Your job contains 1 sequence.
>004451
MSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA
QRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQ
TEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQL
RRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASE
LDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKP
PGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHS
VGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDI
AWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLP
MDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA
KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQ
ELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQ
ALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCT
MTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004451
(753 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2019848 - symbol:NUDT3 "nudix hydrolase homolo... 2947 3.8e-307 1
UNIPROTKB|Q486U4 - symbol:CPS_1178 "Putative uncharacteri... 658 1.2e-73 2
TIGR_CMR|CPS_1178 - symbol:CPS_1178 "lipoprotein, putativ... 658 1.2e-73 2
DICTYBASE|DDB_G0269784 - symbol:DDB_G0269784 "Uncharacter... 303 5.9e-26 1
TIGR_CMR|BA_1964 - symbol:BA_1964 "mutT/nudix family prot... 168 1.8e-11 1
TIGR_CMR|CBU_0607 - symbol:CBU_0607 "diphosphomevalonate ... 156 1.0e-07 1
ASPGD|ASPL0000061206 - symbol:AN0579 species:162425 "Emer... 140 1.4e-06 1
TIGR_CMR|SPO_0131 - symbol:SPO_0131 "isopentyl-diphosphat... 127 3.1e-06 1
POMBASE|SPBC106.15 - symbol:idi1 "isopentenyl-diphosphate... 133 4.9e-06 1
TAIR|locus:2171382 - symbol:IPP1 "isopentenyl diphosphate... 135 6.7e-06 1
TAIR|locus:2075412 - symbol:IPP2 "isopentenyl pyrophospha... 134 8.1e-06 1
UNIPROTKB|Q46822 - symbol:idi species:83333 "Escherichia ... 122 2.5e-05 1
UNIPROTKB|I3LDY2 - symbol:LOC100739304 "Uncharacterized p... 119 0.00040 1
UNIPROTKB|G4MT46 - symbol:MGG_07125 "Isopentenyl-diphosph... 117 0.00050 1
UNIPROTKB|Q13907 - symbol:IDI1 "Isopentenyl-diphosphate D... 115 0.00061 1
>TAIR|locus:2019848 [details] [associations]
symbol:NUDT3 "nudix hydrolase homolog 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM;IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008239
"dipeptidyl-peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA;ISS] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA;RCA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000086
InterPro:IPR015797 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005773
GO:GO:0046872 eggNOG:COG0494 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0016787 EMBL:AC010793 EMBL:AK117805 EMBL:AY056442
EMBL:AY120774 EMBL:BT000142 IPI:IPI00524923 IPI:IPI00535410
RefSeq:NP_565218.1 UniGene:At.21701 UniGene:At.48398
ProteinModelPortal:Q8L831 SMR:Q8L831 IntAct:Q8L831 PaxDb:Q8L831
PRIDE:Q8L831 ProMEX:Q8L831 EnsemblPlants:AT1G79690.1 GeneID:844308
KEGG:ath:AT1G79690 TAIR:At1g79690 HOGENOM:HOG000002707
InParanoid:Q8L831 OMA:FRSIRFG PhylomeDB:Q8L831 ProtClustDB:PLN02791
Genevestigator:Q8L831 GermOnline:AT1G79690 Uniprot:Q8L831
Length = 772
Score = 2947 (1042.5 bits), Expect = 3.8e-307, P = 3.8e-307
Identities = 555/750 (74%), Positives = 648/750 (86%)
Query: 3 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 62
EVHR GDYHR V+ WIF E+TQ+LLLQ R+D KDSWPG WDISSAGHISAGD+SL+SAQR
Sbjct: 24 EVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWPGQWDISSAGHISAGDTSLLSAQR 83
Query: 63 ELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 122
EL+EELG+ LPKDAFE +F FLQ+ V NDGKFINNEF DVYLVT L+PIPLEAFTLQ+ E
Sbjct: 84 ELEEELGVKLPKDAFEKIFVFLQECVTNDGKFINNEFNDVYLVTILHPIPLEAFTLQKEE 143
Query: 123 VSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQLRR 182
VSAVKY+ YEEY+N L+K+DP++VPYDVNG YG+LF+II QR + NT RSL+LQKQL+R
Sbjct: 144 VSAVKYVPYEEYRNFLSKEDPAYVPYDVNGEYGKLFDIIRQRCQVNTEARSLSLQKQLQR 203
Query: 183 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELD 242
Y+ V+L A+L LS+AD++AL L++KAA +MD+IFY QVW SNP LRDWLK+HA+AS+LD
