Query 004443
Match_columns 753
No_of_seqs 477 out of 2067
Neff 5.7
Searched_HMMs 29240
Date Tue Mar 26 01:23:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004443.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004443hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zhx_A KES1 protein; oxysterol 100.0 9.8E-71 3.3E-75 611.8 24.3 282 426-731 9-331 (438)
2 2rsg_A Collagen type IV alpha- 99.9 1E-22 3.5E-27 179.0 11.0 92 94-223 2-93 (94)
3 3rcp_A Pleckstrin homology dom 99.9 1.2E-21 4.1E-26 174.5 11.4 95 95-227 1-96 (103)
4 2d9x_A Oxysterol binding prote 99.8 1.2E-20 4.1E-25 173.4 11.0 101 90-228 5-108 (120)
5 1v88_A Oxysterol binding prote 99.8 8.7E-20 3E-24 172.0 12.5 96 91-227 6-127 (130)
6 2dhk_A TBC1 domain family memb 99.8 1.4E-19 4.8E-24 166.4 13.2 99 91-229 6-109 (119)
7 1x1f_A Signal-transducing adap 99.8 1.7E-19 5.6E-24 174.1 12.7 95 91-225 16-114 (149)
8 2da0_A 130-kDa phosphatidylino 99.8 5.7E-19 1.9E-23 161.0 15.4 98 90-228 7-105 (114)
9 1wgq_A FYVE, rhogef and PH dom 99.8 1.1E-18 3.8E-23 157.0 14.5 96 90-225 5-104 (109)
10 2cod_A Centaurin-delta 1; ARF 99.8 1.4E-18 4.9E-23 157.8 14.9 96 90-227 5-102 (115)
11 1pls_A Pleckstrin homology dom 99.8 1.8E-18 6E-23 156.5 14.7 96 92-227 4-104 (113)
12 2d9v_A Pleckstrin homology dom 99.8 1.5E-18 5.1E-23 162.3 14.5 96 90-225 5-115 (130)
13 1v5u_A SBF1, SET binding facto 99.8 8.3E-19 2.8E-23 158.9 12.4 96 90-225 5-112 (117)
14 1v89_A Hypothetical protein KI 99.8 1.5E-18 5E-23 157.0 13.6 98 90-227 5-115 (118)
15 2rlo_A Centaurin-gamma 1; spli 99.8 8.1E-19 2.8E-23 163.3 11.6 111 92-225 3-125 (128)
16 1fgy_A GRP1; PH domain, signal 99.8 2.2E-18 7.4E-23 158.1 14.2 97 91-227 3-123 (127)
17 1fao_A Dual adaptor of phospho 99.8 2.2E-18 7.6E-23 158.8 13.9 99 90-228 15-116 (126)
18 1x05_A Pleckstrin; PH domain, 99.8 2.4E-18 8E-23 159.2 14.1 102 85-226 10-122 (129)
19 4a6h_A Phosphatidylinositol 4, 99.8 1.4E-18 4.6E-23 161.9 12.2 95 93-224 6-118 (120)
20 1wi1_A Calcium-dependent activ 99.8 1.1E-18 3.7E-23 163.5 11.5 96 92-227 7-113 (126)
21 3aj4_A Pleckstrin homology dom 99.8 7.8E-19 2.7E-23 158.5 9.6 95 90-224 2-111 (112)
22 1eaz_A Tandem PH domain contai 99.8 2.4E-18 8.1E-23 157.6 12.7 98 90-227 11-114 (125)
23 2dn6_A KIAA0640 protein; PH do 99.8 3E-18 1E-22 154.7 13.2 98 90-227 5-106 (115)
24 2i5f_A Pleckstrin; PH domain, 99.8 5.8E-18 2E-22 151.4 13.9 93 91-223 5-108 (109)
25 2dkp_A Pleckstrin homology dom 99.8 6.5E-18 2.2E-22 155.6 13.9 96 90-225 18-120 (128)
26 1u5d_A SKAP55, SRC kinase-asso 99.7 4.2E-18 1.4E-22 151.4 10.8 94 92-225 2-106 (108)
27 1upq_A PEPP1; PH domain, phosp 99.7 1.3E-17 4.3E-22 152.6 13.5 94 92-225 10-110 (123)
28 2d9y_A Pleckstrin homology dom 99.7 1.6E-17 5.6E-22 150.3 13.9 95 91-225 9-110 (117)
29 2yry_A Pleckstrin homology dom 99.7 1.9E-17 6.6E-22 151.1 14.3 95 91-225 20-121 (122)
30 1btk_A Bruton'S tyrosine kinas 99.7 5.8E-18 2E-22 166.2 11.1 100 92-227 2-135 (169)
31 2cof_A Protein KIAA1914; PH do 99.7 4.7E-18 1.6E-22 153.0 9.5 92 92-224 7-101 (107)
32 2y7b_A Actin-binding protein a 99.7 5.7E-18 1.9E-22 157.4 10.2 98 92-226 4-130 (134)
33 1unq_A RAC-alpha serine/threon 99.7 2.7E-18 9.2E-23 158.2 7.9 98 91-228 6-114 (125)
34 1x1g_A Pleckstrin 2; PH domain 99.7 8.5E-18 2.9E-22 155.2 11.2 96 90-224 15-124 (129)
35 2lul_A Tyrosine-protein kinase 99.7 1.5E-17 5.1E-22 162.2 13.5 98 92-228 14-125 (164)
36 1v5p_A Pleckstrin homology dom 99.7 7.1E-18 2.4E-22 158.0 10.7 99 93-227 15-123 (126)
37 1wg7_A Dedicator of cytokinesi 99.7 1.1E-17 3.6E-22 159.1 11.8 97 90-225 15-125 (150)
38 2coc_A FYVE, rhogef and PH dom 99.7 1.5E-17 5.2E-22 153.0 11.6 94 91-225 6-107 (112)
39 1u5f_A SRC-associated adaptor 99.7 1.8E-17 6.3E-22 157.5 12.2 97 91-227 15-122 (148)
40 1btn_A Beta-spectrin; signal t 99.7 2.1E-17 7.1E-22 147.1 11.7 94 95-222 1-106 (106)
41 2w2x_D 1-phosphatidylinositol- 99.7 1.7E-17 5.8E-22 154.3 11.0 104 91-225 10-120 (124)
42 2p0d_A RHO GTPase-activating p 99.7 5.3E-17 1.8E-21 152.1 13.3 109 91-228 10-128 (129)
43 3cxb_B Pleckstrin homology dom 99.7 4E-17 1.4E-21 149.2 12.2 93 94-226 1-103 (112)
44 1wjm_A Beta-spectrin III; PH d 99.7 5.1E-17 1.8E-21 149.6 12.0 104 90-227 5-120 (123)
45 1u5e_A SRC-associated adaptor 99.7 5.7E-17 2E-21 164.6 13.4 101 85-225 98-209 (211)
46 2j59_M RHO-GTPase activating p 99.7 1.5E-16 5.3E-21 154.2 11.0 95 93-225 3-112 (168)
47 1dyn_A Dynamin; signal transdu 99.7 2E-16 6.7E-21 147.2 10.7 91 92-222 11-115 (125)
48 3tfm_A Myosin X; split PH doma 99.7 2.1E-16 7.2E-21 161.9 11.0 97 89-225 54-156 (228)
49 2r09_A Cytohesin-3; autoinhibi 99.6 1.1E-15 3.9E-20 165.9 12.9 96 92-227 212-331 (347)
50 4h8s_A DCC-interacting protein 99.6 4.1E-16 1.4E-20 172.1 9.5 96 90-226 298-400 (407)
51 3a8p_A T-lymphoma invasion and 99.6 1.7E-15 6E-20 158.7 12.4 103 91-227 9-127 (263)
52 3lju_X ARF-GAP with dual PH do 99.6 1.2E-15 4.1E-20 168.0 11.2 95 91-225 267-373 (386)
53 2q13_A DCC-interacting protein 99.6 1.6E-15 5.4E-20 166.3 10.5 94 92-226 277-377 (385)
54 1qqg_A IRS-1, insulin receptor 99.6 2E-15 6.7E-20 158.4 10.2 97 91-226 8-114 (264)
55 1dro_A Beta-spectrin; cytoskel 99.6 3.2E-15 1.1E-19 137.8 8.7 103 91-225 6-120 (122)
56 3lju_X ARF-GAP with dual PH do 99.6 8.9E-15 3.1E-19 161.1 11.5 94 92-225 145-247 (386)
57 3tca_A Amyloid beta A4 precurs 99.5 1.9E-14 6.6E-19 150.5 11.4 94 90-223 165-275 (291)
58 2dtc_A RAL guanine nucleotide 99.5 2.9E-13 9.9E-18 127.0 14.0 103 94-227 2-115 (126)
59 2rov_A RHO-associated protein 99.5 4E-14 1.4E-18 131.1 7.9 93 95-224 3-115 (117)
60 3pp2_A RHO GTPase-activating p 99.5 2.4E-13 8.1E-18 126.4 12.3 105 92-224 7-123 (124)
61 2ys3_A UNC-112-related protein 99.5 7.5E-14 2.6E-18 131.9 8.4 94 92-223 8-111 (137)
62 2fjl_A 1-phosphatidylinositol- 99.4 3E-12 1E-16 123.0 12.4 128 94-224 2-148 (150)
63 4bbk_A Kindlin-1, fermitin fam 99.3 3.7E-12 1.3E-16 122.2 11.1 95 92-224 25-129 (165)
64 2d9w_A Docking protein 2; PH d 99.3 1.5E-11 5E-16 114.5 11.9 94 92-222 11-119 (127)
65 4ejn_A RAC-alpha serine/threon 99.3 5.5E-12 1.9E-16 139.4 10.3 95 92-226 5-110 (446)
66 4f7h_A Fermitin family homolog 99.3 1.4E-11 4.7E-16 119.4 11.5 95 93-225 47-151 (173)
67 1w1g_A HPDK1, 3-phosphoinositi 99.2 5.9E-11 2E-15 114.0 10.6 94 90-227 49-142 (151)
68 3a8n_A TIAM-1, T-lymphoma inva 99.1 5.2E-11 1.8E-15 125.6 8.8 102 91-226 9-126 (279)
69 3hk0_A Growth factor receptor- 99.1 1.5E-10 5.1E-15 120.8 11.9 96 90-225 129-241 (256)
70 4gmv_A RAS-associated and plec 99.1 1.4E-10 4.9E-15 122.4 11.0 98 91-225 156-267 (281)
71 2coa_A Protein kinase C, D2 ty 98.5 5E-07 1.7E-11 84.0 9.8 94 90-223 5-118 (125)
72 3tfm_A Myosin X; split PH doma 98.4 1.6E-07 5.5E-12 95.9 5.7 43 87-129 15-57 (228)
73 2d9z_A Protein kinase C, NU ty 98.4 4.1E-06 1.4E-10 78.2 13.1 95 90-224 5-123 (129)
74 2lg1_A A-kinase anchor protein 98.0 4.2E-05 1.5E-09 75.9 11.7 103 91-227 69-175 (185)
75 3mpx_A FYVE, rhogef and PH dom 97.6 0.00015 5.1E-09 80.0 10.0 94 93-226 244-339 (434)
76 1mai_A Phospholipase C delta-1 97.6 0.00034 1.2E-08 65.4 10.5 39 189-227 84-124 (131)
77 3t06_A PDZ-rhogef, RHO guanine 97.6 0.00053 1.8E-08 75.3 13.6 113 92-227 294-411 (418)
78 3p6a_A RHO guanine nucleotide 97.5 0.001 3.4E-08 71.9 14.0 113 92-227 258-374 (377)
79 1xcg_A PDZ-rhogef, RHO guanine 97.4 0.0013 4.5E-08 70.8 14.2 111 92-225 252-367 (368)
80 1zc3_B Exocyst complex protein 97.4 0.0019 6.5E-08 59.1 13.0 96 94-225 9-108 (113)
81 2vrw_B P95VAV, VAV1, proto-onc 97.4 0.0009 3.1E-08 73.3 12.0 96 93-227 234-338 (406)
82 1v61_A RAC/CDC42 guanine nucle 97.3 0.0009 3.1E-08 63.1 10.2 96 96-228 31-130 (132)
83 2pz1_A RHO guanine nucleotide 97.3 0.0012 4E-08 73.8 12.6 101 92-228 333-444 (466)
84 2dfk_A Collybistin II; DH doma 97.3 0.0012 4.1E-08 72.5 12.2 101 92-228 256-367 (402)
85 3odw_A RHO guanine nucleotide 97.3 0.0016 5.6E-08 74.3 13.7 113 92-227 411-527 (536)
86 3qwm_A Iqsec1, IQ motif and SE 97.3 0.0015 5.3E-08 62.0 10.8 88 106-227 30-125 (140)
87 1v5m_A SH2 and PH domain-conta 97.2 0.0015 5.2E-08 61.2 10.3 95 91-225 16-131 (136)
88 3ky9_A Proto-oncogene VAV; cal 97.2 0.0012 3.9E-08 76.2 11.2 96 93-227 406-510 (587)
89 1txd_A RHO guanine nucleotide 97.2 0.0026 9E-08 69.0 13.1 114 92-228 256-373 (385)
90 3ml4_A Protein DOK-7; tyrosine 97.2 0.0014 4.6E-08 66.6 9.9 93 93-223 9-112 (224)
91 1dbh_A Protein (human SOS 1); 97.1 0.0018 6.3E-08 69.4 11.5 101 92-225 246-350 (354)
92 1kz7_A Guanine nucleotide exch 97.1 0.0043 1.5E-07 66.8 13.8 105 92-226 209-327 (353)
93 1nty_A Triple functional domai 96.7 0.0089 3E-07 63.0 11.7 100 92-225 202-309 (311)
94 2rgn_B RHOA/RAC/CDC42 exchange 96.5 0.021 7.1E-07 61.5 13.2 103 92-225 206-319 (354)
95 3jzy_A Intersectin 2; C2 domai 96.3 0.00066 2.3E-08 76.1 0.0 108 93-226 253-364 (510)
96 2z0q_A XPLN, RHO guanine nucle 96.3 0.013 4.5E-07 62.5 10.1 92 93-224 232-346 (346)
97 2rr3_B OSBP, oxysterol-binding 95.4 0.012 4E-07 44.6 3.5 21 348-368 11-31 (47)
98 1foe_A T-lymphoma invasion and 95.1 0.15 5.2E-06 54.9 12.9 59 170-228 300-370 (377)
99 3ksy_A SOS-1, SON of sevenless 94.5 0.1 3.5E-06 64.2 10.6 100 92-224 443-546 (1049)
100 3v5w_A G-protein coupled recep 93.4 0.42 1.4E-05 56.2 12.3 96 92-229 558-657 (689)
101 1fho_A UNC-89; pleckstrin homo 89.7 0.75 2.6E-05 42.3 7.3 103 88-226 5-114 (119)
102 3zvr_A Dynamin-1; hydrolase, D 88.4 3.1 0.00011 49.5 13.2 90 93-222 540-643 (772)
103 1z87_A Alpha-1-syntrophin; pro 84.4 2.2 7.6E-05 44.3 8.0 52 173-224 205-262 (263)
104 3qr0_A Phospholipase C-beta (P 84.4 2.7 9.1E-05 50.4 9.7 35 190-224 103-142 (816)
105 2adz_A Alpha-1-syntrophin; pro 81.6 3.2 0.00011 40.8 7.4 52 173-224 120-177 (178)
106 3ohm_B 1-phosphatidylinositol- 76.3 8.6 0.00029 46.5 10.4 38 188-225 98-140 (885)
107 2zkm_X 1-phosphatidylinositol- 73.9 10 0.00035 45.3 10.1 36 190-225 96-136 (799)
108 3hie_A Protein PSL1, exocyst c 42.6 1.1E+02 0.0039 29.6 9.4 39 188-227 113-151 (171)
109 1gk7_A Vimentin; intermediate 39.1 26 0.00088 26.0 3.3 32 277-308 5-36 (39)
110 3ulb_A Target of rapamycin com 30.7 1.7E+02 0.0058 26.9 8.0 53 174-226 57-116 (121)
111 3hnw_A Uncharacterized protein 30.5 1.8E+02 0.0063 27.0 8.5 19 190-208 7-25 (138)
112 3sbu_A Hypothetical NTF2-like 27.9 42 0.0014 34.5 3.8 40 588-627 206-248 (261)
113 3a58_A Exocyst complex compone 26.0 2.4E+02 0.0084 29.8 9.2 38 188-226 183-220 (320)
No 1
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A
Probab=100.00 E-value=9.8e-71 Score=611.82 Aligned_cols=282 Identities=20% Similarity=0.288 Sum_probs=246.5
Q ss_pred ccchhHHHHhhccCC---CCCCcccccccccCCChhhhhhhcccchHHHHHHhhcC-------CCCC------HHHHHHH
Q 004443 426 KGVSLWAMIKDNIGK---DLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWG-------KRGN------TLMRILN 489 (753)
Q Consensus 426 ~~~slwsilK~~iGk---DLskIslPv~fnEP~S~LQrl~e~~eY~~LLd~Aa~~~-------~~~d------~~eRm~~ 489 (753)
.+.++|++++++||+ |||+|+|||+||||+|+||+++++++|++||+.|+... +..| |++||++
T Consensus 9 ~~~s~w~~~lK~i~k~g~DLSkIslPv~i~EP~SlLE~~~~~~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm~~ 88 (438)
T 1zhx_A 9 ASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLA 88 (438)
T ss_dssp TTSHHHHHHHHTTTTCCSCGGGSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHH
T ss_pred ccccHHHHHHHHhhhcCCChhhcccCchhcCCccHHHHHHHhhhhHHHHhhhhhcccccccccccCCccccCCHHHHHHH
Confidence 568999866666755 99999999999999999999999999999999998641 1238 9999999
Q ss_pred HHHHHhhhcccc-------CCCCCCCCCCCCCCeEEEEeCC-----CC-EEEEEEecccCCcceeEEEeCC--cEEEEEE
Q 004443 490 VAAFAVSGYAST-------EGRICKPFNPLLGETYEADYPD-----KG-LQFFSEKVSHHPMIVACHCQGT--GWKFWGD 554 (753)
Q Consensus 490 V~aF~vS~y~~~-------~~r~~KPfNPiLGETfe~~~~d-----~g-~r~iaEQVSHHPPIsA~~~e~~--g~~~~g~ 554 (753)
|++|+||+|++. .++.+|||||||||||||.|+| .| ++|||||||||||||||||+++ ||+++|+
T Consensus 89 V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~g~ 168 (438)
T 1zhx_A 89 VTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGY 168 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEE
T ss_pred HHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEEEE
Confidence 999999998753 2688999999999999999986 46 8999999999999999999984 8999999
Q ss_pred eeeeEEEEee-EEEEEeeeEEEEEeCCceeeeecccceeeeeecccceeeeeeeeEEEEcCCcceEEEEEeecccccCCC
Q 004443 555 SNLKSKFWGR-SIQLDPVGVLTLEFDDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRNP 633 (753)
Q Consensus 555 ~~~kskF~G~-si~v~~~G~~~l~f~~gE~Y~~~~ptt~i~nii~G~~~~e~~G~~~I~~~tg~~~~i~F~~k~~fg~~~ 633 (753)
+.+++||||+ ||+|.+.|.++|+|. ||+|+|++|+++|+|||+|++|+|++|+|.|+|+||++|+|+|+++|||||+.
