BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004452
         (753 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q99L90|MCRS1_MOUSE Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1
          Length = 462

 Score = 56.6 bits (135), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 10/117 (8%)

Query: 627 DDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY--MQRAIL 684
           D V  FSD E +I D  L      + E E++       +R I +LEQ  H +  +  +I 
Sbjct: 276 DQVLNFSDAEDLIDDSKLKDMRDEVLEHELTVADRRQ-KREIRQLEQELHKWQVLVDSIT 334

Query: 685 SHGA-------FAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
             G+        A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct: 335 GMGSPDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 391


>sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1 OS=Homo sapiens GN=MCRS1 PE=1 SV=1
          Length = 462

 Score = 54.7 bits (130), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 10/117 (8%)

Query: 627 DDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY-------- 678
           D V  FSD E +I D  L      + E E+        +R I +LEQ  H +        
Sbjct: 276 DQVLNFSDAEDLIDDSKLKDMRDEVLEHELMVADRRQ-KREIRQLEQELHKWQVLVDSIT 334

Query: 679 -MQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
            M      +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct: 335 GMSSPDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 391


>sp|Q5R9A7|GP155_PONAB Integral membrane protein GPR155 OS=Pongo abelii GN=GPR155 PE=2
           SV=1
          Length = 872

 Score = 35.8 bits (81), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 599 GSLHIPDAEPIMNPSTTEPEDPSVESDDDDV 629
           G LH P  EPI N ST+EP  PS E ++  V
Sbjct: 602 GELHCPSIEPIANTSTSEPVIPSFEKNNHCV 632


>sp|Q7Z3F1|GP155_HUMAN Integral membrane protein GPR155 OS=Homo sapiens GN=GPR155 PE=2
           SV=2
          Length = 870

 Score = 35.8 bits (81), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 599 GSLHIPDAEPIMNPSTTEPEDPSVESDDDDV 629
           G LH P  EPI N ST+EP  PS E ++  V
Sbjct: 600 GELHCPSIEPIANTSTSEPVIPSFEKNNHCV 630


>sp|O34433|YOBO_BACSU Putative phage-related protein YobO OS=Bacillus subtilis (strain
           168) GN=yobO PE=4 SV=1
          Length = 806

 Score = 34.3 bits (77), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 17/134 (12%)

Query: 332 KEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVES----VENV 387
           KE +DK YY  LS +    N A    +P     T      + N      V +    V+ +
Sbjct: 64  KERLDKEYYRLLSKITREVNVADFGAVPDGRDNTEAFRKAIGNGRVKVHVPAGEYLVQGI 123

Query: 388 QLPSPATVSDPQFPEQNDGIMICTLNTEDPE---IPCNDDAFLPN-NLLPSSVSI----A 439
           +LPS  T+       Q  GI +  L+ + P    +  NDD    N N+    +S+    +
Sbjct: 124 KLPSWTTIVG-----QGKGITVIKLHEDTPAHEWVITNDDYQNGNRNIFVQGMSLDWNPS 178

Query: 440 KRQNFKDAGNPFSS 453
           ++   ++ G  FSS
Sbjct: 179 RQCGVRNPGGQFSS 192


>sp|Q4JXD1|Y374_CORJK UPF0678 fatty acid-binding protein-like protein jk0374
           OS=Corynebacterium jeikeium (strain K411) GN=jk0374 PE=3
           SV=1
          Length = 213

 Score = 33.5 bits (75), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 17/97 (17%)

Query: 103 KFPDIPM-DDDASCRDGPTLH-------------RFHGGFDHPGEEDFSMQQGEMHEEIP 148
           +F D+P+ DD A+ R GP LH             R  G    PGEE+F+  Q  +     
Sbjct: 34  EFGDMPIPDDTANLRKGPNLHDGLLALLPLIGVWRGQGQAAPPGEEEFTFGQQVV---FA 90

Query: 149 HIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEAN 185
           H  E   S+     R+ + G P ++P+  E+  +  N
Sbjct: 91  HDGENRISYDSRTWRMDDDGKPTEIPDRRESGFLRIN 127


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.132    0.388 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 310,115,119
Number of Sequences: 539616
Number of extensions: 14707954
Number of successful extensions: 26177
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 26165
Number of HSP's gapped (non-prelim): 35
length of query: 753
length of database: 191,569,459
effective HSP length: 125
effective length of query: 628
effective length of database: 124,117,459
effective search space: 77945764252
effective search space used: 77945764252
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)