Sbjct: 204 YSPVTLEAKLTELSEADQKALGLIVKAAKIMDDIFYEQVWNSNPALRDWLKDHANASKLD 263
Query: 243 KLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPG 302
KLKW Y+ INKSPWSSLDENEAFL+TADSAVKLLP ATK + GWKGLEY+A+FP+ KPPG
Sbjct: 264 KLKWDYFTINKSPWSSLDENEAFLSTADSAVKLLPGATKAIAGWKGLEYRAAFPVTKPPG 323
Query: 303 ANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVG 362
ANFYPPDMDKMEF LW + LTE+Q+ AT FF+VIKRRSE NLD+S H+ +T
Sbjct: 324 ANFYPPDMDKMEFTLWLNGLTEEQKHAATGFFSVIKRRSEANLDAS--DHLASSTKKLPD 381
Query: 363 SIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAW 422
S DLYS+PYSE Y +L +ASE L KAGD+ SSPSLK+LLHSKA+AFLSN YY+SDIAW
Sbjct: 382 SNSDLYSIPYSEIYRPFLKKASEFLQKAGDLVSSPSLKKLLHSKAEAFLSNEYYESDIAW 441
Query: 423 IELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMD 482
++LDS+LD+TIGPYETYED IFGYKATFE FIGIRDDKATA +KLFGDNL++LE NLP++
Sbjct: 442 MDLDSKLDITIGPYETYEDEIFGYKATFETFIGIRDDKATADLKLFGDNLKLLEDNLPLE 501
Query: 483 NAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKF 542
+ YKS DV AAPIRVIQLIYNSGDVKGPQTVA+NLPNDE+IVKDRGTSMVMLKNV EAKF
Sbjct: 502 SVYKSTDVSAAPIRVIQLIYNSGDVKGPQTVAYNLPNDEKIVKDRGTSMVMLKNVQEAKF 561
Query: 543 KNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQEL 602
++IL+PIA++ I KEQ+ LVDFDSFFTH ICHECCHGIGPH+ITLP G+ STVR ELQE+
Sbjct: 562 EHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHGIGPHTITLPGGQTSTVRKELQEV 621
Query: 603 HSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQAL 662
HSAMEEAKADIVGLWALKFLI + LL KS+V+SMYVSFLAGCFRS+RFGL E+HGKGQAL
Sbjct: 622 HSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVSFLAGCFRSIRFGLTEAHGKGQAL 681
Query: 663 QFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMT 722
QFN+L+EK AF+ H D TFSVDF K+EGAVESLS EILTIQ +GDK AA+LLL KYCT+T
Sbjct: 682 QFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEILTIQGKGDKNAATLLLNKYCTIT 741
Query: 723 QPLKVALQKLENVQVPVDIAPTFTAVNKLL 752
PLK AL+ LE V+VPVDI+PTF L+
Sbjct: 742 GPLKTALENLERVKVPVDISPTFPLAEALM 771
>UNIPROTKB|Q486U4 [details] [associations]
symbol:CPS_1178 "Putative uncharacterized protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR HOGENOM:HOG000002707
OMA:FRSIRFG RefSeq:YP_267921.1 STRING:Q486U4 GeneID:3518424
KEGG:cps:CPS_1178 PATRIC:21465605 eggNOG:bactNOG01271
ProtClustDB:CLSK932759 BioCyc:CPSY167879:GI48-1259-MONOMER
Uniprot:Q486U4
Length = 576
Score = 658 (236.7 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 141/378 (37%), Positives = 225/378 (59%)
Query: 367 LYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIEL- 425
L SVP+SE Y+ +TRA+ +L +A A L +A A ++ Y SD AW+++
Sbjct: 191 LMSVPFSEIYHDQMTRAAAILDEAAKFADDKEFANYLTMRAQALRTDEYQASDFAWMDMK 250
Query: 426 DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAY 485
++ +DV IGP E+YED ++GY+A FE+++ I+D + ++ + L L++ LP+ Y
Sbjct: 251 NNPIDVVIGPIESYEDQLYGYRAAFESYVLIKDLAWSEKLAKYAQFLPELQKGLPVGKKY 310
Query: 486 KSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK 543
K++ + A + +IY +G G +T+A NLPNDE + +GT + LKN AKF
Sbjct: 311 KAEVPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLKKGTRRLQLKNAMRAKFD 370
Query: 544 NILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELH 603
I+ PIAD I EQ++ V F FF + + HE HG+G + TL +G Q VR L+E
Sbjct: 371 AIMLPIADTLIVPEQRKNVTFTGFFANTMFHEVAHGLGIKN-TL-NG-QGPVRQALKEHA 427
Query: 604 SAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQ 663
SA+EE KADI+GL+ ++ L+ + + ++ Y +F+AG FRS+RFG +HGK ++
Sbjct: 428 SALEEGKADILGLYMIRQLLVKGAITDGTLEDYYTTFMAGIFRSIRFGASSAHGKANMVR 487
Query: 664 FNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQ 723
FN+ EK AF + +S++ DK+ A++SLS ILT+Q GD + L+++ + +
Sbjct: 488 FNYFQEKGAFSRNEQGLYSINVDKMTAAIDSLSELILTLQGNGDYQGVDSLVKESGVIGE 547
Query: 724 PLKVALQKLENVQVPVDI 741
L L +LE ++PVDI
Sbjct: 548 TLAADLARLEEAKIPVDI 565
Score = 104 (41.7 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 177 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 236
+++L Y V+L A+L+ LS K+ + L+I A+ +MD++F+ Q + + +L A
