Query 004451
Match_columns 753
No_of_seqs 327 out of 2072
Neff 6.8
Searched_HMMs 29240
Date Tue Mar 26 01:36:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004451.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004451hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fvy_A Dipeptidyl-peptidase 3; 100.0 3E-138 1E-142 1190.2 38.1 553 183-752 16-681 (728)
2 3csk_A Probable dipeptidyl-pep 100.0 2E-134 7E-139 1151.6 43.3 552 185-753 14-685 (711)
3 3dup_A MUTT/nudix family prote 99.8 6.8E-20 2.3E-24 194.9 17.7 170 2-182 109-284 (300)
4 2dho_A Isopentenyl-diphosphate 99.8 7.5E-20 2.6E-24 189.0 17.4 136 6-148 54-204 (235)
5 2pny_A Isopentenyl-diphosphate 99.8 7E-20 2.4E-24 190.5 17.0 136 6-148 65-215 (246)
6 2fb1_A Conserved hypothetical 99.8 2.1E-19 7.2E-24 184.6 9.7 157 10-204 12-170 (226)
7 1hzt_A Isopentenyl diphosphate 99.8 7.4E-19 2.5E-23 174.9 13.4 138 2-148 22-161 (190)
8 3gz5_A MUTT/nudix family prote 99.8 4.6E-19 1.6E-23 183.7 12.2 158 10-205 21-184 (240)
9 2fml_A MUTT/nudix family prote 99.8 2.2E-18 7.4E-23 182.0 14.4 174 10-204 38-224 (273)
10 2fkb_A Putative nudix hydrolas 99.7 1.9E-16 6.5E-21 155.6 15.0 123 3-139 29-151 (180)
11 1q27_A Putative nudix hydrolas 99.7 2E-16 6.7E-21 154.2 14.4 117 11-141 34-152 (171)
12 3i7u_A AP4A hydrolase; nudix p 99.7 2.1E-16 7.3E-21 148.8 13.6 110 11-138 4-113 (134)
13 1sjy_A MUTT/nudix family prote 99.7 2.2E-15 7.6E-20 144.3 17.4 126 4-141 6-134 (159)
14 3grn_A MUTT related protein; s 99.6 3E-15 1E-19 143.1 16.3 115 8-137 5-119 (153)
15 3eds_A MUTT/nudix family prote 99.6 2.7E-16 9.3E-21 150.8 7.0 124 4-142 14-140 (153)
16 1rya_A GDP-mannose mannosyl hy 99.6 4.2E-15 1.4E-19 142.6 15.1 120 10-137 17-138 (160)
17 3oga_A Nucleoside triphosphata 99.6 4.5E-15 1.5E-19 143.7 15.0 123 8-137 24-149 (165)
18 1ktg_A Diadenosine tetraphosph 99.6 1E-14 3.4E-19 136.4 16.7 115 10-139 2-120 (138)
19 3r03_A Nudix hydrolase; struct 99.6 4.2E-15 1.4E-19 140.0 13.6 115 9-138 6-120 (144)
20 3i9x_A MUTT/nudix family prote 99.6 1E-15 3.5E-20 151.9 9.5 121 7-136 23-154 (187)
21 2o1c_A DATP pyrophosphohydrola 99.6 1.1E-14 3.7E-19 137.6 15.2 124 1-138 1-133 (150)
22 3u53_A BIS(5'-nucleosyl)-tetra 99.6 1.3E-14 4.4E-19 139.4 15.6 116 12-139 4-127 (155)
23 2pbt_A AP4A hydrolase; nudix p 99.6 1.4E-14 4.7E-19 134.6 14.8 110 11-138 4-113 (134)
24 3gwy_A Putative CTP pyrophosph 99.6 1.2E-14 4.1E-19 136.8 13.8 110 11-137 6-116 (140)
25 3shd_A Phosphatase NUDJ; nudix 99.6 1.1E-14 3.8E-19 138.8 13.4 109 10-134 4-112 (153)
26 4dyw_A MUTT/nudix family prote 99.6 8.2E-15 2.8E-19 141.1 12.4 114 9-136 27-140 (157)
27 3hhj_A Mutator MUTT protein; n 99.6 1.1E-14 3.7E-19 140.0 12.9 113 10-137 28-140 (158)
28 1vcd_A NDX1; nudix protein, di 99.6 2.8E-14 9.7E-19 131.2 14.9 106 12-138 3-108 (126)
29 3fcm_A Hydrolase, nudix family 99.6 2.7E-14 9.4E-19 142.8 15.9 123 8-139 42-169 (197)
30 3gg6_A Nudix motif 18, nucleos 99.6 9.5E-15 3.2E-19 139.9 11.6 115 9-139 18-132 (156)
31 1f3y_A Diadenosine 5',5'''-P1, 99.6 8.6E-15 2.9E-19 140.8 10.8 123 6-139 9-147 (165)
32 3exq_A Nudix family hydrolase; 99.6 9.5E-15 3.3E-19 141.3 11.1 116 6-137 5-121 (161)
33 2b0v_A Nudix hydrolase; struct 99.6 3.4E-14 1.2E-18 135.1 14.0 113 11-137 8-120 (153)
34 3son_A Hypothetical nudix hydr 99.6 7.1E-14 2.4E-18 132.8 16.1 116 12-139 6-126 (149)
35 3ees_A Probable pyrophosphohyd 99.5 2.9E-14 1E-18 135.2 12.9 110 11-137 21-130 (153)
36 2rrk_A ORF135, CTP pyrophospho 99.5 4.7E-14 1.6E-18 132.0 13.9 112 9-137 6-117 (140)
37 2yyh_A MUTT domain, 8-OXO-DGTP 99.5 4.3E-14 1.5E-18 132.7 12.6 116 1-135 1-119 (139)
38 3f6a_A Hydrolase, nudix family 99.5 2E-14 6.7E-19 138.4 10.1 114 9-137 4-133 (159)
39 2w4e_A MUTT/nudix family prote 99.5 1.9E-14 6.4E-19 136.8 9.5 116 12-141 6-121 (145)
40 2azw_A MUTT/nudix family prote 99.5 6E-14 2E-18 132.5 12.6 116 10-139 17-132 (148)
41 1v8y_A ADP-ribose pyrophosphat 99.5 5.6E-14 1.9E-18 137.0 12.2 114 12-141 35-148 (170)
42 1nqz_A COA pyrophosphatase (MU 99.5 5.2E-14 1.8E-18 140.2 11.8 116 8-137 32-151 (194)
43 2kdv_A RNA pyrophosphohydrolas 99.5 1.2E-13 4.1E-18 134.3 14.1 118 9-137 6-135 (164)
44 3q93_A 7,8-dihydro-8-oxoguanin 99.5 5.9E-14 2E-18 138.0 11.9 111 11-137 24-134 (176)
45 2pqv_A MUTT/nudix family prote 99.5 6.2E-14 2.1E-18 133.9 11.4 113 9-137 17-129 (154)
46 2fvv_A Diphosphoinositol polyp 99.5 3.2E-14 1.1E-18 142.5 9.7 113 12-141 41-154 (194)
47 2b06_A MUTT/nudix family prote 99.5 4.2E-14 1.4E-18 135.1 10.0 112 8-138 5-120 (155)
48 3h95_A Nucleoside diphosphate- 99.5 1.3E-13 4.5E-18 138.2 13.9 117 11-139 26-142 (199)
49 3id9_A MUTT/nudix family prote 99.5 1.1E-13 3.9E-18 134.6 12.8 117 7-138 19-136 (171)
50 2yvp_A NDX2, MUTT/nudix family 99.5 3.4E-14 1.2E-18 139.9 7.6 117 12-141 42-158 (182)
51 3q1p_A Phosphohydrolase (MUTT/ 99.5 1.4E-13 4.7E-18 138.9 11.1 114 10-139 67-180 (205)
52 3q91_A Uridine diphosphate glu 99.5 1.2E-13 4.1E-18 140.9 9.7 124 11-141 36-192 (218)
53 3e57_A Uncharacterized protein 99.4 6.4E-14 2.2E-18 141.8 7.1 122 4-139 60-190 (211)
54 1g0s_A Hypothetical 23.7 kDa p 99.4 4.6E-13 1.6E-17 135.6 12.9 122 11-141 57-183 (209)
55 3o6z_A GDP-mannose pyrophospha 99.4 3.7E-13 1.3E-17 134.2 11.9 120 11-141 45-170 (191)
56 1vk6_A NADH pyrophosphatase; 1 99.4 4.3E-13 1.5E-17 141.0 12.8 105 13-137 142-246 (269)
57 3o8s_A Nudix hydrolase, ADP-ri 99.4 2.8E-13 9.7E-18 136.7 11.0 112 11-139 70-181 (206)
58 3fk9_A Mutator MUTT protein; s 99.4 4.4E-13 1.5E-17 133.4 12.1 111 11-137 4-114 (188)
59 3cng_A Nudix hydrolase; struct 99.4 6.4E-13 2.2E-17 132.0 12.9 105 11-135 40-144 (189)
60 1vhz_A ADP compounds hydrolase 99.4 2.9E-13 1E-17 135.9 10.1 115 12-141 50-164 (198)
61 2qjt_B Nicotinamide-nucleotide 99.4 1.1E-12 3.6E-17 142.6 15.0 118 10-137 207-329 (352)
62 1mut_A MUTT, nucleoside tripho 99.4 3.1E-14 1.1E-18 131.1 2.3 109 11-137 5-113 (129)
63 1mk1_A ADPR pyrophosphatase; n 99.4 3.3E-13 1.1E-17 136.3 10.0 118 12-141 44-162 (207)
64 2jvb_A Protein PSU1, mRNA-deca 99.4 4.3E-13 1.5E-17 126.8 9.7 113 12-141 5-118 (146)
65 2qjo_A Bifunctional NMN adenyl 99.4 7.1E-13 2.4E-17 143.2 11.8 117 10-137 202-322 (341)
66 1k2e_A Nudix homolog; nudix/MU 99.4 8.8E-13 3E-17 126.6 9.9 103 12-137 2-119 (156)
67 3f13_A Putative nudix hydrolas 99.4 3.5E-12 1.2E-16 124.1 13.4 96 10-132 15-110 (163)
68 1x51_A A/G-specific adenine DN 99.3 2.9E-12 9.8E-17 122.7 9.7 109 13-137 21-133 (155)
69 2a6t_A SPAC19A8.12; alpha/beta 99.3 1.4E-12 4.9E-17 137.3 7.8 113 12-140 102-215 (271)
70 2dsc_A ADP-sugar pyrophosphata 99.3 9.4E-12 3.2E-16 126.0 10.5 106 24-139 77-185 (212)
71 3fjy_A Probable MUTT1 protein; 99.2 6.6E-11 2.3E-15 129.6 13.0 109 23-139 37-160 (364)
72 1u20_A U8 snoRNA-binding prote 99.2 1.3E-11 4.5E-16 125.2 5.5 101 22-136 54-164 (212)
73 1q33_A Pyrophosphatase, ADP-ri 99.2 6.5E-11 2.2E-15 125.9 10.3 109 25-139 140-264 (292)
74 3qsj_A Nudix hydrolase; struct 99.1 2.5E-10 8.6E-15 117.3 13.5 123 12-143 9-194 (232)
75 3fsp_A A/G-specific adenine gl 99.1 1.3E-10 4.4E-15 127.6 8.8 105 12-137 241-345 (369)
76 2xsq_A U8 snoRNA-decapping enz 98.9 9.8E-10 3.4E-14 111.9 4.8 100 24-135 65-171 (217)
77 3rh7_A Hypothetical oxidoreduc 98.5 1.2E-07 4E-12 101.9 7.1 93 11-137 183-276 (321)
78 3kvh_A Protein syndesmos; NUDT 98.4 1.4E-07 4.9E-12 92.5 5.5 83 10-108 20-114 (214)
79 3bho_A Cleavage and polyadenyl 98.1 4.9E-06 1.7E-10 82.7 8.8 56 7-70 55-112 (208)
80 2ovx_A Matrix metalloproteinas 68.3 0.96 3.3E-05 43.0 -0.3 17 568-584 111-127 (159)
81 1cge_A Fibroblast collagenase; 65.8 1.2 4E-05 42.8 -0.3 17 568-584 111-127 (168)
82 2xs4_A Karilysin protease; hyd 65.8 1 3.5E-05 43.0 -0.6 18 567-584 114-131 (167)
83 2jsd_A Matrix metalloproteinas 65.0 1.1 3.7E-05 42.4 -0.6 17 568-584 108-124 (160)
84 1hy7_A Stromelysin-1, MMP-3; m 63.7 1.2 4.1E-05 42.9 -0.6 17 568-584 113-129 (173)
85 1hv5_A Stromelysin 3; inhibiti 61.3 1.6 5.3E-05 41.7 -0.3 18 567-584 112-129 (165)
86 1slm_A Stromelysin-1; hydrolas 55.4 2.3 7.8E-05 43.7 -0.3 17 568-584 195-211 (255)
87 1i76_A MMP-8;, neutrophil coll 52.0 2.5 8.4E-05 40.3 -0.6 17 568-584 112-128 (163)
88 3ayu_A 72 kDa type IV collagen 51.0 2.9 0.0001 39.9 -0.3 16 568-583 114-129 (167)
89 1y93_A Macrophage metalloelast 48.8 3.3 0.00011 39.2 -0.3 17 568-584 108-124 (159)
90 3p1v_A Metallo-endopeptidase; 44.5 5 0.00017 43.7 0.3 16 567-582 286-301 (407)
91 2y6d_A Matrilysin; hydrolase; 43.0 4.1 0.00014 39.2 -0.6 16 568-583 115-130 (174)
92 830c_A MMP-13, MMP-13; matrix 42.7 4.7 0.00016 38.6 -0.3 16 568-583 113-128 (168)
93 1rm8_A MMP-16, matrix metallop 40.9 4.7 0.00016 38.5 -0.6 17 568-584 117-133 (169)
94 1sat_A Serratia protease; para 40.0 5 0.00017 44.8 -0.6 16 569-584 171-186 (471)
95 1kap_P Alkaline protease; calc 39.4 5.2 0.00018 44.8 -0.6 16 569-584 180-195 (479)
96 2jvf_A De novo protein M7; tet 39.3 43 0.0015 27.2 4.9 48 364-411 15-73 (96)
97 2w15_A Zinc metalloproteinase 38.9 5.9 0.0002 38.8 -0.3 16 568-583 136-151 (202)
98 1g9k_A Serralysin; beta jelly 38.1 5.6 0.00019 44.4 -0.6 16 569-584 164-179 (463)
99 1kuf_A Atrolysin E, metallopro 37.3 6.4 0.00022 38.6 -0.3 15 568-582 138-152 (203)
100 3ma2_D Matrix metalloproteinas 37.1 6.5 0.00022 38.1 -0.3 17 568-584 122-138 (181)
101 1k7i_A PROC, secreted protease 37.0 6 0.00021 44.3 -0.6 16 569-584 183-198 (479)
102 2ddf_A ADAM 17; hydrolase; HET 36.3 6.9 0.00023 39.8 -0.3 15 568-582 182-196 (257)
103 1atl_A Atrolysin C; metalloend 35.8 6.9 0.00024 38.3 -0.3 15 569-583 137-151 (202)
104 1qua_A Acutolysin-C, hemorrhag 35.4 7.1 0.00024 38.0 -0.3 15 568-582 135-149 (197)
105 1bud_A Protein (acutolysin A); 35.2 7.2 0.00025 38.0 -0.3 16 568-583 133-148 (197)
106 3b8z_A Protein adamts-5; alpha 35.0 7.6 0.00026 38.4 -0.2 14 569-582 142-155 (217)
107 1yp1_A FII; FII hydrolase; 1.9 34.8 7.4 0.00025 38.1 -0.3 14 569-582 136-149 (202)
108 1l6j_A Matrix metalloproteinas 33.3 8.3 0.00028 42.4 -0.3 17 568-584 376-392 (425)
109 3nxq_A Angiotensin-converting 33.2 42 0.0014 38.8 5.5 55 570-631 357-414 (629)
110 4dd8_A Disintegrin and metallo 33.2 8.2 0.00028 38.0 -0.3 14 569-582 134-147 (208)
111 2v4b_A Adamts-1; zymogen, prot 30.7 9.8 0.00034 39.6 -0.2 15 568-582 143-157 (300)
112 2rjp_A Adamts-4; metalloprotea 29.6 10 0.00035 39.8 -0.3 15 568-582 143-157 (316)
113 1r55_A ADAM 33; metalloproteas 29.6 11 0.00036 37.4 -0.2 14 569-582 137-150 (214)
114 2i47_A ADAM 17; TACE-inhibitor 29.5 10 0.00035 39.2 -0.3 15 568-582 188-202 (288)
115 1c7k_A NCNP, zinc endoprotease 28.9 9.4 0.00032 35.1 -0.6 14 569-582 78-91 (132)
116 3ba0_A Macrophage metalloelast 28.2 10 0.00035 40.8 -0.6 17 568-584 107-123 (365)
117 2rjq_A Adamts-5; metalloprotea 27.5 12 0.00041 40.4 -0.3 16 568-583 143-158 (378)
118 1eak_A 72 kDa type IV collagen 27.0 12 0.00042 41.0 -0.3 16 569-584 367-382 (421)
119 3lqb_A Hatching enzyme, LOC792 25.7 12 0.00043 36.7 -0.5 19 568-586 93-111 (199)
120 3edh_A Bone morphogenetic prot 24.8 13 0.00046 36.5 -0.5 19 568-586 87-105 (201)
121 3k7n_A K-like; SVMP, hydrolase 24.0 15 0.00051 40.0 -0.3 15 568-582 139-153 (397)
122 4axq_A Archaemetzincin; metall 23.7 15 0.00052 35.0 -0.3 16 568-583 114-129 (163)
123 2e3x_A Coagulation factor X-ac 23.7 18 0.0006 39.9 0.2 15 569-583 140-154 (427)
124 1su3_A Interstitial collagenas 23.5 16 0.00054 40.6 -0.3 17 568-584 193-209 (450)
125 3k7l_A Atragin; SVMP, metallop 22.9 16 0.00056 40.1 -0.3 15 568-582 144-158 (422)
126 2ero_A VAP-1, vascular apoptos 22.5 17 0.00057 40.0 -0.3 15 569-583 147-161 (427)
127 2dw0_A Catrocollastatin; apopt 21.8 18 0.00061 39.7 -0.3 15 569-583 138-152 (419)
No 1
>3fvy_A Dipeptidyl-peptidase 3; SGC, DPP3, alternative splicing, aminopeptidase, cytoplasm, hydrolase, metal-binding, metalloprotease, phosphoprotein; 1.90A {Homo sapiens} PDB: 3t6b_A 3t6j_A
Probab=100.00 E-value=3e-138 Score=1190.23 Aligned_cols=553 Identities=18% Similarity=0.224 Sum_probs=471.5
Q ss_pred hhccccchhhcCCCHHHHHHHHHHHHHhhhccceeeeccCCCCHHHHHHHHhhhcc---cchhHH--------------H
Q 004451 183 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADA---SELDKL--------------K 245 (753)
Q Consensus 183 ~~pv~~~~~f~~Lt~~Ek~yl~~l~~Aa~~g~~I~~~Q~s~e~~~i~~~l~~~~~~---~~~~~~--------------~ 245 (753)
...+.|+..|+.||++||+|+||||||||+|++|+++|+||||+.||++|+.+|.. ++|+.+ .
T Consensus 16 i~~L~~~~~F~~Lt~keK~Yah~ls~Aa~~G~~I~l~Q~s~es~~I~~ll~~i~~~~~~~~~~~~~~~~~~~~~e~~~fl 95 (728)
T 3fvy_A 16 VSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIYALLSRLFRAQDPDQLHQHALAEGLTEEEYQAFL 95 (728)
T ss_dssp EEECCCHHHHHTSCHHHHHHHHHHHHHHHHHHTHHHHTTCSSHHHHHHHHHHHHHHSCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eEEEehHHhHhhCCHHHHHHHHHHHHHHHcCCCEEEEeCCcccHHHHHHHHHHHHhCCchhHHHHHHhcCCCHHHHHHHH
Confidence 34577899999999999999999999999999999999999999999999999941 144432 1
Q ss_pred --HHHhhccCCC---CCC----CCCCHHHHHHHHhhcccCCCCCCCccccccccccccCCCC-------CC-CC-CccCC
Q 004451 246 --WMYYLINKSP---WSS----LDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLP-------KP-PG-ANFYP 307 (753)
Q Consensus 246 --~~~~~~n~g~---~~~----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-------~~-~g-s~yYp 307 (753)
...|+.|.|| |++ |++++++|.++++++++.....+.+..+|+.+++.||++. .| .| |||||
T Consensus 96 ~Y~~~f~~n~Gny~~fGd~KfiP~~s~~~f~~l~~~s~~~~~~~~~~~~l~~~~~~~if~~~~~~~~lg~~~~g~s~YY~ 175 (728)
T 3fvy_A 96 VYAAGVYSNMGNYKSFGDTKFVPNLPKEKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFS 175 (728)
T ss_dssp HHHHHHHHHTSSBCTTTCBBCCCSSCHHHHHHHHHHSHHHHHSHHHHHHHHHHHHHHHHCCCGGGSBBCSGGGCBCSSBC
T ss_pred HHHHHHHhccCCccCCCCCCcCCCCCHHHHHHHHHhCchhhccchhHHHHHHHhhHHhccCCcccccCCCCCCCccCCCC
Confidence 1123334454 444 9999999999997664322112245678889999999942 33 24 99999
Q ss_pred CCCCHHHHHHHHhhhchhhhhcccccceeEeecC--CCc-----ccCCCcCCcccCC---CC---ccccCCcEEEEeecc
Q 004451 308 PDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS--EFN-----LDSSLSGHIVDAT---NH---SVGSIYDLYSVPYSE 374 (753)
Q Consensus 308 ~~it~~e~~~~~~~~~~~~~~~~~~~~t~~~k~~--~~~-----~~~~~~~~~~~~~---~~---~~~~~g~~~~~~y~g 374 (753)
++||++|+++++++| +++++.++||||+|.. ++. ++||+.+...... .. ....+|..+.+.| |
T Consensus 176 ~~iT~~eie~v~~~~---~~~~i~~~NTRl~K~~~~~g~~~~~i~~AS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 251 (728)
T 3fvy_A 176 GNCTMEDAKLAQDFL---DSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFRGSPFQVTR-G 251 (728)
T ss_dssp TTCCHHHHHHHHHHH---HHTTCCSTTEEEEEEECTTCCEEEEEEEECSSCCC----CTTGGGCSEEEETTEEEEEEE-E
T ss_pred CCCCHHHHHHHHHHH---HhCCCchhcceEEEEecCCCcceEEEEEEeecccCCccccccccccccccccCceeeecC-C
Confidence 999999999999999 6788999999999983 331 5677653221100 00 1113477788888 9
Q ss_pred ccHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHcccCc---cchhcHhhhcc-CCeeeeeecccccccccccCccccc
Q 004451 375 EYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATF 450 (753)
Q Consensus 375 ~y~~~l~~v~~~L~~A~~~a~n~~q~~~L~~~~~~f~tg~---~~~s~~~Wv~d-~~~ve~~iGfiE~Y~Dp~~g~ra~~ 450 (753)
||+++|++||.+|++|++||+|++|++||.+||+||+||| |++||++||+| +|+||++||||||||||+ |+||||
T Consensus 252 dy~~~l~ki~~~L~kA~~~A~N~~qk~~L~~yi~~F~TGdl~~~k~s~~~WvkD~~p~VE~~iGFIEtYrDP~-G~Rae~ 330 (728)
T 3fvy_A 252 DYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFIESYRDPF-GSRGEF 330 (728)
T ss_dssp ETHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSCSCSEEEEEEEEECSSSTT-SCSCEE
T ss_pred chHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCceeeeecCceecCCCC-CCceeE
Confidence 9999999999999999999999999999999999999996 58899999999 999999999999999996 999999
Q ss_pred eeeEEeeCHHHHHHHHHHhhcHHHHHHhCCCCcccccCCCCCCCcceeeeeeccCCCCCCcceeecCCCchHHHhhccce
Q 004451 451 EAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTS 530 (753)
Q Consensus 451 E~~V~i~d~~~s~~~~~l~~~a~~~~~~lPw~~~~ek~~~~~pd~~~~~vl~~~g~~~~~~~~giNlPN~~~ir~~~G~K 530 (753)
||||+|+|+++|+||++|+++||+|+++|||+++|||++|.+||||||+||+||||+ +|||||||||||||+++|||
T Consensus 331 EgfVai~d~e~T~kl~~lv~~a~~~~~~LPw~~~feKd~f~~pdftsl~vl~~aGsg---~p~GINLPNyd~IR~~~GfK 407 (728)
T 3fvy_A 331 EGFVAVVNKAMSAKFERLVASAEQLLKELPWPPTFEKDKFLTPDFTSLDVLTFAGSG---IPAGINIPNYDDLRQTEGFK 407 (728)
T ss_dssp EEEEEECCHHHHHHHHHHHHTHHHHHHTSSSCGGGSCSSCCCCCCCEEEEEEEESSC---CCSEEEECCCHHHHHHTCCE
T ss_pred EEEEEEeCHHHHHHHHHHHHHHHHHHHhCCCCchhccCccCCCCceEEEeHhhcCCC---CccceeCCChHHHHHhcCee
Confidence 999999999999999999999999999999999999999999999999999999998 59999999999999999999
Q ss_pred eEEecchhhhhhccccccccccccCHhhHhhhccc---ccchhhhhhhc-ccCcCCCCcccCC---------------c-
Q 004451 531 MVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFD---SFFTHNICHEC-CHGIGPHSITLPD---------------G- 590 (753)
Q Consensus 531 nv~l~Nv~~a~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~v~lHEl-gHgsGk~~~~~~~---------------g- 590 (753)
||+|+|||+|++.....++ .||+++|++++.+| +|++||+|||| ||||||++...++ |
T Consensus 408 nVsLgNvl~A~~~~~~~~i--~fi~~~~~~l~~k~~~~af~~~v~lHElLGHGsGkll~~~~~G~~NFD~~~~~~p~tg~ 485 (728)
T 3fvy_A 408 NVSLGNVLAVAYATQREKL--TFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPETGE 485 (728)
T ss_dssp EEEEHHHHTTSSCCSGGGC--TTBCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCBBCTTSCBSSCTTTCBCTTTSS
T ss_pred EEEeeeehhhhhcccccCC--CccCHHHHHHHHHhccchHhHHHHHHHhccCcCCcccccCCCCccccccccCCCCCCCC
Confidence 9999999999864322222 59999999999876 99999999999 9999997652211 1
Q ss_pred -------ccccccchhhcccchHHhHHHHHHHHHHH--HHHHh-CCCCCchhhhHHHHHHHHH---HHhhhccC------
Q 004451 591 -------RQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIG-RDLLPKSLVKSMYVSFLAG---CFRSVRFG------ 651 (753)
Q Consensus 591 -------~~~t~~~~f~~~~s~~EEcRAe~vglyl~--~~ll~-~g~~~~~~~~~~y~~~l~~---~~~~l~f~------ 651 (753)
+|+||+++||+++||+||||||||||||| ++|++ ||+.+.++++++|++||+| ++++|+|+
T Consensus 486 ~i~swY~pgeT~~s~fg~~ast~EEcRAdlvgLYl~~~~~lleifG~~~~~a~d~~Y~~~L~~~~~Gl~~l~f~~p~~~~ 565 (728)
T 3fvy_A 486 QIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAGLLALEFYTPEAFN 565 (728)
T ss_dssp BCCCCBCTTCCHHHHSTTTHHHHHHHHHHHHHHHHTTCHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHGGGGEEGGGTE
T ss_pred cceeeccCCCcHHHHHhcccchHHHHHHHHHHHHHcCCHHHHHHcCCCccchhhhHHHHHHHHHHHhhheeeeecCCCCc
Confidence 58999999999999999999999999999 77999 6998667899999999986 55788883
Q ss_pred ccchhHhHHHHHHHHHhhcCC-eE---Ec--cC----CcEEEeHhhHH----HHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 004451 652 LEESHGKGQALQFNWLFEKEA-FI---LH--SD----DTFSVDFDKVE----GAVESLSTEILTIQARGDKEAASLLLQK 717 (753)
Q Consensus 652 ~~qaH~~ar~~i~~~~~~~g~-~~---~~--~~----g~~~vD~~ki~----~av~~ll~~l~~~ks~gD~~a~~~~~e~ 717 (753)
|+||||||||+|+|||+++|. ++ .+ ++ ++++|||+||+ +||++||++||+||||||+++|++||++
T Consensus 566 w~qAH~qar~~il~~lle~G~~~v~~~~~~~~~g~~~~~i~vD~sKi~~~g~~avg~lL~~l~~~KstgD~~aa~~l~e~ 645 (728)
T 3fvy_A 566 WRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEG 645 (728)
T ss_dssp ESCHHHHHHHHHHHHHHHTCTTSEEEEEEECTTSSEEEEEEECGGGTTTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHcCCCeEEEEEecccCCCCcEEEEeeHHHHhhhhHHHHHHHHHHHHeeeecCCHHHHHHHHHh
Confidence 999999999999999999996 43 22 13 35789999994 6999999999999999999999999999
Q ss_pred hcCCCHH-------HH-HHHHhhhccCCCCccccccccccccc
Q 004451 718 YCTMTQP-------LK-VALQKLENVQVPVDIAPTFTAVNKLL 752 (753)
Q Consensus 718 ~~~v~~~-------~~-~~l~r~~~~~~p~~i~~~f~~~~~~~ 752 (753)
|++|+++ |+ +||+|++ | |++|||+||+|
T Consensus 646 y~~v~~~~~~~~~~~r~iVl~rk~----P---rk~FVQ~nt~l 681 (728)
T 3fvy_A 646 YATVTDAPPECFLTLRDTVLLRKE----S---RKLIVQPNTRL 681 (728)
T ss_dssp HTCCCCCTTTCHHHHHHHHHHTCC----C---CCEEECCEEEE
T ss_pred ccccCcccchhHHHHHHHHHhccC----C---CceeecCcEEE
Confidence 9998864 77 7999887 8 89999999987
No 2
>3csk_A Probable dipeptidyl-peptidase 3; Zn-hydrolase, aminodipeptidase, hexxgh-motif, aminopeptidase hydrolase, metal-binding, metalloprotease; 1.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-134 Score=1151.61 Aligned_cols=552 Identities=17% Similarity=0.225 Sum_probs=467.0
Q ss_pred ccccc-hhhcCCCHHHHHHHHHHHHHhhhccceeeeccCCCCHHHHHHHHhhhc--ccc-----------hhHHH--HHH
Q 004451 185 HVSLN-AELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHAD--ASE-----------LDKLK--WMY 248 (753)
Q Consensus 185 pv~~~-~~f~~Lt~~Ek~yl~~l~~Aa~~g~~I~~~Q~s~e~~~i~~~l~~~~~--~~~-----------~~~~~--~~~ 248 (753)
.+.|+ ..|+.||.+||+|+||||||||+|++|+++|+||||+.||++|+.+|. .++ |+++. ...