T Consensus 169 ~~~kskF~G~~Sv~v~~~G~~~l~l~-~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~~tg~~~~l~F~~kg~f~g~~ 247 (438)
T 1zhx_A 169 NQIKASFTKSLMLTVKQFGHTMLDIK-DESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKK 247 (438)
T ss_dssp EEEEEEECTTCCEEEEEECCEEEEET-TEEEEEECCCEEEECTTTTCCEEEECSEEEEEETTSCEEEEEEECSSSSCSSS
T ss_pred eeeEEEEcCceEEEEEcceEEEEEEC-CcEEEEecCcEEEEEEEecceeEecCCeEEEEcCCCCEEEEEEcCCCCcCCCc
Confidence 9999999999 999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECC------CCcEEEEEeeeecceEEEEeCcCCCCCccccCCCCceEeeccCCCCCCCCCCCCcccccccccC
Q 004443 634 HQVHGIVQDR------NGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLWKRSKPPKYPTRYNFTRFAITLNEV 707 (753)
Q Consensus 634 ~~V~G~V~d~------~g~~~~~i~G~Wd~~l~~~~~~~~~k~~~~~~~~~~~~lW~~~~~p~~~~~y~ft~fa~~LNe~ 707 (753)
|.|+|+|++. +|+++++|.|+|++.|++.+.... ....++|.+++.|..+ + .+
T Consensus 248 n~v~G~I~~~~~~~~~~~~~l~~i~G~W~~~l~i~~~~~~---------~~~~~~~~~~~~~~~~-----------~-~v 306 (438)
T 1zhx_A 248 NSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK---------EESRLFYDAARIPAEH-----------L-NV 306 (438)
T ss_dssp SEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG---------GGCEEEEETTTSCCCC-----------C-BC
T ss_pred cEEEEEEEcCCcccCCCCcEEEEEEEEEcceEEEEeCCCC---------ccceEEeccCCCCCcc-----------c-cC
Confidence 9999999984 678999999999999999765321 1257999998865421 1 12
Q ss_pred CcCCcccCCCCCCCC--Cccccc-ccc
Q 004443 708 TPGLKVIILTASLHF--SYMHTL-SLT 731 (753)
Q Consensus 708 ~~~~~~~LppTDSRl--Rpd~~l-~~~ 731 (753)
.| .+.++|||||+ ||||++ +-|
T Consensus 307 ~p--~e~q~ptdSR~~Wr~d~~ale~G 331 (438)
T 1zhx_A 307 KP--LEEQHPLESRKAWYDVAGAIKLG 331 (438)
T ss_dssp CC--GGGCCTTBHHHHTHHHHHHHHHT
T ss_pred CC--hhhCCCcccchhhHHHHHHHHcC
Confidence 22 23468999997 999996 443
No 2
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.88 E-value=1e-22 Score=178.99 Aligned_cols=92 Identities=35% Similarity=0.614 Sum_probs=83.8
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCCcc
Q 004443 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (753)
Q Consensus 94 ~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~kp~ 173 (753)
.++|||+|+|+..|+||+|||||+++.|+||+++.+ ...+|.
T Consensus 2 ~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~--------------------------------------~~~~~~ 43 (94)
T 2rsg_A 2 ERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDE--------------------------------------TEYGCR 43 (94)
T ss_dssp CEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTG--------------------------------------GGTCCS
T ss_pred CEEEEEEEeCCCCCCceEEEEEEECCEEEEEEeccc--------------------------------------ccccce
Confidence 579999999999999999999999999999997543 123478
Q ss_pred cEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 004443 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (753)
Q Consensus 174 G~I~L~~ssi~~~~~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~ 223 (753)
|.|+|..+.+.....++..|.|.+++|+|+|+|+|++|+++||+||+.|+
T Consensus 44 ~~i~l~~~~~~~~~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 44 GSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp EEEETTTCEEEECSSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHHC
T ss_pred eeEecceeeeecCcccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhhc
Confidence 99999999998888889999999999999999999999999999999985
No 3
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.86 E-value=1.2e-21 Score=174.48 Aligned_cols=95 Identities=34% Similarity=0.747 Sum_probs=84.5
Q ss_pred EEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCCccc
Q 004443 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (753)
Q Consensus 95 ~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~kp~G 174 (753)
++|||+|+++..++||+|||||+++.|+||+++.+. ..+|+|
T Consensus 1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~--------------------------------------~~~~~g 42 (103)
T 3rcp_A 1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDV--------------------------------------CKGSKG 42 (103)
T ss_dssp CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC-----------------------------------------CCCSC
T ss_pred CceEEEEccCCCCCeeceEEEEECCEEEEEecCCcc--------------------------------------cCCccc
Confidence 589999999999999999999999999999986531 124789
Q ss_pred EEEcCceEEEecCCCCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 175 EVHLKVSSIRDSKSDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 175 ~I~L~~ssi~~~~~d~~rF~I~t~-tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
.|+|..++|.....++..|.|.++ .|+|+|+|+|++|+++||.||+.|+....
T Consensus 43 ~i~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~~~ 96 (103)
T 3rcp_A 43 SIKMAVCEIKVHSADNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKASLT 96 (103)
T ss_dssp EEEGGGCEEECCTTCSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCCCC
T ss_pred EEEeeeeEEEEcCCCCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 999999999888788899999986 89999999999999999999999987654
No 4
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=173.39 Aligned_cols=101 Identities=30% Similarity=0.562 Sum_probs=87.6
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccc
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~--~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~ 167 (753)
...+.++|||+|+++..++||+|||||+ ++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~-------------------------------------- 46 (120)
T 2d9x_A 5 SSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQS-------------------------------------- 46 (120)
T ss_dssp CSCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGG--------------------------------------
T ss_pred CCCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcc--------------------------------------
Confidence 3456789999999999999999999998 699999998543
Q ss_pred cCCCcccEEEcCceEEEecCCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 168 LNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~~~d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
...+|+|.|+|..++|.....+...|.|.++. |+|+|+|+|++|+++||+||+.|+.....
T Consensus 47 ~~~~~~g~I~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (120)
T 2d9x_A 47 RNQKPRGTLQLAGAVISPSDEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTE 108 (120)
T ss_dssp SSSCCSEEEECTTCCEECCSSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccceEEcceEEEEecCCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhh
Confidence 11248999999999988776778899999986 99999999999999999999999887654
No 5
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.81 E-value=8.7e-20 Score=171.97 Aligned_cols=96 Identities=29% Similarity=0.384 Sum_probs=80.8
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
....++|||+|++ ..|+||+|||||+++.|+|||++.+ .
T Consensus 6 ~~v~k~GwL~K~g-~~k~WkrRWfVLk~~~L~yyk~~~~----------------------------------------~ 44 (130)
T 1v88_A 6 SGIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQKN----------------------------------------G 44 (130)
T ss_dssp SSCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSSS----------------------------------------C
T ss_pred CceEEEeEEEEeC-CCCCceEEEEEEECCEEEEECCCCC----------------------------------------C
Confidence 3567899999998 8899999999999999999998653 2
Q ss_pred CcccEEEcCceEEEecCCC--CCcEEEEeCC------------------------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 171 KPFGEVHLKVSSIRDSKSD--DKRFSIFTGT------------------------KRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d--~~rF~I~t~t------------------------kt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
+|.|.|.|..++|.+..++ ...|.|.++. ++|+|+|+|++|+++||+||+.|+.
T Consensus 45 ~p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 45 QWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp CCCEEEECSSCEECCCCTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred CceEEEEcCCCEEEECCCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 4899999999998765443 3578888753 4599999999999999999999988
Q ss_pred hcc
Q 004443 225 MFP 227 (753)
Q Consensus 225 ~~~ 227 (753)
+-+
T Consensus 125 ~~~ 127 (130)
T 1v88_A 125 SGP 127 (130)
T ss_dssp TTT
T ss_pred cCC
Confidence 644
No 6
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=1.4e-19 Score=166.43 Aligned_cols=99 Identities=23% Similarity=0.475 Sum_probs=84.8
Q ss_pred CCccEEEEEEeecC--CCCCceeeEEEEeCC--eEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccc
Q 004443 91 VGNGISGVLYKWVN--YGKGWRPRWFVLQDG--VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (753)
Q Consensus 91 ~~~~~eG~L~K~~n--~~kgWk~RWFVL~~g--~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~ 166 (753)
.++.++|||+|++. ..++||+|||||+++ .|+||+++.+
T Consensus 6 ~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~------------------------------------- 48 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQD------------------------------------- 48 (119)
T ss_dssp SCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTC-------------------------------------
T ss_pred CCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCC-------------------------------------
Confidence 45678999999986 789999999999998 9999997553
Q ss_pred ccCCCcccEEEcCceEEEecC-CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 004443 167 LLNRKPFGEVHLKVSSIRDSK-SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (753)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~-~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~~~ 229 (753)
.+|+|.|+|..+++.... .....|.|.++.|+|+|+|+|++|+++||+||+.|+..+...
T Consensus 49 ---~~~~g~I~L~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 49 ---ANPLDSIDLSSAVFDCKADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp ---CSCSEEEEGGGCEEEECTTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred ---cccccEEECCCCEEEecCCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 248999999988866542 336789999999999999999999999999999999877543
No 7
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=1.7e-19 Score=174.12 Aligned_cols=95 Identities=13% Similarity=0.200 Sum_probs=81.1
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
.+..++|||+|+++..++||+|||||+++.|+|||++.+ .
T Consensus 16 ~pv~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d----------------------------------------~ 55 (149)
T 1x1f_A 16 LPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKS----------------------------------------I 55 (149)
T ss_dssp SCEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSC----------------------------------------S
T ss_pred CCccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCc----------------------------------------c
Confidence 347889999999999999999999999999999998654 2
Q ss_pred CcccEEEcCceEEEec--CCC--CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 171 KPFGEVHLKVSSIRDS--KSD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 171 kp~G~I~L~~ssi~~~--~~d--~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+.|.|+|..+++..+ ..+ ...|.|.++.|+|+|+|+|.+||++||.||+.++..
T Consensus 56 ~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 56 IYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp SCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHS
T ss_pred ccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence 3679999988876522 212 457999999999999999999999999999999874
No 8
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=5.7e-19 Score=160.97 Aligned_cols=98 Identities=21% Similarity=0.369 Sum_probs=84.5
Q ss_pred CCCccEEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 90 IVGNGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~-kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
..++.++|||+|++... +.||+|||||+++.|+||+++.+
T Consensus 7 ~~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~--------------------------------------- 47 (114)
T 2da0_A 7 GYGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSN--------------------------------------- 47 (114)
T ss_dssp CCCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCC---------------------------------------
T ss_pred CCCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCC---------------------------------------
Confidence 34678999999999755 99999999999999999997432
Q ss_pred CCCcccEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 169 NRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
++.|.|.|..+.|.........|.|.++.|+|+|+|+|++|+.+||.||+.|+....+
T Consensus 48 --~~~~~i~l~~~~v~~~~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 105 (114)
T 2da0_A 48 --RQPAKLNLLTCQVKPNAEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALT 105 (114)
T ss_dssp --SCCEEEETTTSEEEECSSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHT
T ss_pred --CCCCEEEeeeeEEEECCCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Confidence 2567788888888776666789999999999999999999999999999999987654
No 9
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.79 E-value=1.1e-18 Score=157.00 Aligned_cols=96 Identities=22% Similarity=0.360 Sum_probs=81.3
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
...+.++|||+|+++..++||+|||||+++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~---------------------------------------- 44 (109)
T 1wgq_A 5 SSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASED---------------------------------------- 44 (109)
T ss_dssp CCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTC----------------------------------------
T ss_pred CCCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCc----------------------------------------
Confidence 3456789999999999999999999999999999997553
Q ss_pred CCcccEEEcCceEEEecCCC---CCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 170 RKPFGEVHLKVSSIRDSKSD---DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d---~~rF~I~t~-tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|.|.|+|..+++...... +..|.|.++ .|+|+|+|+|++|+++||.||+.|...
T Consensus 45 ~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~~ 104 (109)
T 1wgq_A 45 VAALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVS 104 (109)
T ss_dssp SSCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred CccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 23789999999987665433 367999877 478999999999999999999998653
No 10
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.79 E-value=1.4e-18 Score=157.75 Aligned_cols=96 Identities=24% Similarity=0.353 Sum_probs=82.1
Q ss_pred CCCccEEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 90 IVGNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n-~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
.....++|||+|++. ..++||+|||||+++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~--------------------------------------- 45 (115)
T 2cod_A 5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKE--------------------------------------- 45 (115)
T ss_dssp CSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCC---------------------------------------
T ss_pred CCCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCC---------------------------------------
Confidence 345678999999998 7899999999999999999998553
Q ss_pred CCCcccEEEcCceE-EEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 169 NRKPFGEVHLKVSS-IRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 169 ~~kp~G~I~L~~ss-i~~~~~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
.+|+|.|+|..++ |.. .++..|.|.++.|+|+|+|+|++|+++||.||+.++...+
T Consensus 46 -~~~~g~i~l~~~~~v~~--~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~~~ 102 (115)
T 2cod_A 46 -MYSKGIIPLSAISTVRV--QGDNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQS 102 (115)
T ss_dssp -SSCCCEEETTTEEEEEE--ETTTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHHHHS
T ss_pred -cccCCEEECCcceEEEe--CCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHhCc
Confidence 2378999998875 433 2378999999999999999999999999999999986544
No 11
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=1.8e-18 Score=156.47 Aligned_cols=96 Identities=24% Similarity=0.362 Sum_probs=82.0
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.+.++|||+|+++..++||+|||||+++.|+||+++.+ .+
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------------------------------~~ 43 (113)
T 1pls_A 4 KRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSD----------------------------------------NS 43 (113)
T ss_dssp CCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTC----------------------------------------SS
T ss_pred CCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCCC----------------------------------------CC
Confidence 46789999999999999999999999999999997543 24
Q ss_pred cccEEEcCceEEEec-C---CCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 172 PFGEVHLKVSSIRDS-K---SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 172 p~G~I~L~~ssi~~~-~---~d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
|+|.|+|..+++... . .....|.|.++. |+|+|+|+|++|+++||.||+.++....
T Consensus 44 ~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 44 PKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp CSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred cceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 899999999887541 1 224579999875 9999999999999999999999998754
No 12
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=1.5e-18 Score=162.27 Aligned_cols=96 Identities=30% Similarity=0.504 Sum_probs=75.7
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL-~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
.....++|||+|+++..|+||+||||| +++.|+||+++.+.
T Consensus 5 ~~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~~-------------------------------------- 46 (130)
T 2d9v_A 5 SSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQ-------------------------------------- 46 (130)
T ss_dssp CCCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSSTT--------------------------------------
T ss_pred CCceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCCC--------------------------------------
Confidence 345678999999999999999999999 89999999986541
Q ss_pred CCCcccEEEcCce--EEEe-----------cCCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 169 NRKPFGEVHLKVS--SIRD-----------SKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 169 ~~kp~G~I~L~~s--si~~-----------~~~d~~rF~I~t-~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
++.|.|.|... .|.. .......|.|.+ ..|+|+|+|+|++|+++||+||+.|+..
T Consensus 47 --~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 47 --DEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANST 115 (130)
T ss_dssp --SEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred --CcCceEecccceeEEeccccccccCCCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 24566666531 1221 112356899999 4599999999999999999999999864
No 13
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.78 E-value=8.3e-19 Score=158.88 Aligned_cols=96 Identities=23% Similarity=0.412 Sum_probs=81.3
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccc
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~--~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~ 167 (753)
...+.++|||+|+++..++||+|||||. ++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~-------------------------------------- 46 (117)
T 1v5u_A 5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMD-------------------------------------- 46 (117)
T ss_dssp CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSC--------------------------------------
T ss_pred cCCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCC--------------------------------------
Confidence 4467899999999999999999999999 899999997543
Q ss_pred cCCCcccEEEcCceEEEecC----------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 168 LNRKPFGEVHLKVSSIRDSK----------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~~----------~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|+|.|+|..+.+.... .....|.|.++.|+|+|+|+|++|+++||+||+.|+..
T Consensus 47 --~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 112 (117)
T 1v5u_A 47 --TECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSS 112 (117)
T ss_dssp --SSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCCC
T ss_pred --CccceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhcc
Confidence 238899999988754321 12368999999999999999999999999999998654
No 14
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=1.5e-18 Score=156.98 Aligned_cols=98 Identities=29% Similarity=0.391 Sum_probs=83.0
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
...+.++|||+|++...+.||+|||||.++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 44 (118)
T 1v89_A 5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEED---------------------------------------- 44 (118)
T ss_dssp SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSC----------------------------------------
T ss_pred CCCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCC----------------------------------------
Confidence 3457889999999999999999999999999999997543
Q ss_pred CCcccEEEcCceEEEecC---C--CCCcEEEEe--------CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 170 RKPFGEVHLKVSSIRDSK---S--DDKRFSIFT--------GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~---~--d~~rF~I~t--------~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
.+|+|.|+|..+++.... . ....|.|.+ +.|+|+|+|+|++|+++||.||+.|+...+
T Consensus 45 ~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~~ 115 (118)
T 1v89_A 45 TKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGP 115 (118)
T ss_dssp CSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCCS
T ss_pred CCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHccCC
Confidence 248999999999876432 1 245788988 789999999999999999999999988543
No 15
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.77 E-value=8.1e-19 Score=163.31 Aligned_cols=111 Identities=22% Similarity=0.258 Sum_probs=76.4
Q ss_pred CccEEEEEEee-cC-CCCCceeeEEEEe-CCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 92 GNGISGVLYKW-VN-YGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 92 ~~~~eG~L~K~-~n-~~kgWk~RWFVL~-~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
.+.++|||+|+ ++ ..|+||+|||||+ +|.|+||++..+. + ... ..+.|... . ..
T Consensus 3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~---~-~~~--~~~~i~l~---~--------------~~ 59 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDY---I-HST--HGKEMDLL---R--------------TT 59 (128)
T ss_dssp CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHH---H-HTC--SCEEEESS---S--------------CE
T ss_pred cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhh---c-ccc--CCCeeeee---e--------------eE
Confidence 46789999999 54 7899999999998 5899999863220 0 000 00000000 0 00
Q ss_pred CCCcccEEEcCceEEEec--------CCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 169 NRKPFGEVHLKVSSIRDS--------KSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~--------~~d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
...|.|.|.|..+++.+. ..+...|.|++++ |+|+|+|+|++||++||+||+.++..
T Consensus 60 ~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 60 VKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp EECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EecCCCccccccccccccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 112667777777665421 1346789999987 99999999999999999999999865
No 16
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.77 E-value=2.2e-18 Score=158.10 Aligned_cols=97 Identities=26% Similarity=0.482 Sum_probs=82.6
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
..+.++|||+|+++..++||+|||||+++.|+||+++.+ .
