4431 111
Q ss_pred H--HHH-hCceeecCCeeeeece-----------eeeEEEEecccccEEecc
Q 004442 124 E--YIR-RMPYISKDGGVTLGAM-----------KTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 124 ~--~~~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 161 (753)
. +.. ....+..+|.+++++- .-.+|+||+ +|+++-.|
T Consensus 209 ~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~-~g~~~W~~ 259 (276)
T 3no2_A 209 GVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS-EGKVVWQL 259 (276)
T ss_dssp SCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT-TSBEEEEE
T ss_pred CccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC-CCCEEEEe
Confidence 1 100 1122347898999873 335999997 99999774
No 300
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.63 E-value=0.059 Score=55.66 Aligned_cols=144 Identities=15% Similarity=0.257 Sum_probs=86.8
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcc-cccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIY-SSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 124 (753)
..+...+++.||.|+.+| .+|+.+|.+..+.++. +.+... + ...|+-..+ ||.-++ .|+.. .+ ..++
T Consensus 29 ~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~---~-g~l~v~t~~---l~~~d~-~g~~~~~~--~~~~ 97 (330)
T 3hxj_A 29 KNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGK---D-GTIYFGSDK---VYAINP-DGTEKWRF--DTKK 97 (330)
T ss_dssp TTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETT---T-TEECCSSCE---EEEECC-CGGGGGGS--CC--
T ss_pred cCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEec---C-CcEEEecCc---EEEECC-CCcEEEEE--ECCC
Confidence 456777888899999999 9999999998765542 222211 1 122333222 666554 45443 22 2333
Q ss_pred HHHhCceeecCCeeeeeceeeeEEEEecccccEEecccCCCCCCCCCCCcccCcceeccCCcchhhccccccccccccce
Q 004442 125 YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLV 204 (753)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (753)
-+...|.+. +|.|.+|+....++.+|++ |+.+..+..+... ...++ + ..+-.|
T Consensus 98 ~~~~~~~~~-~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~---------~~~~~--------~--------~~~g~l 150 (330)
T 3hxj_A 98 AIVSDFTIF-EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAI---------YATPI--------V--------SEDGTI 150 (330)
T ss_dssp ---CCEEEE-TTEEEEECTTSEEEEECTT-SCEEEEEECSSCC---------CSCCE--------E--------CTTSCE
T ss_pred CcccCceEE-CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCce---------eeeeE--------E--------cCCCEE
Confidence 445677776 8889999988899999999 9988775432110 00010 0 011234
Q ss_pred EEEEeeeeeeecCCCCceEEEEeee
Q 004442 205 YIMRTDYVLQSTSQDSGEVLWNVAY 229 (753)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (753)
.|--.+-.|..|.++ |..+|....
T Consensus 151 ~vgt~~~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 151 YVGSNDNYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp EEECTTSEEEEECTT-SCEEEEEEC
T ss_pred EEEcCCCEEEEECCC-CCEeEEEec
Confidence 444334677888888 999998763
No 301
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.34 E-value=0.11 Score=53.51 Aligned_cols=104 Identities=25% Similarity=0.464 Sum_probs=71.6
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHHH
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYI 126 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 126 (753)
.+...|++.+|.|+.+|.. |+.+|.+..+.++.++-.... +-.++. +..+..||.-++. |++. .+.. +.-.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~--~g~l~v--gt~~~~l~~~d~~-g~~~~~~~~--~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE--DGTIYV--GSNDNYLYAINPD-GTEKWRFKT--NDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT--TSCEEE--ECTTSEEEEECTT-SCEEEEEEC--SSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC--CCEEEE--EcCCCEEEEECCC-CCEeEEEec--CCCc
Confidence 4667888899999999998 999999998776533221111 112332 3345667776666 7664 3332 2224
Q ss_pred HhCceeecCCeeeeeceeeeEEEEecccccEEeccc
Q 004442 127 RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (753)
-.+|++..+|.|.+|. ..++.+| .+|+.+..+.
T Consensus 179 ~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~ 211 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFY 211 (330)
T ss_dssp CSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEEC
T ss_pred eeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEc
Confidence 4578888899999999 8899999 8998887754
No 302
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.26 E-value=0.35 Score=48.50 Aligned_cols=114 Identities=15% Similarity=0.073 Sum_probs=72.3
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhh-CCccccCCCCCcEEEecCCCCeEEEEeccCceeccCCCcccccCccCCCCccc
Q 004442 599 KANGHPSAQLLKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGW 677 (753)
Q Consensus 599 ~~~~l~~~~~l~Ia~qIa~gL~yLH~-~~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~~~~~~~~~~~~~~GT~~Y 677 (753)
...++.+.++|-++.|.+.+|.-+-. ..-..+=+.|..|+|..||+ +...+ +.+. .....+
T Consensus 42 ~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~--V~f~~-~~s~---------------~~~~~~ 103 (229)
T 2yle_A 42 YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGA--VTLAP-AADD---------------AGEPPP 103 (229)
T ss_dssp HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSC--EEECC-C------------------------
T ss_pred cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCc--eeccc-cccc---------------ccccCC
Confidence 45789999999999999999877621 11123344568999999987 33332 1100 013346
Q ss_pred cccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHccCcccccCCCHHHHHHHHHcccc
Q 004442 678 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDP 748 (753)
Q Consensus 678 ~APE~l~~~~~t~ksDIwSfGvvL~EllTG~~~Pf~~~~~~~~~~i~~~~~~~~~~~s~el~dLI~~cL~~ 748 (753)
.|||... ...+.+.=|||||++||.-+--+ .| .......|+++.+||..|.+-
T Consensus 104 ~~pe~~~-~~~te~~~IysLG~tLY~ALDyg-L~----------------e~eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 104 VAGKLGY-SQCMETEVIESLGIIIYKALDYG-LK----------------ENEERELSPPLEQLIDHMANT 156 (229)
T ss_dssp ---CCSS-SSSCHHHHHHHHHHHHHHHHTTT-CC----------------TTEEECCCHHHHHHHHHHTTC
T ss_pred CChhhcc-ccchHHHHHHHHHHHHHHHhhcC-CC----------------cccchhhCHHHHHHHHHHHhc
Confidence 6888653 45678999999999999877642 22 223457788888888888654
No 303
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.04 E-value=0.28 Score=52.29 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=26.8
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceecc
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~~ 659 (753)
.++|+|+.+.||+++.++. +.|.||+.+....
T Consensus 207 ~~~HgD~~~~N~l~~~~~~--~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 207 VLCHSDIHAGNVLVGNEES--IYIIDWDEPMLAP 238 (339)
T ss_dssp EEECSCCCGGGEEECGGGC--EEECCCSSCEEEC
T ss_pred eeEeCCCCcCCEEEeCCCe--EEEEECCCCeeCC
Confidence 6999999999999976544 7899999887654
No 304
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=93.60 E-value=0.036 Score=58.30 Aligned_cols=42 Identities=10% Similarity=0.037 Sum_probs=31.4
Q ss_pred cccccccccCCccccccc-cccCC-CcccceeecCccccccCCC
Q 004442 262 GDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLP 303 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~ 303 (753)
..|+.+.+.+|+++|.+| .+..+ .|+.||+++|+++|.||..
T Consensus 244 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp TTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred CCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 345777777888888886 46666 6888888888888888764
No 305
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=93.56 E-value=0.1 Score=49.64 Aligned_cols=51 Identities=8% Similarity=-0.164 Sum_probs=33.4
Q ss_pred ccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 261 IGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 261 ~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
...++.+.+.+|++++-.| .+.++ .|+.|+|++|++++..|..+..+..|.
T Consensus 29 ~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~ 81 (170)
T 3g39_A 29 PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLT 81 (170)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCC
Confidence 3456777777787777765 36666 677788888888766555554444443
No 306
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=93.52 E-value=0.1 Score=49.68 Aligned_cols=67 Identities=9% Similarity=-0.092 Sum_probs=43.5
Q ss_pred CCCcccccCCCCccccccccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
+++|.+.+..+-.-.....|+.+.+.+|++++-.+. +..+ .|+.|+|++|+|++..|..+..+..|.
T Consensus 37 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 105 (170)
T 3g39_A 37 LYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLT 105 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCC
Confidence 566666654331111223567888889999865553 5677 689999999999987666565554443
No 307
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=93.31 E-value=0.8 Score=47.13 Aligned_cols=111 Identities=17% Similarity=0.139 Sum_probs=74.9
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCC--cccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP--IYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 123 (753)
.-+.+.+++.||+|+++|..+++..|.+..+.. -+..+......|....|..+.++..+|+-+...|++. .+...
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-- 272 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP-- 272 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS--
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC--
Confidence 345678888999999999999999999887432 2111111122233334666677788888887777765 44422
Q ss_pred HHHHhCceeecCCe-eeeec-eeeeEEEEecccccEEecc
Q 004442 124 EYIRRMPYISKDGG-VTLGA-MKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 124 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 161 (753)
+ .....++.||. +++.. ...++..+|..+|+++...
T Consensus 273 ~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 273 E--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp S--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred C--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 1 24566788886 55554 5678899999999998874
No 308
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=93.21 E-value=0.12 Score=49.43 Aligned_cols=49 Identities=12% Similarity=-0.044 Sum_probs=29.4
Q ss_pred cccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCC
Q 004442 262 GDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSL 310 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l 310 (753)
..++.+.+.+|+|++.+| .+.++ .|+.|+|++|+|++-.+..+..+.+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L 83 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQL 83 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchh
Confidence 455666677777776665 35555 57777777777776444334433333
No 309
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=93.11 E-value=0.13 Score=49.13 Aligned_cols=67 Identities=9% Similarity=-0.061 Sum_probs=40.2
Q ss_pred CCCcccccCCCCccccccccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
+++|.+.+..+-.-.....|+.+.+.+|+|++-.+. +..+ .|+.|||++|++++..+..+..+.+|.
T Consensus 40 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 108 (174)
T 2r9u_A 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLT 108 (174)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCS
T ss_pred eCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCC
Confidence 566666544321111223457778888888874443 4566 688888888888875554455444433
No 310
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=92.87 E-value=0.1 Score=50.69 Aligned_cols=49 Identities=6% Similarity=-0.050 Sum_probs=27.6
Q ss_pred ccccccccCCcccccccc--ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYR--LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~--l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.++.+.+.+|++++..+. +..+ .|+.|+|++|++++.+|..+..+..|.
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 81 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQ 81 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCC
Confidence 455566666666555542 4455 466666666666666665555444433
No 311
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=92.73 E-value=0.13 Score=54.43 Aligned_cols=49 Identities=10% Similarity=-0.078 Sum_probs=39.6
Q ss_pred ccccccccC-Cccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCH-TQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~n-N~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.|.+ |+|++-.+ .+.+| .|+.|+|++|+|+|.+|..+..+.+|.
T Consensus 32 ~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 83 (347)
T 2ifg_A 32 NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83 (347)
T ss_dssp CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC
T ss_pred CeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCC
Confidence 468888886 99998775 58888 799999999999998887776666555
No 312
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=92.59 E-value=0.11 Score=51.67 Aligned_cols=49 Identities=10% Similarity=0.013 Sum_probs=29.5
Q ss_pred ccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++++..+. +.++ .|+.|++++|++++..|..+..+..|.
T Consensus 82 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (220)
T 2v70_A 82 GVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 132 (220)
T ss_dssp TCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS
T ss_pred CCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC
Confidence 345666666666665543 5555 566677777777766666555444443
No 313
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=92.52 E-value=0.059 Score=56.64 Aligned_cols=50 Identities=6% Similarity=-0.029 Sum_probs=41.0
Q ss_pred cccccccccCCccccccccccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 262 GDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
..++.+.+.+|+++|.+|.+..+ .|+.|++++|+++|.+|..+..+..|.
T Consensus 221 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 271 (313)
T 1ogq_A 221 KNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271 (313)
T ss_dssp SCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCC
T ss_pred CCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCC
Confidence 35677888899999999887777 799999999999999998776665554
No 314
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=92.41 E-value=0.15 Score=55.51 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=26.2
Q ss_pred CccccCCCCCcEEEecCC--CCeEEEEeccCceec
Q 004442 626 GLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRL 658 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~--~~~~KLsDFGla~~~ 658 (753)
.++|+|+.+.||+++.+. .-.+.|+||..+...
T Consensus 221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~ 255 (379)
T 3feg_A 221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN 255 (379)
T ss_dssp EEECSCCCGGGEEEESCC---CCEEECCCTTCEEE
T ss_pred EEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC
Confidence 599999999999998761 124789999988753
No 315
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=92.24 E-value=0.087 Score=55.81 Aligned_cols=49 Identities=8% Similarity=-0.143 Sum_probs=28.8
Q ss_pred ccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++.|.+|. +..+ .|+.|++++|++.|.+|..+..+..|.
T Consensus 230 ~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 280 (328)
T 4fcg_A 230 KLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLE 280 (328)
T ss_dssp TCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCC
T ss_pred CCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCC
Confidence 345555666666666653 4444 566666666666666666555544444
No 316
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.13 E-value=1.3 Score=46.30 Aligned_cols=164 Identities=11% Similarity=0.065 Sum_probs=94.5
Q ss_pred CeeEEEe--cCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCC---------CceeeeeccccCcee-
Q 004442 49 DVALVAA--LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDE---------DWELYFHSKRFGKMK- 116 (753)
Q Consensus 49 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~- 116 (753)
+.+.|++ .+++|+.+|..+++..+.+..|.-...-... .|-.+|+.+..+ .-.||+=+...+++.
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~---~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMD---KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEEC---TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEc---CCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 4556666 5899999999999999999876532222221 123355555433 257888777777776
Q ss_pred eeccCHHHHHHhCceeec-CCeeeeeceeeeEEEEecccccEEecccCCCCCCCCCCCcccCcceeccCCcchhhccccc
Q 004442 117 KLSSSAEEYIRRMPYISK-DGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVG 195 (753)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (753)
.+...... --..-.++. ++.++.... +++.+|.+||+++....... +......|
T Consensus 218 ~~~~~~g~-~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~-------~~~~p~gi--------------- 272 (328)
T 3dsm_A 218 QFKFKLGD-WPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEF-------RDTKYYGL--------------- 272 (328)
T ss_dssp EEECCTTC-CCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCC-------CSSCEEEE---------------
T ss_pred EEecCCCC-CceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecC-------CCCceEEE---------------
Confidence 44322111 011224664 445666554 78889999988753321110 00000111
Q ss_pred cccccccceEEEE-----eeeeeeecCCCCceEEEEeeeccc--ceeeeeccc
Q 004442 196 NLKRIRQLVYIMR-----TDYVLQSTSQDSGEVLWNVAYADF--KAEFRCQEV 241 (753)
Q Consensus 196 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 241 (753)
..+...-.|++.- .+-.+.-|.++ |+++|.+.+-.. .-.|-|||.
T Consensus 273 ~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~~~~~~ 324 (328)
T 3dsm_A 273 TVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCWKLEHH 324 (328)
T ss_dssp EECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEEECCCC
T ss_pred EEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEEecccc
Confidence 1111233466662 34467788888 999999988764 345678876
No 317
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=91.94 E-value=0.14 Score=54.08 Aligned_cols=43 Identities=2% Similarity=-0.089 Sum_probs=35.4
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCC
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
.|+.+.|.+|+|+|..| .+.++ .|+.|||++|+|++-.|..+.
T Consensus 57 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 101 (347)
T 2ifg_A 57 ELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ 101 (347)
T ss_dssp CCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTC
T ss_pred CCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcc
Confidence 56888999999999887 56888 799999999999976554443
No 318
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=91.76 E-value=0.3 Score=50.31 Aligned_cols=110 Identities=15% Similarity=0.066 Sum_probs=68.8
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEecCCC---CcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccC
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTGR---PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSS 121 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 121 (753)
+...+.+.+..||+|+++|..+++..+.+..+. |. + .+ ...|....|+-...+..||+-+...|++. .+...
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~--~~-~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG-T--AM-MAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC-E--EE-ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc-e--eE-ECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 344556677789999999999999999998665 33 1 11 11222334555566777887776666655 33321
Q ss_pred HH----HHHHhCceeecCC-eeeeecee------------eeEEEEecccccEEe
Q 004442 122 AE----EYIRRMPYISKDG-GVTLGAMK------------TSVFLVDVKSGRVVD 159 (753)
Q Consensus 122 ~~----~~~~~~~~~~~~~-~~~~~~~~------------~~~~~~~~~~~~~~~ 159 (753)
-. ...-....++.|| .+..+... .+++.+|..+|++..
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 139 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK 139 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccc
Confidence 00 0001234678888 46667654 788899999876544
No 319
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=91.40 E-value=0.12 Score=59.30 Aligned_cols=48 Identities=17% Similarity=0.088 Sum_probs=30.6
Q ss_pred ccccccccCCccccccccccCC-CcccceeecCcccccc-CCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWI-SLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~I-P~~l~s~n~l~ 311 (753)
.|+.+.+.+|+|+| ||.+.++ .|+.|||++|+++|.+ |..+..+..|.
T Consensus 487 ~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~ 536 (567)
T 1dce_A 487 CLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLV 536 (567)
T ss_dssp TCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCC
T ss_pred CCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCC
Confidence 34666666777776 6666666 5777777777777766 66665555444
No 320
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=91.37 E-value=0.19 Score=57.26 Aligned_cols=49 Identities=14% Similarity=-0.002 Sum_probs=33.8
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.++.+.+.+|++++.+| .+.++ .|+.|+|++|++++-.|..+....+|.
T Consensus 495 ~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~ 545 (635)
T 4g8a_A 495 NLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 545 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCC
T ss_pred ccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCC
Confidence 45667777788887776 46666 688888888888877776665544444
No 321
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=90.93 E-value=1.4 Score=44.69 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=72.7
Q ss_pred CeeEEEecCceEEEEeccCCeeeEEecCCC----CcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHH
Q 004442 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGR----PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (753)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 123 (753)
++++++..||+|+++|..+++.++.+..+. |..-. ...|....|..+.++..|++-+...|++. .+.....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~----~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPM----VAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEE----ECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceE----EcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 456778899999999999999999997654 43211 22233334556667778888777777765 4443210
Q ss_pred H---HHHhCceeecCC-eeeeec------------eeeeEEEEecccccEEecc
Q 004442 124 E---YIRRMPYISKDG-GVTLGA------------MKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 124 ~---~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~ 161 (753)
. ---....++.|| .+..+. ...++..+|.++|++++..
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE
Confidence 0 001244678888 566765 3478899999999998774
No 322
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=90.91 E-value=0.36 Score=47.76 Aligned_cols=41 Identities=7% Similarity=-0.051 Sum_probs=19.4
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCC
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPG 304 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l 304 (753)
|+.+.+.+|++++-.+ .+.++ .|+.|+|++|++++..|..+
T Consensus 59 L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 101 (220)
T 2v70_A 59 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMF 101 (220)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGG
T ss_pred CCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHh
Confidence 3444445555554443 34444 35555555555555444333
No 323
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=90.77 E-value=0.35 Score=53.97 Aligned_cols=69 Identities=10% Similarity=-0.019 Sum_probs=40.3
Q ss_pred eEEecccCceEEEEEEeeC-CcEEEEEEeecCCch--HHHHHHHHHHHhCCCCce-eeecccccCCceEEEEEccccC
Q 004442 478 NKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD--VALKEIQNLIASDQHPNI-VRWYGVESDQDFVYLSLERCTC 551 (753)
Q Consensus 478 ~~~IG~G~fG~Vyka~~~~-g~~VAVK~l~~~~~~--~~~~Ei~~ll~~l~HpNI-V~L~g~~~~~~~~~LV~E~c~~ 551 (753)
.+.|+.|-...+|+....+ +..+++|+....... ...+|.. ++..+...++ .++++++. . .+||||+++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~-vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKK-ISCILYNKNIAKKIYVFFT-N---GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHH-HHHHHTTSSSBCCEEEEET-T---EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHH-HHHHHHhcCCCCCEEEEeC-C---eEEEEeeCC
Confidence 3568888889999876654 478889887432211 1234554 4454443444 46777663 2 259998875
No 324
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=90.63 E-value=0.26 Score=48.81 Aligned_cols=49 Identities=14% Similarity=-0.004 Sum_probs=28.5
Q ss_pred ccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++++-.+. +.++ .|+.|+|++|++++..|..+..+..|.
T Consensus 81 ~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 131 (220)
T 2v9t_B 81 SLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 131 (220)
T ss_dssp SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCC
Confidence 346666667776632222 4455 577777777777776666555444443
No 325
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=90.33 E-value=0.32 Score=47.21 Aligned_cols=48 Identities=6% Similarity=-0.039 Sum_probs=27.5
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
|+.+.+.+|++++-.+ .+.++ .|+.|+|++|++++..|..+..+..|.