T Consensus 14 ~l~~~~~~F~~Lt~keK~yahyls~As~~G~~I~~~Q~spes~~I~~ll~~i~~~~~~~~~~~~g~~~~e~~~~l~Y~~~ 93 (711)
T 3csk_A 14 MLSVKTEYFPQLTDKEQKYAHFMSKASHAGSRVVMRQVSHESEPIFDLILAIHSKLNGKYPEDDITQKQQTGLYLEYVSQ 93 (711)
T ss_dssp ECCCTTTTGGGSCHHHHHHHHHHHHHHHTTHHHHHHHHCTTHHHHHHHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHH
T ss_pred EEEechHhhhhCCHHHHHHHHHHHHHHhcCCceeEeecCcCcHHHHHHHHHHHHhcCcchhhhcCCCHHHHHHHHHHHHH
Confidence 45566 889999999999999999999999999999999999999999999993 223 44442 122
Q ss_pred hh---ccCCCCCC----CCCCHHHHHH---HHhhccc-CCCCC--------CCc----cccccccccccCCCC-------
Q 004451 249 YL---INKSPWSS----LDENEAFLTT---ADSAVKL-LPDAT--------KPV----NGWKGLEYKASFPLP------- 298 (753)
Q Consensus 249 ~~---~n~g~~~~----p~~~~~~~~~---~~~~~~~-~~~~~--------~~~----~~~~~~~~~~i~~~~------- 298 (753)
++ +||.+|++ |++++++|++ ++++++. ++-.. ..+ +.+++.+.+.||++.
T Consensus 94 f~~n~Gny~~fGd~KfiP~~~~e~f~~~l~lv~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~if~~~~~~~~lg 173 (711)
T 3csk_A 94 FLSNLGNFKSFGDTKFIPRCEVKFFKQLLELAKINPSSSPLTLSPVDVNHEFTSHHLFSTINELIDIGIYHVEEKAALLG 173 (711)
T ss_dssp HHHHTSSBCTTTCBBCBCSSCHHHHHHHHHHTTCCTTSCGGGGSCTTSCGGGSSGGGCSSHHHHHHTTTTCCCTTTTBBS
T ss_pred HHhccCCcccCCcccccCCCCHHHHHHHHHHHHhCchhhhhhhccccccccchhhhhhhhhHhhhcCceecCCcchhhcC
Confidence 33 44455555 9999999999 6643321 11000 111 233347889999953
Q ss_pred CCC-C--CccCCC-CCCHHHHHHH-HhhhchhhhhcccccceeEeecCCCc---ccCCC-cCCc-c--cCCCCc-cccCC
Q 004451 299 KPP-G--ANFYPP-DMDKMEFELW-KSSLTEKQQEDATSFFTVIKRRSEFN---LDSSL-SGHI-V--DATNHS-VGSIY 365 (753)
Q Consensus 299 ~~~-g--s~yYp~-~it~~e~~~~-~~~~~~~~~~~~~~~~t~~~k~~~~~---~~~~~-~~~~-~--~~~~~~-~~~~g 365 (753)
+|+ | |||||+ +||++|++.+ +++| +.++++++||||+|..+.. ++||+ .+.+ + +..... ...+|
T Consensus 174 ~~~~g~~s~YY~~~~iT~~eie~~~~~~~---~~~~~~p~NtRl~K~~~~~~ei~~AS~~~~~~~~~~~~~~~~~~~~~g 250 (711)
T 3csk_A 174 FPSQGYTSAYYLGLPVTPEDMALLKEQLF---AELAILPENTRINKVGENSFQIWVASENVKNQITETYPSGQITLSNAV 250 (711)
T ss_dssp CGGGTCBCTTEEESCCCHHHHHHHHHHTH---HHHTCCCTTEEEEEEETTEEEEEEECSCSSCCCTTTSCCSEEECTTSC
T ss_pred CCCCCceeecCCCCCCCHHHHHHHHHHhh---hhcCCcccceeEEecCCCeEEEEEeeccccCCccccccccccccccCC
Confidence 222 4 899987 8999999999 9999 6789999999999987553 56776 3222 1 111110 01357
Q ss_pred cEEEEeeccccHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHcccC---ccchhcHhhhcc-CCeeeeeecccccccc
Q 004451 366 DLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSN---NYYDSDIAWIEL-DSELDVTIGPYETYED 441 (753)
Q Consensus 366 ~~~~~~y~g~y~~~l~~v~~~L~~A~~~a~n~~q~~~L~~~~~~f~tg---~~~~s~~~Wv~d-~~~ve~~iGfiE~Y~D 441 (753)
..+.+.| |||+++|++||.+|++|++||+|++|++||.+||+||+|| +|++||++||+| +|+||++|||||||||
T Consensus 251 ~~v~~~~-Gdy~~~l~ki~~~L~kA~~~a~N~~q~~~L~~~i~~F~TGsl~~~~~s~~~WvkD~~p~VE~~iGFiEtY~D 329 (711)
T 3csk_A 251 TKVEFIF-GDHSREMRLVASYLKEAQKFAANDTQKAMLQEYINHFVTGSSQAHKEAQKLWVKDISPVIETNIGFIETYRE 329 (711)
T ss_dssp CEEEEEE-EETHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCSCSEEEEEEEEECSSS
T ss_pred ceEEEec-CchHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhccCCceEEeecCceeccC
Confidence 7788888 9999999999999999999999999999999999999999 599999999999 9999999999999999
Q ss_pred cccCccccceeeEEeeCHHHHHHHHHHhhcHHHHHHhCCCCcccccCCCCCCCcceeeeeeccCCCCCCcceeecCCCch
Q 004451 442 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 521 (753)
Q Consensus 442 p~~g~ra~~E~~V~i~d~~~s~~~~~l~~~a~~~~~~lPw~~~~ek~~~~~pd~~~~~vl~~~g~~~~~~~~giNlPN~~ 521 (753)
|+ |+||||||||+|+|+++|+||++|+++||+|+++|||+++|||++|.+|||||||||+||||+ +|+||||||||
T Consensus 330 P~-G~Rae~EgfVai~d~e~s~k~~~lv~~a~~~~~~LPw~~~fekd~f~~pdftsl~vl~~aGsg---~p~GINLPN~d 405 (711)
T 3csk_A 330 PS-GIIGEFESLVAIQNKERTAKFSSLVNNAEEFISLLPWSKDYEKPIFNPPDFTSLEVLTFTGSG---IPAGINIPNYD 405 (711)
T ss_dssp TT-SCSCEEEEEEEECCHHHHHHHHHHHHTHHHHHHHSSSCGGGSCSSCCCCCCCEEEEEEEESSC---CCSEEEECCCH
T ss_pred CC-CCceeeEEEEEEeCHHHHHHHHHHHHHHHHHHHhCCCChhhcccccCCCCceeeehhhhcCCC---ccceeECCCcH
Confidence 95 999999999999999999999999999999999999999999999999999999999999997 69999999999
Q ss_pred HHHhhccceeEEecchhhhhhccc-cccccccccCHhhHhhhccc---ccchhhhhhhc-ccCcCCCCcccCC-------
Q 004451 522 RIVKDRGTSMVMLKNVSEAKFKNI-LRPIADVCIRKEQQELVDFD---SFFTHNICHEC-CHGIGPHSITLPD------- 589 (753)
Q Consensus 522 ~ir~~~G~Knv~l~Nv~~a~~~~~-~~~~~~~~i~~~~~~~~~~~---~~~~~v~lHEl-gHgsGk~~~~~~~------- 589 (753)
|||+++|||||+|+|||+|+.+.. ..|+ .||+++|++++.+| +|++||+|||| ||||||++....+
T Consensus 406 ~IR~~~G~KnVsLgNv~~A~~~~~~~~~i--~fi~~~~~~~~~ky~~~af~~~v~lHElLGHGsGkl~~~~~~g~NFd~~ 483 (711)
T 3csk_A 406 DVRLKIGFKNVSLGNILSAAAKSSSKHPP--SFISQEDRPIFEKYQSDSFEVQVDIHELLGHGSGKLLTEFTDGFNFDKE 483 (711)
T ss_dssp HHHHHTCCEEEEEHHHHHHHHHTCCSSCC--TTBCTTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCBEETTEESSCSS
T ss_pred HHHHhcCeeEEEEeeeeccccccccCCcc--eeeCHHHHHHHHHhccccHhhhHhHHHhccccccccccccCCCcccccc
Confidence 999999999999999999983221 2344 59999999999876 89999999999 9999997643211
Q ss_pred -------c--------ccccccchhhcccchHHhHHHHHHHHHHH--HHHHh-CCCCCc-hhhhHHHHHHHHH---HHhh
Q 004451 590 -------G--------RQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIG-RDLLPK-SLVKSMYVSFLAG---CFRS 647 (753)
Q Consensus 590 -------g--------~~~t~~~~f~~~~s~~EEcRAe~vglyl~--~~ll~-~g~~~~-~~~~~~y~~~l~~---~~~~ 647 (753)
| +|+||+++||+++|||||||||||||||| +++++ ||+.++ ++++++|++||+| ++++
T Consensus 484 ~~~~~ltg~~i~twY~pG~T~~s~fg~~ast~EEcRAdlvgLYl~~d~~~leifG~~~~~~~~~~~Y~~yL~m~~aGl~s 563 (711)
T 3csk_A 484 NPPLGLDGKPVSTYYKVGETWGSKFGQLAGPFEECRAEVIAMFLLTNKKILDIFGFHDVESQDKVIYAGYLQMARAGLLA 563 (711)
T ss_dssp SCCBCTTSSBCCCCBCTTCCHHHHHGGGHHHHHHHHHHHHHHHHTTCHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred ccccccCCCccceecCCCCcHHHHHhhhhhhHHHHHHHHHHHHHhcCccHHHHcCCCchhhHHHHHHHHHHHHHHhhcce
Confidence 1 68999999999999999999999999999 78999 999884 5889999999865 6788
Q ss_pred hccC------ccchhHhHHHHHHHHHhhcCC---eE---EccCC---cEEEeHhhH----HHHHHHHHHHHHHHHhcCCH
Q 004451 648 VRFG------LEESHGKGQALQFNWLFEKEA---FI---LHSDD---TFSVDFDKV----EGAVESLSTEILTIQARGDK 708 (753)
Q Consensus 648 l~f~------~~qaH~~ar~~i~~~~~~~g~---~~---~~~~g---~~~vD~~ki----~~av~~ll~~l~~~ks~gD~ 708 (753)
|+|+ |+||||||||+|+|||+++|. ++ .+++| ++++||+|| ++|||+||++||+||||||+
T Consensus 564 L~f~~p~~~kw~qAH~~ar~~il~~lle~G~~~~~v~i~~~~~g~~~~i~~D~sKi~~~g~~avg~lL~~lq~~KstgD~ 643 (711)
T 3csk_A 564 LEYWNPKTGKWGQPHMQARFSIMKTFMKHSTDKNFLKLEMNSTNDDFAIKLDKSLIKTAGHECVKDYLKHLHVYKCSGDV 643 (711)
T ss_dssp GGGBCTTTCCBSCHHHHHHHHHHHHHHHSSSSTTSEEEEECTTSSCEEEEECGGGTTTHHHHHHHHHHHHHHHHHHTTCH
T ss_pred EEEECCCCCccchhhHHHHHHHHHHHHHcCCCCceEEEEEcCCCCeEEEEecHHHHHhhHHHHHHHHHHHHHhhhhccCH
Confidence 8883 999999999999999999984 33 23355 468899999 66999999999999999999
Q ss_pred HHHHHHHHHhcCCCH---HHH-HHHHhhhccCCCCcccccccccccccC
Q 004451 709 EAASLLLQKYCTMTQ---PLK-VALQKLENVQVPVDIAPTFTAVNKLLQ 753 (753)
Q Consensus 709 ~a~~~~~e~~~~v~~---~~~-~~l~r~~~~~~p~~i~~~f~~~~~~~~ 753 (753)
++|++||++|+.||+ +|| +||+|++ | |+.|||+||+|.
T Consensus 644 ~aa~~l~e~y~~Vd~~~~~lr~~Vl~rk~----P---rk~FVqpnt~l~ 685 (711)
T 3csk_A 644 EQGSKYFIDRSTVTPDLASLRDIVLSKRL----P---RRQFIQSNSYID 685 (711)
T ss_dssp HHHHHHHHHHTCCCHHHHTTHHHHHHTCC----C---CCEEECCEEEEC
T ss_pred HHHHHHHHHhccCCHHHHHHHHHHHhccC----C---cceeEcceEEEc
Confidence 999999999999998 677 8999886 9 889999999874
No 3
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.83 E-value=6.8e-20 Score=194.91 Aligned_cols=170 Identities=15% Similarity=0.020 Sum_probs=137.2
Q ss_pred ccccccCCceEEEEEEEEecCCC---EEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCC-Cce
Q 004451 2 SEVHRVGDYHRTVNAWIFAESTQ---ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPK-DAF 77 (753)
Q Consensus 2 ~~vh~~g~~h~aV~v~V~~~~~g---~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~-~~L 77 (753)
+.+|..|..|++|++.+++ .++ ++||+||+..|..+||+|+..|||++++||++.+||+||+.||+|++... ..+
T Consensus 109 ~~~~~~G~~~~~vh~~~~~-~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l 187 (300)
T 3dup_A 109 AVVPTFGVRAYGVHLNGYV-GAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQA 187 (300)
T ss_dssp GGTGGGTCCEEEEEEEEEE-SCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTC
T ss_pred hhccccceEEEEEEEEEEE-ecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhc
Confidence 5789999999999999999 556 99999999999999999998789999999999999999999999998542 246
Q ss_pred EEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcCCCCcccCCCCCchhHH
Q 004451 78 EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQL 157 (753)
Q Consensus 78 ~~l~~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~~~~~~pw~~~~~~~~~ 157 (753)
..++++.|....+.| ..+++.++|.+.++.+.. +.++++|+++++|++++|+.+++.+ +..|+||+. ..+
T Consensus 188 ~~~g~i~y~~~~~~G--~~~E~~~vy~~~l~~~~~---p~~~~~EV~~~~~v~~~El~~~l~~-pg~F~p~~~----lV~ 257 (300)
T 3dup_A 188 IPVGAITYCMESPAG--IKPDTLFLYDLALPEDFR---PHNTDGEMADFMLWPAAKVVEAVRT-TEAFKFNVN----LTV 257 (300)
T ss_dssp EEEEEEEEEEEETTE--EEEEEEEEEEEECCTTCC---CCCTTSSEEEEEEEEHHHHHHHHHH-CCCBCTTHH----HHH
T ss_pred cccceEEEEEecCCC--eEEEEEEEEEEEecCCCc---CCCCchHhheEEEECHHHHHHHHhc-CCCcCccHH----HHH
Confidence 677777776554544 467788899887654432 3678899999999999999999987 689999954 367
Q ss_pred HHHHHHH--hhhhhhhhhHHHHHHHhh
Q 004451 158 FNIISQR--YKENTMERSLTLQKQLRR 182 (753)
Q Consensus 158 f~~i~~~--~~~~~~~~~lell~r~~~ 182 (753)
.+++.++ +.+.....+.++.+++.+
T Consensus 258 ldfl~RhG~i~~~~~~~y~~i~~~l~r 284 (300)
T 3dup_A 258 IDFAIRHGLIDPDNEPDYQEILAGLRG 284 (300)
T ss_dssp HHHHHHTTSSCTTTSTTHHHHHHHTBC
T ss_pred HHHHHHhCCcCCccCCCHHHHHHHhcc
Confidence 7777764 334446677777776643
No 4
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.83 E-value=7.5e-20 Score=189.03 Aligned_cols=136 Identities=26% Similarity=0.442 Sum_probs=113.0
Q ss_pred ccCCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCC------CC---HHHHHHHHHHHHHCCccC---
Q 004451 6 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAG------DS---SLISAQRELQEELGINLP--- 73 (753)
Q Consensus 6 ~~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~g------Es---~~~AA~REl~EEtGl~v~--- 73 (753)
.+|.+|++|+|+|++ .+|+|||+||+..|..+||+|++|+||++++| |+ +.+||+||++||||+++.
T Consensus 54 ~~g~~h~av~v~v~~-~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~ 132 (235)
T 2dho_A 54 EKGLLHRAFSVFLFN-TENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVP 132 (235)
T ss_dssp TTTCCEEEEEEEEEC-TTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSC
T ss_pred CCCceEEEEEEEEEc-CCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccC
Confidence 789999999999998 68899999999988899999999988999999 88 599999999999999854
Q ss_pred CCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhc---CCCCcccC
Q 004451 74 KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK---DDPSFVPY 148 (753)
Q Consensus 74 ~~~L~~l~~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~---~~~~~~pw 148 (753)
...+..++++.|..... +.+..++++++|.+..+. .+.++++|+.+++|++++++.+++.+ ++..|+||
T Consensus 133 ~~~l~~l~~~~y~~~~~-~~~~~~e~~~vf~~~~~~-----~~~~~~~Ev~~~~wv~~~el~~~l~~~~~~~~~ftp~ 204 (235)
T 2dho_A 133 PEEINYLTRIHYKAQSD-GIWGEHEIDYILLVRMNV-----TLNPDPNEIKSYCYVSKEELKELLKKAASGEIKITPW 204 (235)
T ss_dssp GGGSEEEEEEEEEEECS-SSBEEEEEEEEEEEECCC-----CCCCCTTTEEEEEEECHHHHHHHHHHHHTTSSCBCHH
T ss_pred hhhcEEEEEEEEeccCC-CccceeEEEEEEEEEECC-----CCcCChHHEEEEEEEcHHHHHHHHhhccCCCcEECHh
Confidence 22477888887765432 334567888999887532 24567789999999999999999877 55689998
No 5
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.83 E-value=7e-20 Score=190.46 Aligned_cols=136 Identities=24% Similarity=0.394 Sum_probs=113.4
Q ss_pred ccCCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCC------CCH---HHHHHHHHHHHHCCccCC--
Q 004451 6 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAG------DSS---LISAQRELQEELGINLPK-- 74 (753)
Q Consensus 6 ~~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~g------Es~---~~AA~REl~EEtGl~v~~-- 74 (753)
.+|.+|+++.|+|++ .+|+|||+||+..|..+||+|++|+||++++| |++ .+||+||++||||+++..
T Consensus 65 ~~g~~h~av~v~v~~-~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~ 143 (246)
T 2pny_A 65 EKGLLHRAFSVVLFN-TKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQIS 143 (246)
T ss_dssp TTTCCEEEEEEEEEC-TTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCC
T ss_pred CCCcEEEEEEEEEEe-CCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccC
Confidence 789999999999998 68899999999988899999999988999999 887 999999999999998542
Q ss_pred -CceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhc---CCCCcccC
Q 004451 75 -DAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK---DDPSFVPY 148 (753)
Q Consensus 75 -~~L~~l~~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~---~~~~~~pw 148 (753)
..+..++.+.|..... +.+..++++++|.+..+. ++.++++|+.+++|++++|+.+++.. ++..|+||
T Consensus 144 ~~~l~~l~~~~y~~~~~-~~~~~~e~~~vf~~~~~~-----~~~~~~~Ev~~~~wv~~eel~~~l~~~~~~~~~ftp~ 215 (246)
T 2pny_A 144 PEDIVFMTIYHHKAKSD-RIWGEHEICYLLLVRKNV-----TLNPDPSETKSILYLSQEELWELLEREARGEVKVTPW 215 (246)
T ss_dssp GGGSEEEEEEEEEEESS-SSBEEEEEEEEEEEECCC-----CCCCCTTTEEEEEEECHHHHHHHHHHHHHTSSCBCHH
T ss_pred ccccEEEEEEEEEecCC-CceeeeEEEEEEEEEECC-----CCCCChHHeeEEEEEeHHHHHHHHHhccCCCceECHh
Confidence 2467888887765432 334567888999887532 24577789999999999999999877 55689998
No 6
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.78 E-value=2.1e-19 Score=184.60 Aligned_cols=157 Identities=16% Similarity=0.176 Sum_probs=123.2
Q ss_pred ceEEEEEEEEec--CCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeee
Q 004451 10 YHRTVNAWIFAE--STQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 87 (753)
Q Consensus 10 ~h~aV~v~V~~~--~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~ 87 (753)
.+.+|+++|+.. ++++|||++|.. .+++|.|.+| ||++++|||+.+||+||+.||||+++. .+.+++++....
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~--~~~~g~w~lP-GG~ve~gEs~~~Aa~REl~EEtGl~~~--~~~~l~~~~~~~ 86 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNF--EPAMGEWSLM-GGFVQKDESVDDAAKRVLAELTGLENV--YMEQVGAFGAID 86 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSS--SSSTTCEECE-EEECCTTSCHHHHHHHHHHHHHCCCSC--EEEEEEEECCTT
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcC--CCCCCCEECC-eeccCCCCCHHHHHHHHHHHHHCCCCC--ceEEEEEeCCCC
Confidence 478899999832 456999999966 3578999999 999999999999999999999999953 578888886544
Q ss_pred ecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcCCCCcccCCCCCchhHHHHHHHHHhhh
Q 004451 88 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKE 167 (753)
Q Consensus 88 ~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~~~~~~pw~~~~~~~~~f~~i~~~~~~ 167 (753)
+.++ .+.+.++|++.+... .....++|+.+++|+++++++++.++| .
T Consensus 87 r~~~----~~~v~~~y~a~~~~~----~~~~~~~e~~~~~W~~~~el~~l~~dh-------------------------~ 133 (226)
T 2fb1_A 87 RDPG----ERVVSIAYYALININ----EYDRELVQKHNAYWVNINELPALIFDH-------------------------P 133 (226)
T ss_dssp SSSS----SCEEEEEEEEECCTT----SSCHHHHHHTTEEEEETTSCCCBSTTH-------------------------H
T ss_pred cCCC----ceEEEEEEEEEecCc----ccccCCccccceEEEEHHHhhhccCCH-------------------------H
Confidence 4332 356777888865332 112344688999999999997766554 4
Q ss_pred hhhhhhHHHHHHHhhhhccccchhhcCCCHHHHHHHH
Q 004451 168 NTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALV 204 (753)
Q Consensus 168 ~~~~~~lell~r~~~~~pv~~~~~f~~Lt~~Ek~yl~ 204 (753)
.+...+++.++.+..|.|+.+....+.||..|.+.+|
T Consensus 134 ~il~~a~~rlr~~~~y~~i~~~llp~~ftl~~l~~~y 170 (226)
T 2fb1_A 134 EMVDKAREMMKQKASVEPIGFNLLPKLFTLSQLQSLY 170 (226)
T ss_dssp HHHHHHHHHHHHHHHHSGGGGGGSCSEEEHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccCchHHHhCCccccHHHHHHHH
Confidence 5667777888999999999999999999998776555
No 7
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.78 E-value=7.4e-19 Score=174.93 Aligned_cols=138 Identities=25% Similarity=0.430 Sum_probs=103.0
Q ss_pred cccc-ccCCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCce-EE
Q 004451 2 SEVH-RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF-EF 79 (753)
Q Consensus 2 ~~vh-~~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L-~~ 79 (753)
..+| ..|..|++|.++|++ ++++|||++|+..+..++|.|++||||++++|||+.+||+||++||||+++.. + ..