T Consensus 3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------------------------------~ 42 (127)
T 1fgy_A 3 FNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------------K 42 (127)
T ss_dssp SSCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------S
T ss_pred CCCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCCC----------------------------------------C
Confidence 457899999999999999999999999999999997543 2
Q ss_pred CcccEEEcCceEEEecCCC--CCcEEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 171 KPFGEVHLKVSSIRDSKSD--DKRFSIFTG----------------------TKRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d--~~rF~I~t~----------------------tkt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
+|+|.|+|..+++...... ...|.|.++ .|+|+|+|+|++|+++||.||+.++...
T Consensus 43 ~~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 122 (127)
T 1fgy_A 43 EPRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 122 (127)
T ss_dssp SCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred CcceEEECCceEEEEccCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccC
Confidence 4899999999987664433 567888765 3799999999999999999999999865
Q ss_pred c
Q 004443 227 P 227 (753)
Q Consensus 227 ~ 227 (753)
+
T Consensus 123 ~ 123 (127)
T 1fgy_A 123 P 123 (127)
T ss_dssp T
T ss_pred C
Confidence 4
No 17
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.77 E-value=2.2e-18 Score=158.75 Aligned_cols=99 Identities=22% Similarity=0.300 Sum_probs=83.5
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
...+.++|||+|+++..++||+|||||.++.|+||+++.+
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 54 (126)
T 1fao_A 15 PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMS---------------------------------------- 54 (126)
T ss_dssp CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------
T ss_pred CCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCCC----------------------------------------
Confidence 3467899999999999999999999999999999997543
Q ss_pred CCcccEEEcCceE-EEecCC--CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 170 RKPFGEVHLKVSS-IRDSKS--DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 170 ~kp~G~I~L~~ss-i~~~~~--d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
.+|+|.|+|..+. +..... ....|.|.++.|+|+|+|+|++|+++||.||+.++....+
T Consensus 55 ~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 116 (126)
T 1fao_A 55 PEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQIRK 116 (126)
T ss_dssp SSCSEEEEGGGCCEEEEECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred CCceeEEEccceEEEEecccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHHHh
Confidence 2489999999988 443322 3568999999999999999999999999999999987554
No 18
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.77 E-value=2.4e-18 Score=159.20 Aligned_cols=102 Identities=27% Similarity=0.442 Sum_probs=83.9
Q ss_pred ccccCCCCccEEEEEEeecCCCCCceeeEEEEeCC--eEEEEeecCCCccccchhccccceeeccchhhhhhhccccccc
Q 004443 85 VKINDIVGNGISGVLYKWVNYGKGWRPRWFVLQDG--VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKET 162 (753)
Q Consensus 85 ~~~~~~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g--~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~ 162 (753)
.+......+.++|||+|++...++||+|||||.++ .|+||+++.+
T Consensus 10 ~~~~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~--------------------------------- 56 (129)
T 1x05_A 10 LKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGA--------------------------------- 56 (129)
T ss_dssp CCSTTCSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCC---------------------------------
T ss_pred EcccccCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCC---------------------------------
Confidence 33344556789999999999999999999999865 9999997533
Q ss_pred ccccccCCCcccEEEcCceEEEecCC--------CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 163 TSQRLLNRKPFGEVHLKVSSIRDSKS--------DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 163 ~~~~~~~~kp~G~I~L~~ssi~~~~~--------d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
.+|+|.|+|..++|..... ....|.|.++. ++|+|+|+|++|+++||.||+.++...
T Consensus 57 -------~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 57 -------EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp -------SSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred -------CcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 2489999999988764322 35679999975 779999999999999999999998754
No 19
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.77 E-value=1.4e-18 Score=161.86 Aligned_cols=95 Identities=17% Similarity=0.354 Sum_probs=80.1
Q ss_pred ccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCCc
Q 004443 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (753)
Q Consensus 93 ~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~kp 172 (753)
+.++|||+|++++.|+|++|||||.++.|+|||++... +...|
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~~-------------------------------------~d~~P 48 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADRK-------------------------------------KDLVP 48 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCTT-------------------------------------TCCSC
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCcC-------------------------------------cCCCc
Confidence 78899999999999999999999999999999985431 22348
Q ss_pred ccEEEcCceEEEecCC-----------CCCcEEEEeCC-------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 173 FGEVHLKVSSIRDSKS-----------DDKRFSIFTGT-------KRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 173 ~G~I~L~~ssi~~~~~-----------d~~rF~I~t~t-------kt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
.|.|.|..|+|..... ....|.|.+.. ++|+|+|+|.+||++||+||+.+..
T Consensus 49 ~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 49 VMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp SEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred eEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 9999999999887432 34579888754 6999999999999999999998854
No 20
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=1.1e-18 Score=163.49 Aligned_cols=96 Identities=18% Similarity=0.283 Sum_probs=79.4
Q ss_pred CccEEEEEEeecC-CCCCceeeEEEEeCCeEEEEe----ecCCCccccchhccccceeeccchhhhhhhccccccccccc
Q 004443 92 GNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYK----IHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (753)
Q Consensus 92 ~~~~eG~L~K~~n-~~kgWk~RWFVL~~g~LsYYk----~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~ 166 (753)
+..++|||+|+|. ..|.||+|||||.+..|+||| ++.+
T Consensus 7 n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~------------------------------------- 49 (126)
T 1wi1_A 7 GMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKK------------------------------------- 49 (126)
T ss_dssp CEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSS-------------------------------------
T ss_pred CCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEcccccccC-------------------------------------
Confidence 3568999999986 569999999999999999999 4332
Q ss_pred ccCCCcccEEEcCceEEEecC--C----CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 167 LLNRKPFGEVHLKVSSIRDSK--S----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~--~----d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
.+|.|.|.|..++|.... + ....|.|++++++|+|.|+|++||++||+||+.|.....
T Consensus 50 ---~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~~~~ 113 (126)
T 1wi1_A 50 ---AEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSH 113 (126)
T ss_dssp ---SCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTCSS
T ss_pred ---CCCceEEECCCcEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhcccc
Confidence 348999999999987421 1 234678889999999999999999999999999986443
No 21
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.77 E-value=7.8e-19 Score=158.53 Aligned_cols=95 Identities=28% Similarity=0.430 Sum_probs=74.5
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL-~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
...+.++|||+|+++..++||+||||| .++.|+||+++.+.
T Consensus 2 ~~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~~-------------------------------------- 43 (112)
T 3aj4_A 2 SMAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQ-------------------------------------- 43 (112)
T ss_dssp CCSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTCC--------------------------------------
T ss_pred CcceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCCC--------------------------------------
Confidence 456789999999999999999999999 89999999986541
Q ss_pred CCCcccEEEcCceEEE-----------ecCCC--CCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 169 NRKPFGEVHLKVSSIR-----------DSKSD--DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 169 ~~kp~G~I~L~~ssi~-----------~~~~d--~~rF~I~t~-tkt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
++.|.|+|...+|. ..... +..|.|.++ .|+|+|+|+|++|+++||.||+.|+.
T Consensus 44 --~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 44 --NIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp --SEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred --CCCccccccccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 24566666543321 11111 347999875 89999999999999999999999974
No 22
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=2.4e-18 Score=157.65 Aligned_cols=98 Identities=21% Similarity=0.382 Sum_probs=83.0
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
.....++|||+|+++..++||+|||||.++.|+||+++.+
T Consensus 11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 50 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELE---------------------------------------- 50 (125)
T ss_dssp -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTC----------------------------------------
T ss_pred CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCC----------------------------------------
Confidence 3467899999999999999999999999999999997543
Q ss_pred CCcccEEEcCceE-EEecC-----CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 170 RKPFGEVHLKVSS-IRDSK-----SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 170 ~kp~G~I~L~~ss-i~~~~-----~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
.+|+|.|+|..+. |.... .....|.|.++.|+|+|+|+|++|+++||.||+.++....
T Consensus 51 ~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~~ 114 (125)
T 1eaz_A 51 KEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQR 114 (125)
T ss_dssp SSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred CcceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 2478999998875 33321 3367899999999999999999999999999999998754
No 23
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=3e-18 Score=154.68 Aligned_cols=98 Identities=20% Similarity=0.413 Sum_probs=82.5
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
.....++|||+|+++..++||+|||||.++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 44 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDL---------------------------------------- 44 (115)
T ss_dssp CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTC----------------------------------------
T ss_pred CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCC----------------------------------------
Confidence 3456789999999999999999999999999999997543
Q ss_pred CCcccEEEcCc-eEEEecCC---CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 170 RKPFGEVHLKV-SSIRDSKS---DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 170 ~kp~G~I~L~~-ssi~~~~~---d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
.+|+|.|+|.. +.|....+ ....|.|.++.|+|+|+|+|++|+++||.||+.++....
T Consensus 45 ~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 106 (115)
T 2dn6_A 45 KDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLK 106 (115)
T ss_dssp SSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHh
Confidence 23789999986 44544322 246899999999999999999999999999999998654
No 24
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.76 E-value=5.8e-18 Score=151.42 Aligned_cols=93 Identities=29% Similarity=0.519 Sum_probs=78.4
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEeCC--eEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDG--VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~~g--~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
..+.++|||+|++...++||+|||||.++ .|+||+++.+
T Consensus 5 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~--------------------------------------- 45 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGA--------------------------------------- 45 (109)
T ss_dssp CCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSC---------------------------------------
T ss_pred CceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCCC---------------------------------------
Confidence 35678999999999999999999999976 9999987432
Q ss_pred CCCcccEEEcCceEEEecCC--------CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 004443 169 NRKPFGEVHLKVSSIRDSKS--------DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVK 223 (753)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~--------d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~ 223 (753)
.+|+|.|+|..++|..... ....|.|.++. ++|+|+|+|++|+++||.||+.|+
T Consensus 46 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 46 -EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp -SSCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 2489999999988754322 35789999985 679999999999999999999986
No 25
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.75 E-value=6.5e-18 Score=155.60 Aligned_cols=96 Identities=24% Similarity=0.297 Sum_probs=80.7
Q ss_pred CCCccEEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 90 IVGNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n-~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
.....++|||+|++. ..++||+|||||+++.|+||+++.+
T Consensus 18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~--------------------------------------- 58 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKE--------------------------------------- 58 (128)
T ss_dssp TSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTC---------------------------------------
T ss_pred CCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCC---------------------------------------
Confidence 345679999999987 7899999999999999999997543
Q ss_pred CCCcccEEEcCceEEEecC-----CCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 169 NRKPFGEVHLKVSSIRDSK-----SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~-----~d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|+|.|+|..+.|.... .....|.|.++. |+|+|+|+|++|+++||+||+.|...
T Consensus 59 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 59 -EGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp -CSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred -cccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 237899999988876543 224579999874 99999999999999999999998753
No 26
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=4.2e-18 Score=151.38 Aligned_cols=94 Identities=20% Similarity=0.403 Sum_probs=79.3
Q ss_pred CccEEEEEEeecCC----CCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccc
Q 004443 92 GNGISGVLYKWVNY----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (753)
Q Consensus 92 ~~~~eG~L~K~~n~----~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~ 167 (753)
.+.++|||+|++.. .++|++|||||+++.|+||+++.+
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~-------------------------------------- 43 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKS-------------------------------------- 43 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTC--------------------------------------
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCC--------------------------------------
Confidence 35789999999743 289999999999999999997543
Q ss_pred cCCCcccEEEcCceEEEecC---C---CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 168 LNRKPFGEVHLKVSSIRDSK---S---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~~---~---d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|+|.|+|..+++.... . ....|.|.++. |+|+|+|+|++|+++||.||+.|+..
T Consensus 44 --~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 44 --KQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp --SSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 248999999999976642 1 24679999987 99999999999999999999999875
No 27
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.74 E-value=1.3e-17 Score=152.59 Aligned_cols=94 Identities=30% Similarity=0.372 Sum_probs=78.9
Q ss_pred CccEEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 92 GNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 92 ~~~~eG~L~K~~n-~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
...++|||+|++. ..++||+|||||.++.|+||+++.+ .
T Consensus 10 ~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~----------------------------------------~ 49 (123)
T 1upq_A 10 PVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSRE----------------------------------------E 49 (123)
T ss_dssp CEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------C
T ss_pred CceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCC----------------------------------------c
Confidence 4678999999984 7899999999999999999997543 2
Q ss_pred CcccEEEcCceEEEecCC-----CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 171 KPFGEVHLKVSSIRDSKS-----DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 171 kp~G~I~L~~ssi~~~~~-----d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
+|.|.|+|..+.|..... ....|.|.+++ |+|+|+|+|++|+++||.||+.|+..
T Consensus 50 ~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 50 SVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp SCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred ccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 478999999998876542 23456777776 99999999999999999999999864
No 28
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.6e-17 Score=150.34 Aligned_cols=95 Identities=26% Similarity=0.449 Sum_probs=79.2
Q ss_pred CCccEEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 91 ~~~~~eG~L~K~~-n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
....++|||+|++ +..+.||+|||||.++.|+||+++.+
T Consensus 9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 48 (117)
T 2d9y_A 9 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE---------------------------------------- 48 (117)
T ss_dssp CCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTC----------------------------------------
T ss_pred CCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCC----------------------------------------
Confidence 3567899999998 57899999999999999999997543
Q ss_pred CCcccEEEcCceEEEecCC-----CCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 170 RKPFGEVHLKVSSIRDSKS-----DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~-----d~~rF~I~t-~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|+|.|+|..++|..... ....|.|.+ +.|+|+|+|+|++|+++||.||+.|+..
T Consensus 49 ~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 110 (117)
T 2d9y_A 49 ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARV 110 (117)
T ss_dssp CSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTTCC
T ss_pred CCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHhh
Confidence 2478999999988764421 244788865 5799999999999999999999999764
No 29
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.9e-17 Score=151.14 Aligned_cols=95 Identities=26% Similarity=0.449 Sum_probs=78.5
Q ss_pred CCccEEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 91 ~~~~~eG~L~K~~-n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
....++|||+|++ +..++||+|||||.++.|+||+++.+
T Consensus 20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 59 (122)
T 2yry_A 20 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE---------------------------------------- 59 (122)
T ss_dssp CCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------
T ss_pred CCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCC----------------------------------------
Confidence 3567899999998 57899999999999999999997543
Q ss_pred CCcccEEEcCceEEEecCC-----CCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 170 RKPFGEVHLKVSSIRDSKS-----DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~-----d~~rF~I~t-~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|+|.|+|..++|..... ....|.|.+ +.|+|+|+|+|++|+++||.||+.|+.+
T Consensus 60 ~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 121 (122)
T 2yry_A 60 ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARV 121 (122)
T ss_dssp CSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHCC
T ss_pred CCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 2478999999887654321 245788875 5799999999999999999999999753
No 30
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.74 E-value=5.8e-18 Score=166.20 Aligned_cols=100 Identities=16% Similarity=0.182 Sum_probs=78.2
Q ss_pred CccEEEEEEeecC-----CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccc
Q 004443 92 GNGISGVLYKWVN-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (753)
Q Consensus 92 ~~~~eG~L~K~~n-----~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~ 166 (753)
..+++|||.|++. ..++||+|||||+++.|+|||++.+.
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~------------------------------------ 45 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFER------------------------------------ 45 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTT------------------------------------
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCcc------------------------------------
Confidence 3578999999963 24789999999999999999985320
Q ss_pred ccCCCcccEEEcCceEEEecC---CCC--------------------------CcEEEEeCCeEEEEEcCCHHHHHHHHH
Q 004443 167 LLNRKPFGEVHLKVSSIRDSK---SDD--------------------------KRFSIFTGTKRLHLRAETREDRFAWME 217 (753)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~---~d~--------------------------~rF~I~t~tkt~~LrAeS~edr~~WI~ 217 (753)
....+|+|.|+|..+.+.+.. +++ ..|.|+++.|+|+|+|+|++||++||+
T Consensus 46 ~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~ 125 (169)
T 1btk_A 46 GRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIH 125 (169)
T ss_dssp TEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHH
T ss_pred CCCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHH
Confidence 011248899999877643211 111 468899999999999999999999999
Q ss_pred HHHHHHHhcc
Q 004443 218 ALQAVKDMFP 227 (753)
Q Consensus 218 AL~~a~~~~~ 227 (753)
||+.++..-+
T Consensus 126 aI~~~i~~n~ 135 (169)
T 1btk_A 126 QLKNVIRYNS 135 (169)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHHHHCc
Confidence 9999988644
No 31
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=4.7e-18 Score=152.97 Aligned_cols=92 Identities=20% Similarity=0.313 Sum_probs=76.4
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.+.++|||+|+ ..++||+|||||+++.|+||+++.+. .+
T Consensus 7 ~~~~~G~L~K~--~~k~Wk~RwfvL~~~~L~yyk~~~~~---------------------------------------~~ 45 (107)
T 2cof_A 7 GLETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRNRS---------------------------------------KV 45 (107)
T ss_dssp CCTTCCEEEEE--ETTEEEEEEEEECSSCEEEECSSTTC---------------------------------------SE
T ss_pred CCcEeEEEEEe--cCCCcceEEEEEECCEEEEEeCCccc---------------------------------------CC
Confidence 45689999999 77899999999999999999985431 12
Q ss_pred cccEEEcCceEEEecCCC--CCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 172 PFGEVHLKVSSIRDSKSD--DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d--~~rF~I~t~-tkt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
+.+.|.|..|.|...... ...|.|.++ .|+|+|+|+|++|+++||+||+.|..
T Consensus 46 ~~~~i~l~~~~v~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 46 AQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp EEEEECTTTCEEECCCBTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred CeeEEeccceEEEECCCCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 567888888877654432 467999998 89999999999999999999998855
No 32
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.73 E-value=5.7e-18 Score=157.40 Aligned_cols=98 Identities=26% Similarity=0.474 Sum_probs=79.3
Q ss_pred CccEEEEEEee--cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 92 GNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 92 ~~~~eG~L~K~--~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
.+.++|||+|+ ++..++||+|||||+++.|+||+.+.+. ..
T Consensus 4 ~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d~-------------------------------------~~ 46 (134)
T 2y7b_A 4 SVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDE-------------------------------------KR 46 (134)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHHH-------------------------------------TT
T ss_pred CceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCcc-------------------------------------cc
Confidence 46789999999 8888999999999999999999964321 12
Q ss_pred CCcccEEEcCceE---EEecC----CCCCcEEEEe--CC------------------eEEEEEcCCHHHHHHHHHHHHHH
Q 004443 170 RKPFGEVHLKVSS---IRDSK----SDDKRFSIFT--GT------------------KRLHLRAETREDRFAWMEALQAV 222 (753)
Q Consensus 170 ~kp~G~I~L~~ss---i~~~~----~d~~rF~I~t--~t------------------kt~~LrAeS~edr~~WI~AL~~a 222 (753)
.+|.|.|+|..++ |.... .....|.|.+ +. |+|+|+|+|++|+.+||.||+.|
T Consensus 47 ~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~ 126 (134)
T 2y7b_A 47 KNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQV 126 (134)
T ss_dssp SCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred cCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHH
Confidence 3589999999887 44432 2356798887 32 58999999999999999999999
Q ss_pred HHhc
Q 004443 223 KDMF 226 (753)
Q Consensus 223 ~~~~ 226 (753)
+..+
T Consensus 127 i~~~ 130 (134)
T 2y7b_A 127 LVDI 130 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 33
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.73 E-value=2.7e-18 Score=158.18 Aligned_cols=98 Identities=32% Similarity=0.421 Sum_probs=76.2
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~-~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
..+.++|||+|++...++||+|||||+ ++.|+||+.+.+.