T Consensus 56 L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~ 105 (193)
T 2wfh_A 56 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105 (193)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCC
T ss_pred CCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCC
Confidence 4555666666665443 35555 566666666666666655554444433
No 326
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=90.14 E-value=0.38 Score=48.43 Aligned_cols=42 Identities=7% Similarity=-0.080 Sum_probs=19.4
Q ss_pred cccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCC
Q 004442 264 VESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
|+.+.+.+|++++-.+. +..+ .|+.|+|++|++++..|..+.
T Consensus 109 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 152 (251)
T 3m19_A 109 LDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFD 152 (251)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcC
Confidence 34444555555533322 3333 455555555555544443333
No 327
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=90.07 E-value=0.43 Score=45.10 Aligned_cols=41 Identities=7% Similarity=-0.130 Sum_probs=19.9
Q ss_pred cccccccCCcccccccc-ccCC-CcccceeecCccccccCCCC
Q 004442 264 VESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPG 304 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l 304 (753)
|+.+.+.+|++++-.+. +..+ .|+.|++++|++++..|..+
T Consensus 54 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 96 (177)
T 2o6r_A 54 LTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVF 96 (177)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHh
Confidence 34555555555543322 3444 45555555555555444333
No 328
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=90.03 E-value=0.38 Score=47.92 Aligned_cols=48 Identities=13% Similarity=-0.011 Sum_probs=26.9
Q ss_pred ccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|+|++-.+. +..+ .|+.|++++|+++ .||..+..+..|.
T Consensus 89 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~ 138 (229)
T 3e6j_A 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLT 138 (229)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCS
T ss_pred CcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCC
Confidence 345566666666654432 3445 5666666666666 5665554444433
No 329
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=89.84 E-value=0.12 Score=36.97 Aligned_cols=29 Identities=17% Similarity=-0.144 Sum_probs=15.3
Q ss_pred ccccceehhhHHHHHHHHHHHHhhheeee
Q 004442 361 VEGFRSYIQSFIVLFIALCPIIGFLFYHS 389 (753)
Q Consensus 361 ~~~~~i~Iv~~~~~vlvll~~i~~~~~~~ 389 (753)
+.+.++.|++++++.+++++.+++++|||
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 44455555555555555555555555544
No 330
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=89.62 E-value=0.44 Score=51.05 Aligned_cols=30 Identities=23% Similarity=0.275 Sum_probs=24.4
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceec
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~ 658 (753)
.++|+|+.+.||+++.++ +.|+||..+...
T Consensus 213 ~l~HgDl~~~Nil~~~~~---~~lID~e~a~~g 242 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC---LRLIDFEYSGFN 242 (369)
T ss_dssp EEECSCCCGGGEEECC-C---EEECCCTTCEEE
T ss_pred EEEeCCCCcccEEecCCc---EEEEEecCCCCC
Confidence 699999999999996443 789999887643
No 331
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=89.59 E-value=0.61 Score=48.87 Aligned_cols=108 Identities=12% Similarity=0.018 Sum_probs=64.7
Q ss_pred CeeEEEe-cCceEEEEeccCCeeeEEecCCCCc----ccccccCCCCCCceeeeccC-CCceeeeeccccCcee-eeccC
Q 004442 49 DVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPI----YSSYQASFNSNASEFYLDVD-EDWELYFHSKRFGKMK-KLSSS 121 (753)
Q Consensus 49 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 121 (753)
+.+.|++ .||+|+.+|..+++..|.+..|... .....+- .+..+ |..+. .+-.+++-+...+++. ++...
T Consensus 95 g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~l-yv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 95 EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYV-YVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEE-EEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEE-EEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 3455665 6899999999999999998877611 0011111 11122 23222 2445555555555554 33211
Q ss_pred HHHHHHhCceeecCCeeeeecee-----------eeEEEEecccccEEeccc
Q 004442 122 AEEYIRRMPYISKDGGVTLGAMK-----------TSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 162 (753)
. --..=.++.||.+.++... .+++.+|++||+++....
T Consensus 172 --~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~ 220 (328)
T 3dsm_A 172 --I-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK 220 (328)
T ss_dssp --S-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE
T ss_pred --C-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe
Confidence 0 0012246778999988875 489999999999987743
No 332
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.14 E-value=0.18 Score=37.28 Aligned_cols=6 Identities=33% Similarity=0.334 Sum_probs=2.2
Q ss_pred hheeee
Q 004442 384 FLFYHS 389 (753)
Q Consensus 384 ~~~~~~ 389 (753)
++++|+
T Consensus 32 ~~~~RR 37 (44)
T 2ks1_B 32 GLFMRR 37 (44)
T ss_dssp HHHHHT
T ss_pred HHHhhh
Confidence 333333
No 333
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=88.90 E-value=0.94 Score=46.60 Aligned_cols=108 Identities=6% Similarity=0.135 Sum_probs=67.7
Q ss_pred EEEecCceEEEEeccCCeeeEEecCCCCccccccc-------CCCCCCc-eeeeccCCCceeeeeccccCcee-eeccCH
Q 004442 52 LVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQA-------SFNSNAS-EFYLDVDEDWELYFHSKRFGKMK-KLSSSA 122 (753)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 122 (753)
.....||+|+++|..+|+..|.+..+......+.. ....|.. +|.-+..++..+|+-+...+++. .+...
T Consensus 105 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~- 183 (353)
T 3vgz_A 105 FGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT- 183 (353)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-
T ss_pred EEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-
Confidence 33345799999999999999999876532111111 1111222 44333356777888777777665 33311
Q ss_pred HHHHHhCceeecCCe-eeeeceeeeEEEEecccccEEecc
Q 004442 123 EEYIRRMPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 123 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
... -....++.||. ++++.....++.+|..+|+++...
T Consensus 184 ~~~-~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 184 GKM-STGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp CTT-CCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CCc-cceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 111 12345777775 788888888999999999999874
No 334
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.67 E-value=0.14 Score=37.75 Aligned_cols=6 Identities=0% Similarity=0.218 Sum_probs=2.2
Q ss_pred hheeee
Q 004442 384 FLFYHS 389 (753)
Q Consensus 384 ~~~~~~ 389 (753)
++++|+
T Consensus 31 ~~~~RR 36 (44)
T 2l2t_A 31 AVYVRR 36 (44)
T ss_dssp HHHHHT
T ss_pred HHHhhh
Confidence 333333
No 335
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=88.66 E-value=0.57 Score=49.61 Aligned_cols=113 Identities=15% Similarity=0.065 Sum_probs=62.9
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEecCCCC---cccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccC
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP---IYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSS 121 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 121 (753)
..+.+++.+..||+|.++|..+++..-.+....+ +.+..-.+.+.. +...+.+|..+++-+-+.|+.. .+.--
T Consensus 180 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~l~sg~~dg~v~~wd~~~~~~~~~~~~h 256 (344)
T 4gqb_B 180 HKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE---VFVFGDENGTVSLVDTKSTSCVLSSAVH 256 (344)
T ss_dssp SCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTT---EEEEEETTSEEEEEESCC--CCEEEECC
T ss_pred CCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCc---ceEEeccCCcEEEEECCCCcEEEEEcCC
Confidence 4456777889999999999999888777643322 222221122222 2344556666655444444322 22100
Q ss_pred HHHHHHhCceeecCCe--eeeeceeeeEEEEecccccEEecccC
Q 004442 122 AEEYIRRMPYISKDGG--VTLGAMKTSVFLVDVKSGRVVDNYVL 163 (753)
Q Consensus 122 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (753)
- .-| ..=.++.||. |..|+..-++..-|..+|++++...|
T Consensus 257 ~-~~v-~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H 298 (344)
T 4gqb_B 257 S-QCV-TGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAH 298 (344)
T ss_dssp S-SCE-EEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCC
T ss_pred C-CCE-EEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCC
Confidence 0 000 0012455663 56788888888899999999877655
No 336
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=88.51 E-value=0.28 Score=54.99 Aligned_cols=28 Identities=7% Similarity=-0.191 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhCCCCceeeecccccCCc
Q 004442 512 VALKEIQNLIASDQHPNIVRWYGVESDQD 540 (753)
Q Consensus 512 ~~~~Ei~~ll~~l~HpNIV~L~g~~~~~~ 540 (753)
++..|+ +++++++|+|||+++|||....
T Consensus 325 eF~~Ev-e~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 325 TERLEC-ERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp CHHHHH-HHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHH-HHHhcccccchhhHHHHhcChH
Confidence 444455 4889999999999999998754
No 337
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=87.97 E-value=2.3 Score=44.06 Aligned_cols=107 Identities=21% Similarity=0.243 Sum_probs=60.0
Q ss_pred CeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHHHH
Q 004442 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYIR 127 (753)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 127 (753)
.+++.+..||+|.++|..+|+....+..+.--...-.-.++. -+.+.+..|..+++-+-..++.. .+. .-.+.+
T Consensus 93 ~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~g~~dg~v~i~~~~~~~~~~~~~-~~~~~v- 167 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS---QYLATGTHVGKVNIFGVESGKKEYSLD-TRGKFI- 167 (321)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTS---SEEEEECTTSEEEEEETTTCSEEEEEE-CSSSCE-
T ss_pred CEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCC---CEEEEEcCCCcEEEEEcCCCceeEEec-CCCceE-
Confidence 466778899999999999999999887654211111111111 12333444444444333333322 111 000000
Q ss_pred hCceeecCC-eeeeeceeeeEEEEecccccEEec
Q 004442 128 RMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 128 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
..-.++.|| .+..|+...++...|.++|+.++.
T Consensus 168 ~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 168 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 201 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 011234455 366788888899999999999887
No 338
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=87.95 E-value=0.85 Score=44.14 Aligned_cols=54 Identities=19% Similarity=0.048 Sum_probs=42.4
Q ss_pred ccccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 257 GMDLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 257 ~~~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
+..+...++.+.+.+|+|+ .|| .+.++ .|+.|++++|++++..|..+..+..|.
T Consensus 26 p~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~ 81 (193)
T 2wfh_A 26 PKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81 (193)
T ss_dssp CSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCC
Confidence 3334457888999999998 675 57777 799999999999998887777666655
No 339
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=87.62 E-value=0.65 Score=43.85 Aligned_cols=52 Identities=4% Similarity=-0.110 Sum_probs=34.8
Q ss_pred cccccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 260 LIGDVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 260 ~~~~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
....++.+.+.+|++++-.+. +..+ .|+.|++++|++++..+..+.....|.
T Consensus 26 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 79 (177)
T 2o6r_A 26 IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLT 79 (177)
T ss_dssp CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccC
Confidence 334667778888888865543 4666 688888888888876665555444443
No 340
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=87.01 E-value=2.9 Score=43.78 Aligned_cols=107 Identities=15% Similarity=0.184 Sum_probs=72.1
Q ss_pred eeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHHHHh
Q 004442 50 VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYIRR 128 (753)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 128 (753)
+++.+..||+|+++|..+++..+.+..+...++.- ...|....|+.+.+|..+|+-+...|++. .+.. ..-+ .
T Consensus 88 l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~---~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~-~ 161 (391)
T 1l0q_A 88 VYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLA---LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV--GRSP-K 161 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEE---ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--CSSE-E
T ss_pred EEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEE---ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec--CCCc-c
Confidence 33444467999999999999999998776553321 22333444567788888988887777765 2221 1111 3
Q ss_pred CceeecCCe-e-eeeceeeeEEEEecccccEEeccc
Q 004442 129 MPYISKDGG-V-TLGAMKTSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 129 ~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 162 (753)
...++.||. + ..++...++...|.++|+.+....
T Consensus 162 ~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 197 (391)
T 1l0q_A 162 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK 197 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 445777884 4 456777789999999999887743
No 341
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=86.83 E-value=2.3 Score=45.50 Aligned_cols=115 Identities=11% Similarity=0.013 Sum_probs=73.0
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEecC---CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccC
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGT---GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSS 121 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 121 (753)
+..+..++++.||+|.++|..+++..+.|.. ..++.+.--.+ + .-+.+.+..|..+++-+-+.++.. .+...
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~-~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE-E---CCVLILGTTRGIIDIWDIRFNVLIRSWSFG 255 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT-T---SCEEEEEETTSCEEEEETTTTEEEEEEBCT
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC-C---CCEEEEEcCCCeEEEEEcCCccEEEEEecC
Confidence 3466888999999999999999999999975 34553322211 1 123445556666655554444433 22110
Q ss_pred HH---HHHHhCceeecCC-eeeeeceeeeEEEEecccccEEec-ccCC
Q 004442 122 AE---EYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDN-YVLD 164 (753)
Q Consensus 122 ~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 164 (753)
-. .-++..|.++.|| .+..|+...++...|.++|+.+.. ..++
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 303 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD 303 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSS
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCC
Confidence 00 0112345666777 677888888999999999999988 4443
No 342
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=86.70 E-value=0.85 Score=45.01 Aligned_cols=53 Identities=8% Similarity=-0.088 Sum_probs=38.6
Q ss_pred ccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 259 DLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 259 ~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.+...++.+.+.+|++++-.+ .+..+ .|+.|+|++|++++..|..+..+.+|.
T Consensus 29 ~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~ 83 (220)
T 2v9t_B 29 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLN 83 (220)
T ss_dssp SCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCC
T ss_pred ccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCC
Confidence 344567778888888886554 56666 688888888888888787776665554
No 343
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=86.48 E-value=0.93 Score=46.12 Aligned_cols=38 Identities=5% Similarity=-0.136 Sum_probs=16.5
Q ss_pred ccccccCCcccccccc-ccCC-CcccceeecCccccccCC
Q 004442 265 ESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISL 302 (753)
Q Consensus 265 ~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~ 302 (753)
+.+.+.+|++++..+. +..+ .|+.|++++|+++|..|.
T Consensus 160 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 199 (272)
T 3rfs_A 160 TELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDG 199 (272)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHH
Confidence 4444444444433322 2333 344445555555444443
No 344
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=86.48 E-value=0.24 Score=45.42 Aligned_cols=45 Identities=9% Similarity=0.023 Sum_probs=24.9
Q ss_pred cccccccCCccccccccc-cCC-CcccceeecCccccc-cCCCCCCCC
Q 004442 264 VESHLPCHTQMTASVYRL-RDN-SLPEFLSVIGKVAGW-ISLPGSSQN 308 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~l-~~l-~L~~LnlsnN~fsG~-IP~~l~s~n 308 (753)
++.+.+.+|++++.+|.. ..+ .|+.|++++|++++. .|..+..+.
T Consensus 66 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~ 113 (149)
T 2je0_A 66 LKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLE 113 (149)
T ss_dssp CCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCT
T ss_pred CCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCC
Confidence 455666666666666543 224 566666666666662 334444333
No 345
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=86.02 E-value=1.1 Score=43.51 Aligned_cols=38 Identities=5% Similarity=-0.047 Sum_probs=18.5
Q ss_pred cccccccCCcccccccc-ccCC-CcccceeecCccccccC
Q 004442 264 VESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWIS 301 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP 301 (753)
|+.+.+.+|++++-.+. +..+ .|+.|++++|++++..+
T Consensus 102 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 102 LKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCH
Confidence 34445555555543332 3444 45555555555554444
No 346
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=85.64 E-value=1.5 Score=46.13 Aligned_cols=106 Identities=10% Similarity=0.104 Sum_probs=71.1
Q ss_pred EEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCceeeeccCHHHHHHhCce
Q 004442 52 LVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPY 131 (753)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (753)
+.+..||+|+++|..+|+..+.+..+.++.+.-. ..|....|..+.+|..+++-+...|++...- ....- -....
T Consensus 48 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~---spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~-~~~~~-~~~~~ 122 (391)
T 1l0q_A 48 VANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV---SPDGKQVYVTNMASSTLSVIDTTSNTVAGTV-KTGKS-PLGLA 122 (391)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEE---CTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ECSSS-EEEEE
T ss_pred EECCCCCeEEEEECCCCeEEEEEECCCCccceEE---CCCCCEEEEEECCCCEEEEEECCCCeEEEEE-eCCCC-cceEE
Confidence 4444899999999999999999988876633222 1222333455667778888777777665221 11111 13345
Q ss_pred eecCCe-e-eeeceeeeEEEEecccccEEeccc
Q 004442 132 ISKDGG-V-TLGAMKTSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 132 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 162 (753)
++.||. + ..|+...++...|.++|++++...
T Consensus 123 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 123 LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 777875 4 567778899999999999998843
No 347
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=85.56 E-value=0.65 Score=52.13 Aligned_cols=35 Identities=11% Similarity=-0.014 Sum_probs=17.1
Q ss_pred ccccccccCCccccccccccCC-CcccceeecCccccccC
Q 004442 263 DVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWIS 301 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP 301 (753)
.++.+.+.+|+++|.+ ..+ .|+.|||++|+++ .||
T Consensus 432 ~L~~L~Ls~N~l~~~~---~~l~~L~~L~Ls~N~l~-~ip 467 (549)
T 2z81_A 432 TLEVLDVSNNNLDSFS---LFLPRLQELYISRNKLK-TLP 467 (549)
T ss_dssp TCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-SCC
T ss_pred CceEEECCCCChhhhc---ccCChhcEEECCCCccC-cCC
Confidence 4455555555555533 122 3555555555555 344
No 348
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=85.55 E-value=0.46 Score=50.14 Aligned_cols=49 Identities=10% Similarity=-0.117 Sum_probs=38.4
Q ss_pred ccccccccCCccccccccccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|+++|-.+.+..+ .|+.|++++|++.|.+|..+..+..|.
T Consensus 207 ~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 207 NLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp TCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred CCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 5677788889998755667777 688899999999999988877666555
No 349
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=85.46 E-value=1.6 Score=44.20 Aligned_cols=109 Identities=11% Similarity=-0.026 Sum_probs=64.1
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCceeeeccCHHHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (753)
..+..++++.||+|+++|..+++....+....++.+--..+ +.+ +.+-+.+|..+++-+-..+++..+.-. +..+
T Consensus 194 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~-~~~---~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~~v 268 (337)
T 1gxr_A 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCP-TGE---WLAVGMESSNVEVLHVNKPDKYQLHLH-ESCV 268 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECT-TSS---EEEEEETTSCEEEEETTSSCEEEECCC-SSCE
T ss_pred CCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECC-CCC---EEEEEcCCCcEEEEECCCCCeEEEcCC-ccce
Confidence 45677888999999999999999999998877774432211 111 233334444555444444433322100 0000
Q ss_pred HhCceeecCC-eeeeeceeeeEEEEecccccEEecc
Q 004442 127 RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 127 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
..-.++.|| .+..|+...++...|..+|+.+...
T Consensus 269 -~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 303 (337)
T 1gxr_A 269 -LSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp -EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred -eEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe
Confidence 011233344 3667777778888888888887654
No 350
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=85.45 E-value=0.53 Score=53.98 Aligned_cols=46 Identities=11% Similarity=0.016 Sum_probs=29.1
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|+|+ +|| .+..+ .|+.|||++|+++| || .+..+.+|.
T Consensus 464 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~ 511 (567)
T 1dce_A 464 LVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQ 511 (567)
T ss_dssp TCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCC
T ss_pred cCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCc
Confidence 4566667777777 665 45555 57777777777777 66 454444433
No 351
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=85.39 E-value=0.52 Score=52.30 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=20.7
Q ss_pred cccccccCCccccccccccCC-CcccceeecCcccc
Q 004442 264 VESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAG 298 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG 298 (753)
++.+.+.+|+|+| ++ +..+ .|+.||+++|+|+|
T Consensus 320 L~~L~L~~N~l~~-l~-l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 320 LVYLYLNNTELTE-LD-VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CCEEECTTCCCSC-CC-CTTCTTCSEEECCSSCCCB
T ss_pred CCEEECCCCcccc-cc-cccCCcCcEEECCCCCCCC
Confidence 4555566777776 33 5555 56667777777766
No 352
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=85.36 E-value=1.5 Score=43.35 Aligned_cols=53 Identities=11% Similarity=-0.058 Sum_probs=35.1
Q ss_pred ccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 259 DLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 259 ~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.+...++.+.+.+|++++..| .+..+ .|+.|+|++|++++..+..+..+..|.
T Consensus 37 ~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 91 (229)
T 3e6j_A 37 GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91 (229)
T ss_dssp CCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcC
Confidence 344567778888888888765 35666 688888888888654444444444443
No 353
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=85.15 E-value=1.3 Score=44.42 Aligned_cols=44 Identities=11% Similarity=-0.114 Sum_probs=21.6
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCC
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSS 306 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s 306 (753)
+++.+.+.+|++++..+ .+.++ .|+.|++++|++++..|..+..
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD 81 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc
Confidence 44555555555555443 24444 4555555555555544444433
No 354
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=85.10 E-value=0.34 Score=44.37 Aligned_cols=41 Identities=15% Similarity=0.116 Sum_probs=28.4
Q ss_pred ccccccccCCccccccccccCC-CcccceeecCccccccCCCC
Q 004442 263 DVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISLPG 304 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~~l 304 (753)
.++.+.+.+|++++. +.+..+ .|+.|++++|++++.+|..+
T Consensus 43 ~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~ 84 (149)
T 2je0_A 43 ELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLA 84 (149)
T ss_dssp TCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHH
T ss_pred CCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHh
Confidence 456667777777765 556666 67778888888877766543
No 355
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=85.00 E-value=1.3 Score=46.71 Aligned_cols=110 Identities=19% Similarity=0.201 Sum_probs=65.9
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHH
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (753)
-..++.++.||+|.++|..+|+....|.. ..++++.-- +.+..-.++.+++|..+.+-+-+.++.. .+.......