Sbjct: 64 EQRLNIYKEVTLTADLSHLSANQKQMVALLIDASKIMDDLFWQQAFSQDKA--SFL---A 118
Query: 237 DASELDKLKWMYYLINKSPWSSLDENEAFL---TTADSAVKLLP-DATK 281
S+L ++ IN PW L+ ++ FL TT + P D TK
Sbjct: 119 SISDLTVRRFAE--INYGPWDRLNGDKVFLSQTTTKAHGAEFYPADMTK 165
Score = 81 (33.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/101 (27%), Positives = 48/101 (47%)
Query: 299 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV-DAT 357
K GA FYP DM K EFE +S ++K+ ++V++R ++ L S I D
Sbjct: 152 KAHGAEFYPADMTKAEFE--QSEFSDKK-----GLYSVVRRDNDGKLMSVPFSEIYHDQM 204
Query: 358 NHSVGSIYDLYSVPYSEEYNSYLTRASELL----HKAGDMA 394
+ + + +E+ +YLT ++ L ++A D A
Sbjct: 205 TRAAAILDEAAKFADDKEFANYLTMRAQALRTDEYQASDFA 245
Score = 40 (19.1 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 90 NDGKFINNEFADVY 103
NDGK ++ F+++Y
Sbjct: 187 NDGKLMSVPFSEIY 200
>TIGR_CMR|CPS_1178 [details] [associations]
symbol:CPS_1178 "lipoprotein, putative" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000002707 OMA:FRSIRFG
RefSeq:YP_267921.1 STRING:Q486U4 GeneID:3518424 KEGG:cps:CPS_1178
PATRIC:21465605 eggNOG:bactNOG01271 ProtClustDB:CLSK932759
BioCyc:CPSY167879:GI48-1259-MONOMER Uniprot:Q486U4
Length = 576
Score = 658 (236.7 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 141/378 (37%), Positives = 225/378 (59%)
Query: 367 LYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIEL- 425
L SVP+SE Y+ +TRA+ +L +A A L +A A ++ Y SD AW+++
Sbjct: 191 LMSVPFSEIYHDQMTRAAAILDEAAKFADDKEFANYLTMRAQALRTDEYQASDFAWMDMK 250
Query: 426 DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAY 485
++ +DV IGP E+YED ++GY+A FE+++ I+D + ++ + L L++ LP+ Y
Sbjct: 251 NNPIDVVIGPIESYEDQLYGYRAAFESYVLIKDLAWSEKLAKYAQFLPELQKGLPVGKKY 310
Query: 486 KSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK 543
K++ + A + +IY +G G +T+A NLPNDE + +GT + LKN AKF
Sbjct: 311 KAEVPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLKKGTRRLQLKNAMRAKFD 370
Query: 544 NILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELH 603
I+ PIAD I EQ++ V F FF + + HE HG+G + TL +G Q VR L+E
Sbjct: 371 AIMLPIADTLIVPEQRKNVTFTGFFANTMFHEVAHGLGIKN-TL-NG-QGPVRQALKEHA 427
Query: 604 SAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQ 663
SA+EE KADI+GL+ ++ L+ + + ++ Y +F+AG FRS+RFG +HGK ++
Sbjct: 428 SALEEGKADILGLYMIRQLLVKGAITDGTLEDYYTTFMAGIFRSIRFGASSAHGKANMVR 487
Query: 664 FNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQ 723
FN+ EK AF + +S++ DK+ A++SLS ILT+Q GD + L+++ + +
Sbjct: 488 FNYFQEKGAFSRNEQGLYSINVDKMTAAIDSLSELILTLQGNGDYQGVDSLVKESGVIGE 547
Query: 724 PLKVALQKLENVQVPVDI 741
L L +LE ++PVDI
Sbjct: 548 TLAADLARLEEAKIPVDI 565
Score = 104 (41.7 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 177 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 236
+++L Y V+L A+L+ LS K+ + L+I A+ +MD++F+ Q + + +L A
Sbjct: 64 EQRLNIYKEVTLTADLSHLSANQKQMVALLIDASKIMDDLFWQQAFSQDKA--SFL---A 118
Query: 237 DASELDKLKWMYYLINKSPWSSLDENEAFL---TTADSAVKLLP-DATK 281
S+L ++ IN PW L+ ++ FL TT + P D TK
Sbjct: 119 SISDLTVRRFAE--INYGPWDRLNGDKVFLSQTTTKAHGAEFYPADMTK 165
Score = 81 (33.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/101 (27%), Positives = 48/101 (47%)
Query: 299 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV-DAT 357
K GA FYP DM K EFE +S ++K+ ++V++R ++ L S I D
Sbjct: 152 KAHGAEFYPADMTKAEFE--QSEFSDKK-----GLYSVVRRDNDGKLMSVPFSEIYHDQM 204
Query: 358 NHSVGSIYDLYSVPYSEEYNSYLTRASELL----HKAGDMA 394
+ + + +E+ +YLT ++ L ++A D A
Sbjct: 205 TRAAAILDEAAKFADDKEFANYLTMRAQALRTDEYQASDFA 245
Score = 40 (19.1 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 90 NDGKFINNEFADVY 103
NDGK ++ F+++Y
Sbjct: 187 NDGKLMSVPFSEIY 200
>DICTYBASE|DDB_G0269784 [details] [associations]
symbol:DDB_G0269784 "Uncharacterized Nudix hydrolase
yfcD" species:44689 "Dictyostelium discoideum" [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000086
InterPro:IPR015797 Pfam:PF00293 PROSITE:PS51462
