Your job contains 1 sequence.
>004450
MEFEPLDIENGVIEFDEMRNSNGEDDSERPSDYYDHVLPDNSRNFETLNGDPNLEPFEGM
EFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRGSSENRSKR
QRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDKVHCLRSHRHVSGPARSLID
TLQAAGMGPSGVMSVLIKESGGVNNVGFTKVDCQNYMSSSRQRTLGSGGQVVIDNLKQMQ
AEDPSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTFDTTYRMNRYRIPFAPFTGL
NHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQDRIIRAAVAQVFPGT
RHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDEFESCWESLIRRYNLVGN
EWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINASTNIQALIKQYEKAI
ASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFMKFQEELVETLAYPATIVND
TGSEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSGIICRHILAVFRVTNILTLP
SHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLCREVIKYVEEGAESAHIYNM
AMDVLREAAKKVAAAKKYGPGVTQNSLFSGCQQHHSCSVDQDKKIQELTVELENASQRCE
AYRTKLLAVLKDMEEEKTKMLVKVENVRLDLKG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004450
(753 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 2245 9.3e-233 1
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 1452 1.0e-148 1
TAIR|locus:2121003 - symbol:FRS9 "FAR1-related sequence 9... 1447 3.4e-148 1
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 957 4.1e-119 2
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 1170 7.7e-119 1
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 914 6.9e-115 2
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 1007 1.4e-101 1
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 747 6.1e-95 2
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 943 8.7e-95 1
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 860 5.4e-86 1
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 806 2.9e-80 1
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 723 1.8e-71 1
TAIR|locus:2182778 - symbol:FRS10 "FAR1-related sequence ... 633 6.2e-62 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 312 3.9e-34 2
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 326 8.9e-32 2
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 252 2.8e-30 2
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 244 8.5e-27 2
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 2245 (795.3 bits), Expect = 9.3e-233, P = 9.3e-233
Identities = 412/716 (57%), Positives = 548/716 (76%)
Query: 53 NLEPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFR-- 110
+LEP++G+EF+SE+AA+ FYNSYARRIGFSTRVS +RSRRDG+II RQ VC++EGFR
Sbjct: 70 DLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNM 129
Query: 111 --RGSSENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDKVHCLRSH 168
+ + + KR RTITRVGCKA ++VK Q SGKW VS +K+HNHELVPPD+VHCLRSH
Sbjct: 130 NEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSH 189
Query: 169 RHVSGPARSLIDTLQAAGMGPSGVMSVLIKESGGVNNVGFTKVDCQNYMSSSRQRTLGSG 228
R +SGPA++LIDTLQAAGMGP +MS LIKE GG++ VGFT+VDC+NYM ++RQ+++
Sbjct: 190 RQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSIEGE 249
Query: 229 GQVVIDNLKQMQAEDPSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTFDTTYRMN 288
Q+++D L+QM A++P+FF + QG + + GN+FWAD + M++++FGDTVTFDTTYR N
Sbjct: 250 IQLLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTFDTTYRSN 309
Query: 289 RYRIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQDRI 348
RYR+PFAPFTG+NHHGQP+LFGCA ++NE+EASF+WLF WLAAMS P SITTD D +
Sbjct: 310 RYRLPFAPFTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMSAHPPVSITTDHDAV 369
Query: 349 IRAAVAQVFPGTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDEFESCW 408
IRAA+ VFPG RHRFCKW++ ++ QE+LS V+ HP FE++F +C+N+TE+V++FE CW
Sbjct: 370 IRAAIMHVFPGARHRFCKWHILKKCQEKLSHVFLKHPSFESDFHKCVNLTESVEDFERCW 429
Query: 409 ESLIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINASTN 468
SL+ +Y L +EWLQ++Y+ R+QWVPVYLRDTFF +MS+T SD+INSYFDGYINASTN
Sbjct: 430 FSLLDKYELRDHEWLQAIYSDRRQWVPVYLRDTFFADMSLTHRSDSINSYFDGYINASTN 489
Query: 469 IQALIKQYEKAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFMKFQEELV 528
+ K YEKA+ SR EKEVKADYDT+N+ PVLKTPSPMEKQ + LYTRK+FM+FQEELV
Sbjct: 490 LSQFFKLYEKALESRLEKEVKADYDTMNSPPVLKTPSPMEKQASELYTRKLFMRFQEELV 549
Query: 529 ETLAYPATIVNDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSGIICRHIL 588
TL + A+ +D G + Y+VAK+GE KAHFV++N+ E +A+CSCQ+FEFSGIICRHIL
Sbjct: 550 GTLTFMASKADDDGDLVTYQVAKYGEAHKAHFVKFNVLEMRANCSCQMFEFSGIICRHIL 609
Query: 589 AVFRVTNILTLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLCREVIKYV 648
AVFRVTN+LTLP +YILKRWTRNAKS V+ + + L ++ ES RY+ L + +V
Sbjct: 610 AVFRVTNLLTLPPYYILKRWTRNAKSSVIFDDYNLHAYANYLESHTVRYNTLRHKASNFV 669
Query: 649 EEGAESAHIYNMAMDVLREXXXXXXXXXXYGPGVTQ-------NSLFSGCQQHHSCSV-- 699
+E +S + ++A+ L+E T +S+ G Q +
Sbjct: 670 QEAGKSLYTCDVAVVALQEAAKTVSLAMNKEVRRTMANRHFKASSVTGGKHQQEVLAQPE 729
Query: 700 ---DQDKKIQELTVELENASQRCEAYRTKLLAVLKDMEEEKTKMLVKVENVRLDLK 752
+ DKKI +L ELE A+++CEAYRT LL+VLK+ME++K ++ +KV+N+++ LK
Sbjct: 730 PEDEMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNIKISLK 785
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 1452 (516.2 bits), Expect = 1.0e-148, P = 1.0e-148