T Consensus 6 ~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~~--------------------------------------- 46 (125)
T 1unq_A 6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQD--------------------------------------- 46 (125)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCS---------------------------------------
T ss_pred CCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCCC---------------------------------------
Confidence 346789999999999999999999999 5799999986541
Q ss_pred CCcccEEEcCceE-----EE-ecCCCCCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 170 RKPFGEVHLKVSS-----IR-DSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 170 ~kp~G~I~L~~ss-----i~-~~~~d~~rF~I~t----~tkt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
+++|.|+|..++ +. ........|.|.+ +.|+|+|+|+|++|+.+||.||+.++...+.
T Consensus 47 -~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 47 -VDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKK 114 (125)
T ss_dssp -HHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCceeEccceeEEeeeecccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 134555554433 22 2234467899985 5789999999999999999999999887553
No 34
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=8.5e-18 Score=155.24 Aligned_cols=96 Identities=24% Similarity=0.421 Sum_probs=79.5
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccc
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~--~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~ 167 (753)
.....++|||+|++...++||+|||||. ++.|+||+.+..
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~-------------------------------------- 56 (129)
T 1x1g_A 15 SGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKE-------------------------------------- 56 (129)
T ss_dssp CSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSC--------------------------------------
T ss_pred CCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCc--------------------------------------
Confidence 3457899999999999999999999998 479999997521
Q ss_pred cCCCcccEEEcCceEEEecCC-----------CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 168 LNRKPFGEVHLKVSSIRDSKS-----------DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~~~-----------d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
..+|+|.|+|..|.|..... ....|.|.++. |+|+|+|+|++|+++||.||+.|+.
T Consensus 57 -~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 57 -ENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp -CSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred -CCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 12489999999887654322 35789999986 7899999999999999999999965
No 35
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=162.23 Aligned_cols=98 Identities=17% Similarity=0.252 Sum_probs=78.0
Q ss_pred CccEEEEEEeecCC-----CCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccc
Q 004443 92 GNGISGVLYKWVNY-----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (753)
Q Consensus 92 ~~~~eG~L~K~~n~-----~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~ 166 (753)
..++||||.|++.. .|.||+|||||+++.|+||+++.+.
T Consensus 14 ~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~------------------------------------ 57 (164)
T 2lul_A 14 NTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEK------------------------------------ 57 (164)
T ss_dssp SEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSS------------------------------------
T ss_pred CeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcc------------------------------------
Confidence 35789999999753 2469999999999999999975431
Q ss_pred ccCCCcccEEEcCceEEE-ecCC--------CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 167 LLNRKPFGEVHLKVSSIR-DSKS--------DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~-~~~~--------d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
.+++|.|.|..+... .... ....|.|+++.|+|+|+|+|++||++||+||+.++..-+.
T Consensus 58 ---~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~ 125 (164)
T 2lul_A 58 ---KYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNNN 125 (164)
T ss_dssp ---CCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTTCSC
T ss_pred ---cccccEEEEeeeEEEEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHHChh
Confidence 237899999876532 2111 1346889999999999999999999999999999986554
No 36
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.73 E-value=7.1e-18 Score=158.00 Aligned_cols=99 Identities=23% Similarity=0.291 Sum_probs=77.3
Q ss_pred ccEEEEEEeec-CCCCCceeeEEEEe---CCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 93 NGISGVLYKWV-NYGKGWRPRWFVLQ---DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 93 ~~~eG~L~K~~-n~~kgWk~RWFVL~---~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
..++|||.|++ ...|+||+|||||+ +..|+|||++.+. ..
T Consensus 15 ~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~------------------------------------~~ 58 (126)
T 1v5p_A 15 NRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNL------------------------------------AV 58 (126)
T ss_dssp CCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTS------------------------------------CT
T ss_pred CceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCC------------------------------------CC
Confidence 35799999998 67899999999998 5577888874320 01
Q ss_pred CCCcccEEEcCc-eEEEecC---CC--CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 169 NRKPFGEVHLKV-SSIRDSK---SD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 169 ~~kp~G~I~L~~-ssi~~~~---~d--~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
..+|.|.|.|.. +.|.... .. ...|.|.++.|+|+|+|+|++|+++||+||+.|....+
T Consensus 59 ~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~~~~ 123 (126)
T 1v5p_A 59 GAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKSGP 123 (126)
T ss_dssp TCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTTTSS
T ss_pred CceeeEEEECCCccEEecCCcccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 245899999987 4565433 11 34688999999999999999999999999999977543
No 37
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=1.1e-17 Score=159.13 Aligned_cols=97 Identities=20% Similarity=0.259 Sum_probs=81.0
Q ss_pred CCCccEEEEEEeec------CCCCCceeeEEEEeCC-----eEEEEeecCCCccccchhccccceeeccchhhhhhhccc
Q 004443 90 IVGNGISGVLYKWV------NYGKGWRPRWFVLQDG-----VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKH 158 (753)
Q Consensus 90 ~~~~~~eG~L~K~~------n~~kgWk~RWFVL~~g-----~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~ 158 (753)
...+.++|||+|++ ...++||+|||||+++ .|+||+.+..
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~----------------------------- 65 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKI----------------------------- 65 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCC-----------------------------
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCC-----------------------------
Confidence 45678899999998 4568999999999887 9999997542
Q ss_pred ccccccccccCCCcccEEEcCceEEEecCC--CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 159 KKETTSQRLLNRKPFGEVHLKVSSIRDSKS--DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 159 ~~~~~~~~~~~~kp~G~I~L~~ssi~~~~~--d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
..+|+|.|+|..|++..... ....|.|.++. |+|+|+|+|++|+.+||.||+.|+..
T Consensus 66 ----------~~~~~g~I~L~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~ 125 (150)
T 1wg7_A 66 ----------SKEPKGSIFLDSCMGVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQL 125 (150)
T ss_dssp ----------SSCCSEEECTTTCCEECCCCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ----------CCCcCcEEecccCEEEecCCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 12489999999998765443 35679999985 99999999999999999999999764
No 38
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=1.5e-17 Score=153.00 Aligned_cols=94 Identities=16% Similarity=0.223 Sum_probs=78.1
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEeCC---eEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccc
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDG---VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~~g---~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~ 167 (753)
.+..+.|||+|.++ ++.||+|||||.++ +|+||+.+.+
T Consensus 6 ~~~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~d-------------------------------------- 46 (112)
T 2coc_A 6 SGSLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQD-------------------------------------- 46 (112)
T ss_dssp SSSSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTTC--------------------------------------
T ss_pred CCceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCCc--------------------------------------
Confidence 34567899999876 89999999999874 8999998654
Q ss_pred cCCCcccEEEcCceEEEec--CCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 168 LNRKPFGEVHLKVSSIRDS--KSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~--~~d---~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|.|.|.|..++|... .++ +..|.|..+.++|+|+|+|++++++||++|+.|...
T Consensus 47 --~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~~~ 107 (112)
T 2coc_A 47 --GRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTAAHS 107 (112)
T ss_dssp --SSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHSC
T ss_pred --cCcceEEEcCCCEEEecCcccccCCCCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHhcC
Confidence 24889999999998841 111 346889999999999999999999999999998654
No 39
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.72 E-value=1.8e-17 Score=157.51 Aligned_cols=97 Identities=23% Similarity=0.352 Sum_probs=79.8
Q ss_pred CCccEEEEEEeecCC----CCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccc
Q 004443 91 VGNGISGVLYKWVNY----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~----~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~ 166 (753)
....++|||+|++.. .++||+|||||+++.|+||+++.+
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~------------------------------------- 57 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD------------------------------------- 57 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTC-------------------------------------
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCC-------------------------------------
Confidence 567899999999853 479999999999999999997543
Q ss_pred ccCCCcccEEEcCceEEEecCC---C---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 167 LLNRKPFGEVHLKVSSIRDSKS---D---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~~---d---~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
.+|+|.|+|..+++..... + ...|.|.++. |+|+|+|+|++|+++||.||+.|+....
T Consensus 58 ---~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 122 (148)
T 1u5f_A 58 ---KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLG 122 (148)
T ss_dssp ---SSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC---
T ss_pred ---cccceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhc
Confidence 2489999999999875431 2 3579999986 9999999999999999999999987543
No 40
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.72 E-value=2.1e-17 Score=147.07 Aligned_cols=94 Identities=15% Similarity=0.272 Sum_probs=74.2
Q ss_pred EEEEEEeec--------CCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccc
Q 004443 95 ISGVLYKWV--------NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (753)
Q Consensus 95 ~eG~L~K~~--------n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~ 166 (753)
++|||+|++ ...++|++|||||+++.|+||+++.+.+ .
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~----------------------------------~ 46 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAA----------------------------------S 46 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHH----------------------------------H
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccc----------------------------------c
Confidence 589999998 7889999999999999999999754200 0
Q ss_pred ccCCCcccEEEcCceEEEecCC---CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 004443 167 LLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (753)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~~---d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a 222 (753)
.....+.+.|+|..+.+..... .+..|.|.++. ++|+|+|+|++|+++||.||+.|
T Consensus 47 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 47 GIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp TCCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred CCCCCCcceEECCCCEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 0112357789998887654332 25679999765 99999999999999999999975
No 41
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.72 E-value=1.7e-17 Score=154.28 Aligned_cols=104 Identities=16% Similarity=0.295 Sum_probs=79.6
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
....++|||+|++...+.||+|||||.++.|+||+.+.... .+. ...+.
T Consensus 10 ~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~----~e~---------------------------~plg~ 58 (124)
T 2w2x_D 10 DEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTM----EED---------------------------NPLGS 58 (124)
T ss_dssp ---CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHH----HCS---------------------------SCCCC
T ss_pred hhcceeEEEEEECCCCCCceEeEEEEECCEEEEEccccccc----ccc---------------------------cccCC
Confidence 35678999999999999999999999999999999853200 000 01224
Q ss_pred CcccEEEcCceEEEecCCC----CCcEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 171 KPFGEVHLKVSSIRDSKSD----DKRFSIFTG---TKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d----~~rF~I~t~---tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.++|.|+|..|.|....++ ...|.|.++ .++|+|.|+|.+|+++||.||+.|+..
T Consensus 59 ~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 59 LCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp SCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred ccccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 5799999999998776542 245788775 478999999999999999999999754
No 42
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.71 E-value=5.3e-17 Score=152.10 Aligned_cols=109 Identities=22% Similarity=0.320 Sum_probs=80.4
Q ss_pred CCccEEEEEEee-----cC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccc
Q 004443 91 VGNGISGVLYKW-----VN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (753)
Q Consensus 91 ~~~~~eG~L~K~-----~n-~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~ 164 (753)
....++|||.|+ |. ..|+|++|||||+++.|+|||++....... ..
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~------------------------~~---- 61 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSS------------------------GW---- 61 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC-------------------------------------
T ss_pred cceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccc------------------------cc----
Confidence 356789999995 32 348999999999999999999864311000 00
Q ss_pred ccccCCCcccEEEcCceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 165 QRLLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~~~d---~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
.....+|.|.|+|..|++....+. .+.|.|.++. ++|+|+|+|++|+++||+||+.|+...+|
T Consensus 62 -~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~~~ 128 (129)
T 2p0d_A 62 -GPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVR 128 (129)
T ss_dssp ------CCSEEEECTTCEEEECTTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred -cccCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhccC
Confidence 012345899999999998754332 3579999874 78999999999999999999999987664
No 43
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.71 E-value=4e-17 Score=149.17 Aligned_cols=93 Identities=19% Similarity=0.282 Sum_probs=74.4
Q ss_pred cEEEEEEeecC----CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 94 GISGVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 94 ~~eG~L~K~~n----~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
+++|||.|+++ ..+.||+|||||+++.|+|||++.+
T Consensus 1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~---------------------------------------- 40 (112)
T 3cxb_B 1 TKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTD---------------------------------------- 40 (112)
T ss_dssp CEEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSC----------------------------------------
T ss_pred CceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCC----------------------------------------
Confidence 47999997743 6789999999999999999997543
Q ss_pred CCcccEEEcCceEEE-----ecCCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 170 RKPFGEVHLKVSSIR-----DSKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~-----~~~~d~~rF~I~t-~tkt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
..|.|.|+|..+++. ........|.|.+ +.++|+|+|+|++|+++||+||+.|+...
T Consensus 41 ~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~~ 103 (112)
T 3cxb_B 41 VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSKG 103 (112)
T ss_dssp CSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred CCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhcc
Confidence 237899999865433 2223367899985 57899999999999999999999998753
No 44
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.70 E-value=5.1e-17 Score=149.57 Aligned_cols=104 Identities=17% Similarity=0.252 Sum_probs=80.1
Q ss_pred CCCccEEEEEEeecCC--------CCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccc
Q 004443 90 IVGNGISGVLYKWVNY--------GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKE 161 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~--------~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~ 161 (753)
.....++|||.|++.. .++||+|||||+++.|+|||++.+.+.
T Consensus 5 ~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~----------------------------- 55 (123)
T 1wjm_A 5 SSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASA----------------------------- 55 (123)
T ss_dssp CCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTT-----------------------------
T ss_pred CCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEccccccc-----------------------------
Confidence 3456789999999865 789999999999999999997543100
Q ss_pred cccccccCCCcccEEEcCceEEEecCC---CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 162 TTSQRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 162 ~~~~~~~~~kp~G~I~L~~ssi~~~~~---d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
....++.+.|+|..|.+....+ .+..|.|.++. ++|+|+|+|++|+++||.||+.++...+
T Consensus 56 -----~~~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~~ 120 (123)
T 1wjm_A 56 -----GVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASGP 120 (123)
T ss_dssp -----TCBSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHCC
T ss_pred -----CcccCCCceEEccCcEEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhccC
Confidence 0011234568888777665433 35679998875 9999999999999999999999998654
No 45
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.70 E-value=5.7e-17 Score=164.56 Aligned_cols=101 Identities=22% Similarity=0.361 Sum_probs=84.0
Q ss_pred ccccCCCCccEEEEEEeecC----CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccc
Q 004443 85 VKINDIVGNGISGVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKK 160 (753)
Q Consensus 85 ~~~~~~~~~~~eG~L~K~~n----~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~ 160 (753)
+.......+.++|||+|++. ..++||+|||||+++.|+||+++.+
T Consensus 98 ~~~~~l~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~------------------------------- 146 (211)
T 1u5e_A 98 IAAQDLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD------------------------------- 146 (211)
T ss_dssp CCGGGCSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTC-------------------------------
T ss_pred cChhhcCCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCC-------------------------------
Confidence 44444556889999999986 5789999999999999999998543
Q ss_pred ccccccccCCCcccEEEcCceEEEecC----CC--CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 161 ETTSQRLLNRKPFGEVHLKVSSIRDSK----SD--DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 161 ~~~~~~~~~~kp~G~I~L~~ssi~~~~----~d--~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|+|.|+|..+++.... .. ...|.|.++. |+|+|+|+|++|+++||.||+.|+..
T Consensus 147 ---------~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 147 ---------KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp ---------SSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ---------ccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 248999999999877632 11 4579999985 99999999999999999999999864
No 46
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.67 E-value=1.5e-16 Score=154.25 Aligned_cols=95 Identities=22% Similarity=0.310 Sum_probs=66.3
Q ss_pred ccEEEEEE----------eecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccc
Q 004443 93 NGISGVLY----------KWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKET 162 (753)
Q Consensus 93 ~~~eG~L~----------K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~ 162 (753)
+.++|||+ |+++..++||+|||||+++.|+||+++.+.
T Consensus 3 v~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~-------------------------------- 50 (168)
T 2j59_M 3 AAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQ-------------------------------- 50 (168)
T ss_dssp CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC--------------------------------
T ss_pred CcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCccc--------------------------------
Confidence 57899999 777888999999999999999999986431
Q ss_pred ccccccCCCcccEEEcCc--eEEEecC---CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 163 TSQRLLNRKPFGEVHLKV--SSIRDSK---SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 163 ~~~~~~~~kp~G~I~L~~--ssi~~~~---~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
..++.|.|.|.. |.+.... .....|.|.++.|+|+|+|+|++|+++||.||+.++..
T Consensus 51 ------~~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~~ 112 (168)
T 2j59_M 51 ------TTPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSNL 112 (168)
T ss_dssp --------------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred ------ccccCCceEecccceEEEeccccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 012567766654 5543332 23568999999999999999999999999999999653
No 47
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.66 E-value=2e-16 Score=147.21 Aligned_cols=91 Identities=24% Similarity=0.340 Sum_probs=76.3
Q ss_pred CccEEEEEEe-ecCCCCC-ceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 92 GNGISGVLYK-WVNYGKG-WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 92 ~~~~eG~L~K-~~n~~kg-Wk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
+++++|||+| .++.+|+ ||+|||||.+..|+|||...+
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~e---------------------------------------- 50 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEE---------------------------------------- 50 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTC----------------------------------------
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCcc----------------------------------------
Confidence 3789999999 4778885 999999999999999998553
Q ss_pred CCcccEEEcCceEEEecCC----CCCcEEEEeCC--------eEEEEEcCCHHHHHHHHHHHHHH
Q 004443 170 RKPFGEVHLKVSSIRDSKS----DDKRFSIFTGT--------KRLHLRAETREDRFAWMEALQAV 222 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~----d~~rF~I~t~t--------kt~~LrAeS~edr~~WI~AL~~a 222 (753)
..|+|.|.|....|++..+ ...+|.|+++. ++|.|.|+|.+|+++||.||..|
T Consensus 51 ke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 51 KEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp SCEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred cccceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 2489999999999887543 23568888754 49999999999999999999666
No 48
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.66 E-value=2.1e-16 Score=161.90 Aligned_cols=97 Identities=24% Similarity=0.398 Sum_probs=83.0
Q ss_pred CCCCccEEEEEEeecCCC-----CCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccc
Q 004443 89 DIVGNGISGVLYKWVNYG-----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (753)
Q Consensus 89 ~~~~~~~eG~L~K~~n~~-----kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~ 163 (753)
....+.++|||.|++... ++||+|||||+++.|+||+++.+
T Consensus 54 ~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~---------------------------------- 99 (228)
T 3tfm_A 54 SKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE---------------------------------- 99 (228)
T ss_dssp SCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC----------------------------------
T ss_pred cCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC----------------------------------
Confidence 445688999999999765 89999999999999999997543
Q ss_pred cccccCCCcccEEEcCceEEEec-CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 164 SQRLLNRKPFGEVHLKVSSIRDS-KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 164 ~~~~~~~kp~G~I~L~~ssi~~~-~~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|+|.|+|..+++... ...+..|.|.++.|+|+|+|+|++|+++||.||+.++..