dictyBase:DDB_G0269784 EMBL:AAFI02000005 eggNOG:COG0494
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 RefSeq:XP_646275.1
ProteinModelPortal:Q55D56 STRING:Q55D56 EnsemblProtists:DDB0190551
GeneID:8617231 KEGG:ddi:DDB_G0269784 InParanoid:Q55D56 OMA:LIQKRAA
Uniprot:Q55D56
Length = 201
Score = 303 (111.7 bits), Expect = 5.9e-26, P = 5.9e-26
Identities = 66/180 (36%), Positives = 109/180 (60%)
Query: 2 SEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQ 61
SE+H G +HR V+ WI +S +L+Q+RA K+S P MWDIS AGHI AG +S +A
Sbjct: 22 SEIHEKGLWHRVVHIWI-VDSNGMVLIQKRAAHKESNPSMWDISCAGHIEAGMNSKETAI 80
Query: 62 RELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQT 121
+EL EELG+ ++ E +F++ +++++N+GK+++ E DVYL+T +P+ L LQ
Sbjct: 81 KELFEELGLLYSQNDLELLFSYNKKSILNNGKYLDFEIPDVYLITLAHPLNLGTLNLQIE 140
Query: 122 EVSAVKYIAYEEYKNLLAKDDPSFVP-YDVNGG------YGQLFNIISQRYKENTMERSL 174
EVS K + E L+ +++ +F P YD + Y +LF +++++ T + L
Sbjct: 141 EVSDAKLVTPNELYQLITEENSTFAPLYDADDKPFKAHPYFKLFETLAEKFPTPTNKNLL 200
>TIGR_CMR|BA_1964 [details] [associations]
symbol:BA_1964 "mutT/nudix family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR000086 InterPro:IPR015797 PROSITE:PS51462 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 RefSeq:NP_844372.1
RefSeq:YP_018610.1 RefSeq:YP_028087.1 ProteinModelPortal:Q81RS4
DNASU:1083883 EnsemblBacteria:EBBACT00000011642
EnsemblBacteria:EBBACT00000015829 EnsemblBacteria:EBBACT00000024377
GeneID:1083883 GeneID:2817076 GeneID:2848236 KEGG:ban:BA_1964
KEGG:bar:GBAA_1964 KEGG:bat:BAS1823 HOGENOM:HOG000088253
OMA:IFKIDYE ProtClustDB:CLSK872891
BioCyc:BANT260799:GJAJ-1892-MONOMER
BioCyc:BANT261594:GJ7F-1967-MONOMER Uniprot:Q81RS4
Length = 202
Score = 168 (64.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 46/152 (30%), Positives = 75/152 (49%)
Query: 3 EVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSSLISA 60
EVHR G++H T + W + +++ L Q R+ K P +WDI+SAGHI + I
Sbjct: 22 EVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDVQIGG 81
Query: 61 QRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 118
RE++EELG++ A++ +FT + + N + EF +Y ++ +P F
Sbjct: 82 LREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDSLP---FAP 134
Query: 119 QQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 150
+ EV V + + LL K+ SF V
Sbjct: 135 GE-EVDDVMKVHATSFLQLLKKEISSFTAISV 165
>TIGR_CMR|CBU_0607 [details] [associations]
symbol:CBU_0607 "diphosphomevalonate decarboxylase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004163
"diphosphomevalonate decarboxylase activity" evidence=ISS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=ISS]
HAMAP:MF_00202 InterPro:IPR000086 InterPro:IPR005935
InterPro:IPR006204 InterPro:IPR011876 InterPro:IPR015797
Pfam:PF00288 Pfam:PF00293 PROSITE:PS51462 PANTHER:PTHR10977
GO:GO:0005524 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0008299
GO:GO:0004452 TIGRFAMs:TIGR02150 HSSP:Q46822 KO:K01597
GO:GO:0004163 TIGRFAMs:TIGR01240 OMA:NIALCKY RefSeq:NP_819637.1
ProteinModelPortal:Q83DT5 GeneID:1208492 KEGG:cbu:CBU_0607
PATRIC:17929901 HOGENOM:HOG000081924 ProtClustDB:CLSK914181
BioCyc:CBUR227377:GJ7S-605-MONOMER Uniprot:Q83DT5
Length = 503
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/150 (32%), Positives = 73/150 (48%)
Query: 3 EVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 60
+ HR G HR + +IF+ E LLLQ+R K G+W + H + + +
Sbjct: 352 KAHREGKLHRAFSVFIFSRKNNEWQLLLQQRHPEKYHSGGLWTNTCCSHPRPDEDIVTAG 411
Query: 61 QRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 119
+R L EE G+ +P K EF +T N + I NE+ V + T +A
Sbjct: 412 ERRLFEETGLKIPLKRVGEFHYTATVGN-----QLIENEYDHVLIGFT----DADAIDFN 462
Query: 120 QTEVSAVKYIAYEEYKNLLAKDDPS-FVPY 148
+ E+SAV++I E KN L K++PS F P+
Sbjct: 463 KKEISAVRWIRVSELKNEL-KENPSHFTPW 491
>ASPGD|ASPL0000061206 [details] [associations]
symbol:AN0579 species:162425 "Emericella nidulans"
[GO:0016125 "sterol metabolic process" evidence=RCA] [GO:0004452
"isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA;RCA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] InterPro:IPR000086 InterPro:IPR011876
InterPro:IPR015797 Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462
EMBL:BN001308 Gene3D:3.90.79.10 SUPFAM:SSF55811 EMBL:AACD01000007
GO:GO:0016787 GO:GO:0008299 HOGENOM:HOG000274106 KO:K01823
GO:GO:0004452 PANTHER:PTHR10885 TIGRFAMs:TIGR02150 OMA:YILFLQK
RefSeq:XP_658183.1 ProteinModelPortal:G5EB72 SMR:G5EB72
EnsemblFungi:CADANIAT00002098 GeneID:2876355 KEGG:ani:AN0579.2
Uniprot:G5EB72
Length = 268
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/163 (30%), Positives = 82/163 (50%)
Query: 1 MSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI-----SAG-- 53
M+ + R G HR + ++F +S LLLQ+RA K ++P MW + H G
Sbjct: 81 MTNIDR-GLLHRAFSVFLF-DSQNRLLLQQRASEKITFPDMWTNTCCSHPLGIPGETGSQ 138
Query: 54 -DSSLI----SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 105
D++++ +AQR+L ELGI +P + FEF FT + +DGK+ +E D Y++
Sbjct: 139 LDAAILGVKRAAQRKLNHELGIKPEEVPIEKFEF-FTRIHYKAPSDGKWGEHEI-D-YIL 195
Query: 106 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 148
+ LE EV +Y++ +E K + + + F P+
Sbjct: 196 FIQADVVLEP---NLNEVRDTRYVSADELKEMFKQTNLKFTPW 235
>TIGR_CMR|SPO_0131 [details] [associations]
symbol:SPO_0131 "isopentyl-diphosphate delta-isomerase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004452
"isopentenyl-diphosphate delta-isomerase activity" evidence=ISS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=ISS]
HAMAP:MF_00202 InterPro:IPR000086 InterPro:IPR011876
InterPro:IPR015797 Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462
UniPathway:UPA00059 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0016787 GO:GO:0008299 eggNOG:COG1443
KO:K01823 GO:GO:0004452 GO:GO:0050992 PANTHER:PTHR10885
TIGRFAMs:TIGR02150 HOGENOM:HOG000274107 RefSeq:YP_165403.1
ProteinModelPortal:Q5LWT6 GeneID:3194796 KEGG:sil:SPO0131
PATRIC:23373507 OMA:PGLWTNT ProtClustDB:CLSK933164 Uniprot:Q5LWT6
Length = 180
Score = 127 (49.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 39/146 (26%), Positives = 65/146 (44%)
Query: 3 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 62
E H G H+ V+ +FA ++L+QRRA K PG+W + H +S+ A R
Sbjct: 20 EAHEKGLKHKAVS--VFAVRDMDILIQRRALGKYHTPGLWANTCCTHPDWDESASTCAVR 77
Query: 63 ELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 122
L+EELGI + + + +G + NE DV+L P+ + E
Sbjct: 78 RLREELGITGLYPEYRHRLEYHAD--VGNG-MVENEVVDVFLAHVRGPLQVVP---NPDE 131
Query: 123 VSAVKYIAYEEYKNLLAKDDPSFVPY 148
V +++I Y + + + F P+
Sbjct: 132 VMEIRWIGYHDLLAEVQRYPERFTPW 157
>POMBASE|SPBC106.15 [details] [associations]
symbol:idi1 "isopentenyl-diphosphate delta-isomerase
Idi1" species:4896 "Schizosaccharomyces pombe" [GO:0004452
"isopentenyl-diphosphate delta-isomerase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006696 "ergosterol biosynthetic process"
evidence=ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000086
InterPro:IPR011876 InterPro:IPR015797 Pfam:PF00293
PIRSF:PIRSF018427 PROSITE:PS51462 UniPathway:UPA00059
PomBase:SPBC106.15 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
EMBL:CU329671 Gene3D:3.90.79.10 SUPFAM:SSF55811
GenomeReviews:CU329671_GR GO:GO:0016787 GO:GO:0006696 GO:GO:0008299
eggNOG:COG1443 HOGENOM:HOG000274106 GO:GO:0004452 GO:GO:0050992
PANTHER:PTHR10885 TIGRFAMs:TIGR02150 EMBL:U21154 PIR:A56442
RefSeq:NP_595164.2 STRING:Q10132 EnsemblFungi:SPBC106.15.1
GeneID:2540174 OrthoDB:EOG4RFQ2V NextBio:20801306 Uniprot:Q10132
Length = 229
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 49/163 (30%), Positives = 82/163 (50%)
Query: 1 MSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHIS--AGD--SS 56
M +++ G HR + +IF E + LLLQ+RA+ K ++P +W + H AG+ ++
Sbjct: 45 MENINK-GLLHRAFSMFIFDEQNR-LLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNT 102
Query: 57 LI--------SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 105