Identities = 288/566 (50%), Positives = 379/566 (66%)
Query: 103 VCSREGFRRGSSENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDKV 162
V RE F SS RSKR+ + + C A + ++ QG KW V+K +KEH H L + +
Sbjct: 86 VSVRE-FVCSSSSKRSKRRLSES---CDAMVRIELQGHEKWVVTKFVKEHTHGLASSNML 141
Query: 163 HCLRSHRHVSGPARSLIDTLQAAGMGPSGVMSVLIK-ESGGVNNVGFTKVDCQNYMSSSR 221
HCLR RH + +S + Q PSG+M V + S G N M+++
Sbjct: 142 HCLRPRRHFANSEKS---SYQEGVNVPSGMMYVSMDANSRGARNAS---------MATNT 189
Query: 222 QRTLGSGGQVVIDNLKQMQAEDPSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTF 281
+RT+G +++ K+MQAE+P FF A Q D +N N+FWAD+ SR+ Y++FGDTVT
Sbjct: 190 KRTIGRDAHNLLEYFKRMQAENPGFFYAVQLDEDNQMSNVFWADSRSRVAYTHFGDTVTL 249
Query: 282 DTTYRMNRYRIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSI 341
DT YR N++R+PFAPFTG+NHHGQ +LFGCAL+L+ES+ SFIWLF+ +L AM + P S+
Sbjct: 250 DTRYRCNQFRVPFAPFTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSL 309
Query: 342 TTDQDRIIRAAVAQVFPGTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETV 401
TDQDR I+ A QVFPG RH KW+V RE QE+L+ V ++P F+ E CIN TET+
Sbjct: 310 VTDQDRAIQIAAGQVFPGARHCINKWDVLREGQEKLAHVCLAYPSFQVELYNCINFTETI 369
Query: 402 DEFESCWESLIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDG 461
+EFES W S+I +Y+L +EWL S+YN R QWVPVY RD+FF + +Q S+FDG
Sbjct: 370 EEFESSWSSVIDKYDLGRHEWLNSLYNARAQWVPVYFRDSFFAAVFPSQGYSG--SFFDG 427
Query: 462 YINASTNIQALIKQYEKAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFM 521
Y+N T + + YE+A+ S E E++AD DTVNT PVLKTPSPME Q ANL+TRKIF
Sbjct: 428 YVNQQTTLPMFFRLYERAMESWFEMEIEADLDTVNTPPVLKTPSPMENQAANLFTRKIFG 487
Query: 522 KFQEELVETLAYPATIVNDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSG 581
KFQEELVET A+ A + D G+ +RVA F + KA+ V + E +A+CSCQ+FE SG
Sbjct: 488 KFQEELVETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRANCSCQMFEHSG 547
Query: 582 IICRHILAVFRVTNILTLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLC 641
I+CRH+L VF VTNILTLP HYIL+RWTRNAKS V L+ HV + + +SS RY++LC
Sbjct: 548 ILCRHVLTVFTVTNILTLPPHYILRRWTRNAKSMVELDEHV---SENGHDSSIHRYNHLC 604
Query: 642 REVIKYVEEGAESAHIYNMAMDVLRE 667
RE IKY EEGA +A YN+A+ LRE
Sbjct: 605 REAIKYAEEGAITAEAYNIALGQLRE 630
Score = 238 (88.8 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 57/155 (36%), Positives = 85/155 (54%)
Query: 23 GEDDSERPSDYYDHVLPDNSRNFETLNGDPNLEPFEGMEFDSEQAARIFYNSYARRIGFS 82
G++ PSD DNS + G EP GMEF+SE+ A+ FY+ Y+R++GF+
Sbjct: 18 GDEGDVEPSDCSGQNNMDNSLGVQDEIGIA--EPCVGMEFNSEKEAKSFYDEYSRQLGFT 75
Query: 83 TRVSVYQRSRRDGSIICRQIVCSREGFRRGSSENRSKRQRTITRVGCKAQMTVKKQGSGK 142
+++ R DGS+ R+ VCS SS RSKR+ + + C A + ++ QG K
Sbjct: 76 SKLL----PRTDGSVSVREFVCS-------SSSKRSKRRLSES---CDAMVRIELQGHEK 121
Query: 143 WAVSKLIKEHNHELVPPDKVHCLRSHRHVSGPARS 177
W V+K +KEH H L + +HCLR RH + +S
Sbjct: 122 WVVTKFVKEHTHGLASSNMLHCLRPRRHFANSEKS 156
Score = 56 (24.8 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 32/133 (24%), Positives = 64/133 (48%)
Query: 409 ESLIRRYNLV-GNEWLQSMYNVR-QQWVPVYLR--DTFFGEM-------SMTQASDNINS 457
+ +IRR+NL G QS+ ++ + PV L DT M S+T ++ N+
Sbjct: 677 DEMIRRFNLNDGGARAQSVSDLNLPRMAPVSLHRDDTAPENMVALPCLKSLTWGMESKNT 736
Query: 458 YFDGYINASTNIQALIKQYEKAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTR 517
G + A N++ + Y K ++ + +VK +V EP+L++ + + +Q+++ R
Sbjct: 737 MPGGRV-AVINLK--LHDYRKFPSA--DMDVKFQLSSVTLEPMLRSMAYISEQLSSPANR 791
Query: 518 KIFMKFQEELVET 530
+ + + ET
Sbjct: 792 VAVINLKLQDTET 804
>TAIR|locus:2121003 [details] [associations]
symbol:FRS9 "FAR1-related sequence 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL035538 EMBL:AL161593 InterPro:IPR018289
Pfam:PF10551 HOGENOM:HOG000241939 UniGene:At.31195 UniGene:At.48951
EMBL:BX827635 EMBL:AK229615 IPI:IPI00517549 PIR:T05644
RefSeq:NP_195530.2 PaxDb:Q9SZL7 PRIDE:Q9SZL7
EnsemblPlants:AT4G38170.1 GeneID:829973 KEGG:ath:AT4G38170
TAIR:At4g38170 eggNOG:NOG320990 InParanoid:Q9SZL7 OMA:RCEVYRA
Genevestigator:Q9SZL7 Uniprot:Q9SZL7
Length = 545
Score = 1447 (514.4 bits), Expect = 3.4e-148, P = 3.4e-148
Identities = 277/530 (52%), Positives = 368/530 (69%)
Query: 232 VIDNLKQMQAEDPSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTFDTTYRMN-RY 290
V++ LK+ Q E+P F A + D GN+FWAD R+NY+YFGDT+ FDTTYR RY
Sbjct: 21 VLNYLKRRQLENPGFLYAIEDD----CGNVFWADPTCRLNYTYFGDTLVFDTTYRRGKRY 76
Query: 291 RIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQDRIIR 350
++PFA FTG NHHGQPVLFGCAL+LNESE+SF WLF+ WL AMS P SIT + DR+I+
Sbjct: 77 QVPFAAFTGFNHHGQPVLFGCALILNESESSFAWLFQTWLQAMSAPPPPSITVEPDRLIQ 136
Query: 351 AAVAQVFPGTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDEFESCWES 410
AV++VF TR RF + +F E +E+L+ V+Q+HP FE+EF C+ TET EFE+ W+S
Sbjct: 137 VAVSRVFSQTRLRFSQPLIFEETEEKLAHVFQAHPTFESEFINCVTETETAAEFEASWDS 196
Query: 411 LIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINASTNIQ 470
++RRY + N+WLQS+YN RQQWV V++RDTF+GE+S + S +NS+F G+++AST +Q
Sbjct: 197 IVRRYYMEDNDWLQSIYNARQQWVRVFIRDTFYGELSTNEGSSILNSFFQGFVDASTTMQ 256
Query: 471 ALIKQYEKAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFMKFQEELVET 530
LIKQYEKAI S EKE+KADY+ N+ PV+KTPSPMEKQ A+LYTR F+KFQEE VET