T Consensus 22 ~~~~~~~~~~~~~v~~~i~~-~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~--~~~~ 98 (190)
T 1hzt_A 22 YAAHTADTRLHLAFSSWLFN-AKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITP--PESI 98 (190)
T ss_dssp ---------CEECEEEEEEC-TTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSC--CEEE
T ss_pred hhhcccCCceEEEEEEEEEc-CCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchh--hhee
Confidence 4578 788999999999998 67899999998777778999999339999999999999999999999999654 4 55
Q ss_pred EEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcCCCCcccC
Q 004451 80 VFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 148 (753)
Q Consensus 80 l~~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~~~~~~pw 148 (753)
++.+.+....+++. ..+.+.++|.+.... .+.++++|+.+++|++++++.+++.+++..++||
T Consensus 99 ~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~-----~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~ 161 (190)
T 1hzt_A 99 YPDFRYRATDPSGI-VENEVCPVFAARTTS-----ALQINDDEVMDYQWCDLADVLHGIDATPWAFSPW 161 (190)
T ss_dssp ETTCEEEEECTTSC-EEEEECCEEEEEBCS-----CCCCCTTTEEEEEEECHHHHHHHHHHCGGGBCHH
T ss_pred eeeEEEEeeCCCCC-cceEEEEEEEEecCC-----CCcCCccceeeEEEecHHHHHHHHHcChhhcCch
Confidence 55555443333321 235667788886533 2345668999999999999999998877678887
No 8
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.78 E-value=4.6e-19 Score=183.73 Aligned_cols=158 Identities=19% Similarity=0.182 Sum_probs=124.5
Q ss_pred ceEEEEEEEEec--CCCEEEEEEeCCCCCCCCCCeeecccccCCC--CCCHHHHHHHHHHHHHCCccCCCceEEEEEEEe
Q 004451 10 YHRTVNAWIFAE--STQELLLQRRADFKDSWPGMWDISSAGHISA--GDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 85 (753)
Q Consensus 10 ~h~aV~v~V~~~--~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~--gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~ 85 (753)
.+.+|+|+|+.. ++++|||++|.. .+++|.|.+| ||++++ |||+.+||+||++||||+++ ..+.+++++..
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~lP-GG~ve~~~gEs~~~AA~REl~EEtGl~~--~~~~~l~~~~~ 95 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSN--HPFLGLWGLP-GGFIDETCDESLEQTVLRKLAEKTAVVP--PYIEQLCTVGN 95 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCS--SSSTTCEECS-EEECCTTTCSBHHHHHHHHHHHHHSSCC--SEEEEEEEEEE
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcC--CCCCCCEECC-ccccCCCCCcCHHHHHHHHHHHHHCCCC--CceeeEEEeCC
Confidence 468999999832 334999999975 4578999999 999999 99999999999999999985 45888998887
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHh--HHhcCCCCcccCCCCCchhHHHHHHHH
Q 004451 86 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN--LLAKDDPSFVPYDVNGGYGQLFNIISQ 163 (753)
Q Consensus 86 ~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~--l~~~~~~~~~pw~~~~~~~~~f~~i~~ 163 (753)
..+.++ .+.+.++|++.+... .....++|+.+++|+++++++. +.++|
T Consensus 96 ~~r~~~----~~~~~~~y~a~~~~~----~~~~~~~e~~~~~W~~~~el~~~~l~~dh---------------------- 145 (240)
T 3gz5_A 96 NSRDAR----GWSVTVCYTALMSYQ----ACQIQIASVSDVKWWPLADVLQMPLAFDH---------------------- 145 (240)
T ss_dssp SSSSTT----SCEEEEEEEEECCHH----HHHHHHTTCTTEEEEEHHHHTTSCCSTTH----------------------
T ss_pred CccCCC----ceEEEEEEEEEeccc----ccCCCCCcccceEEecHHHcccCCcchhH----------------------
Confidence 655443 367778888864321 1122456889999999999963 44433
Q ss_pred HhhhhhhhhhHHHHHHHhhhhccccchhhcCCCHHHHHHHHH
Q 004451 164 RYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVL 205 (753)
Q Consensus 164 ~~~~~~~~~~lell~r~~~~~pv~~~~~f~~Lt~~Ek~yl~~ 205 (753)
..+...+++.++.+..|+|+.+...++.||..|.+-+|-
T Consensus 146 ---~~il~~a~~rlr~kl~y~~i~~~llp~~Ftl~~l~~~ye 184 (240)
T 3gz5_A 146 ---LQLIEQARERLTQKALYSLVPGFALSEPFTLPELQHVHE 184 (240)
T ss_dssp ---HHHHHHHHHHHHHHHHHCSGGGGGSCSSBCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHhcccCcHHHHhCCCCccHHHHHHHHH
Confidence 566778888899999999999999999999998776653
No 9
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.77 E-value=2.2e-18 Score=181.98 Aligned_cols=174 Identities=13% Similarity=0.167 Sum_probs=126.2
Q ss_pred ceEEEEEEEEecCCC----EEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEe
Q 004451 10 YHRTVNAWIFAESTQ----ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 85 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g----~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~ 85 (753)
.+.+|+++|+...++ +|||++|... +++|.|.+| ||++++|||+.+||+||+.||||+++....+.+++++..
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lP-GG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l~~~~~ 114 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALP-GGFVNRNESTEDSVLRETKEETGVVISQENIEQLHSFSR 114 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECC-EEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEEEEECC
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECC-ccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEEEEEcC
Confidence 468899988864333 8999999764 578999999 999999999999999999999998876667888988875
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcCCC---------CcccCCCCCchhH
Q 004451 86 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDP---------SFVPYDVNGGYGQ 156 (753)
Q Consensus 86 ~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~~~---------~~~pw~~~~~~~~ 156 (753)
..+++. .+.++++|++.+.... ....+|+.+++|++++++.+.+..+.+ ...+... ...
T Consensus 115 ~~r~~~----~~~~~~~y~a~~~~~~-----~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~---~~L 182 (273)
T 2fml_A 115 PDRDPR----GWVVTVSYLAFIGEEP-----LIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGK---DTL 182 (273)
T ss_dssp TTSSTT----SSEEEEEEEEECCCCC-----CCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSS---SCC
T ss_pred CCCCCC----ceEEEEEEEEEeCCCC-----CCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCC---Ccc
Confidence 444332 3677888888653321 234578999999999987554311100 0000000 000
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHhhhhccccchhhcCCCHHHHHHHH
Q 004451 157 LFNIISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALV 204 (753)
Q Consensus 157 ~f~~i~~~~~~~~~~~~lell~r~~~~~pv~~~~~f~~Lt~~Ek~yl~ 204 (753)
+|+. ..+...+++.++.+..|+|+.+...++.||..|.+-+|
T Consensus 183 afdH------~~Il~~al~rlr~kl~y~~i~~~llp~~FTl~~l~~~y 224 (273)
T 2fml_A 183 AFDH------SEIIIKAFNRVVDKMEHEPQVLQVLGKDFTITEARKVF 224 (273)
T ss_dssp STTH------HHHHHHHHHHHHHHTTTCCGGGGGGCSCBCHHHHHHHH
T ss_pred cccH------HHHHHHHHHHHHHHhcCCcHHHHhCCccccHHHHHHHH
Confidence 1110 45677888899999999999999999999999888766
No 10
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.69 E-value=1.9e-16 Score=155.57 Aligned_cols=123 Identities=28% Similarity=0.374 Sum_probs=97.2
Q ss_pred cccccCCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEE
Q 004451 3 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFT 82 (753)
Q Consensus 3 ~vh~~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~ 82 (753)
.+|..+..|+++.++|++ .+++|||++|+..+..++|.|++||||++++|||+.+||+||++||||+.+. .+..++.
T Consensus 29 ~~~~~~~~~~~~~v~i~~-~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~--~~~~l~~ 105 (180)
T 2fkb_A 29 QMRAQCLRHRATYIVVHD-GMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGV--PFAEHGQ 105 (180)
T ss_dssp HHHHHTCCEEEEEEEEEC-SSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSC--CCEEEEE
T ss_pred HhhccCceeeEEEEEEEC-CCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCcc--ceEEEEE
Confidence 467788899999999998 6789999999877667799999944999999999999999999999999854 3566776
Q ss_pred EEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 83 FLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 83 ~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
+.+.. . ..+...++|.+.... .+.++++|+.++.|++++++.+++.
T Consensus 106 ~~~~~--~----~~~~~~~~f~~~~~~-----~~~~~~~E~~~~~W~~~~el~~~~~ 151 (180)
T 2fkb_A 106 FYFED--K----NCRVWGALFSCVSHG-----PFALQEDEVSEVCWLTPEEITARCD 151 (180)
T ss_dssp EEEEE--T----TEEEEEEEEEEECCC-----CCCCCTTTEEEEEEECHHHHHTTGG
T ss_pred EEecC--C----CceEEEEEEEEecCC-----CcCCChhHhheEEEecHHHHHHHHH
Confidence 65432 1 135567788876322 2345678999999999999988653
No 11
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.69 E-value=2e-16 Score=154.21 Aligned_cols=117 Identities=22% Similarity=0.320 Sum_probs=93.7
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCee-ecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEE-eeee
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWD-ISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL-QQNV 88 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~-lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~-~~~~ 88 (753)
|+++.++|++ .+|+|||+||+..+..++|.|+ +| ||++++|||+.+||+||++||||+++....+..++++. +..
T Consensus 34 ~~~v~v~i~~-~~~~vLl~~r~~~~~~~~g~w~~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~- 110 (171)
T 1q27_A 34 VRVVNAFLRN-SQGQLWIPRRSPSKSLFPNALDVSV-GGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQT- 110 (171)
T ss_dssp CEEEEEEEEE-TTTEEEECCSCCSSSCCCCSCCCSE-EEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSS-
T ss_pred ceEEEEEEEC-CCCeEEEEEecCCCCCCCCcccccc-CccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCC-
Confidence 8999999998 6789999999777767899999 88 99999999999999999999999998766677787765 322
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004451 89 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 89 ~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
+. .+ +.++|.+.... .+.+++.|+.+++|++++++.+++...
T Consensus 111 -~~----~~-~~~~f~~~~~~-----~~~~~~~E~~~~~W~~~~el~~~~~~~ 152 (171)
T 1q27_A 111 -TL----SS-FMCVYELRSDA-----TPIFNPNDISGGEWLTPEHLLARIAAG 152 (171)
T ss_dssp -CC----SS-EEEEEEEECCC-----CCCSCTTTCSCCEEECHHHHHHHHHHH
T ss_pred -CC----cc-EEEEEEEEECC-----ccccCchhhheEEEecHHHHHHHHhcC
Confidence 11 12 66788776521 234566789999999999999876543
No 12
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.68 E-value=2.1e-16 Score=148.80 Aligned_cols=110 Identities=21% Similarity=0.288 Sum_probs=81.2
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
+.+++++|++ +|+|||+||. .|.|.+| ||++++|||+.+||+||++||||+++.. +..++.+.+....+
T Consensus 4 ~~aag~vv~~--~~~vLL~~r~------~g~W~~P-gG~ve~gEt~~~aa~RE~~EEtGl~~~~--~~~l~~~~~~~~~~ 72 (134)
T 3i7u_A 4 EFSAGGVLFK--DGEVLLIKTP------SNVWSFP-KGNIEPGEKPEETAVREVWEETGVKGEI--LDYIGEIHYWYTLK 72 (134)
T ss_dssp EEEEEEEEEE--TTEEEEEECT------TSCEECC-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEEEET
T ss_pred EEEEEEEEEE--CCEEEEEEeC------CCcEECC-eeEecCCCCHHHHHHHHHHHhcCceEEE--eeeeeeeeEEecCC
Confidence 6788899987 6899999884 3789999 9999999999999999999999999653 44555554443322
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 138 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~ 138 (753)
+. ..+...++|.+...... +.++ +|+.+++|++++|+++++
T Consensus 73 ~~--~~~~~~~~f~~~~~~~~----~~~~-~E~~~~~W~~~~e~~~~l 113 (134)
T 3i7u_A 73 GE--RIFKTVKYYLMKYKEGE----PRPS-WEVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp TE--EEEEEEEEEEEEEEEEC----CCCC-TTSSEEEEEEHHHHHHHB
T ss_pred Cc--eEEEEEEEEEEEEcCCc----CcCC-hhheEEEEEEHHHHhhhc
Confidence 22 12334456777654322 2333 689999999999998875
No 13
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.66 E-value=2.2e-15 Score=144.32 Aligned_cols=126 Identities=20% Similarity=0.343 Sum_probs=96.3
Q ss_pred ccccCCceEEEEEEEEecCCCEEEEEEeCCC--CCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEE
Q 004451 4 VHRVGDYHRTVNAWIFAESTQELLLQRRADF--KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVF 81 (753)
Q Consensus 4 vh~~g~~h~aV~v~V~~~~~g~VLL~kRs~~--k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~ 81 (753)
.+.....|+++.++|++ .+++|||++|... +..++|.|++| ||+++.|||+.+||+||+.||||+.+.. +..++
T Consensus 6 ~~~~~~~~~~~~~vi~~-~~~~vLl~~r~~~~~~~~~~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~l~ 81 (159)
T 1sjy_A 6 RTHVPVELRAAGVVLLN-ERGDILLVQEKGIPGHPEKAGLWHIP-SGAVEDGENPQDAAVREACEETGLRVRP--VKFLG 81 (159)
T ss_dssp CCCCCCCEEEEEEEEBC-TTCCEEEEEESCC----CCCCCEECS-EEECCTTSCHHHHHHHHHHHHHSCCEEE--EEEEE
T ss_pred cCCCCeEEEeEEEEEEe-CCCCEEEEEecccCcCCCCCCeEECC-ccccCCCCCHHHHHHHHHHHHHCcccee--eEEEE
Confidence 45566779999999998 6789999999752 34578999999 9999999999999999999999999643 55666
Q ss_pred EEEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccC-CccceeeEEEeCHHHHHhHHhcC
Q 004451 82 TFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL-QQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 82 ~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~-~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
.+.+.. +++ .+...++|.+...... .+.+ +++|+.++.|++++++.+++..+
T Consensus 82 ~~~~~~--~~~---~~~~~~~f~~~~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 82 AYLGRF--PDG---VLILRHVWLAEPEPGQ---TLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp EEEEEC--TTS---CEEEEEEEEEEECSSC---CCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred EEeccc--CCC---ceEEEEEEEEEccCCC---ccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 655432 322 3567788888764322 1344 56799999999999999998754
No 14
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.64 E-value=3e-15 Score=143.13 Aligned_cols=115 Identities=22% Similarity=0.261 Sum_probs=88.5
Q ss_pred CCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeee
Q 004451 8 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 87 (753)
Q Consensus 8 g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~ 87 (753)
...+.+|.++|++ .+++|||++|...+..++|.|.+| ||++++||++.+||+||+.||||+.+.... .++.+.+..
T Consensus 5 ~~~~~~v~~vi~~-~~~~vLL~~r~~~~~~~~g~w~~P-gG~ve~gE~~~~aa~REl~EE~Gl~~~~~~--~~~~~~~~~ 80 (153)
T 3grn_A 5 KPYIISVYALIRN-EKGEFLLLRRSENSRTNAGKWDLP-GGKVNPDESLKEGVAREVWEETGITMVPGD--IAGQVNFEL 80 (153)
T ss_dssp SCEEEEEEEEEEC-TTCCEEEEEECTTCSSSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCCCCCCCS--EEEEEEEEC
T ss_pred CceEEEEEEEEEc-CCCcEEEEEEcCCCCCCCCeEECc-eeecCCCCCHHHHHHhhhhhhhCcEeecce--EEEEEEEec
Confidence 3468899999998 678999999987656789999999 999999999999999999999999976544 444444322
Q ss_pred ecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 88 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 88 ~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
+. .+...++|.+...... +.+ .+|+.+++|++++++.++
T Consensus 81 --~~----~~~~~~~~~~~~~~~~----~~~-~~e~~~~~W~~~~el~~~ 119 (153)
T 3grn_A 81 --TE----KKVIAIVFDGGYVVAD----VKL-SYEHIEYSWVSLEKILGM 119 (153)
T ss_dssp --SS----CEEEEEEEEEEECCCC----CCC-CTTEEEEEEECHHHHTTC
T ss_pred --CC----ceEEEEEEEEEecCCc----Eec-CCCcceEEEEEHHHhhhc
Confidence 21 3556777887654322 122 368899999999999654
No 15
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.62 E-value=2.7e-16 Score=150.76 Aligned_cols=124 Identities=19% Similarity=0.182 Sum_probs=83.8
Q ss_pred ccccCCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEE
Q 004451 4 VHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF 83 (753)
Q Consensus 4 vh~~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~ 83 (753)
++.....|.+|.++|++ ++++|||++|. +|.|.+| ||++++||++.+||+||++||||+++.. +..++.+
T Consensus 14 ~~~~~~~~~~v~~ii~~-~~~~vLL~~r~------~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~ 83 (153)
T 3eds_A 14 LGHELIFXPSVAAVIKN-EQGEILFQYPG------GEYWSLP-AGAIELGETPEEAVVREVWEETGLKVQV--KKQKGVF 83 (153)
T ss_dssp HTTSCEEEEEEEEEEBC-TTCCEEEECC---------CBBCS-EEECCTTSCHHHHHHHHHHHHHCEEEEE--EEEEEEE
T ss_pred cCCCcEEeeeEEEEEEc-CCCeEEEEEcC------CCcEECC-ccccCCCCCHHHHHHHHHHHHHCcccee--eeEEEEe
Confidence 34455678999999998 67899999885 6899999 9999999999999999999999999653 4455554
Q ss_pred Ee---eeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcCC
Q 004451 84 LQ---QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 142 (753)
Q Consensus 84 ~~---~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~~ 142 (753)
.. ...++++. ..+.+.++|.+...... +.++++|+.+++|+++++++++...++
T Consensus 84 ~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~----~~~~~~E~~~~~W~~~~el~~l~~~~p 140 (153)
T 3eds_A 84 GGKEYRYTYSNGD-EVEYIVVVFECEVTSGE----LRSIDGESLKLQYFSLSEKPPLALPYP 140 (153)
T ss_dssp CSGGGEEECTTSC-EEEEEEEEEEEEEEEEC----CC-------CEEEECGGGCCCBSSCCC
T ss_pred cccceeeecCCCC-eEEEEEEEEEEEecCCc----cccCCCcEEEEEEECHHHCchhcccCc
Confidence 21 11123321 22446677888654322 245567899999999999988766543
No 16
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.62 E-value=4.2e-15 Score=142.55 Aligned_cols=120 Identities=16% Similarity=0.209 Sum_probs=89.1
Q ss_pred ceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeec
Q 004451 10 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 89 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~ 89 (753)
...+|.++|++ ++++|||++|+. ..++|.|.+| ||++++||++.+||+||+.||||+.+....+..++.+.+....
T Consensus 17 ~~~~v~~vi~~-~~~~vLl~~r~~--~~~~g~w~~P-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 92 (160)
T 1rya_A 17 PLVSLDFIVEN-SRGEFLLGKRTN--RPAQGYWFVP-GGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDD 92 (160)
T ss_dssp CEEEEEEEEEC-TTSCEEEEEECS--SSSTTSEECC-EEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESS
T ss_pred cEEEEEEEEEc-CCCEEEEEeccC--CCCCCEEECC-ccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEcc
Confidence 45789999998 678999999975 3468999999 9999999999999999999999999643345666666543321
Q ss_pred C--CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 90 N--DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 90 ~--~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
. +.....+.+.++|.+..... .+..+++|+.+++|++++++.++
T Consensus 93 ~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 93 NFSGTDFTTHYVVLGFRFRVSEE----ELLLPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp BTTBSSSCEEEEEEEEEEECCGG----GCCCCSSSEEEEEEECHHHHHHC
T ss_pred cccCCCcCcEEEEEEEEEEcCcc----ccccCCCccceEEEecHHHHhhc
Confidence 1 11112256777888865322 23455679999999999999874
No 17
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.62 E-value=4.5e-15 Score=143.67 Aligned_cols=123 Identities=20% Similarity=0.246 Sum_probs=78.4
Q ss_pred CCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEE--e
Q 004451 8 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL--Q 85 (753)
Q Consensus 8 g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~--~ 85 (753)
+..|+++.++|++ .+++|||++|+..+..++|.|++| ||++++||++.+||+||++||||+++....+..+.... .
T Consensus 24 ~~~~~~~~~~ii~-~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 101 (165)
T 3oga_A 24 AMRQRTIVCPLIQ-NDGCYLLCKMADNRGVFPGQWALS-GGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIR 101 (165)
T ss_dssp CCEEEEEEEEEEE-ETTEEEEEEECC------CCEECC-CEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEE
T ss_pred CcceEEEEEEEEe-CCCEEEEEEecCCCCCCCCeEECC-ccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeeccee
Confidence 4568888888887 578999999987666789999999 99999999999999999999999997543333221100 0
Q ss_pred eeecCCCcccc-eEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 86 QNVINDGKFIN-NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 86 ~~~~~~g~~~~-~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
...++++.+.. +.+..+|.+...... +.. ++|+.+++|++++++.++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 102 IKTYADGRQEEIYMIYLIFDCVSANRD----ICI-NDEFQDYAWVKPEELALY 149 (165)
T ss_dssp EEEC--CCEEEEEEEEEEEEEEESCCC----CCC-CTTEEEEEEECGGGGGGS
T ss_pred eEecCCCCceeEEEEEEEEEeeccCCC----ccC-CchheeeEEccHHHHhhC
Confidence 11222222111 122334444432221 122 368999999999999764
No 18
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.62 E-value=1e-14 Score=136.41 Aligned_cols=115 Identities=19% Similarity=0.222 Sum_probs=83.3
Q ss_pred ceEEEEEEEEecC--CCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCce--EEEEEEEe
Q 004451 10 YHRTVNAWIFAES--TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF--EFVFTFLQ 85 (753)
Q Consensus 10 ~h~aV~v~V~~~~--~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L--~~l~~~~~ 85 (753)
.+++++++|++.+ +++|||+||+. .+|.|.+| ||++++|||+.+||+||++||||+.+....+ ..++.+.+
T Consensus 2 ~~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 76 (138)
T 1ktg_A 2 VVKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPP-KGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFY 76 (138)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEESS----TTCCEESS-EEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCC-ccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEE
Confidence 4678889988732 35899999962 35899999 9999999999999999999999997543222 12233333
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 86 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 86 ~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
.. + ..+...++|.+...... ...+++|+.+++|++++++.+++.
T Consensus 77 ~~--~----~~~~~~~~f~~~~~~~~----~~~~~~e~~~~~W~~~~el~~~~~ 120 (138)
T 1ktg_A 77 EA--K----GKPKSVKYWLAKLNNPD----DVQLSHEHQNWKWCELEDAIKIAD 120 (138)
T ss_dssp EE--T----TEEEEEEEEEEEECSCC----CCCCCTTEEEEEEECHHHHHHHHC
T ss_pred Ee--C----CCceEEEEEEEEecCCc----ccCCCchhcEeEeccHHHHHHhhc
Confidence 22 2 13566778888765421 134567999999999999998754
No 19
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.61 E-value=4.2e-15 Score=140.00 Aligned_cols=115 Identities=17% Similarity=0.274 Sum_probs=87.9
Q ss_pred CceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeee
Q 004451 9 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 88 (753)
Q Consensus 9 ~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~ 88 (753)
..+.++.++|++ .+++|||+||... ..++|.|.+| ||+++.||++.+||+||+.||||+.+....+..+..+.+..
T Consensus 6 ~~~~~~~~vi~~-~~~~vLl~~r~~~-~~~~g~w~lP-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~- 81 (144)
T 3r03_A 6 PILLVTAAALID-PDGRVLLAQRPPG-KSLAGLWEFP-GGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSY- 81 (144)
T ss_dssp CEEEEEEEEEBC-TTSCEEEEECCTT-SSSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC-
T ss_pred ceeEEEEEEEEc-CCCEEEEEEeCCC-CCCCCcEECC-CcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccC-
Confidence 357788888887 6789999999754 4589999999 99999999999999999999999997765556665554432
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004451 89 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 138 (753)
Q Consensus 89 ~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~ 138 (753)
. ..+...++|.+..... .+...|..+++|++++++.++.
T Consensus 82 -~----~~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~~ 120 (144)
T 3r03_A 82 -D----TFHLLMPLYACRSWRG------RATAREGQTLAWVRAERLREYP 120 (144)
T ss_dssp -S----SSEEEEEEEEECCCBS------CCCCCSSCEEEEECGGGGGGSC
T ss_pred -C----CeEEEEEEEEEEecCC------ccCCCCcceEEEEeHHHhccCC
Confidence 2 1355667777754322 2345688899999999997653
No 20
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.61 E-value=1e-15 Score=151.93 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=86.6
Q ss_pred cCCceEEEEEEEEecCC------CEEEEEEeCC-----CCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCC
Q 004451 7 VGDYHRTVNAWIFAEST------QELLLQRRAD-----FKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKD 75 (753)
Q Consensus 7 ~g~~h~aV~v~V~~~~~------g~VLL~kRs~-----~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~ 75 (753)
..+.|.+|+|+|+..++ ++|||++|+. .+..++|.|.+| ||++++|||+.+||+||++||||+++.