T Consensus 139 g~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~---~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 215 (344)
T 4gqb_B 139 GTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAA---SPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY 215 (344)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEe---cCCCCCceeeeccccccccccccccceeeeeecceeec
Confidence 35667788999999999999999888863 344433221 1121123567888888877766666543 332211111
Q ss_pred HHhCceee-cCCe-eeeeceeeeEEEEecccccEEec
Q 004442 126 IRRMPYIS-KDGG-VTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 126 ~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
.-..=.++ +++. +..|+...++...|.++|+.+++
T Consensus 216 ~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~ 252 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS 252 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE
T ss_pred cceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE
Confidence 10111122 3443 56788888899999999999888
No 356
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=84.88 E-value=1.5 Score=46.24 Aligned_cols=111 Identities=14% Similarity=0.139 Sum_probs=66.8
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecCC-CCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHH
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTG-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (753)
...++.++.||+|.++|..+++....|... .++.+--- ..+..-+++.+.+|..+++-+-+.++.. .+.....+-
T Consensus 151 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~---s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~ 227 (357)
T 4g56_B 151 GTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAA---CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDT 227 (357)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCS
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE---ccCCCceeeeeccCCceEEEECCCCceeeeeeeccccc
Confidence 356677889999999999999999998753 33432211 1111223567777777776555555433 121111100
Q ss_pred HHhCceeecC-C-eeeeeceeeeEEEEecccccEEecc
Q 004442 126 IRRMPYISKD-G-GVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 126 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
.-..=.++.+ + .+..|+...++...|.++|+.+++.
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS 265 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEEE
Confidence 0001112333 3 3667888888999999999988874
No 357
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=84.41 E-value=2.6 Score=44.14 Aligned_cols=107 Identities=12% Similarity=0.152 Sum_probs=68.9
Q ss_pred eeEEEecCceEEEEeccCCeeeEEecC-------CCCcccccccCCCCCCceeeeccCCC---ceeeeeccccCcee-ee
Q 004442 50 VALVAALDGTIHLVDTKLGKIRWSFGT-------GRPIYSSYQASFNSNASEFYLDVDED---WELYFHSKRFGKMK-KL 118 (753)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~ 118 (753)
..++++.||+|+++|..+++..+.|.. ..++.+.--.+. . -+.+.+.+| ..+++-+-+.++.. .+
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~-~---~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ-G---SLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS-T---TEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC-C---CEEEEEecCCCCceEEEEECCCCccccee
Confidence 778889999999999999999999987 777744333221 1 234555666 67776665555543 22
Q ss_pred ccC------------HHHHHHhCceeecCC-eeeeeceeeeEEEEecccccEEecc
Q 004442 119 SSS------------AEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 119 ~~~------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
.-. -...| ..-.++.|| .+..|+...++...|.++|+.+...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWV-MSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp CBC--------CCBSBSSCE-EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ccCcccccccccccccCCcE-EEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence 210 00000 011233344 5667888888999999999998884
No 358
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=84.34 E-value=3.2 Score=42.08 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=63.1
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (753)
.....+.++.||+|.++|..+++.+..+..+.++.+....+ +. +++.+..|..+++-+-+.+.+. .+.......
T Consensus 226 ~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~----~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 300 (340)
T 4aow_A 226 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSP-NR----YWLCAATGPSIKIWDLEGKIIVDELKQEVIST 300 (340)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECS-SS----SEEEEEETTEEEEEETTTTEEEEEECCC----
T ss_pred CCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCC-CC----ceeeccCCCEEEEEECCCCeEEEeccccceee
Confidence 44577788999999999999999999999998885544433 22 3667777777777654444332 222111110
Q ss_pred H--HhCc-----eeecCCe-eeeeceeeeEEEEeccccc
Q 004442 126 I--RRMP-----YISKDGG-VTLGAMKTSVFLVDVKSGR 156 (753)
Q Consensus 126 ~--~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~ 156 (753)
. .... .++.||. +..|+..-++..-|.+||.
T Consensus 301 ~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 301 SSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 0 0011 1344553 4556666677777777774
No 359
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=84.14 E-value=1.5 Score=47.68 Aligned_cols=113 Identities=11% Similarity=0.055 Sum_probs=66.7
Q ss_pred CCCCCeeEEEec-----CceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeecc---------CCCceeeeecc
Q 004442 45 PPEPDVALVAAL-----DGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDV---------DEDWELYFHSK 110 (753)
Q Consensus 45 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 110 (753)
||-...+.|++. +|+|+.+|..++++.+.+.+|.--+ -.. ..|...-|... +++-.+.+=+.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~---spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVV---ADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEE---CTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEE---CCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 466777888887 7999999999999999999885432 111 11222222221 12223444444
Q ss_pred ccCcee-eeccCHHH--HHHhCc---eeecCCe-eeeece--eeeEEEEecccccEEecc
Q 004442 111 RFGKMK-KLSSSAEE--YIRRMP---YISKDGG-VTLGAM--KTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 111 ~~~~~~-~~~~~~~~--~~~~~~---~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~ 161 (753)
..+++. .+...... .+...| .++.||. +++... ..++-.||..|++++.+-
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 444443 33321100 000122 5677885 666653 568889999999999874
No 360
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=83.92 E-value=6.5 Score=40.57 Aligned_cols=109 Identities=18% Similarity=0.252 Sum_probs=62.6
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 124 (753)
.....++++.||+|.++|..+++....|.. ..|+.+---.| +. -+.+.+++|..+++-+-+.++.. .+.-- ..
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-d~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~h-~~ 249 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DS---QLLVTASDDGYIKIYDVQHANLAGTLSGH-AS 249 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT-TS---CEEEEECTTSCEEEEETTTCCEEEEECCC-SS
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC-CC---CEEEEEcCCCeEEEEECCCcceeEEEcCC-CC
Confidence 345677889999999999999999888863 33553221111 11 13445555555555444333322 11100 00
Q ss_pred HHHhCceeecCC-eeeeeceeeeEEEEecccccEEecc
Q 004442 125 YIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 125 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
.| ..-.++.|| .+..|+...++..-|.++|+.+++.
T Consensus 250 ~v-~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 250 WV-LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp CE-EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ce-EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence 00 011233344 4667887788888999999999883
No 361
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=83.91 E-value=1.2 Score=46.29 Aligned_cols=42 Identities=12% Similarity=0.003 Sum_probs=28.2
Q ss_pred ccccccccCCccccccc-cccCC----CcccceeecCccccccCCCCC
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN----SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l----~L~~LnlsnN~fsG~IP~~l~ 305 (753)
.|+.+.+.+|++++.+| .+..+ .|+.||+++|+++ .||..+.
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~ 271 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP 271 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc
Confidence 45677777888887764 33333 5777888888888 6666553
No 362
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=83.77 E-value=0.78 Score=50.43 Aligned_cols=47 Identities=13% Similarity=-0.042 Sum_probs=25.9
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCC
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSL 310 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l 310 (753)
|+.+.+.+|+|++..| .+.++ .|+.|++++|++++..|..+..+.+|
T Consensus 220 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 268 (452)
T 3zyi_A 220 LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASL 268 (452)
T ss_dssp CCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred ccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCC
Confidence 4555556666666554 34455 46666666666666555555444333
No 363
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=83.54 E-value=4.7 Score=43.31 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=15.2
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEe
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSF 74 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (753)
.+..+.++.||+|.++|..+|+..+.+
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~~~ 155 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLRTL 155 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred CCEEEEEECCCcEEEEECCCCcEEEEE
Confidence 455556666666666665555554444
No 364
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=83.25 E-value=0.65 Score=53.78 Aligned_cols=9 Identities=22% Similarity=0.372 Sum_probs=4.5
Q ss_pred chhHHHhhh
Q 004442 29 NRYVSEIYN 37 (753)
Q Consensus 29 ~~~~~~~~~ 37 (753)
..|+.+||+
T Consensus 32 ~~aL~~~~~ 40 (636)
T 4eco_A 32 YLALKEIWD 40 (636)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 345555555
No 365
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=83.12 E-value=1.1 Score=46.20 Aligned_cols=42 Identities=10% Similarity=-0.074 Sum_probs=22.3
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCCC
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
|+.+.+.+|++++..| .+..+ .|+.|++++|++++..+..+.
T Consensus 177 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 220 (306)
T 2z66_A 177 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK 220 (306)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGT
T ss_pred CCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhcc
Confidence 4555555666665543 34444 466666666666655443433
No 366
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=83.11 E-value=1.4 Score=42.66 Aligned_cols=48 Identities=8% Similarity=-0.071 Sum_probs=28.2
Q ss_pred ccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCC
Q 004442 263 DVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSL 310 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l 310 (753)
.|+.+.+.+|++++-.+. +..+ .|+.|++++|++++..+..+..+..|
T Consensus 77 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 126 (208)
T 2o6s_A 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQL 126 (208)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcC
Confidence 446666667777754432 4555 57777777777776555444444333
No 367
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=82.63 E-value=0.94 Score=49.56 Aligned_cols=40 Identities=10% Similarity=-0.126 Sum_probs=18.5
Q ss_pred ccccccCCccccccc-cccCC-CcccceeecCccccccCCCC
Q 004442 265 ESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPG 304 (753)
Q Consensus 265 ~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l 304 (753)
+.+.+.+|++++..+ .+.++ .|+.|||++|++++..+..+
T Consensus 234 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 275 (440)
T 3zyj_A 234 QKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLF 275 (440)
T ss_dssp CEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred CEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHh
Confidence 444444555554433 23344 45555555555554444333
No 368
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=82.61 E-value=2.7 Score=42.85 Aligned_cols=109 Identities=12% Similarity=-0.018 Sum_probs=66.6
Q ss_pred eeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCceeeeccCHHHHHHhC
Q 004442 50 VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRM 129 (753)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (753)
+.+.+..||+|+++|..+|+....+..|..-. +.+ ...|....|..+..+..||+-+...|++....++...-....
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--~~~-~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFV--DTA-ITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD 88 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECCCCEE--EEE-ECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEccCCcc--eEE-EcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc
Confidence 34555678999999999999988776542211 222 222333345555556688887777777521112222211112
Q ss_pred ceeecCCe-eeeeceee---eEEEEecccccEEecc
Q 004442 130 PYISKDGG-VTLGAMKT---SVFLVDVKSGRVVDNY 161 (753)
Q Consensus 130 ~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~ 161 (753)
..++.||. +..+.... ++..+|.++|++++..
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~ 124 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI 124 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEE
Confidence 56788887 44444432 8999999999998874
No 369
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=82.60 E-value=7.4 Score=42.42 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=25.5
Q ss_pred CccccCCCCCcEEEecCC----CCeEEEEeccCcee
Q 004442 626 GLIHRDLKPQNVLISKDK----SFCAKLSDMGISKR 657 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~----~~~~KLsDFGla~~ 657 (753)
.++|+|+.+.||+++.+. .-.+.|+||..|..
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 599999999999997761 12488999988764
No 370
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=82.56 E-value=1.1 Score=51.37 Aligned_cols=36 Identities=8% Similarity=-0.100 Sum_probs=18.8
Q ss_pred ccccccccCCccccccccccCC-CcccceeecCccccccCC
Q 004442 263 DVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISL 302 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~ 302 (753)
.|+.+.+.+|+|+| ||. .+ .|+.|++++|++++ ||.
T Consensus 121 ~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~l~~-lp~ 157 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE--LPALLEYINADNNQLTM-LPE 157 (571)
T ss_dssp TCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC
T ss_pred CCCEEECCCCcCCC-CCC--cCccccEEeCCCCccCc-CCC
Confidence 44555555555555 544 23 45555555555555 444
No 371
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=82.52 E-value=2.5 Score=42.86 Aligned_cols=41 Identities=5% Similarity=-0.109 Sum_probs=19.8
Q ss_pred cccccccCCcccccccc-ccCC-CcccceeecCccccccCCCC
Q 004442 264 VESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPG 304 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l 304 (753)
|+.+.+.+|++++..+. +..+ .|+.|++++|++++..|..+
T Consensus 111 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 153 (272)
T 3rfs_A 111 LKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVF 153 (272)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHh
Confidence 34445555555544432 3444 45555555555554444333
No 372
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=82.13 E-value=0.59 Score=43.66 Aligned_cols=37 Identities=11% Similarity=0.044 Sum_probs=19.4
Q ss_pred cccccccCCccccccccccCC-CcccceeecCccccccC
Q 004442 264 VESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWIS 301 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP 301 (753)
|+.+.+.+|++++. +.+..+ .|+.|++++|++++.+|
T Consensus 51 L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~ 88 (168)
T 2ell_A 51 LEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLD 88 (168)
T ss_dssp CCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCC
T ss_pred CCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHH
Confidence 34445555555544 444444 45555555555555544
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=82.12 E-value=1.1 Score=52.74 Aligned_cols=11 Identities=27% Similarity=0.111 Sum_probs=4.6
Q ss_pred cccceeecCcc
Q 004442 286 LPEFLSVIGKV 296 (753)
Q Consensus 286 L~~LnlsnN~f 296 (753)
|+.|+|++|+|
T Consensus 295 L~~L~L~~N~l 305 (727)
T 4b8c_D 295 LKYFYFFDNMV 305 (727)
T ss_dssp CSEEECCSSCC
T ss_pred CCEEECCCCCC
Confidence 44444444444
No 374
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=81.93 E-value=5.6 Score=42.74 Aligned_cols=105 Identities=12% Similarity=0.121 Sum_probs=55.5
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecCC-CCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHH
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTG-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (753)
++..++++.||+|.++|..+++..+.+... .++.+.-. +. -+.+.+..|..+++-+-+.++.. .+.-.-...
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~---~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 282 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DG---RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 282 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE---CS---SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCE
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE---CC---CEEEEEcCCCEEEEEECCCCcEeEEecCCCCce
Confidence 355677778888888888777777777532 22211110 11 12344455555555444433322 111000000
Q ss_pred HHhCceeecCCeeeeeceeeeEEEEecccccEEecc
Q 004442 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
.... + +...+..|+...++...|..+|+.+.+.
T Consensus 283 ~~~~--~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 315 (445)
T 2ovr_B 283 YSLQ--F-DGIHVVSGSLDTSIRVWDVETGNCIHTL 315 (445)
T ss_dssp EEEE--E-CSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEE--E-CCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 0000 1 3445777777788888888888888773
No 375
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=81.87 E-value=1.5 Score=47.77 Aligned_cols=48 Identities=4% Similarity=-0.173 Sum_probs=26.4
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
|+.+.+.+|++++..| .+..+ .|+.||+++|++++.+|..+..+..|.
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 374 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLK 374 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccccccc
Confidence 4555555666655543 34444 566666666666666665555444433
No 376
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=81.85 E-value=3.8 Score=43.24 Aligned_cols=100 Identities=13% Similarity=0.176 Sum_probs=63.6
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEe-cCCCCcccccccCCCCCCceeeeccCCCceeeeecccc-----------C
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSF-GTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRF-----------G 113 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 113 (753)
+..+..++++.||+|.++|..+++....+ ....++.+.--.+ +. -+.+.+..|..+++-+-.. +
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~ 182 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFP-SG---EALISSSQDMQLKIWSVKDGSNPRTLIGHRA 182 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECT-TS---SEEEEEETTSEEEEEETTTCCCCEEEECCSS
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECC-CC---CEEEEEeCCCeEEEEeCCCCcCceEEcCCCC
Confidence 45567888899999999999999888876 3444553221111 11 1234455555555444333 3
Q ss_pred ceeeeccCHHHHHHhCceeecCC-eeeeeceeeeEEEEecccccEEecc
Q 004442 114 KMKKLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
.|..+.| +.|| .+..|+...++...|.++|+.++..
T Consensus 183 ~v~~~~~------------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 183 TVTDIAI------------IDRGRNVLSASLDGTIRLWECGTGTTIHTF 219 (420)
T ss_dssp CEEEEEE------------ETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cEEEEEE------------cCCCCEEEEEcCCCcEEEeECCCCceeEEe
Confidence 3333333 3354 4777888888999999999999884
No 377
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=81.77 E-value=1.2 Score=50.94 Aligned_cols=37 Identities=14% Similarity=-0.065 Sum_probs=24.6
Q ss_pred cccccccccCCccccccccccCC-CcccceeecCccccccCC
Q 004442 262 GDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISL 302 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~ 302 (753)
..|+.+.+.+|+|++ ||. .+ .|+.|+|++|++++ ||.
T Consensus 140 ~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~ 177 (571)
T 3cvr_A 140 ALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPE 177 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC
T ss_pred ccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC-cch
Confidence 355666677777776 655 33 57777777777777 665
No 378
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=81.68 E-value=5.9 Score=41.53 Aligned_cols=101 Identities=12% Similarity=0.012 Sum_probs=62.3
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecC-------CCCcccccccCCCCCCceeeeccCCCc---eeeeeccc------
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-------GRPIYSSYQASFNSNASEFYLDVDEDW---ELYFHSKR------ 111 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------ 111 (753)
..+.+.++.||+|.++|..+++....+.. +.++.+.-..+.+ .-+++.+.+|. .+++-+-+
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~d~~~~~i~~~d~~~~~~~~ 254 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKN---STRVATATGSDNDPSILIWDLRNANTPL 254 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSC---TTEEEEEECCSSSCCCCEEETTSTTSCS
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCC---CCEEEEEECCCCCceEEEEeCCCCCCCc
Confidence 56778889999999999999999998886 4455332221111 11233333443 44433333
Q ss_pred -------cCceeeeccCHHHHHHhCceeecCCeeeeeceeeeEEEEecccccEEecc
Q 004442 112 -------FGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 112 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
.+.|..+.|+. .+...+..|+...++...|.++|+.+...
T Consensus 255 ~~~~~~~~~~v~~~~~s~----------~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 255 QTLNQGHQKGILSLDWCH----------QDEHLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp BCCCSCCSSCEEEEEECS----------SCSSCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred EEeecCccCceeEEEeCC----------CCCCeEEEEeCCCCEEEeeCCCCccceee
Confidence 33344444332 12334677888888999999999998873
No 379
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=81.65 E-value=6.2 Score=43.35 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=24.7
Q ss_pred CccccCCCCCcEEEecCCCCeEEEEeccCceec
Q 004442 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (753)
Q Consensus 626 ~IiHrDLKp~NILL~~d~~~~~KLsDFGla~~~ 658 (753)
.++|+|+.+.||+ +.++. +.|+||..+...
T Consensus 263 ~~~H~D~~~~N~l-~~~~~--~~~IDwe~a~~~ 292 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNN--IRMIDYEYSAIN 292 (424)
T ss_dssp EEECSCCCGGGEE-ECSSC--EEECCCTTCEEE
T ss_pred eEECCCCCcccee-cCCCc--EEEEecccCCcC
Confidence 5999999999999 55544 889999988754
No 380
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=81.62 E-value=1.2 Score=52.64 Aligned_cols=48 Identities=8% Similarity=-0.046 Sum_probs=40.3
Q ss_pred cccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 262 GDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
..|+.+.|.+|+|+ .|| .+.++ .|+.|||++|+|+ .||..+..+..|.
T Consensus 247 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~ 296 (727)
T 4b8c_D 247 DFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLK 296 (727)
T ss_dssp CSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCS
T ss_pred CCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCC
Confidence 35688899999999 887 47777 7999999999999 8998887766655
No 381
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=81.54 E-value=0.86 Score=47.05 Aligned_cols=38 Identities=5% Similarity=0.025 Sum_probs=16.2
Q ss_pred cccccccCCcccc--ccccccCCCcccceeecCccccccC
Q 004442 264 VESHLPCHTQMTA--SVYRLRDNSLPEFLSVIGKVAGWIS 301 (753)
Q Consensus 264 ~~~~l~~nN~ftG--sIp~l~~l~L~~LnlsnN~fsG~IP 301 (753)
|+.+.|.+|+|++ ++..+..+.|+.|+|++|.+++.+|
T Consensus 198 L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 198 LKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCEEECCCCccCCchhhhhcccCCcceEEccCCcCccccC
Confidence 3444444444444 2223333344444444444444433
No 382
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=81.41 E-value=4 Score=42.66 Aligned_cols=110 Identities=11% Similarity=0.105 Sum_probs=71.5
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 124 (753)
..+..++++.||+|+++| .+++..+.+.. ..++.+.--.+ +.+ +.+.+..|..+++-+-..++.. .+...-..
