Query 004448
Match_columns 753
No_of_seqs 130 out of 814
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 01:31:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004448.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004448hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jqo_A Phosphoenolpyruvate car 100.0 3E-197 1E-201 1733.2 75.2 743 5-748 9-754 (970)
2 1jqn_A Pepcase, PEPC, phosphoe 100.0 4E-188 1E-192 1648.7 72.8 688 27-747 5-693 (883)
3 3odm_A Pepcase, PEPC, phosphoe 100.0 3.6E-60 1.2E-64 527.0 14.0 211 519-745 136-366 (560)
4 1e0t_A Pyruvate kinase, PK; ph 93.9 0.13 4.4E-06 57.9 8.8 90 523-631 186-276 (470)
5 1sgj_A Citrate lyase, beta sub 93.3 0.11 3.8E-06 54.4 6.6 95 522-629 93-189 (284)
6 1a3w_A Pyruvate kinase; allost 92.9 0.096 3.3E-06 59.3 5.7 90 523-631 207-296 (500)
7 3gr4_A Pyruvate kinase isozyme 92.2 0.23 7.8E-06 56.7 7.6 88 525-631 258-345 (550)
8 3qtg_A Pyruvate kinase, PK; TI 92.0 0.23 8E-06 55.5 7.3 105 523-646 197-301 (461)
9 3hqn_D Pyruvate kinase, PK; TI 91.2 0.24 8.3E-06 56.0 6.4 105 523-646 206-310 (499)
10 3qz6_A HPCH/HPAI aldolase; str 90.8 0.19 6.3E-06 52.3 4.6 98 524-632 90-214 (261)
11 3khd_A Pyruvate kinase; malari 90.6 0.32 1.1E-05 55.1 6.8 89 524-631 232-320 (520)
12 3qqw_A Putative citrate lyase; 90.3 0.54 1.9E-05 50.5 8.0 100 523-635 112-226 (332)
13 3gg8_A Pyruvate kinase; malari 90.3 0.32 1.1E-05 55.1 6.3 90 523-631 222-311 (511)
14 3r4i_A Citrate lyase; TIM beta 89.7 0.77 2.7E-05 49.4 8.6 104 523-639 111-229 (339)
15 3qll_A Citrate lyase; beta bar 89.6 0.23 7.9E-06 53.0 4.3 98 523-634 130-227 (316)
16 1dxe_A 2-dehydro-3-deoxy-galac 89.0 0.16 5.5E-06 52.4 2.5 97 525-632 94-216 (256)
17 3t05_A Pyruvate kinase, PK; te 88.3 0.56 1.9E-05 54.2 6.5 88 525-631 209-296 (606)
18 1izc_A Macrophomate synthase i 87.9 0.24 8.1E-06 53.5 3.0 93 525-629 120-250 (339)
19 2e28_A Pyruvate kinase, PK; al 87.1 0.86 2.9E-05 52.6 7.1 91 523-631 187-277 (587)
20 2vws_A YFAU, 2-keto-3-deoxy su 84.2 0.76 2.6E-05 47.7 4.5 97 525-632 93-216 (267)
21 2v5j_A 2,4-dihydroxyhept-2-ENE 83.2 0.78 2.7E-05 48.2 4.1 97 525-632 114-237 (287)
22 1u5h_A CITE; TIM barrel, struc 81.5 0.85 2.9E-05 47.5 3.5 86 523-629 85-177 (273)
23 3oyz_A Malate synthase; TIM ba 76.0 4.9 0.00017 44.5 7.6 121 503-629 92-227 (433)
24 4drs_A Pyruvate kinase; glycol 52.5 28 0.00097 39.5 8.0 107 523-646 230-341 (526)
25 4eys_A MCCC family protein; MC 36.5 16 0.00054 39.2 2.6 41 575-636 93-133 (346)
26 2d9e_A Peregrin; four-helix bu 27.5 1.4E+02 0.0047 26.8 6.9 23 399-421 61-83 (121)
27 2xz9_A Phosphoenolpyruvate-pro 26.5 60 0.002 34.4 5.0 147 525-695 138-306 (324)
28 1fa2_A Beta-amylase; TIM barre 23.3 47 0.0016 37.3 3.4 49 587-641 47-102 (498)
29 1wdp_A Beta-amylase; (beta/alp 23.1 48 0.0016 37.2 3.5 49 587-641 46-101 (495)
30 3cuz_A MSA, malate synthase A; 22.3 1.4E+02 0.0048 33.9 7.1 95 524-629 208-325 (532)
31 2ols_A Phosphoenolpyruvate syn 22.1 78 0.0027 37.7 5.3 100 525-631 643-751 (794)
32 3cux_A Malate synthase; TIM ba 21.3 1.9E+02 0.0066 32.8 8.0 95 525-629 206-322 (528)
33 2xfr_A Beta-amylase; hydrolase 21.0 56 0.0019 36.9 3.5 49 587-641 44-99 (535)
No 1
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=100.00 E-value=3.4e-197 Score=1733.23 Aligned_cols=743 Identities=80% Similarity=1.234 Sum_probs=657.5
Q ss_pred hhhhhhhhHHHHhhhCCCCCCCChhHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHhHhhhcCCCchhHHHHHHHhc
Q 004448 5 NLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLT 84 (753)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~lL~evl~e~~G~~~~~~ve~ir~ls~~~~~~~~~~~~~~L~~~l~ 84 (753)
..++|+++|+++|+++|++++++..|++|+++||++||+||++++|+++|++||++|.+|+++++..++...++|.+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~Lr~dv~lLg~lLg~vl~~~~g~~~~~~ve~ir~ls~~~~r~~~~~~~~~l~~~l~ 88 (970)
T 1jqo_A 9 PGEKHHSIDAQLRQLVPGKVSEDDKLIEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLT 88 (970)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHH
T ss_pred hHHHHHhhhHHhhcccCCCCCccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHh
Confidence 46889999999999999999999999999999999999999999999999999999999998843334567889999999
Q ss_pred CCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCCCCCCCCCCcchHHHHHHHH-HHHcCCCHHHHHHHhcc
Q 004448 85 SLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIKLKK-GDFVDENSATTESDIEETLKRL-VVQLKKSPEEVFDALKN 162 (753)
Q Consensus 85 ~L~~~~~~~vaRAFs~~f~L~NiAEe~~r~r~~r~~~~~-~~~~~~~~~~~~~s~~~~l~~L-~~~~g~~~e~i~~~L~~ 162 (753)
+|+++++..|+||||+||+|+|||||+|++|++|.+... +..++....+.+|||..++.+| + +.|+++++|++.|++
T Consensus 89 ~L~~~~~~~v~RAFs~~~~L~NiAEe~~~~r~~r~~~~~~~~~~~~~~~~~~~sl~~~~~~L~~-~~g~~~~~i~~~L~~ 167 (970)
T 1jqo_A 89 GLAPADAILVASSILHMLNLANLAEEVQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVS-EVGKSPEEVFEALKN 167 (970)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------CHHHHHHHHHT-TSCCCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchHHHHHHHHHH-HcCCCHHHHHHHHhc
Confidence 999999999999999999999999999999987754322 3221111223569999999999 8 899999999999999
Q ss_pred CceeEeeccCCCccchhhHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHhhcccccccCCCChHHHHHHHHHH
Q 004448 163 QTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSY 242 (753)
Q Consensus 163 ~~i~pVlTAHPTEa~Rrtvl~~~~~I~~~L~~~~~~~~t~~e~~~~~~~L~~~i~~LW~T~~ir~~KPtv~DE~~~~l~y 242 (753)
+.|+|||||||||++|||||+||++|+++|.++++.++++.|+++++++|+++|++||||+++|+.||||.||++||++|
T Consensus 168 ~~v~pVlTAHPTE~~RrTvl~k~~~I~~lL~~l~~~~lt~~e~~~~~~~L~~~I~~lW~TdeiR~~kPtv~DE~~~gl~y 247 (970)
T 1jqo_A 168 QTVDLVFTAHPTQSARRSLLQKNARIRNCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGMSY 247 (970)
T ss_dssp CEEEEEEECCTTCCSCHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHSCCSCCSCCCHHHHHHHHHHH
T ss_pred CceeeeeccCCccccHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhCChhhhccCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccccCCCCCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004448 243 FHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLM 322 (753)
Q Consensus 243 ~~~~l~~avP~l~~~l~~al~~~~~~~~~~~~~~~i~fgSWiGGDRDGNP~VT~~vT~~~~~~~r~~~l~~y~~~l~~L~ 322 (753)
|+++||++||.+|++++++|.++|.+..+|...|+|+|||||||||||||||||+||++|+.++|++++++|++++++|.
T Consensus 248 ~~~sl~~avP~~~r~l~~al~~~~~~~~l~~~~~~i~fGSWiGGDRDGNP~VTaevT~~~~~~~r~~al~~Y~~~l~~L~ 327 (970)
T 1jqo_A 248 IHETVWKGVPKFLRRVDTALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELM 327 (970)
T ss_dssp HTTTTTTTHHHHHHHHHHHHHTTTCCSCCCTTCCSEEEEECTTTBCTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887554555655566999999999999999999999999999999999999999999999
Q ss_pred hHhcCccCCHHHHHhHhhhhhcchhhh-hhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCC
Q 004448 323 FELSMWRCNDELRARADGLHRSSKRDA-KHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYT 401 (753)
Q Consensus 323 ~~LS~~~~s~~l~~~~~~~~~~~~~~~-~~~~~f~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~Y~ 401 (753)
++||+++||++|++.++...+.+++.. ++|..++..++++||||++|..|+.||.+|+..+...+.+.....+....|.