T Consensus 23 ~~p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lP-GG~ve~gEs~~~aa~REl~EEtGl~~~-- 99 (187)
T 3i9x_A 23 RTPDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVP-GGFVDENESAEQAAERELEEETSLTDI-- 99 (187)
T ss_dssp CCCSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECS-EEECCTTSCHHHHHHHHHHHHHCCCSC--
T ss_pred CCcccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECC-ceeCCCCCCHHHHHHHHHHHHHCCCCc--
Confidence 34557889988876433 4899999954 234678999999 999999999999999999999999854
Q ss_pred ceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHh
Q 004451 76 AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 136 (753)
Q Consensus 76 ~L~~l~~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~ 136 (753)
.+..++.+....+.++ .+.+..+|++....... ......+|+.+++|++++++++
T Consensus 100 ~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~E~~~~~W~~~~el~~ 154 (187)
T 3i9x_A 100 PLIPFGVFDKPGRDPR----GWIISRAFYAIVPPEAL--EKRAAGDDAAEIGLFPMTEALE 154 (187)
T ss_dssp CCEEEEEECCTTSSTT----SSEEEEEEEEECCHHHH--HHHHHSTTTTTEEEEEHHHHTT
T ss_pred ceEEEEEEcCCccCCC----CCEEEEEEEEEEcCccc--CCcCCCCceeEEEEEeHHHccc
Confidence 4667777655433222 34566677765422110 0122346888999999999975
No 21
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.60 E-value=1.1e-14 Score=137.64 Aligned_cols=124 Identities=19% Similarity=0.283 Sum_probs=86.3
Q ss_pred CccccccCCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEE
Q 004451 1 MSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV 80 (753)
Q Consensus 1 ~~~vh~~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l 80 (753)
|+.+++. .+.+|.++|++.++++|||++|+.. +|.|.+| ||++++|||+.+||+||++||||+.+....+..+
T Consensus 1 m~~m~~~--~~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~ 73 (150)
T 2o1c_A 1 MKDKVYK--RPVSILVVIYAQDTKRVLMLQRRDD----PDFWQSV-TGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLI 73 (150)
T ss_dssp -CCCCCB--CSEEEEEEEEETTTCEEEEEECSSS----TTCEESE-EEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEE
T ss_pred CCccccc--CceEEEEEEEeCCCCEEEEEEecCC----CCceECC-ccccCCCCCHHHHHHHHHHHHhCCCccccceeEE
Confidence 4554432 2478899999833489999998653 6899999 9999999999999999999999999754323333
Q ss_pred EEEEee---------eecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004451 81 FTFLQQ---------NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 138 (753)
Q Consensus 81 ~~~~~~---------~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~ 138 (753)
+..... ..++++ ..+...++|.+....... ....|+.+++|++++++.++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~f~~~~~~~~~-----~~~~E~~~~~W~~~~el~~~~ 133 (150)
T 2o1c_A 74 DCQRTVEFEIFSHLRHRYAPG--VTRNTESWFCLALPHERQ-----IVFTEHLAYKWLDAPAAAALT 133 (150)
T ss_dssp EEEEEEEEECCGGGGGGBCTT--CCEEEEEEEEEEESSCCC-----CCCSSSSCEEEEEHHHHHHHC
T ss_pred eeeceeeeeeecccccccCCC--CcceEEEEEEEEcCCCCC-----cChhHhhccEeecHHHHHhhh
Confidence 322211 011222 135677888887654321 223688999999999998864
No 22
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.60 E-value=1.3e-14 Score=139.36 Aligned_cols=116 Identities=23% Similarity=0.272 Sum_probs=78.8
Q ss_pred EEEEEEEEe--------cCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEE
Q 004451 12 RTVNAWIFA--------ESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF 83 (753)
Q Consensus 12 ~aV~v~V~~--------~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~ 83 (753)
++.+++||. .++.++||+||+.. +|.|.+| ||++++|||+.+||+||++||||+++.. ...+..+
T Consensus 4 ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~----~~~W~lP-gG~ve~gEt~~~aa~REl~EEtGl~~~~--~~~~~~~ 76 (155)
T 3u53_A 4 RACGLIIFRRCLIPKVDNNAIEFLLLQASDG----IHHWTPP-KGHVEPGEDDLETALRETQEEAGIEAGQ--LTIIEGF 76 (155)
T ss_dssp CEEEEEEEEECCCSSSSSCSEEEEEEEESSS----SCCEECS-EEECCSSCCHHHHHHHHHHHHHCCCGGG--EEEEEEE
T ss_pred eEeEEEEEccccccceeCCCcEEEEEEecCC----CCCEECC-eeeccCCCCHHHHHHHHHHHHHCCcccc--ceeeeeE
Confidence 567778772 14458999999653 5889999 9999999999999999999999999654 3444444
Q ss_pred EeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 84 LQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 84 ~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
......... .......+|++....... . ...++|+.+++|++++|+.+++.
T Consensus 77 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~-~~~~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 77 KRELNYVAR--NKPKTVIYWLAEVKDYDV--E-IRLSHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp EEEEEEEET--TEEEEEEEEEEEESCTTC--C-CCCCTTEEEEEEECHHHHHHHHC
T ss_pred eeeeecCCC--cceeEEEEEEEEEeccCC--c-cCCCcceeEEEEeEHHHHHHHcC
Confidence 332221111 123344555555433211 1 22346899999999999988763
No 23
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.59 E-value=1.4e-14 Score=134.58 Aligned_cols=110 Identities=21% Similarity=0.291 Sum_probs=81.8
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
..++.++|++ +++|||+||.. |.|.+| ||++++|||+.+||.||++||||+++.. +..++.+.+....+
T Consensus 4 ~~~~~~vi~~--~~~vLl~~r~~------~~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~--~~~~~~~~~~~~~~ 72 (134)
T 2pbt_A 4 EFSAGGVLFK--DGEVLLIKTPS------NVWSFP-KGNIEPGEKPEETAVREVWEETGVKGEI--LDYIGEIHYWYTLK 72 (134)
T ss_dssp EEEEEEEEEE--TTEEEEEECTT------SCEECC-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEEEET
T ss_pred ceEEEEEEEE--CCEEEEEEeCC------CcEECC-ccccCCCCCHHHHHHHHHHHHHCCccEE--eeeeeEEEEEeeCC
Confidence 4678888887 57999999843 899999 9999999999999999999999999653 45566554443322
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 138 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~ 138 (753)
+. ..+...++|.+...... ..+++ |+.+++|++++++.++.
T Consensus 73 ~~--~~~~~~~~~~~~~~~~~----~~~~~-e~~~~~W~~~~el~~~~ 113 (134)
T 2pbt_A 73 GE--RIFKTVKYYLMKYKEGE----PRPSW-EVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp TE--EEEEEEEEEEEEEEEEC----CCCCT-TSSEEEEEEHHHHHHHC
T ss_pred Cc--EEEEEEEEEEEEecCCC----cCCCc-ceeEEEEEcHHHHHhhh
Confidence 21 23456677877664332 13333 88999999999998764
No 24
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.58 E-value=1.2e-14 Score=136.77 Aligned_cols=110 Identities=21% Similarity=0.192 Sum_probs=78.3
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCC-CCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeec
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDS-WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 89 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~-~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~ 89 (753)
..++.++|++ +++|||+||...+.. ++|.|.+| ||++++||++.+||+||+.||||+++.. +..++.+.+..
T Consensus 6 ~~~v~~vi~~--~~~vLL~~r~~~~~~~~~g~w~lP-gG~ve~gE~~~~aa~REl~EE~Gl~~~~--~~~~~~~~~~~-- 78 (140)
T 3gwy_A 6 IEVVAAVIRL--GEKYLCVQRGQTKFSYTSFRYEFP-GGKVEEGESLQEALQREIMEEMDYVIEV--GEKLLTVHHTY-- 78 (140)
T ss_dssp EEEEEEEEEE--TTEEEEEEC---------CCEECS-EEECCTTCCHHHHHHHHHHHHHCCCEEE--EEEEEEEECCC--
T ss_pred EEEEEEEEEe--CCEEEEEEecCCCCCCCCCeEECC-CccCCCCCCHHHHHHHHHHHhhCcEEEe--ceEEEEEEEEe--
Confidence 3456666666 789999999764321 78999999 9999999999999999999999999643 45565554432
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 90 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 90 ~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
++ .+...++|.+..... .+..+|+.+++|++++++.++
T Consensus 79 ~~----~~~~~~~f~~~~~~~------~~~~~E~~~~~W~~~~el~~~ 116 (140)
T 3gwy_A 79 PD----FEITMHAFLCHPVGQ------RYVLKEHIAAQWLSTREMAIL 116 (140)
T ss_dssp SS----CCEEEEEEEEEECCS------CCCCCSSCEEEEECHHHHTTS
T ss_pred CC----ceEEEEEEEEEecCC------cccccccceeEeccHHHHhhC
Confidence 21 356678888876443 233468899999999999764
No 25
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.58 E-value=1.1e-14 Score=138.82 Aligned_cols=109 Identities=20% Similarity=0.297 Sum_probs=82.0
Q ss_pred ceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeec
Q 004451 10 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 89 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~ 89 (753)
.+.+|.+++.+ +++|||+||. ...+|.|.+| ||++++|||+.+||+||++||||+++... ..++.+.+..
T Consensus 4 p~~~v~~ii~~--~~~vLl~~r~---~~~~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~-- 73 (153)
T 3shd_A 4 PHVTVACVVHA--EGKFLVVEET---INGKALWNQP-AGHLEADETLVEAAARELWEETGISAQPQ--HFIRMHQWIA-- 73 (153)
T ss_dssp CEEEEEEEEEE--TTEEEEEEEE---ETTEEEEECS-EEECCTTCCHHHHHHHHHHHHHCCCCCCC--EEEEEEEECC--
T ss_pred CceEEEEEEEe--CCEEEEEEec---CCCCCCEECC-eEEeCCCCCHHHHHHHHHHHHHCcccccC--cEEEEEEEec--
Confidence 36677777765 7899999986 2357899999 99999999999999999999999997653 4444444332
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHH
Q 004451 90 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 134 (753)
Q Consensus 90 ~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El 134 (753)
++ ..+.+.++|.+...... ...+++.|+.+++|++++++
T Consensus 74 ~~---~~~~~~~~f~~~~~~~~---~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 74 PD---KTPFLRFLFAIELEQIC---PTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp TT---SCCEEEEEEEEECSSCC---CCCCCSTTCCEEEEECHHHH
T ss_pred CC---CceEEEEEEEEEccccC---cCCCCcccceeeEEecHHHh
Confidence 22 23556678888764432 13456679999999999999
No 26
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.58 E-value=8.2e-15 Score=141.13 Aligned_cols=114 Identities=21% Similarity=0.302 Sum_probs=85.9
Q ss_pred CceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeee
Q 004451 9 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 88 (753)
Q Consensus 9 ~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~ 88 (753)
..+.+|.++|++ +++|||+||... +++|.|.+| ||++++|||+.+||+||++||||+++.. +..++.+.+...
T Consensus 27 ~~~~~v~~vi~~--~~~vLL~~r~~~--~~~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~~~~~ 99 (157)
T 4dyw_A 27 QPRVGCGAAIVR--DGRILLIKRKRA--PEAGCWGLP-GGKVDWLEPVERAVCREIEEELGIALER--ATLLCVVDHIDA 99 (157)
T ss_dssp CCEEEEEEEEEE--TTEEEEEEECSS--SSTTCEECC-EEECCTTCCHHHHHHHHHHHHHSCEEES--CEEEEEEEEEET
T ss_pred CceeEEEEEEEE--CCEEEEEEecCC--CCCCEEECC-cccCCCCCCHHHHHHHHHHHHHCccccc--CcEEEEEEeecc
Confidence 457889999988 689999999753 378999999 9999999999999999999999999755 345555544332
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHh
Q 004451 89 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 136 (753)
Q Consensus 89 ~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~ 136 (753)
.. ..+.+.++|.+....... ...+++|+.+++|++++++.+
T Consensus 100 ~~----~~~~~~~~f~~~~~~~~~---~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 100 AN----GEHWVAPVYLAHAFSGEP---RVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp TT----TEEEEEEEEEESEEESCC---CCSCTTTEEEEEEEETTSCCS
T ss_pred CC----CcEEEEEEEEEEEcCCCc---ccCCCCcEeEEEEECHHHccc
Confidence 11 235566778876543221 123457899999999999954
No 27
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.57 E-value=1.1e-14 Score=139.99 Aligned_cols=113 Identities=20% Similarity=0.340 Sum_probs=86.2
Q ss_pred ceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeec
Q 004451 10 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 89 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~ 89 (753)
.++++.++|++ .+++|||+||... ..++|.|.+| ||++++||++.+||+||+.||||+.+....+..++.+.+..
T Consensus 28 ~~~~~~~~i~~-~~~~vLL~~r~~~-~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~-- 102 (158)
T 3hhj_A 28 LLIVVACALLD-QDNRVLLTQRPEG-KSLAGLWEFP-GGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGY-- 102 (158)
T ss_dssp EEEEEEEEEBC-TTSEEEEEECCCT-TSCCCCCBCC-EEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC--
T ss_pred eEEEEEEEEEe-CCCEEEEEEeCCC-CCCCCEEECC-ceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeecc--
Confidence 46777888887 6789999999654 4689999999 99999999999999999999999997765555666554432
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 90 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 90 ~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
++ .+...++|.+..... .+...|..+++|++++++.++
T Consensus 103 ~~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 103 ET----FHLLMPLYFCSHYKG------VAQGREGQNLKWIFINDLDKY 140 (158)
T ss_dssp SS----CEEEEEEEEESCCBS------CCCCTTSCEEEEEEGGGGGGS
T ss_pred CC----cEEEEEEEEEEECCC------ccCCccccceEEEcHHHHhhC
Confidence 21 255666777743222 234568889999999999764
No 28
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.57 E-value=2.8e-14 Score=131.18 Aligned_cols=106 Identities=22% Similarity=0.279 Sum_probs=80.5
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCC
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 91 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~ 91 (753)
.++.++|++ ++++|||+||+. |.|.+| ||++++|||+.+||+||+.||||+.+.. +..++.+.+.. ++
T Consensus 3 ~~~~~vi~~-~~~~vLl~~r~~------g~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~--~~~~~~~~~~~--~~ 70 (126)
T 1vcd_A 3 LGAGGVVFN-AKREVLLLRDRM------GFWVFP-KGHPEPGESLEEAAVREVWEETGVRAEV--LLPLYPTRYVN--PK 70 (126)
T ss_dssp EEEEEEEEC-TTSCEEEEECTT------SCEECC-EECCCTTCCHHHHHHHHHHHHHCCEEEE--EEEEEEEEEEC--TT
T ss_pred eEEEEEEEc-CCCEEEEEEECC------CCccCC-cCcCCCCCCHHHHHHHHHHHhhCcEeee--ccEEeEEEEec--CC
Confidence 578889998 678999999853 789999 9999999999999999999999999643 45566665433 21
Q ss_pred CcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004451 92 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 138 (753)
Q Consensus 92 g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~ 138 (753)
.+...++|.+...... ...+.|+.+++|++++++.+++
T Consensus 71 ----~~~~~~~~~~~~~~~~-----~~~~~e~~~~~w~~~~el~~~~ 108 (126)
T 1vcd_A 71 ----GVEREVHWFLMRGEGA-----PRLEEGMTGAGWFSPEEARALL 108 (126)
T ss_dssp ----SCEEEEEEEEEEEESC-----CCCCTTCCEEEEECHHHHHHHB
T ss_pred ----ceEEEEEEEEEEcCCC-----CCCCcceeeeEEcCHHHHHHhh
Confidence 2345567777553321 2234688999999999998764
No 29
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.57 E-value=2.7e-14 Score=142.84 Aligned_cols=123 Identities=22% Similarity=0.315 Sum_probs=80.1
Q ss_pred CCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCc-cCC--CceEEEEEEE
Q 004451 8 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGIN-LPK--DAFEFVFTFL 84 (753)
Q Consensus 8 g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~-v~~--~~L~~l~~~~ 84 (753)
...|+++.++|++.++++|||++|. .+|.|.+| ||++++|||+.+||+||++||||++ +.. ..+..+..+.
T Consensus 42 ~~~h~~~~~vv~~~~~~~vLL~~r~-----~~g~w~lP-gG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~ 115 (197)
T 3fcm_A 42 TIAHLTSSAFAVNKERNKFLMIHHN-----IYNSWAWT-GGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLT 115 (197)
T ss_dssp SSEEEEEEEEEECTTSCEEEEEEET-----TTTEEECE-EEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEE
T ss_pred CCccEEEEEEEEECCCCEEEEEEec-----CCCCEECC-ccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEee
Confidence 4679999999999433499999985 35899999 9999999999999999999999998 432 1222333222
Q ss_pred eeeecCCCcc-c-ceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 85 QQNVINDGKF-I-NNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 85 ~~~~~~~g~~-~-~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
.....+.+.. . ...+..+|++..... ..+.++++|+.+++|++++++.+++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~ 169 (197)
T 3fcm_A 116 VNGHIKRGKYVSSHLHLNLTYLIECSED---ETLMLKEDENSGVMWIPFNEISKYCS 169 (197)
T ss_dssp ECCEEETTEEECCEEEEEEEEEEECCTT---SCCCCCC----CEEEEEGGGHHHHCC
T ss_pred ecCccccCcccCCceeEEEEEEEEeCCC---cccCCCcccccceEEccHHHHHhhcC
Confidence 2221111110 0 112335566654322 22456678999999999999998765
No 30
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.57 E-value=9.5e-15 Score=139.92 Aligned_cols=115 Identities=19% Similarity=0.238 Sum_probs=84.5
Q ss_pred CceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeee
Q 004451 9 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 88 (753)
Q Consensus 9 ~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~ 88 (753)
..+.++.+++++ ++++|||++|.. .+++|.|.+| ||+++.|||+.+||+||++||||+++.. +..++.+..
T Consensus 18 ~~~~~v~~~i~~-~~~~vLl~~r~~--~~~~~~w~~P-gG~ve~gE~~~~aa~REl~EEtGl~~~~--~~~~~~~~~--- 88 (156)
T 3gg6_A 18 NVCYVVLAVFLS-EQDEVLLIQEAK--RECRGSWYLP-AGRMEPGETIVEALQREVKEEAGLHCEP--ETLLSVEER--- 88 (156)
T ss_dssp TCEEEEEEECBC-TTSEEEEEECCC--TTSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCEEEEE--EEEEEEEES---
T ss_pred ceEEEEEEEEEe-CCCEEEEEEecC--CCCCCEEECC-eeeccCCCCHHHHHHHHHHHhhCceeEe--eeEEEEEcC---
Confidence 345777788887 688999999965 3478999999 9999999999999999999999999643 445554431
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 89 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 89 ~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
. .+.+.++|.+....... .....+++|+.+++|++++++++++.
T Consensus 89 -~-----~~~~~~~f~~~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~ 132 (156)
T 3gg6_A 89 -G-----PSWVRFVFLARPTGGIL-KTSKEADAESLQAAWYPRTSLPTPLR 132 (156)
T ss_dssp -S-----TTEEEEEEEEEEEEECC-CCGGGCSSSCSEEEEEETTSCCSSBS
T ss_pred -C-----CCEEEEEEEEEeeCCee-ccCCCCCcceeeeEEEcHHHCccccc
Confidence 1 13456778887643221 11123457899999999999976554
No 31
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.56 E-value=8.6e-15 Score=140.75 Aligned_cols=123 Identities=18% Similarity=0.314 Sum_probs=84.1
Q ss_pred ccCCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEe
Q 004451 6 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 85 (753)
Q Consensus 6 ~~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~ 85 (753)
..|.+|.+|.++|++ .+++|||+||.. ++|.|++| ||++++|||+.+||+||++||||+++. .+........
T Consensus 9 ~~~~~~~~v~~~i~~-~~~~vLl~~r~~----~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~--~~~~~~~~~~ 80 (165)
T 1f3y_A 9 PPEGYRRNVGICLMN-NDKKIFAASRLD----IPDAWQMP-QGGIDEGEDPRNAAIRELREETGVTSA--EVIAEVPYWL 80 (165)
T ss_dssp CCSSCCCEEEEEEEC-TTSCEEEEEETT----EEEEEECC-EEECCTTCCHHHHHHHHHHHHHCCCSE--EEEEECSSCC
T ss_pred CccceeeeEEEEEEC-CCCcEEEEecCC----CCCcEECC-eeccCCCCCHHHHHHHHHHHhhCCChh--hhhcccccce
Confidence 356789999999998 678999999963 46999999 999999999999999999999999853 2222211000
Q ss_pred eeecCC-----------CcccceEEEEEEEEEEeCCCCCcCccC-----CccceeeEEEeCHHHHHhHHh
Q 004451 86 QNVIND-----------GKFINNEFADVYLVTTLNPIPLEAFTL-----QQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 86 ~~~~~~-----------g~~~~~~i~~vy~a~~~~~~~~~~~~~-----~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
...++. ..+. ....++|.+....... .+.+ +++|+.+++|++++++.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~--~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 147 (165)
T 1f3y_A 81 TYDFPPKVREKLNIQWGSDWK-GQAQKWFLFKFTGQDQ--EINLLGDGSEKPEFGEWSWVTPEQLIDLTV 147 (165)
T ss_dssp BCCCCHHHHHHHGGGSCSSCC-SCBEEEEEEEECSCGG--GCCCCCCSSSCCSEEEEEEECHHHHHHHBC
T ss_pred eeecCcccccccccccccccc-CceEEEEEEEecCCcc--cccccCCCCCCChhheeEEecHHHHHHHhh
Confidence 001110 0010 1234567776543221 1222 356999999999999998764
No 32
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.56 E-value=9.5e-15 Score=141.27 Aligned_cols=116 Identities=16% Similarity=0.263 Sum_probs=86.2
Q ss_pred ccCCceEEEEEEEEecCC-CEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEE
Q 004451 6 RVGDYHRTVNAWIFAEST-QELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL 84 (753)
Q Consensus 6 ~~g~~h~aV~v~V~~~~~-g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~ 84 (753)
.....+.++.++|++ ++ ++|||+||.. ..++|.|.+| ||++++|||+.+||+||+.||||+.+.. +..++.+.
T Consensus 5 r~~~~~~~v~~vi~~-~~~~~vLL~~r~~--~~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~ 78 (161)
T 3exq_A 5 RTQPVELVTMVMVTD-PETQRVLVEDKVN--VPWKAGHSFP-GGHVEVGEPCATAAIREVFEETGLRLSG--VTFCGTCE 78 (161)
T ss_dssp SCCCEEEEEEEEEBC-TTTCCEEEECCCC--CTTTCSBBCC-CCBCCTTSCHHHHHHHHHHHHHCCEESC--CEEEEEEE
T ss_pred ccCCceEEEEEEEEe-CCCCEEEEEEccC--CCCCCCEEcc-ceecCCCCCHHHHHHHHHHHhhCcEecC--CcEEEEEe
Confidence 344568899999988 44 6999999873 5688899999 9999999999999999999999999754 45566655
Q ss_pred eeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 85 QQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 85 ~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
+..+.. ..+...++|.+..... .+...|..+++|+++++++++
T Consensus 79 ~~~~~~----~~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 121 (161)
T 3exq_A 79 WFDDDR----QHRKLGLLYRASNFTG------TLKASAEGQLSWLPITALTRE 121 (161)
T ss_dssp EECSSC----SSEEEEEEEEECCEES------CCCGGGTTTEEEECGGGCCTT
T ss_pred cccCCC----CeEEEEEEEEEeccCC------ccCCCccceEEEeeHHHhhhC
Confidence 433211 2355667777743322 233567788999999999654
No 33
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.55 E-value=3.4e-14 Score=135.10 Aligned_cols=113 Identities=17% Similarity=0.129 Sum_probs=82.4
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
+.+|.+++.+ +++|||+||...+ . +|.|.+| ||++++|||+.+||+||++||||+++.. ...++.+.+.. +
T Consensus 8 ~~~v~~ii~~--~~~vLl~~r~~~~-~-~~~w~lP-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~--~ 78 (153)
T 2b0v_A 8 NVTVAAVIEQ--DDKYLLVEEIPRG-T-AIKLNQP-AGHLEPGESIIQACSREVLEETGHSFLP--EVLTGIYHWTC--A 78 (153)
T ss_dssp EEEEEEECEE--TTEEEEEEECSSS-S-CCEEECS-EEECCTTSCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEE--T
T ss_pred CEEEEEEEee--CCEEEEEEEcCCC-C-CCeEECC-CcCcCCCCCHHHHHHHHHHHhhCcEecc--ceEEEEEEEeC--C
Confidence 5566666654 6899999997643 2 7899999 9999999999999999999999999654 44555554433 2
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
+. ..+.+.++|.+....... ....++|+.+++|++++++.++
T Consensus 79 ~~--~~~~~~~~f~~~~~~~~~---~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 79 SN--GTTYLRFTFSGQVVSFDP---DRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp TT--TEEEEEEEEEEEEEEECT---TSCCCTTEEEEEEEEHHHHHHT
T ss_pred CC--CcEEEEEEEEEEeCCCCC---CCCCCCCeeeEEEecHHHHhhh
Confidence 21 124556778886543221 1334578999999999999886
No 34
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.55 E-value=7.1e-14 Score=132.76 Aligned_cols=116 Identities=19% Similarity=0.215 Sum_probs=78.4
Q ss_pred EEEEEEEEec--CCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCc--eEEEEEEEe-e
Q 004451 12 RTVNAWIFAE--STQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDA--FEFVFTFLQ-Q 86 (753)
Q Consensus 12 ~aV~v~V~~~--~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~--L~~l~~~~~-~ 86 (753)
.+|.++++.. ++++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+++.... +..+..+.. .
T Consensus 6 ~~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 79 (149)
T 3son_A 6 FQVLVIPFIKTEANYQFGVLHRTD-----ADVWQFV-AGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFH 79 (149)
T ss_dssp CEEEEEEEEECSSSEEEEEEEESS-----SSCEECE-EEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGG
T ss_pred eEEEEEEEEecCCCeEEEEEEEcC-----CCCEeCC-ccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeeccccee
Confidence 3566666521 456999999965 2999999 999999999999999999999999976531 122222211 1
Q ss_pred eecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 87 NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 87 ~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
..+++ ..+...++|.+...... ..+.+ ++|+.+++|++++++.++..
T Consensus 80 ~~~~~---~~~~~~~~f~~~~~~~~--~~~~~-~~E~~~~~W~~~~el~~~~~ 126 (149)
T 3son_A 80 FSFNK---PYVVPEYCFAIDLTSCS--YQVTL-SLEHSELRWVSYESAIQLLE 126 (149)
T ss_dssp TCSSS---CSEEEEEEEEEECTTTG--GGCCC-CTTEEEEEEECHHHHHHHCC
T ss_pred eccCC---ceEeEEEEEEEEcCCCC--CcccC-CCceeeEEEeCHHHHHHHhc
Confidence 11121 13556678888654211 12344 47999999999999988653
No 35
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.55 E-value=2.9e-14 Score=135.24 Aligned_cols=110 Identities=22% Similarity=0.317 Sum_probs=81.0
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
++.+.++|++ .+++|||++|... ..++|.|.+| ||++++||++.+||.||+.||||+.+.... .++.+.+.. +
T Consensus 21 ~~~~~~~i~~-~~~~vLl~~r~~~-~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~--~~~~~~~~~--~ 93 (153)
T 3ees_A 21 WIPVVAGFLR-KDGKILVGQRPEN-NSLAGQWEFP-GGKIENGETPEEALARELNEELGIEAEVGE--LKLACTHSY--G 93 (153)
T ss_dssp EEEEEEEEEE-ETTEEEEEECCTT-STTTTCEECS-EEECCTTCCHHHHHHHHHHHHHSCEEECCC--EEEEEEEEE--T
T ss_pred eEEEEEEEEE-ECCEEEEEEeCCC-CCCCCeEECC-ceeeCCCCCHHHHHHHHHHHHHCCccccCc--eEEEEEEec--C
Confidence 5566666666 5789999999764 4689999999 999999999999999999999999976544 333333322 2
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
+ .+...++|.+..... .+++.|+.+++|++++++.++
T Consensus 94 ~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 94 D----VGILILFYEILYWKG------EPRAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp T----EEEEEEEEEECEEES------CCCCSSSSEEEEECGGGGGGS
T ss_pred C----CeEEEEEEEEEECCC------CcCCCccceEEEecHHHhhhC
Confidence 2 234456777754332 234568889999999999764
No 36
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.54 E-value=4.7e-14 Score=131.98 Aligned_cols=112 Identities=25% Similarity=0.320 Sum_probs=81.6
Q ss_pred CceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeee
Q 004451 9 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 88 (753)
Q Consensus 9 ~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~ 88 (753)
+.|+.+.++|++ ++++|||++|... ..++|.|++| ||+++.||++.+||+||+.||||+.+.. +..++.+.+..