T Consensus 119 ~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGT---HIISMDVENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSS---EEEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCC---EEEEEecCCeEEEEECCCCcEEEEeeccccC
Confidence 456778899999999999 78888888874 34553333222 111 3456667777777666666554 33322111
Q ss_pred HH-------------HhCceeecCCeeeeeceeeeEEEEecccccEEecc
Q 004442 125 YI-------------RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 125 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
-. -..-.++.++.+..|+...++...|.++|+.+...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~ 243 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKL 243 (425)
T ss_dssp ------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEE
T ss_pred ccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeee
Confidence 00 23345567888999999999999999999877663
No 383
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=81.39 E-value=1.7 Score=43.65 Aligned_cols=103 Identities=18% Similarity=0.224 Sum_probs=66.9
Q ss_pred eEEEecCceEEEEeccCCeeeEEec-CCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHHHHh
Q 004442 51 ALVAALDGTIHLVDTKLGKIRWSFG-TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYIRR 128 (753)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 128 (753)
.++++.||+|+++|..+++....+. ...++.+.--.+ +. +++.+..|..+++-+-..++.. .+... ..- -.
T Consensus 198 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~----~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~-i~ 270 (313)
T 3odt_A 198 FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP-NG----DIVSCGEDRTVRIWSKENGSLKQVITLP-AIS-IW 270 (313)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TS----CEEEEETTSEEEEECTTTCCEEEEEECS-SSC-EE
T ss_pred EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec-CC----CEEEEecCCEEEEEECCCCceeEEEecc-Cce-EE
Confidence 6788899999999999999988886 344553332222 11 2677788888888777766654 33211 100 11
Q ss_pred CceeecCCeeeeeceeeeEEEEecccccEEec
Q 004442 129 MPYISKDGGVTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
.-.++.||.+..|+...++...|.++|+.+..
T Consensus 271 ~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 271 SVDCMSNGDIIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EEEECTTSCEEEEETTSCEEEEESCGGGCCC-
T ss_pred EEEEccCCCEEEEeCCCcEEEEeCCCCceeeh
Confidence 22356777777788888888888888877665
No 384
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=81.35 E-value=1.1 Score=48.93 Aligned_cols=36 Identities=8% Similarity=-0.130 Sum_probs=16.9
Q ss_pred ccccccCCccccccc-cccCC-CcccceeecCcccccc
Q 004442 265 ESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWI 300 (753)
Q Consensus 265 ~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~I 300 (753)
+.+.+.+|++++.+| .+.++ .|+.|++++|+++|.+
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 119 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAV 119 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHH
T ss_pred CEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccc
Confidence 444444555544443 24444 4555555555555443
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=80.99 E-value=0.71 Score=43.12 Aligned_cols=37 Identities=8% Similarity=0.010 Sum_probs=25.0
Q ss_pred ccccccccCCccccccccccC-C-CcccceeecCccccc
Q 004442 263 DVESHLPCHTQMTASVYRLRD-N-SLPEFLSVIGKVAGW 299 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~-l-~L~~LnlsnN~fsG~ 299 (753)
.++.+.+.+|++++.+|.+.. + .|+.|++++|++++.
T Consensus 72 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 110 (168)
T 2ell_A 72 KLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDI 110 (168)
T ss_dssp SCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSS
T ss_pred CCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcc
Confidence 346667777777777664332 5 577778888877773
No 386
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=80.88 E-value=2.7 Score=42.91 Aligned_cols=108 Identities=22% Similarity=0.252 Sum_probs=57.8
Q ss_pred eeEEE-ecCceEEEEeccCCeeeEEecCCC-C---cccccccCCCCCCceeeeccCC-----------CceeeeeccccC
Q 004442 50 VALVA-ALDGTIHLVDTKLGKIRWSFGTGR-P---IYSSYQASFNSNASEFYLDVDE-----------DWELYFHSKRFG 113 (753)
Q Consensus 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 113 (753)
.++++ ..+|+|+++|..+++..+.+..+. | -...+......|-...|....+ +-.+++-+-..|
T Consensus 56 ~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 56 TAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred EEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 34444 468999999999999998887543 1 0000111111222222222211 245555444443
Q ss_pred ceeeeccCHHHHHHhCce---eecCCeeeeeceeeeEEEEecccccEEecc
Q 004442 114 KMKKLSSSAEEYIRRMPY---ISKDGGVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
++.+.-.+.+ ....+. ++.||.+..++.. ++.+|.++|+++...
T Consensus 136 ~~~~~~~~~~--~~~~~~~~~~s~dg~l~~~~~~--i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 136 LEAKPVRTFP--MPRQVYLMRAADDGSLYVAGPD--IYKMDVKTGKYTVAL 182 (349)
T ss_dssp GGBCCSEEEE--CCSSCCCEEECTTSCEEEESSS--EEEECTTTCCEEEEE
T ss_pred cccceeeecc--CCCcccceeECCCCcEEEccCc--EEEEeCCCCceeccc
Confidence 3221100000 011345 8899988887654 889999999998863
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=80.76 E-value=0.7 Score=43.70 Aligned_cols=36 Identities=6% Similarity=-0.047 Sum_probs=22.6
Q ss_pred ccccccccCCccccccccccCC-CcccceeecCccccc
Q 004442 263 DVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGW 299 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~ 299 (753)
.++.+.+.+|++++- +.+..+ .|+.|++++|++++.
T Consensus 43 ~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~ 79 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRI 79 (176)
T ss_dssp CCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEE
T ss_pred CCCEEECCCCCCCcc-cccccCCCCCEEECCCCccccc
Confidence 456666666766653 555555 566677777777654
No 388
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=80.76 E-value=7.2 Score=41.82 Aligned_cols=27 Identities=7% Similarity=0.075 Sum_probs=21.4
Q ss_pred cCCeeeeeceeeeEEEEecccccEEec
Q 004442 134 KDGGVTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
+...+..|+...++...|.++|+.++.
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 344577788888888889999988887
No 389
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=80.61 E-value=2.3 Score=46.81 Aligned_cols=112 Identities=12% Similarity=0.055 Sum_probs=66.2
Q ss_pred CCCCeeEEEecC-----ceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeecc---------CCCceeeeeccc
Q 004442 46 PEPDVALVAALD-----GTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDV---------DEDWELYFHSKR 111 (753)
Q Consensus 46 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 111 (753)
+.++.+.|++.. |+|+++|..++++.+.+.+|.-- . .+- ..|...-|... +.+-.+.+=+..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-g--ia~-SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-H--PVA-AEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-E--EEE-CTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-c--eEE-CCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 556777777764 79999999999999999998622 1 111 11222222322 123344444555
Q ss_pred cCcee-eeccC-HHHH----HHhCceeecCC-eeeeece--eeeEEEEecccccEEecc
Q 004442 112 FGKMK-KLSSS-AEEY----IRRMPYISKDG-GVTLGAM--KTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 112 ~~~~~-~~~~~-~~~~----~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~ 161 (753)
.+++. ++.+. ...+ --..=.+|.|| .+++... ..++..||.+|++++...
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I 216 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRML 216 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEE
Confidence 55554 33321 0000 00122577788 5777654 468899999999999874
No 390
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=80.39 E-value=2.4 Score=42.91 Aligned_cols=42 Identities=7% Similarity=-0.163 Sum_probs=19.7
Q ss_pred cccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCC
Q 004442 264 VESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
|+.+.+.+|++++-.+. +..+ .|+.|++++|++++..|..+.
T Consensus 135 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 178 (270)
T 2o6q_A 135 LTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFD 178 (270)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred CCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhc
Confidence 34445555555543321 3444 455555555555554443333
No 391
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=80.19 E-value=1.4 Score=46.98 Aligned_cols=49 Identities=8% Similarity=-0.108 Sum_probs=29.6
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|+|++-.+ .+.++ .|+.|+|++|++++..|..+..+..|.
T Consensus 89 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 139 (361)
T 2xot_A 89 NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQ 139 (361)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCC
Confidence 34666666777665443 35555 577777777777766666555544443
No 392
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=80.09 E-value=1.7 Score=44.28 Aligned_cols=49 Identities=14% Similarity=0.080 Sum_probs=33.1
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++++-.+ .+..+ .|+.|++++|++++.+|..+.....|.
T Consensus 154 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 204 (285)
T 1ozn_A 154 NLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLM 204 (285)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCccccc
Confidence 45666777777775444 36666 677788888888887777766555544
No 393
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=79.94 E-value=4.3 Score=41.13 Aligned_cols=110 Identities=14% Similarity=0.220 Sum_probs=66.9
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 124 (753)
..+..+.++.||+|.++|..+++....|.. ..|+.+....+ +. -+.+.+..|..+++-+-+.++.. .+. ....
T Consensus 118 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~ 192 (312)
T 4ery_A 118 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DG---SLIVSSSYDGLCRIWDTASGQCLKTLI-DDDN 192 (312)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TS---SEEEEEETTSCEEEEETTTCCEEEEEC-CSSC
T ss_pred CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC-CC---CEEEEEeCCCcEEEEECCCCceeeEEe-ccCC
Confidence 456778889999999999999998888865 34553322211 11 13556667777766665555433 211 0000
Q ss_pred HHHhCceeecCCe-eeeeceeeeEEEEecccccEEecc
Q 004442 125 YIRRMPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 125 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
-.-..-.++.||. +..|+...++...|..+|+.++.+
T Consensus 193 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 193 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp CCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 0000012344553 566777778888999999988874
No 394
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=79.84 E-value=9.6 Score=38.22 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=58.2
Q ss_pred CCCeeEEEecCceEEEEeccCCe--eeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGK--IRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSA 122 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 122 (753)
..+..++++.||+|+++|..+++ ....+.. ..++.+.-..+ +. -+.+.+.+|..+++-+-+.++.. .+.- -
T Consensus 108 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~---~~l~~~~~dg~v~~~d~~~~~~~~~~~~-~ 182 (337)
T 1gxr_A 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DS---KVCFSCCSDGNIAVWDLHNQTLVRQFQG-H 182 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TS---SEEEEEETTSCEEEEETTTTEEEEEECC-C
T ss_pred CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-CC---CEEEEEeCCCcEEEEeCCCCceeeeeec-c
Confidence 34567788899999999998776 4444433 22332211111 11 12333444555554444333322 1110 0
Q ss_pred HHHHHhCceeecCC-eeeeeceeeeEEEEecccccEEecccC
Q 004442 123 EEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (753)
Q Consensus 123 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (753)
..-+ ..-.++.|| .+..|+...++...|.++|+.+....+
T Consensus 183 ~~~i-~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 223 (337)
T 1gxr_A 183 TDGA-SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF 223 (337)
T ss_dssp SSCE-EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cCce-EEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC
Confidence 0000 011233344 577788888899999999998887544
No 395
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=79.52 E-value=2 Score=47.02 Aligned_cols=43 Identities=9% Similarity=-0.058 Sum_probs=22.7
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCC
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
.|+.+.+.+|++++..+ .+.++ .|+.|||++|++++..+..+.
T Consensus 243 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 243 SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred CCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 34555555666665543 34444 466666666666654444433
No 396
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=79.52 E-value=0.85 Score=43.08 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=27.8
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccccc-cCC-CcccceeecCccc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRL-RDN-SLPEFLSVIGKVA 297 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~l-~~l-~L~~LnlsnN~fs 297 (753)
+++|.+.+...++.. ..++.+.+.+|++++-.+.+ ..+ .|+.|++++|+++
T Consensus 49 Ls~N~l~~~~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 101 (176)
T 1a9n_A 49 FSDNEIRKLDGFPLL--RRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101 (176)
T ss_dssp CCSSCCCEECCCCCC--SSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC
T ss_pred CCCCCCCcccccccC--CCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC
Confidence 455555544333322 23466666677776533332 455 5777777777773
No 397
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=79.31 E-value=5.6 Score=39.61 Aligned_cols=107 Identities=12% Similarity=0.123 Sum_probs=67.3
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEec--CCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCH
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFG--TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSA 122 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 122 (753)
+..+..++++.||+|+++| .++....+. ...++.+....+. .. ++.+..|..+++-+-+.++.. .+.-.-
T Consensus 153 ~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~-~~----~~~~~~dg~i~i~d~~~~~~~~~~~~~~ 225 (313)
T 3odt_A 153 FSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDD-GH----FISCSNDGLIKLVDMHTGDVLRTYEGHE 225 (313)
T ss_dssp TTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEET-TE----EEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred CCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCC-Ce----EEEccCCCeEEEEECCchhhhhhhhcCC
Confidence 4678889999999999999 444444444 4445533222211 11 556677777777666655544 222100
Q ss_pred HHHHHhCceeecCCeeeeeceeeeEEEEecccccEEecc
Q 004442 123 EEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
..+ ..-.++.||.+..|+...++...|.++|+.+...
T Consensus 226 -~~i-~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 226 -SFV-YCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVI 262 (313)
T ss_dssp -SCE-EEEEECTTSCEEEEETTSEEEEECTTTCCEEEEE
T ss_pred -ceE-EEEEEecCCCEEEEecCCEEEEEECCCCceeEEE
Confidence 000 1123566788888999999999999999988874
No 398
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=78.45 E-value=0.76 Score=44.33 Aligned_cols=44 Identities=14% Similarity=-0.099 Sum_probs=23.8
Q ss_pred cccccccCCcccccc-ccccCC-CcccceeecCccccccCCCCCCC
Q 004442 264 VESHLPCHTQMTASV-YRLRDN-SLPEFLSVIGKVAGWISLPGSSQ 307 (753)
Q Consensus 264 ~~~~l~~nN~ftGsI-p~l~~l-~L~~LnlsnN~fsG~IP~~l~s~ 307 (753)
|+.+.+.+|++++.. ..+..+ .|+.|++++|++++.+|..+..+
T Consensus 90 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l 135 (197)
T 4ezg_A 90 LERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTL 135 (197)
T ss_dssp CCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTC
T ss_pred CCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhC
Confidence 455555566666533 245555 46666666666666555444433
No 399
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=78.41 E-value=12 Score=37.49 Aligned_cols=102 Identities=8% Similarity=0.113 Sum_probs=61.5
Q ss_pred EEEecCceEEEEeccCCeeeEEecCCC------CcccccccCCCCCC-ceeeeccC----------CCceeeeeccccCc
Q 004442 52 LVAALDGTIHLVDTKLGKIRWSFGTGR------PIYSSYQASFNSNA-SEFYLDVD----------EDWELYFHSKRFGK 114 (753)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~~ 114 (753)
+.+..||+|+++|..+++..+.+..+. ..++ . ....|. .+|..+.. .+..+++-+...++
T Consensus 50 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~ 126 (337)
T 1pby_B 50 ATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFG--A-ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126 (337)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTC--E-EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred EEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccc--e-EECCCCCEEEEEecccccccccccccCceEEEEECCCCc
Confidence 334457899999999999998887653 1111 1 111222 24444311 35677776666665
Q ss_pred ee-eeccCHHHHHHhCceeecCCe-eeeeceeeeEEEEecccccEEecc
Q 004442 115 MK-KLSSSAEEYIRRMPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 115 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
+. .+.. +.- -....++.||. +.+++ .+++.+|.++|++++..
T Consensus 127 ~~~~~~~--~~~-~~~~~~s~dg~~l~~~~--~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 127 RRKAFEA--PRQ-ITMLAWARDGSKLYGLG--RDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp EEEEEEC--CSS-CCCEEECTTSSCEEEES--SSEEEEETTTTEEEEEE
T ss_pred EEEEEeC--CCC-cceeEECCCCCEEEEeC--CeEEEEECCCCcEeeee
Confidence 54 3331 111 13345788886 66663 56889999999998773
No 400
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=78.40 E-value=2.2 Score=45.34 Aligned_cols=47 Identities=11% Similarity=-0.030 Sum_probs=26.8
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCC
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNS 309 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~ 309 (753)
.|+.+.+.+|++++-.+ .+.++ .|+.|||++|++++..+..+..+.+
T Consensus 65 ~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 113 (361)
T 2xot_A 65 NLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQA 113 (361)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred ccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcC
Confidence 34556666666665543 35555 5666666666666655544444433
No 401
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=78.37 E-value=2.6 Score=43.96 Aligned_cols=42 Identities=14% Similarity=-0.082 Sum_probs=19.7
Q ss_pred ccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCC
Q 004442 265 ESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQ 307 (753)
Q Consensus 265 ~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~ 307 (753)
+.+.+.+|++++..+ .+..+ .|+.|++++|+++ .||..+...
T Consensus 220 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 220 YRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp SCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred CEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 444444555554443 23444 4555555555555 444444333
No 402
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=78.36 E-value=0.82 Score=55.20 Aligned_cols=25 Identities=4% Similarity=-0.308 Sum_probs=12.9
Q ss_pred CcccceeecCccccccCCCCCCCCC
Q 004442 285 SLPEFLSVIGKVAGWISLPGSSQNS 309 (753)
Q Consensus 285 ~L~~LnlsnN~fsG~IP~~l~s~n~ 309 (753)
.|+.|+|++|+++|.||..+..+..
T Consensus 492 ~L~~L~Ls~N~l~~~iP~~l~~L~~ 516 (876)
T 4ecn_A 492 DLTDVELYNCPNMTQLPDFLYDLPE 516 (876)
T ss_dssp TCCEEEEESCTTCCSCCGGGGGCSS
T ss_pred CCCEEECcCCCCCccChHHHhCCCC
Confidence 4555555555555555544444333
No 403
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=78.13 E-value=6.1 Score=41.88 Aligned_cols=112 Identities=17% Similarity=0.136 Sum_probs=56.2
Q ss_pred CCCeeEEEe--cCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCceeeec-cCHH
Q 004442 47 EPDVALVAA--LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLS-SSAE 123 (753)
Q Consensus 47 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 123 (753)
.+.++..+. .||+|+++|..+++..+.+..+.++.+.--.+ +.. .+....+.+|..+++-+-..+++.... +...
T Consensus 271 ~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~-~~~-~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h 348 (401)
T 4aez_A 271 QSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSP-HSK-EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH 348 (401)
T ss_dssp STTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECS-SSS-EEEEEECTTTCEEEEEEEETTEEEEEEEEECC
T ss_pred CCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECC-CCC-eEEEEeecCCCcEEEEecCCccceeEEEecCC
Confidence 344545444 79999999999999999999988874322211 111 011111335555555444444333211 0000
Q ss_pred HHHHhCceeecCCe-eeeeceeeeEEEEecccccEEec
Q 004442 124 EYIRRMPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 124 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
+---..-.++.||. +..|+...++...|..+|+.+..
T Consensus 349 ~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 349 DTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp SSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 00000112344553 55677777788888888887765
No 404
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=78.12 E-value=1.5 Score=45.66 Aligned_cols=34 Identities=3% Similarity=-0.084 Sum_probs=15.6
Q ss_pred cccccccCCccccccccccCC-CcccceeecCccc
Q 004442 264 VESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVA 297 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fs 297 (753)
++.+.+.+|++++-.+.+..+ .|+.|++++|+++
T Consensus 193 L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 193 LKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred CCEEECCCCcCCcchhhhcccCcccEEECcCCccc
Confidence 344444455554433333333 3445555555554
No 405
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=77.87 E-value=2.2 Score=45.02 Aligned_cols=113 Identities=14% Similarity=0.014 Sum_probs=58.6
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEecC---CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccC
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGT---GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSS 121 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 121 (753)
..+.+++.+..||+|.++|..++++.-.+.. ..++.+---.|.+.. +...+.+|..+++-+-+.++.. .+.-.
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~---~la~g~~d~~i~~wd~~~~~~~~~~~~~ 268 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD---TFACGDETGNVSLVNIKNPDSAQTSAVH 268 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT---EEEEEESSSCEEEEESSCGGGCEEECCC
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc---eEEEeecccceeEEECCCCcEeEEEecc
Confidence 3445778888999999999887766544322 122212111111111 2223444554544433333322 12100
Q ss_pred HHHHHHhCceeecCCe--eeeeceeeeEEEEecccccEEecccC
Q 004442 122 AEEYIRRMPYISKDGG--VTLGAMKTSVFLVDVKSGRVVDNYVL 163 (753)
Q Consensus 122 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (753)
-. -|. .=.++.||. |..|+..-++..-|.++|++++...|
T Consensus 269 ~~-~v~-~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H 310 (357)
T 4g56_B 269 SQ-NIT-GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSH 310 (357)
T ss_dssp SS-CEE-EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCC
T ss_pred ce-eEE-EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCC
Confidence 00 000 012344553 55688878888899999999987655
No 406
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=77.37 E-value=3 Score=42.92 Aligned_cols=48 Identities=6% Similarity=-0.046 Sum_probs=29.0
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCC
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSL 310 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l 310 (753)
.|+.+.+.+|++++-.+ .+..+ .|+.|++++|++++..+..+..+..|
T Consensus 125 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L 174 (290)
T 1p9a_G 125 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENL 174 (290)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTC
T ss_pred CCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCC
Confidence 45667777777775443 24555 57778888888775444444434333
No 407
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=77.33 E-value=4.2 Score=42.94 Aligned_cols=109 Identities=17% Similarity=0.122 Sum_probs=60.4
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCC----Ccccccc------------------cCCCCCCceeeeccCCCce
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGR----PIYSSYQ------------------ASFNSNASEFYLDVDEDWE 104 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------------------~~~~~~~~~~~~~~~~~~~ 104 (753)
..+..+.++.||+|.++|..+++..+.|.... ++.+.-. .....| .-+.+.+..|..