T Consensus 328 ~eLS~s~~s~eL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EPYR~~L~~i~~rL~~T~~~~~~~l~~~~~~~~~~~~Y~ 407 (970)
T 1jqo_A 328 FELSMWRCNDELRVRAEELHSSSGSKVTKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFT 407 (970)
T ss_dssp HHCCCCCCCHHHHHHHHHHHHHHCCCCCTTCSSSCSCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCSTTSCC
T ss_pred HHcCCCCCCHHHHHHHHHHHhhcccchhcccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcccCCC
Confidence 999999999999987665433333221 3444455667889999999999999999999877655544322112224799
Q ss_pred CHHHhhHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHhCCccccccccccchHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 004448 402 HVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQ 481 (753)
Q Consensus 402 ~~~ell~dL~~i~~sL~~~~~~~~a~~~L~~lir~v~~FGfhla~LDIRQ~S~~H~~av~el~~~~g~~~Y~~l~E~~r~ 481 (753)
+++||++||++|++||.+||+..+|+|.|.++||+|++|||||++|||||||++|++|++||++++|+++|.+|||++|+
T Consensus 408 ~~~ell~dL~~i~~SL~~~g~~~iA~g~L~~lir~V~~FGfhLa~LDiRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r~ 487 (970)
T 1jqo_A 408 SIEEFLEPLELCYKSLCDCGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDKRQ 487 (970)
T ss_dssp SHHHHHHHHHHHHHHHHHTSCCTTTTTHHHHHHHHHHHHTTSSSEEEEECCHHHHHHHHHHHHHHHTSCCSTTSCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCChhhhhhhHHHHHHHHHHhCeeccccchhhcchHHHHHHHHHHHHcCCCCcccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCccCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCC
Q 004448 482 EWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEK 561 (753)
Q Consensus 482 ~~L~~eL~~~rpl~~~~~~~s~~~~~~l~~f~~i~~~~~~a~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFET 561 (753)
+||.+||.++||+.++..++|++++++|++|++++++++++||+||||||+++||||+|++|+|++|+.++|+|||||||
T Consensus 488 ~~L~~eL~~~rpL~~~~~~~s~~~~evL~~f~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFET 567 (970)
T 1jqo_A 488 EWLLSELRGKRPLLPPDLPQTDEIADVIGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFER 567 (970)
T ss_dssp HHHHHHHHCCSCCCCTTCCCCHHHHHHHHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECS
T ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcchhHHhHhHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCC
Q 004448 562 LADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGR 641 (753)
Q Consensus 562 i~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~fFHGRGGsvgR 641 (753)
++||+|||.||++||++|+||+|++++|||||||||||||||+++|+|+||+||++|+++|+++||+++|||||||||||
T Consensus 568 i~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgR 647 (970)
T 1jqo_A 568 LADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGR 647 (970)
T ss_dssp HHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGG
T ss_pred HHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhhhcCCCCcccCceeeecccchhhhhcCChhHHHHHHHHHHHHHHHccCCCCCCCChHHHHHHHHHHHHHHHH
Q 004448 642 GGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKE 721 (753)
Q Consensus 642 GGGP~~~ailaqP~gsv~g~iR~TeQGEvI~~kYg~~~~A~r~LE~~~~a~l~~s~~~~~~~~~~~~~~me~ls~~s~~~ 721 (753)
||||+|+||+|||+||++|.||+|||||||++|||+|++|.+|||++++|++++++.++..++++|+++|++||+.|+++
T Consensus 648 GGgp~~~ailaqP~gsv~G~ir~TeQGEvI~~kYg~p~~a~~nLe~~~aA~l~a~l~~~~~~~~~~~~~m~~la~~s~~~ 727 (970)
T 1jqo_A 648 GGGPTHLAILSQPPDTINGSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVATEE 727 (970)
T ss_dssp TCCCHHHHHHTSCTTSCTTEEEEEEEHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHcCCCcccCCceEEEeecHHHHHhcCChHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998765567789999999999999999
Q ss_pred HHhhhhcCCChhhhhhhcccccccchh
Q 004448 722 YRSIVFQEPRFVEYFRLVSISPIHHHF 748 (753)
Q Consensus 722 Yr~Lv~~~p~F~~yF~~aTPi~~~~~~ 748 (753)
||++|+++|+|++||+++||+.|+...
T Consensus 728 Yr~lv~~~p~Fv~yF~~aTP~~ei~~L 754 (970)
T 1jqo_A 728 YRSVVVKEARFVEYFRSATPETEYGRM 754 (970)
T ss_dssp HHHHHTTCTTHHHHHHHHSCCGGGGGG
T ss_pred HHHHHhcCCCHHHHHHHhChHHHHHhC
Confidence 999999999999999999999998763
No 2
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=100.00 E-value=4.4e-188 Score=1648.68 Aligned_cols=688 Identities=40% Similarity=0.668 Sum_probs=649.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHhHhhhcCCCchhHHHHHHHhcCCCcccHHHHHHHHHHHHHHHh
Q 004448 27 DDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLAN 106 (753)
Q Consensus 27 ~~~l~~~~~~L~~lL~evl~e~~G~~~~~~ve~ir~ls~~~~~~~~~~~~~~L~~~l~~L~~~~~~~vaRAFs~~f~L~N 106 (753)
+..|++|+++||++||+||++++|+++|++||++|.+|++++.+ ++...++|.+.+++|+++++..|+||||+||+|+|
T Consensus 5 ~~~l~~dv~lLg~lLg~vl~~~~g~~~~~~ve~ir~l~~~~r~~-~~~~~~~l~~~l~~l~~~~~~~v~rAFs~~~~L~N 83 (883)
T 1jqn_A 5 YSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKSSRAG-NDANRQELLTTLQNLSNDELLPVARAFSQFLNLAN 83 (883)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcc-CchhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999998755 45677899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCcchHHHHHHHHHHHc-CCCHHHHHHHhccCceeEeeccCCCccchhhHHHHH
Q 004448 107 LAEEVQIAYRRRIKLKKGDFVDENSATTESDIEETLKRLVVQL-KKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKH 185 (753)
Q Consensus 107 iAEe~~r~r~~r~~~~~~~~~~~~~~~~~~s~~~~l~~L~~~~-g~~~e~i~~~L~~~~i~pVlTAHPTEa~Rrtvl~~~ 185 (753)
||||+|++|++|.+ + +.+|||+.++.+|+ +. |++++++++.|+++.|+|||||||||++|||||+|+
T Consensus 84 iAE~~~~~r~~~~~---~--------~~~~sl~~~~~~l~-~~~g~~~~~i~~~L~~~~i~pVlTAHPTE~~Rrtvl~~~ 151 (883)
T 1jqn_A 84 TAEQYHSISPKGEA---A--------SNPEVIARTLRKLK-NQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKM 151 (883)
T ss_dssp HHHHHHHHCTTTTC---T--------TCTHHHHHHHHHHH-TCTTCCHHHHHHHHHTCCEEEEECCCTTCCBSSCCHHHH
T ss_pred HHHHHHHHHHHhhc---C--------CCCccHHHHHHHHH-HhcCCCHHHHHHHHhcCeeeeeeccCCccchHHHHHHHH
Confidence 99999999875532 1 23589999999998 88 999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHhhcccccccCCCChHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhc
Q 004448 186 GRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNI 265 (753)
Q Consensus 186 ~~I~~~L~~~~~~~~t~~e~~~~~~~L~~~i~~LW~T~~ir~~KPtv~DE~~~~l~y~~~~l~~avP~l~~~l~~al~~~ 265 (753)
++|+++|.++++..+++.|+++++++|+++|++||||+++|..||||.||++||++||+++||++||.+|++++++|.+.
T Consensus 152 ~~I~~lL~~~~~~~l~~~e~~~~~~~L~~~I~~lW~T~eiR~~kPtv~DE~~~gl~y~~~sl~~avP~~~~~l~~~l~~~ 231 (883)
T 1jqn_A 152 VEVNACLKQLDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEEN 231 (883)
T ss_dssp HHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHHHHCCCBCSSCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhCcchhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCcccccccCCCCCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCccCCHHHHHhHhhhhhcc
Q 004448 266 GINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSS 345 (753)
Q Consensus 266 ~~~~~~~~~~~~i~fgSWiGGDRDGNP~VT~~vT~~~~~~~r~~~l~~y~~~l~~L~~~LS~~~~s~~l~~~~~~~~~~~ 345 (753)
+++ .+|..++||+|||||||||||||||||+||++|+.++|++++++|++++++|.++||+++||+++.+.++.