L +AQR+L ELGI +PKD F+F+ T + + G + +E D Y++
Sbjct: 103 LPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFL-TRIHYLAPSTGAWGEHEI-D-YIL 159
Query: 106 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 148
+ L+ + EV A KY+ EE K + + F P+
Sbjct: 160 FFKGKVELD---INPNEVQAYKYVTMEELKEMFSDPQYGFTPW 199
>TAIR|locus:2171382 [details] [associations]
symbol:IPP1 "isopentenyl diphosphate isomerase 1"
species:3702 "Arabidopsis thaliana" [GO:0004452
"isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA;IDA;IMP] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;TAS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009240 "isopentenyl diphosphate
biosynthetic process" evidence=IMP] [GO:0009536 "plastid"
evidence=IDA] [GO:0015995 "chlorophyll biosynthetic process"
evidence=TAS] InterPro:IPR000086 InterPro:IPR011876
InterPro:IPR015797 Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS00893
PROSITE:PS51462 UniPathway:UPA00059 UniPathway:UPA00668
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0046872 Gene3D:3.90.79.10 SUPFAM:SSF55811 EMBL:AB005242
GO:GO:0016787 GO:GO:0016114 GO:GO:0015979 GO:GO:0015995
EMBL:AY065053 EMBL:AY093749 EMBL:U47324 EMBL:U48961 IPI:IPI00524120
PIR:S71369 RefSeq:NP_197148.3 UniGene:At.24823
ProteinModelPortal:Q38929 SMR:Q38929 STRING:Q38929 PaxDb:Q38929
PRIDE:Q38929 EnsemblPlants:AT5G16440.1 GeneID:831505
KEGG:ath:AT5G16440 TAIR:At5g16440 eggNOG:COG1443
HOGENOM:HOG000274106 InParanoid:Q38929 KO:K01823 OMA:DAQQVEY
ProtClustDB:PLN02552 BioCyc:ARA:AT5G16440-MONOMER
BioCyc:MetaCyc:AT5G16440-MONOMER Genevestigator:Q38929
GermOnline:AT5G16440 GO:GO:0004452 GO:GO:0050992 GO:GO:0009240
PANTHER:PTHR10885 TIGRFAMs:TIGR02150 Uniprot:Q38929
Length = 291
Score = 135 (52.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 48/154 (31%), Positives = 79/154 (51%)
Query: 1 MSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI-- 58
M ++ HR + ++F S ELLLQ+R+ K ++P +W + H +S LI
Sbjct: 101 MEKIEAENLLHRAFSVFLF-NSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEE 159
Query: 59 -------SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTL 108
+AQR+L +ELGI ++P D F + L + +DGK+ +E D YL+ +
Sbjct: 160 NVLGVRNAAQRKLFDELGIVAEDVPVDEFTPLGRMLYK-APSDGKWGEHE-VD-YLLFIV 216
Query: 109 NPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 142
+ L+ EV+ +KY++ EE K L+ K D
Sbjct: 217 RDVKLQP---NPDEVAEIKYVSREELKELVKKAD 247
>TAIR|locus:2075412 [details] [associations]
symbol:IPP2 "isopentenyl pyrophosphate:dimethylallyl
pyrophosphate isomerase 2" species:3702 "Arabidopsis thaliana"
[GO:0004452 "isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;TAS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009908 "flower development" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009060 "aerobic respiration"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=TAS]
InterPro:IPR000086 InterPro:IPR011876 InterPro:IPR015797
Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS00893 PROSITE:PS51462
UniPathway:UPA00059 UniPathway:UPA00668 GO:GO:0005829 GO:GO:0005739
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 GO:GO:0016114
GO:GO:0009908 GO:GO:0015979 EMBL:AC018363 GO:GO:0015995
eggNOG:COG1443 HOGENOM:HOG000274106 KO:K01823 ProtClustDB:PLN02552
GO:GO:0004452 GO:GO:0050992 PANTHER:PTHR10885 TIGRFAMs:TIGR02150
EMBL:U49259 EMBL:AF428343 EMBL:AY127023 EMBL:AY143845
IPI:IPI00516444 PIR:S71370 RefSeq:NP_186927.1 UniGene:At.10819
ProteinModelPortal:Q42553 SMR:Q42553 IntAct:Q42553 STRING:Q42553
PaxDb:Q42553 PRIDE:Q42553 DNASU:820960 EnsemblPlants:AT3G02780.1
GeneID:820960 KEGG:ath:AT3G02780 TAIR:At3g02780 InParanoid:Q42553
OMA:EERCILV PhylomeDB:Q42553 BioCyc:ARA:AT3G02780-MONOMER
BioCyc:MetaCyc:AT3G02780-MONOMER Genevestigator:Q42553
GermOnline:AT3G02780 Uniprot:Q42553
Length = 284
Score = 134 (52.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 46/144 (31%), Positives = 77/144 (53%)
Query: 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI---------SAQ 61