T Consensus 192 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~ 270 (420)
T 3vl1_A 192 RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY-GKYVIAGHVSGV 270 (420)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT-TEEEEEEETTSC
T ss_pred CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC-CCEEEEEcCCCe
Confidence 44567889999999999999999999997532 1110000 000011 123444556666
Q ss_pred eeeeccccCcee-eeccCHHHHHHhCceeecCC--eeeeeceeeeEEEEecccccE
Q 004442 105 LYFHSKRFGKMK-KLSSSAEEYIRRMPYISKDG--GVTLGAMKTSVFLVDVKSGRV 157 (753)
Q Consensus 105 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 157 (753)
+++-+-+.++.. .+. .-..---..-.++.+| .+..|+...++...|.++|+.
T Consensus 271 i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 271 ITVHNVFSKEQTIQLP-SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp EEEEETTTCCEEEEEC-CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred EEEEECCCCceeEEcc-cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 665555544432 211 1000000112345566 477888888888888888753
No 408
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=77.03 E-value=1.8 Score=47.93 Aligned_cols=42 Identities=10% Similarity=-0.085 Sum_probs=29.5
Q ss_pred cccccccccCCccccccccccCC-CcccceeecCccccccCCCCC
Q 004442 262 GDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
..++.+.+.+|++++ ||.+.++ .|+.|++++|+++| ||..+.
T Consensus 131 ~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~-lp~~~~ 173 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNNSLKK-LPDLPP 173 (454)
T ss_dssp TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSC-CCCCCT
T ss_pred CCCCEEECcCCCCCC-CcccCCCCCCCEEECCCCcCcc-cCCCcc
Confidence 356777777788876 7777776 67778888888876 555443
No 409
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=76.96 E-value=2 Score=43.56 Aligned_cols=51 Identities=6% Similarity=-0.047 Sum_probs=30.0
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccccccCC-CcccceeecCccccc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGW 299 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~ 299 (753)
+++|.+.+...+.. ..|+.+.+.+|++++ ++.+..+ .|+.||+++|++++.
T Consensus 92 L~~N~l~~l~~~~~---~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 92 VNRNRLKNLNGIPS---ACLSRLFLDNNELRD-TDSLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp CCSSCCSCCTTCCC---SSCCEEECCSSCCSB-SGGGTTCTTCCEEECTTSCCCBC
T ss_pred CCCCccCCcCcccc---CcccEEEccCCccCC-ChhhcCcccccEEECCCCcCCCC
Confidence 44444444333333 345666667777766 4556666 577777777777763
No 410
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=76.77 E-value=0.96 Score=50.11 Aligned_cols=56 Identities=11% Similarity=-0.013 Sum_probs=39.6
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccccccCC-CcccceeecCcccc--ccCCCCCCC
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAG--WISLPGSSQ 307 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG--~IP~~l~s~ 307 (753)
+++|.+.+ ++.. ...++.+.+.+|+++ +||. .+ .|+.|++++|+++| .||..+..+
T Consensus 324 Ls~N~l~~---lp~~-~~~L~~L~L~~N~l~-~lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~~L 382 (454)
T 1jl5_A 324 VSNNKLIE---LPAL-PPRLERLIASFNHLA-EVPE--LPQNLKQLHVEYNPLREFPDIPESVEDL 382 (454)
T ss_dssp CCSSCCSC---CCCC-CTTCCEEECCSSCCS-CCCC--CCTTCCEEECCSSCCSSCCCCCTTCCEE
T ss_pred CCCCcccc---cccc-CCcCCEEECCCCccc-cccc--hhhhccEEECCCCCCCcCCCChHHHHhh
Confidence 45566553 2211 245778888899998 5876 34 79999999999999 888877543
No 411
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=76.64 E-value=5.4 Score=42.30 Aligned_cols=110 Identities=11% Similarity=0.084 Sum_probs=67.9
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 124 (753)
...+.+.+..||+|+++|..+++..+.+.. +.+..+-- .+.|....|..+.+|..+++-+...|++. .+... .
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~ 254 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILL---YDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI--G 254 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEE---EETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC--S
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEE---EcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC--C
Confidence 345556667889999999999999998863 32331211 12233344556667778888777666654 22211 0
Q ss_pred HHHhCceeecCC-eeeeece--------eeeEEEEecccccEEeccc
Q 004442 125 YIRRMPYISKDG-GVTLGAM--------KTSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 125 ~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 162 (753)
- -..-.++.|| .+..++. ..+++..|..+|+++....
T Consensus 255 ~-~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~ 300 (433)
T 3bws_A 255 L-PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG 300 (433)
T ss_dssp E-EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE
T ss_pred C-ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc
Confidence 0 1223456677 5666663 4588899999998887743
No 412
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=76.58 E-value=3.4 Score=43.25 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=68.4
Q ss_pred CCCeeEEEecCceEEEEeccC----CeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eec--
Q 004442 47 EPDVALVAALDGTIHLVDTKL----GKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLS-- 119 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 119 (753)
.+.+++.+..||+|.++|..+ +.....+....++.+--..+.+.+ +.+.+..|..+++-+-+.++.. .+.
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 292 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDST---KLLTTDQRNEIRVYSSYDWSKPDQIIIH 292 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSC---EEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCC---EEEEEcCCCcEEEEECCCCccccccccc
Confidence 334788899999999999977 777777776666644333221221 3455666777766655444331 111
Q ss_pred --------------cCH-HHHHHhCceeecCCeeeeeceeeeEEEEecccccEEecc
Q 004442 120 --------------SSA-EEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 120 --------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
|+. .+++ .-.++.||.+ .|+...++...|.++|+.++..
T Consensus 293 ~~~~~~~~~~~~~~~~p~~~~~--~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 293 PHRQFQHLTPIKATWHPMYDLI--VAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp CBCCCTTSCCCCCEECSSSSEE--EEECBCCTTT-CTTCCCCEEEEETTTCCEEEEE
T ss_pred cccccccccceEEeccCCCCce--EEEecCCccc-ccCCCCeEEEEecCCCceeeee
Confidence 100 0000 0124567777 8888999999999999998883
No 413
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=76.56 E-value=1.9 Score=44.36 Aligned_cols=49 Identities=10% Similarity=-0.079 Sum_probs=32.1
Q ss_pred ccccccccCCcccc-ccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTA-SVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftG-sIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++++ .+| .+..+ .|+.|++++|++++..|..+.....|.
T Consensus 151 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 45666777777777 334 35555 677788888888777776665554444
No 414
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=76.33 E-value=16 Score=39.01 Aligned_cols=110 Identities=14% Similarity=0.095 Sum_probs=65.9
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 124 (753)
..+..++++.||+|.++|..+++....|.. ..++++.--.+ +. -+.+.+..|..+++-+-+.|+.. .+.-. .+
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~~ 353 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH-ER---KRCISASMDTTIRIWDLENGELMYTLQGH-TA 353 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-TT---TEEEEEETTSCEEEEETTTTEEEEEECCC-SS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcC-CC---CEEEEEeCCCcEEEEECCCCcEEEEEeCC-CC
Confidence 457788999999999999999999999863 34443322211 11 12455566666666555555433 22100 00
Q ss_pred HHHhCceeecCCeeeeeceeeeEEEEecccccEEecccC
Q 004442 125 YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (753)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (753)
.|.. =.+ ++..+..|+...++..-|..++.......+
T Consensus 354 ~v~~-~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 390 (464)
T 3v7d_B 354 LVGL-LRL-SDKFLVSAAADGSIRGWDANDYSRKFSYHH 390 (464)
T ss_dssp CEEE-EEE-CSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cEEE-EEE-cCCEEEEEeCCCcEEEEECCCCceeeeecC
Confidence 0000 001 134577778778888899999887776544
No 415
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=76.32 E-value=3.4 Score=42.96 Aligned_cols=42 Identities=12% Similarity=-0.024 Sum_probs=19.6
Q ss_pred ccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCC
Q 004442 265 ESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQ 307 (753)
Q Consensus 265 ~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~ 307 (753)
+.+.+.+|++++..+ .+..+ .|+.|++++|+++ .||..+...
T Consensus 219 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 262 (330)
T 1xku_A 219 AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262 (330)
T ss_dssp CEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTC
T ss_pred CEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccC
Confidence 444444555554443 34444 4555555555555 444444333
No 416
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=76.30 E-value=9.6 Score=38.73 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=31.3
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccc
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSS 83 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (753)
..+..++++.||+|+++|..+++..+.+..+.++.+.
T Consensus 85 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~ 121 (369)
T 3zwl_B 85 FTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRV 121 (369)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEE
Confidence 4567788899999999999999999999988887443
No 417
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=76.12 E-value=2.2 Score=48.18 Aligned_cols=48 Identities=6% Similarity=-0.209 Sum_probs=25.6
Q ss_pred ccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCC
Q 004442 259 DLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSS 306 (753)
Q Consensus 259 ~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s 306 (753)
.++.+++.+.+.+|++++-.+ .+.++ .|+.|||++|++++-.|..+..
T Consensus 49 ~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~ 98 (635)
T 4g8a_A 49 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS 98 (635)
T ss_dssp SSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred CCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcC
Confidence 344455566666666654333 35555 4666666666666544444433
No 418
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=76.07 E-value=3 Score=43.32 Aligned_cols=56 Identities=13% Similarity=0.007 Sum_probs=44.1
Q ss_pred CccccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 256 LGMDLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 256 l~~~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
++......++.+.+.+|++++..+ .+.++ .|+.|++++|++++..|..+.....|.
T Consensus 46 lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (330)
T 1xku_A 46 VPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103 (330)
T ss_dssp CCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred cCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCC
Confidence 333344567888899999998765 57777 799999999999998898887766655
No 419
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=75.94 E-value=4.5 Score=41.22 Aligned_cols=110 Identities=10% Similarity=0.157 Sum_probs=61.3
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCC--ccc-ccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP--IYS-SYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSA 122 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 122 (753)
.+...+.+..||+|.++|..+++....+..+.. +.. .+...++ .-+.+.+++|..+.+-+-+.++.. .+.---
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~ 228 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD---KPYMITASDDLTIKIWDYQTKSCVATLEGHM 228 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTT---CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCC---CCEEEEEcCCCeEEEEeCCCCccceeeCCCC
Confidence 456788899999999999988777777765542 211 1111011 113345555555554443333322 111000
Q ss_pred HHHHHhCceeecCC-eeeeeceeeeEEEEecccccEEecc
Q 004442 123 EEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 123 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
.-|. .=.++.+| .+..|+..-++..-|.+||+++++.
T Consensus 229 -~~v~-~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 229 -SNVS-FAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp -SCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred -CCEE-EEEECCCCCEEEEEcCCCeEEEEECCCCceeeec
Confidence 0000 00123344 4667888888889999999998874
No 420
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=75.81 E-value=1.7 Score=44.93 Aligned_cols=49 Identities=8% Similarity=-0.086 Sum_probs=33.5
Q ss_pred ccccccccCCccccccccc-----cCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYRL-----RDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l-----~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++++.++.+ ..+ .|+.|++++|++++..|..+..+..|.
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 4577777788888765422 224 688888888888777777666555544
No 421
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=75.48 E-value=2.4 Score=47.58 Aligned_cols=67 Identities=10% Similarity=-0.082 Sum_probs=46.1
Q ss_pred CCCcccccCCCCccccccccccccccCCccc-cccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMT-ASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ft-GsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
++++.+....+-.-.....++.+.+.+|+++ |.+| .+..+ .|+.|++++|++++.+|..+....+|.
T Consensus 428 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 4555554332211112235678888899998 6776 46666 799999999999999898887666655
No 422
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=75.33 E-value=13 Score=37.42 Aligned_cols=109 Identities=15% Similarity=0.186 Sum_probs=62.4
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEecCC-CCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHH
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTG-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 123 (753)
|..+..+.+..||+|.++|..+++....+... .++.+.-..+ + .-+.+.+..|..+++-+-+.++.. .+.-. .
T Consensus 75 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~---~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~ 149 (312)
T 4ery_A 75 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP---Q-SNLIVSGSFDESVRIWDVKTGKCLKTLPAH-S 149 (312)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS---S-SSEEEEEETTSCEEEEETTTCCEEEEECCC-S
T ss_pred CCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC---C-CCEEEEEeCCCcEEEEECCCCEEEEEecCC-C
Confidence 34567788899999999999998887777532 2332211111 1 113445556666665555544432 22110 0
Q ss_pred HHHHhCceeecCC-eeeeeceeeeEEEEecccccEEec
Q 004442 124 EYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 124 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
+-| ..-.++.|| .+..|+...++...|.++|+.+..
T Consensus 150 ~~v-~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 150 DPV-SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 186 (312)
T ss_dssp SCE-EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CcE-EEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeE
Confidence 000 001233454 466788788888899999988776
No 423
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=75.04 E-value=5 Score=42.61 Aligned_cols=109 Identities=11% Similarity=0.031 Sum_probs=66.8
Q ss_pred eeEEEe-cCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccC-------CCceeeeeccccCceeeeccC
Q 004442 50 VALVAA-LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVD-------EDWELYFHSKRFGKMKKLSSS 121 (753)
Q Consensus 50 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 121 (753)
..++++ .||+|+++|..+++..+.+..+....+.-.. .|....|.... +|..||+-+...|++...- .
T Consensus 225 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~---~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~ 300 (433)
T 3bws_A 225 LVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLS---KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-G 300 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEEC---TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-E
T ss_pred EEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEc---CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-c
Confidence 344455 7999999999999999999877654222211 12222222221 4667777776666655321 1
Q ss_pred HHHHHHhCceeecCCe-e-eeeceeeeEEEEecccccEEecccC
Q 004442 122 AEEYIRRMPYISKDGG-V-TLGAMKTSVFLVDVKSGRVVDNYVL 163 (753)
Q Consensus 122 ~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (753)
.+. --....++.||. + ..++...++...|.++|+++....+
T Consensus 301 ~~~-~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~ 343 (433)
T 3bws_A 301 PPG-NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV 343 (433)
T ss_dssp EEE-CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCC-CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC
Confidence 111 112345677773 4 5557788899999999999887533
No 424
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=74.84 E-value=2.1 Score=49.45 Aligned_cols=36 Identities=14% Similarity=0.054 Sum_probs=17.6
Q ss_pred ccccccCCccccccccccCC-CcccceeecCccccccC
Q 004442 265 ESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWIS 301 (753)
Q Consensus 265 ~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP 301 (753)
+.+.+.+|++++. +.+..+ .|+.|+|++|++++.+|
T Consensus 134 ~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 134 ESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh
Confidence 4444455555543 444444 45555555555555444
No 425
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=74.81 E-value=2.3 Score=42.94 Aligned_cols=43 Identities=2% Similarity=-0.238 Sum_probs=19.8
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCC
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
+++.+.+.+|++++..+ .+.++ .|+.|++++|++++..+..+.
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 73 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ 73 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHcc
Confidence 34444455555544333 34444 355555555555544443333
No 426
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=74.76 E-value=13 Score=39.22 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=61.1
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccc------------cC
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKR------------FG 113 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 113 (753)
..+..++++.||+|.++|..+++....+.. ..++.+. . .+.+ +.+.++.|..+++.+-+ .+
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~-~--~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 218 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCL-S--WNRH---VLSSGSRSGAIHHHDVRIANHQIGTLQGHSS 218 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE-E--EETT---EEEEEETTSEEEEEETTSSSCEEEEEECCSS
T ss_pred CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEE-E--ECCC---EEEEEcCCCCEEEEecccCcceeeEEcCCCC
Confidence 456778888999999999999888888853 2333211 0 0111 34455555555555544 33
Q ss_pred ceeeeccCHHHHHHhCceeecCC-eeeeeceeeeEEEEecccccEEec
Q 004442 114 KMKKLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
.|..+.| +.|| .+..|+...++...|.++|+.+..
T Consensus 219 ~v~~~~~------------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 219 EVCGLAW------------RSDGLQLASGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp CEEEEEE------------CTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred CeeEEEE------------cCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence 3333333 3343 477788888899999999998877
No 427
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=74.57 E-value=4.4 Score=41.63 Aligned_cols=49 Identities=12% Similarity=-0.039 Sum_probs=35.4
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.++.+.+.+|++++-.+ .+.++ .|+.|++++|++++..|..+.....|.
T Consensus 101 ~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 151 (290)
T 1p9a_G 101 ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151 (290)
T ss_dssp TCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred CCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCC
Confidence 45777888899887664 47777 789999999999876665555444443
No 428
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=74.52 E-value=2.6 Score=43.74 Aligned_cols=42 Identities=5% Similarity=-0.096 Sum_probs=30.8
Q ss_pred ccccccccCCccccccc--cccCC-CcccceeecCccccccCCCCC
Q 004442 263 DVESHLPCHTQMTASVY--RLRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp--~l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
.|+.+.+.+|+++|.+| .+..+ .|+.||+++|+++ .||..+.
T Consensus 229 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 229 QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 56777788888888763 44555 6888888888888 7776664
No 429
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=74.52 E-value=7.6 Score=44.57 Aligned_cols=106 Identities=16% Similarity=0.173 Sum_probs=63.0
Q ss_pred eEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeecccc-----CceeeeccCHHHH
Q 004442 51 ALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRF-----GKMKKLSSSAEEY 125 (753)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 125 (753)
.++++.||+|+++|..+|+..--...+.++.+- .-+++. ..+.|. .|..||+.+-.. |+...+...-.+-
T Consensus 94 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~-~~SpdG-~~la~~---~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~ 168 (706)
T 2z3z_A 94 LVVLFTQGGLVGFDMLARKVTYLFDTNEETASL-DFSPVG-DRVAYV---RNHNLYIARGGKLGEGMSRAIAVTIDGTET 168 (706)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEECCTTCCTTC-EECTTS-SEEEEE---ETTEEEEEECBCTTSCCCCCEESCSCCBTT
T ss_pred eEEEEECCEEEEEECCCCceEEccCCcccccCC-cCCCCC-CEEEEE---ECCeEEEEecCcccccCCCcEEeccCCCCC
Confidence 344557899999999888876655544433221 111111 125553 457788877666 6665443221111
Q ss_pred H-------------HhCceeecCCe-eeeec---------------------------------eeeeEEEEecccccEE
Q 004442 126 I-------------RRMPYISKDGG-VTLGA---------------------------------MKTSVFLVDVKSGRVV 158 (753)
Q Consensus 126 ~-------------~~~~~~~~~~~-~~~~~---------------------------------~~~~~~~~~~~~~~~~ 158 (753)
+ ...+.+|.||. |..++ ...+++.+|.++|+..
T Consensus 169 ~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~ 248 (706)
T 2z3z_A 169 LVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV 248 (706)
T ss_dssp EEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE
T ss_pred eEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE
Confidence 1 25677899995 33343 4578899999999876
Q ss_pred ecc
Q 004442 159 DNY 161 (753)
Q Consensus 159 ~~~ 161 (753)
...
T Consensus 249 ~~~ 251 (706)
T 2z3z_A 249 YLQ 251 (706)
T ss_dssp ECC
T ss_pred eec
Confidence 653
No 430
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=74.50 E-value=3.5 Score=46.14 Aligned_cols=50 Identities=10% Similarity=-0.041 Sum_probs=40.9
Q ss_pred cccccccccCCccccccc-cccCC-CcccceeecCccc-cccCCCCCCCCCCc
Q 004442 262 GDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVA-GWISLPGSSQNSLL 311 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fs-G~IP~~l~s~n~l~ 311 (753)
..++.+.+.+|++++.+| .+.++ .|+.|++++|+++ |.+|..+.....|.
T Consensus 421 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~ 473 (570)
T 2z63_A 421 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 473 (570)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred CCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCC
Confidence 356888888999999887 46667 7999999999998 78998887666655
No 431
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=74.42 E-value=3.4 Score=45.02 Aligned_cols=49 Identities=8% Similarity=0.009 Sum_probs=32.2
Q ss_pred ccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++++..| .+.++ .|+.|++++|++++..|..+....+|.
T Consensus 208 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 258 (440)
T 3zyj_A 208 KLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLV 258 (440)
T ss_dssp SCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCC
T ss_pred ccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCC
Confidence 34666677777777654 45566 677777777777777776665554444
No 432
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=74.41 E-value=2.1 Score=47.84 Aligned_cols=49 Identities=8% Similarity=-0.092 Sum_probs=28.8
Q ss_pred ccccccccCCcccccccc-ccCC-CcccceeecCcccc-ccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAG-WISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG-~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++++..|. +.++ .|+.||+++|++++ .+|..+.....|.