T Consensus 232 ~~~-~~~~~~~~i~fgSWiGGDRDGNP~VTa~vT~~~~~~~r~~al~~y~~~l~~L~~~LS~~~~s~~l~~~~~~----- 305 (883)
T 1jqn_A 232 LGY-KLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKATDLFLKDIQVLVSELSMVEATPELLALVGE----- 305 (883)
T ss_dssp TSC-CCCTTCCCEEEEECTTTBCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCT-----
T ss_pred cCC-CCCCCCCccccCCcCccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHhh-----
Confidence 543 44545677999999999999999999999999999999999999999999999999999999999875553
Q ss_pred hhhhhhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCHHHhhHHHHHHHHHHHhcCCccc
Q 004448 346 KRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPI 425 (753)
Q Consensus 346 ~~~~~~~~~f~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~Y~~~~ell~dL~~i~~sL~~~~~~~~ 425 (753)
.+++||||++|..|+.||.+|+..+...+.+.. ..+.+..|.+++||++||.+|++||.+||+..+
T Consensus 306 -------------~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~-~~~~~~~y~~~~ell~dL~~i~~SL~~~g~~~i 371 (883)
T 1jqn_A 306 -------------EGAAEPYRYLMKNLRSRLMATQAWLEARLKGEE-LPKPEGLLTQNEELWEPLYACYQSLQACGMGII 371 (883)
T ss_dssp -------------TSSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCCCSSCCCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred -------------hcCCCcHHHHHHHHHHHHHHHHHHHHhhhccCC-CCCcccCCCCHHHHHHHHHHHHHHHHHCCChhh
Confidence 157999999999999999999987665443321 011123599999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhCCccccccccccchHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCCCCCCHHH
Q 004448 426 ADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEI 505 (753)
Q Consensus 426 a~~~L~~lir~v~~FGfhla~LDIRQ~S~~H~~av~el~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpl~~~~~~~s~~~ 505 (753)
|+|.|.++|++|++|||||++|||||||++|++|++||++++|+++|.+|||++|++||.+||.++||+.++..++|+++
T Consensus 372 a~~~L~~lir~v~~FGfhLa~LDiRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpl~~~~~~~s~~~ 451 (883)
T 1jqn_A 372 ANGDLLDTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAET 451 (883)
T ss_dssp HTTHHHHHHHHHHHTTTTSSEEEEEEEHHHHHHHHHHHHHHHTSCCGGGSCHHHHHHHHHHHHHCSSCCSCSSCCCCHHH
T ss_pred HHhHHHHHHHHHHhhCcccCCccccccchHHHHHHHHHHHHcCCCCcccCCHHHHHHHHHHHhcCCCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhh
Q 004448 506 ADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRI 585 (753)
Q Consensus 506 ~~~l~~f~~i~~~~~~a~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l 585 (753)
+++|++|++++++++++||+||||||+++||||+|++|+|++|+..+++|||||||++||+|||.||++||++|+||+|+
T Consensus 452 ~~~L~~f~~i~~~~~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l 531 (883)
T 1jqn_A 452 REVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI 531 (883)
T ss_dssp HHHHHHHHHHHHSCTTSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHT
T ss_pred HHHHHHHHHHHHhhhhhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhh
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred cCceEEEEeecCCCcchhHHhHhHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCcchhhhhhcCCCCcccCceeee
Q 004448 586 SGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVT 665 (753)
Q Consensus 586 ~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~fFHGRGGsvgRGGGP~~~ailaqP~gsv~g~iR~T 665 (753)
+++|||||||||||||||+++|+|+||+||++|+++|+++||+++|||||||||||||||+|+||+||||||++|++|+|
T Consensus 532 ~~~qeVMlGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGRGGsvgRGGgp~~~ailaqp~gsv~g~~r~T 611 (883)
T 1jqn_A 532 QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVT 611 (883)
T ss_dssp TTEEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECSSTGGGSCHHHHHHHHHTSCTTTTTTCEEEE
T ss_pred CCeEEEEEeeccccccccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCchHHHHHhCCCCCcCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhcCChhHHHHHHHHHHHHHHHccCCCCCCCChHHHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhccccccc
Q 004448 666 VQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLVSISPIH 745 (753)
Q Consensus 666 eQGEvI~~kYg~~~~A~r~LE~~~~a~l~~s~~~~~~~~~~~~~~me~ls~~s~~~Yr~Lv~~~p~F~~yF~~aTPi~~~ 745 (753)
||||||++|||+|.+|.+|||++++|++++++.++..++++|+++|++||+.|+++||+||+++|+|++||.++||+.|+
T Consensus 612 eQGEvI~~kY~~p~~a~~nLe~~~~A~l~~~~~~~~~~~~~~~~~m~~la~~s~~~Yr~lv~~~p~fv~yf~~~tP~~ei 691 (883)
T 1jqn_A 612 EQGEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYFRSATPEQEL 691 (883)
T ss_dssp ECGGGHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHSCHHHH
T ss_pred ecchHHHHhcCChHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhChHHHH
Confidence 99999999999999999999999999999998766567889999999999999999999999999999999999999988
Q ss_pred ch
Q 004448 746 HH 747 (753)
Q Consensus 746 ~~ 747 (753)
..
T Consensus 692 ~~ 693 (883)
T 1jqn_A 692 GK 693 (883)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 3
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=100.00 E-value=3.6e-60 Score=527.01 Aligned_cols=211 Identities=17% Similarity=0.189 Sum_probs=194.2
Q ss_pred CCCccCcEEecCCCCcccHHHHHHHHHH-cC-------C---CCCCccccccCChHHHhchHHHHHHHhccHHHHHhh--
Q 004448 519 PADSFGAYIISMATAPSDVLAVELLQRE-CR-------V---KQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRI-- 585 (753)
Q Consensus 519 ~~~a~g~yIISmt~s~sDvL~Vl~L~k~-~g-------l---~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l-- 585 (753)
+.++|+.||||||+|+||||+|++|+|+ +| . .++|+|||||||++||.||++||++||++ ||+ +
T Consensus 136 g~~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~--~r~-l~~ 212 (560)
T 3odm_A 136 GTPAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEI--EKS-KGH 212 (560)
T ss_dssp SSCSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHH--HHH-TTC
T ss_pred CCcccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHH--HHH-hcc
Confidence 4689999999999999999999999965 33 3 36899999999999999999999999997 887 6
Q ss_pred -cCceEEEEeecCCCcchhHHhHhHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCcchhh--hhhcCCCCcccCce
Q 004448 586 -SGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHL--AILSQPPDTIHGSL 662 (753)
Q Consensus 586 -~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~fFHGRGGsvgRGGGP~~~--ailaqP~gsv~g~i 662 (753)
++.|||||||||||||||+++|+|+||+||++|+++|+++||+++|||||||||||||||++. +|++||||+ +
T Consensus 213 ~~~~QeVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lFHGRGGtvgRGGgp~~~a~aiLaQppG~----~ 288 (560)
T 3odm_A 213 ILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGCGSLPFRGHFSEENIDEILATYSGI----K 288 (560)
T ss_dssp CCSEEEEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEECCSSGGGTCCCTTCHHHHHHHTTTC----C
T ss_pred cCCeEEEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeeCCCCCcCCCCCHHHHHHHHhCCCCC----c
Confidence 368999999999999999999999999999999999999999999999999999999999985 599999999 7
Q ss_pred eeecccchhhhhcCChhHHHHHHHHHHHHHHHccCCCCCC-C---ChHHHHHHHHHHHHHHHHHHhhhhcCCChhhhhhh
Q 004448 663 RVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVS-P---KPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRL 738 (753)
Q Consensus 663 R~TeQGEvI~~kYg~~~~A~r~LE~~~~a~l~~s~~~~~~-~---~~~~~~~me~ls~~s~~~Yr~Lv~~~p~F~~yF~~ 738 (753)
++|||| +.||+.|. +.+.+|+.+++..++.. | +.+|+++|+.+++.|+++||++|.+.++|+.||.+
T Consensus 289 tvTeQg---a~KYd~p~------~~y~~AI~~a~~~~p~~~P~~~~~e~~e~m~~la~~s~~~YR~~V~~~ad~I~~~a~ 359 (560)
T 3odm_A 289 TFTFQS---ALRYDHGE------EATKHAVRELKEKIAQSKPRNFSEEDKDLMKEFIGICSKHYLQTFLKVIDTVSFVSD 359 (560)
T ss_dssp EEEECH---HHHHTTCH------HHHHHHHHHHHHHGGGCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEeeec---hhhcCCCH------HHHHHHHHHHHhCCCCcCccccchHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 799999 99999999 88999999888754433 4 35899999999999999999999999999999999
Q ss_pred ccccccc
Q 004448 739 VSISPIH 745 (753)
Q Consensus 739 aTPi~~~ 745 (753)
+||..+-
T Consensus 360 ~tP~rR~ 366 (560)
T 3odm_A 360 FIPKNRD 366 (560)
T ss_dssp TSCCCSC
T ss_pred hCChhhh
Confidence 9999873
No 4
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=93.89 E-value=0.13 Score=57.85 Aligned_cols=90 Identities=12% Similarity=0.121 Sum_probs=78.8
Q ss_pred cCcEEecCCCCcccHHHHHHHHHHc-CCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcc
Q 004448 523 FGAYIISMATAPSDVLAVELLQREC-RVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKD 601 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~~-gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KD 601 (753)
+-..++|+.++++|+.++--+.++. |- .+.|++..||.+.++|.++|++. + =-||+|=.|=+.+
T Consensus 186 vD~I~lsfV~saeDv~~~~~~l~~~~~~--~i~IiakIEt~eav~nldeI~~~--s-----------DgImVargDLgve 250 (470)
T 1e0t_A 186 VDFVAASFIRKRSDVIEIREHLKAHGGE--NIHIISKIENQEGLNNFDEILEA--S-----------DGIMVARGDLGVE 250 (470)
T ss_dssp CSEEEESSCCSHHHHHHHHHHHHTTTCT--TCEEEEEECSHHHHHTHHHHHHH--S-----------SEEEEEHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHhcCC--CceEEEEECCHHHHHhHHHHHHH--C-----------CEEEECchHhhhh
Confidence 3356899999999999999999887 63 68899999999999999999986 1 1799999998888
Q ss_pred hhHHhHhHHHHHHHHHHHHHHHHhCCeEEE
Q 004448 602 AGRLSAAWQLYKTQEELVKVAKQYGVKLTM 631 (753)
Q Consensus 602 gG~laa~W~Ly~Aq~~L~~v~~~~gV~l~f 631 (753)
-|. ..+..+|+++...|+++|+.+..