HR + ++F S ELLLQ+R++ K ++P +W + H +S LI +AQ
Sbjct: 104 HRAFSVFLF-NSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQ 162
Query: 62 RELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 118
R+L +ELGI ++P D F + L + +DGK+ +E D YL+ + + ++
Sbjct: 163 RKLLDELGIVAEDVPVDEFTPLGRMLYK-APSDGKWGEHEL-D-YLLFIVRDVKVQP--- 216
Query: 119 QQTEVSAVKYIAYEEYKNLLAKDD 142
EV+ +KY++ EE K L+ K D
Sbjct: 217 NPDEVAEIKYVSREELKELVKKAD 240
>UNIPROTKB|Q46822 [details] [associations]
symbol:idi species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0050992
"dimethylallyl diphosphate biosynthetic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=IDA] [GO:0004452 "isopentenyl-diphosphate
delta-isomerase activity" evidence=IEA;IDA] HAMAP:MF_00202
InterPro:IPR000086 InterPro:IPR011876 InterPro:IPR015797
Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462 UniPathway:UPA00059
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0006974 GO:GO:0006744 GO:GO:0016787
EMBL:U28375 GO:GO:0008299 eggNOG:COG1443 KO:K01823 GO:GO:0004452
GO:GO:0050992 PANTHER:PTHR10885 TIGRFAMs:TIGR02150 EMBL:AF119715
PIR:A65073 RefSeq:NP_417365.1 RefSeq:YP_491090.1 PDB:1HX3 PDB:1HZT
PDB:1I9A PDB:1NFS PDB:1NFZ PDB:1OW2 PDB:1PPV PDB:1PPW PDB:1PVF
PDB:1Q54 PDB:1R67 PDB:1X83 PDB:1X84 PDB:2B2K PDB:2G73 PDB:2G74
PDB:2VNP PDB:2VNQ PDBsum:1HX3 PDBsum:1HZT PDBsum:1I9A PDBsum:1NFS
PDBsum:1NFZ PDBsum:1OW2 PDBsum:1PPV PDBsum:1PPW PDBsum:1PVF
PDBsum:1Q54 PDBsum:1R67 PDBsum:1X83 PDBsum:1X84 PDBsum:2B2K
PDBsum:2G73 PDBsum:2G74 PDBsum:2VNP PDBsum:2VNQ
ProteinModelPortal:Q46822 SMR:Q46822 IntAct:Q46822
EnsemblBacteria:EBESCT00000003483 EnsemblBacteria:EBESCT00000017993
GeneID:12930440 GeneID:949020 KEGG:ecj:Y75_p2821 KEGG:eco:b2889
PATRIC:32121188 EchoBASE:EB2883 EcoGene:EG13072
HOGENOM:HOG000274107 OMA:SKKTWPG ProtClustDB:PRK03759
BioCyc:EcoCyc:IPPISOM-MONOMER BioCyc:ECOL316407:JW2857-MONOMER
BioCyc:MetaCyc:IPPISOM-MONOMER SABIO-RK:Q46822
EvolutionaryTrace:Q46822 Genevestigator:Q46822 Uniprot:Q46822
Length = 182
Score = 122 (48.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 70
H ++W+F Q LL+ RRA K +WPG+W S GH G+S+ + R + ELG+
Sbjct: 32 HLAFSSWLFNAKGQ-LLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGV 90
Query: 71 NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 113
+ E ++ + + + NE V+ T + + +
Sbjct: 91 EITPP--ESIYPDFRYRATDPSGIVENEVCPVFAARTTSALQI 131
>UNIPROTKB|I3LDY2 [details] [associations]
symbol:LOC100739304 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004452 "isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA] InterPro:IPR000086 InterPro:IPR011876
InterPro:IPR015797 Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 GO:GO:0008299
GO:GO:0004452 PANTHER:PTHR10885 TIGRFAMs:TIGR02150
GeneTree:ENSGT00390000008527 OMA:YILFLQK EMBL:FP340182
EMBL:FP565895 Ensembl:ENSSSCT00000024912 Ensembl:ENSSSCT00000025266
Uniprot:I3LDY2
Length = 287
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 45/155 (29%), Positives = 78/155 (50%)
Query: 1 MSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWD-------ISSAGHISAG 53
++E + G HR + ++F + +LLLQ+R+D K ++PG + +S+ G +
Sbjct: 101 LNENIKKGLLHRAFSVFLF-NTENKLLLQQRSDAKITFPGCFSNACCSHPLSTPGELEEN 159
Query: 54 DSSLI--SAQRELQEELGINL---PKDAFEFVFTFLQQNVINDGKFINNEFADVYLV--- 105
D+ + +AQR L+ ELGI L P + ++ T + +DG + +E + L+
Sbjct: 160 DAIGVRRAAQRRLKAELGIPLEEVPPEEINYL-TRIYYKAQSDGIWGEHEIDYILLMKKD 218
Query: 106 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 140
TLNP P E+ + Y++ EE K LL K
Sbjct: 219 VTLNPDP--------NEIKSHCYVSQEELKELLRK 245
>UNIPROTKB|G4MT46 [details] [associations]
symbol:MGG_07125 "Isopentenyl-diphosphate Delta-isomerase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000086
InterPro:IPR011876 InterPro:IPR015797 Pfam:PF00293
PIRSF:PIRSF018427 PROSITE:PS51462 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CM001232 GO:GO:0008299 KO:K01823 GO:GO:0004452