T Consensus 100 ------~~~~g~I~L~~~~~v~~~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 100 ------EKLKGTVEVRSAKEIIDNTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp ------CSEEEEEEGGGCSEEEEETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ------cceeEEEEcCCCEEeccCCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 24789999998885443 334678999999999999999999999999999999863
No 49
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.62 E-value=1.1e-15 Score=165.86 Aligned_cols=96 Identities=26% Similarity=0.502 Sum_probs=82.0
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.+.++|||+|+++..++||+|||||+++.|+||+++.+ .+
T Consensus 212 ~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~----------------------------------------~~ 251 (347)
T 2r09_A 212 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------------KE 251 (347)
T ss_dssp CCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------SS
T ss_pred ccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCCc----------------------------------------cC
Confidence 46899999999998999999999999999999997543 24
Q ss_pred cccEEEcCceEEEecCC--CCCcEEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 172 PFGEVHLKVSSIRDSKS--DDKRFSIFTG----------------------TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~--d~~rF~I~t~----------------------tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
|+|.|.|..++|..... ....|.|.++ .|+|+|+|+|++|+++||.||+.++...+
T Consensus 252 p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~~ 331 (347)
T 2r09_A 252 PRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDP 331 (347)
T ss_dssp CSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCCH
T ss_pred CcEEEEcCCeEEEEccCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 89999999998776543 3567888875 48999999999999999999999987543
No 50
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.62 E-value=4.1e-16 Score=172.15 Aligned_cols=96 Identities=21% Similarity=0.208 Sum_probs=79.7
Q ss_pred CCCccEEEEEEee---cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccc
Q 004443 90 IVGNGISGVLYKW---VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (753)
Q Consensus 90 ~~~~~~eG~L~K~---~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~ 166 (753)
..++.++|||+|+ |..+++|++|||||++|.|+||+....
T Consensus 298 ~~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~~------------------------------------- 340 (407)
T 4h8s_A 298 RNLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAV------------------------------------- 340 (407)
T ss_dssp CSCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTCS-------------------------------------
T ss_pred CCcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCCC-------------------------------------
Confidence 3456789999998 455688999999999999999985221
Q ss_pred ccCCCcccEEEcCceEEEecCCCCCc--EEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 167 LLNRKPFGEVHLKVSSIRDSKSDDKR--FSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~~d~~r--F~I~t~t--kt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
++.+.|+|..|+|+.....+++ |.|++++ |+|+|+|+|++||.+||.||+.|+...
T Consensus 341 ----~~~~~~~l~~~~v~~~~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 341 ----AGGLIQDLDNCSVMAVDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp ----SCCCCBCSSCCEEEEECCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred ----CCCeEEECCceEEEECCCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 2567889999999987766665 6688875 689999999999999999999998754
No 51
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.61 E-value=1.7e-15 Score=158.66 Aligned_cols=103 Identities=17% Similarity=0.278 Sum_probs=82.6
Q ss_pred CCccEEEEEE--------eecCC----CCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccc
Q 004443 91 VGNGISGVLY--------KWVNY----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKH 158 (753)
Q Consensus 91 ~~~~~eG~L~--------K~~n~----~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~ 158 (753)
....++|||+ |++.. .|+||+|||||+++.|+|||++.....
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~-------------------------- 62 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNST-------------------------- 62 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC-----------------------------
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCccccc--------------------------
Confidence 3567999999 77777 899999999999999999998543100
Q ss_pred ccccccccccCCCcccEEEcCceEEEecCC---CCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 159 KKETTSQRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 159 ~~~~~~~~~~~~kp~G~I~L~~ssi~~~~~---d~~rF~I~t-~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
....+|.|.|.|..|.|....+ ....|.|.+ +.++|+|+|+|++|+++||.||+.|+...+
T Consensus 63 --------~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~ 127 (263)
T 3a8p_A 63 --------EQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLF 127 (263)
T ss_dssp -----------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred --------ccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 1123589999999998775433 256799999 689999999999999999999999998765
No 52
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.61 E-value=1.2e-15 Score=167.97 Aligned_cols=95 Identities=24% Similarity=0.346 Sum_probs=78.4
Q ss_pred CCccEEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 91 VGNGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~-kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
....++|||.|++... ++||+|||||+++.|+||+++.+
T Consensus 267 ~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d---------------------------------------- 306 (386)
T 3lju_X 267 RNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLD---------------------------------------- 306 (386)
T ss_dssp CCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTC----------------------------------------
T ss_pred cccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCC----------------------------------------
Confidence 4567899999999887 99999999999999999998554
Q ss_pred CCcccEEEcCceE----EEecCC--C-----CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 170 RKPFGEVHLKVSS----IRDSKS--D-----DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 170 ~kp~G~I~L~~ss----i~~~~~--d-----~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|+|.|+|..+. |..... . ...|.|.++.|+|+|+|+|++|+++||.||+.+++.
T Consensus 307 ~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 307 AFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp SBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred cccceEEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 2378999996543 332111 1 245899999999999999999999999999999875
No 53
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.60 E-value=1.6e-15 Score=166.35 Aligned_cols=94 Identities=19% Similarity=0.260 Sum_probs=76.1
Q ss_pred CccEEEEEEeecCCC---CCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 92 GNGISGVLYKWVNYG---KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~---kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
++.++|||+|++..+ +.|++|||||++|.|+||+. ++
T Consensus 277 ~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~~--------------------------------------- 316 (385)
T 2q13_A 277 LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-GD--------------------------------------- 316 (385)
T ss_dssp CSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-SC---------------------------------------
T ss_pred CccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-CC---------------------------------------
Confidence 567899999998652 36999999999999999997 22
Q ss_pred CCCcccEEEcCceEEEecCCCC--CcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 169 NRKPFGEVHLKVSSIRDSKSDD--KRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~d~--~rF~I~t~t--kt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
..+.|.|+|..|+|+.....+ ..|.|+|++ |+|+|+|+|++||++||.||+.++...
T Consensus 317 -~~~~~~i~l~~~~v~~~~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~ 377 (385)
T 2q13_A 317 -VAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQI 377 (385)
T ss_dssp -SSCEEEEECTTCEEEEECCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHTTC
T ss_pred -cCCCceEEccceEEEeccccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 125689999999987765444 467899998 999999999999999999999998753
No 54
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.59 E-value=2e-15 Score=158.38 Aligned_cols=97 Identities=20% Similarity=0.317 Sum_probs=75.9
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEeCC-------eEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccc
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDG-------VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~~g-------~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~ 163 (753)
..+.++|||+|+ |+||+|||||+++ .|+|||++.+..
T Consensus 8 ~~v~k~G~L~K~----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~-------------------------------- 51 (264)
T 1qqg_A 8 SDVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKWR-------------------------------- 51 (264)
T ss_dssp -CEEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHH--------------------------------
T ss_pred CCccEEEEEEEC----CCCEeEEEEEECCCCCCCCCEEEEECCCcccc--------------------------------
Confidence 356789999998 8999999999887 999999754200
Q ss_pred cccccCCCcccEEEcCceE-EEec--CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 164 SQRLLNRKPFGEVHLKVSS-IRDS--KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 164 ~~~~~~~kp~G~I~L~~ss-i~~~--~~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
....+|+|.|+|..+. |... ......|.|.|+.|+|+|+|+|++|+++||.||+.++...
T Consensus 52 ---~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 52 ---HKSSAPKRSIPLESCFNINKRADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp ---TTCSCCSEEEEGGGEEEEEEECCSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred ---ccccCcceEEEeeceEEEEeccCCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 0113589999999886 4332 2335689999999999999999999999999999997654
No 55
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.57 E-value=3.2e-15 Score=137.84 Aligned_cols=103 Identities=17% Similarity=0.263 Sum_probs=77.1
Q ss_pred CCccEEEEEEeecC--------CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccc
Q 004443 91 VGNGISGVLYKWVN--------YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKET 162 (753)
Q Consensus 91 ~~~~~eG~L~K~~n--------~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~ 162 (753)
.+..++|||+|+.. ..+.|++|||||+++.|+|||++.+.+.. +
T Consensus 6 ~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~---------------------------~- 57 (122)
T 1dro_A 6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSN---------------------------P- 57 (122)
T ss_dssp SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHC---------------------------T-
T ss_pred CceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccC---------------------------C-
Confidence 45678999998743 46789999999999999999986541100 0
Q ss_pred ccccccCCCcccEEEcCceEEEecCC---CCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 163 TSQRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 163 ~~~~~~~~kp~G~I~L~~ssi~~~~~---d~~rF~I~t-~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
...-.+.+.|+|..|.+....+ ....|.|.+ +.++|.|+|+|++|+++||.||+.|+..
T Consensus 58 ----~~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 58 ----ELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp ----TCCSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred ----CcccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 0011234788898877654332 246799986 6799999999999999999999999864
No 56
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.55 E-value=8.9e-15 Score=161.06 Aligned_cols=94 Identities=18% Similarity=0.331 Sum_probs=77.4
Q ss_pred CccEEEEEEeecCCCCCceeeEEEE--eCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL--~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
...++|||+|+|...|+||+||||| +++.|+||+++.+
T Consensus 145 ~~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~~---------------------------------------- 184 (386)
T 3lju_X 145 AGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDA---------------------------------------- 184 (386)
T ss_dssp SSEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC--------------------------------------------
T ss_pred ccccccceeeeccccCCceEEEEEEEcCCCEEEEECCCCc----------------------------------------
Confidence 4578999999999999999999999 8999999998543
Q ss_pred CCcccEEEcCceEEEecC---CCCCcEEEE----eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 170 RKPFGEVHLKVSSIRDSK---SDDKRFSIF----TGTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~---~d~~rF~I~----t~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+|+|.|.|....+.... ..+..|.|. +++|+|+|+|+|.+|+.+||+||+.|+..
T Consensus 185 ~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~~ 247 (386)
T 3lju_X 185 KEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFH 247 (386)
T ss_dssp -CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCcccEEEeeccEEEEcccccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhcccc
Confidence 348999999987655432 346788887 67899999999999999999999988543
No 57
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.53 E-value=1.9e-14 Score=150.48 Aligned_cols=94 Identities=17% Similarity=0.257 Sum_probs=73.2
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
...|.++|||+|++...|+||+|||||+++.|+||++..+.
T Consensus 165 ~~~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~--------------------------------------- 205 (291)
T 3tca_A 165 IIVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTK--------------------------------------- 205 (291)
T ss_dssp CCCCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCCS---------------------------------------
T ss_pred CCCCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCccc---------------------------------------
Confidence 34678999999999999999999999999999999975542
Q ss_pred CCcccE---EEcCceEEEecCC--------CCCcEEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHH
Q 004443 170 RKPFGE---VHLKVSSIRDSKS--------DDKRFSIFTGT------KRLHLRAETREDRFAWMEALQAVK 223 (753)
Q Consensus 170 ~kp~G~---I~L~~ssi~~~~~--------d~~rF~I~t~t------kt~~LrAeS~edr~~WI~AL~~a~ 223 (753)
+|+|. ++|.++.|..... ....|.|.++. ++|+|+|+|++|+..||.||+.|+
T Consensus 206 -~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 206 -TSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp -STTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred -cccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 23444 4455555543221 24568888753 579999999999999999999886
No 58
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.49 E-value=2.9e-13 Score=127.04 Aligned_cols=103 Identities=15% Similarity=0.227 Sum_probs=78.9
Q ss_pred cEEEEEEee-----cCC--CCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccc
Q 004443 94 GISGVLYKW-----VNY--GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (753)
Q Consensus 94 ~~eG~L~K~-----~n~--~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~ 166 (753)
.++|+|.+. |.. .+.|++|||||.+..|+||+.+.-.. .+ ..
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~---------------~~----------------~~ 50 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRG---------------TD----------------RK 50 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCC---------------SS----------------GG
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEccccccc---------------cc----------------cc
Confidence 578999854 653 58899999999999999999653100 00 00
Q ss_pred ccCCCcccEEEcCceEEEecCC--CCCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 167 LLNRKPFGEVHLKVSSIRDSKS--DDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~~--d~~rF~I~t~--tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
+....|.|.|.|.++.|..... .+..|.|.++ +..|.|+|+|.+++++||.||..|+...+
T Consensus 51 ~~~~~P~~~i~L~g~~V~~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~ 115 (126)
T 2dtc_A 51 HYKSTPGKKVSIVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSR 115 (126)
T ss_dssp GBCSSCSEEEECTTCEEECCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCC
T ss_pred ccccCCCceEEeCCCEEEecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCC
Confidence 1234689999999999874322 2467999875 78999999999999999999999988643
No 59
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.48 E-value=4e-14 Score=131.08 Aligned_cols=93 Identities=19% Similarity=0.335 Sum_probs=71.3
Q ss_pred EEEEEEe--ecCCCC-CceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 95 ISGVLYK--WVNYGK-GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 95 ~eG~L~K--~~n~~k-gWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
++|||.+ .++..| +|++|||||.++.|+||+.+.+ ....+
T Consensus 3 ~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~-------------------------------------~~~~~ 45 (117)
T 2rov_A 3 LEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQD-------------------------------------KEQSN 45 (117)
T ss_dssp SEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHH-------------------------------------HHTTC
T ss_pred eEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCC-------------------------------------cccCC
Confidence 5999996 888888 9999999999999999997432 01234
Q ss_pred cccEEEcCceE-EEecC---------C-CCCcEEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 172 PFGEVHLKVSS-IRDSK---------S-DDKRFSIFTG------TKRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 172 p~G~I~L~~ss-i~~~~---------~-d~~rF~I~t~------tkt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
|.|.|+|.... |.... . .++.|.|.+. .++|+|.|+|.+|+++||.||+.++.
T Consensus 46 p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 46 PYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp CSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred ceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 78999985543 22111 1 1356999763 59999999999999999999998754
No 60
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.47 E-value=2.4e-13 Score=126.36 Aligned_cols=105 Identities=16% Similarity=0.216 Sum_probs=75.5
Q ss_pred CccEEEEEEee-----cC--CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccc
Q 004443 92 GNGISGVLYKW-----VN--YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (753)
Q Consensus 92 ~~~~eG~L~K~-----~n--~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~ 164 (753)
...++|||+|. +. ..++|++|||||+++.|+|||++...... +.+.
T Consensus 7 ~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~---------------------------~~~~ 59 (124)
T 3pp2_A 7 TLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAG---------------------------GLRQ 59 (124)
T ss_dssp --CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC------------------------------CBCC
T ss_pred cEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCcccccc---------------------------CccC
Confidence 35689999986 21 22589999999999999999975542100 0000
Q ss_pred ccccCCCcccEEEcCceEEEecC-C---CCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 165 QRLLNRKPFGEVHLKVSSIRDSK-S---DDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~~-~---d~~rF~I~t~-tkt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
+ .....|.+.|+|..|.+.... + ....|.|.++ +++|.|+|+|++|+++||.+|+.|++
T Consensus 60 ~-~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 60 P-SKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp G-GGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred c-ccccCCcceEEcCCCEEEecccccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 0 000247899999999876642 2 2567999885 68999999999999999999999975
No 61
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=7.5e-14 Score=131.93 Aligned_cols=94 Identities=20% Similarity=0.394 Sum_probs=75.5
Q ss_pred CccEEEEEEeec---CCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 92 GNGISGVLYKWV---NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 92 ~~~~eG~L~K~~---n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
.|.+++||...+ ...|+||+|||||+++.|+|||++.+.
T Consensus 8 ~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~-------------------------------------- 49 (137)
T 2ys3_A 8 IPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEA-------------------------------------- 49 (137)
T ss_dssp CCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTT--------------------------------------
T ss_pred CcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhc--------------------------------------
Confidence 467899999875 346899999999999999999987651
Q ss_pred CCCcccEEEcCceEEEecCC-CCCcEE--EEeC----CeEEEEEcCCHHHHHHHHHHHHHHH
Q 004443 169 NRKPFGEVHLKVSSIRDSKS-DDKRFS--IFTG----TKRLHLRAETREDRFAWMEALQAVK 223 (753)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~-d~~rF~--I~t~----tkt~~LrAeS~edr~~WI~AL~~a~ 223 (753)
...|.|.|+|..|+|..+.+ ....|. +..| .|+|+|+|+|+++++.||.|++.|.
T Consensus 50 ~~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAs 111 (137)
T 2ys3_A 50 PGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLAS 111 (137)
T ss_dssp TSCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cCCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHhc
Confidence 12489999999999877632 245555 3443 4999999999999999999999875
No 62
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.37 E-value=3e-12 Score=122.96 Aligned_cols=128 Identities=20% Similarity=0.234 Sum_probs=79.7
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccc---------
Q 004443 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS--------- 164 (753)
Q Consensus 94 ~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~--------- 164 (753)
.++|||+|+....+.|++|||||.++.|+|++......-....+..+ -......+ .+.-..+.++...
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~--~~~~~~~~-~~~~n~~fh~~~~~~~e~~~~~ 78 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPK--EASGSTEL-HSSLEVLFQGPNPAILEPEREH 78 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSC--CCCCSCCC-CCCSSSGGGSSCSTTSCTTCSS
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCccccc--ccCCchhh-cccchhccccCCccccchhHhc
Confidence 57999999999999999999999999999999433210000000000 00000000 0000000000000
Q ss_pred ---ccccCCCcccEEEcCceEEEecCCC----CCcEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 165 ---QRLLNRKPFGEVHLKVSSIRDSKSD----DKRFSIFTG---TKRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 165 ---~~~~~~kp~G~I~L~~ssi~~~~~d----~~rF~I~t~---tkt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
...++.-.+|.|+|..|.|...... ...|.|.++ .++|.|.|+|.+|+.+||+||+.|..
T Consensus 79 l~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 79 LDENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp SCTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 0012223589999999999766532 346778876 45999999999999999999999975
No 63
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.34 E-value=3.7e-12 Score=122.17 Aligned_cols=95 Identities=20% Similarity=0.378 Sum_probs=72.3
Q ss_pred CccEEEEEEeec---CCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccccc
Q 004443 92 GNGISGVLYKWV---NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (753)
Q Consensus 92 ~~~~eG~L~K~~---n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~ 168 (753)
-|..++||.... -..|+||+||||++|+.|+|||++.+.
T Consensus 25 iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~-------------------------------------- 66 (165)
T 4bbk_A 25 IPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELE-------------------------------------- 66 (165)
T ss_dssp -CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGT--------------------------------------
T ss_pred ChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHh--------------------------------------
Confidence 356799997753 357999999999999999999997641
Q ss_pred CCCcccEEEcCceEEEecCC-CCCcEEEE--e----CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 169 NRKPFGEVHLKVSSIRDSKS-DDKRFSIF--T----GTKRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~-d~~rF~I~--t----~tkt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
...|.+.|+|++|+|.++.. ...+|.|. . |...++|+|+|+.++..||.|++.|..
T Consensus 67 ~geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 67 QGEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp TSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cCCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhccc
Confidence 12389999999999987533 34455432 1 357899999999999999999999865
No 64
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=1.5e-11 Score=114.47 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=73.9
Q ss_pred CccEEEEEEeec--CCCCCceeeEEEEeC------CeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccc
Q 004443 92 GNGISGVLYKWV--NYGKGWRPRWFVLQD------GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (753)
Q Consensus 92 ~~~~eG~L~K~~--n~~kgWk~RWFVL~~------g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~ 163 (753)
.+.++|||+++. .++|.||+|||||.. .-|-||+.+...