T Consensus 251 ig~----e~v~~~qk~ii~~araaGkpvI~ 276 (470)
T 1e0t_A 251 IPV----EEVIFAQKMMIEKCIRARKVVIT 276 (470)
T ss_dssp SCH----HHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCH----HHHHHHHHHHHHHHHHcCCCEEE
Confidence 885 66999999999999999998765
No 5
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=93.26 E-value=0.11 Score=54.36 Aligned_cols=95 Identities=15% Similarity=0.177 Sum_probs=76.0
Q ss_pred ccCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcc
Q 004448 522 SFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKD 601 (753)
Q Consensus 522 a~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KD 601 (753)
.+...+++|++++.|+-.+.-++++.| ..+.|+|+.||...+.|+++|.. ..+..-+|+|-.|=+.+
T Consensus 93 g~~~i~lPkv~s~~~v~~~~~~l~~~g--~~~~i~~~IEt~~av~~~~eIa~-----------~~~vd~l~iG~~DL~~~ 159 (284)
T 1sgj_A 93 ELSGVVVPKLEMGAEARQVAQMLQERS--LPLPILAGLETGAGVWNAREIME-----------VPEVAWAYFGAEDYTTD 159 (284)
T ss_dssp TSSEEEECSCCSHHHHHHHHHHHHHTT--CCCCEEEEECSHHHHHTHHHHHT-----------STTEEEEEECHHHHHHH
T ss_pred cCCEEEeCCCCCHHHHHHHHHHHHhcC--CCeEEEEEecCHHHHHHHHHHHc-----------CCCCcEEEECHHHHHHH
Confidence 355689999999999999999988876 47889999999999999988872 23567788887776666
Q ss_pred hhHH--hHhHHHHHHHHHHHHHHHHhCCeE
Q 004448 602 AGRL--SAAWQLYKTQEELVKVAKQYGVKL 629 (753)
Q Consensus 602 gG~l--aa~W~Ly~Aq~~L~~v~~~~gV~l 629 (753)
-|.- ...-.+..++.+++..|+++|+.+
T Consensus 160 lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~ 189 (284)
T 1sgj_A 160 LGGKRTPGGLEVLYARSQVALAARLTGVAA 189 (284)
T ss_dssp HTCCCCSSCGGGHHHHHHHHHHHHHHTCEE
T ss_pred hCCCCCCChHHHHHHHHHHHHHHHHcCCCe
Confidence 5531 112457889999999999999986
No 6
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=92.88 E-value=0.096 Score=59.33 Aligned_cols=90 Identities=14% Similarity=0.194 Sum_probs=78.7
Q ss_pred cCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcch
Q 004448 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (753)
+...++||.++++|+.++--+..+.| ..+.|++..||.+.++|.++|++. . --||+|-.|=+.+-
T Consensus 207 ~d~I~lpfV~saeDv~~~~~~l~~~~--~~i~IiakIEt~eav~nldeI~~~--~-----------DgImvgrgDLgvel 271 (500)
T 1a3w_A 207 VHMVFASFIRTANDVLTIREVLGEQG--KDVKIIVKIENQQGVNNFDEILKV--T-----------DGVMVARGDLGIEI 271 (500)
T ss_dssp CSEEEECSCCSHHHHHHHHHHHHHHH--TTSEEEEEECSSHHHHSHHHHHHH--S-----------SEEEECHHHHHHHT
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhcC--CCcEEEEEECChHHHHhHHHHHHh--C-----------CEEEECchHhhhhc
Confidence 34579999999999999988887776 478899999999999999999976 1 27999999998888
Q ss_pred hHHhHhHHHHHHHHHHHHHHHHhCCeEEE
Q 004448 603 GRLSAAWQLYKTQEELVKVAKQYGVKLTM 631 (753)
Q Consensus 603 G~laa~W~Ly~Aq~~L~~v~~~~gV~l~f 631 (753)
|. ..+..+|+++...|+++|+.+..
T Consensus 272 g~----~~v~~aqk~ii~aaraaGkpvi~ 296 (500)
T 1a3w_A 272 PA----PEVLAVQKKLIAKSNLAGKPVIC 296 (500)
T ss_dssp TG----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred Cc----HHHHHHHHHHHHHHHhcCCCEEE
Confidence 83 56889999999999999999874
No 7
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=92.19 E-value=0.23 Score=56.72 Aligned_cols=88 Identities=14% Similarity=0.197 Sum_probs=76.5
Q ss_pred cEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcchhH
Q 004448 525 AYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGR 604 (753)
Q Consensus 525 ~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~ 604 (753)
-..+|+.++++||.++--+.++.| ..+.|++-.||.+.++|.++|++. .=-||+|-.|=+-+-|.
T Consensus 258 ~ia~SfVr~a~Dv~~~r~~L~~~g--~~i~IIAKIE~~eav~nldeIl~~-------------sDgImVaRGDLgvei~~ 322 (550)
T 3gr4_A 258 MVFASFIRKASDVHEVRKVLGEKG--KNIKIISKIENHEGVRRFDEILEA-------------SDGIMVARGDLGIEIPA 322 (550)
T ss_dssp EEEETTCCSHHHHHHHHHHHTTTT--TTSEEEEEECSHHHHHTHHHHHHH-------------SSEEEEEHHHHHHHSCG
T ss_pred EEEecCCCCHHHHHHHHHHHHhcC--CCceEEEEeCCHHHHHHHHHHHHh-------------CCEEEEccchhcccCCH
Confidence 456899999999999999988877 478999999999999999999996 12699998887777665
Q ss_pred HhHhHHHHHHHHHHHHHHHHhCCeEEE
Q 004448 605 LSAAWQLYKTQEELVKVAKQYGVKLTM 631 (753)
Q Consensus 605 laa~W~Ly~Aq~~L~~v~~~~gV~l~f 631 (753)
..+..+|+++...|+++|..+..
T Consensus 323 ----e~vp~~Qk~iI~~c~~agkpVi~ 345 (550)
T 3gr4_A 323 ----EKVFLAQKMMIGRCNRAGKPVIC 345 (550)
T ss_dssp ----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred ----HHHHHHHHHHHHHHHHhCCCEEE
Confidence 56999999999999999988774
No 8
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=91.97 E-value=0.23 Score=55.48 Aligned_cols=105 Identities=21% Similarity=0.163 Sum_probs=84.9
Q ss_pred cCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcch
Q 004448 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (753)
+--..+|+.++++||.++--+.++.|. .+.|+.-.||.+.++|.++|++. .--||+|-.|=+-+-
T Consensus 197 vD~Ia~SfVr~a~Dv~~~r~~l~~~g~--~~~iiaKIE~~eav~nldeIl~~-------------sDgImVaRGDLgvei 261 (461)
T 3qtg_A 197 IDYVAISLAKSCKDVDSVRSLLTELGF--QSQVAVKIETKGAVNNLEELVQC-------------SDYVVVARGDLGLHY 261 (461)
T ss_dssp CCEEEECSCCSHHHHHHHHHHHHHTTC--CCEEEEEECSHHHHHTHHHHHHT-------------CSEEEEEHHHHTTTS
T ss_pred CCEEEecCCCCHHHHHHHHHHHHhcCC--CceEEEEECCHHHHHhHHHHHHh-------------cccEEEccccccccC
Confidence 445688999999999999999998884 58999999999999999999985 237999998888777
Q ss_pred hHHhHhHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCcch
Q 004448 603 GRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPT 646 (753)
Q Consensus 603 G~laa~W~Ly~Aq~~L~~v~~~~gV~l~fFHGRGGsvgRGGGP~ 646 (753)
|. ..+..+|+++...|+++|..+..==--=.|.-...=||
T Consensus 262 ~~----e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PT 301 (461)
T 3qtg_A 262 GL----DALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPT 301 (461)
T ss_dssp CT----TTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCC
T ss_pred CH----HHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCcc
Confidence 73 48999999999999999988876322223334444455
No 9
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=91.24 E-value=0.24 Score=55.97 Aligned_cols=105 Identities=11% Similarity=0.090 Sum_probs=83.4
Q ss_pred cCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcch
Q 004448 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (753)
+--..+|+.++++||.++--++++.| ..+.|++-.||.+.++|.++|++. .--||+|-.|=+-+-
T Consensus 206 vD~i~~sfVr~a~dv~~~r~~l~~~~--~~i~IiaKIE~~eav~nldeIl~~-------------sDgImVaRGDLgvEi 270 (499)
T 3hqn_D 206 VDMIFASFIRSAEQVGDVRKALGPKG--RDIMIICKIENHQGVQNIDSIIEE-------------SDGIMVARGDLGVEI 270 (499)
T ss_dssp CSEEEETTCCSHHHHHHHHHHHCGGG--TTSEEEEEECSHHHHHTHHHHHHH-------------SSEEEEEHHHHHHHS
T ss_pred CCEEEecCCCCHHHHHHHHHHHHhcC--CCCeEEEEECCHHHHHhHHHHHHh-------------CCcEEEccccccCcC
Confidence 34567899999999999998887766 478999999999999999999996 137999988876666
Q ss_pred hHHhHhHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCcch
Q 004448 603 GRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPT 646 (753)
Q Consensus 603 G~laa~W~Ly~Aq~~L~~v~~~~gV~l~fFHGRGGsvgRGGGP~ 646 (753)
|. ..+..+|+++...|+++|..+..-=--=.|.-.-.=||
T Consensus 271 ~~----e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PT 310 (499)
T 3hqn_D 271 PA----EKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPT 310 (499)
T ss_dssp CH----HHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCC
T ss_pred CH----HHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCcc
Confidence 63 58999999999999999988876322223333444455
No 10
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=90.76 E-value=0.19 Score=52.26 Aligned_cols=98 Identities=17% Similarity=0.298 Sum_probs=77.8
Q ss_pred CcEEecCCCCcccHHHHHHHHHHc---------------CC----------CCCCccccccCChHHHhchHHHHHHHhcc
Q 004448 524 GAYIISMATAPSDVLAVELLQREC---------------RV----------KQPLRVVPLFEKLADLEAAPASVARLFSI 578 (753)
Q Consensus 524 g~yIISmt~s~sDvL~Vl~L~k~~---------------gl----------~~~l~VvPLFETi~DL~~a~~im~~Ll~~ 578 (753)
...++.|++++.|+-.+.-.+|.. |. ...+.|+++.||...+.|+++|..