Sbjct: 257 MLIKQYEKAIDSWREKELKADYEATNSTPVMKTPSPMEKQAASLYTRAAFIKFQEEFVET 316
Query: 531 LAYPATIVNDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSGIICRHILAV 590
LA PA I++D+G+ YRVAKFGE K H V ++ E KA+CSCQ+FE+SGIICRHILAV
Sbjct: 317 LAIPANIISDSGTHTTYRVAKFGEVHKGHTVSFDSLEVKANCSCQMFEYSGIICRHILAV 376
Query: 591 FRVTNILTLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLCREVIKYVEE 650
F N+L LPS Y+L+RWT+ AK + ++ QES +++L +E KYVEE
Sbjct: 377 FSAKNVLALPSRYLLRRWTKEAK--IRGTEEQPEFSNGCQESLNLCFNSLRQEATKYVEE 434
Query: 651 GAESAHIYNMAMDVLREXXXXXXXXXXYGPG--VTQNSLFSGCQQHHSCSV------DQD 702
GA+S IY +AMD L E PG + + + + + +++
Sbjct: 435 GAKSIQIYKVAMDALDEAAKKVAAASNRTPGTRLPNGEAYPSEEARETANATNHPGGEKE 494
Query: 703 KKIQELTVELENASQRCEAYRTKLLAVLKDMEEEKTKMLVKVENVRLDLK 752
+ I ELT ELE QRCE YR LL++L+DMEE+K ++ +KV+N RL LK
Sbjct: 495 RTILELTAELERTGQRCEVYRANLLSILRDMEEQKFQLSLKVQNARLSLK 544
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 957 (341.9 bits), Expect = 4.1e-119, Sum P(2) = 4.1e-119
Identities = 194/485 (40%), Positives = 291/485 (60%)
Query: 186 GMGPSGVMSVLIKESGGVNNVGFTKV-DCQNYMSSSRQRTLGSGGQ-VVIDNLKQMQAED 243
G +G+ + +GG+++V ++ D N++SS+R+ T+G V++D + QAED
Sbjct: 281 GKKNAGMKKITDDVTGGLDSVDLIELNDLSNHISSTRENTIGKEWYPVLLDYFQSKQAED 340
Query: 244 PSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTFDTTYRMNRYRIPFAPFTGLNHH 303
FF A + D + +IFWAD+ SR S FGD V FDT+YR Y +PFA F G NHH
Sbjct: 341 MGFFYAIELDSNGSCMSIFWADSRSRFACSQFGDAVVFDTSYRKGDYSVPFATFIGFNHH 400
Query: 304 GQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQDRIIRAAVAQVFPGTRHR 363
QPVL G AL+ +ES+ +F WLF+ WL AMSGR P S+ DQD I+ AVAQVFPGT HR
Sbjct: 401 RQPVLLGGALVADESKEAFSWLFQTWLRAMSGRRPRSMVADQDLPIQQAVAQVFPGTHHR 460
Query: 364 FCKWNVFREAQERLSDVYQSHPH-FEAEFQRCINMTETVDEFESCWESLIRRYNLVGNEW 422
F W + + +E L +S P+ F+ E+++C+ ++T EF++ W SL+ +Y L N W
Sbjct: 461 FSAWQIRSKERENL----RSFPNEFKYEYEKCLYQSQTTVEFDTMWSSLVNKYGLRDNMW 516
Query: 423 LQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINASTNIQALIKQYEKAIAS 482
L+ +Y R++WVP YLR +FFG + + D ++ +N+ T+++ I +YE+ +
Sbjct: 517 LREIYEKREKWVPAYLRASFFGGIHVDGTFD---PFYGTSLNSLTSLREFISRYEQGLEQ 573
Query: 483 RHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFMKFQEELVETLAYPATIVNDTG 542
R E+E K D+++ N +P L+T P+E+Q LYT IF FQ EL ++ Y + G
Sbjct: 574 RREEERKEDFNSYNLQPFLQTKEPVEEQCRRLYTLTIFRIFQSELAQSYNYLGLKTYEEG 633
Query: 543 SEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSGIICRHILAVFRVTNILTLPSH 602
+ + V K G E + H V ++ ASCSCQ+FE+ G++CRHIL VF + +I LPS
Sbjct: 634 AISRFLVRKCGNENEKHAVTFSASNLNASCSCQMFEYEGLLCRHILKVFNLLDIRELPSR 693
Query: 603 YILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLCREVIKYVEEGAESAHIYNMAM 662
YIL RWT+NA+ G + + G+ S Q+ A +L KY+E G S Y +A
Sbjct: 694 YILHRWTKNAEFGFVRDVES-GVTS--QDLKALMIWSLREAASKYIEFGTSSLEKYKLAY 750
Query: 663 DVLRE 667
+++RE
Sbjct: 751 EIMRE 755
Score = 236 (88.1 bits), Expect = 4.1e-119, Sum P(2) = 4.1e-119
Identities = 47/107 (43%), Positives = 66/107 (61%)
Query: 50 GDPNLEPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGF 109
GD LEP+ G+EFD+ + AR +YNSYA R GF R RSR DG++ R+ VCS+EGF
Sbjct: 22 GDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF 81
Query: 110 RRGSSENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHEL 156
+ S R GC A + V+++ +GKW + ++ KEHNH+L
Sbjct: 82 QLNS------------RTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116
Score = 219 (82.2 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 47/107 (43%), Positives = 63/107 (58%)
Query: 55 EPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRGSS 114
EP+ G+EF+S A FY +YA +GF R+ RS+ DGSI R+ VCS+EGF+ S
Sbjct: 189 EPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHPS- 247
Query: 115 ENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDK 161
R+GC A M +K+Q SG W V +L K+HNH+L P K
Sbjct: 248 -----------RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDLEPGKK 283
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 1170 (416.9 bits), Expect = 7.7e-119, P = 7.7e-119
Identities = 233/623 (37%), Positives = 363/623 (58%)
Query: 49 NGDPNLEPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREG 108
+GD +LEP G++FD+ +AA IFY YA+ +GF+T + +RS++ I + CSR G
Sbjct: 44 SGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYG 103
Query: 109 FRRGS-SENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDKVHCLRS 167
S S S R+ T+ + CKA M VK++ GKW + + +K+HNHEL+P H R
Sbjct: 104 VTPESESSGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELLPALAYH-FRI 162
Query: 168 HRHVSGPARSLIDTLQAAGMGPSGVMSVLIKESGGVNNVG-FTKVDCQNYMSSSRQRTLG 226
R+V ++ ID L A + + ++SGG N+G + D + + R L
Sbjct: 163 QRNVKLAEKNNIDILHAVSERTKKMYVEMSRQSGGYKNIGSLLQTDVSSQVDKGRYLALE 222
Query: 227 SG-GQVVIDNLKQMQAEDPSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTFDTTY 285
G QV+++ K+++ E+P FF A + + N+FWADA SR +Y F D V+FDTTY
Sbjct: 223 EGDSQVLLEYFKRIKKENPKFFYAIDLNEDQRLRNLFWADAKSRDDYLSFNDVVSFDTTY 282
Query: 286 RMNRYRIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQ 345
++P A F G+NHH QP+L GCAL+ +ES +F+WL + WL AM GR+P I TDQ
Sbjct: 283 VKFNDKLPLALFIGVNHHSQPMLLGCALVADESMETFVWLIKTWLRAMGGRAPKVILTDQ 342
Query: 346 DRIIRAAVAQVFPGTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDEFE 405
D+ + +AV+++ P TRH F W+V + E S V + H +F +F +CI + T DEF+
Sbjct: 343 DKFLMSAVSELLPNTRHCFALWHVLEKIPEYFSHVMKRHENFLLKFNKCIFRSWTDDEFD 402
Query: 406 SCWESLIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINA 465
W ++ ++ L +EWL ++ RQ+WVP ++ D F MS +Q S+++NS+FD YI+
Sbjct: 403 MRWWKMVSQFGLENDEWLLWLHEHRQKWVPTFMSDVFLAGMSTSQRSESVNSFFDKYIHK 462
Query: 466 STNIQALIKQYEKAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFMKFQE 525
++ ++QY + +R+E+E AD+DT + +P LK+PSP EKQ+A YT IF KFQ
Sbjct: 463 KITLKEFLRQYGVILQNRYEEESVADFDTCHKQPALKSPSPWEKQMATTYTHTIFKKFQV 522
Query: 526 ELVETLA-YPATIVNDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSGIIC 584
E++ +A +P D +RV E+ V ++ + + C C++FE+ G +C
Sbjct: 523 EVLGVVACHPRKEKEDENMAT-FRVQDC-EKDDDFLVTWSKTKSELCCFCRMFEYKGFLC 580
Query: 585 RHILAVFRVTNILTLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLCREV 644
RH L + ++ ++P YILKRWT++AKSGVL G + + ++ RY++LC
Sbjct: 581 RHALMILQMCGFASIPPQYILKRWTKDAKSGVLA-----GEGADQIQTRVQRYNDLCSRA 635
Query: 645 IKYVEEGAESAHIYNMAMDVLRE 667
+ EEG S YN+A+ L E
Sbjct: 636 TELSEEGCVSEENYNIALRTLVE 658
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 914 (326.8 bits), Expect = 6.9e-115, Sum P(2) = 6.9e-115
Identities = 184/490 (37%), Positives = 286/490 (58%)
Query: 182 LQAAGMGPSGVMSVLIKESGGVNNVGFTKVDC--QNYMSSSRQRTLGSGGQ-VVIDNLKQ 238
L+ +G+ + +GG+++V +++ N++ +R+ +G +++D +
Sbjct: 299 LEPGKKNDAGMKKIPDDGTGGLDSVDLIELNDFGNNHIKKTRENRIGKEWYPLLLDYFQS 358
Query: 239 MQAEDPSFFCAFQGDFEN-TTGNIFWADANSRMNYSYFGDTVTFDTTYRMNRYRIPFAPF 297
Q ED FF A + D N + +IFWAD+ +R S FGD+V FDT+YR Y +PFA
Sbjct: 359 RQTEDMGFFYAVELDVNNGSCMSIFWADSRARFACSQFGDSVVFDTSYRKGSYSVPFATI 418
Query: 298 TGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQDRIIRAAVAQVF 357
G NHH QPVL GCA++ +ES+ +F+WLF+ WL AMSGR P SI DQD I+ A+ QVF
Sbjct: 419 IGFNHHRQPVLLGCAMVADESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPIQQALVQVF 478
Query: 358 PGTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDEFESCWESLIRRYNL 417
PG HR+ W + + +E L + S F+ E+++CI T+T+ EF+S W +LI +Y L
Sbjct: 479 PGAHHRYSAWQIREKERENLIP-FPSE--FKYEYEKCIYQTQTIVEFDSVWSALINKYGL 535
Query: 418 VGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINASTNIQALIKQYE 477
+ WL+ +Y R+ WVP YLR +FF + + + I +F ++A T ++ I +YE
Sbjct: 536 RDDVWLREIYEQRENWVPAYLRASFFAGIPI---NGTIEPFFGASLDALTPLREFISRYE 592
Query: 478 KAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFMKFQEELVETLAYPATI 537
+A+ R E+E K D+++ N +P L+T P+E+Q LYT +F FQ ELV++ Y
Sbjct: 593 QALEQRREEERKEDFNSYNLQPFLQTKEPVEEQCRRLYTLTVFRIFQNELVQSYNYLCLK 652
Query: 538 VNDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSGIICRHILAVFRVTNIL 597
+ G+ + V K G E + H V ++ +SCSCQ+FE G++CRHIL VF + +I
Sbjct: 653 TYEEGAISRFLVRKCGNESEKHAVTFSASNLNSSCSCQMFEHEGLLCRHILKVFNLLDIR 712
Query: 598 TLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLCREVIKYVEEGAESAHI 657
LPS YIL RWT+NA+ G + + + S Q+ A +L KY+E G S
Sbjct: 713 ELPSRYILHRWTKNAEFGFVRD---MESGVSAQDLKALMVWSLREAASKYIEFGTSSLEK 769
Query: 658 YNMAMDVLRE 667
Y +A +++RE
Sbjct: 770 YKLAYEIMRE 779
Score = 239 (89.2 bits), Expect = 6.9e-115, Sum P(2) = 6.9e-115
Identities = 51/126 (40%), Positives = 72/126 (57%)
Query: 31 SDYYDHVLPDNSRNFETLNGDPNLEPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQR 90
S Y +L N+ E G +EP+ G+EFD+ + AR FYN+YA R GF R R
Sbjct: 18 SSYPVRILHHNNGISEDEEGGSGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYR 77
Query: 91 SRRDGSIICRQIVCSREGFRRGSSENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIK 150
SR DG++ R+ VCS+EGF+ S R GC A + V+++ +GKW + ++ K
Sbjct: 78 SRTDGTVSSRRFVCSKEGFQLNS------------RTGCTAFIRVQRRDTGKWVLDQIQK 125
Query: 151 EHNHEL 156
EHNHEL
Sbjct: 126 EHNHEL 131
Score = 220 (82.5 bits), Expect = 7.0e-113, Sum P(2) = 7.0e-113
Identities = 48/107 (44%), Positives = 62/107 (57%)
Query: 55 EPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRGSS 114
EP+ G+EF S A FY +YA +GF R+ RS+ DGSI R+ VCSREGF+ S
Sbjct: 210 EPYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQHPS- 268
Query: 115 ENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDK 161
R+GC A M +K+Q SG W V +L K+HNH+L P K
Sbjct: 269 -----------RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDLEPGKK 304
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 203/609 (33%), Positives = 341/609 (55%)
Query: 60 MEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRGSSENRSK 119
MEF++ + A +FY YA+ +GF T +RSR I + C R G ++ S + +
Sbjct: 1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDD--AI 58
Query: 120 RQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDKVHCLRSHRHVSGPARSLI 179
R ++GCKA M VK++ GKW V +KEHNH+L+P ++ H RSHR+ L+
Sbjct: 59 NPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLLP-EQAHYFRSHRNTE-----LV 112
Query: 180 DTLQAAGMGPSGVMSVLIKESGGVNNVGFTKVDCQNYMSSSRQRTLGSG-GQVVIDNLKQ 238
+ + K +++ F +N R+ L +G +++++ L +
Sbjct: 113 KSNDSRLRRKKNTPLTDCKHLSAYHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFLMR 172