T Consensus 6 ~~~~~~~~~ii~-~~~~vLl~~r~~~-~~~~g~w~lP-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~--~~~~~~~~~~~- 79 (140)
T 2rrk_A 6 MKMIEVVAAIIE-RDGKILLAQRPAQ-SDQAGLWEFA-GGKVEPDESQRQALVRELREELGIEATV--GEYVASHQREV- 79 (140)
T ss_dssp SCEEEEEEEEEE-ETTEEEEEECCSS-CSCCCCEECC-EEECCTTSCHHHHHHHHHHHHSCEEEEC--CEEEEEEEEEE-
T ss_pred CccceEEEEEEE-cCCEEEEEEcCCC-CCCCCEEECC-ceecCCCCCHHHHHHHHHHHHHCCeeec--ccEEEEEEEec-
Confidence 346666666666 5789999999654 3578999999 9999999999999999999999999654 45566554432
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 89 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 89 ~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
++ .+...++|.+..... .+...|+.++.|++++++.++
T Consensus 80 -~~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 117 (140)
T 2rrk_A 80 -SG----RIIHLHAWHVPDFHG------TLQAHEHQALVWCSPEEALQY 117 (140)
T ss_dssp -TT----EEEEEEEEEESEEEE------CCCCSSCSCEEEECHHHHTTS
T ss_pred -CC----cEEEEEEEEEEeeCC------CcCCCccceeEEeCHHHHhhC
Confidence 21 234556777654321 123467889999999999764
No 37
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.53 E-value=4.3e-14 Score=132.67 Aligned_cols=116 Identities=16% Similarity=0.115 Sum_probs=82.0
Q ss_pred CccccccCCceEEEEEEEEec-CCCE--EEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCce
Q 004451 1 MSEVHRVGDYHRTVNAWIFAE-STQE--LLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF 77 (753)
Q Consensus 1 ~~~vh~~g~~h~aV~v~V~~~-~~g~--VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L 77 (753)
|+-. ... .+.+|+++|++. ++|+ |||++|... ++.|.+| ||++++|||+.+||+||+.||||+.+.. .
T Consensus 1 ~~~~-y~~-p~~~v~~vi~~~~~~~~~~vLl~~r~~~----~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~ 71 (139)
T 2yyh_A 1 MGFN-VKT-PLLATDVIIRLWDGENFKGIVLIERKYP----PVGLALP-GGFVEVGERVEEAAAREMREETGLEVRL--H 71 (139)
T ss_dssp -CCC-CCC-CEEEEEEEEEEEETTEEEEEEEEEECSS----SCSEECC-EEECCTTCCHHHHHHHHHHHHHCCCCEE--E
T ss_pred CCcc-ccC-CeEEEEEEEEEEcCCCcEEEEEEEecCC----CCcEECc-cccCCCCCCHHHHHHHHHHHHHCCCccc--c
Confidence 4445 333 467777777652 3567 999999652 3559999 9999999999999999999999999643 4
Q ss_pred EEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHH
Q 004451 78 EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 135 (753)
Q Consensus 78 ~~l~~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~ 135 (753)
..++.+.+....+ ..+.+.++|.+...+. +. .++|+.+++|+++++++
T Consensus 72 ~~~~~~~~~~~~~----~~~~~~~~f~~~~~~~-----~~-~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 72 KLMGVYSDPERDP----RAHVVSVVWIGDAQGE-----PK-AGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp EEEEEECCTTSCT----TSCEEEEEEEEEEESC-----CC-CCTTEEEEEEECTTSCC
T ss_pred eEEEEECCCCcCC----CceEEEEEEEEecCCc-----cC-CCCCcceEEEEEHHHCC
Confidence 4555554322111 2366778888876322 12 35689999999999997
No 38
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.53 E-value=2e-14 Score=138.40 Aligned_cols=114 Identities=21% Similarity=0.215 Sum_probs=80.8
Q ss_pred CceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEE--------
Q 004451 9 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV-------- 80 (753)
Q Consensus 9 ~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l-------- 80 (753)
..|.+|.++|++ +++|||+||.. +|.|.+| ||++++|||+.+||+||++||||+++....+..+
T Consensus 4 ~~~~~v~~vi~~--~~~vLL~~r~~-----~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 75 (159)
T 3f6a_A 4 NRHFTVSVFIVC--KDKVLLHLHKK-----AKKMLPL-GGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDL 75 (159)
T ss_dssp CSCEEEEEEEEE--TTEEEEEECSS-----SCCEECE-EEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
T ss_pred cceEEEEEEEEE--CCEEEEEEcCC-----CCeEECC-ccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccccc
Confidence 358999999998 68999999853 5899999 9999999999999999999999998654322110
Q ss_pred ---EEEEe-----eeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 81 ---FTFLQ-----QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 81 ---~~~~~-----~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
..+.. ....+. ..+.+..+|.+..... .+.++++|+.+++|+++++++++
T Consensus 76 ~~~~~~~~p~~~~~~~~~~---~~~~~~~~f~~~~~~~----~~~~~~~E~~~~~W~~~~el~~~ 133 (159)
T 3f6a_A 76 SGEKLLINPIHTILGDVSP---NHSHIDFVYYATTTSF----ETSPEIGESKILKWYSKEDLKNA 133 (159)
T ss_dssp TTCEEECCCSEEEEECSSS---SSCEEEEEEEEECSCS----CCCCCTTSCCCEEEECSSSSTTC
T ss_pred cccccccCccccccccCCC---CceEEEEEEEEEeCCC----CcCCCCCcccceEEeeHHHHhhC
Confidence 00000 000011 1235667788865432 23455689999999999999764
No 39
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.52 E-value=1.9e-14 Score=136.77 Aligned_cols=116 Identities=22% Similarity=0.195 Sum_probs=77.7
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCC
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 91 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~ 91 (753)
.+|.+++++ .+++|||.++...+ ..++.|.+| ||++++|||+.+||+||++||||+++. .+..++.+.. .++
T Consensus 6 ~~v~vi~~~-~~~~vLLv~~~r~~-~~~~~w~~P-gG~ve~gEt~~~aa~REl~EEtGl~~~--~~~~l~~~~~---~~~ 77 (145)
T 2w4e_A 6 RAVFILPVT-AQGEAVLIRQFRYP-LRATITEIV-AGGVEKGEDLGAAAARELLEEVGGAAS--EWVPLPGFYP---QPS 77 (145)
T ss_dssp EEEEEEEEE-TTSEEEEEEEEETT-TTEEEEECE-EEECCTTCCHHHHHHHHHHHHHCEECS--EEEECCCBBS---CTT
T ss_pred CEEEEEEEc-CCCEEEEEEEEecC-CCCCEEEeC-CccCCCCCCHHHHHHHHHHHhhCCccC--eEEEEecCcC---CCC
Confidence 578888888 67899876543322 245699999 999999999999999999999999853 3455544321 111
Q ss_pred CcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004451 92 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 92 g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
......++|++..... .....+++|+.+++|++++++.+++.++
T Consensus 78 ---~~~~~~~~f~~~~~~~---~~~~~~~~E~~~~~w~~~~el~~~~~~~ 121 (145)
T 2w4e_A 78 ---ISGVVFYPLLALGVTL---GAAQLEDTETIERVVLPLAEVYRMLEAG 121 (145)
T ss_dssp ---TCCCEEEEEEEEEEEE---C--------CEEEEEEEHHHHHHHHHHT
T ss_pred ---ccCceEEEEEEEeccc---CCCCCCCCCeEEEEEEeHHHHHHHHHcC
Confidence 1234567777763221 1234566799999999999999988754
No 40
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.52 E-value=6e-14 Score=132.51 Aligned_cols=116 Identities=16% Similarity=0.177 Sum_probs=81.0
Q ss_pred ceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeec
Q 004451 10 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 89 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~ 89 (753)
.+.++.++|++.++++|||+||. +|.|.+| ||++++||++.+||+||+.||||+.+.. +..++.+......
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~~~ 87 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAP------NGAYFLP-GGEIEGTETKEEAIHREVLEELGISVEI--GCYLGEADEYFYS 87 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECT------TSCEECS-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEEEE
T ss_pred eeeEEEEEEECCCCCeEEEEEcC------CCCEeCC-CcccCCCCCHHHHHHHHHHHHhCCeeEe--eeEEEEEEEEEcC
Confidence 35778888888336899999973 3899999 9999999999999999999999999643 4445544311111
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 90 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 90 ~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
+.+....+...++|.+...... ....+|+.+++|++++++.+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~~~ 132 (148)
T 2azw_A 88 NHRQTAYYNPGYFYVANTWRQL-----SEPLERTNTLHWVAPEEAVRLLK 132 (148)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEC-----SSCC-CCSEEEEECHHHHHHHBS
T ss_pred CCCCcceEEEEEEEEEEcCcCC-----cCCCCceeeEEEeeHHHHHhhhc
Confidence 1111123456677877654322 12336788999999999988754
No 41
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.51 E-value=5.6e-14 Score=136.97 Aligned_cols=114 Identities=21% Similarity=0.324 Sum_probs=81.0
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCC
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 91 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~ 91 (753)
.+|.+++++ +++|||.+|...+ .++|.|.+| ||++++|||+.+||+||+.||||+ +. .+..++.+... ++
T Consensus 35 ~~v~vii~~--~~~vLL~~~~r~~-~~~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl-~~--~~~~l~~~~~~---~~ 104 (170)
T 1v8y_A 35 PAVAVIALR--EGRMLFVRQMRPA-VGLAPLEIP-AGLIEPGEDPLEAARRELAEQTGL-SG--DLTYLFSYFVS---PG 104 (170)
T ss_dssp CEEEEEEEE--TTEEEEEECCBTT-TTBCCBBCS-EEECCTTCCHHHHHHHHHHHHHSE-EE--EEEEEEEEESC---TT
T ss_pred CeEEEEEEE--CCEEEEEEEEeCC-CCCCEEECC-ccccCCCCCHHHHHHHHHHHHHCC-Cc--CceeeEEEecC---CC
Confidence 378888887 6899998875433 578999999 999999999999999999999999 54 36666665321 11
Q ss_pred CcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004451 92 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 92 g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
..+...++|++...... ....+++|+.++.|++++++.+++..+
T Consensus 105 ---~~~~~~~~f~~~~~~~~---~~~~~~~E~~~~~W~~~~el~~~~~~~ 148 (170)
T 1v8y_A 105 ---FTDEKTHVFLAENLKEV---EAHPDEDEAIEVVWMRPEEALERHQRG 148 (170)
T ss_dssp ---TBCCEEEEEEEEEEEEC---C--------CEEEEECHHHHHHHHHTT
T ss_pred ---ccccEEEEEEEEecccc---CCCCCCCceEEEEEEEHHHHHHHHHCC
Confidence 12346677888653321 124456789999999999999998865
No 42
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.51 E-value=5.2e-14 Score=140.19 Aligned_cols=116 Identities=16% Similarity=0.085 Sum_probs=80.8
Q ss_pred CCceEEEEEEEEecCCC--EEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEe
Q 004451 8 GDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 85 (753)
Q Consensus 8 g~~h~aV~v~V~~~~~g--~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~ 85 (753)
+..+.++.+++ + .++ +|||++|+..+..++|.|++| ||++++|||+.+||+||++||||+++. .+..++.+.+
T Consensus 32 ~~~~~~~~v~i-~-~~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~~~ 106 (194)
T 1nqz_A 32 HYRRAAVLVAL-T-READPRVLLTVRSSELPTHKGQIAFP-GGSLDAGETPTQAALREAQEEVALDPA--AVTLLGELDD 106 (194)
T ss_dssp -CEEEEEEEEE-E-SSSSCBBCEEEEC------CCCEECS-EEECCTTCCHHHHHHHHHHHHHCCCGG--GCEEEEECCC
T ss_pred CCceEEEEEEE-e-cCCCeEEEEEEecCCCCCCCCeEECC-cccCCCCCCHHHHHHHHHHHHHCCCcc--ceEEEEEccC
Confidence 34444454444 6 566 899999977656689999999 999999999999999999999999965 3566666654
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCcC-ccCCccceeeEEEeCHHHH-HhH
Q 004451 86 QNVINDGKFINNEFADVYLVTTLNPIPLEA-FTLQQTEVSAVKYIAYEEY-KNL 137 (753)
Q Consensus 86 ~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~-~~~~~~Ev~e~~Wvs~~El-~~l 137 (753)
.... .+...++|++..... .. ...+++|+.++.|++++++ ++.
T Consensus 107 ~~~~------~~~~~~~f~~~~~~~---~~~~~~~~~E~~~~~W~~~~el~~~~ 151 (194)
T 1nqz_A 107 VFTP------VGFHVTPVLGRIAPE---ALDTLRVTPEVAQIITPTLAELRAVP 151 (194)
T ss_dssp EEET------TTEEEEEEEEEECGG---GGGGCCCCTTEEEEECCBHHHHHHSC
T ss_pred ccCC------CCeEEEEEEEEecCC---ccccCCCccceeEEEEEEHHHhccCC
Confidence 3321 134567788876421 11 2456679999999999999 764
No 43
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.51 E-value=1.2e-13 Score=134.26 Aligned_cols=118 Identities=17% Similarity=0.247 Sum_probs=84.3
Q ss_pred CceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEee--
Q 004451 9 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ-- 86 (753)
Q Consensus 9 ~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~-- 86 (753)
.+|.+|.++|++ .+++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+++.. +..++++.+.
T Consensus 6 ~~~~~v~~~i~~-~~~~vLl~~r~~-----~~~w~~p-~G~~e~gE~~~~aa~RE~~EE~G~~~~~--~~~~~~~~~~~~ 76 (164)
T 2kdv_A 6 GYRPNVGIVICN-RQGQVMWARRFG-----QHSWQFP-QGGINPGESAEQAMYRELFEEVGLSRKD--VRILASTRNWLR 76 (164)
T ss_dssp SEEEEEEEEEEC-TTSEEEEEEETT-----CCCEECC-EEECCTTCCHHHHHHHHHHHHHCCCGGG--EEEEEECSSCEE
T ss_pred CCCcEEEEEEEc-cCCEEEEEEEcC-----CCeEECC-eeecCCCCCHHHHHHHHHHHHHCCCccc--eEEEEEecceeE
Confidence 578999999998 678999999853 5899999 9999999999999999999999999653 5666664311
Q ss_pred eecCCCc-------ccceEEEEEEEEEEeCCCCCcCccCC---ccceeeEEEeCHHHHHhH
Q 004451 87 NVINDGK-------FINNEFADVYLVTTLNPIPLEAFTLQ---QTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 87 ~~~~~g~-------~~~~~i~~vy~a~~~~~~~~~~~~~~---~~Ev~e~~Wvs~~El~~l 137 (753)
...++.. .......++|.+....... .+.++ ..|+.+++|++++++.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~--~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 77 YKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDA--EINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp EECCTTTCCTTSSSCCCEEEEEEEEEEESSCGG--GCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred EecCcceeeeccCcccccceeEEEEEEecCCcc--ccccCCCCCchhceEEEecHHHhhhh
Confidence 1111110 0123355777777644321 12332 358999999999988654
No 44
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.51 E-value=5.9e-14 Score=138.04 Aligned_cols=111 Identities=19% Similarity=0.210 Sum_probs=81.2
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
++++.++|++ ++++|||++|.. ..++|.|.+| ||++++||++.+||+||+.||||+++. .+..++.+.+...
T Consensus 24 ~~~~~~~vi~-~~~~vLL~~r~~--~~~~g~W~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~~~~~~-- 95 (176)
T 3q93_A 24 SRLYTLVLVL-QPQRVLLGMKKR--GFGAGRWNGF-GGKVQEGETIEDGARRELQEESGLTVD--ALHKVGQIVFEFV-- 95 (176)
T ss_dssp EEEEEEEEEE-CSSEEEEEEECS--STTTTSEECE-EEECCTTSCHHHHHHHHHHHHHSCEES--CCEEEEEEEEEET--
T ss_pred CcEEEEEEEE-eCCEEEEEEEcC--CCCCCeEECc-eecCCCCCCHHHHHHHHHHHHHCCcce--eeEEEEEEEEEcC--
Confidence 4555556666 578999999854 3478999999 999999999999999999999999975 3566776655432
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
+. ..+...++|.+..... .+.+.|..+++|+++++++.+
T Consensus 96 ~~--~~~~~~~~f~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 134 (176)
T 3q93_A 96 GE--PELMDVHVFCTDSIQG------TPVESDEMRPCWFQLDQIPFK 134 (176)
T ss_dssp TC--SCEEEEEEEEESCEES------CCCCCSSEEEEEEETTCCCGG
T ss_pred CC--CcEEEEEEEEEECCCC------CcCCCcceeeEEeeHHHcccc
Confidence 11 2355667777753222 223356677899999999754
No 45
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.50 E-value=6.2e-14 Score=133.90 Aligned_cols=113 Identities=20% Similarity=0.348 Sum_probs=80.9
Q ss_pred CceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeee
Q 004451 9 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 88 (753)
Q Consensus 9 ~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~ 88 (753)
.++.++.++|++ +++|||++| +|.|.+| ||++++||++.+||+||+.||||+++... ..++.+.+...
T Consensus 17 ~~~~~~~~ii~~--~~~vLl~~r-------~~~w~lP-gG~ve~gE~~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~~ 84 (154)
T 2pqv_A 17 VFGVRATALIVQ--NHKLLVTKD-------KGKYYTI-GGAIQVNESTEDAVVREVKEELGVKAQAG--QLAFVVENRFE 84 (154)
T ss_dssp EEEEEEEECCEE--TTEEEEEEE-------TTEEECE-EEECBTTCCHHHHHHHHHHHHHCCCEEEE--EEEEEEEEEEE
T ss_pred eEeEEEEEEEEE--CCEEEEEec-------CCeEECc-ccCcCCCCCHHHHHHHHHHHHhCCeeeec--eEEEEEeeeec
Confidence 457888888887 689999998 4889998 99999999999999999999999996543 33333333222
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 89 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 89 ~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
..+ ...+.+.++|.+......+. ....++|+.+++|++++++.++
T Consensus 85 ~~~--~~~~~~~~~f~~~~~~~~~~--~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 85 VDG--VSYHNIEFHYLVDLLEDAPL--TMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp ETT--EEEEEEEEEEEEEESSCCCS--EEEETTEEEEEEEEEGGGGGGS
T ss_pred CCC--CcceEEEEEEEEEecCCCCc--ccCCCCceeeEEEeEHHHHhhc
Confidence 121 12355667788876443210 0123467889999999999764
No 46
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.50 E-value=3.2e-14 Score=142.54 Aligned_cols=113 Identities=19% Similarity=0.284 Sum_probs=77.5
Q ss_pred EEEEEEEE-ecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 12 RTVNAWIF-AESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 12 ~aV~v~V~-~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
..+.++|+ +.++++|||++|.. .+|.|.+| ||++++|||+.+||+||++||||+++.. +..++.+...
T Consensus 41 ~~~~~vi~~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEt~~eaa~REl~EEtGl~~~~--~~~l~~~~~~---- 109 (194)
T 2fvv_A 41 KRAACLCFRSESEEEVLLVSSSR----HPDRWIVP-GGGMEPEEEPSVAAVREVCEEAGVKGTL--GRLVGIFENQ---- 109 (194)
T ss_dssp EEEEEEEESSTTCCEEEEEECSS----CTTSEECS-EEECCTTCCHHHHHHHHHHHHHCEEEEE--EEEEEEEEET----
T ss_pred ccEEEEEEEECCCCEEEEEEEeC----CCCcEECC-CCcCCCCcCHHHHHHHHHHHHhCCcccc--ceEEEEEEcC----
Confidence 33455555 32467999999854 35899999 9999999999999999999999998643 5566666532
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
.. ....++|++....... .......+..+++|++++++++++.++
T Consensus 110 ~~----~~~~~~f~~~~~~~~~--~~~~~~e~~~~~~W~~~~el~~~l~~~ 154 (194)
T 2fvv_A 110 ER----KHRTYVYVLIVTEVLE--DWEDSVNIGRKREWFKIEDAIKVLQYH 154 (194)
T ss_dssp TT----TEEEEEEEEEEEEECS--SCHHHHHHCCCEEEEEHHHHHHHHTTT
T ss_pred CC----ceEEEEEEEEEccccC--CCCCcccccceEEEEEHHHHHHHHhcC
Confidence 11 2245677776432211 111111244689999999999987755
No 47
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.50 E-value=4.2e-14 Score=135.11 Aligned_cols=112 Identities=21% Similarity=0.258 Sum_probs=79.1
Q ss_pred CCceEEEEEEEEecCCCE----EEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEE
Q 004451 8 GDYHRTVNAWIFAESTQE----LLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF 83 (753)
Q Consensus 8 g~~h~aV~v~V~~~~~g~----VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~ 83 (753)
...+.++.++|++ +++ |||++|...+ ++| |.+| ||++++|||+.+||+||+.||||+++.. ...++.+
T Consensus 5 ~~~~~~~~~ii~~--~~~~~~~vLl~~r~~~~--~~g-w~lP-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~ 76 (155)
T 2b06_A 5 QLTILTNICLIED--LETQRVVMQYRAPENNR--WSG-YAFP-GGHVENDEAFAESVIREIYEETGLTIQN--PQLVGIK 76 (155)
T ss_dssp GCEEEEEEEEEEE--TTTTEEEEEEEC-------CCE-EECC-CCBCCTTSCHHHHHHHHHHHHHSEEEES--CEEEEEE
T ss_pred cCcEEEEEEEEEE--CCCCeEEEEEEECCCCC--CCC-Eecc-ceecCCCCCHHHHHHHHHHHHhCccccC--CcEEEEE
Confidence 4468889999988 444 8999887643 678 9998 9999999999999999999999999764 3445544
Q ss_pred EeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004451 84 LQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 138 (753)
Q Consensus 84 ~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~ 138 (753)
.+.. +.+ .+...++|.+..... .+.+.|+.+++|++++++.++.
T Consensus 77 ~~~~--~~~---~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~~ 120 (155)
T 2b06_A 77 NWPL--DTG---GRYIVICYKATEFSG------TLQSSEEGEVSWVQKDQIPNLN 120 (155)
T ss_dssp EEEC--TTS---CEEEEEEEEECEEEE------CCCCBTTBEEEEEEGGGGGGSC
T ss_pred eecc--CCC---ceEEEEEEEEEecCC------CCCCCcceeeEEeeHHHhhhCC
Confidence 4332 111 355677777754322 1233678899999999997653
No 48
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.50 E-value=1.3e-13 Score=138.17 Aligned_cols=117 Identities=18% Similarity=0.188 Sum_probs=78.0
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
..+|.++|++.++++|||+||.. +++|.|.+| ||++++||++.+||+||++||||+++.. ..+..+......+
T Consensus 26 ~v~v~~~v~~~~~~~vLL~~r~~---~~~g~w~lP-GG~ve~gEs~~~aA~REl~EEtGl~~~~---~~l~~~~~~~~~~ 98 (199)
T 3h95_A 26 QVGVAGAVFDESTRKILVVQDRN---KLKNMWKFP-GGLSEPEEDIGDTAVREVFEETGIKSEF---RSVLSIRQQHTNP 98 (199)
T ss_dssp CCEEEEEEEETTTTEEEEEEESS---SSTTSBBCC-EEECCTTCCHHHHHHHHHHHHHCCCEEE---EEEEEEEECC---
T ss_pred cceEEEEEEeCCCCEEEEEEEcC---CCCCCEECC-ccccCCCCCHHHHHHHHHHHHhCCcccc---ceEEEEEeeecCC
Confidence 46788888884568999999854 358999999 9999999999999999999999999653 2232222212222
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
++ ......+|.+...... ....++++|+.+++|++++++.++..
T Consensus 99 ~~---~~~~~~~~~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~~ 142 (199)
T 3h95_A 99 GA---FGKSDMYIICRLKPYS--FTINFCQEECLRCEWMDLNDLAKTEN 142 (199)
T ss_dssp ---------CEEEEEEEEESC--CCCCCCTTTEEEEEEEEHHHHHHCSS
T ss_pred CC---ceeEEEEEEEEEcCCC--cccCCCccceeeeEEEeHHHHhhhhh
Confidence 21 1122233444332211 12355678999999999999987643
No 49
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.50 E-value=1.1e-13 Score=134.56 Aligned_cols=117 Identities=13% Similarity=0.238 Sum_probs=78.3
Q ss_pred cCCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEee
Q 004451 7 VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ 86 (753)
Q Consensus 7 ~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~ 86 (753)
....+..|.++|++ +++|||+||... +|.|.+| ||++++||++.+||+||++||||+++.. ...++.+.+.
T Consensus 19 ~~~~~~~v~~ii~~--~~~vLL~~r~~~----~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~~~ 89 (171)
T 3id9_A 19 ENIMQVRVTGILIE--DEKVLLVKQKVA----NRDWSLP-GGRVENGETLEEAMIREMREETGLEVKI--KKLLYVCDKP 89 (171)
T ss_dssp ---CEEEEEEEEEE--TTEEEEEECSST----TCCEECC-EEECCTTCCHHHHHHHHHHHHHCCCEEE--EEEEEEEEET
T ss_pred CCceEEEEEEEEEE--CCEEEEEEEECC----CCeEECC-CccCCCCCCHHHHHHHHHHHHHCCcccc--ceEEEEEccc
Confidence 44567888888887 689999998652 7999999 9999999999999999999999999643 3444444432
Q ss_pred eecCCCcccceEEEEEEEEEEeCCCC-CcCccCCccceeeEEEeCHHHHHhHH
Q 004451 87 NVINDGKFINNEFADVYLVTTLNPIP-LEAFTLQQTEVSAVKYIAYEEYKNLL 138 (753)
Q Consensus 87 ~~~~~g~~~~~~i~~vy~a~~~~~~~-~~~~~~~~~Ev~e~~Wvs~~El~~l~ 138 (753)
.. ..+....+|.+....... .....++++|+.+++|++++++.++.
T Consensus 90 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 136 (171)
T 3id9_A 90 DA------SPSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYG 136 (171)
T ss_dssp TS------SSCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGT
T ss_pred CC------CCcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCC
Confidence 21 123444556665433211 11112355789999999999998754
No 50
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.48 E-value=3.4e-14 Score=139.91 Aligned_cols=117 Identities=20% Similarity=0.218 Sum_probs=86.3
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCC
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 91 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~ 91 (753)
.+|.+++++ .+++|||++|... ..++|.|++| ||++++|||+.+||+||+.||||+.+. .+..++.+.. .++
T Consensus 42 ~~v~v~i~~-~~~~vLL~~r~~~-~~~~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~~~---~~~ 113 (182)
T 2yvp_A 42 AASFVLPVT-ERGTALLVRQYRH-PTGKFLLEVP-AGKVDEGETPEAAARRELREEVGAEAE--TLIPLPSFHP---QPS 113 (182)
T ss_dssp EEEEEEEBC-TTSEEEEEEEEEG-GGTEEEEECC-EEECCTTCCHHHHHHHHHHHHHCEECS--CEEECCCBCS---CTT
T ss_pred CEEEEEEEc-CCCEEEEEEeccC-CCCCcEEEec-cccCCCCcCHHHHHHHHHHHHhCCCcc--cEEEEEEEeC---CCC
Confidence 578888887 6789999988653 2467899999 999999999999999999999999864 3555554421 111
Q ss_pred CcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004451 92 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 92 g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
..+...++|++...... .....+++|+.++.|++++++.+++..+
T Consensus 114 ---~~~~~~~~f~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 114 ---FTAVVFHPFLALKARVV--TPPTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp ---TBCCEEEEEEECSCEEC--SCCCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred ---ccccEEEEEEEeccccC--CCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 12446677877532111 1234567899999999999999998754
No 51
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.47 E-value=1.4e-13 Score=138.89 Aligned_cols=114 Identities=18% Similarity=0.267 Sum_probs=81.1
Q ss_pred ceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeec
Q 004451 10 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 89 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~ 89 (753)
.+.+|.++|++ +++|||+||.. +|.|.+| ||++++|||+.+||+||++||||+++.. ...++.+......