T Consensus 90 ~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~~eIaa----- 164 (261)
T 3qz6_A 90 EGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILA----- 164 (261)
T ss_dssp CEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTHHHHHT-----
T ss_pred CEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHHHHHhC-----
Confidence 457999999999999988877531 11 135789999999999999999984
Q ss_pred HHHHHhhcCceEEEEeecCCCcchhHHhH--hHHHHHHHHHHHHHHHHhCCeEEEe
Q 004448 579 DWYRNRISGKQEVMIGYSDSGKDAGRLSA--AWQLYKTQEELVKVAKQYGVKLTMF 632 (753)
Q Consensus 579 p~yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~v~~~~gV~l~fF 632 (753)
+.+.--+|+|-.|=+.+-|.... .=++..++++++..|+++|+.+-++
T Consensus 165 ------~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~ 214 (261)
T 3qz6_A 165 ------VQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFF 214 (261)
T ss_dssp ------STTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred ------CCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 23567799998887777765431 2368999999999999999999776
No 11
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=90.62 E-value=0.32 Score=55.13 Aligned_cols=89 Identities=15% Similarity=0.218 Sum_probs=77.5
Q ss_pred CcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcchh
Q 004448 524 GAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAG 603 (753)
Q Consensus 524 g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG 603 (753)
--..+|+.++++||.++--+.++.| ..+.|++-.||.+.++|.++|++.- --||+|--|=+-+-|
T Consensus 232 D~Ia~SFVr~a~Dv~~~r~~l~~~g--~~i~IIAKIE~~eav~nldeIl~~s-------------DGIMVARGDLgvEi~ 296 (520)
T 3khd_A 232 NFIAASFIQSADDVRLIRNLLGPRG--RHIKIIPKIENIEGIIHFDKILAES-------------DGIMIARGDLGMEIS 296 (520)
T ss_dssp CEEEETTCCSHHHHHHHHHHHTTTT--TTSEEEEEECSHHHHHTHHHHHHHS-------------SCEEECHHHHTTTSC
T ss_pred CEEEECCCCCHHHHHHHHHHHHhcC--CCCcEEEEECCHHHHHhHHHHHHhC-------------CcEEEccccccccCC
Confidence 3457899999999999999988877 4789999999999999999999861 269999888877776
Q ss_pred HHhHhHHHHHHHHHHHHHHHHhCCeEEE
Q 004448 604 RLSAAWQLYKTQEELVKVAKQYGVKLTM 631 (753)
Q Consensus 604 ~laa~W~Ly~Aq~~L~~v~~~~gV~l~f 631 (753)
. ..+..+|+++...|+++|..+..
T Consensus 297 ~----e~vp~~Qk~iI~~c~~aGKPVi~ 320 (520)
T 3khd_A 297 P----EKVFLAQKLMISKCNLQGKPIIT 320 (520)
T ss_dssp G----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred H----HHHHHHHHHHHHHHHHcCCCeEE
Confidence 5 49999999999999999988774
No 12
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=90.34 E-value=0.54 Score=50.46 Aligned_cols=100 Identities=16% Similarity=0.172 Sum_probs=76.5
Q ss_pred cCcEEecCCCCcccHHHHHHHHHH----cCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCC
Q 004448 523 FGAYIISMATAPSDVLAVELLQRE----CRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDS 598 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~----~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS 598 (753)
+...++-|++++.||-.+.-+.++ .|+..++.|+|+.||...+.|+.+|.. ..+..-+++|-.|=
T Consensus 112 ~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa-----------~~rv~~L~~G~~DL 180 (332)
T 3qqw_A 112 LAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAE-----------LPNIEVLDFGLMDF 180 (332)
T ss_dssp CCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTT-----------STTEEEEEECHHHH
T ss_pred CCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhc-----------CcCCCEEEEcHHHH
Confidence 446899999999999887666543 476667899999999999999999873 23567788888887
Q ss_pred CcchhHH--------hHhH---HHHHHHHHHHHHHHHhCCeEEEecCC
Q 004448 599 GKDAGRL--------SAAW---QLYKTQEELVKVAKQYGVKLTMFHGR 635 (753)
Q Consensus 599 ~KDgG~l--------aa~W---~Ly~Aq~~L~~v~~~~gV~l~fFHGR 635 (753)
.++-|.- ...| .+..|..+++..|+.+|+.. ++|=
T Consensus 181 ~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~--id~v 226 (332)
T 3qqw_A 181 VSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVP--AHNV 226 (332)
T ss_dssp HHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEE--EECC
T ss_pred HHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCc--ccCC
Confidence 6664431 1223 26788889999999999985 5653
No 13
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=90.26 E-value=0.32 Score=55.11 Aligned_cols=90 Identities=17% Similarity=0.222 Sum_probs=76.9
Q ss_pred cCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcch
Q 004448 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (753)
+--..+|+.++++||.++--+.++.| ..+.|+.-.||.+.++|.++|++.- --||+|-.|=+-+-
T Consensus 222 vD~Ia~SFVr~a~Dv~~~r~~l~~~~--~~~~iiaKIE~~eav~nldeIl~~s-------------DgimVaRGDLgvei 286 (511)
T 3gg8_A 222 CNFIAASFVQSADDVRYIRGLLGPRG--RHIRIIPKIENVEGLVNFDEILAEA-------------DGIMIARGDLGMEI 286 (511)
T ss_dssp CCEEEETTCCSHHHHHHHHHHHTGGG--TTCEEEEEECSHHHHHTHHHHHHHC-------------SCEEEEHHHHHHHS
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhcC--CCCeEEEEECCHHHHHhHHHHHHhC-------------CeEEEecchhcCcC
Confidence 44567899999999999999998887 3789999999999999999999861 36999988765555
Q ss_pred hHHhHhHHHHHHHHHHHHHHHHhCCeEEE
Q 004448 603 GRLSAAWQLYKTQEELVKVAKQYGVKLTM 631 (753)
Q Consensus 603 G~laa~W~Ly~Aq~~L~~v~~~~gV~l~f 631 (753)
| -..+..+|+++.+.|+++|..+..
T Consensus 287 ~----~e~v~~~qk~ii~~~~~~gkpvi~ 311 (511)
T 3gg8_A 287 P----PEKVFLAQKMMIAKCNVVGKPVIT 311 (511)
T ss_dssp C----HHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred C----HHHHHHHHHHHHHHHHHcCCCeEE
Confidence 5 369999999999999999988776
No 14
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=89.74 E-value=0.77 Score=49.42 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=78.2
Q ss_pred cCcEEecCCCCcccHHHHHHHHH----HcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCC
Q 004448 523 FGAYIISMATAPSDVLAVELLQR----ECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDS 598 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k----~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS 598 (753)
+-..++-|++++.||-.+.-+.+ ..|+..++.|+|+.||...+.|+.+|.. ..+..-+++|-.|=
T Consensus 111 ~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa-----------~~rv~~L~~G~~DL 179 (339)
T 3r4i_A 111 PAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAA-----------LPGVEALSFGLMDF 179 (339)
T ss_dssp CSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHT-----------CTTEEEEEECHHHH
T ss_pred CCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHc-----------CcCCCEEEECHHHH
Confidence 45689999999999988766654 3476667899999999999999999883 23567889998887
Q ss_pred CcchhH--------HhHhHH---HHHHHHHHHHHHHHhCCeEEEecCCCCCC
Q 004448 599 GKDAGR--------LSAAWQ---LYKTQEELVKVAKQYGVKLTMFHGRGGTV 639 (753)
Q Consensus 599 ~KDgG~--------laa~W~---Ly~Aq~~L~~v~~~~gV~l~fFHGRGGsv 639 (753)
.++-|. ....|. +..|...++..|+.+|+.+ ++|==+-+
T Consensus 180 ~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~--id~v~~d~ 229 (339)
T 3r4i_A 180 VSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVP--SHNVSTEV 229 (339)
T ss_dssp HHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEE--EECCCCCS
T ss_pred HHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCC--ccCCCcCC
Confidence 766543 123343 6788899999999999985 56544444
No 15
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=89.64 E-value=0.23 Score=53.05 Aligned_cols=98 Identities=15% Similarity=0.188 Sum_probs=77.2
Q ss_pred cCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcch
Q 004448 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (753)
+..+++-|++++.|+-.+.-+.+.++ ..+.|+|+.||...+.|+.+|.. ...+..-+++|-.|=..|-
T Consensus 130 ~~gIvlPKvesa~~v~~~~~~l~~~~--~~~~l~~~IET~~gv~~~~eIa~----------a~~~v~~l~~G~~DL~~~l 197 (316)
T 3qll_A 130 PDYLVLPKTESAAHLQILDRLMMFAG--SDTRLIGIIESVRGLNAVESIAA----------ATPKLAGLIFGAADMAADI 197 (316)
T ss_dssp CSEEEETTCCSHHHHHHHHHHTSCC----CCEEEEEECSHHHHHTHHHHHT----------SCTTEEEEEECHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHHHh----------cCCCceEEEECHHHHHHHh
Confidence 45789999999999988877765443 36889999999999999999975 1345778899988887777
Q ss_pred hHHhHhHHHHHHHHHHHHHHHHhCCeEEEecC
Q 004448 603 GRLSAAWQLYKTQEELVKVAKQYGVKLTMFHG 634 (753)
Q Consensus 603 G~laa~W~Ly~Aq~~L~~v~~~~gV~l~fFHG 634 (753)
|.-...=.+..+..+++..|+.+|+.+ ++|
T Consensus 198 G~~~~~~~l~~ar~~iv~AaraaGi~~--id~ 227 (316)
T 3qll_A 198 GAASTWEPLALARARLVSACAMNGIPA--IDA 227 (316)
T ss_dssp TCCSSHHHHHHHHHHHHHHHHHHTCCE--EEC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCce--eec
Confidence 765444456778889999999999986 554
No 16
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=89.05 E-value=0.16 Score=52.40 Aligned_cols=97 Identities=14% Similarity=0.211 Sum_probs=76.1
Q ss_pred cEEecCCCCcccHHHHHHHHHHc--CC----------------------CCCCccccccCChHHHhchHHHHHHHhccHH
Q 004448 525 AYIISMATAPSDVLAVELLQREC--RV----------------------KQPLRVVPLFEKLADLEAAPASVARLFSIDW 580 (753)
Q Consensus 525 ~yIISmt~s~sDvL~Vl~L~k~~--gl----------------------~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~ 580 (753)
..++.|.+++.|+-.+.-.++.. |. ...+.|+++.||.+.+.|+++|..