T Consensus 11 ~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~--------------------------------- 57 (127)
T 2d9w_A 11 GAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKP--------------------------------- 57 (127)
T ss_dssp CSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCS---------------------------------
T ss_pred ccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCcc---------------------------------
Confidence 467899999997 688899999999953 368999985431
Q ss_pred cccccCCCcccEEEcCceE-EEecCCC------CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 004443 164 SQRLLNRKPFGEVHLKVSS-IRDSKSD------DKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (753)
Q Consensus 164 ~~~~~~~kp~G~I~L~~ss-i~~~~~d------~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a 222 (753)
..+..++..|.|+.|. |.+...+ ...|.|.|+.|+|.|.|++. ++.+||++|...
T Consensus 58 ---~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 58 ---RRCEAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLL 119 (127)
T ss_dssp ---SSCSCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHH
T ss_pred ---ccCCCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHH
Confidence 1223478999999985 5544332 25689999999999999965 899999999876
No 65
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.29 E-value=5.5e-12 Score=139.44 Aligned_cols=95 Identities=31% Similarity=0.426 Sum_probs=69.7
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~-~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
...++|||.|+|+..|.||+|||||+ +|.|.|||.+.+.
T Consensus 5 ~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~~~---------------------------------------- 44 (446)
T 4ejn_A 5 AIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQD---------------------------------------- 44 (446)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC------------------------------------------
T ss_pred eEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCCCC----------------------------------------
Confidence 46789999999999999999999997 8999999986542
Q ss_pred CcccEEEcCc-----eEEE-ecCCCCCcEEEEeCC-eEE---EEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 171 KPFGEVHLKV-----SSIR-DSKSDDKRFSIFTGT-KRL---HLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 171 kp~G~I~L~~-----ssi~-~~~~d~~rF~I~t~t-kt~---~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
.+.|.|.|.. |.+. .....+.+|.|.+.. +++ .+.|++.++++.|+.||+.++...
T Consensus 45 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 45 VDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp -----CCCGGGBCTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred CccCcccccCccccceeecCCCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 1345555554 3332 233336789998753 333 789999999999999999996543
No 66
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.28 E-value=1.4e-11 Score=119.40 Aligned_cols=95 Identities=18% Similarity=0.351 Sum_probs=75.8
Q ss_pred ccEEEEEEeec---CCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 93 NGISGVLYKWV---NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 93 ~~~eG~L~K~~---n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
|..++||.... --.||||+||||++|+.|+|||++.+. .
T Consensus 47 PeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~--------------------------------------~ 88 (173)
T 4f7h_A 47 PELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEES--------------------------------------S 88 (173)
T ss_dssp TCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGC--------------------------------------S
T ss_pred hhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHh--------------------------------------c
Confidence 66899997643 346999999999999999999997641 1
Q ss_pred CCcccEEEcCceEEEecCCC-CCcEEEE---e---CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 170 RKPFGEVHLKVSSIRDSKSD-DKRFSIF---T---GTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d-~~rF~I~---t---~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
..|.|.|+|++|+|..+..- ..+|.|. . |.+.++|+|+|++.+..||.|++.|..-
T Consensus 89 geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLAskG 151 (173)
T 4f7h_A 89 GTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKG 151 (173)
T ss_dssp SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred CCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhhccC
Confidence 23899999999999876433 4555532 2 5689999999999999999999998653
No 67
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.19 E-value=5.9e-11 Score=113.99 Aligned_cols=94 Identities=19% Similarity=0.092 Sum_probs=75.2
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
.....++|||.|+.++. ||+|||+|.++-+.||-+...
T Consensus 49 ge~Ilk~G~v~KrkGl~--~kkR~liLT~~PrL~Yvdp~~---------------------------------------- 86 (151)
T 1w1g_A 49 NNLILKMGPVDKRKGLF--ARRRQLLLTEGPHLYYVDPVN---------------------------------------- 86 (151)
T ss_dssp TCCEEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT----------------------------------------
T ss_pred CCcEEEEEEEEecccCc--ceeEEEEEcCCceEEEEcCcc----------------------------------------
Confidence 34567899999976555 999999999998888887443
Q ss_pred CCcccEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 170 RKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
...+|+|.|..+.-.+..+ ++.|.|.|++|+|+|.|. ..++++|++||+.++..+-
T Consensus 87 ~~~KGeIpls~~l~ve~k~-~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~~ 142 (151)
T 1w1g_A 87 KVLKGEIPWSQELRPEAKN-FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQRY 142 (151)
T ss_dssp TEEEEEECCCTTCEEEESS-SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHHH
T ss_pred ccccceEecCCCeeEEEcC-CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHHh
Confidence 1257999998654233333 779999999999999997 8899999999999988753
No 68
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.15 E-value=5.2e-11 Score=125.59 Aligned_cols=102 Identities=17% Similarity=0.251 Sum_probs=76.1
Q ss_pred CCccEEEEEEee-----cC-------CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccc
Q 004443 91 VGNGISGVLYKW-----VN-------YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKH 158 (753)
Q Consensus 91 ~~~~~eG~L~K~-----~n-------~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~ 158 (753)
..+.++|||.++ +. ..+.|++|||||+++.|+|||.+.....
T Consensus 9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~-------------------------- 62 (279)
T 3a8n_A 9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGI-------------------------- 62 (279)
T ss_dssp -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC-------------------------------
T ss_pred CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEeccccccc--------------------------
Confidence 346789999753 11 2478999999999999999998654210
Q ss_pred ccccccccccCCCcccEEEcCceEEEecCCC---CCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 159 KKETTSQRLLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 159 ~~~~~~~~~~~~kp~G~I~L~~ssi~~~~~d---~~rF~I~t-~tkt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
.....|.|.|.|..+.+....+. +..|.|.+ ..+.|.|+|+|.+|+++||.||+.|...+
T Consensus 63 --------~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 63 --------DHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp -----------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred --------ccccCCCceEeccCcEEEeccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 11234788999999998744332 45799986 57899999999999999999999998864
No 69
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.14 E-value=1.5e-10 Score=120.81 Aligned_cols=96 Identities=22% Similarity=0.182 Sum_probs=73.4
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
...+.++|||+++....|+||+|||+|+++.|+||+.....
T Consensus 129 s~~P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~sk--------------------------------------- 169 (256)
T 3hk0_A 129 SSSPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSA--------------------------------------- 169 (256)
T ss_dssp TSCEEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTTCC---------------------------------------
T ss_pred CCCCcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCCCC---------------------------------------
Confidence 45678999999998778999999999999999999863321
Q ss_pred CCcccE---EEcCceEEEecCC--------CCCcEEEEeCCe------EEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 170 RKPFGE---VHLKVSSIRDSKS--------DDKRFSIFTGTK------RLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 170 ~kp~G~---I~L~~ssi~~~~~--------d~~rF~I~t~tk------t~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+++. ++|....|..... .+..|+|..... .++|+|++++++..||.||+.|+--
T Consensus 170 -~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g 241 (256)
T 3hk0_A 170 -APRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYG 241 (256)
T ss_dssp -CGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred -ccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 13343 5777777654331 244677876543 5999999999999999999999753
No 70
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.13 E-value=1.4e-10 Score=122.37 Aligned_cols=98 Identities=16% Similarity=0.218 Sum_probs=71.9
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
..+.++|||++++...|+|++|||||+++.|+||++.... ...
T Consensus 156 ~~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~sk-------------------------------------~~r 198 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAK-------------------------------------VSR 198 (281)
T ss_dssp CCCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC----------------------------------------------
T ss_pred CCCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCCC-------------------------------------ccc
Confidence 4577999999998878999999999999999999864321 001
Q ss_pred CcccEEEcCceEEEecC--------CCCCcEEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 171 KPFGEVHLKVSSIRDSK--------SDDKRFSIFTGT------KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 171 kp~G~I~L~~ssi~~~~--------~d~~rF~I~t~t------kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
...+.++|..+.|.... ..+..|+|..+. .+++|+|++++++..||.||+.|+--
T Consensus 199 ~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~g 267 (281)
T 4gmv_A 199 DLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYG 267 (281)
T ss_dssp CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhhC
Confidence 13456688877765532 236678888643 47999999999999999999999753
No 71
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.48 E-value=5e-07 Score=84.02 Aligned_cols=94 Identities=14% Similarity=0.248 Sum_probs=73.2
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
.....++||+-+.++.-+.||||||+|+...++||++..+
T Consensus 5 ~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~~---------------------------------------- 44 (125)
T 2coa_A 5 SSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTT---------------------------------------- 44 (125)
T ss_dssp CCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSSC----------------------------------------
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecCCC----------------------------------------
Confidence 4467889999999999999999999999999999998543
Q ss_pred CCcccEEEcCc-eEEEecC--------CCCCcEEEEeCCeEEEEEcC---C--------HHHHHHHHHHHHHHH
Q 004443 170 RKPFGEVHLKV-SSIRDSK--------SDDKRFSIFTGTKRLHLRAE---T--------REDRFAWMEALQAVK 223 (753)
Q Consensus 170 ~kp~G~I~L~~-ssi~~~~--------~d~~rF~I~t~tkt~~LrAe---S--------~edr~~WI~AL~~a~ 223 (753)
.++.-+|.|+. -.|.+.. ..+..|.|.|...+|++.++ . .+.+..|..||+.|.
T Consensus 45 ~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 45 NRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp SSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred CceeeeeehhHeecccccccccccCCCCCCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 23556677753 2333321 23578999999999999884 1 356999999999985
No 72
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.42 E-value=1.6e-07 Score=95.93 Aligned_cols=43 Identities=19% Similarity=0.391 Sum_probs=34.9
Q ss_pred ccCCCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCC
Q 004443 87 INDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGP 129 (753)
Q Consensus 87 ~~~~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~ 129 (753)
..+...+..+|||+|+|..+|+||+|||||+++.|.||+..++
T Consensus 15 ~~~~~~~~~~g~l~~~~~~~~~w~~rw~vl~~~~~~~~~~~~~ 57 (228)
T 3tfm_A 15 FQGPGSPYFHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSKQE 57 (228)
T ss_dssp ------CCEEEEEEECCTTTCCCEEEEEEEETTEEEEESSCCC
T ss_pred ecCCCCCceEEEEeecCcccccceEEEEEEeCCEEEEeccCCC
Confidence 3455678899999999999999999999999999999998664
No 73
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=4.1e-06 Score=78.19 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=73.2
Q ss_pred CCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 90 ~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
.....++||+-+.++.-+.|||+|++|+...|.||++..+
T Consensus 5 ~s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~~---------------------------------------- 44 (129)
T 2d9z_A 5 SSGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESG---------------------------------------- 44 (129)
T ss_dssp CTTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSSC----------------------------------------
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecCCC----------------------------------------
Confidence 3456789999999999999999999999999999998443
Q ss_pred CCcccEEEcCce-EEEec--------CCCCCcEEEEeCCeEEEEEcCC---------------HHHHHHHHHHHHHHHH
Q 004443 170 RKPFGEVHLKVS-SIRDS--------KSDDKRFSIFTGTKRLHLRAET---------------REDRFAWMEALQAVKD 224 (753)
Q Consensus 170 ~kp~G~I~L~~s-si~~~--------~~d~~rF~I~t~tkt~~LrAeS---------------~edr~~WI~AL~~a~~ 224 (753)
.++.-+|.|+.- .|... ...+..|.|.|.+.+|++.++. .+.+..|..||+.|..
T Consensus 45 ~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 45 SKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp CSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred CceeceeeHHHhcccccccCccccCCCCCCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 224455666432 22221 1224789999999999998853 7999999999999864
No 74
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.96 E-value=4.2e-05 Score=75.92 Aligned_cols=103 Identities=17% Similarity=0.280 Sum_probs=78.9
Q ss_pred CCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 91 ~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
-....+|-|...+..+ .|+.||++|=+.+|-|-+.++. +..+.. ...
T Consensus 69 R~Ll~eG~L~~k~~~~-~~~d~~~fLf~D~Ll~~~~~~~-ky~~~~-------------------------------~~~ 115 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAAG-RLKEVQAVLLTDILVFLQEKDQ-KYIFAS-------------------------------LDQ 115 (185)
T ss_dssp SCEEEEEEEEEECTTC-CEEEEEEEEESSEEECCEEETT-EEECCC-------------------------------CSS
T ss_pred CceeeeceEEEeccCC-CeeeEEEEeecCEEEEEEecCC-EEEEEc-------------------------------ccC
Confidence 3567899998555444 6999999998889988876543 322210 001
Q ss_pred CcccEEEcCceEEEecCCCCCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 171 KPFGEVHLKVSSIRDSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d~~rF~I~t----~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
....|.|....|++...+++.|.+++ |.+.|.|.|.|++||..||++|+.|+..++
T Consensus 116 -~~pvi~L~~~~vre~a~d~~~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 116 -KSTVISLKKLIVREVAHEEKGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp -SCSEEESSSCEEECCSSCSSEEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCeEeecceEEeccCCCCCeEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence 13678899899998878888888776 458999999999999999999999999875
No 75
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=97.60 E-value=0.00015 Score=79.99 Aligned_cols=94 Identities=21% Similarity=0.189 Sum_probs=67.2
Q ss_pred ccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCCc
Q 004443 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (753)
Q Consensus 93 ~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~kp 172 (753)
-..+|.|.+... ++++.|||.|=+++|-|-|.....+ -..
T Consensus 244 li~~g~l~~~~~--~~~~~r~~fLF~d~Ll~~k~~~~~~--------------------------------------y~~ 283 (434)
T 3mpx_A 244 FLKEGTLMKVTG--KNRRPRHLFLMNDVLLYTYPQKDGK--------------------------------------YRL 283 (434)
T ss_dssp EEECCEEEEEET--TEEEEEEEEEESSEEEEEEECTTSC--------------------------------------EEE
T ss_pred eEecceEEEEeC--CCceEEEEEEECCEEEEEEecCCCe--------------------------------------EEE
Confidence 467899988753 5689999999999999998644321 114
Q ss_pred ccEEEcCceEEEecCCC--CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 173 FGEVHLKVSSIRDSKSD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 173 ~G~I~L~~ssi~~~~~d--~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
++.|.|....|.....+ ...|.|.++.++|.|+|.|+++++.||++|+.|+...
T Consensus 284 k~~i~L~~l~v~~~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 284 KNTLAVANMKVSRPVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp EEEEEC-----CCCCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC----
T ss_pred EEEEEcCCcEEEecCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 57777877766543332 5678899999999999999999999999999998754
No 76
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.57 E-value=0.00034 Score=65.38 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=32.0
Q ss_pred CCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 189 DDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 189 d~~rF~I~t~t--kt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
.++.|+|+.++ ++++|.|.|+++++.|+.+|+.......
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~~ 124 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHSG 124 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC---
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence 36779988876 6999999999999999999998876543
No 77
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.56 E-value=0.00053 Score=75.33 Aligned_cols=113 Identities=19% Similarity=0.149 Sum_probs=77.9
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.-+.+|.|.++... +.|+.|||.|=+++|-|-+.++. +..+.. .+ +...+. ......
T Consensus 294 ~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~-k~~~~~-----------~~-------~~~~~~---~~~~~~ 350 (418)
T 3t06_A 294 KMIHEGPLTWRISK-DKTLDLHVLLLEDLLVLLQKQDE-KLLLKC-----------HS-------KTAVGS---SDSKQT 350 (418)
T ss_dssp CEEEEEEEEECCBT-TBCCEEEEEEESSEEEEEEECSS-CEECCC----------------------------------C
T ss_pred eeEEeceEEEEeCC-CCeEEEEEEecCCEEEEEEEcCC-ceEEee-----------cc-------cccccC---CCcccc
Confidence 45689999977543 34999999999999999887543 111100 00 000000 011122
Q ss_pred cccEEEcCceEEEecCCCCCcEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 172 PFGEVHLKVSSIRDSKSDDKRFSIFTG-----TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~rF~I~t~-----tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
-++.|.|....|+....+.+.|.|... .++|.|+|.|.++++.||++|+.|++-.+
T Consensus 351 ~k~~i~l~~~~v~~~~~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~~ 411 (418)
T 3t06_A 351 FSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNAH 411 (418)
T ss_dssp CCSEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC-
T ss_pred cCCceechhceeccccccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcCc
Confidence 467899999999887788889998763 38999999999999999999999988643
No 78
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.47 E-value=0.001 Score=71.90 Aligned_cols=113 Identities=15% Similarity=0.131 Sum_probs=76.8
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.-+.+|.|.+.+..+ .|+.|||.|=+++|-|.+.++. +..+..- + .+..+. ......
T Consensus 258 ~li~eG~l~~~~~~~-~~~~~~~fLF~d~Ll~~k~k~~-k~~~k~~--------~----------~~~~~~---~~~k~~ 314 (377)
T 3p6a_A 258 KLVHEGPLTWRVTKD-KAVEVHVLLLDDLLLLLQRQDE-RLLLKSH--------S----------RTLTPT---PDGKTM 314 (377)
T ss_dssp CEEEEEEEEEESSSS-CEEEEEEEEESSEEEEEEEETT-EEECCCC--------C----------CC------------C
T ss_pred eEEEECCcEEEecCC-CeEEEEEEeeCCEEEEEEEcCc-eeEEeec--------c----------cccccC---ccccCC
Confidence 467899997765443 6999999999999999987543 2111000 0 000000 011111
Q ss_pred cccEEEcCceEEEecCCCCCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 172 PFGEVHLKVSSIRDSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~rF~I~t----~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
..+.|.|....+++...+.+.|.++. +...|.|.|.|.+|++.||++|+.|++.+.
T Consensus 315 ~~~~i~l~~~~v~e~~~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~k 374 (377)
T 3p6a_A 315 LRPVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 374 (377)
T ss_dssp SCSEEEGGGEEEEECTTCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTCC
T ss_pred CCCeEechhhhccccccccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence 34578898888888777777777554 457999999999999999999999998753
No 79
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.42 E-value=0.0013 Score=70.83 Aligned_cols=111 Identities=18% Similarity=0.163 Sum_probs=75.5
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.-.++|.|.+... .+.++.|++.|=+++|-|.+.+++ +..+.... + ...|. ......
T Consensus 252 ~li~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~-k~~~~~~~----------------~--~~~~~---~~~~~~ 308 (368)
T 1xcg_A 252 KMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDE-KLLLKCHS----------------K--TAVGS---SDSKQT 308 (368)
T ss_dssp CEEEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSS-CEECCC----------------------------------C
T ss_pred eEEeecceEeeec-CCCeeEEEEEcccccHHHhhcccc-cceeeecc----------------c--cccCC---CCcccC
Confidence 3567999986543 346999999999999999887543 21110000 0 00000 011122
Q ss_pred cccEEEcCceEEEecCCCCCcEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 172 PFGEVHLKVSSIRDSKSDDKRFSIFTG-----TKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~rF~I~t~-----tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
-++.|.|....|+....+.+.|.|++. .++|.|+|.|+++++.||++|+.|++.