Query: 239 MQAEDPSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTFDTTYRMNRYRIPFAPFT 298
MQ E+P FF A ++ N+FW DA +Y F D V+F+T+Y +++Y++P F
Sbjct: 173 MQEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFV 232
Query: 299 GLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQDRIIRAAVAQVFP 358
G+NHH QPVL GC LL +++ +++WL ++WL AM G+ P + TDQ+ I+AA+A V P
Sbjct: 233 GVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLP 292
Query: 359 GTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDEFESCWESLIRRYNLV 418
TRH +C W+V + L F + +CI + + +EF+ W LI +++L
Sbjct: 293 ETRHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFHLR 352
Query: 419 GNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINASTNIQALIKQYEK 478
W++S+Y R+ W P ++R F +SM S+++NS FD Y++ T+++ ++ Y
Sbjct: 353 DVPWMRSLYEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSLKEFLEGYGL 412
Query: 479 AIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFMKFQEELVETLAYPATIV 538
+ R+E+E KAD+D + P LK+PSP EKQ+ +Y+ +IF +FQ E++ A T
Sbjct: 413 MLEDRYEEEAKADFDAWHEAPELKSPSPFEKQMLLVYSHEIFRRFQLEVLGAAACHLTKE 472
Query: 539 NDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSGIICRHILAVFRVTNILT 598
++ G+ Y V F +EQK + V ++ F+ CSC+ FE+ G +CRH + V +++ + T
Sbjct: 473 SEEGTT--YSVKDFDDEQK-YLVDWDEFKSDIYCSCRSFEYKGYLCRHAIVVLQMSGVFT 529
Query: 599 LPSHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLCREVIKYVEEGAESAHIY 658
+P +Y+L+RWT A+ N H + +S+ R+++LCR I EEG+ S Y
Sbjct: 530 IPINYVLQRWTNAAR-----NRHQISRNLELVQSNIRRFNDLCRRAIILGEEGSLSQESY 584
Query: 659 NMAMDVLRE 667
++AM ++E
Sbjct: 585 DIAMFAMKE 593
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 747 (268.0 bits), Expect = 6.1e-95, Sum P(2) = 6.1e-95
Identities = 149/438 (34%), Positives = 238/438 (54%)
Query: 230 QVVIDNLKQMQAEDPSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTFDTTYRMNR 289
++++++ +MQ + P FF A D + N+FW DA ++ +Y F D V FDT Y N
Sbjct: 171 KLLLEHFMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLFDTFYVRNG 230
Query: 290 YRIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQDRII 349
YRIPFAPF G++HH Q VL GCAL+ SE+++ WLF WL A+ G++P + TDQD+++
Sbjct: 231 YRIPFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMITDQDKLL 290
Query: 350 RAAVAQVFPGTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDEFESCWE 409
V +VFP RH FC W+V + E L+ F F C+ + T + FE W
Sbjct: 291 SDIVVEVFPDVRHIFCLWSVLSKISEMLNPFVSQDDGFMESFGNCVASSWTDEHFERRWS 350
Query: 410 SLIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINASTNI 469
++I ++ L NEW+Q ++ R++WVP Y +S + S +I S+FD Y+N+
Sbjct: 351 NMIGKFELNENEWVQLLFRDRKKWVPHYFHGICLAGLSGPERSGSIASHFDKYMNSEATF 410
Query: 470 QALIKQYEKAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFMKFQEELVE 529
+ + Y K + R + E K D + + +P L++ EKQ++ +YT F KFQ E+
Sbjct: 411 KDFFELYMKFLQYRCDVEAKDDLEYQSKQPTLRSSLAFEKQLSLIYTDAAFKKFQAEVPG 470
Query: 530 TLAYPATIVNDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSGIICRHILA 589
++ + G+ I+R+ F EE++ FV N A CSC LFE+ G +C+H +
Sbjct: 471 VVSCQLQKEREDGTTAIFRIEDF-EERQNFFVALNNELLDACCSCHLFEYQGFLCKHAIL 529
Query: 590 VFRVTNILTLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLCREVIKYVE 649
V + ++ +PS YILKRW++ + N + ++ AR+D+LCR +K
Sbjct: 530 VLQSADVSRVPSQYILKRWSKKGNNKEDKNDKCATI-----DNRMARFDDLCRRFVKLGV 584
Query: 650 EGAESAHIYNMAMDVLRE 667
+ S A+ +L E
Sbjct: 585 VASLSDEACKTALKLLEE 602
Score = 217 (81.4 bits), Expect = 6.1e-95, Sum P(2) = 6.1e-95
Identities = 46/127 (36%), Positives = 71/127 (55%)
Query: 59 GMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRGSSENRS 118
GM+F+S++AA FY YAR +GF + +RS+R G I +I CSR G +R + +
Sbjct: 41 GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKAT--A 98
Query: 119 KRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDKVHCLRSHRHVSGPARSL 178
R+ + GCKA + +K++ KW + +KEHNHE+ P D +R +G A ++
Sbjct: 99 INPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEICPDDFYVSVRGKNKPAG-ALAI 157
Query: 179 IDTLQAA 185
LQ A
Sbjct: 158 KKGLQLA 164
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 204/616 (33%), Positives = 332/616 (53%)
Query: 53 NLEPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRG 112
NLEP GMEF+S A FY Y+R +GF+T + +RS+ I + CSR G +R
Sbjct: 67 NLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKR- 125
Query: 113 SSENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKL-IKEHNHELVPPDK---VHC-LRS 167
+ ++ R + + +G+ +K K H PD +H +R
Sbjct: 126 ------EYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVRE 179
Query: 168 HRHVSGPARSLIDTLQAAGMGPSGVMSVLIKESGGVNNVGFTKVDCQNYMSSSRQRTLGS 227
H H PA+++ + + + + + K+ V K D ++ R ++ +
Sbjct: 180 HNHELLPAQAVSEQTRK-------IYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLSVET 232
Query: 228 GG-QVVIDNLKQMQAEDPSFFCAFQ-GDFENTTGNIFWADANSRMNYSYFGDTVTFDTTY 285
G ++++D L +MQ+ + +FF A GD + N+FW DA SR NY F D V+ DTTY
Sbjct: 233 GDFKILLDFLSRMQSLNSNFFYAVDLGD-DQRVKNVFWVDAKSRHNYGSFCDVVSLDTTY 291
Query: 286 RMNRYRIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQ 345
N+Y++P A F G+N H Q ++ GCAL+ +ES A++ WL E WL A+ G++P + T+
Sbjct: 292 VRNKYKMPLAIFVGVNQHYQYMVLGCALISDESAATYSWLMETWLRAIGGQAPKVLITEL 351
Query: 346 DRIIRAAVAQVFPGTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDEFE 405
D ++ + V ++FP TRH W+V + E L V + H +F +F++CI + ++F
Sbjct: 352 DVVMNSIVPEIFPNTRHCLFLWHVLMKVSENLGQVVKQHDNFMPKFEKCIYKSGKDEDFA 411
Query: 406 SCWESLIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINA 465
W + R+ L ++W+ S+Y R++W P Y+ D MS +Q +D+IN++FD Y++
Sbjct: 412 RKWYKNLARFGLKDDQWMISLYEDRKKWAPTYMTDVLLAGMSTSQRADSINAFFDKYMHK 471
Query: 466 STNIQALIKQYEKAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFMKFQE 525
T++Q +K Y+ + R E+E KAD + N +P +K+PSP EK V+ +YT +F KFQ
Sbjct: 472 KTSVQEFVKVYDTVLQDRCEEEAKADSEMWNKQPAMKSPSPFEKSVSEVYTPAVFKKFQI 531
Query: 526 ELVETLAYPATIVNDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKASCSCQLFEFSGIICR 585
E++ +A N + +RV F E + V +N + + SC C+LFE+ G +CR
Sbjct: 532 EVLGAIACSPREENRDATCSTFRVQDF-ENNQDFMVTWNQTKAEVSCICRLFEYKGYLCR 590
Query: 586 HILAVFRVTNILTLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLCREVI 645
H L V + ++ ++PS YILKRWT++AKS H G Q + RY++LC +
Sbjct: 591 HTLNVLQCCHLSSIPSQYILKRWTKDAKSR-----HFSGEPQQLQ-TRLLRYNDLCERAL 644
Query: 646 KYVEEGAESAHIYNMA 661
K EE + S YN+A
Sbjct: 645 KLNEEASLSQESYNIA 660
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 200/626 (31%), Positives = 320/626 (51%)
Query: 56 PFEGMEFDSEQAARIFYNSYARRIGFSTRV--SVYQRSRRD--GSIICRQIVCSREGFRR 111
P GMEF+S A +YN YA +GF RV S ++R ++ G+++C CS +GF+R
Sbjct: 85 PAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLC----CSSQGFKR 140
Query: 112 GSSENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDKVHCLRSHRHV 171
+ NR +++ TR GC A + +++ S +W V ++ +HNH L R + V
Sbjct: 141 INDVNRVRKE---TRTGCPAMIRMRQVDSKRWRVVEVTLDHNHLLGCKLYKSVKRKRKCV 197
Query: 172 SGPARSLIDTLQAAGMGPSGVMSVLIKESGGVNNVGFTKVDCQNYMSSSRQRTLGSGGQV 231
S P S T++ + ++ VN QN S L G
Sbjct: 198 SSPV-SDAKTIKL-------YRACVVDNGSNVNPNSTLNKKFQNSTGSPDLLNLKRGDSA 249
Query: 232 VIDN-LKQMQAEDPSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTFDTTYRMNRY 290
I N +MQ +P+FF + E N+FWADA S+++ SYFGD + D++Y ++
Sbjct: 250 AIYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYISGKF 309
Query: 291 RIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITTDQDRIIR 350
IP FTG+NHHG+ L C L E+ S+ WL + WL+ M RSP +I TD+ + +
Sbjct: 310 EIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMK-RSPQTIVTDRCKPLE 368
Query: 351 AAVAQVFPGTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDEFESCWES 410
AA++QVFP + RF ++ R+ E+L ++ ++ F + + T V EFE+ W
Sbjct: 369 AAISQVFPRSHQRFSLTHIMRKIPEKLGGLH-NYDAVRKAFTKAVYETLKVVEFEAAWGF 427
Query: 411 LIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINSYFDGYINASTNIQ 470
++ + ++ NEWL+S+Y R +W PVYL+DTFF ++ + + +F+ Y++ T ++
Sbjct: 428 MVHNFGVIENEWLRSLYEERAKWAPVYLKDTFFAGIAAAHPGETLKPFFERYVHKQTPLK 487
Query: 471 ALIKQYEKAIASRHEKEVKADYD--TVNTEPVLKTPSPMEKQVANLYTRKIFMKFQEELV 528
+ +YE A+ +H +E +D + T+NT LKT E Q++ +YTR +F KFQ E+
Sbjct: 488 EFLDKYELALQKKHREETLSDIESQTLNTAE-LKTKCSFETQLSRIYTRDMFKKFQIEVE 546
Query: 529 ETLA-YPATIVNDTGSEIIYRVAKF--GEEQKAHF----VRYNIFEKKASCSCQLFEFSG 581
E + + T V+ G +I+ V + GE + V YN + C C F F G
Sbjct: 547 EMYSCFSTTQVHVDGPFVIFLVKERVRGESSRREIRDFEVLYNRSVGEVRCICSCFNFYG 606
Query: 582 IICRHILAVFRVTNILTLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQESSAARYDNLC 641
+CRH L V + +P YIL RW ++ K + + G +D L
Sbjct: 607 YLCRHALCVLNFNGVEEIPLRYILPRWRKDYKRLHFADNGLTGFVDGTDR--VQWFDQLY 664
Query: 642 REVIKYVEEGAESAHIYNMAMDVLRE 667
+ ++ VEEGA S Y +AM VL+E
Sbjct: 665 KNSLQVVEEGAVSLDHYKVAMQVLQE 690
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 198/635 (31%), Positives = 322/635 (50%)
Query: 56 PFEGMEFDSEQAARIFYNSYARRIGFSTRV--SVYQRSRRD--GSIICRQIVCSREGFRR 111
P GMEF+S A FYNSYAR +GF+ RV S +R+ ++ G+++C C+ +GF+
Sbjct: 95 PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLC----CNCQGFKL 150
Query: 112 GSSENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVPPDKVHCLRSHRHV 171
+ S+R+ T R GC+A + ++ +W V ++ +HNH P + H +SH+
Sbjct: 151 -LKDAHSRRKET--RTGCQAMIRLRLIHFDRWKVDQVKLDHNHSF-DPQRAHNSKSHKKS 206
Query: 172 SGPARSLIDT-------LQAAGMGPSGVMSVLIKESGGVN-NVGFTKVDCQNYMSSSRQR 223
S A T +Q + +++ + G + + G T ++ SSR+
Sbjct: 207 SSSASPATKTNPEPPPHVQVRTIKLYRTLALDTPPALGTSLSSGETSDLSLDHFQSSRRL 266
Query: 224 TLGSGGQVVIDNLKQMQAEDPSFFCAFQGDFENTTGNIFWADANSRMNYSYFGDTVTFDT 283
L G + + D Q+Q P+F + + N+FW DA +R YS+FGD + FDT
Sbjct: 267 ELRGGFRALQDFFFQIQLSSPNFLYLMDLADDGSLRNVFWIDARARAAYSHFGDVLLFDT 326
Query: 284 TYRMNRYRIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMSGRSPNSITT 343
T N Y +P F G+NHHG +L GC LL ++S +++WLF AWL M GR P T
Sbjct: 327 TCLSNAYELPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCMLGRPPQIFIT 386
Query: 344 DQDRIIRAAVAQVFPGTRHRFCKWNVFREAQERLSDVYQSHPHFEAEFQRCINMTETVDE 403
+Q + +R AV++VFP HR +V + + + Q F R + V+E
Sbjct: 387 EQCKAMRTAVSEVFPRAHHRLSLTHVLHNICQSVVQL-QDSDLFPMALNRVVYGCLKVEE 445
Query: 404 FESCWESLIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASDNINS--YFDG 461
FE+ WE +I R+ + NE ++ M+ R+ W PVYL+DTF ++T N+ + F G
Sbjct: 446 FETAWEEMIIRFGMTNNETIRDMFQDRELWAPVYLKDTFLAG-ALTFPLGNVAAPFIFSG 504
Query: 462 YINASTNIQALIKQYEKAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQVANLYTRKIFM 521