T Consensus 75 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 126 (549)
T 2z81_A 75 SLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126 (549)
T ss_dssp TCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCC
T ss_pred cCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCcc
Confidence 346666666666666653 5666 56667777777665 4555544444433
No 433
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=74.39 E-value=4.6 Score=41.58 Aligned_cols=17 Identities=18% Similarity=0.364 Sum_probs=8.2
Q ss_pred eeeEEEEecccccEEec
Q 004442 144 KTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 144 ~~~~~~~~~~~~~~~~~ 160 (753)
...+|.+|++||++...
T Consensus 309 ~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 309 NATLYARDLTSGKLSLL 325 (347)
T ss_dssp EEEEEEECTTTCCEEEE
T ss_pred cEEEEEEeCCCCeEEec
Confidence 34445555555554443
No 434
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=74.34 E-value=6.6 Score=41.47 Aligned_cols=106 Identities=21% Similarity=0.178 Sum_probs=64.3
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEec---CCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHH
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFG---TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 123 (753)
+++++.++.||+|.++|..+++....+. ...++.+---.+ +. -+.+.+..|..+++-+-+.++.. .+...-+
T Consensus 144 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 219 (402)
T 2aq5_A 144 QNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DG---ALICTSCRDKRVRVIEPRKGTVVAEKDRPHE 219 (402)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TS---SCEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred CCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CC---CEEEEEecCCcEEEEeCCCCceeeeeccCCC
Confidence 5688889999999999999999999983 334443332222 11 13556677777777776666654 2210111
Q ss_pred HHHHhCceeecCCe-eeee---ceeeeEEEEecccccE
Q 004442 124 EYIRRMPYISKDGG-VTLG---AMKTSVFLVDVKSGRV 157 (753)
Q Consensus 124 ~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~ 157 (753)
...-..-.++.||. ++.| +...++...|.++++.
T Consensus 220 ~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 220 GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 11011223445564 4556 5777788888888764
No 435
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=74.28 E-value=11 Score=40.28 Aligned_cols=115 Identities=14% Similarity=0.071 Sum_probs=62.3
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeecc-----------ccCce
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSK-----------RFGKM 115 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 115 (753)
..+..+.++.||+|.++|..+|...-.|.........-..++ | .-+.+.++.|..+.+-+- +.+.|
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~--~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v 279 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ--D-GTLIASCSNDQTVRVWVVATKECKAELREHRHVV 279 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT--T-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC--C-CCEEEEEcCCCeEEEEECCCCceeeEecCCCceE
Confidence 456788899999999999999888777753322111111011 1 112344444444443322 33344
Q ss_pred eeeccCHHHHH-HhCc-------eee-cCCeeeeeceeeeEEEEecccccEEec-ccCC
Q 004442 116 KKLSSSAEEYI-RRMP-------YIS-KDGGVTLGAMKTSVFLVDVKSGRVVDN-YVLD 164 (753)
Q Consensus 116 ~~~~~~~~~~~-~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 164 (753)
..+.|+...-. .... ... ....+..|+...++..-|.++|..+.+ ..|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 44454432110 0000 000 122467788888899999999999888 4443
No 436
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=74.24 E-value=2.2 Score=48.40 Aligned_cols=44 Identities=9% Similarity=0.090 Sum_probs=21.5
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCC
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQ 307 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~ 307 (753)
|+.+.+.+|++++..| .+.++ .|+.|++++|++++-.|..+...
T Consensus 83 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l 128 (606)
T 3t6q_A 83 LDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQ 128 (606)
T ss_dssp CCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTC
T ss_pred cCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccC
Confidence 3445555555555443 34444 45555555555555434444333
No 437
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=73.81 E-value=2.3 Score=43.19 Aligned_cols=52 Identities=10% Similarity=0.064 Sum_probs=30.5
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccccccCCCcccceeecCccccc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDNSLPEFLSVIGKVAGW 299 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~l~~l~L~~LnlsnN~fsG~ 299 (753)
+++|.+.+...++. ...|+.+.+.+|++++ +|.+....|+.|++++|++++.
T Consensus 70 L~~N~i~~~~~l~~--l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~~N~l~~~ 121 (263)
T 1xeu_A 70 LSHNQISDLSPLKD--LTKLEELSVNRNRLKN-LNGIPSACLSRLFLDNNELRDT 121 (263)
T ss_dssp CCSSCCCCCGGGTT--CSSCCEEECCSSCCSC-CTTCCCSSCCEEECCSSCCSBS
T ss_pred CCCCccCCChhhcc--CCCCCEEECCCCccCC-cCccccCcccEEEccCCccCCC
Confidence 45555554433322 2245667777777776 4444445677778888877773
No 438
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=73.74 E-value=2.8 Score=47.31 Aligned_cols=64 Identities=8% Similarity=-0.056 Sum_probs=49.1
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
++++.+.. ++......++.+.+.+|++++..| .+.++ .|+.|++++|++++-.|..+.....|.
T Consensus 38 ls~~~L~~---ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 103 (562)
T 3a79_B 38 YSNRNLTH---VPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLE 103 (562)
T ss_dssp CTTSCCCS---CCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCC
T ss_pred cCCCCCcc---CCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCC
Confidence 55556553 333444678899999999998775 68888 799999999999998888877666655
No 439
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=73.58 E-value=2.6 Score=44.43 Aligned_cols=76 Identities=20% Similarity=0.113 Sum_probs=49.8
Q ss_pred ceeeeecccCC-CCCCcccccCCCCccccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCC
Q 004442 233 KAEFRCQEVGK-SFSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNS 309 (753)
Q Consensus 233 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~ 309 (753)
.+...|...+. ..+++.+. +++......++.+.+.+|++++-.+ .+.++ .|+.|++++|++++..|..+.....
T Consensus 25 ~~~~~C~~~~~c~~~~~~l~---~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 101 (353)
T 2z80_A 25 QASLSCDRNGICKGSSGSLN---SIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGS 101 (353)
T ss_dssp --CCEECTTSEEECCSTTCS---SCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ccCCCCCCCeEeeCCCCCcc---cccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCC
Confidence 34455555432 23344443 2333344577888999999997554 57777 7999999999999988877766555
Q ss_pred Cc
Q 004442 310 LL 311 (753)
Q Consensus 310 l~ 311 (753)
|.
T Consensus 102 L~ 103 (353)
T 2z80_A 102 LE 103 (353)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 440
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=73.57 E-value=2 Score=47.30 Aligned_cols=46 Identities=15% Similarity=-0.048 Sum_probs=23.3
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCC
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNS 309 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~ 309 (753)
|+.+.+.+|++++..+ .+.++ .|+.|++++|++++..|..+.....
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 297 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 297 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTT
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCccc
Confidence 3455555555554433 24444 4555566666555555555444433
No 441
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=73.55 E-value=3.1 Score=47.95 Aligned_cols=47 Identities=11% Similarity=-0.035 Sum_probs=30.0
Q ss_pred ccccccccCCcccccccc-cc--CC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYR-LR--DN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~--~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|+++ .||. +. .+ .|+.|+|++|+++| ||..+.....|.
T Consensus 489 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~ 539 (636)
T 4eco_A 489 LLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLK 539 (636)
T ss_dssp GCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCC
T ss_pred CccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCC
Confidence 4566667777777 5653 32 44 57777777777777 776665544443
No 442
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=73.48 E-value=1.6 Score=48.58 Aligned_cols=35 Identities=6% Similarity=-0.025 Sum_probs=16.4
Q ss_pred cccccccCCcccc-ccc-cccCC-CcccceeecCcccc
Q 004442 264 VESHLPCHTQMTA-SVY-RLRDN-SLPEFLSVIGKVAG 298 (753)
Q Consensus 264 ~~~~l~~nN~ftG-sIp-~l~~l-~L~~LnlsnN~fsG 298 (753)
|+.+.+.+|++++ .+| .+.++ .|+.|++++|++++
T Consensus 92 L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 92 LKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred ccEEeccCCccccccchhhhccCCcceEEEecCcccch
Confidence 3444444555544 332 34444 45555555555544
No 443
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=73.45 E-value=1.9 Score=48.03 Aligned_cols=39 Identities=10% Similarity=-0.069 Sum_probs=26.6
Q ss_pred ccccccccCCccccccccccCC-CcccceeecCccccccCC
Q 004442 263 DVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISL 302 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~ 302 (753)
.|+.+.+.+|+++|.+| +..+ .|+.|||++|++++..+.
T Consensus 59 ~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~~ 98 (487)
T 3oja_A 59 KLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLVG 98 (487)
T ss_dssp TCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEEC
T ss_pred CCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCCC
Confidence 45667777777777666 5566 577777777777765543
No 444
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=72.72 E-value=2.7 Score=47.74 Aligned_cols=47 Identities=17% Similarity=0.142 Sum_probs=24.3
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCC
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSL 310 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l 310 (753)
|+.+.+.+|++++..| .+.++ .|+.|++++|++++-.|..+....+|
T Consensus 82 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 130 (606)
T 3vq2_A 82 LSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITL 130 (606)
T ss_dssp CCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTC
T ss_pred cCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCC
Confidence 3555555555555544 34445 45555666655555554444444333
No 445
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=72.67 E-value=2.6 Score=46.33 Aligned_cols=52 Identities=8% Similarity=0.038 Sum_probs=30.8
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccccccCC-CcccceeecCccccc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGW 299 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~ 299 (753)
+++|.+.+...++ ....|+.+.+.+|+++|..| +..+ .|+.|++++|+++|.
T Consensus 294 L~~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISPIS--NLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGGGG--GCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchhhc--CCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc
Confidence 4555555433332 12345666777777777665 4444 577777777777764
No 446
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=72.62 E-value=2 Score=47.87 Aligned_cols=50 Identities=4% Similarity=-0.181 Sum_probs=34.4
Q ss_pred cccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 262 GDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
..++.+.+.+|++++..| .+..+ .|+.|++++|++++..|..+..+..|.
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 72 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELE 72 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCC
Confidence 466777777777777664 56666 677778887777777776665555544
No 447
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=72.30 E-value=2.8 Score=44.30 Aligned_cols=46 Identities=13% Similarity=-0.012 Sum_probs=36.8
Q ss_pred ccccccccccccccCCccccccc--cccCC-CcccceeecCccccccCCC
Q 004442 257 GMDLIGDVESHLPCHTQMTASVY--RLRDN-SLPEFLSVIGKVAGWISLP 303 (753)
Q Consensus 257 ~~~~~~~~~~~l~~nN~ftGsIp--~l~~l-~L~~LnlsnN~fsG~IP~~ 303 (753)
+..+..++..+.+.+|+++ +|| .+.++ .|+.|||++|++.+.||..
T Consensus 25 P~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 25 PSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp CTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred CcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 3344567788899999998 565 47888 7999999999999999753
No 448
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=72.18 E-value=7.7 Score=41.66 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=64.0
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCC-CCcccccccCCCCCCceeeeccCCCceeeeeccccCceeeeccCHHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTG-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (753)
..+..++++.||+|+++|..+|+..+.|... .++.+--- +. -+.+.++.|..+++-+-..++... .......
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~---~~---~~l~s~s~dg~v~vwd~~~~~~~~-~~~~~~~ 393 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL---SD---KFLVSAAADGSIRGWDANDYSRKF-SYHHTNL 393 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CS---SEEEEEETTSEEEEEETTTCCEEE-EEECTTC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEE---cC---CEEEEEeCCCcEEEEECCCCceee-eecCCCC
Confidence 4457788999999999999999999998643 33322111 11 245566667666666555444321 1111111
Q ss_pred HHhCceeecCCe-eeeeceeeeEEEEecccccEEecc
Q 004442 126 IRRMPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 126 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
+. .-.++.||. +..|+ ..++..-|.++|++++..
T Consensus 394 ~~-~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~ 428 (464)
T 3v7d_B 394 SA-ITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHAN 428 (464)
T ss_dssp CC-EEEEEECSSEEEEEE-TTEEEEEETTTCCEEESC
T ss_pred cc-EEEEEeCCCEEEEec-CCeEEEEECCCCcEEehh
Confidence 11 113444554 44455 678888999999999863
No 449
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=72.10 E-value=3.6 Score=46.92 Aligned_cols=47 Identities=6% Similarity=-0.019 Sum_probs=25.3
Q ss_pred cccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCC
Q 004442 264 VESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSL 310 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l 310 (753)
|+.+.+.+|++++-.+. +.++ .|+.|+|++|++++.+|..+..+..|
T Consensus 125 L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 173 (597)
T 3oja_B 125 LTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 173 (597)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTC
T ss_pred CCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcC
Confidence 45555566666633332 3445 56666666666666655555444433
No 450
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=71.92 E-value=1.6 Score=45.23 Aligned_cols=25 Identities=4% Similarity=-0.137 Sum_probs=11.9
Q ss_pred CcccceeecCccccccCCCCCCCCC
Q 004442 285 SLPEFLSVIGKVAGWISLPGSSQNS 309 (753)
Q Consensus 285 ~L~~LnlsnN~fsG~IP~~l~s~n~ 309 (753)
.|+.|++++|++++..|..+..+.+
T Consensus 150 ~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 150 GLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp TCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CCcEEEeeCCCCccchHHHhccCCC
Confidence 3455555555555544444443333
No 451
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=71.79 E-value=4 Score=41.37 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=20.7
Q ss_pred cccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCC
Q 004442 264 VESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
|+.+.+.+|++++..+. +..+ .|+.|++++|++++..+..+.
T Consensus 131 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 174 (285)
T 1ozn_A 131 LQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 174 (285)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred CCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhc
Confidence 34555555555543332 4444 455555555555544443343
No 452
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=71.46 E-value=15 Score=38.71 Aligned_cols=111 Identities=15% Similarity=0.118 Sum_probs=59.5
Q ss_pred CCCeeEEEecCceEEEEeccCC-------eeeEEec-CCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-e
Q 004442 47 EPDVALVAALDGTIHLVDTKLG-------KIRWSFG-TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-K 117 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 117 (753)
..++.++++.||+|.++|..++ ++...+. ...++.+---.+ +..-+++.++.|..+++-+-..|+.. .
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p---~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 169 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHP---TAQNVLLSAGCDNVILVWDVGTGAAVLT 169 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECS---SBTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECc---CCCCEEEEEcCCCEEEEEECCCCCccEE
Confidence 5667888889999999998776 4444443 223332211111 11112444555555555444433332 2
Q ss_pred ec-cCHHHHHHhCceeecCC-eeeeeceeeeEEEEecccccEEecc
Q 004442 118 LS-SSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 118 ~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
+. -.-.+-| ..-.++.|| .+..|++..++...|.++|+.+...
T Consensus 170 ~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 170 LGPDVHPDTI-YSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp ECTTTCCSCE-EEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EecCCCCCce-EEEEECCCCCEEEEEecCCcEEEEeCCCCceeeee
Confidence 10 0000000 011123344 4777888889999999999998874
No 453
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=71.15 E-value=11 Score=39.03 Aligned_cols=110 Identities=9% Similarity=-0.014 Sum_probs=62.7
Q ss_pred CCCCe-eEEEecCceEEEEeccC------CeeeE-----EecC--------CCCcccccccCCCCCCceeeeccCCCcee
Q 004442 46 PEPDV-ALVAALDGTIHLVDTKL------GKIRW-----SFGT--------GRPIYSSYQASFNSNASEFYLDVDEDWEL 105 (753)
Q Consensus 46 ~~~~~-~~~~~~~~~~~~~~~~~------~~~~~-----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (753)
|..+. .++++.||+|+++|..+ ++... .+.. ..++.+.-..+ +. +.+.+.+|..+
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~--~l~~~~~dg~i 209 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE---RG--LIATGFNNGTV 209 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT---TS--EEEEECTTSEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC---Cc--eEEEEeCCCcE
Confidence 34455 77888999999999987 66655 5532 33442222211 21 45666677777
Q ss_pred eeeccccCcee-eeccC--H---HHHHHhCceeecCC-eeeeecee---eeEEEEecccccEEecc
Q 004442 106 YFHSKRFGKMK-KLSSS--A---EEYIRRMPYISKDG-GVTLGAMK---TSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 106 ~~~~~~~~~~~-~~~~~--~---~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~ 161 (753)
++-+-+.++.. .+... - ..-+ ..-.++.|| .+..|+.. .++...|.++|+.++..
T Consensus 210 ~i~d~~~~~~~~~~~~~~~h~~~~~~i-~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 210 QISELSTLRPLYNFESQHSMINNSNSI-RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEEETTTTEEEEEEECCC---CCCCCE-EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred EEEECCCCceeEEEeccccccccCCcc-ceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 66665555443 22210 0 0001 111234444 46677777 79999999999998873
No 454
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=71.07 E-value=15 Score=38.66 Aligned_cols=101 Identities=20% Similarity=0.254 Sum_probs=62.9
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCC------cccccccCCCCCCceeeeccCCCceeeeecc----------
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP------IYSSYQASFNSNASEFYLDVDEDWELYFHSK---------- 110 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 110 (753)
.....+.++.||+|.+||..+|+....|....| +.+.-..+.+. -+++.++.|..+.+=+-
T Consensus 169 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~~l~sgs~D~~v~~wd~~~~~~~~~~~ 245 (380)
T 3iz6_a 169 QETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA---NMFISGSCDTTVRLWDLRITSRAVRTY 245 (380)
T ss_dssp SSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC---CEEEEEETTSCEEEEETTTTCCCCEEE
T ss_pred CCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC---CEEEEEECCCeEEEEECCCCCcceEEE
Confidence 345678899999999999999988887753322 21111111111 13445555554444332
Q ss_pred --ccCceeeeccCHHHHHHhCceeecCC-eeeeeceeeeEEEEecccccEEeccc
Q 004442 111 --RFGKMKKLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 111 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (753)
|.+.|..+.|+ .|| .+..|+..-++..-|.++|+.+..+.
T Consensus 246 ~~h~~~v~~v~~~------------p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 246 HGHEGDINSVKFF------------PDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp CCCSSCCCEEEEC------------TTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred CCcCCCeEEEEEe------------cCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 33344444433 344 47778888899999999999998853
No 455
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=71.02 E-value=2.9 Score=43.56 Aligned_cols=52 Identities=12% Similarity=-0.024 Sum_probs=40.2
Q ss_pred cccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 260 LIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 260 ~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
....++.+.+.+|++++-.| .+.++ .|+.|++++|++++..|..+..+..|.
T Consensus 52 ~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 105 (332)
T 2ft3_A 52 ISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105 (332)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCC
T ss_pred CCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCC
Confidence 33467888888999887665 57777 699999999999988887776666555
No 456
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=70.88 E-value=20 Score=36.84 Aligned_cols=110 Identities=17% Similarity=0.194 Sum_probs=62.7
Q ss_pred eeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHHHH
Q 004442 50 VALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYIR 127 (753)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 127 (753)
..+.++.||+|.++|..+++..-.|.. ..++.+.-..+ +. -+++.++.|..+.+-+-+.++.. .+.-- ..-|.
T Consensus 156 ~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~---~~l~sg~~d~~v~~wd~~~~~~~~~~~~h-~~~v~ 230 (340)
T 1got_B 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DT---RLFVSGACDASAKLWDVREGMCRQTFTGH-ESDIN 230 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TS---SEEEEEETTSCEEEEETTTCSEEEEECCC-SSCEE
T ss_pred cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC-CC---CEEEEEeCCCcEEEEECCCCeeEEEEcCC-cCCEE
Confidence 467788999999999999988888753 22332221111 11 13455566666655544444332 11100 00000
Q ss_pred hCceeecCC-eeeeeceeeeEEEEecccccEEecccCCC
Q 004442 128 RMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDF 165 (753)
Q Consensus 128 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (753)
.=.++.|| .+..|+...++..-|.++++.+..+.+++
T Consensus 231 -~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~ 268 (340)
T 1got_B 231 -AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp -EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT
T ss_pred -EEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC
Confidence 00123343 46778888889999999999888765543
No 457
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=70.73 E-value=4 Score=39.11 Aligned_cols=49 Identities=12% Similarity=-0.050 Sum_probs=36.8
Q ss_pred cccccccccCCccccccccccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 262 GDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
..|+.+.+.+|+++ .++.+..+ .|+.|++++|++++..|..+..+..|.
T Consensus 66 ~~L~~L~l~~n~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 66 HNIKDLTINNIHAT-NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp TTCSEEEEESCCCS-CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred CCCCEEEccCCCCC-cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 45678888888654 34567777 699999999999998888776655544
No 458
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=70.47 E-value=17 Score=37.34 Aligned_cols=112 Identities=17% Similarity=0.096 Sum_probs=63.1
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 124 (753)
...+.+.++.||+|.++|..+++....|.. ..++.+.--.| +. -+.+.+++|..+.+-+-+.++.. .+.. +.