T Consensus 67 ~~~~v~~vv~~--~~~vLLv~r~~-----~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~v~~--~~~l~~~~~~~~~ 136 (205)
T 3q1p_A 67 PKVDIRAVVFQ--NEKLLFVKEKS-----DGKWALP-GGWADVGYTPTEVAAKEVFEETGYEVDH--FKLLAIFDKEKHQ 136 (205)
T ss_dssp CEEEEEEEEEE--TTEEEEEEC--------CCEECS-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEHHHHS
T ss_pred CcceEEEEEEE--CCEEEEEEEcC-----CCcEECC-cCccCCCCCHHHHHHHHHHHHHCCcccc--ceEEEEEeccccC
Confidence 35778888887 68999999852 5899999 9999999999999999999999999653 4445544432211
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 90 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 90 ~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
..+ ...+.+.++|.+...... +..+ .|+.+++|+++++++++..
T Consensus 137 ~~~-~~~~~~~~~~~~~~~~~~----~~~~-~E~~~~~w~~~~el~~l~~ 180 (205)
T 3q1p_A 137 PSP-SATHVYKIFIGCEIIGGE----KKTS-IETEEVEFFGENELPNLSI 180 (205)
T ss_dssp CCC-CSSCEEEEEEEEEEEEEC----CCCC-TTSCCEEEECTTSCCCBCT
T ss_pred CCC-CCceEEEEEEEEEecCCc----cCCC-CcceEEEEEeHHHhhhcCC
Confidence 111 134566677777654321 2333 7899999999999976543
No 52
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.45 E-value=1.2e-13 Score=140.93 Aligned_cols=124 Identities=19% Similarity=0.193 Sum_probs=87.0
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCC------------------------------CCCCCCeeecccccCCC-CCCHHHH
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFK------------------------------DSWPGMWDISSAGHISA-GDSSLIS 59 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k------------------------------~~~pG~W~lP~GG~Ve~-gEs~~~A 59 (753)
|.+|.+++++.++++|||+|+.+.. ...++.|++| ||++++ |||+.+|
T Consensus 36 ~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welP-gG~ve~~gEs~~ea 114 (218)
T 3q91_A 36 HDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELC-AGLVDQPGLSLEEV 114 (218)
T ss_dssp CCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECE-EEECCSSSCCHHHH
T ss_pred CCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECC-cceeCCCCCCHHHH
Confidence 6789999998556789887653211 1116799999 999999 9999999
Q ss_pred HHHHHHHHHCCccCCCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCC--CcCccCCccceeeEEEeCHHHHHhH
Q 004451 60 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP--LEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 60 A~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~--~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
|+||++||||+.+....+..++++... + + ......++|++....... .....++++|+.++.|++++|+.++
T Consensus 115 A~REl~EEtGl~~~~~~l~~l~~~~~~---~-g--~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ev~wv~l~el~~~ 188 (218)
T 3q91_A 115 ACKEAWEECGYHLAPSDLRRVATYWSG---V-G--LTGSRQTMFYTEVTDAQRSGPGGGLVEEGELIEVVHLPLEGAQAF 188 (218)
T ss_dssp HHHHHHHHHCBCCCGGGCEEEEEEEEC---------CCEEEEEEEEEECGGGBCC---------CCEEEEEEEGGGHHHH
T ss_pred HHHHHHHHhCCccccCceEEEEEEecC---C-C--ccceEEEEEEEEECCcccccCCCCCCCCCcEEEEEEEEHHHHHHH
Confidence 999999999999754567888876432 1 1 124567888887643211 1123466789999999999999999
Q ss_pred HhcC
Q 004451 138 LAKD 141 (753)
Q Consensus 138 ~~~~ 141 (753)
+.++
T Consensus 189 i~~g 192 (218)
T 3q91_A 189 ADDP 192 (218)
T ss_dssp HHCT
T ss_pred HHcC
Confidence 9865
No 53
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.45 E-value=6.4e-14 Score=141.75 Aligned_cols=122 Identities=15% Similarity=0.278 Sum_probs=78.5
Q ss_pred ccccCCceEEEEEEEEecCCCEEEEEEeCCCCC--CCCCCeee-cccccCCCCCC--H----HHHHHHHHHHHHCCccCC
Q 004451 4 VHRVGDYHRTVNAWIFAESTQELLLQRRADFKD--SWPGMWDI-SSAGHISAGDS--S----LISAQRELQEELGINLPK 74 (753)
Q Consensus 4 vh~~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~--~~pG~W~l-P~GG~Ve~gEs--~----~~AA~REl~EEtGl~v~~ 74 (753)
+...+.++..+..+|+. .+|+|||++|...+. .++|.|.+ | ||+|++||| + .+||+||++||||+++..
T Consensus 60 ~e~d~~~~q~i~~~II~-~~grvLl~~R~~~~~e~~~~g~w~~gP-GGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~ 137 (211)
T 3e57_A 60 AEYDETTKQVIPYVVIM-DGDRVLITKRTTKQSEKRLHNLYSLGI-GGHVREGDGATPREAFLKGLEREVNEEVDVSLRE 137 (211)
T ss_dssp HTTCTTEEEEEEEEEEE-ETTEEEEEEC------------CBSSE-ECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cccCCcccceEEEEEEE-ECCEEEEEEECCCCCcccccCCccccc-ceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeec
Confidence 44455566555555555 478999999976542 26789999 7 999999999 4 999999999999998543
Q ss_pred CceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 75 DAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 75 ~~L~~l~~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
+..++.+.+... +.+ ...+..+|.+..... .+.+.|+.+++|+++++|+++..
T Consensus 138 --~~~ig~~~~~~~-~~~---~~~l~~~f~~~~~~g------~~~~~E~~~~~W~~~~eL~~~~~ 190 (211)
T 3e57_A 138 --LEFLGLINSSTT-EVS---RVHLGALFLGRGKFF------SVKEKDLFEWELIKLEELEKFSG 190 (211)
T ss_dssp --EEEEEEEECCSS-HHH---HTEEEEEEEEEEEEE------EESCTTTCEEEEEEHHHHHHHGG
T ss_pred --cEEEEEEeccCC-CCC---eEEEEEEEEEEeCCc------eeCCCCeEEEEEEEHHHHHHhHh
Confidence 555655543211 111 123455787765421 34456778999999999998754
No 54
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.44 E-value=4.6e-13 Score=135.58 Aligned_cols=122 Identities=19% Similarity=0.184 Sum_probs=83.6
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCC----CCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEee
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKD----SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ 86 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~----~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~ 86 (753)
+.+|.+++++.++++|||.++.+.+. +.++.|++| ||++++||++.+||+||++||||+.+ ..+..++++. .
T Consensus 57 ~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welP-gG~ve~gE~~~~aA~REl~EEtGl~~--~~~~~l~~~~-~ 132 (209)
T 1g0s_A 57 GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMV-AGMIEEGESVEDVARREAIEEAGLIV--KRTKPVLSFL-A 132 (209)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECE-EEECCTTCCHHHHHHHHHHHHHCCCC--CCEEEEEEEE-S
T ss_pred CCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeC-cccCCCCcCHHHHHHHHHHHHcCccc--CcEEEeEEEe-c
Confidence 35788888884468999865433221 125789999 99999999999999999999999996 3577777763 1
Q ss_pred eecCCCcccceEEEEEEEEEEeCC-CCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004451 87 NVINDGKFINNEFADVYLVTTLNP-IPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 87 ~~~~~g~~~~~~i~~vy~a~~~~~-~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
.++. .....++|++..... ........+++|..++.|++++++.+++.++
T Consensus 133 --~~g~---~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g 183 (209)
T 1g0s_A 133 --SPGG---TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEG 183 (209)
T ss_dssp --CTTT---BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTT
T ss_pred --CCCc---cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 1221 234668888875221 1110113456788899999999999998865
No 55
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.44 E-value=3.7e-13 Score=134.20 Aligned_cols=120 Identities=11% Similarity=0.182 Sum_probs=83.8
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCC----CC-CCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEe
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFK----DS-WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 85 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k----~~-~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~ 85 (753)
+.+|.+++++.++++|||+++...+ .. .++.|++| ||+++ |||+.+||+||+.||||+++ ..+..++.+..
T Consensus 45 ~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lP-gG~ve-gE~~~~aa~REl~EEtG~~~--~~~~~l~~~~~ 120 (191)
T 3o6z_A 45 GNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESC-AGLLD-NDEPEVCIRKEAIEETGYEV--GEVRKLFELYM 120 (191)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECE-EEECC-SSCHHHHHHHHHHHHC-CCC--SCEEEEEEEES
T ss_pred CCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEec-ceEeC-CCCHHHHHHHHHHHHhCCcc--CcEEEEEEEEe
Confidence 4678888888446899998774321 01 56899999 99999 99999999999999999996 35777776532
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCc-CccCCccceeeEEEeCHHHHHhHHhcC
Q 004451 86 QNVINDGKFINNEFADVYLVTTLNPIPLE-AFTLQQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 86 ~~~~~~g~~~~~~i~~vy~a~~~~~~~~~-~~~~~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
. ++ ......++|++......... ...+ ++|+.++.|++++++.+++.++
T Consensus 121 ~---~~---~~~~~~~~f~~~~~~~~~~~~~~~~-~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 121 S---PG---GVTELIHFFIAEYSDNQRANAGGGV-EDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp C---TT---TBCCEEEEEEEECCTTCC---------CCSSEEEEEEHHHHHHHHHHS
T ss_pred C---CC---ccCcEEEEEEEEEcccccccCCCCC-CCcEEEEEEEEHHHHHHHHHcC
Confidence 1 21 12345678888764322110 0122 5789999999999999998754
No 56
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.44 E-value=4.3e-13 Score=141.02 Aligned_cols=105 Identities=16% Similarity=0.305 Sum_probs=79.1
Q ss_pred EEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCCC
Q 004451 13 TVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG 92 (753)
Q Consensus 13 aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~g 92 (753)
+|.++|.+ +++|||+||...+ +|.|++| ||++++|||+++||+||++||||+++. .+..++++.+. ++
T Consensus 142 ~viv~v~~--~~~vLL~rr~~~~---~g~w~lP-gG~vE~GEt~eeAa~REv~EEtGl~v~--~~~~~~~~~~~--~~-- 209 (269)
T 1vk6_A 142 CIIVAIRR--DDSILLAQHTRHR---NGVHTVL-AGFVEVGETLEQAVAREVMEESGIKVK--NLRYVTSQPWP--FP-- 209 (269)
T ss_dssp EEEEEEEE--TTEEEEEEETTTC---SSCCBCE-EEECCTTCCHHHHHHHHHHHHHCCEEE--EEEEEEEEEEE--TT--
T ss_pred EEEEEEEe--CCEEEEEEecCCC---CCcEECC-cCcCCCCCCHHHHHHHHHHHHhCceee--eEEEEEEEecC--CC--
Confidence 44444444 6899999997542 6999998 999999999999999999999999965 35666665432 12
Q ss_pred cccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 93 KFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 93 ~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
+.+.++|.+..... .+.++++|+.+++|++++|++.+
T Consensus 210 ----~~~~~~f~a~~~~~----~~~~~~~E~~~~~W~~~~el~~l 246 (269)
T 1vk6_A 210 ----QSLMTAFMAEYDSG----DIVIDPKELLEANWYRYDDLPLL 246 (269)
T ss_dssp ----EEEEEEEEEEEEEC----CCCCCTTTEEEEEEEETTSCCSC
T ss_pred ----CEEEEEEEEEECCC----CcCCCCcceEEEEEEEHHHhhhc
Confidence 34667888876432 23556679999999999999654
No 57
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.44 E-value=2.8e-13 Score=136.70 Aligned_cols=112 Identities=18% Similarity=0.259 Sum_probs=80.1
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
+.+|.++|++ +++|||+||. +|.|.+| ||++++|||+.+||+||++||||+++.. +..++.+.......
T Consensus 70 ~~~v~~vv~~--~~~vLLvrr~------~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~l~~~~~~~~~~ 138 (206)
T 3o8s_A 70 KLDTRAAIFQ--EDKILLVQEN------DGLWSLP-GGWCDVDQSVKDNVVKEVKEEAGLDVEA--QRVVAILDKHKNNP 138 (206)
T ss_dssp EEEEEEEEEE--TTEEEEEECT------TSCEECS-EEECCTTSCHHHHHHHHHHHHHCEEEEE--EEEEEEEEHHHHCC
T ss_pred CccEEEEEEE--CCEEEEEEec------CCeEECC-eeccCCCCCHHHHHHHHHHHHHCCccee--eeEEEEEeccccCC
Confidence 5788888887 5899999985 5899999 9999999999999999999999998643 44555554221111
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
.+ ...+.+.++|.+...... +..+ .|+.+++|+++++++++..
T Consensus 139 ~~-~~~~~~~~~~~~~~~~~~----~~~~-~E~~~~~w~~~~el~~l~~ 181 (206)
T 3o8s_A 139 AK-SAHRVTKVFILCRLLGGE----FQPN-SETVASGFFSLDDLPPLYL 181 (206)
T ss_dssp ------CEEEEEEEEEEEEEC----CCCC-SSCSEEEEECTTSCCCBCT
T ss_pred CC-CCceEEEEEEEEEecCCe----ecCC-CCceEEEEEeHHHhhhccC
Confidence 11 123555667777654321 2333 7899999999999976543
No 58
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.44 E-value=4.4e-13 Score=133.36 Aligned_cols=111 Identities=21% Similarity=0.282 Sum_probs=77.0
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
.+++.|+|++ +++|||++|. .+|.|.+| ||++++|||+.+||+||++||||+++... ..++.+.+.....
T Consensus 4 ~~v~~~vi~~--~~~vLL~~r~-----~~g~W~lP-GG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~~~~ 73 (188)
T 3fk9_A 4 QRVTNCIVVD--HDQVLLLQKP-----RRGWWVAP-GGKMEAGESILETVKREYWEETGITVKNP--ELKGIFSMVIFDE 73 (188)
T ss_dssp CEEEEEEEEE--TTEEEEEECT-----TTCCEECC-EEECCTTCCHHHHHHHHHHHHHSCEESSC--EEEEEEEEEEEET
T ss_pred eEEEEEEEEE--CCEEEEEEeC-----CCCeEECC-eecccCCCCHHHHHHHHHHHHHCCCCCCc--eEEEEEEEEecCC
Confidence 4677777776 6899999883 36999999 99999999999999999999999997654 4444444433222
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
.. ...+...++|.+...... ... ..|..+++|+++++++++
T Consensus 74 ~~-~~~~~~~~~f~a~~~~~~----~~~-~~e~~~~~W~~~~el~~~ 114 (188)
T 3fk9_A 74 GK-IVSEWMLFTFKATEHEGE----MLK-QSPEGKLEWKKKDEVLEL 114 (188)
T ss_dssp TE-EEEEEEEEEEEESCEESC----CCS-EETTEEEEEEEGGGGGGS
T ss_pred Cc-ceEEEEEEEEEEECCCCC----CcC-CCCCEeEEEEEHHHhhhC
Confidence 11 112335677777532221 122 234468999999999653
No 59
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.43 E-value=6.4e-13 Score=132.05 Aligned_cols=105 Identities=19% Similarity=0.224 Sum_probs=78.5
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
..+|.++|++ +++|||++|... +.+|.|.+| ||++++|||+.+||+||++||||+++... ..+..+.+ +
T Consensus 40 ~~~v~~ii~~--~~~vLL~~r~~~--~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~~~~~----~ 108 (189)
T 3cng_A 40 KVIVGCIPEW--ENKVLLCKRAIA--PYRGKWTLP-AGFMENNETLVQGAARETLEEANARVEIR--ELYAVYSL----P 108 (189)
T ss_dssp EEEEEEEEEE--TTEEEEEEESSS--SSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCCCEEEE--EEEEEEEE----G
T ss_pred ceEEEEEEEe--CCEEEEEEccCC--CCCCeEECc-eeeccCCCCHHHHHHHHHHHHHCCccccc--eeEEEEec----C
Confidence 4577788877 689999999764 347999999 99999999999999999999999996532 22222222 2
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHH
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 135 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~ 135 (753)
+ .+.+.++|.+...... +. ..+|+.+++|++++++.
T Consensus 109 ~----~~~~~~~f~~~~~~~~----~~-~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 109 H----ISQVYMLFRAKLLDLD----FF-PGIESLEVRLFGEQEIP 144 (189)
T ss_dssp G----GTEEEEEEEEEECCSC----CC-CCTTEEEEEEECTTTCC
T ss_pred C----CcEEEEEEEEEeCCCc----cC-CCccceeEEEECHHHcC
Confidence 1 2456788888764321 12 25689999999999996
No 60
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.43 E-value=2.9e-13 Score=135.88 Aligned_cols=115 Identities=19% Similarity=0.195 Sum_probs=84.5
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCC
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 91 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~ 91 (753)
.+|.+++++ ++ +|||++|... ...+|.|++| ||++++||++.+||+||++||||+++. .+..++.+... ++
T Consensus 50 ~av~vl~~~-~~-~vLLvrq~r~-~~~~~~welP-gG~ve~gEs~~~aA~REl~EEtGl~~~--~~~~l~~~~~~---~~ 120 (198)
T 1vhz_A 50 EAVMIVPIV-DD-HLILIREYAV-GTESYELGFS-KGLIDPGESVYEAANRELKEEVGFGAN--DLTFLKKLSMA---PS 120 (198)
T ss_dssp CEEEEEEEE-TT-EEEEEEEEET-TTTEEEEECE-EEECCTTCCHHHHHHHHHHHHHSEEEE--EEEEEEEEECC---TT
T ss_pred CEEEEEEEE-CC-EEEEEEcccC-CCCCcEEEeC-cccCCCCcCHHHHHHHHHHHHHCCCcC--ceEEEEEEeCC---CC
Confidence 367777777 44 9999877543 3457899998 999999999999999999999999854 46667666431 21
Q ss_pred CcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004451 92 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 92 g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
. .....++|++...... ....+++|..++.|++++++.+++.++
T Consensus 121 ~---~~~~~~~f~a~~~~~~---~~~~~~~E~~~~~w~~~~el~~~~~~~ 164 (198)
T 1vhz_A 121 Y---FSSKMNIVVAQDLYPE---SLEGDEPEPLPQVRWPLAHMMDLLEDP 164 (198)
T ss_dssp T---CCCEEEEEEEEEEEEC---CCCCCCSSCCCEEEEEGGGGGGGGGCT
T ss_pred c---cCcEEEEEEEEeCCcc---cCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 1 2345677888653321 124566788999999999999988754
No 61
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.42 E-value=1.1e-12 Score=142.65 Aligned_cols=118 Identities=21% Similarity=0.266 Sum_probs=84.2
Q ss_pred ceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCc----eEEEEEEEe
Q 004451 10 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDA----FEFVFTFLQ 85 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~----L~~l~~~~~ 85 (753)
.+.+|.++|++ +++|||++|... +.+|.|.+| ||++++|||+++||+||++||||+++.... +.....+.+
T Consensus 207 ~~~~v~~vv~~--~~~vLL~~r~~~--~~~g~w~lP-gG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~~ 281 (352)
T 2qjt_B 207 NFVTVDALVIV--NDHILMVQRKAH--PGKDLWALP-GGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDY 281 (352)
T ss_dssp EEEEEEEEEEE--TTEEEEEEESSS--SSTTCEECS-EEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEECC
T ss_pred CceEEEEEEEE--CCEEEEEEEcCC--CCCCeEECC-CCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEecC
Confidence 46788888886 689999999763 357999999 999999999999999999999999965322 223333332
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCH-HHHHhH
Q 004451 86 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAY-EEYKNL 137 (753)
Q Consensus 86 ~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~-~El~~l 137 (753)
. +.....+.+.++|++........ ....+++|+.+++|+++ ++++++
T Consensus 282 ~----~~~~~~~~~~~~f~~~~~~~~~~-~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 282 P----DRSVRGRTISHVGLFVFDQWPSL-PEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp T----TSCTTSEEEEEEEEEEECSCSSC-CCCCCCTTEEEEEEEESSHHHHHT
T ss_pred C----CCCCCccEEEEEEEEEEeCCCCC-CccCCCccceEEEEecHHHHHHhh
Confidence 2 21112356777888876433200 01124579999999999 999875
No 62
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.42 E-value=3.1e-14 Score=131.14 Aligned_cols=109 Identities=20% Similarity=0.237 Sum_probs=76.8
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
+.++. +|++ .+++|||+||...+ .++|.|++| ||++++||++.+||.||+.||||+.+.. +..++.+.+. ++
T Consensus 5 ~~~~~-ii~~-~~~~vLl~~r~~~~-~~~g~w~~P-gG~~e~gE~~~~aa~RE~~EE~G~~~~~--~~~~~~~~~~--~~ 76 (129)
T 1mut_A 5 QIAVG-IIRN-ENNEIFITRRAADA-HMANKLEFP-GGKIEMGETPEQAVVRELQEEVGITPQH--FSLFEKLEYE--FP 76 (129)
T ss_dssp ECCCE-ECEE-TTTEEEEEECSSCC-SSSCCEECC-CCCSSSCSSTTHHHHHHHHTTTCCSSCE--ECCCCCCBCC--CS
T ss_pred EEEEE-EEEe-cCCEEEEEEeCCCC-CCCCeEECC-ccCcCCCCCHHHHHHHHHHHHhCCcccc--ceEEEEEEEe--cC
Confidence 33444 4456 57899999997653 689999998 9999999999999999999999998643 3333333221 12
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
+ .+...++|.+..... .+.++|+.+++|++++++.++
T Consensus 77 ~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 77 D----RHITLWFWLVERWEG------EPWGKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp S----CEEECCCEEEEECSS------CCCCCSSCCCEEEESSSCCTT
T ss_pred C----ceEEEEEEEEEccCC------ccCCcccceeEEeCHHHcccc
Confidence 1 233456777765332 223467889999999999654
No 63
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.42 E-value=3.3e-13 Score=136.25 Aligned_cols=118 Identities=17% Similarity=0.290 Sum_probs=80.5
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCC-CCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecC
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHIS-AGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 90 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve-~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~ 90 (753)
.+|.+++++ .+++|||++|...+ ..+|.|++| ||+++ +|||+.+||+||+.||||+.+. .+..++.+ +. .+
T Consensus 44 ~av~v~i~~-~~~~vLLvrr~r~~-~~~~~w~lP-gG~ve~~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~-~~--~~ 115 (207)
T 1mk1_A 44 GAVAIVAMD-DNGNIPMVYQYRHT-YGRRLWELP-AGLLDVAGEPPHLTAARELREEVGLQAS--TWQVLVDL-DT--AP 115 (207)
T ss_dssp CEEEEEECC-TTSEEEEEEEEETT-TTEEEEECC-EEECCSTTCCHHHHHHHHHHHHHCEEEE--EEEEEEEE-CS--CT
T ss_pred CEEEEEEEc-CCCEEEEEEeecCC-CCCcEEEeC-CccccCCCCCHHHHHHHHHHHHHCCccc--ccEEEEEE-Ec--CC
Confidence 477788887 68899998876433 467899999 99999 9999999999999999999864 35556655 22 12
Q ss_pred CCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004451 91 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 91 ~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
+. .....++|++........ ....+++|+.++.|++++++.+++..+
T Consensus 116 ~~---~~~~~~~f~~~~~~~~~~-~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 116 GF---SDESVRVYLATGLREVGR-PEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp TT---BCCCEEEEEEEEEEECCC-----------CEEEEEHHHHHHHHHTT
T ss_pred Cc---cccEEEEEEEEccccCCC-CCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 21 233566787765432221 012456789999999999999998754
No 64
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.41 E-value=4.3e-13 Score=126.76 Aligned_cols=113 Identities=20% Similarity=0.440 Sum_probs=76.1
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCC
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 91 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~ 91 (753)
.++.++|++.++++|||++|.. +|.|.+| ||++++|||+.+||+||+.||||+++.. +..+..+.... ..
T Consensus 5 ~~~~~~i~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gEs~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~--~~ 74 (146)
T 2jvb_A 5 PVRGAAIFNENLSKILLVQGTE-----SDSWSFP-RGKISKDENDIDCCIREVKEEIGFDLTD--YIDDNQFIERN--IQ 74 (146)
T ss_dssp CCEEEEEBCTTSSEEEEECCSS-----SSCCBCC-EECCCSSSCHHHHHHHHHHHHTSCCCSS--SSCSSCEEEEE--ET
T ss_pred EEEEEEEEeCCCCEEEEEEEcC-----CCcEECC-cccCCCCCCHHHHHHHHHHHHHCCCchH--hcccccccccc--cC
Confidence 4567788873238999998743 5899999 9999999999999999999999998653 22222222111 11
Q ss_pred CcccceEEEEEEEEEEeCCCCCcCccC-CccceeeEEEeCHHHHHhHHhcC
Q 004451 92 GKFINNEFADVYLVTTLNPIPLEAFTL-QQTEVSAVKYIAYEEYKNLLAKD 141 (753)
Q Consensus 92 g~~~~~~i~~vy~a~~~~~~~~~~~~~-~~~Ev~e~~Wvs~~El~~l~~~~ 141 (753)
+ ...++|++...... ....+ .++|+.+++|++++++.+++...