T Consensus 309 ~~~~i~l~~~~v~~~~~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 309 FSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp CCSEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCCceEccceeeecccCCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 468899988888876677788987763 489999999999999999999999864
No 80
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=97.41 E-value=0.0019 Score=59.06 Aligned_cols=96 Identities=14% Similarity=0.094 Sum_probs=65.2
Q ss_pred cEEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCCc
Q 004443 94 GISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (753)
Q Consensus 94 ~~eG~L~K~~n-~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~kp 172 (753)
..+|.|.|-.. ..+.=++++|.|=+.+|-|-+...... + .-+-
T Consensus 9 v~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~---------~---------------------------~~~~ 52 (113)
T 1zc3_B 9 VYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRR---------G---------------------------MYRY 52 (113)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTT---------S---------------------------CEEE
T ss_pred EEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCc---------c---------------------------cEEE
Confidence 46899988743 223335578888777888877643210 0 0012
Q ss_pred ccEEEcCceEEEe---cCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 173 FGEVHLKVSSIRD---SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 173 ~G~I~L~~ssi~~---~~~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
...+.|..-.|.. ...-.+.|.|.++.+++.++|+|.+|+.+||.+|+.|+..
T Consensus 53 ~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 53 NALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp EEEEETTTCEEEEECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcccCEEEECCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 3355665544332 2223788999999999999999999999999999999854
No 81
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=97.35 E-value=0.0009 Score=73.32 Aligned_cols=96 Identities=24% Similarity=0.250 Sum_probs=72.7
Q ss_pred ccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCCc
Q 004443 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (753)
Q Consensus 93 ~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~kp 172 (753)
..++|.|.++....+.++.|++.|=+.+|-|-|.++. + -..
T Consensus 234 li~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~-~--------------------------------------y~~ 274 (406)
T 2vrw_B 234 PKIDGELKITSVERRSKTDRYAFLLDKALLICKRRGD-S--------------------------------------YDL 274 (406)
T ss_dssp EEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEETT-E--------------------------------------EEE
T ss_pred ccccccEEEEecCCCccceEEEEecCCEEEEEEecCC-c--------------------------------------eEE
Confidence 5679999988655567899999999999999887532 1 013
Q ss_pred ccEEEcCceEEEecCCC-------CCcEEEEe--CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 173 FGEVHLKVSSIRDSKSD-------DKRFSIFT--GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 173 ~G~I~L~~ssi~~~~~d-------~~rF~I~t--~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
++.|.|....|....+. ...|.|.. +.+.|.|.|.|+++++.||++|+.|+....
T Consensus 275 k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 275 KASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp EEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 56778877776654432 26788876 578999999999999999999999987643
No 82
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.35 E-value=0.0009 Score=63.08 Aligned_cols=96 Identities=18% Similarity=0.185 Sum_probs=69.0
Q ss_pred EEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCCcccE
Q 004443 96 SGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGE 175 (753)
Q Consensus 96 eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~kp~G~ 175 (753)
.|-...+....++=+.|+|+|=+++|.|.+..... ..-+-+|.
T Consensus 31 ~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~~~-------------------------------------~~f~~kgk 73 (132)
T 1v61_A 31 MSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRM-------------------------------------SGFMYQGK 73 (132)
T ss_dssp EEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSS-------------------------------------SCCEEEEE
T ss_pred EeeEEEEEcccCcceEEEEEEcCCeEEEEEecCCC-------------------------------------ceEEEEEE
Confidence 34444333233455789999999999988852210 01224688
Q ss_pred EEcCceEEEecCC---CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 176 VHLKVSSIRDSKS---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 176 I~L~~ssi~~~~~---d~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
+.|..-.|....+ ..+.|.|.... +++.+.|.|++|+++||++|+.++..+++
T Consensus 74 lPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~~~~ 130 (132)
T 1v61_A 74 IPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSGPS 130 (132)
T ss_dssp ECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHTTSCS
T ss_pred EecceeEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 8888777664321 25689998776 89999999999999999999999998764
No 83
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.32 E-value=0.0012 Score=73.78 Aligned_cols=101 Identities=18% Similarity=0.166 Sum_probs=74.8
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.-+++|.|.+.....+.++.|+|.|=+++|-|-|...... ..-.
T Consensus 333 ~li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~------------------------------------~~~~ 376 (466)
T 2pz1_A 333 ELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRR------------------------------------DVLY 376 (466)
T ss_dssp CEEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCT------------------------------------TCEE
T ss_pred eeEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccC------------------------------------CceE
Confidence 3568999998865444589999999999999988642100 0011
Q ss_pred cccEEEcCceEEEecCCC---------CCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 172 PFGEVHLKVSSIRDSKSD---------DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d---------~~rF~I~t~--tkt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
.++.|.|....|....+. .+.|.|... .+.|.|+|.|.++++.||++|+.++.....
T Consensus 377 ~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~ 444 (466)
T 2pz1_A 377 YKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQL 444 (466)
T ss_dssp EEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred EeeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 457888888777654332 246888764 579999999999999999999999887543
No 84
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.30 E-value=0.0012 Score=72.49 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=74.1
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.-.++|.|.+.....+.++.|+|.|=+.+|-|-|...... ..-.
T Consensus 256 ~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~------------------------------------~~~~ 299 (402)
T 2dfk_A 256 ELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRR------------------------------------DILY 299 (402)
T ss_dssp CEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCT------------------------------------TCEE
T ss_pred ceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccC------------------------------------CceE
Confidence 3568999998865334589999999999999988642100 0011
Q ss_pred cccEEEcCceEEEecCCC---------CCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 172 PFGEVHLKVSSIRDSKSD---------DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d---------~~rF~I~t~--tkt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
.++.|.|....|....+. .+.|.|... .+.|.|+|.|+++++.||++|+.++.....
T Consensus 300 ~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~ 367 (402)
T 2dfk_A 300 YKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQE 367 (402)
T ss_dssp EEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 457788887776654332 257888764 579999999999999999999999887543
No 85
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.29 E-value=0.0016 Score=74.32 Aligned_cols=113 Identities=15% Similarity=0.131 Sum_probs=76.6
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.-+++|.|.+.+..+ .|+.|||.|=+++|-|.|.+.+ +..+..- + + +.... ......
T Consensus 411 ~LI~eG~l~~~~~~~-k~~~r~~fLF~D~LL~~k~k~~-ky~~k~~--------~--------~--~~~~~---~d~k~~ 467 (536)
T 3odw_A 411 KLVHEGPLTWRVTKD-KAVEVHVLLLDDLLLLLQRQDE-RLLLKSH--------S--------R--TLTPT---PDGKTM 467 (536)
T ss_dssp CEEEEEEEEEESCC----CEEEEEEESSEEEEEEEETT-EEECCCC---------------------------------C
T ss_pred eeeeecceEEEecCC-CeeEEEEEEcCCEEEEEEEcCC-eEEEeec--------c--------c--ccccc---cccccc
Confidence 467899998876433 6899999999999999987543 2111000 0 0 00000 011112
Q ss_pred cccEEEcCceEEEecCCCCCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 172 PFGEVHLKVSSIRDSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~rF~I~t----~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
..+.|.|....|++...+.+.|.++. +.++|.|+|.|++|++.||++|+.|++.+.
T Consensus 468 ~~~~i~L~~l~v~e~~~d~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 468 LRPVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp CCSEEEGGGEEEEECTTCTTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred cCceeecccceeecccccCCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 35689999999998888888877655 457999999999999999999999998754
No 86
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.26 E-value=0.0015 Score=62.01 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=64.8
Q ss_pred CCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCCcccEEEcCceEEEe
Q 004443 106 GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD 185 (753)
Q Consensus 106 ~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~~ 185 (753)
.||=+.|+|-|=+++|-|-|.....+. ...-..++.+.|.+-.|..
T Consensus 30 ~kg~qqR~~FLFND~LL~TK~~~kkk~----------------------------------~~~Y~vr~~~~L~gm~V~~ 75 (140)
T 3qwm_A 30 KLGLHQREIFLFNDLLVVTKIFQKKKN----------------------------------SVTYSFRQSFSLYGMQVLL 75 (140)
T ss_dssp CTTTTEEEEEEESSCEEEEECCC---C----------------------------------CCCCCCEEEECCTTEEEEE
T ss_pred cccccceEEEEecchhhheeecccCCC----------------------------------CCceEEEEEeeecceEEEc
Confidence 467899999999999999984332110 0112356777888777665
Q ss_pred cCCC--CCcEEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 186 SKSD--DKRFSIFTGT------KRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 186 ~~~d--~~rF~I~t~t------kt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
.... +..|.|.+.. +++.|.|.|.+||..||++|+.+++...
T Consensus 76 ~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 76 FENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp ECCSSCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 5444 5677888742 6799999999999999999999998754
No 87
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.24 E-value=0.0015 Score=61.20 Aligned_cols=95 Identities=17% Similarity=0.253 Sum_probs=68.5
Q ss_pred CCccEEEEEEeecC--------CCCCceeeEEEEeC------CeEEEEeecCCCccccchhccccceeeccchhhhhhhc
Q 004443 91 VGNGISGVLYKWVN--------YGKGWRPRWFVLQD------GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKR 156 (753)
Q Consensus 91 ~~~~~eG~L~K~~n--------~~kgWk~RWFVL~~------g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~ 156 (753)
+-..+||.|.-+.. -...|+++|+||.. -+|-||....
T Consensus 16 ~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPk---------------------------- 67 (136)
T 1v5m_A 16 VDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPK---------------------------- 67 (136)
T ss_dssp CSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTT----------------------------
T ss_pred ceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCc----------------------------
Confidence 34568999966532 34569999999932 2678886422
Q ss_pred ccccccccccccCCCcccEEEcCce-EEEec-----CCCCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 157 KHKKETTSQRLLNRKPFGEVHLKVS-SIRDS-----KSDDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 157 ~~~~~~~~~~~~~~kp~G~I~L~~s-si~~~-----~~d~~rF~I~t~tk-t~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.+||+..|.+..+ .||.. .+.++.|.|.+..+ .|.|.|.++.++..|+..|+.+...
T Consensus 68 ------------ssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 68 ------------ASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp ------------SSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ------------ccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 2457777777543 34432 33478899998766 8999999999999999999888654
No 88
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=97.20 E-value=0.0012 Score=76.22 Aligned_cols=96 Identities=23% Similarity=0.205 Sum_probs=73.9
Q ss_pred ccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCCc
Q 004443 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (753)
Q Consensus 93 ~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~kp 172 (753)
..++|.|.++....+.++.|||.|=+++|-|-|..+. + -..
T Consensus 406 ll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~-~--------------------------------------y~~ 446 (587)
T 3ky9_A 406 PKIDGELKITSVERRSKMDRYAFLLDKALLICKRRGD-S--------------------------------------YDL 446 (587)
T ss_dssp EEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEETT-E--------------------------------------EEE
T ss_pred eEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecCC-E--------------------------------------EEe
Confidence 5679999998877788999999999999999987532 1 114
Q ss_pred ccEEEcCceEEEecCCC-------CCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 173 FGEVHLKVSSIRDSKSD-------DKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 173 ~G~I~L~~ssi~~~~~d-------~~rF~I~t~t--kt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
++.|.|....|...... .+.|.|.... ++|.|.|.|+++++.||++|+.|+....
T Consensus 447 k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 447 KDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp EEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred eeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 57788888777765432 2568888754 8999999999999999999999998654
No 89
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.17 E-value=0.0026 Score=69.03 Aligned_cols=114 Identities=16% Similarity=0.197 Sum_probs=74.6
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.-.++|.|.+.... +.++.|++.|=+++|-|-|.+++ +..+.. .+ +.+ .+. ......
T Consensus 256 ~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~-~~~~~~-----------~~-~~~------~~~---~~~~~~ 312 (385)
T 1txd_A 256 KMIHEGPLVWKVNR-DKTIDLYTLLLEDILVLLQKQDD-RLVLRC-----------HS-KIL------AST---ADSKHT 312 (385)
T ss_dssp CEEEEEEEEEESSS-SCBCCEEEEEESSEEEEEEEETT-EEECCC----------------------------------C
T ss_pred eEEEECcEEEEcCC-CCeEEEEEEecCCeeEEEEecCC-eeEEee-----------cc-ccc------ccc---CCCCcC
Confidence 45689999865432 45899999999999999887543 211100 00 000 000 011123
Q ss_pred cccEEEcCceEEEecCCCCCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 172 PFGEVHLKVSSIRDSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~rF~I~t----~tkt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
.++.|.|....|+....+.+.|.+++ +.++|.|+|.|+++++.||++|+.+++.+..
T Consensus 313 ~~~~i~l~~~~v~~~~~d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~ 373 (385)
T 1txd_A 313 FSPVIKLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKE 373 (385)
T ss_dssp CCSEEEGGGEEEEECCC-CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceecccccccccccCCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccC
Confidence 46889998888877655656555443 3689999999999999999999999987654
No 90
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.17 E-value=0.0014 Score=66.62 Aligned_cols=93 Identities=17% Similarity=0.278 Sum_probs=66.1
Q ss_pred ccEEEEEEeecCCCCCceeeEEEEeC------C-eEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccc
Q 004443 93 NGISGVLYKWVNYGKGWRPRWFVLQD------G-VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (753)
Q Consensus 93 ~~~eG~L~K~~n~~kgWk~RWFVL~~------g-~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~ 165 (753)
..+||+...+ .+|.||+||.||+. . .|.-||++.+.
T Consensus 9 ~v~eg~vk~r--~~KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr----------------------------------- 51 (224)
T 3ml4_A 9 ALVEGQVKLR--DGKKWKSRWLVLRKPSPVADCLLMLVYKDKCER----------------------------------- 51 (224)
T ss_dssp CSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHHH-----------------------------------
T ss_pred eeEEEeeeee--cCCceeeEEEEEEcCCCchheEEEEEEcChhhh-----------------------------------
Confidence 4679999776 45789999999954 2 57788864431
Q ss_pred cccCCCcccEEEcCceE-EEe---cCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 004443 166 RLLNRKPFGEVHLKVSS-IRD---SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (753)
Q Consensus 166 ~~~~~kp~G~I~L~~ss-i~~---~~~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~ 223 (753)
.++.+++..|.|.... +.. -+.....+.|++.+.++.|..+|++.+.+|-..|+...
T Consensus 52 -~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~sl 112 (224)
T 3ml4_A 52 -SKGLRERSSLTLEDICGLEPALPYEGLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYAL 112 (224)
T ss_dssp -HSCCCCSEEEEECCEEEEEEEEEETTEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHHT
T ss_pred -hcCCcccceeehHHhcCccccccccCcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhcc
Confidence 2345678888888654 211 11224556799999999999999999999999888753
No 91
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=97.15 E-value=0.0018 Score=69.41 Aligned_cols=101 Identities=18% Similarity=0.251 Sum_probs=74.0
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.-.++|.|.+++ .++.|+|.|=+.+|-|-|...... ++.|. ....-+
T Consensus 246 ~li~eG~l~~~g----~~~~~~~fLF~d~Ll~~k~~~~~~-----------~~~~~------------------~~~~y~ 292 (354)
T 1dbh_A 246 EFIMEGTLTRVG----AKHERHIFLFDGLMICCKSNHGQP-----------RLPGA------------------SNAEYR 292 (354)
T ss_dssp CEEEEEEEEETT----CSSCEEEEEESSEEEEEEECTTCC-----------CCTTS------------------CCCSEE
T ss_pred eEEEEeeEEEEe----cCceEEEEEeCCEEEEEecCCCCC-----------CCCCC------------------CCccee
Confidence 356899999983 589999999888999988753200 00000 001122
Q ss_pred cccEEEcCceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 172 PFGEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d---~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
.++.|.|....|....+. .+.|.|.... +.|.|+|.|++++..|+++|+.++..
T Consensus 293 ~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~~ 350 (354)
T 1dbh_A 293 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYR 350 (354)
T ss_dssp EEEEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 568899998888765432 5789998874 89999999999999999999999763
No 92
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.10 E-value=0.0043 Score=66.83 Aligned_cols=105 Identities=20% Similarity=0.276 Sum_probs=73.9
Q ss_pred CccEEEEEEeecCCCC-----------CceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccc
Q 004443 92 GNGISGVLYKWVNYGK-----------GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKK 160 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~k-----------gWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~ 160 (753)
...++|.|.+|....+ .++.|+|.|=+++|-|-|...... .+ .. .
T Consensus 209 ~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~--------~~-----~~-----------~ 264 (353)
T 1kz7_A 209 KLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENG--------EG-----YE-----------K 264 (353)
T ss_dssp CEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCC--------SS-----CC-----------C
T ss_pred hhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccc--------cC-----CC-----------C
Confidence 4678999998753222 378999999888999988753200 00 00 0
Q ss_pred ccccccccCCCcccEEEcCceEEEecC-CCCCcEEEEe--CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 161 ETTSQRLLNRKPFGEVHLKVSSIRDSK-SDDKRFSIFT--GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 161 ~~~~~~~~~~kp~G~I~L~~ssi~~~~-~d~~rF~I~t--~tkt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
...-.-++.|.|....|.+.. .+.+.|.|.. +.+.|.|+|.|+++++.|+++|+.|+...
T Consensus 265 ------~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 265 ------APSYSYKQSLNMTAVGITENVKGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp ------SCEEEEEEEEEGGGEEEECCBTTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ------CCeEEEEEEeEcccceeeEcCCCCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 000114567888777776654 3578899876 46899999999999999999999998754
No 93
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=96.68 E-value=0.0089 Score=63.01 Aligned_cols=100 Identities=13% Similarity=0.185 Sum_probs=72.5
Q ss_pred CccEEEEEEeecC--CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccC
Q 004443 92 GNGISGVLYKWVN--YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (753)
Q Consensus 92 ~~~~eG~L~K~~n--~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~ 169 (753)
....+|-+..|.. ..+..+.|+|.|=+.+|-|-|...... + ...
T Consensus 202 ~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~-----------------------------~-----~~~ 247 (311)
T 1nty_A 202 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSS-----------------------------G-----RSK 247 (311)
T ss_dssp CEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTT-----------------------------C-----CEE
T ss_pred CceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCC-----------------------------C-----Cce
Confidence 3556788887743 345689999999888999988643200 0 000
Q ss_pred CCcccEEEcCceEEEecC-CCCCcEEEEe-----CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 170 RKPFGEVHLKVSSIRDSK-SDDKRFSIFT-----GTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~-~d~~rF~I~t-----~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
-..++.|.|....|.+.. .+++.|.|.. +.+.|.|+|.|+++++.|+++|+.++..
T Consensus 248 y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 248 YLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp EEEEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEeeeeeccceeeEEccCCCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence 124678888887776543 3467899876 3578999999999999999999999874
No 94
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=96.49 E-value=0.021 Score=61.48 Aligned_cols=103 Identities=14% Similarity=0.155 Sum_probs=70.6
Q ss_pred CccEEEEEEeecC-----CCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhccccccccccc
Q 004443 92 GNGISGVLYKWVN-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (753)
Q Consensus 92 ~~~~eG~L~K~~n-----~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~ 166 (753)
....+|-+..+.. ..+.++.|++.|=+++|-|-|...... . | + .
T Consensus 206 ~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~-~------------~--------------~----~ 254 (354)
T 2rgn_B 206 KLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGV-R------------G--------------G----T 254 (354)
T ss_dssp CEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------------------------------------
T ss_pred cccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCC-C------------C--------------C----C
Confidence 3456777765532 124689999999999999988654210 0 0 0 0
Q ss_pred ccCCCcccEEEcCceEEEecC-CCCCcEEEEe-----CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 167 LLNRKPFGEVHLKVSSIRDSK-SDDKRFSIFT-----GTKRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~-~d~~rF~I~t-----~tkt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
...-..++.|.|....|.... .+.+.|.|.. +...|.|+|.|.++++.||++|+.|+..