T Consensus 94 gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~------- 166 (256)
T 1dxe_A 94 NFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAA------- 166 (256)
T ss_dssp EEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHT-------
T ss_pred eeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhC-------
Confidence 47999999999998887776531 11 135789999999999999999984
Q ss_pred HHHhhcCceEEEEeecCCCcchhHHhH--hHHHHHHHHHHHHHHHHhCCeEEEe
Q 004448 581 YRNRISGKQEVMIGYSDSGKDAGRLSA--AWQLYKTQEELVKVAKQYGVKLTMF 632 (753)
Q Consensus 581 yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~v~~~~gV~l~fF 632 (753)
+.+.--+|+|-.|=+.+-|+... .=++..++.+++..|+++|+.+..|
T Consensus 167 ----~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~ 216 (256)
T 1dxe_A 167 ----TEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGIL 216 (256)
T ss_dssp ----STTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ----CCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEe
Confidence 23566799998887777775431 2258899999999999999998654
No 17
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=88.33 E-value=0.56 Score=54.24 Aligned_cols=88 Identities=18% Similarity=0.291 Sum_probs=76.5
Q ss_pred cEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcchhH
Q 004448 525 AYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGR 604 (753)
Q Consensus 525 ~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~ 604 (753)
-..+|+.++++||.++--+.++.|- .+.|+.-.||.+.++|.++|++. .--||+|-.|=+-+-|.
T Consensus 209 ~Ia~SFVr~a~Dv~~~r~~l~~~~~--~i~IiaKIE~~eav~nldeIl~~-------------sDGImVARGDLgvei~~ 273 (606)
T 3t05_A 209 FIAASFVRRPSDVLEIREILEEQKA--NISVFPKIENQEGIDNIEEILEV-------------SDGLMVARGDMGVEIPP 273 (606)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHTTC--CCEEEECCCSHHHHHTHHHHHHH-------------CSCEEEEHHHHHHHSCG
T ss_pred EEEECCCCCHHHHHHHHHHHHhcCC--CCeEEEEeCCHHHHHhHHHHHHh-------------CCEEEEccccccCcCCH
Confidence 4578999999999999999998884 78999999999999999999996 12599988886666553
Q ss_pred HhHhHHHHHHHHHHHHHHHHhCCeEEE
Q 004448 605 LSAAWQLYKTQEELVKVAKQYGVKLTM 631 (753)
Q Consensus 605 laa~W~Ly~Aq~~L~~v~~~~gV~l~f 631 (753)
..+..+|+++.+.|+++|..+.+
T Consensus 274 ----e~vp~~Qk~ii~~~~~~gkpvi~ 296 (606)
T 3t05_A 274 ----EKVPMVQKDLIRQCNKLGKPVIT 296 (606)
T ss_dssp ----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred ----HHHHHHHHHHHHHHHHcCCCeEE
Confidence 58999999999999999998876
No 18
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=87.88 E-value=0.24 Score=53.47 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=73.8
Q ss_pred cEEecCCCCcccHHHHHHHHHHc--CCC----------------------------CCCccccccCChHHHhchHHHHHH
Q 004448 525 AYIISMATAPSDVLAVELLQREC--RVK----------------------------QPLRVVPLFEKLADLEAAPASVAR 574 (753)
Q Consensus 525 ~yIISmt~s~sDvL~Vl~L~k~~--gl~----------------------------~~l~VvPLFETi~DL~~a~~im~~ 574 (753)
..++.|++++.|+-++.-+++.. |.. ..+.|+++.||...+.|+++|+.
T Consensus 120 gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~~av~nldeIaa- 198 (339)
T 1izc_A 120 GIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESVKGVENVDAIAA- 198 (339)
T ss_dssp EEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSHHHHHTHHHHHT-
T ss_pred EEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChHHHHHHHHHHhc-
Confidence 47999999999999998888752 210 13679999999999999999984
Q ss_pred HhccHHHHHhhcCceEEEEeecCCCcc--------hhHHhHhHHHHHHHHHHHHHHHHhCCeE
Q 004448 575 LFSIDWYRNRISGKQEVMIGYSDSGKD--------AGRLSAAWQLYKTQEELVKVAKQYGVKL 629 (753)
Q Consensus 575 Ll~~p~yr~~l~~~QeVMlGYSDS~KD--------gG~laa~W~Ly~Aq~~L~~v~~~~gV~l 629 (753)
+.+.--||+|-.|=+.+ -|+-. .-++..++.+++..|+++|+.+
T Consensus 199 ----------~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~-~p~v~~a~~~iv~aaraaGk~~ 250 (339)
T 1izc_A 199 ----------MPEIHGLMFGPGDYMIDAGLDLNGALSGVP-HPTFVEAMTKFSTAAQRNGVPI 250 (339)
T ss_dssp ----------CTTCCCEEECHHHHHHHTTCCTTCCTTSCC-CHHHHHHHHHHHHHHHHTTCCE
T ss_pred ----------CCCCCEEEECHHHHHhhhhcccchhhCCCC-CHHHHHHHHHHHHHHHHhCCce
Confidence 33456689998876666 44433 5779999999999999999987
No 19
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=87.12 E-value=0.86 Score=52.63 Aligned_cols=91 Identities=15% Similarity=0.176 Sum_probs=79.4
Q ss_pred cCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcch
Q 004448 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (753)
+--.++||.++++|+.++--++++.|. ..+.|+.-.||.+.++|.++|++.- =-||+|=.|=+=.-
T Consensus 187 ~d~v~~sfV~~a~dv~~~~~~l~~~~~-~~~~iiakIE~~eav~nldeIl~~~-------------DgImVargDLgvei 252 (587)
T 2e28_A 187 IDFIAASFVRRASDVLEIRELLEAHDA-LHIQIIAKIENEEGVANIDEILEAA-------------DGLMVARGDLGVEI 252 (587)
T ss_dssp CSEEEESSCCSHHHHHHHHHHHHHTTC-TTSEEEEEECSHHHHHTHHHHHHHS-------------SEEEEEHHHHHHHS
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHcCC-CCceEEEEECCHHHHHhHHHHHHhC-------------CEEEEcCchhhhhc
Confidence 445789999999999999999988873 3688999999999999999999961 36999998877777
Q ss_pred hHHhHhHHHHHHHHHHHHHHHHhCCeEEE
Q 004448 603 GRLSAAWQLYKTQEELVKVAKQYGVKLTM 631 (753)
Q Consensus 603 G~laa~W~Ly~Aq~~L~~v~~~~gV~l~f 631 (753)
|+ ..+..+|+++.+.|+++|..+..
T Consensus 253 ~~----~~v~~~qk~ii~~~~~~gkpvi~ 277 (587)
T 2e28_A 253 PA----EEVPLIQKLLIKKSNMLGKPVIT 277 (587)
T ss_dssp CG----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred CH----HHHHHHHHHHHHHHHHcCCCeEE
Confidence 75 89999999999999999998876
No 20
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=84.21 E-value=0.76 Score=47.68 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=75.3
Q ss_pred cEEecCCCCcccHHHHHHHHHHc--C---CC--------------------CCCccccccCChHHHhchHHHHHHHhccH
Q 004448 525 AYIISMATAPSDVLAVELLQREC--R---VK--------------------QPLRVVPLFEKLADLEAAPASVARLFSID 579 (753)
Q Consensus 525 ~yIISmt~s~sDvL~Vl~L~k~~--g---l~--------------------~~l~VvPLFETi~DL~~a~~im~~Ll~~p 579 (753)
.-++.|++++.|+-++.-.+|.- | +. ..+.|+++.||.+.+.|+++|..
T Consensus 93 ~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~------ 166 (267)
T 2vws_A 93 TLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILD------ 166 (267)
T ss_dssp EEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHT------
T ss_pred EEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhC------
Confidence 57999999999988886665421 1 00 13779999999999999999974
Q ss_pred HHHHhhcCceEEEEeecCCCcchhHHhH--hHHHHHHHHHHHHHHHHhCCeEEEe
Q 004448 580 WYRNRISGKQEVMIGYSDSGKDAGRLSA--AWQLYKTQEELVKVAKQYGVKLTMF 632 (753)
Q Consensus 580 ~yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~v~~~~gV~l~fF 632 (753)
..+.--+|+|-.|=+.+-|.... .=++..++++++..|+++|+.+.+|
T Consensus 167 -----~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~ 216 (267)
T 2vws_A 167 -----VEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFL 216 (267)
T ss_dssp -----STTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred -----CCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEe
Confidence 33567799999988888775321 1258899999999999999998775
No 21
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=83.24 E-value=0.78 Score=48.25 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=74.9
Q ss_pred cEEecCCCCcccHHHHHHHHHHc--C---C--------------------CCCCccccccCChHHHhchHHHHHHHhccH
Q 004448 525 AYIISMATAPSDVLAVELLQREC--R---V--------------------KQPLRVVPLFEKLADLEAAPASVARLFSID 579 (753)
Q Consensus 525 ~yIISmt~s~sDvL~Vl~L~k~~--g---l--------------------~~~l~VvPLFETi~DL~~a~~im~~Ll~~p 579 (753)
.-+++|.+++.|+-++.-.+|.- | + ...+.|+++.||.+.+.|+++|+.