T Consensus 75 ~-----~~~~~~~~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 118 (146)
T 2jvb_A 75 G-----KNYKIFLISGVSEV--FNFKPQVRNEIDKIEWFDFKKISKTMYKS 118 (146)
T ss_dssp T-----EEEEEEEECCCCSS--SCCCCCCSSSCCCEEEEEHHHHHTGGGCS
T ss_pred C-----ceEEEEEEEecccc--ccCCcCCcchhheeEEeEHHHHHhhhccc
Confidence 1 12345555322211 11222 35789999999999999987643
No 65
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.40 E-value=7.1e-13 Score=143.20 Aligned_cols=117 Identities=14% Similarity=0.152 Sum_probs=80.3
Q ss_pred ceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCc----eEEEEEEEe
Q 004451 10 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDA----FEFVFTFLQ 85 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~----L~~l~~~~~ 85 (753)
.+.+|.++|++ +++|||++|... +.+|.|.+| ||++++|||+.+||+||++||||+++.... +.....+.+
T Consensus 202 ~~~~v~~vi~~--~~~vLL~~r~~~--~~~g~w~lP-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 276 (341)
T 2qjo_A 202 TFITTDAVVVQ--AGHVLMVRRQAK--PGLGLIALP-GGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFDA 276 (341)
T ss_dssp CEEEEEEEEEE--TTEEEEEECCSS--SSTTCEECS-EEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEECC
T ss_pred CceEEEEEEEe--CCEEEEEEecCC--CCCCeEECC-CCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEeC
Confidence 46888888886 689999999653 458999999 999999999999999999999999965322 233444433
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 86 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 86 ~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
..+.+ ..+.+.++|++....... ....+++|+.+++|+++++++++
T Consensus 277 ~~~~~----~~~~~~~~f~~~~~~~~~--~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 277 PGRSL----RGRTITHAYFIQLPGGEL--PAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp TTSCT----TSCEEEEEEEEECCSSSC--CCCC------CEEEEEHHHHHHT
T ss_pred CCCCC----CCcEEEEEEEEEecCCCc--CccCCCCceeeEEEeeHHHHhhh
Confidence 22111 235677888887533211 11235578999999999999875
No 66
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.38 E-value=8.8e-13 Score=126.60 Aligned_cols=103 Identities=17% Similarity=0.344 Sum_probs=70.6
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEe------
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ------ 85 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~------ 85 (753)
.++.++|++ +++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+++....+ ++.+.+
T Consensus 2 ~~~~~vi~~--~~~vLL~~r~~-----~g~W~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~~~~--~~~~~~~~~~~~ 71 (156)
T 1k2e_A 2 IVTSGVLVE--NGKVLLVKHKR-----LGVYIYP-GGHVEHNETPIEAVKREFEEETGIVVEPIGF--TYGIIDENAVER 71 (156)
T ss_dssp EEEEEECEE--TTEEEEEECTT-----TCSEECS-EEECCTTCCHHHHHHHHHHHHHSEEEEECCC--CCCCBSSSEEEC
T ss_pred eEEEEEEEE--CCEEEEEEEcC-----CCcEECC-eeecCCCCCHHHHHHHHHHHHHCCcceeccc--eeeecccccccc
Confidence 567788887 78999999853 5899999 9999999999999999999999998654322 110000
Q ss_pred ---------eeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 86 ---------QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 86 ---------~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
...+++. ....+..+|.+.. .++|+.+++|++++|++++
T Consensus 72 ~~~~~~~~~~~~~~~~--~~~~~~~~f~~~~-----------~~~e~~~~~W~~~~el~~~ 119 (156)
T 1k2e_A 72 PMPLVILEEVVKYPEE--THIHFDLIYLVKR-----------VGGDLKNGEWIDVREIDRI 119 (156)
T ss_dssp CCCSEEEEEEEECSSC--EEEEEEEEEEEEE-----------EEECCCSCEEEEGGGGGGS
T ss_pred cccceeeeeeecCCCC--ceEEEEEEEEEEe-----------cCCcEeeeEEeCHHHHhcC
Confidence 0011211 1122344565542 1246789999999999753
No 67
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.37 E-value=3.5e-12 Score=124.11 Aligned_cols=96 Identities=19% Similarity=0.332 Sum_probs=67.6
Q ss_pred ceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeec
Q 004451 10 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 89 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~ 89 (753)
...++.+++.+ +++|||++|. +|.|.+| ||++++|||+.+||+||+.||||+++. .+..++++.+.
T Consensus 15 ~~~~~~~ii~~--~~~vLL~~r~------~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~~~~--- 80 (163)
T 3f13_A 15 LARRATAIIEM--PDGVLVTASR------GGRYNLP-GGKANRGELRSQALIREIREETGLRIN--SMLYLFDHITP--- 80 (163)
T ss_dssp CEEEEEEECEE--TTEEEEEECC---------BBCS-EEECCTTCCHHHHHHHHHHHHHCCCCC--EEEEEEEEECS---
T ss_pred ceEEEEEEEEe--CCEEEEEEEC------CCeEECC-ceeCCCCCCHHHHHHHHHHHHHCcccc--eeEEEEEEecC---
Confidence 34555555554 6889999884 4899999 999999999999999999999999964 35666655431
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHH
Q 004451 90 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYE 132 (753)
Q Consensus 90 ~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~ 132 (753)
....++|++...+. +.+. +|+.+++|++.+
T Consensus 81 -------~~~~~~f~~~~~~~-----~~~~-~E~~~~~W~~~~ 110 (163)
T 3f13_A 81 -------FNAHKVYLCIAQGQ-----PKPQ-NEIERIALVSSP 110 (163)
T ss_dssp -------SEEEEEEEEEC-CC-----CCCC-TTCCEEEEESST
T ss_pred -------CeEEEEEEEEECCc-----CccC-CCceEEEEECcc
Confidence 14567788764322 2333 488999999933
No 68
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.33 E-value=2.9e-12 Score=122.65 Aligned_cols=109 Identities=14% Similarity=0.193 Sum_probs=74.8
Q ss_pred EEEEEEEecC--CCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHH-HHHHHHHHHHHC-CccCCCceEEEEEEEeeee
Q 004451 13 TVNAWIFAES--TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL-ISAQRELQEELG-INLPKDAFEFVFTFLQQNV 88 (753)
Q Consensus 13 aV~v~V~~~~--~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~-~AA~REl~EEtG-l~v~~~~L~~l~~~~~~~~ 88 (753)
.+.++|.+.. +++|||+||... ..++|+|++| ||+++.||++. +||+||+.|||| +++.. +..++.+.+..
T Consensus 21 ~~~~vi~~~~~~~~~vLl~~R~~~-~~~~g~w~~P-gG~~e~gE~~~~~a~~REl~EE~g~l~~~~--~~~l~~~~~~~- 95 (155)
T 1x51_A 21 SATCVLEQPGALGAQILLVQRPNS-GLLAGLWEFP-SVTWEPSEQLQRKALLQELQRWAGPLPATH--LRHLGEVVHTF- 95 (155)
T ss_dssp EEEEEEEEECSSSEEEEEEECCCC-STTCSCEECC-EEECCSSHHHHHHHHHHHHHHHSCCCCSTT--CEECCCBCCBC-
T ss_pred EEEEEEEecCCCCCEEEEEECCCC-CCCCceecCC-ccccCCCCCHHHHHHHHHHHHHhCCcceee--eeecceEEEec-
Confidence 3444555511 479999999653 5789999999 99999999996 999999999999 77532 34444433221
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 89 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 89 ~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
.+ .+...++|.+..... .+...|..+++|++++++.++
T Consensus 96 -~~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 96 -SH----IKLTYQVYGLALEGQ------TPVTTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp -SS----CEEEEEEEEEECSSC------CCCCCCCTTEEEEEHHHHHHS
T ss_pred -CC----ccEEEEEEEEEEcCC------CCCCCCCCccEEccHHHhhhc
Confidence 21 233456777764322 122346778999999999764
No 69
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.32 E-value=1.4e-12 Score=137.30 Aligned_cols=113 Identities=18% Similarity=0.260 Sum_probs=74.3
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCC
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 91 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~ 91 (753)
.+++++|++.++++|||++|.. .+|.|.+| ||++++|||+.+||+||++||||+++.. +..+..+....
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEs~~eAA~REl~EEtGl~~~~--l~~~~~~~~~~---- 170 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWK----ASSGWGFP-KGKIDKDESDVDCAIREVYEETGFDCSS--RINPNEFIDMT---- 170 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESS----TTCCCBCS-EEECCTTCCHHHHHHHHHHHHHCCCCTT--TCCTTCEEEEE----
T ss_pred CeEEEEEEECCCCEEEEEEEeC----CCCeEECC-cccCCCCcCHHHHHHHHHHHHhCCCcee--eeeeeeeccCC----
Confidence 4677888873358999999954 35899999 9999999999999999999999999654 22222221110
Q ss_pred CcccceEEEEEEEEEEeCCCCCcCcc-CCccceeeEEEeCHHHHHhHHhc
Q 004451 92 GKFINNEFADVYLVTTLNPIPLEAFT-LQQTEVSAVKYIAYEEYKNLLAK 140 (753)
Q Consensus 92 g~~~~~~i~~vy~a~~~~~~~~~~~~-~~~~Ev~e~~Wvs~~El~~l~~~ 140 (753)
......++|++...... .... .+++|+.+++|+++++++++...
T Consensus 171 ---~~~~~~~~f~~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 171 ---IRGQNVRLYIIPGISLD--TRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp ---ETTEEEEEEEECCCCTT--CCCC------EEEEEEEEGGGSTTCC--
T ss_pred ---cCCceEEEEEEEEecCc--ccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 01234566777532211 1112 24579999999999999876543
No 70
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.27 E-value=9.4e-12 Score=125.99 Aligned_cols=106 Identities=19% Similarity=0.104 Sum_probs=72.2
Q ss_pred CEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCCCcccceEEEEEE
Q 004451 24 QELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVY 103 (753)
Q Consensus 24 g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~g~~~~~~i~~vy 103 (753)
++|||+++.+.+ ..++.|++| ||++++||++.+||+||++||||+.+.. +..++.+. .. + + ......++|
T Consensus 77 ~~vlLv~q~R~~-~~~~~welP-gG~ve~gEs~~~aA~REl~EEtGl~~~~--~~~l~~~~-~~--~-~--~~~~~~~~~ 146 (212)
T 2dsc_A 77 ECIVLVKQFRPP-MGGYCIEFP-AGLIDDGETPEAAALRELEEETGYKGDI--AECSPAVC-MD--P-G--LSNCTIHIV 146 (212)
T ss_dssp CEEEEEEEEEGG-GTEEEEECC-EEECCTTCCHHHHHHHHHHHHHCCCCEE--EEECCCEE-SC--T-T--TBCCEEEEE
T ss_pred cEEEEEEeecCC-CCCcEEECC-ccccCCCCCHHHHHHHHHHHHhCCCccc--eEEeccEE-cC--C-C--ccCceEEEE
Confidence 478887653221 245789999 9999999999999999999999998542 33333331 11 2 1 123456778
Q ss_pred EEEEeCCCCC---cCccCCccceeeEEEeCHHHHHhHHh
Q 004451 104 LVTTLNPIPL---EAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 104 ~a~~~~~~~~---~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
++.+...... ....++++|+.++.|++++++.+++.
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 147 TVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp EEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred EEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 7765422110 12345677999999999999998876
No 71
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.20 E-value=6.6e-11 Score=129.56 Aligned_cols=109 Identities=13% Similarity=0.200 Sum_probs=70.6
Q ss_pred CCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCCCcc-------c
Q 004451 23 TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF-------I 95 (753)
Q Consensus 23 ~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~g~~-------~ 95 (753)
+.+|||++|.. .|.|.+| ||++++|||+.+||+||++||||+++.. ...++.+.+....++... .
T Consensus 37 ~~~vLLv~r~~-----~g~W~lP-gG~ve~gEs~~~AA~REl~EEtGl~~~~--~~~l~~~~~~~~~~g~~~~~~~~~~~ 108 (364)
T 3fjy_A 37 SIEVCIVHRPK-----YDDWSWP-KGKLEQNETHRHAAVREIGEETGSPVKL--GPYLCEVEYPLSEEGKKTRHSHDCTA 108 (364)
T ss_dssp TEEEEEEEETT-----TTEEECC-EEECCTTCCHHHHHHHHHHHHHSCCEEE--EEEEEEEC------------------
T ss_pred ceEEEEEEcCC-----CCCEECC-cCCCCCCCCHHHHHHHHHHHHhCCeeee--ccccceEEEeccCCCccccccccccc
Confidence 34899999833 3899999 9999999999999999999999999654 344554444322111000 0
Q ss_pred ceEEEEEEEEEEeCCCC--------CcCccCCccceeeEEEeCHHHHHhHHh
Q 004451 96 NNEFADVYLVTTLNPIP--------LEAFTLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 96 ~~~i~~vy~a~~~~~~~--------~~~~~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
.+...++|.+....... ......+++|+.+++|++++++.+++.
T Consensus 109 ~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 109 DTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp ---CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCS
T ss_pred CceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhc
Confidence 13455667776543210 001134567999999999999988754
No 72
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.17 E-value=1.3e-11 Score=125.17 Aligned_cols=101 Identities=18% Similarity=0.190 Sum_probs=71.4
Q ss_pred CCCEEEEEEeCCCCCCCCCCeeecccccCCCCC-CHHHHHHHHHHHHHCCccCCCce---EEEEEEEeeeecCCCcccce
Q 004451 22 STQELLLQRRADFKDSWPGMWDISSAGHISAGD-SSLISAQRELQEELGINLPKDAF---EFVFTFLQQNVINDGKFINN 97 (753)
Q Consensus 22 ~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gE-s~~~AA~REl~EEtGl~v~~~~L---~~l~~~~~~~~~~~g~~~~~ 97 (753)
++++|||++| ++|.|++| ||++++|| |+.+||+||+.||||+.+....+ ..++++.+. ++ .+
T Consensus 54 ~~~~vLl~~r------~~g~w~~P-GG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~--~~-----~~ 119 (212)
T 1u20_A 54 IRRVLLMMMR------FDGRLGFP-GGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVRE--HP-----QK 119 (212)
T ss_dssp CCEEEEEEEE------TTSCEECS-EEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEEC--TT-----SC
T ss_pred cCCEEEEEEe------CCCeEECC-CcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEecccc--CC-----Cc
Confidence 3568999988 36999999 99999999 99999999999999999764332 245554432 12 24
Q ss_pred EEEEEEEEEEeCCCCC------cCccCCccceeeEEEeCHHHHHh
Q 004451 98 EFADVYLVTTLNPIPL------EAFTLQQTEVSAVKYIAYEEYKN 136 (753)
Q Consensus 98 ~i~~vy~a~~~~~~~~------~~~~~~~~Ev~e~~Wvs~~El~~ 136 (753)
...++|.+........ .....++.|+.++.|++++++.+
T Consensus 120 ~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~ 164 (212)
T 1u20_A 120 CVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRD 164 (212)
T ss_dssp EEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTT
T ss_pred EEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhh
Confidence 5677888865321100 00122446889999999999854
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.16 E-value=6.5e-11 Score=125.92 Aligned_cols=109 Identities=16% Similarity=0.163 Sum_probs=68.9
Q ss_pred EEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCC---------ceEE------EEEEEeeeec
Q 004451 25 ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKD---------AFEF------VFTFLQQNVI 89 (753)
Q Consensus 25 ~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~---------~L~~------l~~~~~~~~~ 89 (753)
+|||++|.. .|.|.+| ||+|++||++.+||+||+.||||+.+... .+.+ ...+....++
T Consensus 140 ~vLl~~r~~-----~g~W~lP-GG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~d 213 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIP-GGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDD 213 (292)
T ss_dssp EEEEEECTT-----TCSEECC-CEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCC
T ss_pred EEEEEEecC-----CCcEeCC-CcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccC
Confidence 699999854 3899999 99999999999999999999999983110 1221 1122222222
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCcCc-cCCccceeeEEEeCHHHHHhHHh
Q 004451 90 NDGKFINNEFADVYLVTTLNPIPLEAF-TLQQTEVSAVKYIAYEEYKNLLA 139 (753)
Q Consensus 90 ~~g~~~~~~i~~vy~a~~~~~~~~~~~-~~~~~Ev~e~~Wvs~~El~~l~~ 139 (753)
+...-..+.+..+|.+........... ....+|+.+++|+++++++++..
T Consensus 214 pr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L~~ 264 (292)
T 1q33_A 214 PRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKLYA 264 (292)
T ss_dssp TTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCCST
T ss_pred CCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCcccCH
Confidence 221001245666777654322111111 23457899999999999976544
No 74
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.14 E-value=2.5e-10 Score=117.31 Aligned_cols=123 Identities=17% Similarity=0.221 Sum_probs=83.3
Q ss_pred EEEEEEEEecC-CC--EEEEEEeCCCCCCCCCCeeecccccCCCCCC--------------------HHHHHHHHHHHHH
Q 004451 12 RTVNAWIFAES-TQ--ELLLQRRADFKDSWPGMWDISSAGHISAGDS--------------------SLISAQRELQEEL 68 (753)
Q Consensus 12 ~aV~v~V~~~~-~g--~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs--------------------~~~AA~REl~EEt 68 (753)
.++.++++... ++ +|||+||+.....++|.|.+| ||+|+++|+ +..||+||++|||
T Consensus 9 ~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fP-GG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~ 87 (232)
T 3qsj_A 9 KAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFP-GGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEI 87 (232)
T ss_dssp EEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECS-EEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECC-ceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHh
Confidence 34444444422 33 899999988776679999999 999999997 5899999999999
Q ss_pred CCccCC----------------------------------------CceEEEEEEEeeeecCCCcccceEEEEEEEEEEe
Q 004451 69 GINLPK----------------------------------------DAFEFVFTFLQQNVINDGKFINNEFADVYLVTTL 108 (753)
Q Consensus 69 Gl~v~~----------------------------------------~~L~~l~~~~~~~~~~~g~~~~~~i~~vy~a~~~ 108 (753)
|+.+.. ..|.....+.. |.+ ...+.-+++|++..+
T Consensus 88 Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiT----P~~-~~rRfdT~FFla~lp 162 (232)
T 3qsj_A 88 GWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVT----PPT-QPVRFDTRFFLCVGQ 162 (232)
T ss_dssp SCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEEC----CTT-SSSEEEEEEEEEECS
T ss_pred CceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcC----CcC-CceeEEEEEEEEECC
Confidence 997521 01222222222 222 123455666766554
Q ss_pred CCCCCcCccCCccceeeEEEeCHHHHHhHHhcCCC
Q 004451 109 NPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDP 143 (753)
Q Consensus 109 ~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~~~ 143 (753)
. . ..+..+.+|+.++.|+++.|+.+....+..
T Consensus 163 q-~--~~v~~d~~E~~~~~W~~p~eal~~~~~G~i 194 (232)
T 3qsj_A 163 H-L--GEPRLHGAELDAALWTPARDMLTRIQSGEL 194 (232)
T ss_dssp S-C--CCCCCCSSSEEEEEEEEHHHHHHHHHTTSS
T ss_pred C-C--CCCCCCCCceEEEEEEcHHHHHHHHHcCCc
Confidence 1 1 112456789999999999999988876543
No 75
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.09 E-value=1.3e-10 Score=127.61 Aligned_cols=105 Identities=10% Similarity=0.134 Sum_probs=76.3
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCC
Q 004451 12 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 91 (753)
Q Consensus 12 ~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~ 91 (753)
.++.++|++ ++|+|||+||.. +..++|+|++| ||+++.| |+.+|+.||+.||||+++.... .++.+.+.. ++
T Consensus 241 ~~~~~vi~~-~~g~vLL~rR~~-~g~~~GlWefP-GG~ve~g-t~~~al~REl~EE~Gl~v~~~~--~l~~~~h~~--~h 312 (369)
T 3fsp_A 241 PLAVAVLAD-DEGRVLIRKRDS-TGLLANLWEFP-SCETDGA-DGKEKLEQMVGEQYGLQVELTE--PIVSFEHAF--SH 312 (369)
T ss_dssp EEEEEEEEC-SSSEEEEEECCS-SSTTTTCEECC-EEECSSS-CTHHHHHHHHTTSSSCCEEECC--CCCEEEEEC--SS
T ss_pred EEEEEEEEe-CCCEEEEEECCC-CCCcCCcccCC-CcccCCC-CcHHHHHHHHHHHhCCceeeec--ccccEEEEc--ce
Confidence 445566666 678999999965 45789999999 9999999 9999999999999999965433 233333322 21
Q ss_pred CcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 92 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 92 g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
.+...++|.+..... ..|..+++|++++++.++
T Consensus 313 ----~~~~~~~~~~~~~~~---------~~e~~~~~Wv~~~el~~~ 345 (369)
T 3fsp_A 313 ----LVWQLTVFPGRLVHG---------GPVEEPYRLAPEDELKAY 345 (369)
T ss_dssp ----EEEEEEEEEEEECCS---------SCCCTTEEEEEGGGGGGS
T ss_pred ----EEEEEEEEEEEEcCC---------CCCccccEEeeHHHhhhC
Confidence 234556777754321 357788999999999653
No 76
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.87 E-value=9.8e-10 Score=111.85 Aligned_cols=100 Identities=19% Similarity=0.088 Sum_probs=64.9
Q ss_pred CEEEEEEeCCCCCCCCCCeeecccccCCCCC-CHHHHHHHHHHHHHCCccCCCceEEEEEEEeeeecCCCcccceEEEEE
Q 004451 24 QELLLQRRADFKDSWPGMWDISSAGHISAGD-SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 102 (753)
Q Consensus 24 g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gE-s~~~AA~REl~EEtGl~v~~~~L~~l~~~~~~~~~~~g~~~~~~i~~v 102 (753)
+++||+.|. +|.|++| ||++++|| |+.+||+||++||||+.+....+..+..+... ++. ..+.+.++
T Consensus 65 ~~~ll~~r~------~g~w~lP-GG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~---~~~--~~~~~~~~ 132 (217)
T 2xsq_A 65 YAILMQMRF------DGRLGFP-GGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSH---VGS--GPRVVAHF 132 (217)
T ss_dssp EEEEEEEET------TSCEECS-EEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEE---ECS--SSSEEEEE
T ss_pred CcEEEEEcc------CCeEECC-ceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeec---CCC--CCeEEEEE
Confidence 357777773 5899999 99999999 99999999999999999764333222222111 111 12556677
Q ss_pred EEEEEeCCCC--C----cCccCCccceeeEEEeCHHHHH
Q 004451 103 YLVTTLNPIP--L----EAFTLQQTEVSAVKYIAYEEYK 135 (753)
Q Consensus 103 y~a~~~~~~~--~----~~~~~~~~Ev~e~~Wvs~~El~ 135 (753)
|.+.+..... . ........|+.++.|++++++.
T Consensus 133 f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 133 YAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp EEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred EEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 7776432100 0 0012234688999999999874
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.49 E-value=1.2e-07 Score=101.93 Aligned_cols=93 Identities=13% Similarity=0.155 Sum_probs=62.1
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHH-CCccCCCceEEEEEEEeeeec
Q 004451 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEEL-GINLPKDAFEFVFTFLQQNVI 89 (753)
Q Consensus 11 h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEt-Gl~v~~~~L~~l~~~~~~~~~ 89 (753)
..+|+++|.+ +|+|||+ . ..| |.+| ||.++.+++ ++|+||+.||| |+++....|..+ |..
T Consensus 183 ~~~vgaii~~--~g~vLL~---~----~~G-W~LP-G~~~~~~~~--~~a~RE~~EEttGl~v~~~~L~~v--~~~---- 243 (321)
T 3rh7_A 183 EIRLGAVLEQ--QGAVFLA---G----NET-LSLP-NCTVEGGDP--ARTLAAYLEQLTGLNVTIGFLYSV--YED---- 243 (321)
T ss_dssp CEEEEEEEES--SSCEEEB---C----SSE-EBCC-EEEESSSCH--HHHHHHHHHHHHSSCEEEEEEEEE--EEC----
T ss_pred cceEEEEEEE--CCEEEEe---e----CCC-ccCC-cccCCCChh--HHHHHHHHHHhcCCEEeeceEEEE--EEc----
Confidence 4678888876 6899999 1 248 9999 987654444 59999999997 999764333222 221
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004451 90 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 137 (753)
Q Consensus 90 ~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l 137 (753)
+. .+....+|.++..+. +..+++||+++||+.+
T Consensus 244 ~~----~~~~~i~f~~~~~~g-----------~~~e~~~f~~~elp~~ 276 (321)
T 3rh7_A 244 KS----DGRQNIVYHALASDG-----------APRQGRFLRPAELAAA 276 (321)
T ss_dssp TT----TCCEEEEEEEEECSS-----------CCSSSEEECHHHHTTC
T ss_pred CC----CceEEEEEEEEeCCC-----------CeeeeEEECHHHCCCc
Confidence 11 122345777765322 2367999999999643
No 78
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.44 E-value=1.4e-07 Score=92.51 Aligned_cols=83 Identities=19% Similarity=0.319 Sum_probs=56.6
Q ss_pred ceEEEEEEEEecCCC----------EEEEEEeCCCCCCCCCCeeecccccCCCCC-CHHHHHHHHHHHHHCC-ccCCCce
Q 004451 10 YHRTVNAWIFAESTQ----------ELLLQRRADFKDSWPGMWDISSAGHISAGD-SSLISAQRELQEELGI-NLPKDAF 77 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g----------~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gE-s~~~AA~REl~EEtGl-~v~~~~L 77 (753)
+..+..|++..++.+ .||||.| +.|.|++| ||+|++|| |+++|+.||+.||+|+ .+.. .
T Consensus 20 ~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R------~~G~weFP-GGkVe~gE~t~e~aL~REl~EElg~~~V~~--~ 90 (214)
T 3kvh_A 20 WSHSCHAMLYAANPGQLFGRIPMRFSVLMQMR------FDGLLGFP-GGFVDRRFWSLEDGLNRVLGLGLGCLRLTE--A 90 (214)
T ss_dssp CEEEEEEEEEEEEEEEETTTEEEEEEEEEEEE------TTSCEECS-EEEECTTTCCHHHHHHHSCCSCC---CCCG--G
T ss_pred ccEeeEEEEEcCCccccccccchhheEEEeee------eCCEEeCC-CccCCCCCCCHHHHHHHHHHHhhCCeeeee--e
Confidence 456777777765433 3788888 34999999 99999999 9999999999999997 4433 2
Q ss_pred EEEEEEEeeeecCCCcccceEEEEEEEEEEe
Q 004451 78 EFVFTFLQQNVINDGKFINNEFADVYLVTTL 108 (753)
Q Consensus 78 ~~l~~~~~~~~~~~g~~~~~~i~~vy~a~~~ 108 (753)
..+.+..+.. + .+...++|.++..