T Consensus 195 ~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~---~~l~s~s~d~~v~iwd~~~~~~~~~~~~--~~ 268 (340)
T 1got_B 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NG---NAFATGSDDATCRLFDLRADQELMTYSH--DN 268 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TS---SEEEEEETTSCEEEEETTTTEEEEEECC--TT
T ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-CC---CEEEEEcCCCcEEEEECCCCcEEEEEcc--CC
Confidence 345677888999999999999888887753 33442221111 11 12445555555555444433322 1110 00
Q ss_pred HH--HhCceeecCC-eeeeeceeeeEEEEecccccEEec-ccCC
Q 004442 125 YI--RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDN-YVLD 164 (753)
Q Consensus 125 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 164 (753)
.. -..=.++.|| .+..|+...++..-|..+|..+.. ..|+
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~ 312 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD 312 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred cccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCC
Confidence 00 0001234455 466788888889999999998877 4443
No 459
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=70.37 E-value=2.9 Score=50.00 Aligned_cols=38 Identities=8% Similarity=-0.137 Sum_probs=16.3
Q ss_pred ccccccCCccccccc--cccCC-CcccceeecCccccccCC
Q 004442 265 ESHLPCHTQMTASVY--RLRDN-SLPEFLSVIGKVAGWISL 302 (753)
Q Consensus 265 ~~~l~~nN~ftGsIp--~l~~l-~L~~LnlsnN~fsG~IP~ 302 (753)
+.+.+.+|++++..+ .+.++ .|+.|++++|++++.+|.
T Consensus 126 ~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 126 TRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp CEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred CEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 444444444444332 23334 344444444444444443
No 460
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=70.30 E-value=4.9 Score=40.50 Aligned_cols=49 Identities=10% Similarity=-0.084 Sum_probs=30.6
Q ss_pred ccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++++..+. +..+ .|+.|++++|++++..+..+.....|.
T Consensus 110 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 160 (270)
T 2o6q_A 110 NLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK 160 (270)
T ss_dssp SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccc
Confidence 456667777777765542 4555 677778888877765554444444433
No 461
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=69.93 E-value=16 Score=37.62 Aligned_cols=101 Identities=12% Similarity=0.059 Sum_probs=55.7
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecC--CCCccc-------ccccCCCCCCceeeeccCCCcee--eeeccccCce
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT--GRPIYS-------SYQASFNSNASEFYLDVDEDWEL--YFHSKRFGKM 115 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 115 (753)
..+..+.++.||+|.++|..+++....+.. +.++.+ .+.|.+..|-.+.-.|....-.+ -+...|.+.|
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v 217 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI 217 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE
Confidence 456777899999999999999988765533 333422 23333333333333332222211 1122233444
Q ss_pred eeeccCHHHHHHhCceeecCCe-eeeeceeeeEEEEecccccEEec
Q 004442 116 KKLSSSAEEYIRRMPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
..+.| +.||. +..|+ ..++..-|.++++.++.
T Consensus 218 ~~l~f------------s~~g~~l~s~~-~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 218 KEVKF------------ADNGYWMVVEC-DQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp EEEEE------------CTTSSEEEEEE-SSBEEEEETTSSTTCBS
T ss_pred EEEEE------------eCCCCEEEEEe-CCeEEEEEcCCCCccee
Confidence 44443 44553 44555 44888889988877665
No 462
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=69.66 E-value=6.8 Score=38.29 Aligned_cols=101 Identities=16% Similarity=0.149 Sum_probs=60.1
Q ss_pred ecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeecccc-CceeeeccCHHHHHHhCceee
Q 004442 55 ALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRF-GKMKKLSSSAEEYIRRMPYIS 133 (753)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 133 (753)
..|++|+++|..+++...-+..+.++.+.-- .++.. -+.+ ..+..||+-+... ++...+.-....-.-..+.++
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~-spdg~-~l~~---~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNW-SPDGK-YLLL---NSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEE-CTTSS-EEEE---EETTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEE-CCCCC-EEEE---EcCCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 5799999999999988876666666533222 22222 1222 2355777777666 666654322111112347788
Q ss_pred cCCee-eeec----eeeeEEEEecccccEEec
Q 004442 134 KDGGV-TLGA----MKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 134 ~~~~~-~~~~----~~~~~~~~~~~~~~~~~~ 160 (753)
.||.. ..++ ....++.+|..+|.....
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCCEEC
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCceEEe
Confidence 88853 3333 257888888888775544
No 463
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=69.63 E-value=9.4 Score=38.83 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=30.2
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcc
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIY 81 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (753)
..+..++++.||+|.++|..+++..+.+..+.++.
T Consensus 229 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 263 (369)
T 3zwl_B 229 DLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLN 263 (369)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEE
T ss_pred CCCEEEEecCCceEEEEECCCCceeeeecCCCCce
Confidence 45677888999999999999999999998777763
No 464
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=69.63 E-value=15 Score=37.08 Aligned_cols=112 Identities=12% Similarity=0.013 Sum_probs=61.4
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eecc---C
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSS---S 121 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~ 121 (753)
+.....++++.||+|+++|..+++..+......++.+---.+...+. -+.+.+..|..+++-+-+.++.. .+.. .
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISM-NKLVATSLEGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSC-CEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCC-CEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence 56678888999999999999999999998888887444333210011 13455666666665543333221 1100 0
Q ss_pred HHHHHHhCceeecCCe--eeeeceeeeEEEEecccccEE
Q 004442 122 AEEYIRRMPYISKDGG--VTLGAMKTSVFLVDVKSGRVV 158 (753)
Q Consensus 122 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 158 (753)
...---..-.++.||. +..|+...++...|.+++...
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 0000000112345554 556666666666666665543
No 465
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=69.33 E-value=5.1 Score=41.83 Aligned_cols=111 Identities=7% Similarity=0.019 Sum_probs=59.8
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCccc-------------ccccCCCCCCceeeeccCCCceeeeeccccC
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYS-------------SYQASFNSNASEFYLDVDEDWELYFHSKRFG 113 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (753)
..+..++++.||+|+++|..+++....+........ -+......+ -.++-+..|..+++-+-..+
T Consensus 160 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~i~~~d~~~~ 237 (425)
T 1r5m_A 160 DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD--DKFVIPGPKGAIFVYQITEK 237 (425)
T ss_dssp TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET--TEEEEECGGGCEEEEETTCS
T ss_pred CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC--CEEEEEcCCCeEEEEEcCCC
Confidence 455678889999999999999999998876654200 000000011 12455555666665554444
Q ss_pred cee-eeccCHHHHHHhCceeecCC-eeeeeceeeeEEEEecccccEEecc
Q 004442 114 KMK-KLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 114 ~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
+.. .+. .-..-| ..-.++.|| .+..|+...++...|..+|+.+...
T Consensus 238 ~~~~~~~-~~~~~i-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 285 (425)
T 1r5m_A 238 TPTGKLI-GHHGPI-SVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCF 285 (425)
T ss_dssp SCSEEEC-CCSSCE-EEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEE
T ss_pred ceeeeec-cCCCce-EEEEECCCCCEEEEEcCCCEEEEEECCCCccceEe
Confidence 332 111 000000 011233344 4666777777778888887766663
No 466
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=69.24 E-value=3 Score=48.04 Aligned_cols=52 Identities=10% Similarity=0.043 Sum_probs=31.8
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccccccCC-CcccceeecCccccc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGW 299 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~ 299 (753)
+++|.+.+...++.. ..|+.+.+.+|++++.+| +..+ .|+.|+|++|++++.
T Consensus 138 Ls~N~l~~l~~l~~l--~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 138 LGNNKITDITVLSRL--TKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CCSSCCCCCGGGGSC--TTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC
T ss_pred CCCCccCCchhhccc--CCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCCC
Confidence 444445443333322 245667777777777666 6666 677778887777773
No 467
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=69.11 E-value=12 Score=39.10 Aligned_cols=113 Identities=14% Similarity=0.071 Sum_probs=62.3
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecC-CCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHH
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (753)
.+..+.++.||+|.++|..+++..-.|.. ..++.+.--.| +. -+.+.++.|..+.+-+-+.++.. .+...-..+
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~---~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~ 285 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP-SG---DAFASGSDDATCRLYDLRADREVAIYSKESIIF 285 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TS---SEEEEEETTSCEEEEETTTTEEEEEECCTTCCS
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC-CC---CEEEEEeCCCeEEEEECCCCcEEEEEcCCCccc
Confidence 36788899999999999999988877753 23442211111 11 12445555555544443333221 111000000
Q ss_pred HHhCceeecCC-eeeeeceeeeEEEEecccccEEec-ccCC
Q 004442 126 IRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDN-YVLD 164 (753)
Q Consensus 126 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 164 (753)
-...-.++.|| .+..|+...++..-|..+|+.+.. ..|.
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~ 326 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE 326 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCC
Confidence 00011234455 456688778889999999998877 4443
No 468
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=69.05 E-value=4.7 Score=40.61 Aligned_cols=67 Identities=7% Similarity=-0.084 Sum_probs=45.9
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
+++|.+.....-.-.....|+.+.+.+|++++..+ .+..+ .|+.|++++|++++..|..+.....|.
T Consensus 35 ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (276)
T 2z62_A 35 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ 103 (276)
T ss_dssp CTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCcccc
Confidence 45555553332111112356888888999987665 57777 799999999999998887776665554
No 469
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=68.60 E-value=3.6 Score=45.39 Aligned_cols=35 Identities=9% Similarity=-0.007 Sum_probs=18.4
Q ss_pred cccccccCCccccccccccCC-CcccceeecCcccccc
Q 004442 264 VESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWI 300 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~I 300 (753)
++.+.+.+|+|+| || +..+ .|+.|++++|+|+|..
T Consensus 214 L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 214 LTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp CSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCCSCCC
T ss_pred CCEEECcCCcccc-cC-ccccCCCCEEEeeCCcCCCcC
Confidence 3455555555555 44 4444 4555555555555543
No 470
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=68.52 E-value=18 Score=41.14 Aligned_cols=140 Identities=14% Similarity=0.068 Sum_probs=79.3
Q ss_pred HHHHhhccCCCccCCCCC--chhHHHhhhccC-----CCCCCCCCC---eeEEEe-cCceEEEEeccCCeeeEEecCCCC
Q 004442 11 STAIIQSVSSSELSATPP--NRYVSEIYNSLL-----PPPLPPEPD---VALVAA-LDGTIHLVDTKLGKIRWSFGTGRP 79 (753)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 79 (753)
++.|+++..+ ++++ -..+.+.++.+. |.+++...| .++|+. .||+|.++|..++++.+.+.+|.-
T Consensus 123 l~~yi~~~~~----~~~~~~~~~i~~s~kv~~~~~~~P~~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~ 198 (567)
T 1qks_A 123 MANYLLLDPA----APPEFGMKEMRESWKVHVAPEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA 198 (567)
T ss_dssp HHHHHHSCCC----CCCCCCHHHHHHHCEESSCGGGSCSSCCSCCCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSC
T ss_pred HHHHHhhccc----CCCccchhhhhccceeeccccccccccccccCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC
Confidence 5677777754 1221 234555566665 334434434 445544 479999999999999999999865
Q ss_pred cccccccCCCCCCceeeeccCCCceeeeeccc--cCcee-eeccCHHHHHHhCceee----cCC-eeeeecee-eeEEEE
Q 004442 80 IYSSYQASFNSNASEFYLDVDEDWELYFHSKR--FGKMK-KLSSSAEEYIRRMPYIS----KDG-GVTLGAMK-TSVFLV 150 (753)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~-~~~~~~ 150 (753)
.|..-. .-|....|.. .+|..+++=+-. .+++. ++.. +.. -+.=.+| .|| .++.+... .++..+
T Consensus 199 p~~v~~---SpDGr~lyv~-~~dg~V~viD~~~~t~~~v~~i~~--G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 199 VHISRL---SASGRYLFVI-GRDGKVNMIDLWMKEPTTVAEIKI--GSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp EEEEEE---CTTSCEEEEE-ETTSEEEEEETTSSSCCEEEEEEC--CSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred ccceEE---CCCCCEEEEE-cCCCeEEEEECCCCCCcEeEEEec--CCC-CceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 442221 2232323443 345556665553 33333 2221 110 0111456 366 56666554 566777
Q ss_pred ecccccEEecc
Q 004442 151 DVKSGRVVDNY 161 (753)
Q Consensus 151 ~~~~~~~~~~~ 161 (753)
|+.|++++.+-
T Consensus 272 D~~t~~~~~~i 282 (567)
T 1qks_A 272 DGETLEPKKIQ 282 (567)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCcEEEEE
Confidence 99999999873
No 471
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=68.49 E-value=3.7 Score=42.21 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=20.7
Q ss_pred cccccccCCccccccccccCC-CcccceeecCccccccC
Q 004442 264 VESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWIS 301 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP 301 (753)
|+.+.+.+|++++- +.+..+ .|+.|++++|++++..|
T Consensus 136 L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 136 LESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh
Confidence 35555556665553 445555 46666666666665444
No 472
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=68.47 E-value=20 Score=37.04 Aligned_cols=107 Identities=14% Similarity=0.098 Sum_probs=60.4
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHH
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (753)
.....+.++.||+|.++|..+++....+....++.+....+.+.+. -+.+.+..|..+++-+-+.++.. .+.-. ...
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~ 188 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKH-CLVAVGTRGPKVQLCDLKSGSCSHILQGH-RQE 188 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSC-CEEEEEESSSSEEEEESSSSCCCEEECCC-CSC
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCC-cEEEEEcCCCeEEEEeCCCcceeeeecCC-CCc
Confidence 5567888899999999999999999999988877554444333322 23344455555555444433322 11100 000
Q ss_pred HHhCceeecCCe--eeeeceeeeEEEEeccccc
Q 004442 126 IRRMPYISKDGG--VTLGAMKTSVFLVDVKSGR 156 (753)
Q Consensus 126 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 156 (753)
| ..-.++.+|. +..|+...++...|.+++.
T Consensus 189 v-~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 189 I-LAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp E-EEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred E-EEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 0 0112334553 5556666666666666654
No 473
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=68.45 E-value=4.2 Score=46.01 Aligned_cols=47 Identities=9% Similarity=-0.077 Sum_probs=25.5
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCC
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSL 310 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l 310 (753)
|+.+.+.+|++++..| .+.++ .|+.|++++|++++..|..+.....|
T Consensus 59 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 107 (606)
T 3t6q_A 59 LTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKAL 107 (606)
T ss_dssp CSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTC
T ss_pred ceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccc
Confidence 3555555566655444 34555 46666666666666555555444443
No 474
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=68.44 E-value=5 Score=41.70 Aligned_cols=111 Identities=19% Similarity=0.133 Sum_probs=65.4
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEec--------------CCCCcccccccCCCCCCceeeeccCCCceeeeecccc
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG--------------TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRF 112 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (753)
..+..+.++.||+|.++|..+++....+. ...++.+.--.+.+ .-+.+.++.|..+++-+-..
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~s~~~d~~i~iwd~~~ 131 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD---TGMFTSSSFDKTLKVWDTNT 131 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC---TTCEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC---CcEEEEEeCCCeEEEeeCCC
Confidence 56778888999999999998877666664 33344222221211 12356667777777776666
Q ss_pred CceeeeccCHHHH---HHhCceeecCCeeeeeceeeeEEEEecccccEEecc
Q 004442 113 GKMKKLSSSAEEY---IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 113 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
++....- ..++- +...|.-.+.-.+..|+...++...|.++|+.+...
T Consensus 132 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 182 (408)
T 4a11_B 132 LQTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL 182 (408)
T ss_dssp TEEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE
T ss_pred Cccceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee
Confidence 5544211 11111 111222222335777888888888888888877663
No 475
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=68.40 E-value=7.2 Score=43.84 Aligned_cols=61 Identities=7% Similarity=-0.048 Sum_probs=42.3
Q ss_pred CCCcccccCCCCc--cccccccccccccCCcccccccc--ccCC-CcccceeecCccccccCCCCC
Q 004442 245 FSGYHFNSGSELG--MDLIGDVESHLPCHTQMTASVYR--LRDN-SLPEFLSVIGKVAGWISLPGS 305 (753)
Q Consensus 245 ~~~~~~~~~~~l~--~~~~~~~~~~l~~nN~ftGsIp~--l~~l-~L~~LnlsnN~fsG~IP~~l~ 305 (753)
+++|.+.+..+++ -.....++.+.+.+|++++.+|. +..+ .|+.|++++|+++|.+|..+.
T Consensus 384 L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~ 449 (562)
T 3a79_B 384 LQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP 449 (562)
T ss_dssp CCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC
T ss_pred CCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc
Confidence 6667666433211 01123567888889999998863 5566 799999999999998887764
No 476
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=68.23 E-value=6.8 Score=44.63 Aligned_cols=49 Identities=4% Similarity=-0.102 Sum_probs=31.8
Q ss_pred ccccccccCCcccccccc-ccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 263 DVESHLPCHTQMTASVYR-LRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~-l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.|+.+.+.+|++++..|. +.++ .|+.|+|++|++++..|..+..+..|.
T Consensus 100 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 150 (597)
T 3oja_B 100 TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 150 (597)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCC
Confidence 457777778888876653 5666 588888888888854444444444443
No 477
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=68.08 E-value=7.7 Score=41.26 Aligned_cols=114 Identities=15% Similarity=0.116 Sum_probs=69.9
Q ss_pred CCCCeeEEEecCceEEEEeccCCeeeEEe--cCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eec---
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGKIRWSF--GTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLS--- 119 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 119 (753)
|..+..+.++.||+|.++|..+++..-.+ ....++.+--..+.-+....+.+.+.+|..+++-+-+.|+.. .+.
T Consensus 224 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 303 (437)
T 3gre_A 224 EECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD 303 (437)
T ss_dssp TTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSS
T ss_pred CCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCC
Confidence 34667888999999999999999987766 445566544332222222345666777777777666655533 211
Q ss_pred -------cCHHH---------------HHHhCceeecCCeeeeeceeeeEEEEecccccEEec
Q 004442 120 -------SSAEE---------------YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 120 -------~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
++..+ -| ..=.++++..+..|+...++..-|.++|+.++.
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v-~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 304 EQPSMEHFLPIEKGLEELNFCGIRSLNAL-STISVSNDKILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp SCCCGGGGSCBCSSGGGCCCCCCCSGGGG-CCEEEETTEEEEEEGGGTEEEEEETTCGGGCEE
T ss_pred CCCccceecccccccccceecccccCCce-EEEEECCceEEEecCCCCeEEEEECCCcccceE
Confidence 11100 00 001344333577788888888888888887776
No 478
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=67.53 E-value=5.7 Score=44.91 Aligned_cols=48 Identities=8% Similarity=-0.059 Sum_probs=23.6
Q ss_pred cccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 264 VESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
|+.+.+.+|++++..| .+.++ .|+.||+++|++++.+|..+....+|.
T Consensus 58 L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 107 (606)
T 3vq2_A 58 LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLE 107 (606)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCC
T ss_pred CcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCC
Confidence 3444455555555443 24444 455555555555555555544444433
No 479
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=67.33 E-value=7.5 Score=41.07 Aligned_cols=110 Identities=16% Similarity=0.129 Sum_probs=57.2
Q ss_pred CCCeeEEEe------cCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeecc---------CCCceeeeeccc
Q 004442 47 EPDVALVAA------LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDV---------DEDWELYFHSKR 111 (753)
Q Consensus 47 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 111 (753)
.+..+.|++ .||+|+++|..+++..=.+..|.-- .. -...|....|.-. +.+-.+.+=+..
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p---~i-~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG---HV-QVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE---EE-EECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC---ce-EECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 456677776 3889999999999887777666321 11 1122222223322 112223333333
Q ss_pred cCcee-eeccCHHHH-HHhCc---eeecCC-eeeeece--eeeEEEEecccccEEec
Q 004442 112 FGKMK-KLSSSAEEY-IRRMP---YISKDG-GVTLGAM--KTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 112 ~~~~~-~~~~~~~~~-~~~~~---~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~ 160 (753)
.+++. .++...+.+ .-..| .+|.|| .++.... ..++-.+|.++++++..
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 33332 332111000 00011 467787 4555553 46788889999998875
No 480
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=67.27 E-value=27 Score=35.23 Aligned_cols=100 Identities=9% Similarity=0.031 Sum_probs=57.4
Q ss_pred CCCeeEEEecCceEEEEeccCCeeeEEecC-CCCccc-------ccccCCCCCCceeeeccCCCceeeeeccccCceeee
Q 004442 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYS-------SYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKL 118 (753)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (753)
.....+.+..||+|.+||..+++....+.. ..|+.+ .+.+.+..|..+..-|....-.+..-..|.+.|.-+
T Consensus 24 ~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~ 103 (304)
T 2ynn_A 24 TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI 103 (304)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEE
Confidence 345678889999999999999988887763 334422 233333344333333322222222222233444444
Q ss_pred ccCHHHHHHhCceeecCC-eeeeeceeeeEEEEecccccEE
Q 004442 119 SSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVV 158 (753)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 158 (753)
+++ .|| .+..|+..-++..-|.++|..+
T Consensus 104 ~~~------------~~~~~l~sgs~D~~v~lWd~~~~~~~ 132 (304)
T 2ynn_A 104 AVH------------PTKPYVLSGSDDLTVKLWNWENNWAL 132 (304)
T ss_dssp EEC------------SSSSEEEEEETTSCEEEEEGGGTTEE
T ss_pred EEc------------CCCCEEEEECCCCeEEEEECCCCcch
Confidence 433 333 4667888788888898888433
No 481
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=67.12 E-value=4.1 Score=41.83 Aligned_cols=52 Identities=10% Similarity=0.087 Sum_probs=36.7
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccccccCC-CcccceeecCccccc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGW 299 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~ 299 (753)
+++|.+.+...++. ...|+.+.+.+|++++..+ +..+ .|+.|++++|++++.