Y++ +T+++ ++ YE + ++ +E D +++ P LKT P E Q+A ++T +IF
Sbjct: 505 YVHENTSLREFLEGYESFLDKKYTREALCDSESLKLIPKLKTTHPYESQMAKVFTMEIFR 564
Query: 522 KFQEEL-VETLAYPATIVNDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKAS------CSC 574
+FQ+E+ + + T V+ GS Y V K E K I+E A+ C C
Sbjct: 565 RFQDEVSAMSSCFGVTQVHSNGSASSY-VVKEREGDKVRDFEV-IYETSAAAQVRCFCVC 622
Query: 575 QLFEFSGIICRHILAVFRVTNILTLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQE--S 632
F F+G CRH+L + + +P YIL+RW ++ K L +V S R + +
Sbjct: 623 GGFSFNGYQCRHVLLLLSHNGLQEVPPQYILQRWRKDVKR--L---YVAEFGSGRVDIMN 677
Query: 633 SAARYDNLCREVIKYVEEGAESAHIYNMAMDVLRE 667
Y++L R ++ VE+G S A + RE
Sbjct: 678 PDQWYEHLHRRAMQVVEQGMRSKEHCRAAWEAFRE 712
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 182/589 (30%), Positives = 302/589 (51%)
Query: 40 DNSRNFETLNGDPNLEPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDG---S 96
DN+ + E ++ N P+ G F + A FY+++A+R GFS R ++ +DG
Sbjct: 35 DNNLSLEAVH---NAIPYLGQIFLTHDTAYEFYSTFAKRCGFSIRR--HRTEGKDGVGKG 89
Query: 97 IICRQIVCSREGFR--RGSSENRSKRQRTITRVGCKAQMTVKKQ---GSGKWAVSKLIKE 151
+ R VC R G + SE + +R R +R GC+A + + K GS +W V+
Sbjct: 90 LTRRYFVCHRAGNTPIKTLSEGKPQRNRRSSRCGCQAYLRISKLTELGSTEWRVTGFANH 149
Query: 152 HNHELVPPDKVHCLRSHRHVSGPARSLIDTLQAAGMGPSGVMSVL-IKESGGVNNVGFTK 210
HNHEL+ P++V L ++R +S +S I G+ +M +L +++ + FT+
Sbjct: 150 HNHELLEPNQVRFLPAYRSISDADKSRILMFSKTGISVQQMMRLLELEKCVEPGFLPFTE 209
Query: 211 VDCQNYMSSSRQRTLGSGGQVVIDNLKQMQA---EDPSFFCAFQGDFENTTGNIFWADAN 267
D +N + S ++ L + ID L+ Q+ +DP+F F D + NI W+ A+
Sbjct: 210 KDVRNLLQSFKK--LDPEDEN-IDFLRMCQSIKEKDPNFKFEFTLDANDKLENIAWSYAS 266
Query: 268 SRMNYSYFGDTVTFDTTYRMNRYRIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFE 327
S +Y FGD V FDTT+R++ +P + G+N++G P FGC LL +E+ S+ W +
Sbjct: 267 SIQSYELFGDAVVFDTTHRLSAVEMPLGIWVGVNNYGVPCFFGCVLLRDENLRSWSWALQ 326
Query: 328 AWLAAMSGRSPNSITTDQDRIIRAAVAQVFPGTRHRFCKWNVFREAQERLS-DVYQSHPH 386
A+ M+G++P +I TD + ++ A+A P T+H C W V + + + + +
Sbjct: 327 AFTGFMNGKAPQTILTDHNMCLKEAIAGEMPATKHALCIWMVVGKFPSWFNAGLGERYND 386
Query: 387 FEAEFQRCINMTETVDEFESCWESLIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEM 446
++AEF R ++ E+V+EFE W ++ + L N + ++Y R W YLR F M
Sbjct: 387 WKAEFYRLYHL-ESVEEFELGWRDMVNSFGLHTNRHINNLYASRSLWSLPYLRSHFLAGM 445
Query: 447 SMTQASDNINSYFDGYINASTNIQALIKQYEKAIASRHEKEVKADYDTVNTEPV-LKTPS 505
++T S IN++ +++A T + ++Q + + + + N + + LKT +
Sbjct: 446 TLTGRSKAINAFIQRFLSAQTRLAHFVEQVAVVVDFKDQATEQQTMQQ-NLQNISLKTGA 504
Query: 506 PMEKQVANLYTRKIFMKFQEELVETLAYPATIVNDTGSEIIYRVAKFGEEQKAHFVRYNI 565
PME A++ T F K QE+LV Y A+ D G ++ K +K ++V
Sbjct: 505 PMESHAASVLTPFAFSKLQEQLVLAAHY-ASFQMDEGY-LVRHHTKLDGGRKVYWVPQ-- 560
Query: 566 FEKKASCSCQLFEFSGIICRHILAVFRVTNILTLPSHYILKRWTRNAKS 614
E SCSCQLFEFSG +CRH L V N +P Y+ RW R + S
Sbjct: 561 -EGIISCSCQLFEFSGFLCRHALRVLSTGNCFQVPDRYLPLRWRRISTS 608
>TAIR|locus:2182778 [details] [associations]
symbol:FRS10 "FAR1-related sequence 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AF262043
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00525509 RefSeq:NP_198205.2
UniGene:At.55070 PaxDb:Q9LKR4 EnsemblPlants:AT5G28530.1
GeneID:832948 KEGG:ath:AT5G28530 TAIR:At5g28530 eggNOG:NOG320567
HOGENOM:HOG000006468 OMA:DECAQAF PhylomeDB:Q9LKR4
ProtClustDB:CLSN2687754 Genevestigator:Q9LKR4 Uniprot:Q9LKR4
Length = 685
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 175/613 (28%), Positives = 288/613 (46%)
Query: 51 DPNLEPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFR 110
D P+ G F ++ A +Y+++AR+ GFS R + S+ G + R VC R GF
Sbjct: 50 DTVFTPYVGQIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNLG-VYRRDFVCYRSGFN 108
Query: 111 --RGSSENRSKRQRTITRVGCKAQMTVKKQ---GSGKWAVSKLIKEHNHELVPPDKVHCL 165
R + R+R R GC ++ + K+ G W VS+ HNHEL+ D+V L
Sbjct: 109 QPRKKANVEHPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLL 168
Query: 166 RSHRHVSGPARSLIDTLQAAGMGPSGVMSVLIKESGGVNN-VGFTKVDCQNYMSSSRQRT 224
++R + + I L AG + ++ +L E G V+ + F + D +N++ + ++
Sbjct: 169 PAYRKIQQSDQERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKKSV 228
Query: 225 LGSGGQVV----IDNLKQMQ-----AE-DPSFFCAFQGDFENTTGNIFWADANSRMNYSY 274
+ + D L+ ++ AE D F D NI WA +S YS
Sbjct: 229 QENDAFMTEKRESDTLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSL 288
Query: 275 FGDTVTFDTTYRMNRYRIPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFEAWLAAMS 334
FGD V FDT+YR Y + F G++++G+ +L GC LL +ES SF W + ++ M
Sbjct: 289 FGDVVVFDTSYRSVPYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMR 348
Query: 335 GRSPNSITTDQDRIIRAAVAQVFPGTRHRFCKWNVFREAQERLSDVYQSH-PHFEAEFQR 393
GR P +I TD D ++ A+ + P T H ++ + S SH F A F
Sbjct: 349 GRHPQTILTDIDTGLKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSHYEEFRAGFDM 408
Query: 394 CINMTETVDEFESCWESLIRRYNLVGNEWLQSMYNVRQQWVPVYLRDTFFGEMSMTQASD 453
VDEFE W+ L+ R+ LV + +Y+ R W+P +R+ F + ++ +
Sbjct: 409 LCR-AGNVDEFEQQWDLLVTRFGLVPDRHAALLYSCRASWLPCCIREHFVAQTMTSEFNL 467
Query: 454 NINSYFDGYINASTNIQALIKQ--YEKAIASRHEKEVKADYDTVNTEPVLKTPSPMEKQV 511
+I+S+ ++ +T +Q L+++ + + A+ K++ + T P LKT PME