T Consensus 91 ~y~~s~~~~y--p-----~~V~LHfY~crl~ 114 (214)
T 3kvh_A 91 DYLSSHLTEG--P-----HRVVAHLYARQLT 114 (214)
T ss_dssp GEEEEEEC-----------CEEEEEEEEECC
T ss_pred eeEEEEeccC--C-----CEEEEEEEEEEee
Confidence 3344443221 1 1456788888754
No 79
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.14 E-value=4.9e-06 Score=82.68 Aligned_cols=56 Identities=18% Similarity=0.354 Sum_probs=44.9
Q ss_pred cCCceEEEEEEEEecCCC--EEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCC
Q 004451 7 VGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 70 (753)
Q Consensus 7 ~g~~h~aV~v~V~~~~~g--~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl 70 (753)
.|++..+.++++++ +.+ +|||.|+.. +.|.+| ||.+++||+.++|+.|||.||+|+
T Consensus 55 ~g~R~sV~avil~~-~~~~phVLLlq~~~------~~f~LP-GGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 55 IGMRRTVEGVLIVH-EHRLPHVLLLQLGT------TFFKLP-GGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp HCSEEEEEEEEEEE-ETTEEEEEEEEEET------TEEECS-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred hCCceEEEEEEEEc-CCCCcEEEEEEcCC------CcEECC-CcccCCCCCHHHHHHHHHHHHhCC
Confidence 45555556666665 444 799888733 589999 999999999999999999999996
No 80
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=68.34 E-value=0.96 Score=43.00 Aligned_cols=17 Identities=18% Similarity=0.278 Sum_probs=14.2
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
..+|++||+||.+|-.+
T Consensus 111 ~~~va~HEiGHaLGL~H 127 (159)
T 2ovx_A 111 LFLVAAHQFGHALGLDH 127 (159)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hhhhhhhhhhhhhcCCC
Confidence 45899999999999643
No 81
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=65.77 E-value=1.2 Score=42.80 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=14.4
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
..+|++||+||.+|-.+
T Consensus 111 ~~~v~~HEiGHaLGL~H 127 (168)
T 1cge_A 111 LHRVAAHELGHSLGLSH 127 (168)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hhhhhhhHhHhhhcCCC
Confidence 46999999999999644
No 82
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=65.76 E-value=1 Score=43.03 Aligned_cols=18 Identities=22% Similarity=0.172 Sum_probs=14.5
Q ss_pred cchhhhhhhcccCcCCCC
Q 004451 567 FFTHNICHECCHGIGPHS 584 (753)
Q Consensus 567 ~~~~v~lHElgHgsGk~~ 584 (753)
...+|++||+||.+|-.+
T Consensus 114 ~~~~v~~HEiGHaLGL~H 131 (167)
T 2xs4_A 114 DLITVAAHEIGHLLGIEH 131 (167)
T ss_dssp EHHHHHHHHHHHHHTBCC
T ss_pred chhhhHHHHHHHhhcCCC
Confidence 345999999999999643
No 83
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=65.00 E-value=1.1 Score=42.44 Aligned_cols=17 Identities=24% Similarity=0.323 Sum_probs=14.5
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
...|++||+||.+|-.+
T Consensus 108 ~~~v~~HEiGHaLGL~H 124 (160)
T 2jsd_A 108 LFTVAAHEFGHALGLAH 124 (160)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHhHhhhcCCC
Confidence 46999999999999744
No 84
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=63.66 E-value=1.2 Score=42.89 Aligned_cols=17 Identities=24% Similarity=0.298 Sum_probs=14.3
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
..+|++||+||.+|-.+
T Consensus 113 ~~~v~~HEiGHaLGL~H 129 (173)
T 1hy7_A 113 LFLVAAHEIGHSLGLFH 129 (173)
T ss_dssp HHHHHHHHHHHHHTBCC
T ss_pred hhhhHHHHHHHhhcCCC
Confidence 46999999999999643
No 85
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=61.33 E-value=1.6 Score=41.70 Aligned_cols=18 Identities=22% Similarity=0.233 Sum_probs=14.7
Q ss_pred cchhhhhhhcccCcCCCC
Q 004451 567 FFTHNICHECCHGIGPHS 584 (753)
Q Consensus 567 ~~~~v~lHElgHgsGk~~ 584 (753)
...+|++||+||.+|-.+
T Consensus 112 ~~~~v~~HEiGHaLGL~H 129 (165)
T 1hv5_A 112 DLLQVAAHEFGHVLGLQH 129 (165)
T ss_dssp EHHHHHHHHHHHHTTCCC
T ss_pred hhhhhHHHHhHhhhCCCC
Confidence 346999999999999643
No 86
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=55.35 E-value=2.3 Score=43.70 Aligned_cols=17 Identities=24% Similarity=0.298 Sum_probs=14.4
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
..+|++||+||.+|-.+
T Consensus 195 l~~va~HEiGHaLGL~H 211 (255)
T 1slm_A 195 LFLVAAHEIGHSLGLFH 211 (255)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred ehhhhHHHHHHHhcCCC
Confidence 45999999999999644
No 87
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=52.01 E-value=2.5 Score=40.28 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=14.1
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
..+|++||+||.+|-.+
T Consensus 112 ~~~v~~HE~GHalGl~H 128 (163)
T 1i76_A 112 LFLVAAHEFGHSLGLAH 128 (163)
T ss_dssp HHHHHHHHHHHHHTBCC
T ss_pred hhhhhHHHhhhhhcCCC
Confidence 46999999999999633
No 88
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=50.97 E-value=2.9 Score=39.94 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=13.6
Q ss_pred chhhhhhhcccCcCCC
Q 004451 568 FTHNICHECCHGIGPH 583 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~ 583 (753)
..+|++||+||.+|-.
T Consensus 114 ~~~~~~HE~gH~lGl~ 129 (167)
T 3ayu_A 114 LFLVAAHAFGHAMGLE 129 (167)
T ss_dssp HHHHHHHHHHHHTTEE
T ss_pred ceeehhhhhHHhccCC
Confidence 3589999999999963
No 89
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=48.80 E-value=3.3 Score=39.19 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.2
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
...|++||+||.+|-.+
T Consensus 108 ~~~~~~HE~GH~lGl~H 124 (159)
T 1y93_A 108 LFLTAVHEIGHSLGLGH 124 (159)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hhhhhhhhhhhhhcCCC
Confidence 45999999999999643
No 90
>3p1v_A Metallo-endopeptidase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.93A {Bacteroides ovatus atcc 8483} PDB: 4df9_A*
Probab=44.50 E-value=5 Score=43.74 Aligned_cols=16 Identities=31% Similarity=0.578 Sum_probs=14.0
Q ss_pred cchhhhhhhcccCcCC
Q 004451 567 FFTHNICHECCHGIGP 582 (753)
Q Consensus 567 ~~~~v~lHElgHgsGk 582 (753)
.+.+|+.||+||+.|+
T Consensus 286 ~~~~V~vHE~GHsfgg 301 (407)
T 3p1v_A 286 MFKPVVVHEFGHSFGG 301 (407)
T ss_dssp THHHHHHHHHHHHTTC
T ss_pred cccceeeeeccccccc
Confidence 3568999999999999
No 91
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=42.99 E-value=4.1 Score=39.17 Aligned_cols=16 Identities=31% Similarity=0.418 Sum_probs=13.7
Q ss_pred chhhhhhhcccCcCCC
Q 004451 568 FTHNICHECCHGIGPH 583 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~ 583 (753)
..+|++||+||.+|-.
T Consensus 115 ~~~~~~HE~gH~lGl~ 130 (174)
T 2y6d_A 115 FLYAATHELGHSLGMG 130 (174)
T ss_dssp HHHHHHHHHHHHHTBC
T ss_pred eeehhhHHhHhhhcCC
Confidence 4589999999999963
No 92
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=42.71 E-value=4.7 Score=38.62 Aligned_cols=16 Identities=25% Similarity=0.337 Sum_probs=13.7
Q ss_pred chhhhhhhcccCcCCC
Q 004451 568 FTHNICHECCHGIGPH 583 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~ 583 (753)
..+|++||+||.+|-.
T Consensus 113 l~~v~~hE~Gh~lGl~ 128 (168)
T 830c_A 113 LFLVAAHEFGHSLGLD 128 (168)
T ss_dssp HHHHHHHHHHHHTTBC
T ss_pred hhhhhhhhhcchhcCC
Confidence 4589999999999963
No 93
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=40.86 E-value=4.7 Score=38.45 Aligned_cols=17 Identities=24% Similarity=0.292 Sum_probs=14.2
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
...|++||+||.+|-.+
T Consensus 117 ~~~~~~he~gh~lgl~h 133 (169)
T 1rm8_A 117 LFLVAVHELGHALGLEH 133 (169)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred eeeehhhhhhhhcCCCC
Confidence 45899999999999643
No 94
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=39.96 E-value=5 Score=44.85 Aligned_cols=16 Identities=25% Similarity=0.453 Sum_probs=13.9
Q ss_pred hhhhhhhcccCcCCCC
Q 004451 569 THNICHECCHGIGPHS 584 (753)
Q Consensus 569 ~~v~lHElgHgsGk~~ 584 (753)
.+|++||+||.+|-.|
T Consensus 171 ~~va~HEiGHaLGL~H 186 (471)
T 1sat_A 171 RQTFTHEIGHALGLSH 186 (471)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred ceeeeeeccccccCCC
Confidence 4899999999999654
No 95
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=39.40 E-value=5.2 Score=44.84 Aligned_cols=16 Identities=25% Similarity=0.457 Sum_probs=14.0
Q ss_pred hhhhhhhcccCcCCCC
Q 004451 569 THNICHECCHGIGPHS 584 (753)
Q Consensus 569 ~~v~lHElgHgsGk~~ 584 (753)
.+|++||+||.+|-.|
T Consensus 180 ~~va~HEIGHaLGL~H 195 (479)
T 1kap_P 180 RQTLTHEIGHTLGLSH 195 (479)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred ceeehhhhhhhhccCC
Confidence 4999999999999755
No 96
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=39.31 E-value=43 Score=27.21 Aligned_cols=48 Identities=19% Similarity=0.019 Sum_probs=35.7
Q ss_pred CCcEEEEeeccccHHHHHHHHHHHHHHhhc-----------cCChHHHHHHHHHHHHcc
Q 004451 364 IYDLYSVPYSEEYNSYLTRASELLHKAGDM-----------ASSPSLKRLLHSKADAFL 411 (753)
Q Consensus 364 ~g~~~~~~y~g~y~~~l~~v~~~L~~A~~~-----------a~n~~q~~~L~~~~~~f~ 411 (753)
+|..+.+-.+..-..+|+++...|++|... |+|+.|.+-|..+|.-+.
T Consensus 15 dgqeieidirvstgkeleralqelekalaragarnvqitisaendeqakelleliarll 73 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGARNVQITISAENDEQAKELLELIARLL 73 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTCSEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccccceEEEEEecChHHHHHHHHHHHHHH
Confidence 356666666666678999999999998763 679999887776665443
No 97
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=38.94 E-value=5.9 Score=38.82 Aligned_cols=16 Identities=31% Similarity=0.574 Sum_probs=13.6
Q ss_pred chhhhhhhcccCcCCC
Q 004451 568 FTHNICHECCHGIGPH 583 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~ 583 (753)
...|+.|||||..|-.
T Consensus 136 ~a~~~AHElGH~lG~~ 151 (202)
T 2w15_A 136 VAVTMAHELGHNLGIH 151 (202)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhhhcCCc
Confidence 4589999999999963
No 98
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=38.10 E-value=5.6 Score=44.37 Aligned_cols=16 Identities=25% Similarity=0.457 Sum_probs=14.1
Q ss_pred hhhhhhhcccCcCCCC
Q 004451 569 THNICHECCHGIGPHS 584 (753)
Q Consensus 569 ~~v~lHElgHgsGk~~ 584 (753)
.+|++||+||.+|-.|
T Consensus 164 ~~va~HEiGHaLGL~H 179 (463)
T 1g9k_A 164 RQTLTHEIGHTLGLSH 179 (463)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred hhhhhhhhhhhhccCC
Confidence 5999999999999754
No 99
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=37.32 E-value=6.4 Score=38.62 Aligned_cols=15 Identities=27% Similarity=0.461 Sum_probs=13.2
Q ss_pred chhhhhhhcccCcCC
Q 004451 568 FTHNICHECCHGIGP 582 (753)
Q Consensus 568 ~~~v~lHElgHgsGk 582 (753)
...|+.|||||..|-
T Consensus 138 ~a~~~AHElGH~lG~ 152 (203)
T 1kuf_A 138 VAVTMTHELGHNLGM 152 (203)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hHHHHHHHhhhhcCC
Confidence 458899999999996
No 100
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=37.09 E-value=6.5 Score=38.13 Aligned_cols=17 Identities=24% Similarity=0.272 Sum_probs=14.0
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
...|++||+||.+|-.+
T Consensus 122 l~~v~~hE~Gh~lGl~h 138 (181)
T 3ma2_D 122 IFLVAVHELGHALGLEH 138 (181)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred eeeeehhhccccccCCc
Confidence 34899999999999643
No 101
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=36.95 E-value=6 Score=44.33 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=13.9
Q ss_pred hhhhhhhcccCcCCCC
Q 004451 569 THNICHECCHGIGPHS 584 (753)
Q Consensus 569 ~~v~lHElgHgsGk~~ 584 (753)
.+|++||+||.+|-.|
T Consensus 183 ~~va~HEiGHaLGL~H 198 (479)
T 1k7i_A 183 RQTFTHEIGHALGLAH 198 (479)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred ccccHHHHHHhhcCCC
Confidence 5899999999999754
No 102
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=36.30 E-value=6.9 Score=39.80 Aligned_cols=15 Identities=27% Similarity=0.288 Sum_probs=13.1
Q ss_pred chhhhhhhcccCcCC
Q 004451 568 FTHNICHECCHGIGP 582 (753)
Q Consensus 568 ~~~v~lHElgHgsGk 582 (753)
...|+.|||||..|-
T Consensus 182 ~a~~~AHElGHnlG~ 196 (257)
T 2ddf_A 182 ADLVTTHELGHNFGA 196 (257)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred eeeeeeeehhhhcCc
Confidence 457899999999997
No 103
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=35.85 E-value=6.9 Score=38.31 Aligned_cols=15 Identities=27% Similarity=0.452 Sum_probs=12.8
Q ss_pred hhhhhhhcccCcCCC
Q 004451 569 THNICHECCHGIGPH 583 (753)
Q Consensus 569 ~~v~lHElgHgsGk~ 583 (753)
..|+.|||||..|-.
T Consensus 137 a~~~AHElGHnlG~~ 151 (202)
T 1atl_A 137 GVTMAHELGHNLGME 151 (202)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred EEEehhhhccccCce
Confidence 468999999999973
No 104
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=35.38 E-value=7.1 Score=38.03 Aligned_cols=15 Identities=27% Similarity=0.516 Sum_probs=13.0
Q ss_pred chhhhhhhcccCcCC
Q 004451 568 FTHNICHECCHGIGP 582 (753)
Q Consensus 568 ~~~v~lHElgHgsGk 582 (753)
...|+.|||||..|-
T Consensus 135 ~a~~~AHElGH~lG~ 149 (197)
T 1qua_A 135 MAVTMAHELGHNLGM 149 (197)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 357899999999996
No 105
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=35.19 E-value=7.2 Score=38.00 Aligned_cols=16 Identities=25% Similarity=0.528 Sum_probs=13.3
Q ss_pred chhhhhhhcccCcCCC
Q 004451 568 FTHNICHECCHGIGPH 583 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~ 583 (753)
...|+.|||||..|-.
T Consensus 133 ~a~~~AHElGH~lG~~ 148 (197)
T 1bud_A 133 VAITLAHEMAHNLGVS 148 (197)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhhhcCCc
Confidence 3578999999999963
No 106
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=34.98 E-value=7.6 Score=38.43 Aligned_cols=14 Identities=29% Similarity=0.472 Sum_probs=12.7
Q ss_pred hhhhhhhcccCcCC
Q 004451 569 THNICHECCHGIGP 582 (753)
Q Consensus 569 ~~v~lHElgHgsGk 582 (753)
..|+.|||||..|-
T Consensus 142 a~~~AHElGHnlG~ 155 (217)
T 3b8z_A 142 AFTVAHEIGHLLGL 155 (217)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred hhhhHhhhhhhcCC
Confidence 47999999999996
No 107
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=34.80 E-value=7.4 Score=38.12 Aligned_cols=14 Identities=29% Similarity=0.451 Sum_probs=12.6
Q ss_pred hhhhhhhcccCcCC
Q 004451 569 THNICHECCHGIGP 582 (753)
Q Consensus 569 ~~v~lHElgHgsGk 582 (753)
..|+.|||||..|-
T Consensus 136 a~~~AHElGH~lG~ 149 (202)
T 1yp1_A 136 AVVMAHELGHNLGM 149 (202)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCC
Confidence 47899999999996
No 108
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=33.33 E-value=8.3 Score=42.45 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.0
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
..+|+.||+||.+|-.+
T Consensus 376 l~~Va~HE~GHaLGL~H 392 (425)
T 1l6j_A 376 LFLVAAHEFGHALGLDH 392 (425)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred chhhhhhhhhhhcccCc
Confidence 34899999999999643
No 109
>3nxq_A Angiotensin-converting enzyme; dicarboxy zinc metallopeptidase, hydrolase, hydrolase-hydrol inhibitor complex; HET: RX4 NAG FUC BMA P6G PG4; 1.99A {Homo sapiens} PDB: 2xyd_A* 2c6n_A* 2c6f_A*
Probab=33.22 E-value=42 Score=38.79 Aligned_cols=55 Identities=20% Similarity=0.149 Sum_probs=35.4
Q ss_pred hhhhhhcccCcCCCCcccCCcccccccchhhccc-chHHhHHHHHHHHHHH--HHHHhCCCCCch
Q 004451 570 HNICHECCHGIGPHSITLPDGRQSTVRLELQELH-SAMEEAKADIVGLWAL--KFLIGRDLLPKS 631 (753)
Q Consensus 570 ~v~lHElgHgsGk~~~~~~~g~~~t~~~~f~~~~-s~~EEcRAe~vglyl~--~~ll~~g~~~~~ 631 (753)
.|+.||+||--.- +.- +.+. -.|.+.+ .+++|+=+|+++|-+. ++|...|+++..
T Consensus 357 ~t~hHEmGH~qy~---~~y--~~~P--~~~r~~anpgfhEAige~~slS~~Tp~hL~~igLl~~~ 414 (629)
T 3nxq_A 357 STVHHEMGHIQYY---LQY--KDLP--VSLRRGANPGFHEAIGDVLALSVSTPEHLHKIGLLDRV 414 (629)
T ss_dssp HHHHHHHHHHHHH---HHS--TTSC--GGGCSCSSHHHHHHHHHHHHHHHTSHHHHHHTTSSCCC
T ss_pred HHHHHHHHHHHHH---HHH--hcCC--ccccCCCCchHHHHHHHHHHHHcCCHHHHHHcCCcccc
Confidence 5677999994331 100 0011 1354444 6799999999999765 678789987543
No 110
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=33.21 E-value=8.2 Score=38.00 Aligned_cols=14 Identities=29% Similarity=0.546 Sum_probs=12.4
Q ss_pred hhhhhhhcccCcCC
Q 004451 569 THNICHECCHGIGP 582 (753)
Q Consensus 569 ~~v~lHElgHgsGk 582 (753)
..|+.||+||.+|-
T Consensus 134 a~~~AHElGH~lG~ 147 (208)
T 4dd8_A 134 ACTMAHEMGHNLGM 147 (208)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 47899999999995
No 111
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=30.67 E-value=9.8 Score=39.62 Aligned_cols=15 Identities=20% Similarity=0.144 Sum_probs=13.2
Q ss_pred chhhhhhhcccCcCC
Q 004451 568 FTHNICHECCHGIGP 582 (753)
Q Consensus 568 ~~~v~lHElgHgsGk 582 (753)
.+.|+.|||||.+|-
T Consensus 143 ~a~t~AHElGHnlG~ 157 (300)
T 2v4b_A 143 AAFTTAHELGHVFNM 157 (300)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred ceehhhhhhhhhcCC
Confidence 358999999999997
No 112
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=29.57 E-value=10 Score=39.80 Aligned_cols=15 Identities=13% Similarity=0.087 Sum_probs=13.3
Q ss_pred chhhhhhhcccCcCC
Q 004451 568 FTHNICHECCHGIGP 582 (753)
Q Consensus 568 ~~~v~lHElgHgsGk 582 (753)
.+.|+.|||||.+|-
T Consensus 143 ~a~t~AHElGHnlGm 157 (316)
T 2rjp_A 143 SAFTAAHQLGHVFNM 157 (316)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhcCc
Confidence 458999999999997
No 113
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=29.55 E-value=11 Score=37.38 Aligned_cols=14 Identities=29% Similarity=0.556 Sum_probs=12.8
Q ss_pred hhhhhhhcccCcCC
Q 004451 569 THNICHECCHGIGP 582 (753)
Q Consensus 569 ~~v~lHElgHgsGk 582 (753)
+.|+.|||||..|-
T Consensus 137 a~~~AHElGHnlG~ 150 (214)
T 1r55_A 137 AATMAHEIGHSLGL 150 (214)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCC
Confidence 58999999999996
No 114
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=29.51 E-value=10 Score=39.19 Aligned_cols=15 Identities=27% Similarity=0.288 Sum_probs=13.2
Q ss_pred chhhhhhhcccCcCC
Q 004451 568 FTHNICHECCHGIGP 582 (753)
Q Consensus 568 ~~~v~lHElgHgsGk 582 (753)
...|+.|||||..|-
T Consensus 188 ~a~~~AHElGHnlGm 202 (288)
T 2i47_A 188 ADLVTTHELGHNFGA 202 (288)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhcCC
Confidence 457899999999997
No 115
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=28.91 E-value=9.4 Score=35.15 Aligned_cols=14 Identities=36% Similarity=0.423 Sum_probs=12.4
Q ss_pred hhhhhhhcccCcCC
Q 004451 569 THNICHECCHGIGP 582 (753)
Q Consensus 569 ~~v~lHElgHgsGk 582 (753)
..|..||+||-+|-
T Consensus 78 ~~v~aHE~GH~LGL 91 (132)
T 1c7k_A 78 TRVTAHETGHVLGL 91 (132)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred ceEEeeeehhccCC
Confidence 47999999999996
No 116
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=28.18 E-value=10 Score=40.84 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.2
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
..+|++||+||.+|-.+
T Consensus 107 ~~~~~~HE~gH~lGl~h 123 (365)
T 3ba0_A 107 LFLTAVHEIGHSLGLGH 123 (365)
T ss_dssp SSHHHHHHHHHHHTCCC
T ss_pred ceeehhhhhhhhhcCCC
Confidence 45899999999999644
No 117
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=27.48 E-value=12 Score=40.36 Aligned_cols=16 Identities=25% Similarity=0.362 Sum_probs=13.6
Q ss_pred chhhhhhhcccCcCCC
Q 004451 568 FTHNICHECCHGIGPH 583 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~ 583 (753)
.+.|++|||||.+|-.
T Consensus 143 ~a~~~AHElGHnlGm~ 158 (378)
T 2rjq_A 143 AAFTVAHEIGHLLGLS 158 (378)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred hhhhhhhhhhhhcCcc
Confidence 4589999999999973
No 118
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=26.99 E-value=12 Score=41.01 Aligned_cols=16 Identities=19% Similarity=0.248 Sum_probs=13.6
Q ss_pred hhhhhhhcccCcCCCC
Q 004451 569 THNICHECCHGIGPHS 584 (753)
Q Consensus 569 ~~v~lHElgHgsGk~~ 584 (753)
.+|+.||+||.+|-.+
T Consensus 367 ~~va~HE~GHaLGL~H 382 (421)
T 1eak_A 367 FLVAAHQFGHAMGLEH 382 (421)
T ss_dssp HHHHHHHHHHHTTCCC
T ss_pred hhhhhhhhhhccCCCC
Confidence 4899999999999643
No 119
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=25.72 E-value=12 Score=36.72 Aligned_cols=19 Identities=21% Similarity=0.221 Sum_probs=15.3
Q ss_pred chhhhhhhcccCcCCCCcc
Q 004451 568 FTHNICHECCHGIGPHSIT 586 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~~~ 586 (753)
...|++||+||.+|-.+..
T Consensus 93 ~~g~i~HEl~HaLGf~HEh 111 (199)
T 3lqb_A 93 YSGIAQHELNHALGFYHEQ 111 (199)
T ss_dssp SHHHHHHHHHHHHTCCCGG
T ss_pred ccchHHHHHHHHhccceee
Confidence 3589999999999986543
No 120
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=24.81 E-value=13 Score=36.51 Aligned_cols=19 Identities=21% Similarity=0.074 Sum_probs=15.2
Q ss_pred chhhhhhhcccCcCCCCcc
Q 004451 568 FTHNICHECCHGIGPHSIT 586 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~~~ 586 (753)
...+++|||||.+|-.+..
T Consensus 87 ~~g~i~HEl~HalGf~HE~ 105 (201)
T 3edh_A 87 KFGIVVHELGHVVGFWHEH 105 (201)
T ss_dssp SHHHHHHHHHHHHTBCCGG
T ss_pred ccchhHHHHHHHhcchhhh
Confidence 3579999999999985543
No 121
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=24.02 E-value=15 Score=40.04 Aligned_cols=15 Identities=33% Similarity=0.530 Sum_probs=13.0
Q ss_pred chhhhhhhcccCcCC
Q 004451 568 FTHNICHECCHGIGP 582 (753)
Q Consensus 568 ~~~v~lHElgHgsGk 582 (753)
.+.|+.|||||.+|-
T Consensus 139 ~a~t~AHElGHnlGm 153 (397)
T 3k7n_A 139 VASTITHELGHNLGI 153 (397)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hhhhHHHHHHHHcCC
Confidence 457899999999996
No 122
>4axq_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.40A {Archaeoglobus fulgidus} PDB: 2xhq_A 3zvs_A 4a3w_A*
Probab=23.67 E-value=15 Score=34.99 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=13.4
Q ss_pred chhhhhhhcccCcCCC
Q 004451 568 FTHNICHECCHGIGPH 583 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~ 583 (753)
...++.||+||-.|-.
T Consensus 114 ~~k~~~HElGH~lGL~ 129 (163)
T 4axq_A 114 VVKEAVHEIGHVLGLK 129 (163)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCC
Confidence 4478999999999963
No 123
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=23.65 E-value=18 Score=39.87 Aligned_cols=15 Identities=27% Similarity=0.405 Sum_probs=12.9
Q ss_pred hhhhhhhcccCcCCC
Q 004451 569 THNICHECCHGIGPH 583 (753)
Q Consensus 569 ~~v~lHElgHgsGk~ 583 (753)
..|+.|||||.+|-.
T Consensus 140 a~t~AHElGHnlGm~ 154 (427)
T 2e3x_A 140 AVIMAHELSHNLGMY 154 (427)
T ss_dssp HHHHHHHHHHTTTCC
T ss_pred eeehHHHHHHhhCCc
Confidence 468999999999973
No 124
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=23.52 E-value=16 Score=40.58 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=14.2
Q ss_pred chhhhhhhcccCcCCCC
Q 004451 568 FTHNICHECCHGIGPHS 584 (753)
Q Consensus 568 ~~~v~lHElgHgsGk~~ 584 (753)
..+|++||+||.+|-.+
T Consensus 193 l~~v~~HE~GH~lGl~H 209 (450)
T 1su3_A 193 LHRVAAHELGHSLGLSH 209 (450)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hhchhhhHHHHhccCCC
Confidence 35999999999999643
No 125
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=22.93 E-value=16 Score=40.11 Aligned_cols=15 Identities=27% Similarity=0.492 Sum_probs=13.1
Q ss_pred chhhhhhhcccCcCC
Q 004451 568 FTHNICHECCHGIGP 582 (753)
Q Consensus 568 ~~~v~lHElgHgsGk 582 (753)
.+.|+.|||||.+|-
T Consensus 144 ~a~t~AHElGHnlGm 158 (422)
T 3k7l_A 144 VAITMAHEMGHNLGM 158 (422)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHcCC
Confidence 457899999999996
No 126
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=22.50 E-value=17 Score=40.01 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=13.0
Q ss_pred hhhhhhhcccCcCCC
Q 004451 569 THNICHECCHGIGPH 583 (753)
Q Consensus 569 ~~v~lHElgHgsGk~ 583 (753)
..|+.|||||.+|-.
T Consensus 147 a~t~AHElGHnlG~~ 161 (427)
T 2ero_A 147 AIAMAHEMGHNLGMD 161 (427)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCc
Confidence 478999999999973
No 127
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=21.78 E-value=18 Score=39.74 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=12.9
Q ss_pred hhhhhhhcccCcCCC
Q 004451 569 THNICHECCHGIGPH 583 (753)
Q Consensus 569 ~~v~lHElgHgsGk~ 583 (753)
..|+.|||||.+|-.
T Consensus 138 a~t~AHElGHnlG~~ 152 (419)
T 2dw0_A 138 AVIMAHEMGHNLGIN 152 (419)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred hhhHHHHHHHHcCCc
Confidence 478999999999973
Done!