T Consensus 114 ~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa------ 187 (287)
T 2v5j_A 114 TLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILD------ 187 (287)
T ss_dssp EEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHT------
T ss_pred EEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhC------
Confidence 67999999999988887665421 1 1 013779999999999999999984
Q ss_pred HHHHhhcCceEEEEeecCCCcchhHHhH--hHHHHHHHHHHHHHHHHhCCeEEEe
Q 004448 580 WYRNRISGKQEVMIGYSDSGKDAGRLSA--AWQLYKTQEELVKVAKQYGVKLTMF 632 (753)
Q Consensus 580 ~yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~v~~~~gV~l~fF 632 (753)
+.+.--||+|-.|=+.+-|.... .=++..++++++..|+++|+.+.+|
T Consensus 188 -----~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~ 237 (287)
T 2v5j_A 188 -----VEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL 237 (287)
T ss_dssp -----STTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred -----cCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe
Confidence 33567799999887777775421 2357899999999999999998554
No 22
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=81.51 E-value=0.85 Score=47.52 Aligned_cols=86 Identities=17% Similarity=0.201 Sum_probs=67.5
Q ss_pred cCcEEecCCCCcccHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCCcch
Q 004448 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~~gl~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (753)
+..+++-|++++.|+-.+- .+.|+|+.||...+.|+.+|.. ..+..-+++|-.|=..+-
T Consensus 85 ~~gi~lPKv~s~~~v~~~~----------~~~i~~~IET~~~v~~~~eIaa-----------~~~v~~l~~G~~Dl~~~l 143 (273)
T 1u5h_A 85 YTTVMLPKAESAAQVIELA----------PRDVIALVETARGAVCAAEIAA-----------ADPTVGMMWGAEDLIATL 143 (273)
T ss_dssp CCEEEETTCCCHHHHHTTT----------TSEEEEEECSHHHHHTHHHHHH-----------STTEEEEEECHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHHHh----------hCCEEEEEeCHHHHHhHHHHhc-----------CCCCcEEEecHHHHHHHh
Confidence 4568999999999987642 6889999999999999988862 346777888888776666
Q ss_pred hHHhH-------hHHHHHHHHHHHHHHHHhCCeE
Q 004448 603 GRLSA-------AWQLYKTQEELVKVAKQYGVKL 629 (753)
Q Consensus 603 G~laa-------~W~Ly~Aq~~L~~v~~~~gV~l 629 (753)
|.-.. .=.+..|..+++..|+.+|+..
T Consensus 144 G~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~a 177 (273)
T 1u5h_A 144 GGSSSRRADGAYRDVARHVRSTILLAASAFGRLA 177 (273)
T ss_dssp TCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCCccccccHHHHHHHHHHHHHHHHcCCCc
Confidence 64321 1147788899999999999965
No 23
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=75.98 E-value=4.9 Score=44.55 Aligned_cols=121 Identities=12% Similarity=0.092 Sum_probs=82.0
Q ss_pred HHHHH-HHHHHHHHHcC---CCCccCcEEecCCCCcccHHHHHHHH----HHcCCCC-CCccccccCChHH---HhchHH
Q 004448 503 EEIAD-VLDTFHVISEL---PADSFGAYIISMATAPSDVLAVELLQ----RECRVKQ-PLRVVPLFEKLAD---LEAAPA 570 (753)
Q Consensus 503 ~~~~~-~l~~f~~i~~~---~~~a~g~yIISmt~s~sDvL~Vl~L~----k~~gl~~-~l~VvPLFETi~D---L~~a~~ 570 (753)
..+.. ..+-+..+... ....+..+++-+++++.||-.+.-+. +..|+.. ++.|+|+.||... |.|+.+
T Consensus 92 ~~T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~e 171 (433)
T 3oyz_A 92 PETRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRD 171 (433)
T ss_dssp HHHHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHH
T ss_pred CCChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHH
Confidence 34443 44444555431 11345678999999999998776554 3457754 7899999999999 999999
Q ss_pred HHHHHhccHHHHHhhcCceEEEEeecCCCcchhHHhHh---HHHHHHHHHHHHHHHHhCCeE
Q 004448 571 SVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAA---WQLYKTQEELVKVAKQYGVKL 629 (753)
Q Consensus 571 im~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa~---W~Ly~Aq~~L~~v~~~~gV~l 629 (753)
|+... ++...+..-+++|-.|=.++-|.-... =.+..|...++..|+.+|+.+
T Consensus 172 IAaas------r~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~a 227 (433)
T 3oyz_A 172 EMGKP------TNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVA 227 (433)
T ss_dssp HHHCT------TCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHhhh------ccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 98621 000135677888888877776654332 135567778899999999865
No 24
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=52.49 E-value=28 Score=39.52 Aligned_cols=107 Identities=12% Similarity=0.162 Sum_probs=82.3
Q ss_pred cCcEEecCCCCcccHHHHHHHHHHcCC-----CCCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecC
Q 004448 523 FGAYIISMATAPSDVLAVELLQRECRV-----KQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSD 597 (753)
Q Consensus 523 ~g~yIISmt~s~sDvL~Vl~L~k~~gl-----~~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSD 597 (753)
+--.-+|+.++++||.++--+.++.|- ..++.|+.=+|+.+.++|-++|++. -=-||+.=-|
T Consensus 230 vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~-------------sDgIMVARGD 296 (526)
T 4drs_A 230 LDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSE-------------SDGIMVARGD 296 (526)
T ss_dssp CSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHH-------------SSEEEEECTT
T ss_pred cCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhh-------------ccEEEEECCc
Confidence 445778999999999999999988764 2578899999999999999999985 2358886544
Q ss_pred CCcchhHHhHhHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCcch
Q 004448 598 SGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPT 646 (753)
Q Consensus 598 S~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~fFHGRGGsvgRGGGP~ 646 (753)
= |.=..-..+..+|+.+.+.|+++|..+..==--=.|.=.-.=||
T Consensus 297 L----gvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PT 341 (526)
T 4drs_A 297 L----GMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPT 341 (526)
T ss_dssp H----HHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCC
T ss_pred c----cccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCC
Confidence 3 44444578999999999999999999887433334444444554
No 25
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=36.46 E-value=16 Score=39.22 Aligned_cols=41 Identities=29% Similarity=0.517 Sum_probs=24.0
Q ss_pred HhccHHHHHhhcCceEEEEeecCCCcchhHHhHhHHHHHHHHHHHHHHHHhCCeEEEecCCC
Q 004448 575 LFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRG 636 (753)
Q Consensus 575 Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~fFHGRG 636 (753)
||+.+.|....+ .-+.+||||-+ .|.....+.|+.- |||=-
T Consensus 93 L~d~~~~~~~~~--~K~~iGySDiT-----------------aL~~~l~~~G~~T--~hGp~ 133 (346)
T 4eys_A 93 LFENDQLQKVIK--QKIFLGFSDTT-----------------MNHLMLHKLGIKT--FYGQS 133 (346)
T ss_dssp HHTTSHHHHHCC--CCEEEECTTHH-----------------HHHHHHHHTTCCC--EESCC
T ss_pred hhchhhhhHhhC--CcEEEEecHHH-----------------HHHHHHHhcCCcE--EEccc
Confidence 344434444333 37999999986 2322334567653 99964
No 26
>2d9e_A Peregrin; four-helix bundle, transcription activator, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.48 E-value=1.4e+02 Score=26.84 Aligned_cols=23 Identities=17% Similarity=0.288 Sum_probs=18.2
Q ss_pred CCCCHHHhhHHHHHHHHHHHhcC
Q 004448 399 AYTHVEQFLEPLELCYRSLCACG 421 (753)
Q Consensus 399 ~Y~~~~ell~dL~~i~~sL~~~~ 421 (753)
.|.+.++|.+|+++|..-=...+
T Consensus 61 ~Y~s~~ef~~D~~li~~Na~~yN 83 (121)
T 2d9e_A 61 RYLNFDDFEEDFNLIVSNCLKYN 83 (121)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHC
Confidence 69999999999988766555544
No 27
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=26.48 E-value=60 Score=34.44 Aligned_cols=147 Identities=14% Similarity=0.142 Sum_probs=87.4
Q ss_pred cEEecCCCCcccHHHHHHHHHH-------cCCC--CCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEee
Q 004448 525 AYIISMATAPSDVLAVELLQRE-------CRVK--QPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGY 595 (753)
Q Consensus 525 ~yIISmt~s~sDvL~Vl~L~k~-------~gl~--~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGY 595 (753)
.-+|-|.++++++..+--+.++ .|.. ..+.|.+..||...+.++++|... ..-+.||-
T Consensus 138 ~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~-------------vD~~siGt 204 (324)
T 2xz9_A 138 QIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKE-------------VDFFSIGT 204 (324)
T ss_dssp EEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTT-------------CSEEEECH
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh-------------CcEEEECH
Confidence 3578999999997766666542 3653 258899999999999999999853 23344444
Q ss_pred cCC----------CcchhHHhH--hHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCcchh-hhhhcCCCCcccCce
Q 004448 596 SDS----------GKDAGRLSA--AWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTH-LAILSQPPDTIHGSL 662 (753)
Q Consensus 596 SDS----------~KDgG~laa--~W~Ly~Aq~~L~~v~~~~gV~l~fFHGRGGsvgRGGGP~~-~ailaqP~gsv~g~i 662 (753)
.|= |...|++-. .=++.++-+.+++.|+++|+.+.++ |-+ +|-|.. .....+.-. +-.
T Consensus 205 nDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvc----ge~--~~dp~~~~~l~~lG~~---~~s 275 (324)
T 2xz9_A 205 NDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMC----GEM--AGDPLAAVILLGLGLD---EFS 275 (324)
T ss_dssp HHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEEC----SGG--GGCHHHHHHHHHHTCC---EEE
T ss_pred HHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeec----Ccc--CCCHHHHHHHHHCCCC---EEE
Confidence 432 222222211 2358889999999999999998664 112 334432 222222221 111
Q ss_pred eeecccchhhhhcCChhHHHHHHHHHHHHHHHc
Q 004448 663 RVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEH 695 (753)
Q Consensus 663 R~TeQGEvI~~kYg~~~~A~r~LE~~~~a~l~~ 695 (753)
=-..|...+-..|..-. ....+.++..++..