T Consensus 255 ~~~y~~k~~i~l~~~~v~~~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 255 QPGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp -CCEEEEEEEEGGGEEEEESGGGCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCceEEcceeeccceeeeeccCCCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 001124677888887777653 4578999876 2479999999999999999999999865
No 95
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=96.28 E-value=0.00066 Score=76.07 Aligned_cols=108 Identities=20% Similarity=0.211 Sum_probs=0.0
Q ss_pred ccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC-
Q 004443 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK- 171 (753)
Q Consensus 93 ~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k- 171 (753)
-..+|.|.|. ++++.|||.|=+++|-|.+.....+.. .|.+. .. ... .....+
T Consensus 253 li~eG~l~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~-----------~g~~~--~f-----~~~----~~~~~~v 306 (510)
T 3jzy_A 253 LLHSGKLYKT----KSNKELHGFLFNDFLLLTYMVKQFAVS-----------SGSEK--LF-----SSK----SNAQFKM 306 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEeceEEEc----CCCcEEEEEcccceeEEeeeccccccc-----------CCccc--cc-----Ccc----cccceeE
Confidence 4567777764 568999999988888888853321000 00000 00 000 000111
Q ss_pred cccEEEcCceEEEec---CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 172 PFGEVHLKVSSIRDS---KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 172 p~G~I~L~~ssi~~~---~~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
-++.|.|....|... ....+.|.|..+.++|.|+|.|++++..||++|+.|+..+
T Consensus 307 ~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 307 YKTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp ----------------------------------------------------------
T ss_pred EcCceehhheEEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 145666666655543 2346789999999999999999999999999999998754
No 96
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=96.28 E-value=0.013 Score=62.50 Aligned_cols=92 Identities=15% Similarity=0.184 Sum_probs=63.0
Q ss_pred ccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC-
Q 004443 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK- 171 (753)
Q Consensus 93 ~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k- 171 (753)
-..+|.|.+. +| +.|++.|=+.+|-|-|...... + ..-+
T Consensus 232 li~~G~l~~~----~~-~~~~~fLF~d~Ll~~k~~~~~~---------~--------------------------~~~~v 271 (346)
T 2z0q_A 232 LCCHGELKNN----RG-VKLHVFLFQEVLVITRAVTHNE---------Q--------------------------LCYQL 271 (346)
T ss_dssp EEEEEEEEET----TS-CEEEEEEESSEEEEEEEEEETT---------E--------------------------EEEEE
T ss_pred EEEeceeEEC----CC-cEEEEEECCCcEEEEEEeccCC---------c--------------------------eeeee
Confidence 3578999763 22 8999999888998888632100 0 0000
Q ss_pred cccEEEcCceEEEecCCC------------------CCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 172 PFGEVHLKVSSIRDSKSD------------------DKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d------------------~~rF~I~t----~tkt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
-++.|.|....|....+. .+.|.|.. +.++|.|+|.|+++++.||++|+.|++
T Consensus 272 ~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~aie 346 (346)
T 2z0q_A 272 YRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKE 346 (346)
T ss_dssp SSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhhC
Confidence 235566666655544322 35788874 368999999999999999999999863
No 97
>2rr3_B OSBP, oxysterol-binding protein 1; lipid transport, transport, protein-peptide complex, major S protein domain, protein binding; NMR {Homo sapiens}
Probab=95.41 E-value=0.012 Score=44.59 Aligned_cols=21 Identities=29% Similarity=0.678 Sum_probs=17.7
Q ss_pred CCCCccccCcccccccccccc
Q 004443 348 EDETDEDENTFFDTRDFLSSS 368 (753)
Q Consensus 348 ~~~s~~de~~F~Da~~~~~~~ 368 (753)
|.+++|||+|||||.+|++.+
T Consensus 11 e~SdEDed~EfFDA~efITv~ 31 (47)
T 2rr3_B 11 DMSDEDDENEFFDAPEIITMP 31 (47)
T ss_dssp CSCCCCCSSCCBCCCSSCSSC
T ss_pred cccccccccccccccceeEcc
Confidence 566777889999999998876
No 98
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=95.12 E-value=0.15 Score=54.91 Aligned_cols=59 Identities=15% Similarity=0.158 Sum_probs=45.3
Q ss_pred CCcccEEEcCceEEEecCCCC----CcEEEE--------eCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 004443 170 RKPFGEVHLKVSSIRDSKSDD----KRFSIF--------TGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (753)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d~----~rF~I~--------t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~~ 228 (753)
.+-++.|.|....|....+.+ ..|.|. .+.+.|.|+|.|++++++||++|+.++....+
T Consensus 300 y~~k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~ 370 (377)
T 1foe_A 300 FRFRHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHR 370 (377)
T ss_dssp CCCEEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEeeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhh
Confidence 345788999888887654332 347776 24689999999999999999999999876443
No 99
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=94.52 E-value=0.1 Score=64.18 Aligned_cols=100 Identities=18% Similarity=0.264 Sum_probs=70.6
Q ss_pred CccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCCC
Q 004443 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~k 171 (753)
.-.++|.|.|.+ ++ +.|||.|=+++|-|-|.....+ ++.|. ....-.
T Consensus 443 ~Li~eG~l~~~~---~k-~~r~~FLF~D~Ll~~K~~~~~~-----------~~~g~------------------~~~~y~ 489 (1049)
T 3ksy_A 443 EFIMEGTLTRVG---AK-HERHIFLFDGLMICCKSNHGQP-----------RLPGA------------------SNAEYR 489 (1049)
T ss_dssp CCCCEEEEEETT---CS-SCEEEEEETTEEEEEECCTTCC-----------CCTTS------------------CCCSCC
T ss_pred eEEEeceEEEEc---cC-ceEEEEeeCCeEEEEEecCccC-----------CCCCC------------------CCCceE
Confidence 356899999876 23 8999999999999988653210 00000 011233
Q ss_pred cccEEEcCceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 172 PFGEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 172 p~G~I~L~~ssi~~~~~d---~~rF~I~t~t-kt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
.++.|.|....|....+. ...|.|.... ..|.|+|.|.++++.||++|+.++.
T Consensus 490 ~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 490 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp CCCEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 678888887776654433 3678887754 5999999999999999999988764
No 100
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=93.38 E-value=0.42 Score=56.24 Aligned_cols=96 Identities=16% Similarity=0.260 Sum_probs=57.9
Q ss_pred CccEEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 92 GNGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 92 ~~~~eG~L~K~~n~~-kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
..++.|++.|+++.+ ..||+|+|.|..+.|........
T Consensus 558 ~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~~~----------------------------------------- 596 (689)
T 3v5w_A 558 DCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEA----------------------------------------- 596 (689)
T ss_dssp CCCEEEEEEEC-------CEEEEEEEETTEEEEECTTSC-----------------------------------------
T ss_pred cceeecccccCCCcccchhhhhccccCCCcccccccCCC-----------------------------------------
Confidence 467899999998754 58999999998888876642110
Q ss_pred CcccEEEcCceE-EEec-CCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 004443 171 KPFGEVHLKVSS-IRDS-KSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (753)
Q Consensus 171 kp~G~I~L~~ss-i~~~-~~d~~rF~I~t-~tkt~~LrAeS~edr~~WI~AL~~a~~~~~~~ 229 (753)
+...+.+.... |... ......|.+.. ..|+|.+.+.|..++.+|..+|+.+-....++
T Consensus 597 -~~~l~~~~~v~~v~k~~i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~~~~~~ 657 (689)
T 3v5w_A 597 -PQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYREAQQL 657 (689)
T ss_dssp -CCEEEEGGGEEEEEEEESSSCEEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CcceeeeccccccccCcCCCCcceeeeecCCcEEEEECCChHHHHHHHHHHHHHHHHHHHH
Confidence 11112221111 1000 01123344443 67999999999999999999999886554443
No 101
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=89.75 E-value=0.75 Score=42.30 Aligned_cols=103 Identities=13% Similarity=0.134 Sum_probs=72.3
Q ss_pred cCCCCccEEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccc
Q 004443 88 NDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (753)
Q Consensus 88 ~~~~~~~~eG~L~K~~n~~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~ 167 (753)
.......++|.+.-|....| =+.|+.-|=+..|-+.|..... + .
T Consensus 5 ~~~G~Ll~q~~f~V~~~~~k-~~eR~vFLFe~~ilf~K~~~~~------------------------------~-----~ 48 (119)
T 1fho_A 5 GKLGRIIRHDAFQVWEGDEP-PKLRYVFLFRNKIMFTEQDAST------------------------------S-----P 48 (119)
T ss_dssp CCCCCSSEEEEEEECSTTCS-CEEEEEEEETTEEEEEEECCSS------------------------------S-----S
T ss_pred HHcCCccccCceEEEeCCCC-cceEEEEEecCcEEEEEEecCC------------------------------C-----C
Confidence 34456778999999965433 4557777777777777864110 0 0
Q ss_pred cCCCcccEEEcCceEEEecCC--CCCcEEEEeCC--eEEEE--EcCCHH-HHHHHHHHHHHHHHhc
Q 004443 168 LNRKPFGEVHLKVSSIRDSKS--DDKRFSIFTGT--KRLHL--RAETRE-DRFAWMEALQAVKDMF 226 (753)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~~~--d~~rF~I~t~t--kt~~L--rAeS~e-dr~~WI~AL~~a~~~~ 226 (753)
..-.-+..|.|....|.++.. |+++|.|-.+. ..|.+ +|.|.+ .++.||+.|+..++.+
T Consensus 49 ~~Y~~K~~ikl~~~~lte~~~~~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~ 114 (119)
T 1fho_A 49 PSYTHYSSIRLDKYNIRQHTTDEDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEKY 114 (119)
T ss_dssp CCCSSCCEEESSSCEEEEECTTCCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHH
T ss_pred CcEEEeeEEeeceeEEEecCCCCCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHHH
Confidence 112246788888888888765 46789986643 57778 999999 9999999999876654
No 102
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=88.44 E-value=3.1 Score=49.50 Aligned_cols=90 Identities=24% Similarity=0.327 Sum_probs=56.9
Q ss_pred ccEEEEEEeec-CC-CCCceeeEEEEeCCeEEEEeecCCCccccchhccccceeeccchhhhhhhcccccccccccccCC
Q 004443 93 NGISGVLYKWV-NY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (753)
Q Consensus 93 ~~~eG~L~K~~-n~-~kgWk~RWFVL~~g~LsYYk~~~~~~~~~~~~~~~~~~viG~~s~r~~~~~~~~~~~~~~~~~~~ 170 (753)
.+..|||.... +. ..|=|.-||||.-..|++||......
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 580 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKE--------------------------------------- 580 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCC---------------------------------------
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchhhhc---------------------------------------
Confidence 67889999863 33 34688899999999999999843310
Q ss_pred CcccEEEcCceEEEecC----CCCCcEEEEeC--------CeEEEEEcCCHHHHHHHHHHHHHH
Q 004443 171 KPFGEVHLKVSSIRDSK----SDDKRFSIFTG--------TKRLHLRAETREDRFAWMEALQAV 222 (753)
Q Consensus 171 kp~G~I~L~~ssi~~~~----~d~~rF~I~t~--------tkt~~LrAeS~edr~~WI~AL~~a 222 (753)
-+=.+.|....++... +....|.|+.+ .|++.|.|+|.++.+.|...+-.|
T Consensus 581 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 643 (772)
T 3zvr_A 581 -KKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 643 (772)
T ss_dssp -EEEEEECTTEEEEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHHHHHT
T ss_pred -ccccccccccccchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHhhhhc
Confidence 0112223222222211 12345677653 368999999999999999877444
No 103
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=84.37 E-value=2.2 Score=44.31 Aligned_cols=52 Identities=21% Similarity=0.324 Sum_probs=41.7
Q ss_pred ccEEEcCceEEEecC--C--CCCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 173 FGEVHLKVSSIRDSK--S--DDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 173 ~G~I~L~~ssi~~~~--~--d~~rF~I~t~--tkt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
.+.|.|+-|.+.... . ..+.|.|.++ ..++.|+|++.++..+|++||..++.
T Consensus 205 ~~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 205 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp CEEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 478889988865422 2 3567889885 57899999999999999999999864
No 104
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=84.36 E-value=2.7 Score=50.44 Aligned_cols=35 Identities=29% Similarity=0.315 Sum_probs=29.4
Q ss_pred CCcEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 190 DKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 190 ~~rF~I~t~t-----kt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
++.|+|+.+. +.++|.|.++++.+.|++.|+....
T Consensus 103 ~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~ 142 (816)
T 3qr0_A 103 DKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAY 142 (816)
T ss_dssp HHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred ccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 5779988865 4569999999999999999988654
No 105
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=81.64 E-value=3.2 Score=40.80 Aligned_cols=52 Identities=21% Similarity=0.317 Sum_probs=42.1
Q ss_pred ccEEEcCceEEEecC----CCCCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 004443 173 FGEVHLKVSSIRDSK----SDDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKD 224 (753)
Q Consensus 173 ~G~I~L~~ssi~~~~----~d~~rF~I~t~--tkt~~LrAeS~edr~~WI~AL~~a~~ 224 (753)
...|.|+-|.|.... ...+.|.|.++ ..+..|||.+..+.++|++||.+.+.
T Consensus 120 ~~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 120 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp CEEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred ceeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 467999999875432 13677999985 57999999999999999999998864
No 106
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=76.33 E-value=8.6 Score=46.48 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=31.3
Q ss_pred CCCCcEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 188 SDDKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 188 ~d~~rF~I~t~t-----kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
..++.|+|+.+. ++++|.|.++++.+.|+..|+.....
T Consensus 98 ~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~ 140 (885)
T 3ohm_B 98 LEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN 140 (885)
T ss_dssp -CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred ccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence 347889998874 47999999999999999999886553
No 107
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=73.86 E-value=10 Score=45.33 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=30.9
Q ss_pred CCcEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 004443 190 DKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKDM 225 (753)
Q Consensus 190 ~~rF~I~t~t-----kt~~LrAeS~edr~~WI~AL~~a~~~ 225 (753)
++.|+|+.+. ++++|.|.|+++++.|+..|+.....
T Consensus 96 ~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~ 136 (799)
T 2zkm_X 96 LKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKH 136 (799)
T ss_dssp GTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred cceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 6789988764 47999999999999999999987664
No 108
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=42.61 E-value=1.1e+02 Score=29.63 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=32.5
Q ss_pred CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 004443 188 SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (753)
Q Consensus 188 ~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~~ 227 (753)
..+..|.|.- +|+|+.+|++..||..+|..|-..-..+.
T Consensus 113 ~~~~gF~ltl-~K~Y~W~a~s~~Er~~FI~sL~K~y~ky~ 151 (171)
T 3hie_A 113 EISEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQTF 151 (171)
T ss_dssp SCTTEEEEES-SSEEEEECSSHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCcEEEEe-CCeEEEecCCHHHHHHHHHHHHHHHHHHc
Confidence 3577888776 69999999999999999999987766553
No 109
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=39.08 E-value=26 Score=26.01 Aligned_cols=32 Identities=25% Similarity=0.220 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 004443 277 QSQLLLLKQKQWLLIDTLRQLETEKVDLENTV 308 (753)
Q Consensus 277 ~~ql~~l~~~~~~L~dtl~qLE~ek~~le~t~ 308 (753)
+++|+.|.......+|..|.||.++..||.-+
T Consensus 5 Ke~mq~LNdrlAsyidkVR~LE~~N~~Le~~i 36 (39)
T 1gk7_A 5 KVELQELNDRFANYIDKVRFLEQQNKILLAEL 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999998887776543
No 110
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=30.72 E-value=1.7e+02 Score=26.90 Aligned_cols=53 Identities=21% Similarity=0.327 Sum_probs=40.3
Q ss_pred cEEEcCc-eEEEecCCCCCcEEEEe------CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 174 GEVHLKV-SSIRDSKSDDKRFSIFT------GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 174 G~I~L~~-ssi~~~~~d~~rF~I~t------~tkt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
-++|+.. ..++.++..++.|.|+- ..|+|.|-|.|+++..+=|..|+..++.+
T Consensus 57 tS~H~s~Vv~~K~s~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 57 KSLHISQVVLVKKSKRVPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSAY 116 (121)
T ss_dssp EEEEGGGEEEEEECSSCTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeEEEEEecccCCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 3556542 23556666688888654 25999999999999999999999988765
No 111
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=30.50 E-value=1.8e+02 Score=27.05 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=14.9
Q ss_pred CCcEEEEeCCeEEEEEcCC
Q 004443 190 DKRFSIFTGTKRLHLRAET 208 (753)
Q Consensus 190 ~~rF~I~t~tkt~~LrAeS 208 (753)
..++.|.-.++.|.|.++.
T Consensus 7 k~~V~V~I~Gk~Y~i~g~e 25 (138)
T 3hnw_A 7 KNTAEVILGGKVIKLGGYE 25 (138)
T ss_dssp --CEEEEETTEEEEECSCS
T ss_pred CCeeEEEECCEEEEecCCC
Confidence 4678888899999999874
No 112
>3sbu_A Hypothetical NTF2-like protein; cystatin-like, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; HET: MLY; 2.15A {Bacteroides fragilis}
Probab=27.95 E-value=42 Score=34.51 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=31.8
Q ss_pred ccceeeeeeccccee-eeeeeeE-EEEc-CCcceEEEEEeecc
Q 004443 588 KVTSSIYNLILGKLY-CDHYGTM-RIEG-NREYSCKLKFKEQS 627 (753)
Q Consensus 588 ~ptt~i~nii~G~~~-~e~~G~~-~I~~-~tg~~~~i~F~~k~ 627 (753)
.|.-.|+||+.|+.| .+-..++ .|+| .+|+..++.|+..+
T Consensus 206 lP~~~i~NI~YGQky~~~s~~KIl~~rGi~NG~e~~l~Fkk~~ 248 (261)
T 3sbu_A 206 LPADXLSNINYGQQNDDNASHKILALXGIGNGFSNILYFQRXD 248 (261)
T ss_dssp CCSSEEEEEESSCCCCTTCSEEEEEEEESSSCCEEEEEEEEET
T ss_pred cCcccceeeeccccccCCCCceEEEEEeecCceeEEEEEeecC
Confidence 588899999999999 4554444 5667 68999999998753
No 113
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=25.99 E-value=2.4e+02 Score=29.78 Aligned_cols=38 Identities=11% Similarity=0.176 Sum_probs=31.6
Q ss_pred CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 004443 188 SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (753)
Q Consensus 188 ~d~~rF~I~t~tkt~~LrAeS~edr~~WI~AL~~a~~~~ 226 (753)
..+..|.|.- +|.|+.+|++..||..+|..|-..-..+
T Consensus 183 ~~~~gF~LTl-~K~YyW~A~s~kER~~FI~sLvKiy~KY 220 (320)
T 3a58_A 183 EISEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQT 220 (320)
T ss_dssp SCTTEEEEES-SSEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEe-CCceEEecCCHHHHHHHHHHHHHHHHHH
Confidence 3457787766 9999999999999999999998776554
Done!