T Consensus 141 l~~n~l~~~~~l~~--l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 141 LGNNKITDITVLSR--LTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp CCSSCCCCCGGGGG--CTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC
T ss_pred ccCCcCCcchhhcc--CCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCCC
Confidence 45555554433332 2356888888999998766 7777 799999999999873
No 482
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=66.81 E-value=6 Score=42.11 Aligned_cols=42 Identities=7% Similarity=0.014 Sum_probs=19.4
Q ss_pred cccccccCCcccccccc--ccCC-CcccceeecCccccccCCCCCC
Q 004442 264 VESHLPCHTQMTASVYR--LRDN-SLPEFLSVIGKVAGWISLPGSS 306 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~--l~~l-~L~~LnlsnN~fsG~IP~~l~s 306 (753)
|+.+.+.+|+++ .+|. +.++ .|+.|++++|++++..|..+..
T Consensus 119 L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 163 (390)
T 3o6n_A 119 LTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA 163 (390)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSS
T ss_pred CCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccC
Confidence 344445555555 2321 2334 4555555555555544444433
No 483
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=66.73 E-value=2 Score=31.54 Aligned_cols=13 Identities=0% Similarity=-0.079 Sum_probs=7.6
Q ss_pred HHHhhheeeeccc
Q 004442 380 PIIGFLFYHSKQV 392 (753)
Q Consensus 380 ~~i~~~~~~~rr~ 392 (753)
++.+|+-.|+.++
T Consensus 30 ~~~~~~RRR~~~~ 42 (44)
T 2jwa_A 30 VFGILIKRRQQKI 42 (44)
T ss_dssp HHHHHHHHHCSCC
T ss_pred HHHhheehhhhhc
Confidence 4455777766554
No 484
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=66.50 E-value=5.3 Score=43.80 Aligned_cols=53 Identities=8% Similarity=-0.142 Sum_probs=38.2
Q ss_pred ccccccccccccCCccccccc-cccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 259 DLIGDVESHLPCHTQMTASVY-RLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 259 ~~~~~~~~~l~~nN~ftGsIp-~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
.+...++.+.+.+|++++..+ .+.++ .|+.|+|++|++++..|..+..+.+|.
T Consensus 29 ~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 83 (477)
T 2id5_A 29 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLR 83 (477)
T ss_dssp CCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCC
Confidence 344566777888888887664 56666 688888888888887777776655554
No 485
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=66.48 E-value=12 Score=41.57 Aligned_cols=108 Identities=12% Similarity=0.099 Sum_probs=72.3
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEe-----cCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccC
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSF-----GTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSS 121 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 121 (753)
.+..++++.||+|+++|..+++....+ ....++.+.--. + .-+.+.+..|..+++-+-..++.. .+...
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--D---SQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--S---SSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc--C---CCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 567888899999999999999999999 455666443222 1 124566677777777666666544 33322
Q ss_pred ---HHHHHHhCceeecCCeeeeeceeeeEEEEecccccEEecc
Q 004442 122 ---AEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 122 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
.... ...-..+++..+..|+...++...|..+|+.+...
T Consensus 294 ~~~~~~~-~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 335 (615)
T 1pgu_A 294 KQQLGNQ-QVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTI 335 (615)
T ss_dssp TTCGGGC-EEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEE
T ss_pred CCcccCc-eeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEE
Confidence 1111 11122336777888888899999999999988873
No 486
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=66.36 E-value=4.2 Score=47.04 Aligned_cols=31 Identities=10% Similarity=0.133 Sum_probs=14.0
Q ss_pred cccccccCCccccccccccCC-CcccceeecCccc
Q 004442 264 VESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVA 297 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fs 297 (753)
|+.+.+.+|++++ || ..+ .|+.|++++|+++
T Consensus 223 L~~L~Ls~N~L~~-lp--~~l~~L~~L~Ls~N~L~ 254 (622)
T 3g06_A 223 LKELIVSGNRLTS-LP--VLPSELKELMVSGNRLT 254 (622)
T ss_dssp CCEEECCSSCCSC-CC--CCCTTCCEEECCSSCCS
T ss_pred CCEEEccCCccCc-CC--CCCCcCcEEECCCCCCC
Confidence 3444444555544 33 122 3444555555554
No 487
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=66.23 E-value=20 Score=38.23 Aligned_cols=98 Identities=13% Similarity=0.191 Sum_probs=57.6
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecCC-CCcccccccCCCCCCceeeeccCCCceeeeecccc-----------Cce
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTG-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRF-----------GKM 115 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 115 (753)
..+.+.+..||+|.+||..+|+..-.|..- .++.+---.+ +. -+.+.++.|..+.+-+-.. +.|
T Consensus 120 ~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~---~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V 195 (410)
T 1vyh_C 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195 (410)
T ss_dssp SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TS---SEEEEEETTSCCCEEETTSSCEEECCCCCSSCE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC-CC---CEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCE
Confidence 356777889999999999888777666532 2332111111 11 1234455554444433222 233
Q ss_pred eeeccCHHHHHHhCceeecCC-eeeeeceeeeEEEEecccccEEecc
Q 004442 116 KKLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
..+.| +.|| .+..|+...++..-|..+|..+++.
T Consensus 196 ~~v~~------------~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 196 SSVSI------------MPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp EEEEE------------CSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEE------------eCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 33332 2344 4777888889999999999988773
No 488
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=66.07 E-value=3.2 Score=50.07 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=22.1
Q ss_pred cccccccCCcccccccc---ccCC-CcccceeecCccccccCCCCCCC
Q 004442 264 VESHLPCHTQMTASVYR---LRDN-SLPEFLSVIGKVAGWISLPGSSQ 307 (753)
Q Consensus 264 ~~~~l~~nN~ftGsIp~---l~~l-~L~~LnlsnN~fsG~IP~~l~s~ 307 (753)
|+.+.+.+|+|+ .||. +.++ .|+.|+|++|+++ .|| .+..+
T Consensus 550 L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L 594 (876)
T 4ecn_A 550 IQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTN 594 (876)
T ss_dssp CCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTT
T ss_pred ccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCC
Confidence 455555566665 5554 4455 4556666666665 555 44433
No 489
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=65.64 E-value=2.6 Score=48.75 Aligned_cols=43 Identities=9% Similarity=0.015 Sum_probs=21.7
Q ss_pred ccccccccCCccccccccccCC-CcccceeecCccccccCCCCCCCCC
Q 004442 263 DVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISLPGSSQNS 309 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~ 309 (753)
.|+.+.+.+|+|+ +||. .+ .|+.|+|++|+++ .||..+..+.+
T Consensus 242 ~L~~L~Ls~N~L~-~lp~--~~~~L~~L~Ls~N~L~-~lp~~l~~l~~ 285 (622)
T 3g06_A 242 ELKELMVSGNRLT-SLPM--LPSGLLSLSVYRNQLT-RLPESLIHLSS 285 (622)
T ss_dssp TCCEEECCSSCCS-CCCC--CCTTCCEEECCSSCCC-SCCGGGGGSCT
T ss_pred cCcEEECCCCCCC-cCCc--ccccCcEEeCCCCCCC-cCCHHHhhccc
Confidence 3455555555555 3443 22 4555566666555 55544444333
No 490
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=65.51 E-value=3.9 Score=44.88 Aligned_cols=62 Identities=3% Similarity=-0.007 Sum_probs=45.7
Q ss_pred CCCcccccCCCCccccccccccccccCCccccccccccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 245 FSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
+++|.+.+..+++ ....++.+.+.+|+++|. +.+..+ .|+.|++++|+++|.+| +.....|.
T Consensus 316 L~~n~l~~~~~~~--~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 378 (466)
T 1o6v_A 316 LYFNNISDISPVS--SLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP--LANLTRIT 378 (466)
T ss_dssp CCSSCCSCCGGGG--GCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCC
T ss_pred CcCCcCCCchhhc--cCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCccch--hhcCCCCC
Confidence 6667776555443 234568888889999985 778888 79999999999999998 44444443
No 491
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=65.48 E-value=10 Score=40.08 Aligned_cols=107 Identities=14% Similarity=0.160 Sum_probs=62.4
Q ss_pred CCeeEEEecCceEEEEeccCCee----eEEecCCC-------------CcccccccCCCCCCceeeeccCCCceeeeecc
Q 004442 48 PDVALVAALDGTIHLVDTKLGKI----RWSFGTGR-------------PIYSSYQASFNSNASEFYLDVDEDWELYFHSK 110 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (753)
+++.+.++.||+|.++|..+++. ...|.... ++.+---.+ +.. +.+.+++ ..+++-+-
T Consensus 239 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~---~l~~~~~-~~v~iwd~ 313 (447)
T 3dw8_B 239 CNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGR---YMMTRDY-LSVKVWDL 313 (447)
T ss_dssp TTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT-TSS---EEEEEES-SEEEEEET
T ss_pred CcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC-CCC---EEEEeeC-CeEEEEeC
Confidence 47889999999999999988775 56665443 442221111 111 2223333 55555444
Q ss_pred cc-Ccee-eeccCHHHHHHh---------------CceeecCCe-eeeeceeeeEEEEecccccEEecc
Q 004442 111 RF-GKMK-KLSSSAEEYIRR---------------MPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDNY 161 (753)
Q Consensus 111 ~~-~~~~-~~~~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 161 (753)
+. ++.. .+.. .+.+.. .-.++.||. +..|+...++..-|.++|+.+...
T Consensus 314 ~~~~~~~~~~~~--~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 314 NMENRPVETYQV--HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp TCCSSCSCCEES--CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred CCCccccceeec--cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeee
Confidence 43 3322 2221 111111 135667775 778898899999999999998763
No 492
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=65.40 E-value=11 Score=40.34 Aligned_cols=108 Identities=18% Similarity=0.156 Sum_probs=57.0
Q ss_pred CCCCCeeEEEecCceEEEEeccCCe--eeEEe-cCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCceeeeccC
Q 004442 45 PPEPDVALVAALDGTIHLVDTKLGK--IRWSF-GTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSS 121 (753)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (753)
|..+++..+++.||+|.+||-.+++ ....+ .-..++.+.--.|.+.+ +.+.++.|..+.+-+-..+.+..+.-.
T Consensus 129 P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~---~l~s~s~D~~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 129 PTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTN---QFYASSMEGTTRLQDFKGNILRVFASS 205 (435)
T ss_dssp SSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTT---EEEEECSSSCEEEEETTSCEEEEEECC
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCC---EEEEEeCCCEEEEeeccCCceeEEecc
Confidence 4567888899999999999986654 23333 23456644333333332 355667776665544443433322210
Q ss_pred HHHHH-HhCceeecCC-eeeeeceeeeEEEEecccc
Q 004442 122 AEEYI-RRMPYISKDG-GVTLGAMKTSVFLVDVKSG 155 (753)
Q Consensus 122 ~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 155 (753)
-..-+ -..-.++.|| .+..|+..-++...|.++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 206 DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC
T ss_pred CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc
Confidence 00000 0011234454 3556777777777776543
No 493
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=65.04 E-value=3.5 Score=43.95 Aligned_cols=49 Identities=14% Similarity=0.023 Sum_probs=37.5
Q ss_pred cccccccccCCccccccccccCC-CcccceeecCccccccCCCCCCCCCCc
Q 004442 262 GDVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISLPGSSQNSLL 311 (753)
Q Consensus 262 ~~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~l~ 311 (753)
..++.+.+.+|++++. +.+..+ .|+.|++++|.+++.+|..+..+..|.
T Consensus 226 ~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 275 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 275 (390)
T ss_dssp SSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred ccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCC
Confidence 4567778888888874 667777 688899999999988887776665554
No 494
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=64.69 E-value=3.6 Score=42.90 Aligned_cols=46 Identities=7% Similarity=-0.071 Sum_probs=28.0
Q ss_pred ccccccccCCccccccccccCC-CcccceeecCccccccCCCCCCCCC
Q 004442 263 DVESHLPCHTQMTASVYRLRDN-SLPEFLSVIGKVAGWISLPGSSQNS 309 (753)
Q Consensus 263 ~~~~~l~~nN~ftGsIp~l~~l-~L~~LnlsnN~fsG~IP~~l~s~n~ 309 (753)
.++.+.+.+|++++ ++.+..+ .|+.|++++|++++..|..+.....
T Consensus 266 ~L~~L~l~~n~l~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 312 (347)
T 4fmz_A 266 KLKMLNVGSNQISD-ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312 (347)
T ss_dssp TCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCGGGHHHHHTCTT
T ss_pred CcCEEEccCCccCC-ChhhcCCCCCCEEECcCCcCCCcChhHhhcccc
Confidence 34666666777665 3555555 5777777777777666654444333
No 495
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=64.44 E-value=7.3 Score=40.47 Aligned_cols=107 Identities=8% Similarity=0.034 Sum_probs=60.7
Q ss_pred ecCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCC----ceeeeeccccCceeeeccCHHHHHHhCc
Q 004442 55 ALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDED----WELYFHSKRFGKMKKLSSSAEEYIRRMP 130 (753)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (753)
..+++||++|..+|+...-+.....+ ....-.+.++..++|...+.. ..||+-+...++++.+.-..+...-..|
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~~~~~~~-~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIHQDTAWL-GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCE-EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred CCcceEEEEECCCCcEEeeccCCccc-ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 35678999998887766555333222 111111212223666654333 5787766555555544321112223457
Q ss_pred eeecCCe-eeeecee-----eeEEEEecccccEEeccc
Q 004442 131 YISKDGG-VTLGAMK-----TSVFLVDVKSGRVVDNYV 162 (753)
Q Consensus 131 ~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~ 162 (753)
.+|.||. |..++.. .+++.+|..+|+......
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 281 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV 281 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee
Confidence 8899996 4455443 569999999998766543
No 496
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=64.14 E-value=9.8 Score=39.10 Aligned_cols=98 Identities=12% Similarity=0.006 Sum_probs=59.6
Q ss_pred cCceEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCcee-eeccCHHHHHHhCce---
Q 004442 56 LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYIRRMPY--- 131 (753)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 131 (753)
.++++|.+|..+++.+=.|..+ |. -.=.+ .|....|.... +-+|++-++...++. ++...- +-.|+
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~-~e-GwGLt---~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~----~g~~v~~l 183 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYS-GE-GWGLC---YWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKL----RGQPVELI 183 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECS-SC-CCCEE---EETTEEEEECS-SSEEEEECTTTCCEEEEEECEE----TTEECCCE
T ss_pred cCCEEEEEECCcCcEEEEEeCC-Cc-eeEEe---cCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCC----CCcccccc
Confidence 5889999999999988888763 21 00000 11122333332 445666666655555 333211 11111
Q ss_pred ---eecCCeeeeec-eeeeEEEEecccccEEecccC
Q 004442 132 ---ISKDGGVTLGA-MKTSVFLVDVKSGRVVDNYVL 163 (753)
Q Consensus 132 ---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 163 (753)
--.||.|+... ...++..+|++||+|+...++
T Consensus 184 NeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 184 NELECANGVIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp EEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred cccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 11389999887 678999999999999999665
No 497
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=63.82 E-value=7.2 Score=39.65 Aligned_cols=112 Identities=6% Similarity=0.062 Sum_probs=60.1
Q ss_pred CCCCeeEEEecCceEEEEeccCCe-eeEEecCCC-----CcccccccC-CCCCCceeeeccCCCceeeeeccccCceeee
Q 004442 46 PEPDVALVAALDGTIHLVDTKLGK-IRWSFGTGR-----PIYSSYQAS-FNSNASEFYLDVDEDWELYFHSKRFGKMKKL 118 (753)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (753)
+..+..+.++.||+|.++|..+++ +...+.... ++++.-..+ .+.+ .-+.+.+.+|..+++-+-+.++....
T Consensus 127 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~ 205 (357)
T 3i2n_A 127 EGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE-ERVVCAGYDNGDIKLFDLRNMALRWE 205 (357)
T ss_dssp -CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C-CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC-CCEEEEEccCCeEEEEECccCceeee
Confidence 345578889999999999998876 666665321 332221111 1111 12344555666666665555554322
Q ss_pred ccCHHHHHHhCceee----cCCeeeeeceeeeEEEEecccccEEec
Q 004442 119 SSSAEEYIRRMPYIS----KDGGVTLGAMKTSVFLVDVKSGRVVDN 160 (753)
Q Consensus 119 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (753)
. ..+.-| ..-.++ +...+..|+...++...|.++++.+..
T Consensus 206 ~-~~~~~v-~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 249 (357)
T 3i2n_A 206 T-NIKNGV-CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG 249 (357)
T ss_dssp E-ECSSCE-EEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE
T ss_pred c-CCCCce-EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc
Confidence 1 001001 011122 445567777777777888887765544
No 498
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=63.73 E-value=6.2 Score=40.26 Aligned_cols=104 Identities=15% Similarity=0.111 Sum_probs=0.0
Q ss_pred CeeEEEecCceEEEEeccCCeeeEEec-CCCCcccccccC-CCCCCceeeeccCCCceeeeeccccCceeeec---cCHH
Q 004442 49 DVALVAALDGTIHLVDTKLGKIRWSFG-TGRPIYSSYQAS-FNSNASEFYLDVDEDWELYFHSKRFGKMKKLS---SSAE 123 (753)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 123 (753)
...++++.||+|.++|..+++....|. ...++.+---.+ ...- .+.+.+|..+++-+-..++....- -.-.
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNL----LLSVSKDHALRLWNIQTDTLVAIFGGVEGHR 161 (366)
T ss_dssp EEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTE----EEEEETTSCEEEEETTTTEEEEEECSTTSCS
T ss_pred CEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCE----EEEEeCCCeEEEEEeecCeEEEEeccccccc
Q ss_pred HHHHhCceeecCCeeeeeceeeeEEEEeccccc
Q 004442 124 EYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGR 156 (753)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (753)
..|...-+..+...+..|+...++...|.++|+
T Consensus 162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 162 DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred CceeEEEECCCCCEEEEecCCCCEEEEECCCCc
No 499
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=63.54 E-value=10 Score=40.85 Aligned_cols=129 Identities=13% Similarity=0.119 Sum_probs=0.0
Q ss_pred CCCCeeEEEecCc---eEEEEeccCCeeeEEecCCCCcccccccCCCCCCceeeeccCCCceeeeeccccCceeeeccCH
Q 004442 46 PEPDVALVAALDG---TIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSA 122 (753)
Q Consensus 46 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (753)
|.-...++++.|+ +|+++|..+|+...-....... .+-.-.++...=+|-...+.++.||+-+-..|++ ..++-
T Consensus 188 pdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~-~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~--~~l~~ 264 (415)
T 2hqs_A 188 PDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHN-GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI--RQVTD 264 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EECCC
T ss_pred CCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcc-cCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE--EeCcC
Q ss_pred HHHHHhCceeecCCe-eeeeceee---eEEEEecccccEEecccCCCCCCCCCCCcccC
Q 004442 123 EEYIRRMPYISKDGG-VTLGAMKT---SVFLVDVKSGRVVDNYVLDFSASTPGFQSDEN 177 (753)
Q Consensus 123 ~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (753)
..-....|.++.||. +..++... .++.+|..+|.+.+...+......+....|+.
T Consensus 265 ~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 265 GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK 323 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSS
T ss_pred CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCC
No 500
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=63.49 E-value=25 Score=37.50 Aligned_cols=106 Identities=11% Similarity=0.007 Sum_probs=0.0
Q ss_pred CCeeEEEecCceEEEEeccCCeeeEEecCCCCc------ccccccCCCCCCceeeeccCCCceeeeeccccCceeeeccC
Q 004442 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPI------YSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSS 121 (753)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (753)
.+..++++.||+|.++|..+++....+....-- ...+.+.+..|..+...|....-.+..-..+.+.|..+.+
T Consensus 266 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~- 344 (435)
T 1p22_A 266 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF- 344 (435)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC-
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe-
Q ss_pred HHHHHHhCceeecCCeeeeeceeeeEEEEeccccc---------EEec-ccCCCC
Q 004442 122 AEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGR---------VVDN-YVLDFS 166 (753)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~~ 166 (753)
+...+..|+...++..-|..+|. .+.. ..+++.
T Consensus 345 ------------~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~ 387 (435)
T 1p22_A 345 ------------DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR 387 (435)
T ss_dssp ------------CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSC
T ss_pred ------------cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCC
Done!