Sbjct: 468 SIDSFLKRVVDGATCMQLLLEESALQVSAAASLAKQILPRF----TYPSLKTCMPMEDHA 523
Query: 512 ANLYTRKIFMKFQEELVETLAYP-ATIVNDTGSEIIYRVAKFGEEQKAHFVRYNIFEKKA 570
+ T F Q E+V ++ Y A + N G I++ K E V +N ++
Sbjct: 524 RGILTPYAFSVLQNEMVLSVQYAVAEMAN--GPFIVHHYKKMEGEC---CVIWNPENEEI 578
Query: 571 SCSCQLFEFSGIICRHILAVFRVTNILTLPSHYILKRWTRNAKSGVLLNGHVLGLASSRQ 630
CSC+ FE SGI+CRH L V V N +P Y L RW + + N + G+
Sbjct: 579 QCSCKEFEHSGILCRHTLRVLTVKNCFHIPEQYFLLRWRQESPHVATENQNGQGIGDDSA 638
Query: 631 ESSAARYDNLCRE 643
++ + + L E
Sbjct: 639 QTFHSLTETLLTE 651
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 312 (114.9 bits), Expect = 3.9e-34, Sum P(2) = 3.9e-34
Identities = 60/127 (47%), Positives = 89/127 (70%)
Query: 35 DHVLPDNSRNFETLNGD--PNLEPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSR 92
D + +NS +T+ + P +EPF GMEF+SE+AA+ FY++YA +GF RV ++RS
Sbjct: 10 DVEMMENSDVMKTVTDEASPMVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSM 69
Query: 93 RDGSIICRQIVCSREGFRRGSSE-NRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKE 151
RDG+++ R++VC++EGFRR + S++ R ITR GCKA + VK++ SG W V+K KE
Sbjct: 70 RDGTVVWRRLVCNKEGFRRSRPRRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKE 129
Query: 152 HNHELVP 158
HNH L+P
Sbjct: 130 HNHPLLP 136
Score = 93 (37.8 bits), Expect = 3.9e-34, Sum P(2) = 3.9e-34
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 700 DQDKKIQELTVELENASQRCEAYRTKLLAVLKDMEEEKTKMLVKVENV 747
++D KI+EL+ EL +RC A + +L VLK+MEE + + + +V
Sbjct: 153 EKDAKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSV 200
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 326 (119.8 bits), Expect = 8.9e-32, Sum P(2) = 8.9e-32
Identities = 65/143 (45%), Positives = 89/143 (62%)
Query: 16 DEMRNSNGEDDSERPSDYYDHVLPDNSRNFETLNGDPNLEPFEGMEFDSEQAARIFYNSY 75
D+ N GE+ E+ +P + GD EP+ G EF+SE AA FYN+Y
Sbjct: 33 DDNHNELGENSGEQDEKVDLDSIPLAVADMTEAQGD---EPYVGQEFESEAAAHGFYNAY 89
Query: 76 ARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRGSSENRSKRQRTITRVGCKAQMTV 135
A ++GF RVS RSR DGS I RQ+VC++EG+R S ++ RQR TRVGCKA + +
Sbjct: 90 ATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSKRDKVIRQRAETRVGCKAMILI 149
Query: 136 KKQGSGKWAVSKLIKEHNHELVP 158
+K+ SGKW ++K +KEHNH L+P
Sbjct: 150 RKENSGKWVITKFVKEHNHSLMP 172
Score = 56 (24.8 bits), Expect = 8.9e-32, Sum P(2) = 8.9e-32
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 685 NSLFSGCQQHHSCSVDQ----DKKIQELTVELENASQRCEAYRTKLLAVLKDMEEEKTKM 740
+SL G + C DQ KIQEL +L +R Y+ L + + +E+ +
Sbjct: 168 HSLMPG-RVRRGCIYDQYPNEHDKIQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESL 226
Query: 741 LVKVENV 747
+++++
Sbjct: 227 SKRIQHI 233
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 252 (93.8 bits), Expect = 2.8e-30, Sum P(2) = 2.8e-30
Identities = 57/130 (43%), Positives = 80/130 (61%)
Query: 41 NSRNFETLNGDPNLEPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICR 100
NS N + D +EP EG+ F+SE AA++FY+ Y+RR+GF RV +RS +DG I+ R
Sbjct: 11 NSNNTD----DFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILAR 66
Query: 101 QIVCSREGFR---RGSSENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELV 157
+ C++EG RG + ++ R TR GCKA + VK SGKW ++K +KEHNH LV
Sbjct: 67 RFGCNKEGHCVSIRGKFGS-VRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLV 125
Query: 158 --PPDKVHCL 165
P + H L
Sbjct: 126 VSPREARHTL 135
Score = 118 (46.6 bits), Expect = 2.8e-30, Sum P(2) = 2.8e-30
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 700 DQDKKIQELTVELENASQRCEAYRTKLLAVLKDMEEEKTKMLVKVENVRLDLK 752
++DK+IQELT+EL N + C AY+ +L A K +EE ++ KVENV +LK
Sbjct: 137 EKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLK 189
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 244 (91.0 bits), Expect = 8.5e-27, Sum P(2) = 8.5e-27
Identities = 47/110 (42%), Positives = 72/110 (65%)
Query: 48 LNGDPNL-EPFEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSR 106
+ GD L EP+ G++F+SE+ A+ FY Y++R+GF R+ +RS DG + R++ C++
Sbjct: 1 MTGDLKLDEPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNK 60
Query: 107 EGFRRGSSENRSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHEL 156
+GF G + RS + +R GCKA + VK + SGKW V++ IKEHNH L
Sbjct: 61 QGF--GPNNQRSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSL 108
Score = 93 (37.8 bits), Expect = 8.5e-27, Sum P(2) = 8.5e-27
Identities = 19/65 (29%), Positives = 41/65 (63%)
Query: 688 FSGCQQHHSCSVDQDKKIQELTVELENASQRCEAYRTKLLAVLKDMEEEKTKMLVKVENV 747
F G + S + D+++KI+ELT E+E + C+ YR +L++ + ++E ++ +KV ++
Sbjct: 110 FIGSSSYDSFA-DKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDI 168
Query: 748 RLDLK 752
++K
Sbjct: 169 VENVK 173
Score = 38 (18.4 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 372 EAQERLSDVYQ 382
E Q+RL DVY+
Sbjct: 134 ECQDRLCDVYR 144
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 753 743 0.00088 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 627 (67 KB)
Total size of DFA: 409 KB (2198 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.08u 0.20s 64.28t Elapsed: 00:00:03
Total cpu time: 64.09u 0.20s 64.29t Elapsed: 00:00:03
Start: Tue May 21 16:59:19 2013 End: Tue May 21 16:59:22 2013