T Consensus 276 i~p~~i~~~~~~~~~~~--~~~~~~~~~~~l~~ 306 (324)
T 2xz9_A 276 MSATSIPEIKNIIRNVE--YEKAKEIAEKALNM 306 (324)
T ss_dssp ECGGGHHHHHHHHTTSC--HHHHHHHHHHHHTC
T ss_pred EChhHHHHHHHHHHHcC--HHHHHHHHHHHHcC
Confidence 22345555555555443 34455666555543
No 28
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=23.34 E-value=47 Score=37.25 Aligned_cols=49 Identities=35% Similarity=0.695 Sum_probs=34.2
Q ss_pred CceEEEE----eecCCCcchhHHhHhHHHHHHHHHHHHHHHHhCCeEE---EecCCCCCCCC
Q 004448 587 GKQEVMI----GYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLT---MFHGRGGTVGR 641 (753)
Q Consensus 587 ~~QeVMl----GYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~---fFHGRGGsvgR 641 (753)
|+.-||+ |.--+..++ -=+|+=|+ +|.++++++|.|+. =||+-||.||=
T Consensus 47 GVdGVmvDVWWGiVE~~~P~---~YdWsgY~---~L~~mv~~~GLKlq~vmSFHqCGgNVGD 102 (498)
T 1fa2_A 47 GCDGVMVDVWWGIIEAKGPK---QYDWSAYR---ELFQLVKKCGLKIQAIMSFHQCGGNVGD 102 (498)
T ss_dssp TCCEEEEEEEHHHHTCSBTT---BCCCHHHH---HHHHHHHHTTCEEEEEEECSCBCCCTTC
T ss_pred CCCEEEEEeEeeeeccCCCC---ccCcHHHH---HHHHHHHHcCCeEEEEEEeeecCCCCCC
Confidence 5666776 333332222 23788886 68899999999975 49999998874
No 29
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=23.14 E-value=48 Score=37.19 Aligned_cols=49 Identities=31% Similarity=0.655 Sum_probs=34.1
Q ss_pred CceEEEE----eecCCCcchhHHhHhHHHHHHHHHHHHHHHHhCCeEE---EecCCCCCCCC
Q 004448 587 GKQEVMI----GYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLT---MFHGRGGTVGR 641 (753)
Q Consensus 587 ~~QeVMl----GYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~---fFHGRGGsvgR 641 (753)
|+.-||+ |.--+..++ -=+|+=|+ +|.++++++|.|+. =||+-||.||=
T Consensus 46 GVdGVmvDVWWGiVE~~~P~---~YdWsgY~---~l~~mv~~~GLKlq~vmSFHqCGgNVGD 101 (495)
T 1wdp_A 46 GVDGVMVDVWWGIIELKGPK---QYDWRAYR---SLLQLVQECGLTLQAIMSFHQCGGNVGD 101 (495)
T ss_dssp TCCEEEEEEEHHHHTCSSTT---CCCCHHHH---HHHHHHHHTTCEEEEEEECSCBCCSTTC
T ss_pred CCCEEEEEeEeeeeccCCCC---ccCcHHHH---HHHHHHHHcCCeEEEEEEeeecCCCCCC
Confidence 5666776 333332222 23788886 68899999999975 49999998874
No 30
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=22.28 E-value=1.4e+02 Score=33.93 Aligned_cols=95 Identities=12% Similarity=0.073 Sum_probs=63.6
Q ss_pred CcEEecCCCCcccHHHHHHHH----HHcCCC-CCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCC
Q 004448 524 GAYIISMATAPSDVLAVELLQ----RECRVK-QPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDS 598 (753)
Q Consensus 524 g~yIISmt~s~sDvL~Vl~L~----k~~gl~-~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS 598 (753)
..+++..++++.|+-.+--+. +..|+. .++.+.+|.||+..+.|..+|+..+ +. ...-+.+|.-|=
T Consensus 208 ~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al------~~---rv~gLn~G~~Dy 278 (532)
T 3cuz_A 208 PYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHAL------RD---HIVGLNCGRWDY 278 (532)
T ss_dssp CEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHT------TT---TEEEEECCSHHH
T ss_pred CeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhc------cC---CceEEEcCHHHH
Confidence 457889999999987654333 446775 5799999999999999999998643 22 334566676553
Q ss_pred Ccch-------h-HH---------hHhHHHHHHHHHHH-HHHHHhCCeE
Q 004448 599 GKDA-------G-RL---------SAAWQLYKTQEELV-KVAKQYGVKL 629 (753)
Q Consensus 599 ~KDg-------G-~l---------aa~W~Ly~Aq~~L~-~v~~~~gV~l 629 (753)
..|- | ++ .+- +..|-.++. ..|+.+|+..
T Consensus 279 ~~s~i~~~~~~~~~~lpdr~~~~~~~~--~l~Ay~~llv~ac~a~G~~a 325 (532)
T 3cuz_A 279 IFSYIKTLKNYPDRVLPDRQAVTMDKP--FLNAYSRLLIKTCHKRGAFA 325 (532)
T ss_dssp HHHHHHHTTTCGGGCCCCGGGCCTTSH--HHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhhcccCCCccCccccccccchH--HHHHHHHHHHHHHHHcCCCC
Confidence 3332 2 11 222 334555555 8899999864
No 31
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=22.08 E-value=78 Score=37.72 Aligned_cols=100 Identities=10% Similarity=0.102 Sum_probs=68.9
Q ss_pred cEEecCCCCcccHHHHHHHHHHcCCC--CC-CccccccCChHHHhchHHHHHHHhccHHHHHhh--c-CceEEE-EeecC
Q 004448 525 AYIISMATAPSDVLAVELLQRECRVK--QP-LRVVPLFEKLADLEAAPASVARLFSIDWYRNRI--S-GKQEVM-IGYSD 597 (753)
Q Consensus 525 ~yIISmt~s~sDvL~Vl~L~k~~gl~--~~-l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l--~-~~QeVM-lGYSD 597 (753)
.-+|-|+++++++-.+.-++++.|+. .. +.|.+..||...+.++++|... + ..+ + |-..-+ +|++=
T Consensus 643 ~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~-v------D~~siGtnDLtq~tlg~~R 715 (794)
T 2ols_A 643 EIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQY-F------DGFSIGSNDMTQLTLGLDR 715 (794)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTT-S------SEEEEEHHHHHHHHHTCCT
T ss_pred eEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHh-C------CEEEECHHHHHHHHhCCCC
Confidence 46889999999999999999998875 23 7899999999999999999863 0 000 1 111122 45441
Q ss_pred CCcchhHH--hHhHHHHHHHHHHHHHHHHhCCeEEE
Q 004448 598 SGKDAGRL--SAAWQLYKTQEELVKVAKQYGVKLTM 631 (753)
Q Consensus 598 S~KDgG~l--aa~W~Ly~Aq~~L~~v~~~~gV~l~f 631 (753)
.|-.-+++ ..+=++.++-+.+++.|+++|+.+.+
T Consensus 716 ~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgi 751 (794)
T 2ols_A 716 DSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGI 751 (794)
T ss_dssp TCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEE
Confidence 11111110 11235889999999999999999854
No 32
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=21.32 E-value=1.9e+02 Score=32.75 Aligned_cols=95 Identities=7% Similarity=0.026 Sum_probs=63.8
Q ss_pred cEEecCCCCcccHHHHHHHH----HHcCCC-CCCccccccCChHHHhchHHHHHHHhccHHHHHhhcCceEEEEeecCCC
Q 004448 525 AYIISMATAPSDVLAVELLQ----RECRVK-QPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSG 599 (753)
Q Consensus 525 ~yIISmt~s~sDvL~Vl~L~----k~~gl~-~~l~VvPLFETi~DL~~a~~im~~Ll~~p~yr~~l~~~QeVMlGYSDS~ 599 (753)
.+++..++++.|+-.+--+. +..|+. .++.+.+|.||+..+-|..+|+..+ +.++ --+.+|.-|=.
T Consensus 206 yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~------~~rv---~gLn~G~~Dy~ 276 (528)
T 3cux_A 206 YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYEL------KDHS---AGLNCGRWDYI 276 (528)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHT------GGGE---EEEEECSHHHH
T ss_pred EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhc------cCce---eEEecCHHHHH
Confidence 67889999999987665433 446875 4799999999999999999999543 3333 33556655533
Q ss_pred cc--------hhHH---------hHhHHHHHHHHHHHHHHHHhCCeE
Q 004448 600 KD--------AGRL---------SAAWQLYKTQEELVKVAKQYGVKL 629 (753)
Q Consensus 600 KD--------gG~l---------aa~W~Ly~Aq~~L~~v~~~~gV~l 629 (753)
.| +.++ ++-|- +--...++..|+++|+..
T Consensus 277 ~s~i~t~~~~~~~vlpdR~~v~~~~p~~-~ay~~~lV~ac~a~G~~a 322 (528)
T 3cux_A 277 FSFLKAFRNHNEFLLPDRAQVTMTAPFM-RAYSLKVIQTCHRRNAPA 322 (528)
T ss_dssp HHHHHHTTTCTTCCCCCGGGCCTTSHHH-HHHHHHHHHHHHHTTCCE
T ss_pred HHhhhhccCCccccchhhhhcccccHHH-HHHHHHHHHHHHHcCCCC
Confidence 32 2221 12233 333456778999999853
No 33
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=21.05 E-value=56 Score=36.94 Aligned_cols=49 Identities=35% Similarity=0.688 Sum_probs=33.9
Q ss_pred CceEEEE----eecCCCcchhHHhHhHHHHHHHHHHHHHHHHhCCeEE---EecCCCCCCCC
Q 004448 587 GKQEVMI----GYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLT---MFHGRGGTVGR 641 (753)
Q Consensus 587 ~~QeVMl----GYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~---fFHGRGGsvgR 641 (753)
++.-||+ |.--+..++ -=+|+=|+ +|.++++++|.|+. =||+-||.||=
T Consensus 44 GVdGVmvDVWWGiVE~~~P~---~YdWsgY~---~L~~mvr~~GLKlq~vmSFHqCGgNVGD 99 (535)
T 2xfr_A 44 GVDGVMVDVWWGLVEGKGPK---AYDWSAYK---QLFELVQKAGLKLQAIMSFHQCGGNVGD 99 (535)
T ss_dssp TCCEEEEEEEHHHHTCSSTT---CCCCHHHH---HHHHHHHHTTCEEEEEEECSCBCCSTTC
T ss_pred CCCEEEEEeEeeeeccCCCC---ccCcHHHH---HHHHHHHHcCCeEEEEEEeeecCCCCCC
Confidence 5666776 333322222 23788887 68899999999975 49999998864
Done!