PANTHER:PTHR10885 TIGRFAMs:TIGR02150 RefSeq:XP_003715318.1
ProteinModelPortal:G4MT46 SMR:G4MT46 EnsemblFungi:MGG_07125T0
GeneID:2683247 KEGG:mgr:MGG_07125 Uniprot:G4MT46
Length = 254
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 1 MSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA--GDS--- 55
M+ + + G HR + ++F + ELLLQ+RA K ++P MW + H G++
Sbjct: 67 MTNIEK-GLLHRAFSVFLFNDKN-ELLLQQRATEKITFPDMWTNTCCSHPLGIPGETGSN 124
Query: 56 ---SLI----SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 105
S++ +AQR+L ELGI +P + F F+ T + +DGK+ +E D L
Sbjct: 125 LPDSIMGVKRAAQRKLDHELGIKKEQVPLENFHFL-TRIHYKAPSDGKWGEHE-VDYILF 182
Query: 106 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 148
N + L+ + + EV A +Y + + K F P+
Sbjct: 183 IKAN-VDLD---INKNEVQATQYTSADGLKAFFKDPAAKFTPW 221
>UNIPROTKB|Q13907 [details] [associations]
symbol:IDI1 "Isopentenyl-diphosphate Delta-isomerase 1"
species:9606 "Homo sapiens" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0004452 "isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA;IDA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0035634 "response to stilbenoid" evidence=IEA] [GO:0050992
"dimethylallyl diphosphate biosynthetic process" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0030145 "manganese ion binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006695
"cholesterol biosynthetic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000086 InterPro:IPR011876 InterPro:IPR015797
Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462 UniPathway:UPA00059
GO:GO:0005829 GO:GO:0005739 GO:GO:0005777 GO:GO:0035634
GO:GO:0000287 GO:GO:0046872 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0006695 GO:GO:0016787 EMBL:CH471072 GO:GO:0030145
GO:GO:0008299 eggNOG:COG1443 KO:K01823 GO:GO:0004452 GO:GO:0050992
PANTHER:PTHR10885 TIGRFAMs:TIGR02150 CTD:3422 HOVERGEN:HBG002995
OrthoDB:EOG4PK28T EMBL:X17025 EMBL:AF291755 EMBL:AF271720
EMBL:AF271724 EMBL:AF271721 EMBL:AF271722 EMBL:AF271723
EMBL:BT006761 EMBL:AK303669 EMBL:AC022536 EMBL:BC005247
EMBL:BC006999 EMBL:BC019227 EMBL:BC022418 EMBL:BC025375
EMBL:BC057827 EMBL:BC107893 EMBL:AK222875 IPI:IPI00220014
IPI:IPI00645307 RefSeq:NP_004499.2 UniGene:Hs.741176 PDB:2DHO
PDB:2I6K PDB:2ICJ PDB:2ICK PDBsum:2DHO PDBsum:2I6K PDBsum:2ICJ
PDBsum:2ICK ProteinModelPortal:Q13907 SMR:Q13907 IntAct:Q13907
STRING:Q13907 PhosphoSite:Q13907 DMDM:6225527 PaxDb:Q13907
PRIDE:Q13907 DNASU:3422 Ensembl:ENST00000381344 GeneID:3422
KEGG:hsa:3422 UCSC:uc001ifz.3 GeneCards:GC10M001075
H-InvDB:HIX0008588 HGNC:HGNC:5387 HPA:HPA039169 MIM:604055
neXtProt:NX_Q13907 PharmGKB:PA29635 InParanoid:Q13907 OMA:YILFLQK
BioCyc:MetaCyc:HS00895-MONOMER BRENDA:5.3.3.2 SABIO-RK:Q13907
EvolutionaryTrace:Q13907 GenomeRNAi:3422 NextBio:13496
ArrayExpress:Q13907 Bgee:Q13907 CleanEx:HS_IDI1
Genevestigator:Q13907 GermOnline:ENSG00000067064 Uniprot:Q13907
Length = 227
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 44/148 (29%), Positives = 73/148 (49%)
Query: 8 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWD-------ISSAGHISAGDSSLI-- 58
G HR + ++F + +LLLQ+R+D K ++PG + +S+ + D+ +
Sbjct: 48 GLLHRAFSVFLF-NTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRR 106
Query: 59 SAQRELQEELGINL---PKDAFEFVFTFLQQNVINDGKFINNEFADVYLV---TTLNPIP 112
+AQR L+ ELGI L P + ++ T + +DG + +E + LV TLNP P
Sbjct: 107 AAQRRLKAELGIPLEEVPPEEINYL-TRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDP 165
Query: 113 LEAFTLQQTEVSAVKYIAYEEYKNLLAK 140
E+ + Y++ EE K LL K
Sbjct: 166 --------NEIKSYCYVSKEELKELLKK 185
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 753 753 0.00090 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 628 (67 KB)
Total size of DFA: 387 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.99u 0.12s 66.11t Elapsed: 00:00:03
Total cpu time: 65.99u 0.12s 66.11t Elapsed: 00:00:03
Start: Tue May 21 17:02:24 2013 End: Tue May 21 17:02:27 2013